chr1	14364	29359	14364	29359	-	transcript7.chr1.nnic@WASH7P	transcript7.chr1.nnic	unprocessed_pseudogene	29321,24738,18268,17915,17233,16858,16607,15796,14970,14364	29359,24891,18366,18061,17742,17055,16765,15947,15038,14829	Gene ID= ENSG00000227232.5 TPM= 5.79 Transcript Type= NA
chr1	184872	199875	184872	199875	-	transcript9.chr1.nnic@FO538757.1	transcript9.chr1.nnic	unprocessed_pseudogene	199837,195263,188439,188130,187755,187376,187129,186317,185491,184872	199875,195416,188584,188266,187890,187577,187287,186469,185559,185350	Gene ID= ENSG00000279457.4 TPM= 1.93 Transcript Type= NA
chr1	184872	199875	184872	199875	-	transcript10.chr1.nnic@FO538757.1	transcript10.chr1.nnic	unprocessed_pseudogene	199837,195263,188791,188439,187755,187376,187129,186317,185491,184872	199875,195416,188889,188584,188266,187577,187287,186469,185559,185350	Gene ID= ENSG00000279457.4 TPM= 2.9 Transcript Type= NA
chr1	826206	827522	826206	827522	-	ENST00000473798.1@LINC00115	ENST00000473798.1	lincRNA	826206	827522	Gene ID= ENSG00000225880.5 TPM= 5.79 Transcript Type= lincRNA
chr1	827659	854387	827659	854387	+	transcript24.chr1.nnic@LINC01128	transcript24.chr1.nnic	processed_transcript	827659,829003,847654,851927,852671,853391,853528	827775,829104,847806,852110,852766,853478,854387	Gene ID= ENSG00000228794.8 TPM= 4.1 Transcript Type= NA
chr1	827800	854387	827800	854387	+	transcript27.chr1.nnic@LINC01128	transcript27.chr1.nnic	processed_transcript	827800,829003,847654,851927,852671,853391,853528	827853,829104,847806,852110,852766,853478,854387	Gene ID= ENSG00000228794.8 TPM= 2.17 Transcript Type= NA
chr1	827598	854387	827598	854387	+	transcript31.chr1.nnic@LINC01128	transcript31.chr1.nnic	processed_transcript	827598,829003,851927,852671,853391,853528	827775,829104,852110,852766,853478,854387	Gene ID= ENSG00000228794.8 TPM= 5.07 Transcript Type= NA
chr1	827598	854387	827598	854387	+	transcript33.chr1.nnic@LINC01128	transcript33.chr1.nnic	processed_transcript	827598,829003,851927,853391,853528	827775,829104,852110,853478,854387	Gene ID= ENSG00000228794.8 TPM= 4.1 Transcript Type= NA
chr1	944204	959295	944204	959295	-	transcript47.chr1.nic@NOC2L	transcript47.chr1.nic	protein_coding	959215,958929,957099,956894,956095,955923,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945042,944204	959295,959081,957273,957025,956215,956013,954082,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800	Gene ID= ENSG00000188976.10 TPM= 210.47 Transcript Type= NA
chr1	944204	959290	944204	959290	-	ENST00000327044.6@NOC2L	ENST00000327044.6	protein_coding	959215,958929,957099,956894,956095,955923,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945057,944204	959290,959081,957273,957025,956215,956013,954082,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800	Gene ID= ENSG00000188976.10 TPM= 498.29 Transcript Type= protein_coding
chr1	958246	959256	958246	959256	-	ENST00000469563.1@NOC2L	ENST00000469563.1	protein_coding	959215,958246	959256,959081	Gene ID= ENSG00000188976.10 TPM= 2.9 Transcript Type= retained_intron
chr1	960587	965715	960587	965715	+	ENST00000338591.7@KLHL17	ENST00000338591.7	protein_coding	960587,961293,961629,961826,962355,962704,963109,963337,963920,964107,964349,964963	960800,961552,961750,962047,962471,962917,963253,963504,964008,964180,964530,965715	Gene ID= ENSG00000187961.13 TPM= 2.9 Transcript Type= protein_coding
chr1	975204	982136	975204	982136	-	transcript78.chr1.nnic@PERM1	transcript78.chr1.nnic	protein_coding	982065,978881,976499,975204	982136,981173,976558,976269	Gene ID= ENSG00000187642.9 TPM= 20.91 Transcript Type= NA
chr1	975204	982378	975204	982378	-	transcript87.chr1.nic@PERM1	transcript87.chr1.nic	protein_coding	982065,978881,976499,975204	982378,981173,976624,976269	Gene ID= ENSG00000187642.9 TPM= 228.4 Transcript Type= NA
chr1	975204	982111	975204	982111	-	transcript89.chr1.nnic@PERM1	transcript89.chr1.nnic	protein_coding	982065,978881,976499,975204	982111,981224,976624,976269	Gene ID= ENSG00000187642.9 TPM= 94.47 Transcript Type= NA
chr1	975204	982136	975204	982136	-	transcript90.chr1.nnic@PERM1	transcript90.chr1.nnic	protein_coding	982065,979056,976499,975204	982136,981173,976624,976269	Gene ID= ENSG00000187642.9 TPM= 14.3 Transcript Type= NA
chr1	975199	982378	975199	982378	-	transcript93.chr1.nic@PERM1	transcript93.chr1.nic	protein_coding	982065,978881,975199	982378,981173,976624	Gene ID= ENSG00000187642.9 TPM= 60.49 Transcript Type= NA
chr1	975205	981029	975205	981029	-	ENST00000433179.3@PERM1	ENST00000433179.3	protein_coding	978881,976499,975205	981029,976624,976269	Gene ID= ENSG00000187642.9 TPM= 98.08 Transcript Type= protein_coding
chr1	975205	976641	975205	976641	-	ENST00000479361.1@PERM1	ENST00000479361.1	protein_coding	976499,975205	976641,976269	Gene ID= ENSG00000187642.9 TPM= 135.14 Transcript Type= retained_intron
chr1	998964	1000111	998964	1000111	-	ENST00000304952.10@HES4	ENST00000304952.10	protein_coding	999866,999692,999526,998964	1000111,999787,999613,999432	Gene ID= ENSG00000188290.10 TPM= 7.72 Transcript Type= protein_coding
chr1	998966	1000096	998966	1000096	-	ENST00000481869.1@HES4	ENST00000481869.1	protein_coding	999526,998966	1000096,999432	Gene ID= ENSG00000188290.10 TPM= 4.83 Transcript Type= retained_intron
chr1	998962	1000172	998962	1000172	-	ENST00000428771.6@HES4	ENST00000428771.6	protein_coding	999692,999526,998962	1000172,999613,999432	Gene ID= ENSG00000188290.10 TPM= 14.48 Transcript Type= protein_coding
chr1	1013423	1014540	1013423	1014540	+	ENST00000379389.4@ISG15	ENST00000379389.4	protein_coding	1013423,1013984	1013576,1014540	Gene ID= ENSG00000187608.8 TPM= 9.65 Transcript Type= protein_coding
chr1	1020123	1056116	1020123	1056116	+	ENST00000379370.6@AGRN	ENST00000379370.6	protein_coding	1020123,1022201,1035277,1040665,1041173,1041478,1041956,1043239,1043538,1043823,1044109,1044334,1045161,1045359,1045733,1045964,1046160,1046397,1046820,1047327,1047573,1047776,1048012,1048867,1049236,1049566,1049903,1050233,1050427,1050726,1051253,1051453,1051728,1053753,1054448,1054824	1020373,1022462,1035324,1040880,1041397,1041702,1042162,1043457,1043732,1044023,1044257,1044439,1045277,1045523,1045876,1046088,1046265,1046735,1046957,1047454,1047687,1047895,1048365,1049059,1049451,1049795,1050037,1050329,1050591,1050837,1051369,1051645,1051815,1053977,1054551,1056116	Gene ID= ENSG00000188157.14 TPM= 4.83 Transcript Type= protein_coding
chr1	1081823	1116098	1081823	1116098	-	ENST00000421241.6@C1orf159	ENST00000421241.6	protein_coding	1116060,1091991,1091472,1090353,1087502,1087139,1085878,1084481,1084353,1081823	1116098,1092103,1091565,1090428,1087597,1087204,1086012,1084506,1084383,1082987	Gene ID= ENSG00000131591.17 TPM= 3.86 Transcript Type= protein_coding
chr1	1211326	1214132	1211326	1214132	-	ENST00000379236.3@TNFRSF4	ENST00000379236.3	protein_coding	1213983,1213663,1212992,1212638,1211942,1211704,1211326	1214132,1213785,1213093,1212704,1212138,1211832,1211625	Gene ID= ENSG00000186827.10 TPM= 3.86 Transcript Type= protein_coding
chr1	1216932	1232078	1216932	1232078	-	transcript121.chr1.nnic@SDF4	transcript121.chr1.nnic	protein_coding	1231892,1228468,1223832,1223244,1218769,1218458,1216932	1232078,1228946,1223968,1223357,1220730,1218633,1217688	Gene ID= ENSG00000078808.16 TPM= 10.03 Transcript Type= NA
chr1	1216908	1232001	1216908	1232001	-	ENST00000360001.10@SDF4	ENST00000360001.10	protein_coding	1231892,1228468,1223832,1223244,1218769,1218458,1216908	1232001,1228946,1223968,1223357,1218927,1218633,1217688	Gene ID= ENSG00000078808.16 TPM= 247.78 Transcript Type= protein_coding
chr1	1216931	1232031	1216931	1232031	-	ENST00000263741.11@SDF4	ENST00000263741.11	protein_coding	1231892,1228468,1223832,1223244,1218769,1218458,1216931	1232031,1228946,1223968,1223357,1218927,1218633,1217804	Gene ID= ENSG00000078808.16 TPM= 17.07 Transcript Type= protein_coding
chr1	1216934	1220293	1216934	1220293	-	ENST00000478938.1@SDF4	ENST00000478938.1	protein_coding	1218458,1216934	1220293,1217688	Gene ID= ENSG00000078808.16 TPM= 4.46 Transcript Type= retained_intron
chr1	1232265	1235041	1232265	1235041	+	ENST00000379198.3@B3GALT6	ENST00000379198.3	protein_coding	1232265	1235041	Gene ID= ENSG00000176022.4 TPM= 57.92 Transcript Type= protein_coding
chr1	1254470	1273885	1254470	1273885	-	ENST00000349431.10@UBE2J2	ENST00000349431.10	protein_coding	1273666,1267862,1263346,1257208,1256992,1256045,1254470	1273885,1267992,1263386,1257310,1257130,1256125,1255487	Gene ID= ENSG00000160087.20 TPM= 53.09 Transcript Type= protein_coding
chr1	1268319	1269576	1268319	1269576	+	transcript156.chr1.nnic@NA	transcript156.chr1.nnic	NA	1268319	1269576	Gene ID= novel_gene_chr1_157 TPM= 1.93 Transcript Type= NA
chr1	1292390	1307918	1292390	1307918	-	transcript167.chr1.nic@ACAP3	transcript167.chr1.nic	protein_coding	1307769,1304086,1303162,1302922,1301988,1300509,1300158,1299973,1299831,1299345,1298567,1298370,1298013,1297822,1296425,1296211,1296015,1295736,1295447,1294402,1294090,1293823,1292390	1307918,1304143,1303281,1302975,1302046,1300692,1300202,1300068,1299905,1299356,1298679,1298421,1298113,1297933,1296633,1296280,1296109,1295938,1295554,1294628,1294199,1293933,1293708	Gene ID= ENSG00000131584.18 TPM= 8.69 Transcript Type= NA
chr1	1308636	1311676	1308636	1311676	+	transcript198.chr1.nic@PUSL1	transcript198.chr1.nic	protein_coding	1308636,1309086,1309454,1309681,1310634,1310909,1311330	1308972,1309273,1309603,1309851,1310688,1311071,1311676	Gene ID= ENSG00000169972.11 TPM= 1.93 Transcript Type= NA
chr1	1308567	1311677	1308567	1311677	+	ENST00000379031.9@PUSL1	ENST00000379031.9	protein_coding	1308567,1308915,1309086,1309454,1309681,1310634,1310909,1311330	1308720,1308972,1309273,1309603,1309851,1310688,1311071,1311677	Gene ID= ENSG00000169972.11 TPM= 2.9 Transcript Type= protein_coding
chr1	1311600	1324676	1311600	1324676	-	transcript180.chr1.nic@INTS11	transcript180.chr1.nic	protein_coding	1324581,1323147,1320996,1320456,1319296,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312593,1312440,1312226,1312018,1311600	1324676,1323287,1321093,1320529,1319524,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312700,1312501,1312368,1312147,1311924	Gene ID= ENSG00000127054.20 TPM= 16.83 Transcript Type= NA
chr1	1311597	1324691	1311597	1324691	-	ENST00000435064.5@INTS11	ENST00000435064.5	protein_coding	1324581,1320996,1320456,1319296,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312593,1312440,1312226,1312018,1311597	1324691,1321093,1320529,1319524,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312700,1312501,1312368,1312147,1311924	Gene ID= ENSG00000127054.20 TPM= 80.54 Transcript Type= protein_coding
chr1	1311600	1324680	1311600	1324680	-	transcript187.chr1.nic@INTS11	transcript187.chr1.nic	protein_coding	1324581,1320996,1320456,1319296,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312593,1312440,1312226,1312018,1311600	1324680,1321093,1320529,1319524,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312501,1312368,1312147,1311924	Gene ID= ENSG00000127054.20 TPM= 4.92 Transcript Type= NA
chr1	1311600	1324680	1311600	1324680	-	transcript190.chr1.nnic@INTS11	transcript190.chr1.nnic	protein_coding	1324581,1320996,1320456,1319296,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312440,1312226,1312018,1311600	1324680,1321093,1320529,1319524,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312501,1312368,1312147,1311924	Gene ID= ENSG00000127054.20 TPM= 6.37 Transcript Type= NA
chr1	1318679	1324666	1318679	1324666	-	ENST00000429572.5@INTS11	ENST00000429572.5	protein_coding	1324581,1320996,1320456,1318679	1324666,1321093,1320529,1319524	Gene ID= ENSG00000127054.20 TPM= 2.9 Transcript Type= protein_coding
chr1	1324767	1328897	1324767	1328897	+	ENST00000343938.8@CPTP	ENST00000343938.8	protein_coding	1324767,1326836,1327241	1325102,1327032,1328897	Gene ID= ENSG00000224051.6 TPM= 43.44 Transcript Type= protein_coding
chr1	1335278	1349417	1335278	1349417	-	transcript208.chr1.nic@DVL1	transcript208.chr1.nic	protein_coding	1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339362,1338522,1338269,1337977,1337018,1335278	1349417,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1337055,1336515	Gene ID= ENSG00000107404.19 TPM= 23.65 Transcript Type= NA
chr1	1335276	1349350	1335276	1349350	-	ENST00000378888.9@DVL1	ENST00000378888.9	protein_coding	1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339287,1338522,1338269,1337977,1335276	1349350,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1336515	Gene ID= ENSG00000107404.19 TPM= 45.01 Transcript Type= protein_coding
chr1	1335276	1349112	1335276	1349112	-	ENST00000378891.9@DVL1	ENST00000378891.9	protein_coding	1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339362,1338522,1338269,1337977,1335276	1349112,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1336515	Gene ID= ENSG00000107404.19 TPM= 112.58 Transcript Type= protein_coding
chr1	1352689	1358794	1352689	1358794	-	ENST00000342753.8@MXRA8	ENST00000342753.8	protein_coding	1358456,1356681,1355244,1354682,1354354,1354193,1354030,1353848,1352689	1358794,1356704,1355345,1355152,1354509,1354232,1354106,1353928,1353629	Gene ID= ENSG00000162576.16 TPM= 3.06 Transcript Type= protein_coding
chr1	1352691	1358563	1352691	1358563	-	transcript243.chr1.nic@MXRA8	transcript243.chr1.nic	protein_coding	1358456,1356681,1355450,1355244,1354682,1354193,1354030,1353848,1352691	1358563,1356704,1355752,1355345,1355152,1354509,1354106,1353928,1353629	Gene ID= ENSG00000162576.16 TPM= 4.51 Transcript Type= NA
chr1	1352691	1358535	1352691	1358535	-	ENST00000309212.10@MXRA8	ENST00000309212.10	protein_coding	1358456,1356681,1355450,1355244,1354682,1354354,1354193,1354030,1353848,1352691	1358535,1356704,1355752,1355345,1355152,1354509,1354232,1354106,1353928,1353629	Gene ID= ENSG00000162576.16 TPM= 22.37 Transcript Type= protein_coding
chr1	1352692	1358543	1352692	1358543	-	ENST00000445648.5@MXRA8	ENST00000445648.5	protein_coding	1358456,1356681,1355450,1355244,1354682,1354354,1354193,1354030,1353848,1352692	1358543,1356704,1355752,1355345,1355152,1354509,1354232,1354106,1353946,1353332	Gene ID= ENSG00000162576.16 TPM= 1.93 Transcript Type= protein_coding
chr1	1373730	1375495	1373730	1375495	-	ENST00000338338.9@AURKAIP1	ENST00000338338.9	protein_coding	1375154,1374705,1374000,1373730	1375495,1374790,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 136.25 Transcript Type= protein_coding
chr1	1373737	1375173	1373737	1375173	-	ENST00000378853.3@AURKAIP1	ENST00000378853.3	protein_coding	1374997,1374705,1374000,1373737	1375173,1374790,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 88.63 Transcript Type= protein_coding
chr1	1373732	1375169	1373732	1375169	-	ENST00000321751.9@AURKAIP1	ENST00000321751.9	protein_coding	1375075,1374705,1374000,1373732	1375169,1374790,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 22.03 Transcript Type= protein_coding
chr1	1373730	1375157	1373730	1375157	-	ENST00000338370.7@AURKAIP1	ENST00000338370.7	protein_coding	1374705,1374000,1373730	1375157,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 31.03 Transcript Type= protein_coding
chr1	1386708	1399363	1386708	1399363	-	transcript254.chr1.nic@CCNL2	transcript254.chr1.nic	protein_coding	1399019,1398597,1398233,1395394,1393396,1390766,1390459,1390230,1388626,1388492,1387954,1387777,1386708	1399363,1398671,1398342,1395514,1393460,1392803,1390563,1390371,1388743,1388510,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 2.25 Transcript Type= NA
chr1	1386708	1399363	1386708	1399363	-	transcript260.chr1.nic@CCNL2	transcript260.chr1.nic	protein_coding	1399019,1398597,1398233,1395394,1393396,1392679,1390766,1390459,1390230,1387954,1387777,1386708	1399363,1398671,1398342,1395514,1393460,1392803,1391575,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 1.93 Transcript Type= NA
chr1	1386502	1399311	1386502	1399311	-	transcript262.chr1.nic@CCNL2	transcript262.chr1.nic	protein_coding	1399019,1398597,1398233,1395394,1393396,1390766,1390459,1390230,1387954,1387777,1386502	1399311,1398671,1398342,1395514,1393460,1392803,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 6.11 Transcript Type= NA
chr1	1385711	1391096	1385711	1391096	-	ENST00000480479.5@CCNL2	ENST00000480479.5	protein_coding	1390766,1390459,1390230,1388626,1388492,1387954,1387777,1385711	1391096,1390563,1390371,1388743,1388510,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 5.79 Transcript Type= retained_intron
chr1	1386495	1399312	1386495	1399312	-	ENST00000400809.7@CCNL2	ENST00000400809.7	protein_coding	1399019,1398597,1398233,1395394,1393396,1390766,1390459,1390230,1387954,1387777,1386495	1399312,1398671,1398342,1395514,1393460,1390865,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 8.69 Transcript Type= protein_coding
chr1	1392288	1399317	1392288	1399317	-	ENST00000408918.8@CCNL2	ENST00000408918.8	protein_coding	1399019,1398597,1398233,1395394,1393396,1392288	1399317,1398671,1398342,1395514,1393460,1392803	Gene ID= ENSG00000221978.11 TPM= 9.65 Transcript Type= protein_coding
chr1	1399527	1402046	1399527	1402046	+	ENST00000444362.2@AL391244.1	ENST00000444362.2	processed_transcript	1399527,1400158,1400605	1399685,1400303,1402046	Gene ID= ENSG00000224870.6 TPM= 18.82 Transcript Type= antisense_RNA
chr1	1399530	1402026	1399530	1402026	+	ENST00000418833.2@AL391244.1	ENST00000418833.2	processed_transcript	1399530,1400605	1400303,1402026	Gene ID= ENSG00000224870.6 TPM= 4.34 Transcript Type= retained_intron
chr1	1401913	1407309	1401913	1407309	-	transcript275.chr1.nic@MRPL20	transcript275.chr1.nic	protein_coding	1407131,1406909,1406226,1405809,1401913	1407309,1407019,1406346,1405886,1402256	Gene ID= ENSG00000242485.5 TPM= 5.79 Transcript Type= NA
chr1	1401908	1407313	1401908	1407313	-	ENST00000344843.11@MRPL20	ENST00000344843.11	protein_coding	1407131,1406909,1405809,1401908	1407313,1407019,1405886,1402256	Gene ID= ENSG00000242485.5 TPM= 169.89 Transcript Type= protein_coding
chr1	1418422	1421444	1418422	1421444	-	ENST00000537107.5@ANKRD65	ENST00000537107.5	protein_coding	1421133,1420797,1420052,1418422	1421444,1421005,1420592,1419549	Gene ID= ENSG00000235098.8 TPM= 11.58 Transcript Type= protein_coding
chr1	1435671	1442882	1435671	1442882	+	ENST00000476993.1@VWA1	ENST00000476993.1	protein_coding	1435671,1436927,1439081	1435821,1437484,1442882	Gene ID= ENSG00000179403.11 TPM= 19.31 Transcript Type= protein_coding
chr1	1435523	1440765	1435523	1440765	+	ENST00000338660.5@VWA1	ENST00000338660.5	protein_coding	1435523,1437322,1439081	1435821,1437484,1440765	Gene ID= ENSG00000179403.11 TPM= 6.76 Transcript Type= protein_coding
chr1	1471761	1496202	1471761	1496202	+	transcript295.chr1.nnic@ATAD3B	transcript295.chr1.nnic	protein_coding	1471761,1477274,1477751,1478644,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1489692,1490257,1490563,1495485	1472089,1477350,1477848,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1489811,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 2.25 Transcript Type= NA
chr1	1471761	1496202	1471761	1496202	+	transcript298.chr1.nnic@ATAD3B	transcript298.chr1.nnic	protein_coding	1471761,1477274,1477751,1478644,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1489692,1490563,1495485	1472089,1477350,1477848,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 8.04 Transcript Type= NA
chr1	1471761	1496202	1471761	1496202	+	transcript299.chr1.nnic@ATAD3B	transcript299.chr1.nnic	protein_coding	1471761,1477274,1477751,1478644,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485	1472089,1477350,1477848,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 2.25 Transcript Type= NA
chr1	1471761	1496202	1471761	1496202	+	transcript300.chr1.nnic@ATAD3B	transcript300.chr1.nnic	protein_coding	1471761,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1489692,1490257,1490563,1495485	1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1489811,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 3.21 Transcript Type= NA
chr1	1471761	1496202	1471761	1496202	+	transcript306.chr1.nnic@ATAD3B	transcript306.chr1.nnic	protein_coding	1471761,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485	1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 7.08 Transcript Type= NA
chr1	1471761	1496202	1471761	1496202	+	transcript308.chr1.nnic@ATAD3B	transcript308.chr1.nnic	protein_coding	1471761,1477274,1477751,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485	1472089,1477350,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 2.25 Transcript Type= NA
chr1	1471761	1483145	1471761	1483145	+	transcript312.chr1.nnic@ATAD3B	transcript312.chr1.nnic	protein_coding	1471761,1477274,1477751,1478644,1479049,1480867,1482138,1482545	1472089,1477350,1477848,1478745,1479108,1480936,1482303,1483145	Gene ID= ENSG00000160072.19 TPM= 1.93 Transcript Type= NA
chr1	1471761	1483145	1471761	1483145	+	transcript314.chr1.nnic@ATAD3B	transcript314.chr1.nnic	protein_coding	1471761,1477274,1477751,1479049,1480867,1482138,1482545	1472089,1477350,1478745,1479108,1480936,1482303,1483145	Gene ID= ENSG00000160072.19 TPM= 3.86 Transcript Type= NA
chr1	1471761	1483145	1471761	1483145	+	transcript316.chr1.nnic@ATAD3B	transcript316.chr1.nnic	protein_coding	1471761,1477274,1477751,1480867,1482138,1482545	1472089,1477350,1479108,1480936,1482303,1483145	Gene ID= ENSG00000160072.19 TPM= 1.93 Transcript Type= NA
chr1	1511283	1512009	1511283	1512009	-	transcript336.chr1.nnic@NA	transcript336.chr1.nnic	NA	1511283	1512009	Gene ID= novel_gene_chr1_337 TPM= 5.79 Transcript Type= NA
chr1	1512126	1534685	1512126	1534685	+	transcript317.chr1.nic@ATAD3A	transcript317.chr1.nic	protein_coding	1512126,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527161,1527695,1529223,1533926	1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527238,1527862,1529331,1534685	Gene ID= ENSG00000197785.13 TPM= 5.07 Transcript Type= NA
chr1	1512160	1534685	1512160	1534685	+	transcript318.chr1.nnic@ATAD3A	transcript318.chr1.nnic	protein_coding	1512160,1512326,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926	1512239,1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527862,1529331,1534685	Gene ID= ENSG00000197785.13 TPM= 9.89 Transcript Type= NA
chr1	1512151	1534685	1512151	1534685	+	ENST00000378756.7@ATAD3A	ENST00000378756.7	protein_coding	1512151,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926	1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527862,1529331,1534685	Gene ID= ENSG00000197785.13 TPM= 139.25 Transcript Type= protein_coding
chr1	1541673	1574869	1541673	1574869	-	ENST00000291386.3@SSU72	ENST00000291386.3	protein_coding	1574478,1564773,1544863,1543869,1541673	1574869,1564916,1545002,1543987,1542167	Gene ID= ENSG00000160075.11 TPM= 306.97 Transcript Type= protein_coding
chr1	1598012	1600096	1598012	1600096	-	ENST00000422725.3@FNDC10	ENST00000422725.3	protein_coding	1598012	1600096	Gene ID= ENSG00000228594.3 TPM= 10.62 Transcript Type= protein_coding
chr1	1613758	1615795	1613758	1615795	-	ENST00000607222.1@AL691432.2	ENST00000607222.1	antisense_RNA	1613758	1615795	Gene ID= ENSG00000272106.1 TPM= 54.06 Transcript Type= antisense_RNA
chr1	1615829	1630605	1615829	1630605	+	transcript351.chr1.nnic@MIB2	transcript351.chr1.nnic	protein_coding	1615829,1616508,1617352,1623431,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1616100,1616614,1617515,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 12.38 Transcript Type= NA
chr1	1615415	1630605	1615415	1630605	+	ENST00000520777.5@MIB2	ENST00000520777.5	protein_coding	1615415,1616508,1623389,1623774,1624795,1624991,1625286,1625558,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 6.11 Transcript Type= protein_coding
chr1	1615421	1630610	1615421	1630610	+	ENST00000355826.9@MIB2	ENST00000355826.9	protein_coding	1615421,1616508,1623431,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630610	Gene ID= ENSG00000197530.12 TPM= 37.44 Transcript Type= protein_coding
chr1	1615829	1630605	1615829	1630605	+	transcript376.chr1.nic@MIB2	transcript376.chr1.nic	protein_coding	1615829,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1616100,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 15.27 Transcript Type= NA
chr1	1615829	1630605	1615829	1630605	+	transcript383.chr1.nic@MIB2	transcript383.chr1.nic	protein_coding	1615829,1616508,1623431,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1616100,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 53.88 Transcript Type= NA
chr1	1615829	1630605	1615829	1630605	+	transcript410.chr1.nic@MIB2	transcript410.chr1.nic	protein_coding	1615829,1616508,1623389,1623774,1624795,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1616100,1616614,1623482,1623945,1624901,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 12.33 Transcript Type= NA
chr1	1615829	1630605	1615829	1630605	+	transcript419.chr1.nic@MIB2	transcript419.chr1.nic	protein_coding	1615829,1616508,1623431,1623774,1624795,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1616100,1616614,1623699,1623945,1624901,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 11.84 Transcript Type= NA
chr1	1615443	1630605	1615443	1630605	+	ENST00000505820.6@MIB2	ENST00000505820.6	protein_coding	1615443,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 12.69 Transcript Type= protein_coding
chr1	1615454	1630604	1615454	1630604	+	ENST00000479659.5@MIB2	ENST00000479659.5	protein_coding	1615454,1616508,1623431,1623774,1624795,1624991,1625286,1625546,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623699,1623945,1624901,1625185,1625428,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630604	Gene ID= ENSG00000197530.12 TPM= 3.48 Transcript Type= retained_intron
chr1	1615437	1630605	1615437	1630605	+	ENST00000518681.5@MIB2	ENST00000518681.5	protein_coding	1615437,1616508,1623389,1623774,1624795,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623699,1623945,1624901,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 6.85 Transcript Type= protein_coding
chr1	1615496	1630604	1615496	1630604	+	ENST00000489635.5@MIB2	ENST00000489635.5	protein_coding	1615496,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623482,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630604	Gene ID= ENSG00000197530.12 TPM= 3.6 Transcript Type= nonsense_mediated_decay
chr1	1616310	1630604	1616310	1630604	+	ENST00000504599.5@MIB2	ENST00000504599.5	protein_coding	1616310,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630604	Gene ID= ENSG00000197530.12 TPM= 3.23 Transcript Type= protein_coding
chr1	1642386	1659008	1642386	1659008	-	transcript466.chr1.nic@CDK11B	transcript466.chr1.nic	protein_coding	1658914,1657375,1655369,1652439,1649499,1645126,1642386	1659008,1657498,1655484,1652566,1649637,1645262,1642508	Gene ID= ENSG00000248333.8 TPM= 4.83 Transcript Type= NA
chr1	1652488	1658982	1652488	1658982	-	transcript478.chr1.nic@CDK11B	transcript478.chr1.nic	protein_coding	1658914,1657375,1657256,1655369,1652488	1658982,1657498,1657302,1655484,1652566	Gene ID= ENSG00000248333.8 TPM= 2.9 Transcript Type= NA
chr1	1661479	1692728	1661479	1692728	-	ENST00000611123.1@SLC35E2B	ENST00000611123.1	protein_coding	1692449,1676378,1676064,1675463,1671509,1670098,1669664,1668327,1661479	1692728,1676846,1676199,1675590,1671629,1670151,1669736,1668472,1666019	Gene ID= ENSG00000189339.11 TPM= 27.51 Transcript Type= protein_coding
chr1	1670425	1692709	1670425	1692709	-	ENST00000481276.1@SLC35E2B	ENST00000481276.1	protein_coding	1692449,1676378,1676064,1675463,1670425	1692709,1676846,1676199,1675590,1671629	Gene ID= ENSG00000189339.11 TPM= 1.45 Transcript Type= retained_intron
chr1	1729864	1731395	1729864	1731395	+	transcript491.chr1.nnic@NA	transcript491.chr1.nnic	NA	1729864	1731395	Gene ID= novel_gene_chr1_492 TPM= 21.24 Transcript Type= NA
chr1	1751232	1778477	1751232	1778477	-	transcript503.chr1.nic@NADK	transcript503.chr1.nic	protein_coding	1778289,1765228,1761952,1757181,1756503,1756258,1755374,1754544,1754284,1753567,1751232	1778477,1765446,1762035,1757310,1756608,1756343,1755476,1754698,1754383,1753649,1753060	Gene ID= ENSG00000008130.15 TPM= 4.83 Transcript Type= NA
chr1	1751232	1778470	1751232	1778470	-	ENST00000341426.9@NADK	ENST00000341426.9	protein_coding	1778289,1765228,1761952,1757181,1756503,1756258,1755374,1754544,1754284,1754051,1753567,1751232	1778470,1765446,1762035,1757310,1756608,1756343,1755476,1754698,1754383,1754208,1753649,1753060	Gene ID= ENSG00000008130.15 TPM= 20.27 Transcript Type= protein_coding
chr1	1785285	1891117	1785285	1891117	-	ENST00000610897.4@GNB1	ENST00000610897.4	protein_coding	1890820,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1787322,1785285	1891117,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437,1787053	Gene ID= ENSG00000078369.17 TPM= 4.66 Transcript Type= protein_coding
chr1	1785293	1891125	1785293	1891125	-	transcript521.chr1.nic@GNB1	transcript521.chr1.nic	protein_coding	1890820,1839190,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1785293	1891125,1839238,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437	Gene ID= ENSG00000078369.17 TPM= 6.27 Transcript Type= NA
chr1	1785286	1891056	1785286	1891056	-	ENST00000378609.8@GNB1	ENST00000378609.8	protein_coding	1890820,1839190,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1787322,1785286	1891056,1839238,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437,1787053	Gene ID= ENSG00000078369.17 TPM= 63.55 Transcript Type= protein_coding
chr1	1891498	1892727	1891498	1892727	+	transcript531.chr1.nnic@NA	transcript531.chr1.nnic	NA	1891498	1892727	Gene ID= novel_gene_chr1_532 TPM= 1.93 Transcript Type= NA
chr1	1914827	1917294	1914827	1917294	+	ENST00000307786.7@CALML6	ENST00000307786.7	protein_coding	1914827,1915685,1916441,1916752,1916974,1917147	1915307,1915735,1916615,1916896,1917074,1917294	Gene ID= ENSG00000169885.9 TPM= 3.21 Transcript Type= protein_coding
chr1	1915619	1917294	1915619	1917294	+	transcript535.chr1.nic@CALML6	transcript535.chr1.nic	protein_coding	1915619,1916441,1916752,1916974,1917147	1915735,1916615,1916896,1917074,1917294	Gene ID= ENSG00000169885.9 TPM= 7.08 Transcript Type= NA
chr1	1915108	1917294	1915108	1917294	+	ENST00000378604.3@CALML6	ENST00000378604.3	protein_coding	1915108,1916441,1916752,1916974,1917147	1915307,1916615,1916896,1917074,1917294	Gene ID= ENSG00000169885.9 TPM= 4.18 Transcript Type= protein_coding
chr1	1917591	1919280	1917591	1919280	-	transcript536.chr1.nnic@TMEM52	transcript536.chr1.nnic	protein_coding	1919210,1919182,1919045,1918893,1918253,1917591	1919280,1919191,1919088,1918934,1918431,1918162	Gene ID= ENSG00000178821.12 TPM= 12.8 Transcript Type= NA
chr1	1917591	1919273	1917591	1919273	-	ENST00000310991.7@TMEM52	ENST00000310991.7	protein_coding	1919182,1919045,1918893,1918253,1917591	1919273,1919088,1918934,1918431,1918162	Gene ID= ENSG00000178821.12 TPM= 9.9 Transcript Type= protein_coding
chr1	1917591	1919280	1917591	1919280	-	transcript540.chr1.nnic@TMEM52	transcript540.chr1.nnic	protein_coding	1919210,1919182,1918893,1918253,1917591	1919280,1919191,1919088,1918431,1918162	Gene ID= ENSG00000178821.12 TPM= 12.47 Transcript Type= NA
chr1	1917591	1919280	1917591	1919280	-	transcript542.chr1.nnic@TMEM52	transcript542.chr1.nnic	protein_coding	1919210,1919182,1919045,1918253,1917591	1919280,1919191,1919088,1918934,1918162	Gene ID= ENSG00000178821.12 TPM= 4.79 Transcript Type= NA
chr1	1917591	1919284	1917591	1919284	-	transcript543.chr1.nic@TMEM52	transcript543.chr1.nic	protein_coding	1919045,1918893,1918253,1917591	1919284,1918934,1918431,1918162	Gene ID= ENSG00000178821.12 TPM= 12.8 Transcript Type= NA
chr1	1917591	1919270	1917591	1919270	-	transcript547.chr1.nnic@TMEM52	transcript547.chr1.nnic	protein_coding	1919045,1918253,1917591	1919270,1918431,1918162	Gene ID= ENSG00000178821.12 TPM= 5.72 Transcript Type= NA
chr1	1917591	1919284	1917591	1919284	-	transcript548.chr1.nic@TMEM52	transcript548.chr1.nic	protein_coding	1919045,1918253,1917591	1919284,1918934,1918162	Gene ID= ENSG00000178821.12 TPM= 4.79 Transcript Type= NA
chr1	1917591	1919280	1917591	1919280	-	transcript549.chr1.nic@TMEM52	transcript549.chr1.nic	protein_coding	1919182,1918253,1917591	1919280,1919088,1918162	Gene ID= ENSG00000178821.12 TPM= 9.13 Transcript Type= NA
chr1	2189548	2194774	2189548	2194774	-	ENST00000378546.8@FAAP20	ENST00000378546.8	protein_coding	2194688,2193998,2193639,2189548	2194774,2194133,2193910,2189781	Gene ID= ENSG00000162585.16 TPM= 5.79 Transcript Type= protein_coding
chr1	2189548	2194750	2189548	2194750	-	ENST00000378543.2@FAAP20	ENST00000378543.2	protein_coding	2194688,2193639,2189548	2194750,2193910,2189781	Gene ID= ENSG00000162585.16 TPM= 1.45 Transcript Type= protein_coding
chr1	2191901	2194748	2191901	2194748	-	ENST00000420515.1@FAAP20	ENST00000420515.1	protein_coding	2194688,2193998,2193639,2191901	2194748,2194133,2193910,2192975	Gene ID= ENSG00000162585.16 TPM= 3.38 Transcript Type= protein_coding
chr1	2391794	2403751	2391794	2403751	+	transcript572.chr1.nnic@RER1	transcript572.chr1.nnic	protein_coding	2391794,2393270,2395784,2397116,2399415,2400857,2402207,2403035	2391958,2393355,2395871,2397220,2399514,2400935,2402342,2403751	Gene ID= ENSG00000157916.19 TPM= 3.86 Transcript Type= NA
chr1	2391833	2405444	2391833	2405444	+	ENST00000605895.5@RER1	ENST00000605895.5	protein_coding	2391833,2395784,2397116,2399415,2400857,2402207,2403035	2391958,2395871,2397220,2399514,2400935,2402342,2405444	Gene ID= ENSG00000157916.19 TPM= 41.51 Transcript Type= protein_coding
chr1	2391890	2403751	2391890	2403751	+	ENST00000378512.5@RER1	ENST00000378512.5	protein_coding	2391890,2395784,2397116,2399415,2400857,2402097,2403035	2391958,2395871,2397220,2399514,2400935,2402342,2403751	Gene ID= ENSG00000157916.19 TPM= 16.41 Transcript Type= protein_coding
chr1	2403964	2412530	2403964	2412530	-	ENST00000288774.7@PEX10	ENST00000288774.7	protein_coding	2412391,2410371,2408452,2406720,2406484,2403964	2412530,2410451,2408858,2406955,2406619,2405834	Gene ID= ENSG00000157911.9 TPM= 3.86 Transcript Type= protein_coding
chr1	2404819	2412571	2404819	2412571	-	ENST00000447513.6@PEX10	ENST00000447513.6	protein_coding	2412391,2410371,2408452,2406720,2406484,2404819	2412571,2410451,2408858,2406895,2406619,2405834	Gene ID= ENSG00000157911.9 TPM= 30.89 Transcript Type= protein_coding
chr1	2508537	2526612	2508537	2526612	-	transcript600.chr1.nic@PANK4	transcript600.chr1.nic	protein_coding	2526464,2521718,2521101,2520723,2520322,2519801,2519143,2518516,2518164,2515562,2514354,2514002,2512888,2511628,2511338,2510678,2510057,2509862,2508537	2526612,2521800,2521315,2520906,2520414,2519954,2519324,2518597,2518264,2515717,2514466,2514089,2513039,2511683,2511387,2510748,2510157,2509930,2509060	Gene ID= ENSG00000157881.13 TPM= 8.21 Transcript Type= NA
chr1	2508533	2526628	2508533	2526628	-	ENST00000378466.7@PANK4	ENST00000378466.7	protein_coding	2526464,2521718,2521101,2520723,2520322,2519801,2519143,2518516,2518164,2515562,2514354,2514002,2512888,2511628,2511338,2510678,2510057,2509862,2508533	2526628,2521800,2521315,2520906,2520414,2519954,2519324,2518597,2518264,2515717,2514466,2514089,2513039,2511683,2511387,2510782,2510157,2509930,2509060	Gene ID= ENSG00000157881.13 TPM= 50.68 Transcript Type= protein_coding
chr1	2556379	2563749	2556379	2563749	+	transcript607.chr1.nic@TNFRSF14	transcript607.chr1.nic	protein_coding	2556379,2557726,2558343,2558881,2560624,2561494,2562865,2563148	2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563749	Gene ID= ENSG00000157873.17 TPM= 1.93 Transcript Type= NA
chr1	2561231	2563829	2561231	2563829	+	transcript614.chr1.nic@TNFRSF14	transcript614.chr1.nic	protein_coding	2561231,2562865,2563148	2561815,2562896,2563829	Gene ID= ENSG00000157873.17 TPM= 1.93 Transcript Type= NA
chr1	3454426	3481113	3454426	3481113	+	ENST00000378378.8@ARHGEF16	ENST00000378378.8	protein_coding	3454426,3463066,3466148,3467168,3468880,3469433,3473078,3473393,3474708,3475970,3477875,3478424,3479517,3479812,3480448	3454811,3463672,3466193,3467337,3468936,3469593,3473230,3473522,3474782,3476062,3478026,3478612,3479590,3479913,3481113	Gene ID= ENSG00000130762.14 TPM= 1.93 Transcript Type= protein_coding
chr1	3487967	3490479	3487967	3490479	-	transcript623.chr1.nnic@NA	transcript623.chr1.nnic	NA	3487967	3490479	Gene ID= novel_gene_chr1_624 TPM= 1.93 Transcript Type= NA
chr1	3489920	3512092	3489920	3512092	-	transcript620.chr1.nnic@MEGF6	transcript620.chr1.nnic	protein_coding	3512006,3510783,3509870,3509075,3507795,3506108,3505422,3505208,3501796,3501177,3500966,3500633,3499796,3499588,3498371,3497233,3496655,3495890,3494613,3494371,3493996,3493771,3492639,3490912,3489920	3512092,3510902,3509992,3509245,3507923,3506236,3505556,3505342,3501921,3501308,3501094,3500764,3499924,3499716,3498499,3497441,3496783,3496018,3494741,3494499,3494124,3493899,3492767,3490959,3490589	Gene ID= ENSG00000162591.15 TPM= 1.93 Transcript Type= NA
chr1	3624991	3630127	3624991	3630127	+	transcript627.chr1.nnic@TPRG1L	transcript627.chr1.nnic	protein_coding	3624991,3625424,3625713,3627500,3628409	3625144,3625515,3625889,3627653,3630127	Gene ID= ENSG00000158109.14 TPM= 11.58 Transcript Type= NA
chr1	3625002	3630127	3625002	3630127	+	ENST00000378344.6@TPRG1L	ENST00000378344.6	protein_coding	3625002,3625424,3625713,3627500,3628409	3625273,3625515,3625889,3627653,3630127	Gene ID= ENSG00000158109.14 TPM= 83.02 Transcript Type= protein_coding
chr1	3630767	3650104	3630767	3650104	-	transcript631.chr1.nic@WRAP73	transcript631.chr1.nic	protein_coding	3649931,3647408,3646666,3638750,3636995,3635944,3634997,3633398,3632213,3630767	3650104,3647560,3646782,3638822,3637098,3636030,3635074,3633503,3632338,3631657	Gene ID= ENSG00000116213.15 TPM= 2.9 Transcript Type= NA
chr1	3630767	3650058	3630767	3650058	-	ENST00000378322.7@WRAP73	ENST00000378322.7	protein_coding	3649931,3647408,3646666,3638750,3636995,3635944,3635160,3634997,3633398,3632213,3630767	3650058,3647560,3646782,3638822,3637098,3636030,3635294,3635074,3633503,3632338,3631657	Gene ID= ENSG00000116213.15 TPM= 6.76 Transcript Type= protein_coding
chr1	3630767	3650073	3630767	3650073	-	ENST00000270708.11@WRAP73	ENST00000270708.11	protein_coding	3649931,3647408,3646666,3638750,3636995,3635944,3635160,3634997,3633398,3632213,3631466,3630767	3650073,3647560,3646782,3638822,3637098,3636030,3635294,3635074,3633503,3632338,3631657,3631117	Gene ID= ENSG00000116213.15 TPM= 21.24 Transcript Type= protein_coding
chr1	3737149	3747387	3737149	3747387	-	transcript638.chr1.nic@TP73-AS1	transcript638.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747387,3743190,3742911,3740387,3737854	Gene ID= ENSG00000227372.11 TPM= 2.9 Transcript Type= NA
chr1	3737149	3747387	3737149	3747387	-	transcript640.chr1.nic@TP73-AS1	transcript640.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747387,3743190,3742911,3740387,3738513	Gene ID= ENSG00000227372.11 TPM= 6.76 Transcript Type= NA
chr1	3737149	3747335	3737149	3747335	-	transcript642.chr1.nic@TP73-AS1	transcript642.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747335,3743190,3742960,3740387,3738513	Gene ID= ENSG00000227372.11 TPM= 2.9 Transcript Type= NA
chr1	3737149	3747336	3737149	3747336	-	ENST00000423764.5@TP73-AS1	ENST00000423764.5	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747336,3743190,3742957,3740387,3737854	Gene ID= ENSG00000227372.11 TPM= 1.93 Transcript Type= processed_transcript
chr1	3778558	3796504	3778558	3796504	-	ENST00000378251.2@LRRC47	ENST00000378251.2	protein_coding	3795862,3786849,3785087,3783996,3782661,3781512,3778558	3796504,3787310,3785203,3784111,3782763,3781601,3781336	Gene ID= ENSG00000130764.9 TPM= 15.44 Transcript Type= protein_coding
chr1	3829333	3857208	3829333	3857208	-	transcript667.chr1.nnic@CEP104	transcript667.chr1.nnic	protein_coding	3856889,3852295,3851686,3848608,3847475,3845289,3844907,3839608,3838964,3837292,3836495,3834925,3833862,3831046,3829791,3829333	3857208,3852421,3851802,3848781,3847613,3845351,3844983,3839776,3839119,3837519,3836692,3835092,3834035,3831222,3829997,3829373	Gene ID= ENSG00000116198.12 TPM= 1.93 Transcript Type= NA
chr1	3829333	3857241	3829333	3857241	-	transcript669.chr1.nic@CEP104	transcript669.chr1.nic	protein_coding	3856889,3852295,3848608,3847475,3845289,3844907,3839608,3838964,3837292,3836495,3834925,3833862,3831046,3829791,3829333	3857241,3852421,3848781,3847613,3845351,3844983,3839776,3839119,3837519,3836692,3835092,3834035,3831222,3829997,3829373	Gene ID= ENSG00000116198.12 TPM= 15.93 Transcript Type= NA
chr1	3812081	3857199	3812081	3857199	-	ENST00000378230.7@CEP104	ENST00000378230.7	protein_coding	3856889,3852295,3848608,3847475,3845289,3844907,3839608,3838964,3837292,3836495,3834925,3833862,3831046,3829791,3829266,3826708,3826370,3825758,3823424,3823174,3816280,3812081	3857199,3852421,3848781,3847613,3845351,3844983,3839776,3839119,3837519,3836692,3835092,3834035,3831222,3829997,3829373,3826744,3826436,3825866,3823562,3823241,3816370,3815517	Gene ID= ENSG00000116198.12 TPM= 2.41 Transcript Type= protein_coding
chr1	3889125	3900285	3889125	3900285	-	ENST00000361605.3@C1orf174	ENST00000361605.3	protein_coding	3900172,3892883,3890569,3889125	3900285,3892996,3891057,3890073	Gene ID= ENSG00000198912.10 TPM= 41.51 Transcript Type= protein_coding
chr1	6026013	6101192	6026013	6101192	+	ENST00000341524.5@KCNAB2	ENST00000341524.5	protein_coding	6026013,6040517,6041831,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485	6026445,6040645,6041872,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101192	Gene ID= ENSG00000069424.14 TPM= 1.93 Transcript Type= protein_coding
chr1	6026013	6101192	6026013	6101192	+	ENST00000352527.5@KCNAB2	ENST00000352527.5	protein_coding	6026013,6040517,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485	6026445,6040645,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101192	Gene ID= ENSG00000069424.14 TPM= 1.93 Transcript Type= protein_coding
chr1	6185020	6199612	6185020	6199612	-	ENST00000234875.8@RPL22	ENST00000234875.8	protein_coding	6199562,6197652,6192930,6185020	6199612,6197756,6193054,6186816	Gene ID= ENSG00000116251.9 TPM= 63.71 Transcript Type= protein_coding
chr1	6221196	6235982	6221196	6235982	-	transcript692.chr1.nnic@ICMT	transcript692.chr1.nnic	protein_coding	6235717,6234886,6233474,6231902,6223417,6221196	6235982,6234974,6233643,6232119,6225262,6222153	Gene ID= ENSG00000116237.15 TPM= 1.93 Transcript Type= NA
chr1	6231690	6235983	6231690	6235983	-	transcript696.chr1.nic@ICMT	transcript696.chr1.nic	protein_coding	6235717,6234886,6233474,6231690	6235983,6234974,6233643,6232119	Gene ID= ENSG00000116237.15 TPM= 1.93 Transcript Type= NA
chr1	6221193	6235940	6221193	6235940	-	ENST00000343813.9@ICMT	ENST00000343813.9	protein_coding	6235717,6234886,6233474,6231902,6221193	6235940,6234974,6233643,6232119,6225262	Gene ID= ENSG00000116237.15 TPM= 17.38 Transcript Type= protein_coding
chr1	6223491	6235972	6223491	6235972	-	ENST00000489498.5@ICMT	ENST00000489498.5	protein_coding	6235717,6234886,6234405,6233474,6231902,6223491	6235972,6234974,6234511,6233643,6232119,6225262	Gene ID= ENSG00000116237.15 TPM= 13.51 Transcript Type= nonsense_mediated_decay
chr1	6264273	6385813	6264273	6385813	-	ENST00000377855.6@ACOT7	ENST00000377855.6	protein_coding	6385494,6349749,6339433,6333477,6327299,6318492,6294864,6281102,6264273	6385813,6349866,6339589,6333568,6327413,6318578,6294980,6281286,6264695	Gene ID= ENSG00000097021.19 TPM= 3.86 Transcript Type= protein_coding
chr1	6521347	6554535	6521347	6554535	-	ENST00000377705.5@NOL9	ENST00000377705.5	protein_coding	6554107,6550396,6549571,6545045,6544826,6541830,6533280,6532463,6531968,6528994,6526696,6521347	6554535,6550615,6549698,6545180,6544922,6541927,6533441,6532760,6532079,6529171,6526829,6526003	Gene ID= ENSG00000162408.10 TPM= 4.83 Transcript Type= protein_coding
chr1	6579967	6589280	6579967	6589280	+	transcript710.chr1.nic@ZBTB48	transcript710.chr1.nic	protein_coding	6579967,6580541,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916	6580070,6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280	Gene ID= ENSG00000204859.12 TPM= 8.69 Transcript Type= NA
chr1	6580048	6589280	6580048	6589280	+	ENST00000377674.8@ZBTB48	ENST00000377674.8	protein_coding	6580048,6580541,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916	6580136,6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280	Gene ID= ENSG00000204859.12 TPM= 5.79 Transcript Type= protein_coding
chr1	6590724	6603001	6590724	6603001	-	ENST00000377663.3@KLHL21	ENST00000377663.3	protein_coding	6601797,6599047,6590724	6603001,6599452,6595557	Gene ID= ENSG00000162413.16 TPM= 13.32 Transcript Type= protein_coding
chr1	6590724	6602869	6590724	6602869	-	ENST00000377658.8@KLHL21	ENST00000377658.8	protein_coding	6601797,6599047,6595485,6590724	6602869,6599452,6595557,6593658	Gene ID= ENSG00000162413.16 TPM= 931.14 Transcript Type= protein_coding
chr1	6599290	6600379	6599290	6600379	+	transcript734.chr1.nnic@NA	transcript734.chr1.nnic	NA	6599290,6599848,6600233	6599492,6600008,6600379	Gene ID= novel_gene_chr1_735 TPM= 2.9 Transcript Type= NA
chr1	6613685	6624033	6613685	6624033	+	ENST00000377648.4@PHF13	ENST00000377648.4	protein_coding	6613685,6616757,6619803,6621411	6614105,6616858,6620337,6624033	Gene ID= ENSG00000116273.5 TPM= 19.31 Transcript Type= protein_coding
chr1	6624866	6633565	6624866	6633565	+	ENST00000054650.8@THAP3	ENST00000054650.8	protein_coding	6624866,6625150,6628499,6630288,6632391,6632796	6624954,6625292,6628691,6630353,6632495,6633565	Gene ID= ENSG00000041988.15 TPM= 27.99 Transcript Type= protein_coding
chr1	6634168	6701924	6634168	6701924	-	ENST00000377577.9@DNAJC11	ENST00000377577.9	protein_coding	6701729,6680908,6678394,6667709,6653911,6652829,6651529,6645789,6645041,6644558,6639902,6638295,6637447,6637198,6636117,6634168	6701924,6681037,6678467,6667810,6654039,6652951,6651602,6645978,6645126,6644674,6640057,6638364,6637504,6637340,6636246,6635700	Gene ID= ENSG00000007923.15 TPM= 135.14 Transcript Type= protein_coding
chr1	6783892	6784985	6783892	6784985	-	transcript762.chr1.nnic@NA	transcript762.chr1.nnic	NA	6783892	6784985	Gene ID= novel_gene_chr1_763 TPM= 16.41 Transcript Type= NA
chr1	6785454	6872053	6785454	6872053	+	ENST00000490738.5@CAMTA1	ENST00000490738.5	protein_coding	6785454,6825092,6871757	6785575,6825210,6872053	Gene ID= ENSG00000171735.18 TPM= 18.34 Transcript Type= processed_transcript
chr1	6785480	6872038	6785480	6872038	+	ENST00000473578.5@CAMTA1	ENST00000473578.5	protein_coding	6785480,6820181,6825092,6871757	6785575,6820250,6825210,6872038	Gene ID= ENSG00000171735.18 TPM= 128.39 Transcript Type= protein_coding
chr1	6785464	6888201	6785464	6888201	+	ENST00000476163.5@CAMTA1	ENST00000476163.5	protein_coding	6785464,6825092,6871757,6887654	6785575,6825210,6871840,6888201	Gene ID= ENSG00000171735.18 TPM= 2.9 Transcript Type= processed_transcript
chr1	7771269	7781432	7771269	7781432	+	ENST00000054666.10@VAMP3	ENST00000054666.10	protein_coding	7771269,7773442,7777160,7778118,7779626	7771385,7773511,7777318,7778169,7781432	Gene ID= ENSG00000049245.12 TPM= 147.69 Transcript Type= protein_coding
chr1	7961663	7985279	7961663	7985279	+	ENST00000338639.9@PARK7	ENST00000338639.9	protein_coding	7961663,7962763,7965324,7969345,7970894,7977652,7984894	7961793,7962875,7965425,7969404,7970963,7977738,7985279	Gene ID= ENSG00000116288.12 TPM= 328.21 Transcript Type= protein_coding
chr1	8011719	8026309	8011719	8026309	-	transcript801.chr1.nnic@ERRFI1	transcript801.chr1.nnic	protein_coding	8026158,8022393,8015495,8015308,8011719	8026309,8022467,8015692,8015384,8014396	Gene ID= ENSG00000116285.12 TPM= 9.97 Transcript Type= NA
chr1	8011727	8026312	8011727	8026312	-	transcript803.chr1.nnic@ERRFI1	transcript803.chr1.nnic	protein_coding	8026158,8015495,8015308,8013359,8011727	8026312,8015692,8015384,8014396,8012957	Gene ID= ENSG00000116285.12 TPM= 3.7 Transcript Type= NA
chr1	8011719	8026308	8011719	8026308	-	ENST00000377482.9@ERRFI1	ENST00000377482.9	protein_coding	8026158,8015495,8015308,8011719	8026308,8015692,8015384,8014396	Gene ID= ENSG00000116285.12 TPM= 27.83 Transcript Type= protein_coding
chr1	8026446	8026692	8026446	8026692	+	transcript810.chr1.nnic@NA	transcript810.chr1.nnic	NA	8026446	8026692	Gene ID= novel_gene_chr1_811 TPM= 1.93 Transcript Type= NA
chr1	8317826	8344165	8317826	8344165	+	ENST00000471889.5@SLC45A1	ENST00000471889.5	protein_coding	8317826,8324306,8325298,8325818,8330209,8335437,8337816,8339493,8343747	8318186,8324726,8325390,8326042,8330936,8335590,8337992,8339698,8344165	Gene ID= ENSG00000162426.14 TPM= 3.86 Transcript Type= protein_coding
chr1	8352406	8360765	8352406	8360765	-	transcript817.chr1.nic@RERE	transcript817.chr1.nic	protein_coding	8360112,8359764,8358196,8356100,8355419,8352406	8360765,8359986,8358916,8356246,8355599,8355120	Gene ID= ENSG00000142599.17 TPM= 182.28 Transcript Type= NA
chr1	8861002	8878760	8861002	8878760	-	transcript825.chr1.nnic@ENO1	transcript825.chr1.nnic	protein_coding	8878580,8874824,8871891,8870825,8870452,8867988,8867117,8866279,8865285,8863891,8863235,8862887,8861002	8878760,8874917,8871986,8870883,8870510,8868057,8867250,8866501,8865482,8864092,8863343,8862945,8861429	Gene ID= ENSG00000074800.13 TPM= 43.12 Transcript Type= NA
chr1	8861002	8878760	8861002	8878760	-	transcript830.chr1.nnic@ENO1	transcript830.chr1.nnic	protein_coding	8878580,8874824,8871891,8870825,8867988,8867117,8866279,8865285,8863891,8863235,8862887,8861002	8878760,8874917,8871986,8870883,8868057,8867250,8866501,8865482,8864092,8863343,8862945,8861429	Gene ID= ENSG00000074800.13 TPM= 213.02 Transcript Type= NA
chr1	8861002	8878760	8861002	8878760	-	transcript832.chr1.nic@ENO1	transcript832.chr1.nic	protein_coding	8878580,8874824,8870452,8867988,8867117,8866279,8865285,8863891,8863235,8862887,8861002	8878760,8874917,8871986,8868057,8867250,8866501,8865482,8864092,8863343,8862945,8861429	Gene ID= ENSG00000074800.13 TPM= 27.99 Transcript Type= NA
chr1	8861002	8878690	8861002	8878690	-	ENST00000234590.8@ENO1	ENST00000234590.8	protein_coding	8878580,8874824,8871891,8870452,8867988,8867117,8866279,8865285,8863891,8863235,8862887,8861002	8878690,8874917,8871986,8870510,8868057,8867250,8866501,8865482,8864092,8863343,8862945,8861429	Gene ID= ENSG00000074800.13 TPM= 205.29 Transcript Type= protein_coding
chr1	8878829	8879781	8878829	8879781	+	transcript834.chr1.nnic@NA	transcript834.chr1.nnic	NA	8878829	8879781	Gene ID= novel_gene_chr1_835 TPM= 1.93 Transcript Type= NA
chr1	9036946	9069824	9036946	9069824	-	transcript837.chr1.nic@SLC2A5	transcript837.chr1.nic	protein_coding	9069698,9069504,9058152,9057448,9047610,9041785,9040064,9039800,9039552,9038828,9038431,9037897,9036946	9069824,9069594,9058250,9057608,9047734,9041937,9040189,9039987,9039662,9038929,9038506,9038024,9037789	Gene ID= ENSG00000142583.17 TPM= 15.13 Transcript Type= NA
chr1	9035107	9069716	9035107	9069716	-	ENST00000377424.8@SLC2A5	ENST00000377424.8	protein_coding	9069504,9058152,9057448,9047610,9041785,9040064,9039800,9039552,9038828,9038431,9037897,9035107	9069716,9058250,9057608,9047734,9041937,9040189,9039987,9039662,9038929,9038506,9038024,9037789	Gene ID= ENSG00000142583.17 TPM= 20.27 Transcript Type= protein_coding
chr1	9100307	9129195	9100307	9129195	-	transcript854.chr1.nnic@GPR157	transcript854.chr1.nnic	protein_coding	9128645,9111276,9105486,9102396,9100307	9129195,9111489,9105680,9104634,9101098	Gene ID= ENSG00000180758.11 TPM= 4.83 Transcript Type= NA
chr1	9101214	9129195	9101214	9129195	-	transcript861.chr1.nnic@GPR157	transcript861.chr1.nnic	protein_coding	9128645,9111276,9105486,9103431,9101214	9129195,9111489,9105680,9104634,9102198	Gene ID= ENSG00000180758.11 TPM= 2.9 Transcript Type= NA
chr1	9101214	9129127	9101214	9129127	-	transcript862.chr1.nnic@GPR157	transcript862.chr1.nnic	protein_coding	9128645,9111276,9105486,9103794,9101214	9129127,9111489,9105680,9104634,9102198	Gene ID= ENSG00000180758.11 TPM= 3.86 Transcript Type= NA
chr1	9100305	9129170	9100305	9129170	-	ENST00000377411.4@GPR157	ENST00000377411.4	protein_coding	9128645,9111276,9105486,9100305	9129170,9111489,9105680,9104634	Gene ID= ENSG00000180758.11 TPM= 7.72 Transcript Type= protein_coding
chr1	9127312	9129195	9127312	9129195	-	transcript875.chr1.nnic@NA	transcript875.chr1.nnic	NA	9127312	9129195	Gene ID= novel_gene_chr1_876 TPM= 1.93 Transcript Type= NA
chr1	9239844	9267898	9239844	9267898	+	ENST00000602477.1@H6PD	ENST00000602477.1	protein_coding	9239844,9244925,9246966,9262059,9263509	9240018,9245561,9247083,9262328,9267898	Gene ID= ENSG00000049239.12 TPM= 39.1 Transcript Type= protein_coding
chr1	9234775	9271337	9234775	9271337	+	ENST00000377403.6@H6PD	ENST00000377403.6	protein_coding	9234775,9244925,9246966,9262059,9263509	9235066,9245561,9247083,9262328,9271337	Gene ID= ENSG00000049239.12 TPM= 70.95 Transcript Type= protein_coding
chr1	9292880	9369532	9292880	9369532	+	ENST00000328089.10@SPSB1	ENST00000328089.10	protein_coding	9292880,9355743,9367448	9293071,9356585,9369532	Gene ID= ENSG00000171621.13 TPM= 73.36 Transcript Type= protein_coding
chr1	9295950	9298296	9295950	9298296	+	transcript893.chr1.nnic@NA	transcript893.chr1.nnic	NA	9295950	9298296	Gene ID= novel_gene_chr1_894 TPM= 1.93 Transcript Type= NA
chr1	9499013	9503384	9499013	9503384	-	transcript898.chr1.nnic@AL928921.1	transcript898.chr1.nnic	lincRNA	9503221,9499982,9499013	9503384,9501548,9499502	Gene ID= ENSG00000235263.1 TPM= 8.69 Transcript Type= NA
chr1	9500754	9503380	9500754	9503380	-	transcript901.chr1.nnic@AL928921.1	transcript901.chr1.nnic	lincRNA	9503221,9502136,9500754	9503380,9502257,9501548	Gene ID= ENSG00000235263.1 TPM= 8.69 Transcript Type= NA
chr1	9539468	9582771	9539468	9582771	+	transcript909.chr1.nnic@SLC25A33	transcript909.chr1.nnic	protein_coding	9539468,9553626,9567284,9573346,9579954,9582299	9539747,9553805,9567361,9573412,9580234,9582771	Gene ID= ENSG00000171612.6 TPM= 4.83 Transcript Type= NA
chr1	9539489	9582771	9539489	9582771	+	transcript910.chr1.nnic@SLC25A33	transcript910.chr1.nnic	protein_coding	9539489,9553626,9570258,9573346,9579954,9582299	9539747,9553805,9570358,9573412,9580234,9582771	Gene ID= ENSG00000171612.6 TPM= 2.9 Transcript Type= NA
chr1	9575393	9577479	9575393	9577479	+	transcript914.chr1.nnic@NA	transcript914.chr1.nnic	NA	9575393	9577479	Gene ID= novel_gene_chr1_915 TPM= 1.93 Transcript Type= NA
chr1	9588922	9604954	9588922	9604954	+	ENST00000340305.9@TMEM201	ENST00000340305.9	protein_coding	9588922,9595890,9596859,9598449,9601105,9602069	9589043,9596010,9597053,9598625,9601454,9604954	Gene ID= ENSG00000188807.12 TPM= 57.92 Transcript Type= protein_coding
chr1	9588922	9614849	9588922	9614849	+	ENST00000340381.10@TMEM201	ENST00000340381.10	protein_coding	9588922,9595890,9596859,9598449,9601105,9602069,9607557,9609840,9610506,9611753,9612986	9589043,9596010,9597053,9598625,9601454,9602272,9607789,9609911,9610805,9611890,9614849	Gene ID= ENSG00000188807.12 TPM= 2.9 Transcript Type= protein_coding
chr1	9729026	9824526	9729026	9824526	-	ENST00000377298.8@CLSTN1	ENST00000377298.8	protein_coding	9823643,9773272,9756481,9755114,9751473,9749764,9749461,9744395,9743884,9741094,9737498,9735885,9735467,9734948,9733972,9733401,9731761,9731206,9729026	9824526,9773394,9756510,9755309,9751681,9749913,9749646,9744643,9744005,9741256,9737554,9736042,9735615,9735174,9734142,9733546,9731896,9731390,9730705	Gene ID= ENSG00000171603.16 TPM= 20.27 Transcript Type= protein_coding
chr1	9729028	9823984	9729028	9823984	-	ENST00000361311.4@CLSTN1	ENST00000361311.4	protein_coding	9823643,9773272,9755114,9751473,9749764,9749461,9744395,9743884,9741094,9737498,9735885,9735467,9734948,9733972,9733401,9731761,9731206,9729028	9823984,9773394,9755309,9751681,9749913,9749646,9744643,9744005,9741256,9737554,9736042,9735615,9735174,9734142,9733546,9731896,9731390,9730705	Gene ID= ENSG00000171603.16 TPM= 7.72 Transcript Type= protein_coding
chr1	9848276	9910263	9848276	9910263	-	ENST00000377263.5@CTNNBIP1	ENST00000377263.5	protein_coding	9910095,9883705,9877905,9871969,9871187,9848276	9910263,9883738,9877989,9872088,9871277,9850776	Gene ID= ENSG00000178585.14 TPM= 2.9 Transcript Type= protein_coding
chr1	9850109	9910336	9850109	9910336	-	ENST00000400904.7@CTNNBIP1	ENST00000400904.7	protein_coding	9910095,9877905,9871969,9871187,9850109	9910336,9877989,9872088,9871277,9850776	Gene ID= ENSG00000178585.14 TPM= 9.65 Transcript Type= protein_coding
chr1	9930253	9943407	9930253	9943407	-	ENST00000377213.1@LZIC	ENST00000377213.1	protein_coding	9943349,9942624,9936519,9935492,9934762,9932803,9931891,9930253	9943407,9942782,9936627,9935627,9934860,9932898,9931972,9930457	Gene ID= ENSG00000162441.11 TPM= 1.93 Transcript Type= protein_coding
chr1	9943475	9983119	9943475	9983119	+	transcript940.chr1.nnic@NMNAT1	transcript940.chr1.nnic	protein_coding	9943475,9947213,9972018,9975592,9981031,9982301	9943515,9947625,9972188,9975775,9981170,9983119	Gene ID= ENSG00000173614.13 TPM= 1.93 Transcript Type= NA
chr1	10107722	10110534	10107722	10110534	+	transcript953.chr1.nnic@NA	transcript953.chr1.nnic	NA	10107722	10110534	Gene ID= novel_gene_chr1_954 TPM= 4.83 Transcript Type= NA
chr1	10210573	10381603	10210573	10381603	+	transcript956.chr1.nnic@KIF1B	transcript956.chr1.nnic	protein_coding	10210573,10232250,10256247,10258493,10261905,10267380,10268152,10271502,10272241,10273014,10275428,10276321,10277986,10279097,10282322,10291082,10292047,10295086,10295660,10296582,10296897,10297174,10320043,10321709,10323884,10324758,10334520,10336657,10337074,10337371,10339769,10342050,10343232,10345845,10347761,10348649,10352631,10360929,10361692,10363283,10365100,10365409,10368467,10371141,10374316,10374854,10375255,10376545	10210878,10232434,10256323,10258672,10261970,10267558,10268263,10271579,10272306,10273031,10275503,10276399,10278128,10279138,10282533,10291161,10292122,10295165,10295766,10296665,10297077,10297246,10320136,10321857,10324062,10324895,10334638,10336742,10337203,10337533,10339859,10342168,10343287,10345953,10347827,10348733,10352736,10361043,10361825,10363344,10365245,10365648,10368538,10371262,10374465,10375046,10375373,10381603	Gene ID= ENSG00000054523.17 TPM= 28.1 Transcript Type= NA
chr1	10210512	10306757	10210512	10306757	+	transcript972.chr1.nic@KIF1B	transcript972.chr1.nic	protein_coding	10210512,10232250,10256247,10258493,10261905,10267380,10268152,10271502,10272241,10275428,10276321,10277986,10279097,10282400,10291082,10292047,10295086,10295660,10296582,10296897,10297174,10303163	10210878,10232434,10256323,10258672,10261970,10267558,10268263,10271579,10272306,10275503,10276399,10278128,10279138,10282533,10291161,10292122,10295165,10295766,10296665,10297077,10297246,10306757	Gene ID= ENSG00000054523.17 TPM= 17.82 Transcript Type= NA
chr1	10210512	10263306	10210512	10263306	+	transcript1009.chr1.nnic@KIF1B	transcript1009.chr1.nnic	protein_coding	10210512,10232250,10256247,10258493,10261905,10263008	10210878,10232434,10256323,10258672,10261970,10263306	Gene ID= ENSG00000054523.17 TPM= 16.52 Transcript Type= NA
chr1	10210805	10308597	10210805	10308597	+	ENST00000377093.8@KIF1B	ENST00000377093.8	protein_coding	10210805,10232250,10256247,10258493,10261905,10267380,10268152,10271502,10272241,10275428,10276321,10277986,10282400,10291082,10292047,10295086,10295660,10296582,10296897,10297174,10303163	10210878,10232434,10256323,10258672,10261970,10267558,10268263,10271579,10272306,10275503,10276399,10278128,10282533,10291161,10292122,10295165,10295766,10296665,10297077,10297246,10308597	Gene ID= ENSG00000054523.17 TPM= 58.08 Transcript Type= protein_coding
chr1	10298966	10299072	10298966	10299072	+	ENST00000362692.1@RNU6-37P	ENST00000362692.1	snRNA	10298966	10299072	Gene ID= ENSG00000199562.1 TPM= 5.79 Transcript Type= snRNA
chr1	10399080	10420144	10399080	10420144	+	ENST00000270776.12@PGD	ENST00000270776.12	protein_coding	10399080,10399629,10400393,10403071,10404161,10408071,10411418,10413062,10416987,10417376,10418826,10419417,10419630	10399125,10399704,10400572,10403136,10404279,10408140,10411552,10413251,10417117,10417509,10418925,10419539,10420144	Gene ID= ENSG00000142657.20 TPM= 41.51 Transcript Type= protein_coding
chr1	10430443	10442809	10430443	10442809	+	ENST00000309048.7@CENPS	ENST00000309048.7	protein_coding	10430443,10433842,10434657,10440347,10442265	10430568,10433965,10434690,10440413,10442809	Gene ID= ENSG00000175279.21 TPM= 1.93 Transcript Type= protein_coding
chr1	10456522	10472526	10456522	10472526	-	ENST00000377038.7@DFFA	ENST00000377038.7	protein_coding	10472323,10469177,10467190,10463431,10463058,10456522	10472526,10469338,10467332,10463620,10463209,10461702	Gene ID= ENSG00000160049.11 TPM= 8.69 Transcript Type= protein_coding
chr1	10462468	10472488	10462468	10472488	-	ENST00000377036.2@DFFA	ENST00000377036.2	protein_coding	10472323,10469177,10467190,10463431,10462468	10472488,10469338,10467332,10463620,10463209	Gene ID= ENSG00000160049.11 TPM= 2.9 Transcript Type= protein_coding
chr1	10474887	10630758	10474887	10630758	+	ENST00000356607.8@PEX14	ENST00000356607.8	protein_coding	10474887,10495274,10536213,10599238,10618332,10623019,10624340,10627272,10629531	10475002,10495321,10536297,10599366,10618417,10623121,10624437,10627363,10630758	Gene ID= ENSG00000142655.12 TPM= 19.31 Transcript Type= protein_coding
chr1	10652984	10694479	10652984	10694479	-	ENST00000496432.6@CASZ1	ENST00000496432.6	protein_coding	10694297,10693874,10665083,10659702,10658508,10656646,10655649,10654419,10652984	10694479,10693912,10665571,10660536,10658576,10656736,10655813,10654591,10654218	Gene ID= ENSG00000130940.14 TPM= 5.79 Transcript Type= retained_intron
chr1	10946473	10957285	10946473	10957285	-	transcript1056.chr1.nnic@C1orf127	transcript1056.chr1.nnic	protein_coding	10957194,10957023,10954990,10954019,10949624,10947643,10946473	10957285,10957107,10955186,10954142,10949814,10948844,10946741	Gene ID= ENSG00000175262.14 TPM= 4.34 Transcript Type= NA
chr1	10946471	10957255	10946471	10957255	-	transcript1058.chr1.nic@C1orf127	transcript1058.chr1.nic	protein_coding	10957023,10954990,10954019,10949624,10947643,10946471	10957255,10955186,10954142,10949814,10948844,10946738	Gene ID= ENSG00000175262.14 TPM= 3.38 Transcript Type= NA
chr1	11012634	11024043	11012634	11024043	+	transcript1069.chr1.nnic@TARDBP	transcript1069.chr1.nnic	protein_coding	11012634,11013716,11016844,11018374,11018733,11020429,11022124	11012743,11013965,11017007,11018466,11018873,11020599,11024043	Gene ID= ENSG00000120948.16 TPM= 3.86 Transcript Type= NA
chr1	11012400	11026420	11012400	11026420	+	ENST00000240185.7@TARDBP	ENST00000240185.7	protein_coding	11012400,11013716,11016844,11018733,11020429,11022124	11012743,11013965,11017007,11018873,11020599,11026420	Gene ID= ENSG00000120948.16 TPM= 124.53 Transcript Type= protein_coding
chr1	11012634	11024183	11012634	11024183	+	transcript1064.chr1.nic@AL109811.4	transcript1064.chr1.nic	protein_coding	11012634,11013716,11016844,11018733,11020429,11022124,11023193,11024064	11012743,11013965,11017007,11018873,11020599,11022241,11023329,11024183	Gene ID= ENSG00000277726.4 TPM= 3.86 Transcript Type= NA
chr1	11012634	11024039	11012634	11024039	+	transcript1070.chr1.nnic@AL109811.4	transcript1070.chr1.nnic	protein_coding	11012634,11013716,11016844,11018733,11020429,11022124,11023154	11012743,11013965,11017007,11018873,11020599,11022177,11024039	Gene ID= ENSG00000277726.4 TPM= 3.86 Transcript Type= NA
chr1	11029659	11030528	11029659	11030528	+	ENST00000607145.1@AL109811.3	ENST00000607145.1	antisense_RNA	11029659	11030528	Gene ID= ENSG00000271895.2 TPM= 2.9 Transcript Type= antisense_RNA
chr1	11054589	11060073	11054589	11060073	-	transcript1085.chr1.nnic@SRM	transcript1085.chr1.nnic	protein_coding	11059777,11059225,11058800,11056604,11056011,11054962,11054589	11060073,11059345,11058892,11056757,11056094,11055084,11054885	Gene ID= ENSG00000116649.9 TPM= 36.36 Transcript Type= NA
chr1	11054589	11060024	11054589	11060024	-	ENST00000376957.6@SRM	ENST00000376957.6	protein_coding	11059777,11059225,11058800,11056604,11056011,11055781,11054962,11054589	11060024,11059345,11058892,11056757,11056094,11055926,11055084,11054885	Gene ID= ENSG00000116649.9 TPM= 166.68 Transcript Type= protein_coding
chr1	11066618	11099874	11066618	11099874	-	transcript1088.chr1.nic@EXOSC10	transcript1088.chr1.nic	protein_coding	11099721,11098020,11095758,11091493,11091014,11090554,11088123,11087800,11087448,11082534,11081082,11080764,11080499,11079711,11077601,11077365,11076842,11074231,11073934,11072087,11070900,11069559,11068645,11068008,11066618	11099874,11098156,11095881,11091597,11091179,11090668,11088198,11087910,11087591,11082878,11081238,11080912,11080549,11079822,11077651,11077443,11076948,11074326,11074008,11072171,11070973,11069730,11068706,11068084,11066748	Gene ID= ENSG00000171824.13 TPM= 2.41 Transcript Type= NA
chr1	11066618	11099881	11066618	11099881	-	ENST00000376936.8@EXOSC10	ENST00000376936.8	protein_coding	11099721,11098020,11095758,11091493,11091014,11090554,11088123,11087800,11087448,11082688,11081082,11080764,11080499,11079711,11077601,11077365,11076842,11074231,11073934,11072087,11070900,11069559,11068645,11068008,11066618	11099881,11098156,11095881,11091597,11091179,11090668,11088198,11087910,11087591,11082878,11081238,11080912,11080549,11079822,11077651,11077443,11076948,11074326,11074008,11072171,11070973,11069730,11068706,11068084,11066748	Gene ID= ENSG00000171824.13 TPM= 48.75 Transcript Type= protein_coding
chr1	11106535	11262507	11106535	11262507	-	ENST00000361445.8@MTOR	ENST00000361445.8	protein_coding	11262445,11259248,11258485,11256933,11255992,11253839,11247819,11247625,11243114,11241553,11240303,11238402,11237843,11234143,11233398,11232436,11231300,11230925,11228668,11216148,11213399,11212796,11212312,11210814,11209312,11204561,11199541,11199258,11167442,11157152,11150126,11146676,11144968,11144648,11139533,11139304,11134351,11133080,11130529,11129738,11128855,11128454,11128004,11127624,11127010,11126622,11124498,11121979,11121246,11117004,11115396,11114813,11114318,11112852,11109649,11109290,11108181,11106535	11262507,11259423,11258593,11257165,11256192,11253973,11248094,11247733,11243300,11241681,11240547,11238617,11238048,11234265,11233487,11232528,11231434,11231054,11228918,11216234,11213566,11212908,11212474,11210906,11209458,11204703,11199703,11199403,11167517,11157291,11150226,11146791,11145045,11144755,11139658,11139435,11134466,11133197,11130777,11129838,11128951,11128552,11128126,11127806,11127144,11126796,11124633,11122126,11121368,11117086,11115468,11114887,11114453,11112917,11109729,11109370,11108286,11107500	Gene ID= ENSG00000198793.12 TPM= 46.33 Transcript Type= protein_coding
chr1	11189341	11195981	11189341	11195981	+	ENST00000376819.3@ANGPTL7	ENST00000376819.3	protein_coding	11189341,11192270,11193580,11194461,11194854	11189955,11192370,11193774,11194659,11195981	Gene ID= ENSG00000171819.4 TPM= 1.93 Transcript Type= protein_coding
chr1	11273199	11288433	11273199	11288433	+	transcript1096.chr1.nnic@UBIAD1	transcript1096.chr1.nnic	protein_coding	11273199,11285644,11287928	11274060,11287782,11288433	Gene ID= ENSG00000120942.13 TPM= 1.93 Transcript Type= NA
chr1	11273206	11288434	11273206	11288434	+	ENST00000376810.5@UBIAD1	ENST00000376810.5	protein_coding	11273206,11285644	11274060,11288434	Gene ID= ENSG00000120942.13 TPM= 15.44 Transcript Type= protein_coding
chr1	11298366	11299577	11298366	11299577	+	transcript1107.chr1.nnic@NA	transcript1107.chr1.nnic	NA	11298366	11299577	Gene ID= novel_gene_chr1_1108 TPM= 2.9 Transcript Type= NA
chr1	11648367	11654682	11648367	11654682	-	ENST00000354287.4@FBXO2	ENST00000354287.4	protein_coding	11654319,11650466,11649945,11649779,11649087,11648367	11654682,11650834,11650074,11649874,11649225,11648828	Gene ID= ENSG00000116661.10 TPM= 15.44 Transcript Type= protein_coding
chr1	11654857	11663327	11654857	11663327	+	ENST00000376770.5@FBXO44	ENST00000376770.5	protein_coding	11654857,11655328,11655806,11658267,11658533,11658736,11661130	11654952,11655699,11656100,11658393,11658628,11658871,11663327	Gene ID= ENSG00000132879.13 TPM= 2.9 Transcript Type= protein_coding
chr1	11654880	11663324	11654880	11663324	+	transcript1112.chr1.nic@FBXO44	transcript1112.chr1.nic	protein_coding	11654880,11655806,11658267,11658533,11658736,11661130,11663142	11654952,11656100,11658393,11658628,11658871,11662928,11663324	Gene ID= ENSG00000132879.13 TPM= 1.93 Transcript Type= NA
chr1	11654859	11662289	11654859	11662289	+	transcript1114.chr1.nic@FBXO44	transcript1114.chr1.nic	protein_coding	11654859,11655328,11655806,11658267,11658736,11661130	11654952,11655699,11656100,11658628,11658871,11662289	Gene ID= ENSG00000132879.13 TPM= 2.41 Transcript Type= NA
chr1	11654910	11662291	11654910	11662291	+	ENST00000376762.8@FBXO44	ENST00000376762.8	protein_coding	11654910,11655806,11658267,11658736,11661130	11654952,11656100,11658364,11658871,11662291	Gene ID= ENSG00000132879.13 TPM= 3.38 Transcript Type= protein_coding
chr1	11664248	11674354	11664248	11674354	+	transcript1128.chr1.nnic@FBXO6	transcript1128.chr1.nnic	protein_coding	11664248,11668656,11671266,11671928,11673277,11673615	11664423,11668944,11671392,11672023,11673412,11674354	Gene ID= ENSG00000116663.10 TPM= 8.69 Transcript Type= NA
chr1	11664124	11674354	11664124	11674354	+	ENST00000376753.8@FBXO6	ENST00000376753.8	protein_coding	11664124,11668656,11671266,11671928,11673277,11673615	11664255,11668944,11671392,11672023,11673412,11674354	Gene ID= ENSG00000116663.10 TPM= 30.89 Transcript Type= protein_coding
chr1	11674480	11691650	11674480	11691650	-	ENST00000235310.7@MAD2L2	ENST00000235310.7	protein_coding	11691413,11681738,11681039,11680562,11680353,11677543,11676848,11676046,11675658,11675082,11674480	11691650,11682016,11681438,11680613,11680471,11677614,11676948,11676140,11675731,11675174,11674816	Gene ID= ENSG00000116670.14 TPM= 69.5 Transcript Type= protein_coding
chr1	11736132	11750765	11736132	11750765	+	transcript1139.chr1.nic@AGTRAP	transcript1139.chr1.nic	protein_coding	11736132,11745803,11748415,11750077	11736235,11747545,11748610,11750765	Gene ID= ENSG00000177674.15 TPM= 5.79 Transcript Type= NA
chr1	11736147	11750771	11736147	11750771	+	ENST00000376629.8@AGTRAP	ENST00000376629.8	protein_coding	11736147,11745803,11747440,11748415,11750077	11736235,11745837,11747545,11748589,11750771	Gene ID= ENSG00000177674.15 TPM= 13.03 Transcript Type= protein_coding
chr1	11736155	11750765	11736155	11750765	+	ENST00000314340.9@AGTRAP	ENST00000314340.9	protein_coding	11736155,11745803,11747440,11748415,11750077	11736235,11745837,11747545,11748610,11750765	Gene ID= ENSG00000177674.15 TPM= 79.64 Transcript Type= protein_coding
chr1	11787812	11789585	11787812	11789585	+	ENST00000482358.1@C1orf167	ENST00000482358.1	protein_coding	11787812,11788243,11788652,11789270	11788047,11788378,11788746,11789585	Gene ID= ENSG00000215910.7 TPM= 4.83 Transcript Type= processed_transcript
chr1	11786603	11806920	11786603	11806920	-	ENST00000376590.8@MTHFR	ENST00000376590.8	protein_coding	11805888,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11786603	11806920,11803129,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898	Gene ID= ENSG00000177000.11 TPM= 3.38 Transcript Type= protein_coding
chr1	11785732	11805413	11785732	11805413	-	ENST00000376585.6@MTHFR	ENST00000376585.6	protein_coding	11805380,11803405,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11785732	11805413,11804532,11803129,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898	Gene ID= ENSG00000177000.11 TPM= 8.21 Transcript Type= protein_coding
chr1	11790068	11805937	11790068	11805937	-	transcript1145.chr1.nic@MTHFR	transcript1145.chr1.nic	protein_coding	11805347,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11790068	11805937,11803129,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898	Gene ID= ENSG00000177000.11 TPM= 1.93 Transcript Type= NA
chr1	11845709	11847783	11845709	11847783	-	ENST00000376480.7@NPPA	ENST00000376480.7	protein_coding	11847562,11847113,11845709	11847783,11847439,11846014	Gene ID= ENSG00000175206.10 TPM= 11.58 Transcript Type= protein_coding
chr1	11877421	11880234	11877421	11880234	-	transcript1154.chr1.nnic@NA	transcript1154.chr1.nnic	NA	11877421	11880234	Gene ID= novel_gene_chr1_1155 TPM= 4.83 Transcript Type= NA
chr1	11919590	11923014	11919590	11923014	-	transcript1184.chr1.nnic@NA	transcript1184.chr1.nnic	NA	11919590	11923014	Gene ID= novel_gene_chr1_1185 TPM= 5.15 Transcript Type= NA
chr1	11920065	11926441	11920065	11926441	-	transcript1175.chr1.nnic@KIAA2013	transcript1175.chr1.nnic	protein_coding	11925205,11923191,11922636,11920065	11926441,11923489,11923115,11920332	Gene ID= ENSG00000116685.15 TPM= 8.04 Transcript Type= NA
chr1	11919591	11926423	11919591	11926423	-	ENST00000376572.7@KIAA2013	ENST00000376572.7	protein_coding	11925205,11922636,11919591	11926423,11923489,11920332	Gene ID= ENSG00000116685.15 TPM= 71.75 Transcript Type= protein_coding
chr1	11922175	11926428	11922175	11926428	-	ENST00000376576.3@KIAA2013	ENST00000376576.3	protein_coding	11925205,11922175	11926428,11923489	Gene ID= ENSG00000116685.15 TPM= 16.41 Transcript Type= protein_coding
chr1	11934753	11975537	11934753	11975537	+	ENST00000196061.4@PLOD1	ENST00000196061.4	protein_coding	11934753,11947976,11949773,11950357,11952623,11954830,11956917,11957842,11958516,11960646,11963532,11964175,11964644,11965480,11966251,11966987,11970670,11972872,11974653	11934855,11948067,11949906,11950520,11952735,11954893,11957014,11957943,11958647,11960767,11963636,11964300,11964785,11965593,11966316,11967091,11970816,11972997,11975537	Gene ID= ENSG00000083444.16 TPM= 50.2 Transcript Type= protein_coding
chr1	11980201	12013508	11980201	12013508	+	transcript1159.chr1.nic@MFN2	transcript1159.chr1.nic	protein_coding	11980201,11981970,11982523,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496	11980484,11982114,11982590,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013508	Gene ID= ENSG00000116688.16 TPM= 95.76 Transcript Type= NA
chr1	11980181	12013514	11980181	12013514	+	ENST00000444836.5@MFN2	ENST00000444836.5	protein_coding	11980181,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496	11980484,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013514	Gene ID= ENSG00000116688.16 TPM= 63.9 Transcript Type= protein_coding
chr1	11980312	12013508	11980312	12013508	+	ENST00000235329.9@MFN2	ENST00000235329.9	protein_coding	11980312,11981970,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496	11980484,11982114,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013508	Gene ID= ENSG00000116688.16 TPM= 156.57 Transcript Type= protein_coding
chr1	12019456	12032039	12019456	12032039	+	transcript1189.chr1.nic@MIIP	transcript1189.chr1.nic	protein_coding	12019456,12021645,12022095,12022833,12029033,12029223,12030028,12031266,12031722	12019552,12021840,12022442,12022917,12029141,12029894,12030124,12031403,12032039	Gene ID= ENSG00000116691.10 TPM= 3.86 Transcript Type= NA
chr1	12019456	12032039	12019456	12032039	+	transcript1190.chr1.nic@MIIP	transcript1190.chr1.nic	protein_coding	12019456,12021645,12022833,12029033,12029223,12029765,12030028,12031266,12031722	12019552,12022442,12022917,12029141,12029281,12029894,12030124,12031403,12032039	Gene ID= ENSG00000116691.10 TPM= 2.9 Transcript Type= NA
chr1	12019466	12032045	12019466	12032045	+	ENST00000235332.5@MIIP	ENST00000235332.5	protein_coding	12019466,12021645,12022095,12022833,12029033,12029223,12029765,12030028,12031266,12031722	12019552,12021840,12022442,12022917,12029141,12029281,12029894,12030124,12031403,12032045	Gene ID= ENSG00000116691.10 TPM= 54.06 Transcript Type= protein_coding
chr1	12171178	12174403	12171178	12174403	-	transcript1195.chr1.nnic@NA	transcript1195.chr1.nnic	NA	12171178	12174403	Gene ID= novel_gene_chr1_1196 TPM= 3.86 Transcript Type= NA
chr1	12230016	12263628	12230016	12263628	+	transcript1197.chr1.nic@VPS13D	transcript1197.chr1.nic	protein_coding	12230016,12234191,12242513,12244246,12244537,12249223,12253722,12256333,12256987,12257935,12260693,12260948,12261901	12230120,12234363,12242590,12244436,12244617,12249339,12253826,12256503,12257087,12258103,12260794,12261149,12263628	Gene ID= ENSG00000048707.13 TPM= 4.83 Transcript Type= NA
chr1	12464940	12512047	12464940	12512047	+	ENST00000543766.2@VPS13D	ENST00000543766.2	protein_coding	12464940,12497500,12506853,12508893	12465249,12497631,12507093,12512047	Gene ID= ENSG00000048707.13 TPM= 5.79 Transcript Type= protein_coding
chr1	12230016	12235598	12230016	12235598	+	transcript1201.chr1.nic@VPS13D	transcript1201.chr1.nic	protein_coding	12230016,12234191	12230120,12235598	Gene ID= ENSG00000048707.13 TPM= 1.93 Transcript Type= NA
chr1	12567996	12617815	12567996	12617815	-	transcript1202.chr1.nnic@DHRS3	transcript1202.chr1.nnic	protein_coding	12617154,12580521,12579293,12578718,12572728,12567996	12617815,12580666,12579412,12578956,12572853,12568424	Gene ID= ENSG00000162496.8 TPM= 23.17 Transcript Type= NA
chr1	12567910	12617731	12567910	12617731	-	ENST00000616661.4@DHRS3	ENST00000616661.4	protein_coding	12617154,12580523,12579293,12578718,12572728,12567910	12617731,12580666,12579412,12578956,12572853,12568424	Gene ID= ENSG00000162496.8 TPM= 44.4 Transcript Type= protein_coding
chr1	13474977	13514048	13474977	13514048	-	ENST00000376085.3@LRRC38	ENST00000376085.3	protein_coding	13512963,13474977	13514048,13476099	Gene ID= ENSG00000162494.5 TPM= 54.06 Transcript Type= protein_coding
chr1	13583465	13617957	13583465	13617957	+	ENST00000294489.10@PDPN	ENST00000294489.10	protein_coding	13583465,13607173,13610387,13613687,13614300,13615905	13584100,13607306,13610516,13613725,13614411,13617957	Gene ID= ENSG00000162493.16 TPM= 12.55 Transcript Type= protein_coding
chr1	13704855	13825079	13704855	13825079	+	ENST00000235372.11@PRDM2	ENST00000235372.11	protein_coding	13704855,13715541,13731000,13732779,13742005,13749361,13773078,13778418,13816427,13823159	13705645,13715614,13731117,13732882,13742157,13749487,13773188,13782831,13816570,13825079	Gene ID= ENSG00000116731.22 TPM= 3.06 Transcript Type= protein_coding
chr1	13749403	13788079	13749403	13788079	+	ENST00000413440.5@PRDM2	ENST00000413440.5	protein_coding	13749403,13773078,13778418,13786515	13749487,13773188,13782831,13788079	Gene ID= ENSG00000116731.22 TPM= 5.96 Transcript Type= protein_coding
chr1	13749435	13823499	13749435	13823499	+	ENST00000503842.5@PRDM2	ENST00000503842.5	protein_coding	13749435,13769118,13773078,13816427,13823159	13749487,13769173,13773188,13816570,13823499	Gene ID= ENSG00000116731.22 TPM= 3.86 Transcript Type= protein_coding
chr1	13749415	13787657	13749415	13787657	+	ENST00000343137.8@PRDM2	ENST00000343137.8	protein_coding	13749415,13769118,13773078,13778418,13786515	13749487,13769173,13773188,13782831,13787657	Gene ID= ENSG00000116731.22 TPM= 11.27 Transcript Type= protein_coding
chr1	13750778	13751960	13750778	13751960	-	transcript1232.chr1.nnic@NA	transcript1232.chr1.nnic	NA	13750778	13751960	Gene ID= novel_gene_chr1_1233 TPM= 2.9 Transcript Type= NA
chr1	13820273	13823072	13820273	13823072	+	transcript1230.chr1.nnic@NA	transcript1230.chr1.nnic	NA	13820273	13823072	Gene ID= novel_gene_chr1_1231 TPM= 1.93 Transcript Type= NA
chr1	15409895	15430343	15409895	15430343	+	ENST00000375980.8@EFHD2	ENST00000375980.8	protein_coding	15409895,15425871,15427150,15428593	15410279,15426018,15427284,15430343	Gene ID= ENSG00000142634.12 TPM= 11.58 Transcript Type= protein_coding
chr1	15492270	15524295	15492270	15524295	-	ENST00000333868.9@CASP9	ENST00000333868.9	protein_coding	15524069,15518110,15507873,15506899,15505990,15504611,15495273,15493892,15492270	15524295,15518395,15507907,15507075,15506079,15504758,15495452,15494001,15493035	Gene ID= ENSG00000132906.17 TPM= 5.79 Transcript Type= protein_coding
chr1	15526813	15571733	15526813	15571733	+	ENST00000375847.7@DNAJC16	ENST00000375847.7	protein_coding	15526813,15529088,15534237,15536475,15544399,15546767,15548270,15559526,15562142,15563929,15564283,15565919,15566082,15567099,15567778	15526958,15529272,15534303,15536814,15544583,15546871,15548428,15559656,15562325,15564111,15564359,15565999,15566180,15567269,15571733	Gene ID= ENSG00000116138.12 TPM= 14.48 Transcript Type= protein_coding
chr1	15572353	15585110	15572353	15585110	-	ENST00000375826.3@AGMAT	ENST00000375826.3	protein_coding	15584696,15583193,15580094,15578859,15577685,15574757,15572353	15585110,15583395,15580142,15579054,15577864,15574841,15573724	Gene ID= ENSG00000116771.5 TPM= 1.93 Transcript Type= protein_coding
chr1	15634541	15637452	15634541	15637452	-	transcript1270.chr1.nnic@NA	transcript1270.chr1.nnic	NA	15634541	15637452	Gene ID= novel_gene_chr1_1271 TPM= 1.93 Transcript Type= NA
chr1	15664549	15667216	15664549	15667216	+	transcript1268.chr1.nnic@NA	transcript1268.chr1.nnic	NA	15664549	15667216	Gene ID= novel_gene_chr1_1269 TPM= 5.79 Transcript Type= NA
chr1	15684292	15734769	15684292	15734769	+	transcript1253.chr1.nic@PLEKHM2	transcript1253.chr1.nic	protein_coding	15684292,15716237,15716707,15717893,15718538,15719734,15721329,15725317,15727014,15728079,15728267,15728669,15729102,15729797,15730532,15731192,15731950,15732350,15732612,15733797	15684618,15716343,15716816,15717992,15718625,15719920,15721388,15725545,15727832,15728148,15728357,15728733,15729190,15729929,15730722,15731257,15732048,15732529,15732728,15734769	Gene ID= ENSG00000116786.11 TPM= 36.59 Transcript Type= NA
chr1	15684332	15734769	15684332	15734769	+	ENST00000375799.7@PLEKHM2	ENST00000375799.7	protein_coding	15684332,15716237,15716707,15717893,15718538,15719734,15721329,15725317,15727014,15728079,15728267,15728669,15729102,15729797,15730532,15731192,15731889,15732350,15732612,15733797	15684618,15716343,15716816,15717992,15718625,15719920,15721388,15725545,15727832,15728148,15728357,15728733,15729190,15729929,15730722,15731257,15732048,15732529,15732728,15734769	Gene ID= ENSG00000116786.11 TPM= 254.75 Transcript Type= protein_coding
chr1	15758419	15786594	15758419	15786594	+	ENST00000375766.7@FBLIM1	ENST00000375766.7	protein_coding	15758419,15764496,15764964,15767376,15768528,15770409,15774618,15777170,15784548	15758848,15764685,15765233,15767563,15768630,15770578,15774796,15777287,15786594	Gene ID= ENSG00000162458.12 TPM= 2.9 Transcript Type= protein_coding
chr1	15834073	15835922	15834073	15835922	-	transcript1297.chr1.nnic@NA	transcript1297.chr1.nnic	NA	15834073	15835922	Gene ID= novel_gene_chr1_1298 TPM= 14.48 Transcript Type= NA
chr1	15847709	15928672	15847709	15928672	+	transcript1285.chr1.nic@SPEN	transcript1285.chr1.nic	protein_coding	15847709,15872816,15876202,15909321,15911101,15916128,15918926,15919404,15920870,15922249,15928091	15848150,15873136,15876678,15909481,15911301,15916279,15919051,15919517,15920983,15922349,15928672	Gene ID= ENSG00000065526.10 TPM= 3.38 Transcript Type= NA
chr1	15847807	15931023	15847807	15931023	+	transcript1288.chr1.nic@SPEN	transcript1288.chr1.nic	protein_coding	15847807,15872816,15876202,15909321,15911101,15916128,15918926,15919404,15920870,15922249,15928091	15848150,15874395,15876678,15909481,15911301,15916279,15919051,15919517,15920983,15922349,15931023	Gene ID= ENSG00000065526.10 TPM= 2.9 Transcript Type= NA
chr1	15847793	15910151	15847793	15910151	+	transcript1292.chr1.nic@SPEN	transcript1292.chr1.nic	protein_coding	15847793,15872816,15876202,15909321	15848150,15874395,15876678,15910151	Gene ID= ENSG00000065526.10 TPM= 3.38 Transcript Type= NA
chr1	15847864	15940460	15847864	15940460	+	ENST00000375759.7@SPEN	ENST00000375759.7	protein_coding	15847864,15872816,15876202,15909321,15911101,15916128,15918926,15919404,15920870,15922249,15928091,15937163,15937812,15938718,15939296	15848150,15873136,15876678,15909481,15911301,15916279,15919051,15919517,15920983,15922349,15936266,15937645,15938006,15938876,15940460	Gene ID= ENSG00000065526.10 TPM= 16.41 Transcript Type= protein_coding
chr1	15941871	15976132	15941871	15976132	-	ENST00000375733.6@ZBTB17	ENST00000375733.6	protein_coding	15975983,15973039,15948291,15946935,15946154,15945715,15944937,15944697,15944300,15943808,15943599,15943399,15943064,15942529,15942331,15941871	15976132,15973125,15948497,15947123,15946294,15945840,15945202,15944839,15944600,15943895,15943715,15943519,15943194,15942738,15942441,15942252	Gene ID= ENSG00000116809.11 TPM= 2.9 Transcript Type= protein_coding
chr1	15941869	15976126	15941869	15976126	-	ENST00000375743.8@ZBTB17	ENST00000375743.8	protein_coding	15975983,15973039,15948291,15946935,15946154,15945715,15944937,15944697,15944300,15943808,15943599,15943399,15943064,15942529,15942331,15941869	15976126,15973125,15948497,15947123,15946294,15945840,15945202,15944839,15944600,15943895,15943715,15943519,15943194,15942738,15942420,15942252	Gene ID= ENSG00000116809.11 TPM= 68.22 Transcript Type= protein_coding
chr1	15941871	15976079	15941871	15976079	-	ENST00000537142.5@ZBTB17	ENST00000537142.5	protein_coding	15975983,15973039,15946935,15946154,15945715,15944937,15944697,15944300,15943808,15943599,15943399,15943064,15942529,15942331,15941871	15976079,15973125,15947123,15946316,15945840,15945202,15944839,15944600,15943895,15943715,15943519,15943194,15942738,15942420,15942252	Gene ID= ENSG00000116809.11 TPM= 3.54 Transcript Type= protein_coding
chr1	16014028	16018790	16014028	16018790	-	ENST00000311890.13@HSPB7	ENST00000311890.13	protein_coding	16017765,16017074,16014028	16018790,16017207,16015759	Gene ID= ENSG00000173641.17 TPM= 833.21 Transcript Type= protein_coding
chr1	16014023	16015394	16014023	16015394	-	transcript1351.chr1.nnic@HSPB7	transcript1351.chr1.nnic	protein_coding	16014465,16014023	16015394,16014188	Gene ID= ENSG00000173641.17 TPM= 60.81 Transcript Type= NA
chr1	16014029	16015449	16014029	16015449	-	transcript1354.chr1.nnic@HSPB7	transcript1354.chr1.nnic	protein_coding	16015162,16014029	16015449,16014089	Gene ID= ENSG00000173641.17 TPM= 10.62 Transcript Type= NA
chr1	16014028	16018043	16014028	16018043	-	ENST00000442459.2@HSPB7	ENST00000442459.2	protein_coding	16017074,16014028	16018043,16015759	Gene ID= ENSG00000173641.17 TPM= 285.12 Transcript Type= retained_intron
chr1	16014028	16018041	16014028	16018041	-	ENST00000411503.5@HSPB7	ENST00000411503.5	protein_coding	16017765,16017089,16014028	16018041,16017207,16015759	Gene ID= ENSG00000173641.17 TPM= 245.53 Transcript Type= protein_coding
chr1	16015499	16018005	16015499	16018005	-	ENST00000406363.2@HSPB7	ENST00000406363.2	protein_coding	16017765,16017074,16015499	16018005,16017219,16015759	Gene ID= ENSG00000173641.17 TPM= 5.79 Transcript Type= protein_coding
chr1	16014913	16016776	16014913	16016776	-	transcript1363.chr1.nnic@NA	transcript1363.chr1.nnic	NA	16014913	16016776	Gene ID= novel_gene_chr1_1364 TPM= 154.84 Transcript Type= NA
chr1	16228674	16230726	16228674	16230726	-	transcript1375.chr1.nnic@NA	transcript1375.chr1.nnic	NA	16228674	16230726	Gene ID= novel_gene_chr1_1376 TPM= 2.41 Transcript Type= NA
chr1	16229921	16231349	16229921	16231349	+	transcript1373.chr1.nnic@NA	transcript1373.chr1.nnic	NA	16229921	16231349	Gene ID= novel_gene_chr1_1374 TPM= 8.21 Transcript Type= NA
chr1	16250655	16352463	16250655	16352463	-	transcript1381.chr1.nnic@FBXO42	transcript1381.chr1.nnic	protein_coding	16352255,16316437,16315169,16305803,16294783,16256606,16255711,16253635,16253096,16252288,16250655	16352463,16316568,16315435,16305919,16294917,16256759,16255821,16253731,16253152,16252404,16251785	Gene ID= ENSG00000037637.10 TPM= 4.83 Transcript Type= NA
chr1	16246839	16352463	16246839	16352463	-	transcript1383.chr1.nnic@FBXO42	transcript1383.chr1.nnic	protein_coding	16352255,16316437,16315169,16294783,16256606,16255711,16253635,16253096,16252288,16246839	16352463,16316568,16315435,16294917,16256759,16255821,16253731,16253152,16252404,16251785	Gene ID= ENSG00000037637.10 TPM= 1.93 Transcript Type= NA
chr1	16246839	16352454	16246839	16352454	-	ENST00000375592.7@FBXO42	ENST00000375592.7	protein_coding	16352255,16315169,16305803,16294783,16256606,16255711,16253635,16253096,16252288,16246839	16352454,16315435,16305919,16294917,16256759,16255821,16253731,16253152,16252404,16251785	Gene ID= ENSG00000037637.10 TPM= 4.83 Transcript Type= protein_coding
chr1	16367225	16398145	16367225	16398145	+	ENST00000401089.3@SZRD1	ENST00000401089.3	protein_coding	16367225,16393228,16395038	16367308,16393482,16398145	Gene ID= ENSG00000055070.16 TPM= 90.74 Transcript Type= protein_coding
chr1	16440672	16460078	16440672	16460078	+	ENST00000337132.9@NECAP2	ENST00000337132.9	protein_coding	16440672,16443632,16447870,16448060,16449093,16451838,16455818,16458842	16440853,16443732,16447974,16448141,16449201,16452015,16455893,16460078	Gene ID= ENSG00000157191.19 TPM= 17.38 Transcript Type= protein_coding
chr1	16514122	16514285	16514122	16514285	-	ENST00000383925.1@RNU1-1	ENST00000383925.1	snRNA	16514122	16514285	Gene ID= ENSG00000206652.1 TPM= 1.93 Transcript Type= snRNA
chr1	16618256	16644718	16618256	16644718	-	transcript1423.chr1.nic@CROCCP2	transcript1423.chr1.nic	transcribed_unprocessed_pseudogene	16644646,16643028,16642767,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618256	16644718,16643145,16642850,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620245,16619103	Gene ID= ENSG00000215908.10 TPM= 3.86 Transcript Type= NA
chr1	16618256	16644718	16618256	16644718	-	transcript1424.chr1.nnic@CROCCP2	transcript1424.chr1.nnic	transcribed_unprocessed_pseudogene	16644646,16643028,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618256	16644718,16643145,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620024,16619103	Gene ID= ENSG00000215908.10 TPM= 1.93 Transcript Type= NA
chr1	16618256	16644716	16618256	16644716	-	transcript1432.chr1.nnic@CROCCP2	transcript1432.chr1.nnic	transcribed_unprocessed_pseudogene	16644646,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618256	16644716,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620038,16619103	Gene ID= ENSG00000215908.10 TPM= 3.86 Transcript Type= NA
chr1	16888537	16889500	16888537	16889500	-	transcript1446.chr1.nnic@NA	transcript1446.chr1.nnic	NA	16888537	16889500	Gene ID= novel_gene_chr1_1447 TPM= 2.9 Transcript Type= NA
chr1	16888542	16889649	16888542	16889649	-	ENST00000457075.1@BX284668.5	ENST00000457075.1	lincRNA	16889548,16888542	16889649,16888785	Gene ID= ENSG00000238142.1 TPM= 1.93 Transcript Type= lincRNA
chr1	16974502	16980835	16974502	16980835	-	ENST00000375535.3@MFAP2	ENST00000375535.3	protein_coding	16980587,16978237,16977109,16976897,16976708,16976501,16975643,16975269,16974502	16980835,16978314,16977198,16976923,16976794,16976545,16975730,16975342,16975023	Gene ID= ENSG00000117122.13 TPM= 1.93 Transcript Type= protein_coding
chr1	16985958	17011985	16985958	17011985	-	transcript1456.chr1.nic@ATP13A2	transcript1456.chr1.nic	protein_coding	17011729,17005684,17005374,17005014,17004707,17004332,17002296,17002034,17000400,17000246,17000011,16997020,16996386,16996254,16995976,16993629,16992486,16992243,16992009,16991734,16990127,16989691,16988322,16988138,16987046,16986805,16986463,16985958	17011985,17005778,17005556,17005072,17004821,17004411,17002373,17002103,17000534,17000312,17000142,16997175,16996496,16996300,16996164,16993835,16992581,16992402,16992129,16991858,16990287,16989770,16988474,16988234,16987269,16986956,16986632,16986358	Gene ID= ENSG00000159363.17 TPM= 6.44 Transcript Type= NA
chr1	16985958	17011928	16985958	17011928	-	ENST00000452699.5@ATP13A2	ENST00000452699.5	protein_coding	17011729,17005684,17005374,17005014,17004707,17004332,17002296,17002034,17000400,17000246,17000011,16997020,16996386,16996254,16995976,16993629,16992486,16992243,16992009,16991734,16990127,16989887,16989691,16988322,16988138,16987046,16986805,16986463,16985958	17011928,17005778,17005556,17005072,17004821,17004411,17002373,17002103,17000534,17000312,17000142,16997175,16996496,16996300,16996164,16993835,16992581,16992402,16992129,16991858,16990287,16990003,16989770,16988474,16988234,16987269,16986956,16986632,16986358	Gene ID= ENSG00000159363.17 TPM= 18.02 Transcript Type= protein_coding
chr1	16985958	17011772	16985958	17011772	-	ENST00000326735.12@ATP13A2	ENST00000326735.12	protein_coding	17011729,17005684,17005374,17005014,17004692,17004332,17002296,17002034,17000400,17000246,17000011,16997020,16996386,16996254,16995976,16993629,16992486,16992243,16992009,16991734,16990127,16989887,16989691,16988322,16988138,16987046,16986805,16986463,16985958	17011772,17005778,17005556,17005072,17004821,17004411,17002373,17002103,17000534,17000312,17000142,16997175,16996496,16996300,16996164,16993835,16992581,16992402,16992129,16991858,16990287,16990003,16989770,16988474,16988234,16987269,16986956,16986632,16986358	Gene ID= ENSG00000159363.17 TPM= 9.33 Transcript Type= protein_coding
chr1	17018722	17054170	17018722	17054170	-	ENST00000375499.7@SDHB	ENST00000375499.7	protein_coding	17053948,17044761,17033060,17028600,17027749,17023973,17022608,17018722	17054170,17044888,17033145,17028736,17027865,17024074,17022730,17018958	Gene ID= ENSG00000117118.9 TPM= 134.18 Transcript Type= protein_coding
chr1	17066761	17119435	17066761	17119435	-	ENST00000375486.8@PADI2	ENST00000375486.8	protein_coding	17119280,17104878,17102987,17095909,17093567,17092408,17086521,17084599,17083726,17082545,17079264,17075679,17074856,17071406,17070088,17066761	17119435,17105061,17103059,17095970,17093684,17092533,17086699,17084702,17083837,17082652,17079415,17075823,17074949,17071491,17070216,17069277	Gene ID= ENSG00000117115.12 TPM= 585.94 Transcript Type= protein_coding
chr1	17079031	17119435	17079031	17119435	-	ENST00000375481.1@PADI2	ENST00000375481.1	protein_coding	17119280,17104878,17102987,17095909,17093567,17092408,17086521,17084599,17083726,17082545,17079031	17119435,17105061,17103059,17095970,17093684,17092533,17086699,17084702,17083837,17082652,17079415	Gene ID= ENSG00000117115.12 TPM= 9.17 Transcript Type= protein_coding
chr1	17408507	17408801	17408507	17408801	+	transcript1492.chr1.nnic@NA	transcript1492.chr1.nnic	NA	17408507	17408801	Gene ID= novel_gene_chr1_1493 TPM= 3.86 Transcript Type= NA
chr1	17539678	17697868	17539678	17697868	+	transcript1498.chr1.nic@ARHGEF10L	transcript1498.chr1.nic	protein_coding	17539678,17580553,17587460,17588446,17602127,17603508,17607802,17616094,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17539950,17580632,17587645,17588479,17602218,17603591,17607977,17616202,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697868	Gene ID= ENSG00000074964.16 TPM= 59.42 Transcript Type= NA
chr1	17618344	17697868	17618344	17697868	+	transcript1510.chr1.nic@ARHGEF10L	transcript1510.chr1.nic	protein_coding	17618344,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697868	Gene ID= ENSG00000074964.16 TPM= 136.8 Transcript Type= NA
chr1	17618316	17697868	17618316	17697868	+	ENST00000375408.7@ARHGEF10L	ENST00000375408.7	protein_coding	17618316,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697868	Gene ID= ENSG00000074964.16 TPM= 28.21 Transcript Type= protein_coding
chr1	17539700	17542148	17539700	17542148	+	transcript1531.chr1.nnic@NA	transcript1531.chr1.nnic	NA	17539700	17542148	Gene ID= novel_gene_chr1_1532 TPM= 1.93 Transcript Type= NA
chr1	17689808	17690987	17689808	17690987	+	transcript1533.chr1.nnic@NA	transcript1533.chr1.nnic	NA	17689808	17690987	Gene ID= novel_gene_chr1_1534 TPM= 1.93 Transcript Type= NA
chr1	18871432	18902781	18871432	18902781	-	ENST00000375341.7@ALDH4A1	ENST00000375341.7	protein_coding	18902462,18890012,18889362,18886464,18885473,18883279,18883124,18881700,18879300,18877416,18877208,18876315,18875382,18874463,18871432	18902781,18890105,18889454,18886511,18885628,18883428,18883198,18881887,18879373,18877612,18877255,18876467,18875503,18874581,18872957	Gene ID= ENSG00000159423.16 TPM= 101.36 Transcript Type= protein_coding
chr1	18871430	18902553	18871430	18902553	-	ENST00000290597.9@ALDH4A1	ENST00000290597.9	protein_coding	18902462,18890012,18889362,18886464,18885473,18883279,18883124,18881700,18879300,18877416,18877208,18876315,18875382,18874463,18872804,18871430	18902553,18890105,18889454,18886511,18885628,18883428,18883198,18881887,18879373,18877612,18877255,18876467,18875503,18874581,18872957,18871790	Gene ID= ENSG00000159423.16 TPM= 5.79 Transcript Type= protein_coding
chr1	18901951	18903371	18901951	18903371	+	transcript1539.chr1.nnic@NA	transcript1539.chr1.nnic	NA	18901951,18902810	18902145,18903371	Gene ID= novel_gene_chr1_1540 TPM= 1.93 Transcript Type= NA
chr1	19074506	19210276	19074506	19210276	-	ENST00000375254.7@UBR4	ENST00000375254.7	protein_coding	19210073,19201718,19199651,19198799,19198541,19197947,19197670,19197141,19193433,19192481,19192188,19187441,19187164,19186540,19185099,19184016,19183811,19179051,19177461,19176592,19174954,19174319,19173439,19173181,19172864,19170762,19169435,19168027,19167022,19165656,19165249,19164799,19164253,19163764,19162420,19161827,19161589,19160917,19160111,19157815,19156767,19156271,19155441,19154918,19153768,19153301,19152313,19151643,19150577,19148563,19147993,19146826,19145793,19144786,19143980,19141647,19141347,19140788,19139083,19138007,19128978,19128211,19127623,19126446,19124541,19122833,19121934,19121189,19120180,19119557,19118872,19117823,19117221,19115398,19114811,19113945,19113699,19112524,19110742,19110380,19110096,19106837,19106569,19105733,19105048,19104585,19104084,19101520,19100376,19099597,19097193,19096523,19095545,19094906,19093949,19093313,19092819,19088759,19087816,19086679,19086145,19084504,19081349,19077976,19076740,19074506	19210276,19201815,19199754,19198928,19198680,19198049,19197811,19197265,19193557,19192540,19192378,19187540,19187301,19186657,19185286,19184175,19183896,19179220,19177743,19176727,19175033,19174447,19173621,19173306,19173093,19170883,19169532,19168184,19167231,19165757,19165349,19164997,19164441,19163827,19162611,19161897,19161736,19161147,19160281,19157997,19156925,19156423,19155668,19155075,19153939,19153502,19152476,19151859,19150793,19148626,19148127,19147000,19145933,19144907,19144091,19141777,19141524,19140892,19139220,19138181,19129074,19128318,19127739,19126655,19124690,19123060,19122012,19121434,19120348,19119701,19118957,19117910,19117414,19115637,19114949,19114070,19113827,19112867,19110832,19110464,19110223,19106966,19106726,19105842,19105189,19104666,19104257,19101641,19100573,19099677,19097280,19096650,19095652,19095025,19094139,19093486,19092918,19088977,19087929,19086821,19086270,19084698,19081573,19078066,19076902,19074896	Gene ID= ENSG00000127481.14 TPM= 71.43 Transcript Type= protein_coding
chr1	19146931	19149823	19146931	19149823	+	transcript1543.chr1.nnic@NA	transcript1543.chr1.nnic	NA	19146931	19149823	Gene ID= novel_gene_chr1_1544 TPM= 1.93 Transcript Type= NA
chr1	19215664	19251552	19215664	19251552	-	ENST00000477853.5@EMC1	ENST00000477853.5	protein_coding	19251415,19244906,19243950,19243614,19242345,19241016,19240297,19239818,19239231,19238795,19238017,19237142,19235130,19232936,19232624,19231261,19230844,19227313,19223396,19222624,19220764,19219569,19215664	19251552,19245030,19244015,19243707,19242473,19241142,19240446,19239985,19239302,19238857,19238139,19237238,19235252,19233135,19232773,19231422,19230963,19227450,19223569,19222834,19220848,19219698,19219482	Gene ID= ENSG00000127463.14 TPM= 9.65 Transcript Type= protein_coding
chr1	19251816	19260126	19251816	19260126	+	transcript1552.chr1.nnic@MRTO4	transcript1552.chr1.nnic	protein_coding	19251816,19254782,19255948,19257064,19257454,19257833,19258477,19258681,19260042	19251863,19254840,19256051,19257145,19257521,19257984,19258553,19258977,19260126	Gene ID= ENSG00000053372.4 TPM= 2.25 Transcript Type= NA
chr1	19251539	19260128	19251539	19260128	+	ENST00000330263.4@MRTO4	ENST00000330263.4	protein_coding	19251539,19254782,19255948,19257064,19257454,19257833,19258477,19258681	19251863,19254840,19256051,19257145,19257521,19257984,19258553,19260128	Gene ID= ENSG00000053372.4 TPM= 10.94 Transcript Type= protein_coding
chr1	19251824	19259438	19251824	19259438	+	transcript1559.chr1.nic@MRTO4	transcript1559.chr1.nic	protein_coding	19251824,19254782,19255948,19257064,19257454,19257833,19258477,19258681	19252248,19254840,19256051,19257145,19257521,19257984,19258553,19259438	Gene ID= ENSG00000053372.4 TPM= 2.25 Transcript Type= NA
chr1	19282558	19289250	19282558	19289250	-	ENST00000361640.4@AKR7A3	ENST00000361640.4	protein_coding	19288496,19286185,19285888,19285018,19284686,19283996,19282558	19289250,19286372,19285992,19285114,19284785,19284125,19282892	Gene ID= ENSG00000162482.4 TPM= 2.9 Transcript Type= protein_coding
chr1	19303965	19312146	19303965	19312146	-	ENST00000235835.7@AKR7A2	ENST00000235835.7	protein_coding	19311827,19308455,19308158,19307314,19307002,19306018,19303965	19312146,19308642,19308262,19307410,19307101,19306147,19304386	Gene ID= ENSG00000053371.12 TPM= 93.64 Transcript Type= protein_coding
chr1	19312311	19329296	19312311	19329296	+	transcript1580.chr1.nic@PQLC2	transcript1580.chr1.nic	protein_coding	19312311,19312729,19317600,19324633,19325495,19326245,19326531,19327571	19312358,19312889,19317841,19324762,19325582,19326387,19326623,19329296	Gene ID= ENSG00000040487.12 TPM= 3.86 Transcript Type= NA
chr1	19312274	19329284	19312274	19329284	+	transcript1581.chr1.nnic@PQLC2	transcript1581.chr1.nnic	protein_coding	19312274,19317600,19324633,19325495,19326245,19326531,19327227,19328572	19312358,19317841,19324762,19325582,19326387,19326623,19327412,19329284	Gene ID= ENSG00000040487.12 TPM= 3.54 Transcript Type= NA
chr1	19312326	19329300	19312326	19329300	+	ENST00000375155.7@PQLC2	ENST00000375155.7	protein_coding	19312326,19312729,19317600,19324633,19325495,19326245,19326531,19327227,19328572	19312358,19312889,19317841,19324762,19325582,19326387,19326623,19327412,19329300	Gene ID= ENSG00000040487.12 TPM= 5.47 Transcript Type= protein_coding
chr1	19312328	19329280	19312328	19329280	+	ENST00000375153.7@PQLC2	ENST00000375153.7	protein_coding	19312328,19317600,19324633,19325495,19326245,19326531,19327227,19328572	19312889,19317841,19324762,19325582,19326387,19326623,19327412,19329280	Gene ID= ENSG00000040487.12 TPM= 10.3 Transcript Type= protein_coding
chr1	19338779	19419751	19338779	19419751	-	ENST00000375144.5@CAPZB	ENST00000375144.5	protein_coding	19419661,19385505,19378540,19357422,19356635,19345187,19344358,19338779	19419751,19385626,19378653,19357563,19356751,19345252,19344434,19339617	Gene ID= ENSG00000077549.17 TPM= 16.41 Transcript Type= protein_coding
chr1	19338823	19485485	19338823	19485485	-	ENST00000375142.5@CAPZB	ENST00000375142.5	protein_coding	19485436,19419661,19385505,19378540,19357422,19356635,19345187,19344358,19342752,19338823	19485485,19419750,19385626,19378653,19357563,19356751,19345252,19344434,19342864,19339617	Gene ID= ENSG00000077549.17 TPM= 44.4 Transcript Type= protein_coding
chr1	19461741	19464039	19461741	19464039	+	transcript1588.chr1.nnic@NA	transcript1588.chr1.nnic	NA	19461741	19464039	Gene ID= novel_gene_chr1_1589 TPM= 2.9 Transcript Type= NA
chr1	19596990	19629820	19596990	19629820	+	ENST00000322753.6@MINOS1	ENST00000322753.6	protein_coding	19596990,19622100,19623474,19626387	19597109,19622147,19623583,19629820	Gene ID= ENSG00000173436.13 TPM= 151.55 Transcript Type= protein_coding
chr1	19597039	19626629	19597039	19626629	+	ENST00000481464.5@MINOS1	ENST00000481464.5	protein_coding	19597039,19600787,19622100,19623474,19626387	19597109,19600971,19622147,19623583,19626629	Gene ID= ENSG00000173436.13 TPM= 4.83 Transcript Type= processed_transcript
chr1	19597001	19626623	19597001	19626623	+	ENST00000467029.5@MINOS1	ENST00000467029.5	protein_coding	19597001,19617258,19622100,19623474,19626387	19597109,19617336,19622147,19623583,19626623	Gene ID= ENSG00000173436.13 TPM= 16.41 Transcript Type= processed_transcript
chr1	19608114	19608568	19608114	19608568	+	ENST00000457263.1@AL031727.1	ENST00000457263.1	processed_pseudogene	19608114	19608568	Gene ID= ENSG00000226396.1 TPM= 2.9 Transcript Type= processed_pseudogene
chr1	19644163	19658452	19644163	19658452	+	ENST00000375136.7@NBL1	ENST00000375136.7	protein_coding	19644163,19655012,19655324,19656866	19644446,19655200,19655435,19658452	Gene ID= ENSG00000158747.13 TPM= 40.54 Transcript Type= protein_coding
chr1	19682598	19799939	19682598	19799939	-	transcript1616.chr1.nnic@TMCO4	transcript1616.chr1.nnic	protein_coding	19799855,19799174,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682598	19799939,19799349,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 1.93 Transcript Type= NA
chr1	19682242	19799914	19682242	19799914	-	transcript1617.chr1.nic@TMCO4	transcript1617.chr1.nic	protein_coding	19799855,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682242	19799914,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 1.93 Transcript Type= NA
chr1	19682213	19799917	19682213	19799917	-	ENST00000294543.10@TMCO4	ENST00000294543.10	protein_coding	19799855,19798137,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682213	19799917,19798215,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 1.93 Transcript Type= protein_coding
chr1	19882407	19912945	19882407	19912945	+	transcript1620.chr1.nnic@OTUD3	transcript1620.chr1.nnic	protein_coding	19882407,19890385,19897540,19904267,19904891,19906432,19907570	19882734,19890533,19897662,19904398,19904987,19906616,19912945	Gene ID= ENSG00000169914.5 TPM= 5.79 Transcript Type= NA
chr1	19975432	19979620	19975432	19979620	-	transcript1624.chr1.nic@PLA2G2A	transcript1624.chr1.nic	protein_coding	19979580,19978734,19978380,19978015,19975432	19979620,19978879,19978484,19978121,19975843	Gene ID= ENSG00000188257.10 TPM= 5.31 Transcript Type= NA
chr1	19975432	19979743	19975432	19979743	-	ENST00000400520.7@PLA2G2A	ENST00000400520.7	protein_coding	19979580,19978734,19978380,19978015,19975432	19979743,19978879,19978524,19978121,19975843	Gene ID= ENSG00000188257.10 TPM= 20.75 Transcript Type= protein_coding
chr1	20482391	20486220	20482391	20486220	-	ENST00000375078.3@CAMK2N1	ENST00000375078.3	protein_coding	20485214,20482391	20486220,20483719	Gene ID= ENSG00000162545.5 TPM= 3.86 Transcript Type= protein_coding
chr1	20499448	20508161	20499448	20508161	-	ENST00000264198.4@MUL1	ENST00000264198.4	protein_coding	20507905,20503222,20502069,20499448	20508161,20503309,20502189,20501419	Gene ID= ENSG00000090432.6 TPM= 140.94 Transcript Type= protein_coding
chr1	20552439	20555010	20552439	20555010	+	ENST00000332947.5@FAM43B	ENST00000332947.5	protein_coding	20552439	20555010	Gene ID= ENSG00000183114.7 TPM= 4.83 Transcript Type= protein_coding
chr1	20633455	20651511	20633455	20651511	+	ENST00000321556.4@PINK1	ENST00000321556.4	protein_coding	20633455,20637842,20639892,20644490,20645560,20648505,20648995,20650434	20633935,20638129,20639992,20644672,20645723,20648632,20649231,20651511	Gene ID= ENSG00000158828.7 TPM= 118.46 Transcript Type= protein_coding
chr1	20719732	20732218	20719732	20732218	-	transcript1669.chr1.nnic@SH2D5	transcript1669.chr1.nnic	protein_coding	20732004,20727958,20727523,20727001,20725920,20724396,20724083,20723626,20722756,20719732	20732218,20728086,20727603,20727075,20726066,20724635,20724251,20723734,20722915,20721995	Gene ID= ENSG00000189410.11 TPM= 7.72 Transcript Type= NA
chr1	20742682	20786660	20742682	20786660	-	transcript1677.chr1.nic@HP1BP3	transcript1677.chr1.nic	protein_coding	20786514,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742682	20786660,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 10.39 Transcript Type= NA
chr1	20742661	20786688	20742661	20786688	-	ENST00000312239.9@HP1BP3	ENST00000312239.9	protein_coding	20786649,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742661	20786688,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 12.32 Transcript Type= protein_coding
chr1	20742682	20787345	20742682	20787345	-	transcript1681.chr1.nic@HP1BP3	transcript1681.chr1.nic	protein_coding	20787195,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742682	20787345,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 21.52 Transcript Type= NA
chr1	20742682	20787336	20742682	20787336	-	transcript1693.chr1.nic@HP1BP3	transcript1693.chr1.nic	protein_coding	20787195,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742682	20787336,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 17.39 Transcript Type= NA
chr1	20754059	20786660	20754059	20786660	-	transcript1703.chr1.nnic@HP1BP3	transcript1703.chr1.nnic	protein_coding	20786514,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20754059	20786660,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20755404	Gene ID= ENSG00000127483.17 TPM= 9.01 Transcript Type= NA
chr1	20754059	20787345	20754059	20787345	-	transcript1704.chr1.nnic@HP1BP3	transcript1704.chr1.nnic	protein_coding	20787195,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20754059	20787345,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20755404	Gene ID= ENSG00000127483.17 TPM= 16.44 Transcript Type= NA
chr1	20754059	20787336	20754059	20787336	-	transcript1706.chr1.nnic@HP1BP3	transcript1706.chr1.nnic	protein_coding	20787195,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20754059	20787336,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20755404	Gene ID= ENSG00000127483.17 TPM= 5.15 Transcript Type= NA
chr1	20754060	20786660	20754060	20786660	-	transcript1707.chr1.nic@HP1BP3	transcript1707.chr1.nic	protein_coding	20786514,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20754060	20786660,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256	Gene ID= ENSG00000127483.17 TPM= 3.86 Transcript Type= NA
chr1	20773864	20776026	20773864	20776026	+	transcript1724.chr1.nnic@NA	transcript1724.chr1.nnic	NA	20773864	20776026	Gene ID= novel_gene_chr1_1725 TPM= 7.72 Transcript Type= NA
chr1	21023351	21024912	21023351	21024912	+	transcript1731.chr1.nnic@NA	transcript1731.chr1.nnic	NA	21023351	21024912	Gene ID= novel_gene_chr1_1732 TPM= 2.9 Transcript Type= NA
chr1	21217247	21345504	21217247	21345504	-	ENST00000415912.6@ECE1	ENST00000415912.6	protein_coding	21345376,21290070,21279191,21272699,21260271,21258693,21257525,21255947,21247221,21244989,21238134,21236746,21235850,21233558,21227931,21227159,21225250,21221747,21217247	21345504,21290156,21279332,21272911,21260392,21258839,21257590,21256138,21247363,21245103,21238244,21236844,21235927,21233661,21228041,21227226,21225440,21221842,21220131	Gene ID= ENSG00000117298.14 TPM= 16.41 Transcript Type= protein_coding
chr1	21509372	21578412	21509372	21578412	+	ENST00000374840.7@ALPL	ENST00000374840.7	protein_coding	21509372,21553978,21560626,21561097,21563110,21564041,21568104,21570305,21573665,21575733,21576522,21577383	21509517,21554142,21560745,21561212,21563284,21564216,21568247,21570374,21573799,21575924,21576641,21578412	Gene ID= ENSG00000162551.13 TPM= 1.93 Transcript Type= protein_coding
chr1	21678579	21783606	21678579	21783606	-	ENST00000308271.13@USP48	ENST00000308271.13	protein_coding	21782824,21757663,21756546,21752992,21752527,21751507,21748138,21747067,21736446,21729704,21728570,21723898,21721650,21721036,21715389,21706744,21706467,21706126,21705727,21704262,21703512,21701498,21695066,21689974,21687191,21680808,21678579	21783606,21757783,21756702,21753119,21752651,21751615,21748271,21747149,21736625,21729832,21728719,21724095,21721764,21721166,21715457,21706868,21706589,21706187,21705837,21704392,21703618,21701602,21695221,21690099,21687239,21680834,21679439	Gene ID= ENSG00000090686.15 TPM= 5.79 Transcript Type= protein_coding
chr1	21721036	21783124	21721036	21783124	-	transcript1747.chr1.nnic@USP48	transcript1747.chr1.nnic	protein_coding	21782824,21757663,21756546,21752992,21752527,21751507,21748138,21747067,21736446,21729704,21728566,21721036	21783124,21757783,21756702,21753119,21752651,21751615,21748271,21747149,21736625,21729832,21728719,21721166	Gene ID= ENSG00000090686.15 TPM= 2.9 Transcript Type= NA
chr1	21727851	21783606	21727851	21783606	-	ENST00000421625.6@USP48	ENST00000421625.6	protein_coding	21782824,21757663,21756546,21752992,21752527,21751507,21748138,21747067,21736446,21729704,21727851	21783606,21757783,21756702,21753119,21752651,21751615,21748271,21747149,21736625,21729832,21728719	Gene ID= ENSG00000090686.15 TPM= 5.79 Transcript Type= protein_coding
chr1	21822245	21830713	21822245	21830713	-	ENST00000486901.1@HSPG2	ENST00000486901.1	protein_coding	21829383,21828835,21828255,21828030,21827863,21824704,21824537,21824306,21824121,21823616,21822245	21830713,21829079,21828426,21828152,21827919,21824779,21824615,21824376,21824204,21823719,21823488	Gene ID= ENSG00000142798.17 TPM= 33.79 Transcript Type= retained_intron
chr1	21888475	21937323	21888475	21937323	-	transcript1761.chr1.nic@HSPG2	transcript1761.chr1.nic	protein_coding	21937155,21896175,21895922,21890585,21890427,21888475	21937323,21896310,21895966,21890694,21890485,21890141	Gene ID= ENSG00000142798.17 TPM= 1.93 Transcript Type= NA
chr1	21822245	21937297	21822245	21937297	-	ENST00000374695.7@HSPG2	ENST00000374695.7	protein_coding	21937155,21896175,21895922,21890585,21890427,21889981,21887938,21887420,21887215,21885320,21885013,21884767,21884528,21881339,21880656,21880363,21880107,21878994,21878577,21878433,21878186,21876512,21876229,21875863,21875629,21874891,21874616,21874406,21873925,21873375,21872997,21872620,21872186,21865717,21865285,21864843,21864100,21861988,21861757,21860177,21859835,21859566,21857285,21857015,21855787,21855523,21855304,21854848,21854611,21854193,21852919,21852700,21852088,21851791,21851546,21850363,21850041,21848893,21848643,21847958,21847689,21847354,21846448,21846108,21844148,21843297,21842770,21842239,21842002,21841539,21841101,21839822,21839371,21838825,21836802,21835540,21834679,21833816,21833467,21833268,21832495,21831652,21831463,21831215,21830982,21829993,21829383,21828835,21828255,21828030,21827863,21824704,21824537,21824306,21824121,21823616,21822245	21937297,21896310,21895966,21890694,21890485,21890141,21888066,21887674,21887334,21885451,21885157,21884918,21884674,21881502,21880835,21880559,21880254,21879121,21878663,21878491,21878253,21876652,21876405,21876042,21875747,21875002,21874729,21874533,21874011,21873424,21873091,21872760,21872377,21865809,21865365,21865073,21864213,21862115,21861843,21860235,21860002,21859676,21857385,21857195,21855912,21855675,21855446,21854983,21854765,21854343,21853070,21852832,21852233,21851926,21851697,21850498,21850192,21849031,21848794,21848093,21847840,21847492,21846599,21846255,21844299,21843438,21842921,21842380,21842142,21841673,21841285,21840017,21839550,21839085,21837006,21835637,21834945,21833925,21833614,21833384,21832606,21831796,21831562,21831324,21831090,21830091,21829604,21829079,21828426,21828152,21827919,21824779,21824615,21824376,21824204,21823719,21823488	Gene ID= ENSG00000142798.17 TPM= 113.91 Transcript Type= protein_coding
chr1	21860353	21861497	21860353	21861497	+	transcript1764.chr1.nnic@NA	transcript1764.chr1.nnic	NA	21860353	21861497	Gene ID= novel_gene_chr1_1765 TPM= 1.93 Transcript Type= NA
chr1	22025511	22031223	22025511	22031223	+	ENST00000416769.2@LINC00339	ENST00000416769.2	transcribed_processed_pseudogene	22025511,22030280	22025643,22031223	Gene ID= ENSG00000218510.7 TPM= 21.24 Transcript Type= processed_transcript
chr1	22052679	22092414	22052679	22092414	+	transcript1773.chr1.nic@CDC42	transcript1773.chr1.nic	protein_coding	22052679,22078429,22081722,22086439,22086669,22091428	22052742,22078583,22081794,22086548,22086866,22092414	Gene ID= ENSG00000070831.15 TPM= 17.38 Transcript Type= NA
chr1	22052627	22092923	22052627	22092923	+	ENST00000400259.5@CDC42	ENST00000400259.5	protein_coding	22052627,22078429,22081722,22086439,22086669,22091428	22052868,22078583,22081794,22086548,22086866,22092923	Gene ID= ENSG00000070831.15 TPM= 13.51 Transcript Type= protein_coding
chr1	22052668	22092946	22052668	22092946	+	ENST00000344548.7@CDC42	ENST00000344548.7	protein_coding	22052668,22074094,22078429,22081722,22086439,22086669,22091428	22052742,22074219,22078583,22081794,22086548,22086866,22092946	Gene ID= ENSG00000070831.15 TPM= 16.41 Transcript Type= protein_coding
chr1	22052689	22090804	22052689	22090804	+	ENST00000315554.12@CDC42	ENST00000315554.12	protein_coding	22052689,22078429,22081722,22086439,22086669,22089943	22052742,22078583,22081794,22086548,22086866,22090804	Gene ID= ENSG00000070831.15 TPM= 2.9 Transcript Type= protein_coding
chr1	22636506	22639608	22636506	22639608	+	ENST00000374642.7@C1QA	ENST00000374642.7	protein_coding	22636506,22637610,22638833	22636702,22637779,22639608	Gene ID= ENSG00000173372.16 TPM= 15.44 Transcript Type= protein_coding
chr1	22643633	22648110	22643633	22648110	+	ENST00000374639.7@C1QC	ENST00000374639.7	protein_coding	22643633,22644011,22647227	22643737,22644204,22648110	Gene ID= ENSG00000159189.11 TPM= 7.72 Transcript Type= protein_coding
chr1	22643630	22648110	22643630	22648110	+	ENST00000374640.8@C1QC	ENST00000374640.8	protein_coding	22643630,22644011,22647227	22643714,22644204,22648110	Gene ID= ENSG00000159189.11 TPM= 27.99 Transcript Type= protein_coding
chr1	22652981	22661538	22652981	22661538	+	ENST00000509305.5@C1QB	ENST00000509305.5	protein_coding	22652981,22659440,22660812	22653303,22659643,22661538	Gene ID= ENSG00000173369.15 TPM= 17.86 Transcript Type= protein_coding
chr1	22653189	22661536	22653189	22661536	+	ENST00000314933.6@C1QB	ENST00000314933.6	protein_coding	22653189,22659440,22660812	22653303,22659643,22661536	Gene ID= ENSG00000173369.15 TPM= 14 Transcript Type= protein_coding
chr1	23019460	23083688	23019460	23083688	+	transcript1796.chr1.nnic@KDM1A	transcript1796.chr1.nnic	protein_coding	23019460,23030469,23044427,23050387,23053761,23055069,23055932,23057484,23059073,23066060,23068539,23069061,23071225,23072124,23073292,23077228,23081446,23082220,23083179	23019947,23030634,23044486,23050520,23053839,23055161,23056038,23057565,23059167,23066071,23068681,23069151,23071359,23072197,23073403,23077360,23081573,23082366,23083688	Gene ID= ENSG00000004487.15 TPM= 21.48 Transcript Type= NA
chr1	23019465	23083688	23019465	23083688	+	transcript1809.chr1.nnic@KDM1A	transcript1809.chr1.nnic	protein_coding	23019465,23030469,23050387,23053761,23055069,23055932,23057484,23059073,23068539,23069061,23071225,23072124,23073292,23077228,23081446,23082220,23083179	23019947,23030634,23050520,23053839,23055161,23056038,23057565,23059167,23068681,23069151,23071359,23072197,23073403,23077360,23081573,23082366,23083688	Gene ID= ENSG00000004487.15 TPM= 11.83 Transcript Type= NA
chr1	23019493	23083688	23019493	23083688	+	ENST00000400181.8@KDM1A	ENST00000400181.8	protein_coding	23019493,23030469,23044427,23050387,23053761,23055069,23055932,23057484,23059073,23066060,23068539,23069061,23071225,23072124,23073292,23077228,23078990,23079553,23081446,23082220,23083179	23019947,23030634,23044486,23050520,23053839,23055161,23056038,23057565,23059167,23066071,23068681,23069151,23071359,23072197,23073403,23077360,23079177,23079667,23081573,23082366,23083688	Gene ID= ENSG00000004487.15 TPM= 131.52 Transcript Type= protein_coding
chr1	23019448	23083689	23019448	23083689	+	ENST00000356634.7@KDM1A	ENST00000356634.7	protein_coding	23019448,23030469,23050387,23053761,23055069,23055932,23057484,23059073,23068539,23069061,23071225,23072124,23073292,23077228,23078990,23079553,23081446,23082220,23083179	23019947,23030634,23050520,23053839,23055161,23056038,23057565,23059167,23068681,23069151,23071359,23072197,23073403,23077360,23079177,23079667,23081573,23082366,23083689	Gene ID= ENSG00000004487.15 TPM= 87.12 Transcript Type= protein_coding
chr1	23084955	23088909	23084955	23088909	-	transcript1813.chr1.nnic@NA	transcript1813.chr1.nnic	NA	23084955	23088909	Gene ID= novel_gene_chr1_1814 TPM= 4.83 Transcript Type= NA
chr1	23093654	23168844	23093654	23168844	-	transcript1816.chr1.nic@LUZP1	transcript1816.chr1.nic	protein_coding	23168766,23109022,23093654	23168844,23109127,23094380	Gene ID= ENSG00000169641.13 TPM= 2.9 Transcript Type= NA
chr1	23093443	23168845	23093443	23168845	-	ENST00000471849.5@LUZP1	ENST00000471849.5	protein_coding	23168766,23109585,23109022,23093443	23168845,23109650,23109127,23094380	Gene ID= ENSG00000169641.13 TPM= 1.93 Transcript Type= protein_coding
chr1	23309788	23344336	23309788	23344336	-	transcript1825.chr1.nic@HNRNPR	transcript1825.chr1.nic	protein_coding	23344211,23340852,23338490,23337754,23323556,23321528,23318483,23313553,23311201,23309788	23344336,23341017,23338608,23337861,23323732,23321663,23318688,23313702,23311322,23311066	Gene ID= ENSG00000125944.19 TPM= 4.83 Transcript Type= NA
chr1	23309786	23344322	23309786	23344322	-	ENST00000374612.5@HNRNPR	ENST00000374612.5	protein_coding	23344211,23340852,23338490,23337754,23333518,23323556,23321528,23318483,23313553,23311201,23309786	23344322,23341020,23338608,23337861,23333631,23323732,23321663,23318688,23313702,23311322,23311066	Gene ID= ENSG00000125944.19 TPM= 41.99 Transcript Type= protein_coding
chr1	23309788	23344262	23309788	23344262	-	ENST00000302271.10@HNRNPR	ENST00000302271.10	protein_coding	23344211,23340852,23338490,23337754,23333518,23323556,23321528,23318483,23313553,23311201,23309788	23344262,23341017,23338608,23337861,23333631,23323732,23321663,23318688,23313702,23311322,23311066	Gene ID= ENSG00000125944.19 TPM= 5.31 Transcript Type= protein_coding
chr1	23359975	23368386	23359975	23368386	-	ENST00000374608.3@ZNF436	ENST00000374608.3	protein_coding	23367973,23367042,23359975	23368386,23367168,23363221	Gene ID= ENSG00000125945.14 TPM= 3.86 Transcript Type= protein_coding
chr1	23378379	23380085	23378379	23380085	-	transcript1881.chr1.nnic@NA	transcript1881.chr1.nnic	NA	23378379	23380085	Gene ID= novel_gene_chr1_1882 TPM= 3.86 Transcript Type= NA
chr1	23379951	23424779	23379951	23424779	-	transcript1856.chr1.nnic@TCEA3	transcript1856.chr1.nnic	protein_coding	23424565,23419077,23417904,23417249,23408664,23397792,23397545,23393879,23387273,23384346,23379951	23424779,23419207,23418009,23417390,23408726,23397955,23397601,23394033,23387419,23384417,23381474	Gene ID= ENSG00000204219.9 TPM= 16.89 Transcript Type= NA
chr1	23381061	23424740	23381061	23424740	-	ENST00000450454.6@TCEA3	ENST00000450454.6	protein_coding	23424565,23419077,23417904,23417249,23408664,23397792,23397545,23393879,23387273,23384346,23381061	23424740,23419139,23418009,23417390,23408726,23397955,23397601,23394033,23387419,23384417,23381474	Gene ID= ENSG00000204219.9 TPM= 114.87 Transcript Type= protein_coding
chr1	23424873	23430050	23424873	23430050	+	transcript1894.chr1.nnic@NA	transcript1894.chr1.nnic	NA	23424873,23426178,23427712,23428961	23425161,23426260,23427881,23430050	Gene ID= novel_gene_chr1_1895 TPM= 1.93 Transcript Type= NA
chr1	23428563	23484265	23428563	23484265	-	transcript1883.chr1.nic@ASAP3	transcript1883.chr1.nic	protein_coding	23484005,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433362,23433077,23431696,23431035,23428563	23484265,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930	Gene ID= ENSG00000088280.18 TPM= 12.95 Transcript Type= NA
chr1	23428563	23484223	23428563	23484223	-	transcript1887.chr1.nic@ASAP3	transcript1887.chr1.nic	protein_coding	23484036,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433425,23433077,23431696,23431035,23428563	23484223,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930	Gene ID= ENSG00000088280.18 TPM= 21.8 Transcript Type= NA
chr1	23428563	23432566	23428563	23432566	-	transcript1896.chr1.nnic@ASAP3	transcript1896.chr1.nnic	protein_coding	23432238,23431696,23431035,23428563	23432566,23431918,23431125,23429930	Gene ID= ENSG00000088280.18 TPM= 14 Transcript Type= NA
chr1	23428563	23484178	23428563	23484178	-	ENST00000336689.7@ASAP3	ENST00000336689.7	protein_coding	23484005,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433425,23433077,23431696,23431035,23428563	23484178,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930	Gene ID= ENSG00000088280.18 TPM= 122.52 Transcript Type= protein_coding
chr1	23429548	23432826	23429548	23432826	+	transcript1897.chr1.nnic@NA	transcript1897.chr1.nnic	NA	23429548	23432826	Gene ID= novel_gene_chr1_1898 TPM= 2.9 Transcript Type= NA
chr1	23557918	23559794	23557918	23559794	-	ENST00000374561.5@ID3	ENST00000374561.5	protein_coding	23559127,23558935,23557918	23559794,23559019,23558415	Gene ID= ENSG00000117318.8 TPM= 32.34 Transcript Type= protein_coding
chr1	23557923	23559501	23557923	23559501	-	transcript1901.chr1.nnic@NA	transcript1901.chr1.nnic	NA	23557923	23559501	Gene ID= novel_gene_chr1_1902 TPM= 4.34 Transcript Type= NA
chr1	23691779	23696425	23691779	23696425	+	ENST00000374550.7@RPL11	ENST00000374550.7	protein_coding	23691779,23692609,23693807,23694660,23695798,23696344	23691829,23692759,23693913,23694791,23695908,23696425	Gene ID= ENSG00000142676.12 TPM= 356.85 Transcript Type= protein_coding
chr1	23692306	23696418	23692306	23696418	+	ENST00000482370.1@RPL11	ENST00000482370.1	protein_coding	23692306,23693807,23694660,23695798,23696344	23692759,23693913,23694791,23695908,23696418	Gene ID= ENSG00000142676.12 TPM= 76.91 Transcript Type= processed_transcript
chr1	23697175	23699511	23697175	23699511	-	transcript1910.chr1.nnic@NA	transcript1910.chr1.nnic	NA	23697175	23699511	Gene ID= novel_gene_chr1_1911 TPM= 4.83 Transcript Type= NA
chr1	23743155	23762059	23743155	23762059	+	ENST00000418390.6@ELOA	ENST00000418390.6	protein_coding	23743155,23749021,23749842,23750845,23752407,23754100,23754363,23755843,23756274,23756953,23759512	23743578,23749077,23749948,23752030,23752518,23754255,23754460,23756023,23756385,23757125,23762059	Gene ID= ENSG00000011007.12 TPM= 31.37 Transcript Type= protein_coding
chr1	23743472	23759893	23743472	23759893	+	ENST00000609199.1@ELOA	ENST00000609199.1	protein_coding	23743472,23749021,23749842,23750845,23752407,23754100,23754363,23755843,23756274,23756953,23759512	23743578,23749077,23749948,23752030,23752518,23754255,23754460,23756023,23756385,23757125,23759893	Gene ID= ENSG00000011007.12 TPM= 25.58 Transcript Type= protein_coding
chr1	23778405	23788232	23778405	23788232	+	ENST00000246151.8@PITHD1	ENST00000246151.8	protein_coding	23778405,23779438,23779864,23785675,23786315,23787275	23778713,23779481,23779941,23785779,23786423,23788232	Gene ID= ENSG00000057757.9 TPM= 92.67 Transcript Type= protein_coding
chr1	23790970	23795539	23790970	23795539	+	ENST00000374514.7@LYPLA2	ENST00000374514.7	protein_coding	23790970,23792657,23793008,23793151,23793705,23793860,23794063,23794224,23794427,23794682	23791250,23792760,23793039,23793216,23793752,23793930,23794136,23794325,23794600,23795539	Gene ID= ENSG00000011009.10 TPM= 66.29 Transcript Type= protein_coding
chr1	23791166	23795539	23791166	23795539	+	transcript1930.chr1.nnic@LYPLA2	transcript1930.chr1.nnic	protein_coding	23791166,23792552,23793008,23793151,23793705,23793860,23794063,23794224,23794427,23794682	23791250,23792760,23793039,23793216,23793752,23793930,23794136,23794325,23794600,23795539	Gene ID= ENSG00000011009.10 TPM= 7.4 Transcript Type= NA
chr1	23791145	23795539	23791145	23795539	+	transcript1932.chr1.nic@LYPLA2	transcript1932.chr1.nic	protein_coding	23791145,23792657,23793151,23793705,23793860,23794063,23794224,23794427,23794682	23791250,23792760,23793216,23793752,23793930,23794136,23794325,23794600,23795539	Gene ID= ENSG00000011009.10 TPM= 13.2 Transcript Type= NA
chr1	23791145	23795539	23791145	23795539	+	transcript1933.chr1.nic@LYPLA2	transcript1933.chr1.nic	protein_coding	23791145,23792657,23793151,23793705,23793860,23794063,23794224,23794552,23794682	23791250,23792760,23793216,23793752,23793930,23794136,23794325,23794600,23795539	Gene ID= ENSG00000011009.10 TPM= 4.83 Transcript Type= NA
chr1	23795599	23800804	23795599	23800804	-	ENST00000617979.4@GALE	ENST00000617979.4	protein_coding	23800712,23799366,23798887,23798615,23798117,23797695,23797034,23796876,23796697,23796509,23796151,23795599	23800804,23799436,23799012,23798730,23798230,23797871,23797147,23796942,23796782,23796586,23796265,23796007	Gene ID= ENSG00000117308.14 TPM= 4.83 Transcript Type= protein_coding
chr1	23795599	23800755	23795599	23800755	-	transcript1936.chr1.nic@GALE	transcript1936.chr1.nic	protein_coding	23800712,23799366,23798615,23798117,23797695,23797034,23796876,23796697,23796509,23796151,23795599	23800755,23799436,23798730,23798230,23797871,23797147,23796942,23796782,23796586,23796265,23796007	Gene ID= ENSG00000117308.14 TPM= 2.9 Transcript Type= NA
chr1	23795599	23800755	23795599	23800755	-	transcript1937.chr1.nic@GALE	transcript1937.chr1.nic	protein_coding	23800712,23799366,23798615,23798117,23797695,23797034,23796876,23796697,23796151,23795599	23800755,23799436,23798730,23798230,23797871,23797147,23796942,23796782,23796265,23796007	Gene ID= ENSG00000117308.14 TPM= 1.93 Transcript Type= NA
chr1	23801885	23825459	23801885	23825459	-	ENST00000374490.7@HMGCL	ENST00000374490.7	protein_coding	23825356,23820510,23817476,23816675,23814190,23810736,23808135,23804400,23801885	23825459,23820593,23817583,23816770,23814338,23810799,23808323,23804525,23802564	Gene ID= ENSG00000117305.14 TPM= 42.79 Transcript Type= protein_coding
chr1	23801885	23825443	23801885	23825443	-	transcript1941.chr1.nnic@HMGCL	transcript1941.chr1.nnic	protein_coding	23825356,23820510,23816675,23814190,23810736,23808135,23804400,23801885	23825443,23820593,23816770,23814338,23810799,23808323,23804525,23802564	Gene ID= ENSG00000117305.14 TPM= 3.21 Transcript Type= NA
chr1	23801885	23825443	23801885	23825443	-	transcript1947.chr1.nnic@HMGCL	transcript1947.chr1.nnic	protein_coding	23825356,23820510,23816675,23808135,23804400,23801885	23825443,23820593,23816770,23808323,23804525,23802564	Gene ID= ENSG00000117305.14 TPM= 3.7 Transcript Type= NA
chr1	23801887	23825428	23801887	23825428	-	ENST00000436439.6@HMGCL	ENST00000436439.6	protein_coding	23825356,23820510,23817476,23816675,23808135,23804400,23801887	23825428,23820593,23817583,23816770,23808323,23804525,23802564	Gene ID= ENSG00000117305.14 TPM= 40.06 Transcript Type= protein_coding
chr1	23845077	23868294	23845077	23868294	-	ENST00000374479.3@FUCA1	ENST00000374479.3	protein_coding	23867898,23865491,23863134,23859798,23854360,23848649,23846074,23845077	23868294,23865625,23863271,23859903,23854560,23848839,23846173,23845855	Gene ID= ENSG00000179163.11 TPM= 20.27 Transcript Type= protein_coding
chr1	23966445	23980927	23966445	23980927	-	ENST00000341154.10@SRSF10	ENST00000341154.10	protein_coding	23980191,23978653,23977911,23974974,23971850,23971573,23966445	23980927,23978817,23978273,23975051,23972012,23971626,23967723	Gene ID= ENSG00000188529.14 TPM= 1.93 Transcript Type= processed_transcript
chr1	23978579	23980327	23978579	23980327	-	transcript1977.chr1.nic@SRSF10	transcript1977.chr1.nic	protein_coding	23980191,23978579	23980327,23978817	Gene ID= ENSG00000188529.14 TPM= 1.93 Transcript Type= NA
chr1	23966445	23980296	23966445	23980296	-	ENST00000453840.7@SRSF10	ENST00000453840.7	protein_coding	23980191,23978713,23974974,23971850,23971573,23966445	23980296,23978817,23975077,23972012,23971623,23967723	Gene ID= ENSG00000188529.14 TPM= 8.69 Transcript Type= protein_coding
chr1	23970364	23980319	23970364	23980319	-	ENST00000492112.2@SRSF10	ENST00000492112.2	protein_coding	23980191,23978713,23974974,23971850,23971573,23970364	23980319,23978817,23975077,23972012,23971626,23971439	Gene ID= ENSG00000188529.14 TPM= 25.1 Transcript Type= protein_coding
chr1	24051892	24052750	24051892	24052750	-	transcript1990.chr1.nnic@NA	transcript1990.chr1.nnic	NA	24051892	24052750	Gene ID= novel_gene_chr1_1991 TPM= 5.79 Transcript Type= NA
chr1	24056037	24072378	24056037	24072378	-	transcript1987.chr1.nnic@MYOM3	transcript1987.chr1.nnic	protein_coding	24072303,24071969,24071117,24068223,24067970,24067021,24065891,24064072,24063492,24063126,24061946,24061273,24061060,24058924,24056037	24072378,24072013,24071253,24068367,24068029,24067088,24066001,24064159,24063530,24063234,24062109,24061309,24061082,24058979,24057627	Gene ID= ENSG00000142661.18 TPM= 36.2 Transcript Type= NA
chr1	24056037	24112175	24056037	24112175	-	ENST00000374434.3@MYOM3	ENST00000374434.3	protein_coding	24112031,24108476,24107993,24107073,24105920,24099680,24097923,24095442,24094853,24092947,24092174,24090797,24090065,24089538,24086644,24084468,24082593,24082001,24081330,24080016,24076159,24075319,24074160,24071969,24071117,24068223,24067970,24067021,24065891,24064072,24063492,24063126,24061946,24061273,24061060,24058924,24056037	24112175,24108654,24108073,24107232,24106077,24099775,24098011,24095486,24094990,24093108,24092315,24090996,24090118,24089665,24086827,24084639,24082714,24082188,24081456,24080194,24076273,24075475,24074269,24072013,24071253,24068367,24068029,24067088,24066001,24064159,24063530,24063234,24062109,24061309,24061082,24058979,24057627	Gene ID= ENSG00000142661.18 TPM= 316.14 Transcript Type= protein_coding
chr1	24154157	24187288	24154157	24187288	-	transcript1993.chr1.nnic@IFNLR1	transcript1993.chr1.nnic	protein_coding	24187191,24169417,24161542,24159474,24159052,24154157	24187288,24169601,24161684,24159633,24159182,24157891	Gene ID= ENSG00000185436.11 TPM= 1.93 Transcript Type= NA
chr1	24154157	24187261	24154157	24187261	-	ENST00000327535.5@IFNLR1	ENST00000327535.5	protein_coding	24187191,24180731,24169417,24161542,24159474,24159052,24154157	24187261,24180854,24169601,24161684,24159633,24159182,24157891	Gene ID= ENSG00000185436.11 TPM= 9.65 Transcript Type= protein_coding
chr1	24643012	24673267	24643012	24673267	+	ENST00000323848.13@SRRM1	ENST00000323848.13	protein_coding	24643012,24645984,24646667,24648859,24649971,24651409,24652434,24652913,24654855,24660719,24661310,24662660,24666815,24669123,24670120,24671386,24672182	24643347,24646073,24646789,24649029,24650086,24651612,24652628,24653032,24655129,24660799,24661396,24662804,24666925,24669587,24670315,24671595,24673267	Gene ID= ENSG00000133226.16 TPM= 10.62 Transcript Type= protein_coding
chr1	24643205	24650032	24643205	24650032	+	transcript2010.chr1.nic@SRRM1	transcript2010.chr1.nic	protein_coding	24643205,24645984,24646667,24647079,24649971	24643347,24646073,24646789,24649029,24650032	Gene ID= ENSG00000133226.16 TPM= 6.76 Transcript Type= NA
chr1	24643559	24669508	24643559	24669508	+	ENST00000596378.1@SRRM1	ENST00000596378.1	protein_coding	24643559,24645984,24646667,24648859,24649971,24651409,24652434,24652913,24654855,24660719,24661310,24662660,24663183,24666815,24669123	24643732,24646073,24646789,24649029,24650086,24651612,24652628,24653032,24655123,24660799,24661396,24662804,24663224,24666925,24669508	Gene ID= ENSG00000133226.16 TPM= 2.9 Transcript Type= protein_coding
chr1	24745357	24844324	24745357	24844324	+	ENST00000374379.8@CLIC4	ENST00000374379.8	protein_coding	24745357,24797742,24814094,24827010,24839860,24840773	24745625,24797851,24814219,24827116,24840041,24844324	Gene ID= ENSG00000169504.14 TPM= 14.48 Transcript Type= protein_coding
chr1	25229015	25232564	25229015	25232564	-	transcript2023.chr1.nic@SYF2	transcript2023.chr1.nic	protein_coding	25232444,25232104,25229015	25232564,25232211,25229123	Gene ID= ENSG00000117614.9 TPM= 15.44 Transcript Type= NA
chr1	25222679	25232493	25222679	25232493	-	ENST00000236273.8@SYF2	ENST00000236273.8	protein_coding	25232444,25232104,25228998,25228118,25227442,25225002,25222679	25232493,25232211,25229123,25228235,25227532,25225100,25223431	Gene ID= ENSG00000117614.9 TPM= 27.03 Transcript Type= protein_coding
chr1	25242249	25247454	25242249	25247454	-	ENST00000498238.1@RSRP1	ENST00000498238.1	protein_coding	25247309,25246444,25243550,25242249	25247454,25247029,25245301,25242705	Gene ID= ENSG00000117616.17 TPM= 4.83 Transcript Type= retained_intron
chr1	25247136	25248331	25247136	25248331	+	transcript2029.chr1.nnic@NA	transcript2029.chr1.nnic	NA	25247136	25248331	Gene ID= novel_gene_chr1_2030 TPM= 2.9 Transcript Type= NA
chr1	25337917	25362361	25337917	25362361	+	ENST00000374358.4@TMEM50A	ENST00000374358.4	protein_coding	25337917,25340474,25342961,25351626,25352882,25356793,25360660	25338456,25340579,25343073,25351693,25352974,25356853,25362361	Gene ID= ENSG00000183726.10 TPM= 25.1 Transcript Type= protein_coding
chr1	25338447	25360967	25338447	25360967	+	transcript2035.chr1.nic@TMEM50A	transcript2035.chr1.nic	protein_coding	25338447,25340474,25342961,25351626,25352882,25356793,25360660	25338817,25340579,25343073,25351693,25352974,25356853,25360967	Gene ID= ENSG00000183726.10 TPM= 2.9 Transcript Type= NA
chr1	25338317	25360967	25338317	25360967	+	ENST00000498135.5@TMEM50A	ENST00000498135.5	protein_coding	25338317,25340474,25351626,25352882,25356793,25360660	25338456,25340579,25351693,25352974,25356853,25360967	Gene ID= ENSG00000183726.10 TPM= 1.93 Transcript Type= processed_transcript
chr1	25430836	25485724	25430836	25485724	+	transcript2042.chr1.nic@TMEM57	transcript2042.chr1.nic	protein_coding	25430836,25446762,25448808,25454259,25456653,25458391,25484116,25485613	25431178,25446903,25448934,25454382,25456831,25458892,25484274,25485724	Gene ID= ENSG00000204178.9 TPM= 6.76 Transcript Type= NA
chr1	25430969	25458488	25430969	25458488	+	transcript2046.chr1.nic@TMEM57	transcript2046.chr1.nic	protein_coding	25430969,25446762,25448808,25454259,25458391	25431178,25446903,25448934,25456831,25458488	Gene ID= ENSG00000204178.9 TPM= 1.93 Transcript Type= NA
chr1	25543580	25568886	25543580	25568886	+	ENST00000374338.4@LDLRAP1	ENST00000374338.4	protein_coding	25543580,25553922,25554860,25557153,25562644,25563070,25563661,25565173,25566848	25543786,25554064,25554972,25557267,25562716,25563153,25563791,25565207,25568886	Gene ID= ENSG00000157978.11 TPM= 39.58 Transcript Type= protein_coding
chr1	25800201	25801698	25800201	25801698	+	transcript2058.chr1.nic@SELENON	transcript2058.chr1.nic	protein_coding	25800201,25801043	25800413,25801698	Gene ID= ENSG00000162430.16 TPM= 2.9 Transcript Type= NA
chr1	25800193	25818221	25800193	25818221	+	ENST00000374315.1@SELENON	ENST00000374315.1	protein_coding	25800193,25801043,25805142,25808580,25809026,25809683,25811454,25811691,25812687,25813881,25814077,25815548	25800413,25801160,25805275,25808789,25809150,25809820,25811535,25811879,25812792,25813993,25814178,25818221	Gene ID= ENSG00000162430.16 TPM= 38.13 Transcript Type= protein_coding
chr1	25800176	25818224	25800176	25818224	+	ENST00000361547.6@SELENON	ENST00000361547.6	protein_coding	25800176,25801043,25802016,25805142,25808580,25809026,25809683,25811454,25811691,25812687,25813881,25814077,25815548	25800413,25801160,25802117,25805275,25808789,25809150,25809820,25811535,25811879,25812792,25813993,25814178,25818224	Gene ID= ENSG00000162430.16 TPM= 37.16 Transcript Type= protein_coding
chr1	25819906	25832941	25819906	25832941	+	ENST00000374303.6@MTFR1L	ENST00000374303.6	protein_coding	25819906,25823019,25823644,25826302,25826615,25829509,25831921	25820029,25823128,25823748,25826411,25826826,25829830,25832941	Gene ID= ENSG00000117640.17 TPM= 113.76 Transcript Type= protein_coding
chr1	25819929	25832942	25819929	25832942	+	ENST00000474295.5@MTFR1L	ENST00000474295.5	protein_coding	25819929,25823019,25823644,25826302,25826615,25829618,25831921	25820029,25823128,25823748,25826411,25826826,25829830,25832942	Gene ID= ENSG00000117640.17 TPM= 24.71 Transcript Type= protein_coding
chr1	25820003	25832938	25820003	25832938	+	ENST00000374307.9@MTFR1L	ENST00000374307.9	protein_coding	25820003,25823019,25823644,25826302,25826615,25829545,25831921	25820029,25823128,25823748,25826411,25826826,25829830,25832938	Gene ID= ENSG00000117640.17 TPM= 10.47 Transcript Type= protein_coding
chr1	25861499	25875675	25861499	25875675	-	transcript2081.chr1.nnic@PAQR7	transcript2081.chr1.nnic	protein_coding	25875488,25870609,25861499	25875675,25870694,25863861	Gene ID= ENSG00000182749.5 TPM= 1.93 Transcript Type= NA
chr1	25873888	25875755	25873888	25875755	-	transcript2082.chr1.nnic@NA	transcript2082.chr1.nnic	NA	25873888	25875755	Gene ID= novel_gene_chr1_2083 TPM= 1.93 Transcript Type= NA
chr1	26019497	26022180	26019497	26022180	-	transcript2097.chr1.nnic@NA	transcript2097.chr1.nnic	NA	26019497	26022180	Gene ID= novel_gene_chr1_2098 TPM= 1.93 Transcript Type= NA
chr1	26021780	26036464	26021780	26036464	+	ENST00000374280.3@EXTL1	ENST00000374280.3	protein_coding	26021780,26029193,26029600,26030476,26031132,26031460,26032396,26033229,26033696,26034836,26035165	26023425,26029286,26029707,26030595,26031264,26031566,26032485,26033315,26033856,26035004,26036464	Gene ID= ENSG00000158008.9 TPM= 5.31 Transcript Type= protein_coding
chr1	26023038	26036464	26023038	26036464	+	transcript2092.chr1.nic@EXTL1	transcript2092.chr1.nic	protein_coding	26023038,26029193,26030476,26031132,26031460,26032396,26033229,26033696,26034836,26035165	26023425,26029286,26030595,26031264,26031566,26032485,26033315,26033856,26035004,26036464	Gene ID= ENSG00000158008.9 TPM= 2.41 Transcript Type= NA
chr1	26025014	26036615	26025014	26036615	-	transcript2095.chr1.nnic@NA	transcript2095.chr1.nnic	NA	26036397,26025014	26036615,26025187	Gene ID= novel_gene_chr1_2096 TPM= 2.9 Transcript Type= NA
chr1	26048977	26050945	26048977	26050945	-	transcript2159.chr1.nnic@NA	transcript2159.chr1.nnic	NA	26048977	26050945	Gene ID= novel_gene_chr1_2160 TPM= 2.9 Transcript Type= NA
chr1	26051304	26067633	26051304	26067633	-	ENST00000374272.3@TRIM63	ENST00000374272.3	protein_coding	26067336,26066268,26061166,26060266,26058390,26057628,26057203,26053893,26051304	26067633,26066440,26061334,26060361,26058623,26057650,26057327,26053964,26051883	Gene ID= ENSG00000158022.6 TPM= 835.26 Transcript Type= protein_coding
chr1	26052475	26054763	26052475	26054763	-	transcript2157.chr1.nnic@NA	transcript2157.chr1.nnic	NA	26052475	26054763	Gene ID= novel_gene_chr1_2158 TPM= 6.76 Transcript Type= NA
chr1	26053710	26054984	26053710	26054984	+	transcript2155.chr1.nnic@NA	transcript2155.chr1.nnic	NA	26053710	26054984	Gene ID= novel_gene_chr1_2156 TPM= 8.69 Transcript Type= NA
chr1	26055513	26057535	26055513	26057535	-	transcript2161.chr1.nnic@NA	transcript2161.chr1.nnic	NA	26055513	26057535	Gene ID= novel_gene_chr1_2162 TPM= 6.76 Transcript Type= NA
chr1	26111164	26125543	26111164	26125543	+	transcript2168.chr1.nnic@PDIK1L	transcript2168.chr1.nnic	protein_coding	26111164,26121837	26111420,26125543	Gene ID= ENSG00000175087.9 TPM= 1.93 Transcript Type= NA
chr1	26159054	26163960	26159054	26163960	+	transcript2169.chr1.nnic@FAM110D	transcript2169.chr1.nnic	protein_coding	26159054,26161212,26163648	26159126,26163321,26163960	Gene ID= ENSG00000197245.5 TPM= 2.41 Transcript Type= NA
chr1	26159020	26163962	26159020	26163962	+	ENST00000374268.4@FAM110D	ENST00000374268.4	protein_coding	26159020,26161212	26159126,26163962	Gene ID= ENSG00000197245.5 TPM= 7.24 Transcript Type= protein_coding
chr1	26169871	26170873	26169871	26170873	+	ENST00000374266.6@ZNF593	ENST00000374266.6	protein_coding	26169871,26170418,26170575	26170183,26170480,26170873	Gene ID= ENSG00000142684.8 TPM= 118.73 Transcript Type= protein_coding
chr1	26169942	26170873	26169942	26170873	+	ENST00000270812.6@ZNF593	ENST00000270812.6	protein_coding	26169942,26170418	26170183,26170873	Gene ID= ENSG00000142684.8 TPM= 2.9 Transcript Type= protein_coding
chr1	26182019	26189884	26182019	26189884	+	transcript2173.chr1.nic@CNKSR1	transcript2173.chr1.nic	protein_coding	26182019,26182361,26182480,26183197,26183346,26183729,26184071,26184214,26184401,26184585,26185014,26187168,26187411,26188234,26188442,26188598,26188772,26189279	26182082,26182402,26182584,26183256,26183414,26183830,26184141,26184287,26184507,26184612,26185186,26187241,26187482,26188307,26188503,26188697,26188953,26189884	Gene ID= ENSG00000142675.17 TPM= 62.26 Transcript Type= NA
chr1	26182019	26189884	26182019	26189884	+	transcript2176.chr1.nnic@CNKSR1	transcript2176.chr1.nnic	protein_coding	26182019,26182361,26182480,26183197,26183346,26183729,26184071,26184214,26184401,26184585,26185014,26187411,26188234,26188442,26188598,26188772,26189279	26182082,26182402,26182584,26183256,26183414,26183830,26184141,26184287,26184507,26184612,26185186,26187482,26188307,26188503,26188697,26188953,26189884	Gene ID= ENSG00000142675.17 TPM= 9.26 Transcript Type= NA
chr1	26182019	26189884	26182019	26189884	+	transcript2178.chr1.nic@CNKSR1	transcript2178.chr1.nic	protein_coding	26182019,26182361,26182480,26183197,26183346,26183729,26184214,26184401,26184585,26185014,26187168,26187411,26188234,26188442,26188598,26188772,26189279	26182082,26182402,26182584,26183256,26183414,26183830,26184287,26184507,26184612,26185186,26187241,26187482,26188307,26188503,26188697,26188953,26189884	Gene ID= ENSG00000142675.17 TPM= 9.5 Transcript Type= NA
chr1	26185393	26189884	26185393	26189884	+	transcript2190.chr1.nic@CNKSR1	transcript2190.chr1.nic	protein_coding	26185393,26188442,26188598,26189279	26188307,26188503,26188953,26189884	Gene ID= ENSG00000142675.17 TPM= 6.11 Transcript Type= NA
chr1	26187621	26189878	26187621	26189878	+	transcript2199.chr1.nic@CNKSR1	transcript2199.chr1.nic	protein_coding	26187621,26188772	26188697,26189878	Gene ID= ENSG00000142675.17 TPM= 3.97 Transcript Type= NA
chr1	26234180	26278807	26234180	26278807	+	transcript2205.chr1.nnic@CEP85	transcript2205.chr1.nnic	protein_coding	26234180,26237711,26239762,26244166,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277136	26234310,26237888,26239838,26244318,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278807	Gene ID= ENSG00000130695.14 TPM= 2.65 Transcript Type= NA
chr1	26234168	26278807	26234168	26278807	+	transcript2209.chr1.nic@CEP85	transcript2209.chr1.nic	protein_coding	26234168,26239762,26244166,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277136	26234310,26239838,26244318,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278807	Gene ID= ENSG00000130695.14 TPM= 13.76 Transcript Type= NA
chr1	26254593	26278808	26254593	26278808	+	transcript2212.chr1.nic@CEP85	transcript2212.chr1.nic	protein_coding	26254593,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277133	26254832,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278808	Gene ID= ENSG00000130695.14 TPM= 4.34 Transcript Type= NA
chr1	26254595	26278807	26254595	26278807	+	transcript2215.chr1.nic@CEP85	transcript2215.chr1.nic	protein_coding	26254595,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277136	26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278807	Gene ID= ENSG00000130695.14 TPM= 2.65 Transcript Type= NA
chr1	26254597	26260515	26254597	26260515	+	transcript2226.chr1.nnic@CEP85	transcript2226.chr1.nnic	protein_coding	26254597,26254927,26257597,26258143,26259617	26254832,26255865,26257730,26258260,26260515	Gene ID= ENSG00000130695.14 TPM= 1.93 Transcript Type= NA
chr1	26234202	26278808	26234202	26278808	+	ENST00000252992.8@CEP85	ENST00000252992.8	protein_coding	26234202,26239762,26244166,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277133	26234310,26239838,26244318,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278808	Gene ID= ENSG00000130695.14 TPM= 29.92 Transcript Type= protein_coding
chr1	26265684	26266792	26265684	26266792	+	transcript2231.chr1.nnic@NA	transcript2231.chr1.nnic	NA	26265684	26266792	Gene ID= novel_gene_chr1_2232 TPM= 1.93 Transcript Type= NA
chr1	26279176	26281522	26279176	26281522	+	ENST00000270792.9@SH3BGRL3	ENST00000270792.9	protein_coding	26279176,26280765,26281058	26280203,26280932,26281522	Gene ID= ENSG00000142669.14 TPM= 37.65 Transcript Type= protein_coding
chr1	26282284	26318363	26282284	26318363	-	ENST00000374222.5@UBXN11	ENST00000374222.5	protein_coding	26318047,26306592,26302813,26301694,26300926,26297962,26297427,26296919,26294205,26285823,26285464,26284362,26284142,26282864,26282649,26282284	26318363,26306704,26302918,26301722,26301024,26298062,26297481,26296995,26294331,26286037,26285541,26284482,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 1.93 Transcript Type= protein_coding
chr1	26282281	26306640	26282281	26306640	-	ENST00000472155.5@UBXN11	ENST00000472155.5	protein_coding	26306592,26302813,26301694,26300926,26297962,26297427,26296919,26294205,26285823,26284362,26284142,26282864,26282649,26282281	26306640,26302918,26301722,26301024,26298062,26297481,26296995,26294331,26286037,26285541,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 1.77 Transcript Type= retained_intron
chr1	26282282	26306648	26282282	26306648	-	transcript2240.chr1.nic@UBXN11	transcript2240.chr1.nic	protein_coding	26306592,26301694,26297962,26297427,26296919,26294205,26285823,26285464,26284362,26284142,26282864,26282649,26282282	26306648,26301722,26298062,26297481,26296995,26294331,26286037,26285541,26284482,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 4.18 Transcript Type= NA
chr1	26282282	26306636	26282282	26306636	-	ENST00000475591.5@UBXN11	ENST00000475591.5	protein_coding	26306592,26302813,26301694,26297962,26297427,26296919,26294205,26285823,26284362,26284142,26282864,26282649,26282282	26306636,26302918,26301722,26298062,26297481,26296995,26294331,26286037,26285541,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 3.7 Transcript Type= retained_intron
chr1	26291423	26293142	26291423	26293142	-	transcript2243.chr1.nnic@NA	transcript2243.chr1.nnic	NA	26291423	26293142	Gene ID= novel_gene_chr1_2244 TPM= 1.93 Transcript Type= NA
chr1	26472519	26475972	26472519	26475972	+	ENST00000361427.5@HMGN2	ENST00000361427.5	protein_coding	26472519,26473483,26473703,26474085,26474572,26475113	26472627,26473527,26473732,26474135,26474667,26475972	Gene ID= ENSG00000198830.10 TPM= 98.46 Transcript Type= protein_coding
chr1	26787268	26798301	26787268	26798301	+	transcript2268.chr1.nic@PIGV	transcript2268.chr1.nic	protein_coding	26787268,26790759,26794113,26797563	26787989,26790893,26795234,26798301	Gene ID= ENSG00000060642.10 TPM= 5.79 Transcript Type= NA
chr1	26826695	26857601	26826695	26857601	+	transcript2278.chr1.nnic@ZDHHC18	transcript2278.chr1.nnic	protein_coding	26826695,26832447,26848608,26850301,26850558,26851129,26852753,26853726,26856848	26827139,26832607,26848757,26850438,26850606,26851231,26852865,26853825,26857601	Gene ID= ENSG00000204160.11 TPM= 5.79 Transcript Type= NA
chr1	26876133	26890297	26876133	26890297	-	ENST00000374135.8@GPN2	ENST00000374135.8	protein_coding	26889686,26888969,26885973,26884160,26876133	26890297,26889125,26886133,26884290,26879749	Gene ID= ENSG00000142751.14 TPM= 7.72 Transcript Type= protein_coding
chr1	26890489	26900466	26890489	26900466	-	ENST00000361720.9@GPATCH3	ENST00000361720.9	protein_coding	26899992,26897301,26894236,26893389,26892670,26892411,26890489	26900466,26897725,26894410,26893448,26892791,26892538,26891226	Gene ID= ENSG00000198746.12 TPM= 36.68 Transcript Type= protein_coding
chr1	26921726	26946862	26921726	26946862	+	ENST00000321265.9@NUDC	ENST00000321265.9	protein_coding	26921726,26924089,26941457,26941753,26942660,26942871,26945390,26945568,26946130	26921929,26924166,26941660,26941818,26942776,26943065,26945473,26945686,26946862	Gene ID= ENSG00000090273.13 TPM= 13.51 Transcript Type= protein_coding
chr1	26993707	27000898	26993707	27000898	+	ENST00000522111.2@TRNP1	ENST00000522111.2	protein_coding	26993707,26999847	26994612,27000898	Gene ID= ENSG00000253368.3 TPM= 1.93 Transcript Type= protein_coding
chr1	27005020	27012836	27005020	27012836	-	ENST00000289166.5@FAM46B	ENST00000289166.5	protein_coding	27012407,27005020	27012836,27006957	Gene ID= ENSG00000158246.7 TPM= 2.9 Transcript Type= protein_coding
chr1	27098815	27154910	27098815	27154910	-	ENST00000263980.7@SLC9A1	ENST00000263980.7	protein_coding	27153983,27113826,27109527,27107648,27105885,27103223,27102673,27102385,27102016,27101725,27101203,27098815	27154910,27114286,27109777,27107865,27106087,27103312,27102743,27102558,27102130,27101826,27101275,27100644	Gene ID= ENSG00000090020.10 TPM= 6.76 Transcript Type= protein_coding
chr1	27234516	27308633	27234516	27308633	+	ENST00000319394.7@WDTC1	ENST00000319394.7	protein_coding	27234516,27260956,27263152,27282239,27283338,27287674,27292215,27294022,27294514,27296326,27297048,27297938,27301226,27303621,27305001,27306186	27234951,27261102,27263235,27282285,27283449,27287861,27292397,27294116,27294629,27296401,27297156,27298111,27301461,27303795,27305193,27308633	Gene ID= ENSG00000142784.15 TPM= 10.62 Transcript Type= protein_coding
chr1	27322160	27336400	27322160	27336400	+	ENST00000374076.8@TMEM222	ENST00000374076.8	protein_coding	27322160,27330720,27332070,27333958,27334151,27335379	27322391,27330804,27332101,27334054,27334281,27336400	Gene ID= ENSG00000186501.14 TPM= 50.68 Transcript Type= protein_coding
chr1	27322247	27336400	27322247	27336400	+	ENST00000464720.5@TMEM222	ENST00000464720.5	protein_coding	27322247,27330720,27330985,27332070,27333958,27334151,27335379	27322391,27330804,27331137,27332101,27334054,27334281,27336400	Gene ID= ENSG00000186501.14 TPM= 12.07 Transcript Type= nonsense_mediated_decay
chr1	27355186	27366972	27355186	27366972	-	transcript2321.chr1.nnic@MAP3K6	transcript2321.chr1.nnic	protein_coding	27366258,27364773,27364661,27364204,27363917,27363442,27362851,27362641,27362091,27361705,27361520,27361346,27361157,27360921,27360705,27360241,27359858,27359417,27358709,27358419,27357711,27357400,27357009,27356590,27356388,27356026,27355669,27355186	27366972,27364912,27364684,27364394,27364085,27363548,27363021,27362753,27362250,27361867,27361627,27361395,27361252,27361008,27360838,27360368,27359994,27359522,27358866,27358611,27357876,27357576,27357114,27356749,27356500,27356099,27355745,27355469	Gene ID= ENSG00000142733.14 TPM= 8.21 Transcript Type= NA
chr1	27355186	27366972	27355186	27366972	-	transcript2323.chr1.nic@MAP3K6	transcript2323.chr1.nic	protein_coding	27366258,27364773,27364661,27364204,27363917,27362851,27362641,27362091,27361705,27361520,27361346,27361157,27360705,27360241,27359858,27359417,27358709,27358419,27357711,27356590,27356388,27356026,27355669,27355186	27366972,27364912,27364684,27364394,27364085,27363548,27362753,27362250,27361867,27361627,27361395,27361252,27361008,27360368,27359994,27359522,27358866,27358611,27358319,27357576,27356500,27356099,27355745,27355469	Gene ID= ENSG00000142733.14 TPM= 6.27 Transcript Type= NA
chr1	27369112	27374824	27369112	27374824	-	ENST00000270879.8@FCN3	ENST00000270879.8	protein_coding	27374728,27374356,27373965,27373488,27373136,27370843,27370596,27369112	27374824,27374451,27374009,27373520,27373263,27370972,27370730,27369477	Gene ID= ENSG00000142748.12 TPM= 7.72 Transcript Type= protein_coding
chr1	27416003	27490177	27416003	27490177	-	transcript2329.chr1.nic@WASF2	transcript2329.chr1.nic	protein_coding	27489986,27428761,27418954,27418269,27416003	27490177,27428933,27419088,27418422,27416102	Gene ID= ENSG00000158195.10 TPM= 11.58 Transcript Type= NA
chr1	27404226	27490158	27404226	27490158	-	ENST00000618852.4@WASF2	ENST00000618852.4	protein_coding	27489986,27428761,27418954,27418269,27415985,27414833,27412572,27409692,27404226	27490158,27428933,27419088,27418422,27416102,27414963,27412727,27410206,27408346	Gene ID= ENSG00000158195.10 TPM= 20.27 Transcript Type= protein_coding
chr1	27483667	27484820	27483667	27484820	+	transcript2331.chr1.nnic@NA	transcript2331.chr1.nnic	NA	27483667	27484820	Gene ID= novel_gene_chr1_2332 TPM= 2.9 Transcript Type= NA
chr1	27534035	27603591	27534035	27603591	-	ENST00000247087.9@AHDC1	ENST00000247087.9	protein_coding	27603397,27558706,27553074,27552892,27547261,27534035	27603591,27558883,27553185,27552929,27552189,27534916	Gene ID= ENSG00000126705.13 TPM= 28.48 Transcript Type= protein_coding
chr1	27534303	27603632	27534303	27603632	-	ENST00000374011.6@AHDC1	ENST00000374011.6	protein_coding	27603397,27558706,27558305,27553074,27552892,27547261,27534303	27603632,27558883,27558530,27553290,27552929,27552189,27534916	Gene ID= ENSG00000126705.13 TPM= 33.3 Transcript Type= protein_coding
chr1	27666061	27672218	27666061	27672218	-	ENST00000361157.10@IFI6	ENST00000361157.10	protein_coding	27672123,27669245,27668458,27668226,27666061	27672218,27669346,27668535,27668375,27666475	Gene ID= ENSG00000126709.14 TPM= 11.58 Transcript Type= protein_coding
chr1	27726028	27761964	27726028	27761964	+	ENST00000373949.5@FAM76A	ENST00000373949.5	protein_coding	27726028,27727472,27732603,27734031,27744654,27755195,27759526,27760495	27726161,27727536,27732657,27734183,27744811,27755330,27759627,27761964	Gene ID= ENSG00000009780.15 TPM= 5.79 Transcript Type= protein_coding
chr1	27773183	27824452	27773183	27824452	+	ENST00000373943.8@STX12	ENST00000373943.8	protein_coding	27773183,27789562,27793533,27801678,27810246,27812163,27817851,27819650,27822231	27773425,27789631,27793632,27801815,27810289,27812268,27817923,27819732,27824452	Gene ID= ENSG00000117758.13 TPM= 32.82 Transcript Type= protein_coding
chr1	27872568	27886673	27872568	27886673	+	ENST00000373921.7@THEMIS2	ENST00000373921.7	protein_coding	27872568,27876588,27879644,27881971,27885295,27885867	27872665,27876728,27880054,27883043,27885451,27886673	Gene ID= ENSG00000130775.15 TPM= 1.93 Transcript Type= protein_coding
chr1	27891524	27914743	27891524	27914743	-	ENST00000373912.7@RPA2	ENST00000373912.7	protein_coding	27914434,27914063,27907181,27906928,27897633,27897005,27894290,27894012,27891524	27914743,27914169,27907282,27907041,27897707,27897121,27894397,27894106,27892247	Gene ID= ENSG00000117748.9 TPM= 119.22 Transcript Type= protein_coding
chr1	27959462	27968096	27959462	27968096	+	ENST00000373884.5@XKR8	ENST00000373884.5	protein_coding	27959462,27963497,27966503	27960362,27963693,27968096	Gene ID= ENSG00000158156.7 TPM= 4.83 Transcript Type= protein_coding
chr1	27970344	28088696	27970344	28088696	-	ENST00000373871.7@EYA3	ENST00000373871.7	protein_coding	28088524,28057994,28048383,28042571,28038839,28035544,28027789,28017154,28013111,28010947,28004336,27999960,27997320,27993400,27989697,27988535,27978374,27970344	28088696,28058094,28048426,28042650,28038905,28035680,28027926,28017239,28013294,28011086,28004419,28000049,27997378,27993560,27989811,27988656,27978474,27974546	Gene ID= ENSG00000158161.15 TPM= 1.45 Transcript Type= protein_coding
chr1	27970347	28088637	27970347	28088637	-	ENST00000540618.5@EYA3	ENST00000540618.5	protein_coding	28088524,28057994,28048383,28042571,28038839,28035544,28017154,28013111,28010947,28004336,27999960,27997320,27993400,27989697,27988535,27978374,27970347	28088637,28058094,28048426,28042650,28038905,28035680,28017239,28013294,28011086,28004419,28000049,27997378,27993560,27989811,27988656,27978474,27974546	Gene ID= ENSG00000158161.15 TPM= 2.41 Transcript Type= protein_coding
chr1	28200559	28233025	28200559	28233025	-	ENST00000489277.5@DNAJC8	ENST00000489277.5	protein_coding	28232921,28230131,28228922,28214940,28210571,28209972,28208342,28205258,28203747,28200559	28233025,28230252,28229023,28214996,28210637,28210066,28208413,28205349,28203822,28201370	Gene ID= ENSG00000126698.10 TPM= 4.83 Transcript Type= processed_transcript
chr1	28200559	28233022	28200559	28233022	-	transcript2373.chr1.nnic@DNAJC8	transcript2373.chr1.nnic	protein_coding	28232921,28214940,28210571,28209972,28208342,28205258,28203747,28200559	28233022,28214996,28210637,28210066,28208413,28205349,28203822,28201370	Gene ID= ENSG00000126698.10 TPM= 2.9 Transcript Type= NA
chr1	28200559	28233036	28200559	28233036	-	transcript2374.chr1.nic@DNAJC8	transcript2374.chr1.nic	protein_coding	28232921,28228922,28214940,28209972,28208342,28205258,28203747,28200559	28233036,28229023,28214996,28210637,28208413,28205349,28203822,28201370	Gene ID= ENSG00000126698.10 TPM= 2.9 Transcript Type= NA
chr1	28209970	28233036	28209970	28233036	-	transcript2378.chr1.nic@DNAJC8	transcript2378.chr1.nic	protein_coding	28232921,28228922,28214940,28210571,28209970	28233036,28229023,28214996,28210637,28210066	Gene ID= ENSG00000126698.10 TPM= 5.79 Transcript Type= NA
chr1	28200278	28233025	28200278	28233025	-	ENST00000263697.5@DNAJC8	ENST00000263697.5	protein_coding	28232921,28228922,28214940,28210571,28209972,28208342,28205258,28203747,28200278	28233025,28229023,28214996,28210637,28210066,28208413,28205349,28203822,28201370	Gene ID= ENSG00000126698.10 TPM= 9.65 Transcript Type= protein_coding
chr1	28236133	28238100	28236133	28238100	+	ENST00000335514.9@ATPIF1	ENST00000335514.9	protein_coding	28236133,28236361,28237837	28236270,28236452,28238100	Gene ID= ENSG00000130770.17 TPM= 172.14 Transcript Type= protein_coding
chr1	28236154	28238098	28236154	28238098	+	ENST00000465645.1@ATPIF1	ENST00000465645.1	protein_coding	28236154,28236361	28236270,28238098	Gene ID= ENSG00000130770.17 TPM= 9.65 Transcript Type= protein_coding
chr1	28236109	28238105	28236109	28238105	+	ENST00000497986.5@ATPIF1	ENST00000497986.5	protein_coding	28236109,28236361,28237761	28236270,28236452,28238105	Gene ID= ENSG00000130770.17 TPM= 5.15 Transcript Type= protein_coding
chr1	28259480	28281463	28259480	28281463	+	transcript2385.chr1.nnic@SESN2	transcript2385.chr1.nnic	protein_coding	28259480,28269183,28271674,28272284,28272581,28273358,28274040,28274825,28279025,28280716	28259937,28269248,28271871,28272466,28272793,28273508,28274158,28275015,28279241,28281463	Gene ID= ENSG00000130766.4 TPM= 1.93 Transcript Type= NA
chr1	28259480	28281463	28259480	28281463	+	transcript2392.chr1.nic@SESN2	transcript2392.chr1.nic	protein_coding	28259480,28269183,28271674,28272284,28272581,28274040,28274825,28279097,28280716	28259937,28269248,28271871,28272466,28273508,28274158,28275015,28279241,28281463	Gene ID= ENSG00000130766.4 TPM= 1.93 Transcript Type= NA
chr1	28259527	28282491	28259527	28282491	+	ENST00000253063.3@SESN2	ENST00000253063.3	protein_coding	28259527,28269183,28271674,28272284,28272581,28273358,28274040,28274825,28279097,28280716	28259937,28269248,28271871,28272466,28272793,28273508,28274158,28275015,28279241,28282491	Gene ID= ENSG00000130766.4 TPM= 22.2 Transcript Type= protein_coding
chr1	28329038	28335967	28329038	28335967	+	ENST00000373842.8@MED18	ENST00000373842.8	protein_coding	28329038,28330597,28334417	28329180,28330735,28335967	Gene ID= ENSG00000130772.13 TPM= 11.58 Transcript Type= protein_coding
chr1	28506043	28509633	28506043	28509633	+	transcript2404.chr1.nnic@SNHG3	transcript2404.chr1.nnic	sense_intronic	28506043,28506220,28508128,28508830	28506084,28506327,28508160,28509633	Gene ID= ENSG00000242125.3 TPM= 2.9 Transcript Type= NA
chr1	28505980	28510892	28505980	28510892	+	ENST00000413987.1@SNHG3	ENST00000413987.1	sense_intronic	28505980,28508128,28508830	28506084,28508160,28510892	Gene ID= ENSG00000242125.3 TPM= 21.24 Transcript Type= retained_intron
chr1	28553085	28578545	28553085	28578545	+	ENST00000373830.4@TRNAU1AP	ENST00000373830.4	protein_coding	28553085,28553640,28560633,28561346,28564703,28567294,28571176,28571867,28577500	28553137,28553737,28560732,28561398,28564834,28567413,28571338,28571900,28578545	Gene ID= ENSG00000180098.9 TPM= 1.93 Transcript Type= protein_coding
chr1	28578538	28581834	28578538	28581834	-	ENST00000531126.5@SNHG12	ENST00000531126.5	antisense_RNA	28581590,28581111,28580560,28579912,28579533,28578538	28581834,28581229,28580646,28579981,28579587,28578680	Gene ID= ENSG00000197989.13 TPM= 7.72 Transcript Type= antisense_RNA
chr1	28603101	28643104	28603101	28643104	-	transcript2423.chr1.nic@TAF12	transcript2423.chr1.nic	protein_coding	28642992,28623946,28621914,28617953,28613247,28605372,28603101	28643104,28624030,28622165,28618030,28613361,28605460,28603574	Gene ID= ENSG00000120656.11 TPM= 25.1 Transcript Type= NA
chr1	28605166	28643114	28605166	28643114	-	transcript2428.chr1.nic@TAF12	transcript2428.chr1.nic	protein_coding	28642992,28621914,28617953,28613247,28605166	28643114,28622165,28618030,28613361,28605460	Gene ID= ENSG00000120656.11 TPM= 1.93 Transcript Type= NA
chr1	28668780	28714873	28668780	28714873	+	ENST00000294409.2@GMEB1	ENST00000294409.2	protein_coding	28668780,28683583,28690074,28691585,28692942,28696927,28702438,28704192,28710520,28714073	28668839,28683740,28690186,28691709,28693045,28697084,28702569,28704329,28710642,28714873	Gene ID= ENSG00000162419.12 TPM= 2.9 Transcript Type= protein_coding
chr1	28668778	28714886	28668778	28714886	+	ENST00000361872.8@GMEB1	ENST00000361872.8	protein_coding	28668778,28683586,28690104,28691585,28692942,28696927,28702438,28704192,28710520,28714073	28668839,28683740,28690186,28691709,28693045,28697084,28702569,28704329,28710642,28714886	Gene ID= ENSG00000162419.12 TPM= 7.72 Transcript Type= protein_coding
chr1	28736759	28769775	28736759	28769775	+	ENST00000373812.7@YTHDF2	ENST00000373812.7	protein_coding	28736759,28737658,28738259,28742403,28768929	28737147,28737682,28738338,28743986,28769775	Gene ID= ENSG00000198492.15 TPM= 75.29 Transcript Type= protein_coding
chr1	28736935	28769772	28736935	28769772	+	transcript2441.chr1.nnic@YTHDF2	transcript2441.chr1.nnic	protein_coding	28736935,28737658,28738259,28768929	28737147,28737682,28738338,28769772	Gene ID= ENSG00000198492.15 TPM= 5.79 Transcript Type= NA
chr1	28887058	29053305	28887058	29053305	+	transcript2445.chr1.nic@EPB41	transcript2445.chr1.nic	protein_coding	28887058,28987448,28993330,28997215,29011865,29015692,29018224,29030400,29033093,29035826,29039254,29053104	28887210,28987905,28993542,28997319,29011907,29015767,29018442,29030487,29033245,29035923,29039426,29053305	Gene ID= ENSG00000159023.19 TPM= 3.86 Transcript Type= NA
chr1	29147743	29181900	29147743	29181900	-	transcript2455.chr1.nic@SRSF4	transcript2455.chr1.nic	protein_coding	29181646,29168503,29166729,29165890,29160375,29159374,29154696,29150103,29147743	29181900,29168638,29166912,29166064,29160517,29159486,29154910,29150192,29149226	Gene ID= ENSG00000116350.16 TPM= 13.51 Transcript Type= NA
chr1	29147743	29181987	29147743	29181987	-	ENST00000373795.6@SRSF4	ENST00000373795.6	protein_coding	29181646,29160375,29159374,29154696,29150103,29147743	29181987,29160517,29159486,29154910,29150192,29149226	Gene ID= ENSG00000116350.16 TPM= 172.31 Transcript Type= protein_coding
chr1	29178522	29181939	29178522	29181939	-	transcript2475.chr1.nnic@NA	transcript2475.chr1.nnic	NA	29178522	29181939	Gene ID= novel_gene_chr1_2476 TPM= 5.79 Transcript Type= NA
chr1	29181505	29183017	29181505	29183017	+	transcript2473.chr1.nnic@NA	transcript2473.chr1.nnic	NA	29181505	29183017	Gene ID= novel_gene_chr1_2474 TPM= 2.9 Transcript Type= NA
chr1	29193817	29230954	29193817	29230954	-	transcript2480.chr1.nnic@MECR	transcript2480.chr1.nnic	protein_coding	29230731,29216588,29216005,29206762,29203131,29201943,29201374,29200410,29196198,29195941,29193817	29230954,29216685,29216136,29206905,29203233,29202045,29201518,29200589,29196258,29196013,29194179	Gene ID= ENSG00000116353.15 TPM= 2.41 Transcript Type= NA
chr1	29199620	29230954	29199620	29230954	-	transcript2488.chr1.nic@MECR	transcript2488.chr1.nic	protein_coding	29230731,29216588,29216005,29206762,29203131,29201943,29199620	29230954,29216685,29216136,29206905,29203233,29202045,29200589	Gene ID= ENSG00000116353.15 TPM= 1.93 Transcript Type= NA
chr1	29226207	29230924	29226207	29230924	-	transcript2490.chr1.nnic@MECR	transcript2490.chr1.nnic	protein_coding	29230731,29226207	29230924,29226315	Gene ID= ENSG00000116353.15 TPM= 1.93 Transcript Type= NA
chr1	29193817	29230932	29193817	29230932	-	ENST00000263702.10@MECR	ENST00000263702.10	protein_coding	29230731,29216588,29216005,29206762,29203131,29201943,29200516,29196198,29195941,29193817	29230932,29216685,29216136,29206905,29203233,29202045,29200589,29196258,29196013,29194179	Gene ID= ENSG00000116353.15 TPM= 23.65 Transcript Type= protein_coding
chr1	29236516	29326800	29236516	29326800	+	ENST00000373779.7@PTPRU	ENST00000373779.7	protein_coding	29236516,29255275,29258505,29259261,29259449,29259870,29260610,29275448,29279012,29279456,29280039,29282676,29283940,29284731,29291869,29303855,29304774,29305352,29310744,29311456,29311643,29312552,29315372,29316002,29317748,29320685,29323371,29323631,29325191,29325599	29236717,29255406,29258776,29259342,29259564,29260044,29260903,29275756,29279121,29279657,29280141,29282949,29283976,29284869,29292026,29304045,29304849,29305428,29310780,29311553,29311759,29312706,29315507,29316151,29317921,29320825,29323496,29323788,29325326,29326800	Gene ID= ENSG00000060656.19 TPM= 32.82 Transcript Type= protein_coding
chr1	30732469	30757820	30732469	30757820	-	ENST00000294507.3@LAPTM5	ENST00000294507.3	protein_coding	30757659,30742456,30741640,30739809,30738940,30737604,30735173,30732469	30757820,30742549,30741716,30739937,30739062,30737699,30735265,30733917	Gene ID= ENSG00000162511.7 TPM= 15.44 Transcript Type= protein_coding
chr1	30932826	31065725	30932826	31065725	-	transcript2507.chr1.nic@PUM1	transcript2507.chr1.nic	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941998,30941151,30936643,30932826	31065725,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980178,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 8.33 Transcript Type= NA
chr1	30932826	31065725	30932826	31065725	-	transcript2511.chr1.nic@PUM1	transcript2511.chr1.nic	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932826	31065725,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 7.17 Transcript Type= NA
chr1	30932826	31065725	30932826	31065725	-	transcript2515.chr1.nic@PUM1	transcript2515.chr1.nic	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941151,30936643,30932826	31065725,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 3.19 Transcript Type= NA
chr1	30932826	31065725	30932826	31065725	-	transcript2523.chr1.nic@PUM1	transcript2523.chr1.nic	protein_coding	31065616,31059204,31028796,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941151,30936643,30932826	31065725,31059577,31028864,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 3.48 Transcript Type= NA
chr1	30932826	31065695	30932826	31065695	-	ENST00000426105.6@PUM1	ENST00000426105.6	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932826	31065695,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 33.43 Transcript Type= protein_coding
chr1	30932844	31065684	30932844	31065684	-	ENST00000440538.6@PUM1	ENST00000440538.6	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932844	31065684,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967310,30966197,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 11.78 Transcript Type= protein_coding
chr1	30932850	31065991	30932850	31065991	-	ENST00000373741.8@PUM1	ENST00000373741.8	protein_coding	31065689,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932850	31065991,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 1.16 Transcript Type= protein_coding
chr1	30990168	30991831	30990168	30991831	+	transcript2528.chr1.nnic@NA	transcript2528.chr1.nnic	NA	30990168	30991831	Gene ID= novel_gene_chr1_2529 TPM= 1.93 Transcript Type= NA
chr1	31179347	31181651	31179347	31181651	-	transcript2532.chr1.nnic@NA	transcript2532.chr1.nnic	NA	31179347	31181651	Gene ID= novel_gene_chr1_2533 TPM= 3.86 Transcript Type= NA
chr1	31259678	31296796	31259678	31296796	-	transcript2534.chr1.nnic@SNRNP40	transcript2534.chr1.nnic	protein_coding	31296611,31293219,31291913,31289254,31281374,31271379,31269158,31267871,31261529,31260955,31259678	31296796,31293348,31292006,31289419,31281496,31271499,31269240,31267932,31261632,31261176,31260121	Gene ID= ENSG00000060688.12 TPM= 1.93 Transcript Type= NA
chr1	31259568	31296770	31259568	31296770	-	ENST00000263694.8@SNRNP40	ENST00000263694.8	protein_coding	31296611,31293219,31291913,31289254,31281374,31271379,31269158,31267871,31261529,31259568	31296770,31293348,31292006,31289419,31281496,31271499,31269240,31267932,31261632,31260121	Gene ID= ENSG00000060688.12 TPM= 8.69 Transcript Type= protein_coding
chr1	31296982	31364953	31296982	31364953	+	ENST00000546109.5@ZCCHC17	ENST00000546109.5	protein_coding	31296982,31310044,31318167,31319109,31337175,31338957,31346640,31348829,31364032	31297075,31310164,31318236,31319166,31337275,31339048,31346740,31348974,31364953	Gene ID= ENSG00000121766.15 TPM= 2.17 Transcript Type= protein_coding
chr1	31296995	31364936	31296995	31364936	+	ENST00000344147.9@ZCCHC17	ENST00000344147.9	protein_coding	31296995,31310044,31319109,31337175,31338957,31346640,31348829,31364032	31297075,31310164,31319166,31337275,31339048,31346740,31348974,31364936	Gene ID= ENSG00000121766.15 TPM= 12.79 Transcript Type= protein_coding
chr1	31296982	31364953	31296982	31364953	+	ENST00000618216.4@ZCCHC17	ENST00000618216.4	protein_coding	31296982,31310044,31319109,31337175,31338957,31346640,31364032	31297075,31310164,31319166,31337275,31339048,31346740,31364953	Gene ID= ENSG00000121766.15 TPM= 1.21 Transcript Type= protein_coding
chr1	31296982	31364953	31296982	31364953	+	ENST00000616393.4@ZCCHC17	ENST00000616393.4	protein_coding	31296982,31310044,31319109,31338957,31346640,31348829,31364032	31297075,31310164,31319166,31339048,31346740,31348974,31364953	Gene ID= ENSG00000121766.15 TPM= 1.21 Transcript Type= protein_coding
chr1	31364611	31365720	31364611	31365720	+	transcript2616.chr1.nnic@NA	transcript2616.chr1.nnic	NA	31364611	31365720	Gene ID= novel_gene_chr1_2617 TPM= 14.48 Transcript Type= NA
chr1	31365625	31373076	31365625	31373076	-	ENST00000373713.6@FABP3	ENST00000373713.6	protein_coding	31372942,31369385,31367393,31365625	31373076,31369557,31367494,31365939	Gene ID= ENSG00000121769.7 TPM= 1821.46 Transcript Type= protein_coding
chr1	31365462	31373076	31365462	31373076	-	transcript2601.chr1.nnic@FABP3	transcript2601.chr1.nnic	protein_coding	31372942,31367393,31365462	31373076,31367494,31365939	Gene ID= ENSG00000121769.7 TPM= 52.45 Transcript Type= NA
chr1	31412932	31434677	31412932	31434677	+	transcript2623.chr1.nnic@SERINC2	transcript2623.chr1.nnic	protein_coding	31412932,31423693,31424683,31425330,31425776,31426654,31428978,31429397,31432967,31434064	31413097,31423854,31424873,31425409,31425913,31426823,31429068,31429538,31433185,31434677	Gene ID= ENSG00000168528.11 TPM= 14 Transcript Type= NA
chr1	31413116	31434678	31413116	31434678	+	ENST00000373709.7@SERINC2	ENST00000373709.7	protein_coding	31413116,31423693,31424683,31425330,31425776,31426654,31428978,31429397,31432967,31434064	31413304,31423854,31424873,31425409,31425913,31426823,31429068,31429538,31433185,31434678	Gene ID= ENSG00000168528.11 TPM= 68.05 Transcript Type= protein_coding
chr1	31413213	31414385	31413213	31414385	+	transcript2630.chr1.nnic@NA	transcript2630.chr1.nnic	NA	31413213	31414385	Gene ID= novel_gene_chr1_2631 TPM= 15.44 Transcript Type= NA
chr1	31576504	31587686	31576504	31587686	+	transcript2635.chr1.nnic@TINAGL1	transcript2635.chr1.nnic	protein_coding	31576504,31577134,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31586710,31586839	31576595,31577458,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 8.37 Transcript Type= NA
chr1	31576509	31587686	31576509	31587686	+	transcript2636.chr1.nic@TINAGL1	transcript2636.chr1.nic	protein_coding	31576509,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586710,31586839	31576595,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31585876,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 8.52 Transcript Type= NA
chr1	31576504	31587686	31576504	31587686	+	transcript2640.chr1.nic@TINAGL1	transcript2640.chr1.nic	protein_coding	31576504,31577134,31579204,31583149,31584678,31584886,31585440,31585753,31586839	31576595,31577458,31579267,31583575,31584801,31585340,31585485,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 3.21 Transcript Type= NA
chr1	31576535	31587686	31576535	31587686	+	ENST00000271064.11@TINAGL1	ENST00000271064.11	protein_coding	31576535,31577134,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586710,31586839	31576595,31577458,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31585876,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 78.35 Transcript Type= protein_coding
chr1	31629862	31644906	31629862	31644906	-	transcript2645.chr1.nic@PEF1	transcript2645.chr1.nic	protein_coding	31644841,31635222,31634834,31633159,31632495,31629862	31644906,31635522,31634943,31633314,31632638,31630842	Gene ID= ENSG00000162517.12 TPM= 2.9 Transcript Type= NA
chr1	31629862	31644887	31629862	31644887	-	ENST00000373703.4@PEF1	ENST00000373703.4	protein_coding	31644841,31635222,31633159,31632495,31629862	31644887,31635522,31633314,31632638,31630842	Gene ID= ENSG00000162517.12 TPM= 68.54 Transcript Type= protein_coding
chr1	31640781	31644444	31640781	31644444	-	transcript2659.chr1.nnic@NA	transcript2659.chr1.nnic	NA	31640781	31644444	Gene ID= novel_gene_chr1_2660 TPM= 1.93 Transcript Type= NA
chr1	31652511	31670422	31652511	31670422	-	transcript2665.chr1.nic@COL16A1	transcript2665.chr1.nic	protein_coding	31669811,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652511	31670422,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853	Gene ID= ENSG00000084636.17 TPM= 1.93 Transcript Type= NA
chr1	31908230	31938416	31908230	31938416	-	transcript2695.chr1.nic@PTP4A2	transcript2695.chr1.nic	protein_coding	31937987,31918970,31911696,31910038,31908230	31938416,31919658,31911826,31910112,31908960	Gene ID= ENSG00000184007.18 TPM= 24.49 Transcript Type= NA
chr1	31906421	31919483	31906421	31919483	-	ENST00000602725.5@PTP4A2	ENST00000602725.5	protein_coding	31918970,31915895,31911696,31910038,31906421	31919483,31915987,31911826,31910112,31908960	Gene ID= ENSG00000184007.18 TPM= 67.57 Transcript Type= protein_coding
chr1	31938008	31939039	31938008	31939039	+	transcript2713.chr1.nnic@NA	transcript2713.chr1.nnic	NA	31938008	31939039	Gene ID= novel_gene_chr1_2714 TPM= 7.72 Transcript Type= NA
chr1	32013829	32043882	32013829	32043882	+	ENST00000327300.11@KHDRBS1	ENST00000327300.11	protein_coding	32013829,32030298,32031524,32033188,32036910,32037835,32038552,32039515,32042527	32014377,32030422,32031640,32033334,32037043,32038036,32038619,32039573,32043882	Gene ID= ENSG00000121774.17 TPM= 119.7 Transcript Type= protein_coding
chr1	32072902	32102861	32072902	32102861	+	ENST00000336294.9@TMEM39B	ENST00000336294.9	protein_coding	32072902,32074951,32075603,32076763,32077164,32091675,32094784,32100442,32102431	32073051,32075077,32075822,32076846,32077318,32092011,32094971,32100562,32102861	Gene ID= ENSG00000121775.17 TPM= 7.72 Transcript Type= protein_coding
chr1	32108090	32173173	32108090	32173173	+	transcript2731.chr1.nnic@KPNA6	transcript2731.chr1.nnic	protein_coding	32108090,32139755,32154588,32156853,32157346,32158267,32159400,32160615,32161947,32162361,32163235,32166105,32167169,32169882,32170707	32108134,32139864,32154721,32156945,32157445,32158361,32159531,32160703,32162046,32162524,32163313,32166230,32167296,32170060,32173173	Gene ID= ENSG00000025800.13 TPM= 1.93 Transcript Type= NA
chr1	32108058	32173173	32108058	32173173	+	ENST00000471599.5@KPNA6	ENST00000471599.5	protein_coding	32108058,32154588,32156853,32157346,32158267,32159400,32160619,32161947,32162361,32163235,32166105,32167169,32169882,32170707	32108134,32154721,32156927,32157445,32158361,32159531,32160703,32162046,32162524,32163313,32166230,32167296,32170060,32173173	Gene ID= ENSG00000025800.13 TPM= 42.47 Transcript Type= nonsense_mediated_decay
chr1	32108038	32176568	32108038	32176568	+	ENST00000373625.7@KPNA6	ENST00000373625.7	protein_coding	32108038,32154588,32156853,32157346,32158267,32159400,32160615,32161947,32162361,32163235,32166105,32167169,32169882,32170707	32108134,32154721,32156945,32157445,32158361,32159531,32160703,32162046,32162524,32163313,32166230,32167296,32170060,32176568	Gene ID= ENSG00000025800.13 TPM= 90.74 Transcript Type= protein_coding
chr1	32179705	32196521	32179705	32196521	+	transcript2738.chr1.nnic@TXLNA	transcript2738.chr1.nnic	protein_coding	32179705,32180314,32181242,32184525,32187954,32190055,32192311,32192657,32193208,32194065,32194902,32196021	32179776,32180514,32181577,32184616,32188124,32190249,32192430,32192731,32193300,32194160,32194937,32196521	Gene ID= ENSG00000084652.15 TPM= 1.93 Transcript Type= NA
chr1	32180065	32198285	32180065	32198285	+	ENST00000373609.1@TXLNA	ENST00000373609.1	protein_coding	32180065,32181242,32184525,32187954,32190055,32192311,32192657,32193208,32194065,32194902	32180514,32181577,32184616,32188124,32190249,32192430,32192731,32193300,32194160,32198285	Gene ID= ENSG00000084652.15 TPM= 88.81 Transcript Type= protein_coding
chr1	32200595	32205387	32200595	32205387	+	transcript2745.chr1.nic@CCDC28B	transcript2745.chr1.nic	protein_coding	32200595,32201913,32203879,32204598,32205194	32200709,32202099,32204045,32204620,32205387	Gene ID= ENSG00000160050.14 TPM= 27.03 Transcript Type= NA
chr1	32200618	32205387	32200618	32205387	+	transcript2747.chr1.nic@CCDC28B	transcript2747.chr1.nic	protein_coding	32200618,32201913,32203879,32204598	32200709,32202099,32204045,32205387	Gene ID= ENSG00000160050.14 TPM= 2.9 Transcript Type= NA
chr1	32200386	32205387	32200386	32205387	+	ENST00000373602.9@CCDC28B	ENST00000373602.9	protein_coding	32200386,32201913,32203879,32204186,32204598,32205194	32200709,32202099,32204045,32204379,32204620,32205387	Gene ID= ENSG00000160050.14 TPM= 76.26 Transcript Type= protein_coding
chr1	32205661	32208687	32205661	32208687	+	ENST00000291358.10@IQCC	ENST00000291358.10	protein_coding	32205661,32206154,32206509,32207002,32207240	32205723,32206297,32206761,32207120,32208687	Gene ID= ENSG00000160051.11 TPM= 1.93 Transcript Type= protein_coding
chr1	32216197	32222325	32216197	32222325	-	ENST00000309777.10@TMEM234	ENST00000309777.10	protein_coding	32222307,32221867,32221131,32217259,32216197	32222325,32222018,32221197,32217351,32216947	Gene ID= ENSG00000160055.19 TPM= 4.83 Transcript Type= protein_coding
chr1	32222370	32231604	32222370	32231604	+	ENST00000373586.1@EIF3I	ENST00000373586.1	protein_coding	32222370,32222538,32224034,32224410,32226171,32226403,32228499,32228727,32229135,32230927,32231115	32222444,32222630,32224121,32224475,32226320,32226530,32228609,32228816,32229208,32231019,32231604	Gene ID= ENSG00000084623.11 TPM= 201.75 Transcript Type= protein_coding
chr1	32240475	32242391	32240475	32242391	+	transcript2765.chr1.nnic@NA	transcript2765.chr1.nnic	NA	32240475	32242391	Gene ID= novel_gene_chr1_2766 TPM= 3.86 Transcript Type= NA
chr1	32292073	32333635	32292073	32333635	+	transcript2768.chr1.nic@HDAC1	transcript2768.chr1.nic	protein_coding	32292073,32302621,32316665,32324479,32326939,32327536,32329068,32330578,32330768,32331474,32331676,32332090,32332701,32333017	32292218,32302733,32316782,32324553,32327458,32327677,32329160,32330686,32330908,32331582,32331806,32332242,32332749,32333635	Gene ID= ENSG00000116478.11 TPM= 2.41 Transcript Type= NA
chr1	32292086	32333635	32292086	32333635	+	ENST00000373548.7@HDAC1	ENST00000373548.7	protein_coding	32292086,32302621,32316665,32324479,32326939,32327536,32329068,32330578,32330768,32331474,32331676,32332090,32332701,32333017	32292218,32302733,32316782,32324553,32327077,32327677,32329160,32330686,32330908,32331582,32331806,32332242,32332749,32333635	Gene ID= ENSG00000116478.11 TPM= 19.79 Transcript Type= protein_coding
chr1	32333832	32336379	32333832	32336379	-	ENST00000329421.7@MARCKSL1	ENST00000329421.7	protein_coding	32335947,32333832	32336379,32335097	Gene ID= ENSG00000175130.6 TPM= 42.47 Transcript Type= protein_coding
chr1	32361271	32364223	32361271	32364223	-	ENST00000416512.1@FAM229A	ENST00000416512.1	protein_coding	32361730,32361271	32364223,32361535	Gene ID= ENSG00000225828.1 TPM= 1.93 Transcript Type= retained_intron
chr1	32368033	32394455	32368033	32394455	-	transcript2789.chr1.nic@BSDC1	transcript2789.chr1.nic	protein_coding	32394404,32394080,32386779,32383830,32381214,32378724,32378215,32377970,32376262,32368033	32394455,32394140,32386895,32383997,32381268,32378839,32378283,32378048,32376741,32368550	Gene ID= ENSG00000160058.18 TPM= 2.9 Transcript Type= NA
chr1	32365113	32394428	32365113	32394428	-	ENST00000444377.5@BSDC1	ENST00000444377.5	protein_coding	32394404,32394080,32386779,32383830,32381214,32378724,32378215,32377970,32376262,32369230,32368447,32365113	32394428,32394140,32386895,32383997,32381268,32378839,32378283,32378048,32376741,32369338,32368550,32366654	Gene ID= ENSG00000160058.18 TPM= 7.24 Transcript Type= nonsense_mediated_decay
chr1	32365103	32394448	32365103	32394448	-	ENST00000455895.6@BSDC1	ENST00000455895.6	protein_coding	32394404,32394080,32386779,32383830,32381214,32378724,32378215,32377970,32376262,32368447,32365103	32394448,32394140,32386895,32383997,32381268,32378839,32378283,32378048,32376741,32368550,32366654	Gene ID= ENSG00000160058.18 TPM= 27.51 Transcript Type= protein_coding
chr1	32383771	32386338	32383771	32386338	+	transcript2792.chr1.nnic@NA	transcript2792.chr1.nnic	NA	32383771	32386338	Gene ID= novel_gene_chr1_2793 TPM= 14.48 Transcript Type= NA
chr1	32620820	32650584	32620820	32650584	-	ENST00000468695.5@ZBTB8OS	ENST00000468695.5	protein_coding	32650433,32634768,32633951,32633645,32631827,32627508,32620820	32650584,32634792,32634072,32633727,32631879,32627544,32621948	Gene ID= ENSG00000176261.15 TPM= 4.83 Transcript Type= protein_coding
chr1	32621830	32650560	32621830	32650560	-	ENST00000436661.5@ZBTB8OS	ENST00000436661.5	protein_coding	32650433,32634768,32633951,32633645,32627508,32621830	32650560,32634792,32634072,32633727,32627544,32621948	Gene ID= ENSG00000176261.15 TPM= 3.38 Transcript Type= protein_coding
chr1	32621841	32650550	32621841	32650550	-	ENST00000476493.5@ZBTB8OS	ENST00000476493.5	protein_coding	32650429,32634768,32633951,32633645,32631827,32627508,32621841	32650550,32634792,32634110,32633727,32631879,32627544,32621948	Gene ID= ENSG00000176261.15 TPM= 2.41 Transcript Type= nonsense_mediated_decay
chr1	32651148	32686211	32651148	32686211	+	ENST00000373493.9@RBBP4	ENST00000373493.9	protein_coding	32651148,32651914,32657427,32668225,32668739,32668972,32669231,32669486,32672450,32672642,32672791,32679640	32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32672901,32686211	Gene ID= ENSG00000162521.18 TPM= 18.9 Transcript Type= protein_coding
chr1	32651148	32680653	32651148	32680653	+	transcript2818.chr1.nnic@RBBP4	transcript2818.chr1.nnic	protein_coding	32651148,32651914,32657427,32668225,32668739,32668972,32669324,32669486,32672450,32672642,32672791,32679640	32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32672901,32680653	Gene ID= ENSG00000162521.18 TPM= 3.94 Transcript Type= NA
chr1	32651148	32673111	32651148	32673111	+	transcript2819.chr1.nic@RBBP4	transcript2819.chr1.nic	protein_coding	32651148,32651914,32657427,32668225,32668739,32668972,32669231,32669486,32672450,32672642,32672791	32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32673111	Gene ID= ENSG00000162521.18 TPM= 3.46 Transcript Type= NA
chr1	32651234	32680657	32651234	32680657	+	ENST00000373485.5@RBBP4	ENST00000373485.5	protein_coding	32651234,32651914,32657427,32668225,32668739,32668972,32669231,32669486,32672450,32672642,32672791,32680526	32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32672901,32680657	Gene ID= ENSG00000162521.18 TPM= 1.21 Transcript Type= protein_coding
chr1	32775239	32818153	32775239	32818153	-	ENST00000373477.8@YARS	ENST00000373477.8	protein_coding	32817188,32810911,32810591,32806482,32797763,32791162,32786940,32786362,32782404,32781048,32780085,32779382,32775239	32818153,32811057,32810766,32806611,32797843,32791254,32787075,32786447,32782539,32781145,32780278,32779523,32776091	Gene ID= ENSG00000134684.10 TPM= 23.49 Transcript Type= protein_coding
chr1	32775244	32817379	32775244	32817379	-	transcript2868.chr1.nnic@YARS	transcript2868.chr1.nnic	protein_coding	32817188,32810591,32806482,32797763,32791162,32786940,32786362,32782404,32781048,32780085,32779382,32775244	32817379,32810766,32806611,32797843,32791254,32787075,32786447,32782539,32781145,32780278,32779523,32776091	Gene ID= ENSG00000134684.10 TPM= 9.97 Transcript Type= NA
chr1	32775244	32817293	32775244	32817293	-	transcript2869.chr1.nnic@YARS	transcript2869.chr1.nnic	protein_coding	32817188,32806482,32797763,32791162,32786940,32786362,32782404,32781048,32780085,32779382,32775244	32817293,32806611,32797843,32791254,32787075,32786447,32782539,32781145,32780278,32779523,32776091	Gene ID= ENSG00000134684.10 TPM= 5.15 Transcript Type= NA
chr1	32817555	32858879	32817555	32858879	+	ENST00000373475.9@S100PBP	ENST00000373475.9	protein_coding	32817555,32825313,32826098,32827993,32829964,32853079,32855924	32817689,32825429,32826930,32828081,32830067,32853166,32858879	Gene ID= ENSG00000116497.17 TPM= 8.69 Transcript Type= protein_coding
chr1	32863007	32864801	32863007	32864801	+	transcript2882.chr1.nnic@NA	transcript2882.chr1.nnic	NA	32863007	32864801	Gene ID= novel_gene_chr1_2883 TPM= 14.48 Transcript Type= NA
chr1	32894595	32901358	32894595	32901358	-	ENST00000373463.7@TMEM54	ENST00000373463.7	protein_coding	32901223,32898126,32895910,32895555,32895305,32894595	32901358,32898319,32895969,32895743,32895439,32894879	Gene ID= ENSG00000121900.18 TPM= 19.31 Transcript Type= protein_coding
chr1	32929035	32929206	32929035	32929206	-	transcript2888.chr1.nnic@NA	transcript2888.chr1.nnic	NA	32929035	32929206	Gene ID= novel_gene_chr1_2889 TPM= 1.93 Transcript Type= NA
chr1	32936454	32964913	32936454	32964913	-	transcript2895.chr1.nnic@RNF19B	transcript2895.chr1.nnic	protein_coding	32964051,32949569,32948222,32946402,32945514,32944019,32942252,32936454	32964913,32949774,32948363,32946564,32945628,32944159,32942459,32937259	Gene ID= ENSG00000116514.16 TPM= 3.86 Transcript Type= NA
chr1	33008883	33036867	33008883	33036867	-	transcript2896.chr1.nic@AK2	transcript2896.chr1.nic	protein_coding	33036736,33031544,33024442,33021593,33021367,33014522,33013207,33008883	33036867,33031661,33024567,33021703,33021461,33014594,33013402,33010833	Gene ID= ENSG00000004455.16 TPM= 4.18 Transcript Type= NA
chr1	33013044	33036992	33013044	33036992	-	ENST00000354858.10@AK2	ENST00000354858.10	protein_coding	33036736,33024442,33021593,33021367,33014522,33013044	33036992,33024567,33021703,33021461,33014594,33013402	Gene ID= ENSG00000004455.16 TPM= 90.74 Transcript Type= protein_coding
chr1	33323626	33349941	33323626	33349941	-	transcript2931.chr1.nnic@PHC2	transcript2931.chr1.nnic	protein_coding	33349597,33335166,33334090,33332275,33331348,33330071,33328870,33323626	33349941,33335359,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 45.97 Transcript Type= NA
chr1	33323626	33349958	33323626	33349958	-	transcript2949.chr1.nic@PHC2	transcript2949.chr1.nic	protein_coding	33349597,33334185,33332275,33331348,33330071,33328870,33323626	33349958,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 250.26 Transcript Type= NA
chr1	33323626	33349885	33323626	33349885	-	ENST00000373418.7@PHC2	ENST00000373418.7	protein_coding	33349597,33334090,33332275,33331348,33330071,33328870,33323626	33349885,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 439.33 Transcript Type= protein_coding
chr1	34792998	34795747	34792998	34795747	+	ENST00000342280.4@GJA4	ENST00000342280.4	protein_coding	34792998,34794197	34793068,34795747	Gene ID= ENSG00000187513.8 TPM= 5.79 Transcript Type= protein_coding
chr1	34852669	34859816	34852669	34859816	-	ENST00000521580.2@SMIM12	ENST00000521580.2	protein_coding	34859677,34852669	34859816,34855982	Gene ID= ENSG00000163866.8 TPM= 8.69 Transcript Type= protein_coding
chr1	34974356	34985313	34974356	34985313	-	ENST00000417456.1@AC114490.1	ENST00000417456.1	processed_transcript	34985198,34974356	34985313,34977402	Gene ID= ENSG00000241014.1 TPM= 1.93 Transcript Type= sense_overlapping
chr1	34981535	34985353	34981535	34985353	-	ENST00000373337.3@TMEM35B	ENST00000373337.3	protein_coding	34985198,34983767,34981535	34985353,34983947,34982119	Gene ID= ENSG00000243749.1 TPM= 8.69 Transcript Type= protein_coding
chr1	34986980	35031968	34986980	35031968	-	ENST00000357182.8@ZMYM6	ENST00000357182.8	protein_coding	35031815,35030547,35020383,35019353,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34986980	35031968,35030713,35020467,35019602,35015162,35014888,35012581,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34988935	Gene ID= ENSG00000163867.16 TPM= 1.93 Transcript Type= protein_coding
chr1	34988181	35031952	34988181	35031952	-	transcript2978.chr1.nnic@ZMYM6	transcript2978.chr1.nnic	protein_coding	35031815,35020383,35019353,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34988181	35031952,35020467,35019602,35015162,35014888,35012453,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34988935	Gene ID= ENSG00000163867.16 TPM= 1.93 Transcript Type= NA
chr1	35176380	35193149	35176380	35193149	-	transcript2998.chr1.nic@SFPQ	transcript2998.chr1.nic	protein_coding	35192222,35191341,35190694,35190498,35189186,35189003,35187973,35187203,35187001,35177989,35177319,35176380	35193149,35191529,35190995,35190593,35189382,35189087,35188090,35187251,35187122,35178036,35177399,35176471	Gene ID= ENSG00000116560.10 TPM= 31.01 Transcript Type= NA
chr1	35182932	35193148	35182932	35193148	-	ENST00000357214.5@SFPQ	ENST00000357214.5	protein_coding	35192222,35191341,35190694,35190498,35189186,35189003,35187973,35187203,35187001,35182932	35193148,35191529,35190995,35190593,35189382,35189087,35188090,35187251,35187122,35184593	Gene ID= ENSG00000116560.10 TPM= 88.97 Transcript Type= protein_coding
chr1	35268823	35421704	35268823	35421704	+	transcript3023.chr1.nnic@ZMYM4	transcript3023.chr1.nnic	protein_coding	35268823,35325360,35370029,35381259,35381546,35385442,35386074,35387003,35387454,35388910,35389948,35392212,35392647,35393595,35396552,35397377,35398413,35398864,35399482,35405023,35405373,35408008,35413972,35415466,35418443,35419470	35269085,35325405,35370113,35381433,35381758,35385592,35386189,35387278,35387604,35389082,35390098,35392352,35392684,35393739,35396670,35397545,35398466,35399043,35399576,35405194,35405468,35408159,35414083,35415714,35418572,35421704	Gene ID= ENSG00000146463.11 TPM= 1.93 Transcript Type= NA
chr1	35434105	35557420	35434105	35557420	-	transcript3034.chr1.nic@KIAA0319L	transcript3034.chr1.nic	protein_coding	35557207,35554350,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35434105	35557420,35554519,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081	Gene ID= ENSG00000142687.17 TPM= 3.21 Transcript Type= NA
chr1	35434105	35557420	35434105	35557420	-	transcript3035.chr1.nnic@KIAA0319L	transcript3035.chr1.nnic	protein_coding	35557207,35554350,35506612,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35434105	35557420,35554519,35507135,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081	Gene ID= ENSG00000142687.17 TPM= 2.25 Transcript Type= NA
chr1	35451635	35557420	35451635	35557420	-	transcript3042.chr1.nic@KIAA0319L	transcript3042.chr1.nic	protein_coding	35557207,35554350,35506612,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451635	35557420,35554519,35507135,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776	Gene ID= ENSG00000142687.17 TPM= 2.9 Transcript Type= NA
chr1	35433490	35557413	35433490	35557413	-	ENST00000325722.7@KIAA0319L	ENST00000325722.7	protein_coding	35557207,35554350,35506612,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35433490	35557413,35554519,35507135,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081	Gene ID= ENSG00000142687.17 TPM= 10.94 Transcript Type= protein_coding
chr1	35557780	35566772	35557780	35566772	+	transcript3045.chr1.nnic@NCDN	transcript3045.chr1.nnic	protein_coding	35557780,35558156,35559107,35560326,35562392,35563202,35563767,35565227	35557883,35558368,35559247,35561294,35562633,35563426,35563909,35566772	Gene ID= ENSG00000020129.15 TPM= 4.25 Transcript Type= NA
chr1	35557780	35566772	35557780	35566772	+	transcript3046.chr1.nic@NCDN	transcript3046.chr1.nic	protein_coding	35557780,35558156,35559107,35560326,35562392,35563202,35563767,35565227	35557883,35558685,35559247,35561294,35562633,35563426,35563909,35566772	Gene ID= ENSG00000020129.15 TPM= 5.21 Transcript Type= NA
chr1	35557598	35566772	35557598	35566772	+	transcript3047.chr1.nic@NCDN	transcript3047.chr1.nic	protein_coding	35557598,35559107,35560326,35562392,35563202,35563767,35565227	35558685,35559247,35561294,35562633,35563426,35563909,35566772	Gene ID= ENSG00000020129.15 TPM= 5.21 Transcript Type= NA
chr1	35557792	35566779	35557792	35566779	+	ENST00000356090.8@NCDN	ENST00000356090.8	protein_coding	35557792,35558156,35559107,35560326,35562392,35563202,35563767,35565227	35557883,35558223,35559247,35561294,35562633,35563426,35563909,35566779	Gene ID= ENSG00000020129.15 TPM= 11.97 Transcript Type= protein_coding
chr1	35557808	35566773	35557808	35566773	+	ENST00000373243.6@NCDN	ENST00000373243.6	protein_coding	35557808,35559107,35560326,35562392,35563202,35563767,35565227	35558223,35559247,35561294,35562633,35563426,35563909,35566773	Gene ID= ENSG00000020129.15 TPM= 9.07 Transcript Type= protein_coding
chr1	35601820	35641583	35601820	35641583	-	transcript3054.chr1.nnic@PSMB2	transcript3054.chr1.nnic	protein_coding	35641342,35636310,35631274,35609246,35605233,35602838,35601820	35641583,35636432,35631344,35609408,35605282,35603374,35602272	Gene ID= ENSG00000126067.11 TPM= 4.83 Transcript Type= NA
chr1	35601584	35641844	35601584	35641844	-	ENST00000373237.3@PSMB2	ENST00000373237.3	protein_coding	35641342,35636310,35631274,35609246,35605233,35601584	35641844,35636432,35631344,35609408,35605282,35603374	Gene ID= ENSG00000126067.11 TPM= 16.41 Transcript Type= protein_coding
chr1	35603138	35641519	35603138	35641519	-	transcript3062.chr1.nnic@PSMB2	transcript3062.chr1.nnic	protein_coding	35641417,35636310,35631274,35609246,35605233,35603138	35641519,35636432,35631344,35609408,35605282,35603374	Gene ID= ENSG00000126067.11 TPM= 5.79 Transcript Type= NA
chr1	35713875	35719472	35713875	35719472	-	ENST00000270815.4@C1orf216	ENST00000270815.4	protein_coding	35718707,35713875	35719472,35716326	Gene ID= ENSG00000142686.7 TPM= 84.95 Transcript Type= protein_coding
chr1	35808172	35857890	35808172	35857890	+	ENST00000373210.3@AGO4	ENST00000373210.3	protein_coding	35808172,35816882,35822862,35825313,35825679,35825926,35826748,35831427,35831812,35832057,35832437,35833990,35835834,35841165,35841616,35850157,35850854,35853497	35808435,35817047,35822982,35825494,35825815,35826060,35826835,35831574,35831931,35832185,35832570,35834174,35835993,35841480,35841750,35850258,35851053,35857890	Gene ID= ENSG00000134698.10 TPM= 3.86 Transcript Type= protein_coding
chr1	35921003	35924289	35921003	35924289	+	transcript3081.chr1.nnic@NA	transcript3081.chr1.nnic	NA	35921003	35924289	Gene ID= novel_gene_chr1_3082 TPM= 9.65 Transcript Type= NA
chr1	35928106	35929610	35928106	35929610	+	transcript3083.chr1.nnic@NA	transcript3083.chr1.nnic	NA	35928106	35929610	Gene ID= novel_gene_chr1_3084 TPM= 1.93 Transcript Type= NA
chr1	35930696	36056080	35930696	36056080	+	transcript3085.chr1.nic@AGO3	transcript3085.chr1.nic	protein_coding	35930696,35931229,35945692,35966955,35972024,35973375,36004341,36008690,36008897,36009475,36013630,36013915,36027114,36034174,36036177,36039790,36040307,36043447,36054946,36055637	35930798,35931445,35945863,35967075,35972232,35973511,36004475,36008777,36009044,36009594,36013752,36014048,36027298,36034333,36036267,36039984,36040441,36043548,36055145,36056080	Gene ID= ENSG00000126070.19 TPM= 1.93 Transcript Type= NA
chr1	35931078	36072500	35931078	36072500	+	ENST00000373191.8@AGO3	ENST00000373191.8	protein_coding	35931078,35945692,35966955,35972024,35973375,36004341,36008690,36008897,36009475,36013630,36013915,36027114,36034174,36036177,36039790,36040307,36043447,36054946,36055637	35931445,35945863,35967075,35972232,35973511,36004475,36008777,36009044,36009594,36013752,36014048,36027298,36034333,36036267,36039984,36040441,36043548,36055145,36072500	Gene ID= ENSG00000126070.19 TPM= 3.86 Transcript Type= protein_coding
chr1	36088875	36093932	36088875	36093932	+	ENST00000373178.4@ADPRHL2	ENST00000373178.4	protein_coding	36088875,36091244,36091618,36091910,36092422,36093097	36089115,36091340,36091825,36092094,36092522,36093932	Gene ID= ENSG00000116863.10 TPM= 111.98 Transcript Type= protein_coding
chr1	36136581	36149504	36136581	36149504	-	transcript3109.chr1.nic@TRAPPC3	transcript3109.chr1.nic	protein_coding	36149337,36140069,36139720,36136581	36149504,36140166,36139819,36137978	Gene ID= ENSG00000054116.11 TPM= 1.93 Transcript Type= NA
chr1	36136572	36149469	36136572	36149469	-	ENST00000373166.7@TRAPPC3	ENST00000373166.7	protein_coding	36149337,36140069,36139720,36137796,36136572	36149469,36140166,36139819,36137978,36137322	Gene ID= ENSG00000054116.11 TPM= 3.86 Transcript Type= protein_coding
chr1	36156139	36180849	36156139	36180849	+	transcript3111.chr1.nic@MAP7D1	transcript3111.chr1.nic	protein_coding	36156139,36170971,36171513,36172464,36173364,36174898,36176199,36176418,36176697,36177873,36178446,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36175008,36176321,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 19.4 Transcript Type= NA
chr1	36156139	36180849	36156139	36180849	+	transcript3117.chr1.nic@MAP7D1	transcript3117.chr1.nic	protein_coding	36156139,36170971,36171513,36172464,36173364,36174898,36176199,36176697,36177873,36178446,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36175008,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 16.84 Transcript Type= NA
chr1	36156139	36180849	36156139	36180849	+	transcript3118.chr1.nic@MAP7D1	transcript3118.chr1.nic	protein_coding	36156139,36170971,36171513,36172464,36173364,36176199,36176418,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36176321,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 21.74 Transcript Type= NA
chr1	36155965	36180849	36155965	36180849	+	ENST00000316156.8@MAP7D1	ENST00000316156.8	protein_coding	36155965,36170971,36171513,36172464,36173364,36176199,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 27.37 Transcript Type= protein_coding
chr1	36156202	36180840	36156202	36180840	+	ENST00000373151.6@MAP7D1	ENST00000373151.6	protein_coding	36156202,36170971,36171513,36172464,36173364,36174898,36176199,36176697,36177873,36178419,36178685,36178921,36179262,36179512,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36175008,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180840	Gene ID= ENSG00000116871.15 TPM= 65.03 Transcript Type= protein_coding
chr1	36156198	36180849	36156198	36180849	+	ENST00000373150.8@MAP7D1	ENST00000373150.8	protein_coding	36156198,36170971,36171513,36172464,36173364,36174898,36176199,36176418,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36175008,36176321,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 109.44 Transcript Type= protein_coding
chr1	36223321	36224617	36223321	36224617	-	transcript3161.chr1.nnic@NA	transcript3161.chr1.nnic	NA	36223321	36224617	Gene ID= novel_gene_chr1_3162 TPM= 1.93 Transcript Type= NA
chr1	36224397	36294169	36224397	36294169	+	transcript3138.chr1.nnic@THRAP3	transcript3138.chr1.nnic	protein_coding	36224397,36259382,36282533,36286368,36287477,36289060,36291374,36292598,36293851,36294050	36224505,36259484,36282700,36287270,36287871,36289764,36291546,36292709,36293935,36294169	Gene ID= ENSG00000054118.13 TPM= 3.01 Transcript Type= NA
chr1	36224427	36289133	36224427	36289133	+	transcript3144.chr1.nnic@THRAP3	transcript3144.chr1.nnic	protein_coding	36224427,36225412,36259382,36282533,36286368,36287477,36289060	36224505,36225463,36259484,36282700,36287270,36287871,36289133	Gene ID= ENSG00000054118.13 TPM= 4.79 Transcript Type= NA
chr1	36224427	36289133	36224427	36289133	+	transcript3149.chr1.nic@THRAP3	transcript3149.chr1.nic	protein_coding	36224427,36225412,36259382,36282533,36286368,36289060	36224505,36225463,36259484,36282700,36287270,36289133	Gene ID= ENSG00000054118.13 TPM= 10.73 Transcript Type= NA
chr1	36224432	36304148	36224432	36304148	+	ENST00000469141.6@THRAP3	ENST00000469141.6	protein_coding	36224432,36224971,36259382,36282533,36286368,36289060,36291374,36292598,36293851,36296583,36300886,36301553,36303796	36224505,36225102,36259484,36282700,36287270,36289764,36291546,36292709,36293935,36296770,36301084,36301696,36304148	Gene ID= ENSG00000054118.13 TPM= 9.29 Transcript Type= protein_coding
chr1	36224397	36289133	36224397	36289133	+	transcript3153.chr1.nic@THRAP3	transcript3153.chr1.nic	protein_coding	36224397,36259382,36282533,36286368,36289060	36224505,36259484,36282700,36287270,36289133	Gene ID= ENSG00000054118.13 TPM= 77.34 Transcript Type= NA
chr1	36224416	36305357	36224416	36305357	+	ENST00000354618.9@THRAP3	ENST00000354618.9	protein_coding	36224416,36259382,36282533,36286368,36289060,36291374,36292598,36293851,36296583,36300886,36301553,36303796	36224505,36259484,36282700,36287270,36289764,36291546,36292709,36293935,36296770,36301084,36301696,36305357	Gene ID= ENSG00000054118.13 TPM= 175.32 Transcript Type= protein_coding
chr1	36293030	36294699	36293030	36294699	-	transcript3159.chr1.nnic@NA	transcript3159.chr1.nnic	NA	36293030	36294699	Gene ID= novel_gene_chr1_3160 TPM= 4.83 Transcript Type= NA
chr1	36339624	36385927	36339624	36385927	-	transcript3170.chr1.nic@STK40	transcript3170.chr1.nic	protein_coding	36385723,36367852,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624	36385927,36368084,36361340,36358837,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 26.5 Transcript Type= NA
chr1	36341494	36385915	36341494	36385915	-	transcript3181.chr1.nnic@STK40	transcript3181.chr1.nnic	protein_coding	36385723,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36341494	36385915,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 3.09 Transcript Type= NA
chr1	36339624	36385884	36339624	36385884	-	ENST00000373129.7@STK40	ENST00000373129.7	protein_coding	36385723,36367848,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624	36385884,36368084,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 72.83 Transcript Type= protein_coding
chr1	36339624	36385896	36339624	36385896	-	ENST00000373132.3@STK40	ENST00000373132.3	protein_coding	36385723,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624	36385896,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 47.73 Transcript Type= protein_coding
chr1	36393430	36397892	36393430	36397892	-	ENST00000315732.2@LSM10	ENST00000315732.2	protein_coding	36397767,36393430	36397892,36394153	Gene ID= ENSG00000181817.5 TPM= 60.81 Transcript Type= protein_coding
chr1	36417906	36450451	36417906	36450451	-	ENST00000235532.9@OSCP1	ENST00000235532.9	protein_coding	36450258,36438756,36432422,36431802,36423363,36422768,36422150,36420476,36418991,36417906	36450451,36438910,36432589,36431882,36423466,36422896,36422219,36420615,36419054,36418255	Gene ID= ENSG00000116885.18 TPM= 4.83 Transcript Type= protein_coding
chr1	36455718	36464437	36455718	36464437	-	ENST00000373116.5@MRPS15	ENST00000373116.5	protein_coding	36464146,36463806,36462088,36461264,36460692,36457923,36456187,36455718	36464437,36463850,36462163,36461312,36460776,36457981,36456378,36455925	Gene ID= ENSG00000116898.11 TPM= 108.11 Transcript Type= protein_coding
chr1	37097875	37101081	37097875	37101081	-	transcript3214.chr1.nnic@NA	transcript3214.chr1.nnic	NA	37097875	37101081	Gene ID= novel_gene_chr1_3215 TPM= 1.93 Transcript Type= NA
chr1	37102533	37152696	37102533	37152696	-	transcript3206.chr1.nnic@NA	transcript3206.chr1.nnic	NA	37152432,37149262,37102533	37152696,37149424,37103878	Gene ID= novel_gene_chr1_3207 TPM= 10.62 Transcript Type= NA
chr1	37454876	37474422	37454876	37474422	-	transcript3221.chr1.nnic@LINC01137	transcript3221.chr1.nnic	antisense_RNA	37474144,37454876	37474422,37455912	Gene ID= ENSG00000233621.1 TPM= 1.93 Transcript Type= NA
chr1	37472995	37476729	37472995	37476729	-	transcript3222.chr1.nnic@LINC01137	transcript3222.chr1.nnic	antisense_RNA	37476166,37472995	37476729,37476067	Gene ID= ENSG00000233621.1 TPM= 1.93 Transcript Type= NA
chr1	37454879	37474411	37454879	37474411	-	ENST00000424989.1@LINC01137	ENST00000424989.1	antisense_RNA	37474144,37456367,37454879	37474411,37456459,37455912	Gene ID= ENSG00000233621.1 TPM= 12.55 Transcript Type= antisense_RNA
chr1	37474552	37484379	37474552	37484379	+	ENST00000373087.6@ZC3H12A	ENST00000373087.6	protein_coding	37474552,37475459,37480290,37481601,37482434,37482737	37474629,37475939,37480429,37481835,37482540,37484379	Gene ID= ENSG00000163874.10 TPM= 7.72 Transcript Type= protein_coding
chr1	37474580	37484360	37474580	37484360	+	ENST00000640233.1@ZC3H12A	ENST00000640233.1	protein_coding	37474580,37475459,37480290,37481601,37482350,37482737	37474629,37475939,37480429,37481835,37482540,37484360	Gene ID= ENSG00000163874.10 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr1	37493311	37514807	37493311	37514807	-	transcript3236.chr1.nnic@MEAF6	transcript3236.chr1.nnic	protein_coding	37514657,37513423,37509455,37509278,37501804,37496883,37495885,37493311	37514807,37513538,37509542,37509323,37501996,37496942,37495918,37494107	Gene ID= ENSG00000163875.15 TPM= 1.93 Transcript Type= NA
chr1	37492575	37514763	37492575	37514763	-	ENST00000373075.6@MEAF6	ENST00000373075.6	protein_coding	37514657,37513423,37509455,37509278,37501804,37496707,37495885,37492575	37514763,37513538,37509542,37509323,37501996,37496736,37495918,37494107	Gene ID= ENSG00000163875.15 TPM= 15.44 Transcript Type= protein_coding
chr1	37493178	37514774	37493178	37514774	-	ENST00000296214.9@MEAF6	ENST00000296214.9	protein_coding	37514657,37513423,37509455,37509278,37501804,37495885,37493178	37514774,37513538,37509542,37509323,37501996,37495918,37494107	Gene ID= ENSG00000163875.15 TPM= 9.65 Transcript Type= protein_coding
chr1	37493335	37514756	37493335	37514756	-	ENST00000475828.5@MEAF6	ENST00000475828.5	protein_coding	37514657,37513423,37509455,37509278,37501804,37496547,37495885,37493335	37514756,37513538,37509542,37509323,37501996,37496604,37495918,37494107	Gene ID= ENSG00000163875.15 TPM= 4.83 Transcript Type= processed_transcript
chr1	37556919	37566857	37556919	37566857	+	ENST00000296218.7@DNALI1	ENST00000296218.7	protein_coding	37556919,37557603,37559327,37561557,37562081,37565026	37557075,37557748,37559496,37561735,37562245,37566857	Gene ID= ENSG00000163879.10 TPM= 1.93 Transcript Type= protein_coding
chr1	37566816	37595921	37566816	37595921	-	ENST00000373062.7@GNL2	ENST00000373062.7	protein_coding	37595759,37593762,37592712,37590706,37587311,37583867,37582778,37582223,37576428,37575595,37574665,37574343,37568851,37568275,37567673,37566816	37595921,37593846,37592806,37590845,37587495,37583933,37582936,37582336,37576556,37575699,37574823,37574456,37569302,37568357,37567764,37567007	Gene ID= ENSG00000134697.12 TPM= 53.09 Transcript Type= protein_coding
chr1	37681570	37690529	37681570	37690529	-	transcript3247.chr1.nic@C1orf109	transcript3247.chr1.nic	protein_coding	37690002,37689606,37686273,37683319,37681570	37690529,37689883,37686452,37683437,37683160	Gene ID= ENSG00000116922.14 TPM= 8.69 Transcript Type= NA
chr1	37681570	37690520	37681570	37690520	-	ENST00000358011.8@C1orf109	ENST00000358011.8	protein_coding	37690334,37689606,37686273,37683319,37681570	37690520,37689883,37686452,37683437,37683160	Gene ID= ENSG00000116922.14 TPM= 6.76 Transcript Type= protein_coding
chr1	37793802	37801133	37793802	37801133	+	ENST00000373045.10@MANEAL	ENST00000373045.10	protein_coding	37793802,37795737,37796744,37799567	37794732,37795846,37796820,37801133	Gene ID= ENSG00000185090.14 TPM= 1.93 Transcript Type= protein_coding
chr1	37793883	37801133	37793883	37801133	+	ENST00000397631.7@MANEAL	ENST00000397631.7	protein_coding	37793883,37795737,37796744,37799844	37794732,37795846,37796820,37801133	Gene ID= ENSG00000185090.14 TPM= 2.9 Transcript Type= protein_coding
chr1	37802944	37808185	37802944	37808185	-	ENST00000373044.2@YRDC	ENST00000373044.2	protein_coding	37807792,37807101,37806857,37804302,37802944	37808185,37807215,37806976,37804444,37803997	Gene ID= ENSG00000196449.3 TPM= 50.2 Transcript Type= protein_coding
chr1	37808146	37809454	37808146	37809454	+	ENST00000373042.4@C1orf122	ENST00000373042.4	protein_coding	37808146,37808531,37808978	37808439,37808732,37809454	Gene ID= ENSG00000197982.13 TPM= 31.86 Transcript Type= protein_coding
chr1	37806979	37809452	37806979	37809452	+	ENST00000373043.1@C1orf122	ENST00000373043.1	protein_coding	37806979,37808978	37808732,37809452	Gene ID= ENSG00000197982.13 TPM= 4.83 Transcript Type= protein_coding
chr1	37807747	37809449	37807747	37809449	+	ENST00000468084.1@C1orf122	ENST00000468084.1	protein_coding	37807747,37808531,37808978	37808306,37808732,37809449	Gene ID= ENSG00000197982.13 TPM= 26.06 Transcript Type= protein_coding
chr1	37809567	37859620	37809567	37859620	-	ENST00000373036.4@MTF1	ENST00000373036.4	protein_coding	37859531,37857251,37839920,37838625,37835671,37835079,37832245,37823710,37822121,37817419,37809567	37859620,37857709,37840158,37838756,37835744,37835215,37832322,37823812,37822716,37817482,37815566	Gene ID= ENSG00000188786.9 TPM= 2.9 Transcript Type= protein_coding
chr1	37993747	37995738	37993747	37995738	+	transcript3328.chr1.nnic@NA	transcript3328.chr1.nnic	NA	37993747	37995738	Gene ID= novel_gene_chr1_3329 TPM= 55.99 Transcript Type= NA
chr1	37996770	38005505	37996770	38005505	-	ENST00000373016.3@FHL3	ENST00000373016.3	protein_coding	38005357,37999257,37998974,37997963,37997684,37996770	38005505,37999432,37999148,37998132,37997870,37997559	Gene ID= ENSG00000183386.9 TPM= 722.51 Transcript Type= protein_coding
chr1	37996770	38005502	37996770	38005502	-	ENST00000485803.5@FHL3	ENST00000485803.5	protein_coding	38005357,37998974,37997963,37997684,37996770	38005502,37999148,37998132,37997870,37997559	Gene ID= ENSG00000183386.9 TPM= 88.93 Transcript Type= processed_transcript
chr1	37997345	38005606	37997345	38005606	-	ENST00000477194.5@FHL3	ENST00000477194.5	protein_coding	38005439,37999257,37998974,37997963,37997684,37997345	38005606,37999432,37999148,37998132,37997870,37997559	Gene ID= ENSG00000183386.9 TPM= 8.54 Transcript Type= processed_transcript
chr1	38016130	38024824	38016130	38024824	+	transcript3349.chr1.nic@UTP11	transcript3349.chr1.nic	protein_coding	38016130,38017668,38018464,38019059,38019253,38022699,38023545	38016420,38017770,38018577,38019152,38019383,38022809,38024824	Gene ID= ENSG00000183520.11 TPM= 11.78 Transcript Type= NA
chr1	38012742	38024824	38012742	38024824	+	ENST00000373014.4@UTP11	ENST00000373014.4	protein_coding	38012742,38016359,38017668,38018464,38019059,38019253,38022699,38023545	38012865,38016420,38017770,38018577,38019152,38019383,38022809,38024824	Gene ID= ENSG00000183520.11 TPM= 152.71 Transcript Type= protein_coding
chr1	38838198	38859823	38838198	38859823	-	ENST00000373001.3@RRAGC	ENST00000373001.3	protein_coding	38859410,38856879,38855708,38852374,38851615,38845939,38838198	38859823,38857082,38855907,38852488,38851757,38846087,38839704	Gene ID= ENSG00000116954.7 TPM= 7.72 Transcript Type= protein_coding
chr1	38862964	38874105	38862964	38874105	-	ENST00000397572.4@MYCBP	ENST00000397572.4	protein_coding	38873291,38873018,38867562,38866880,38862964	38874105,38873090,38867610,38867009,38864714	Gene ID= ENSG00000214114.8 TPM= 12.55 Transcript Type= protein_coding
chr1	38991223	39006059	38991223	39006059	+	ENST00000432648.7@AKIRIN1	ENST00000432648.7	protein_coding	38991223,38998171,39000972,39003347,39004045	38991600,38998311,39001106,39003418,39006059	Gene ID= ENSG00000174574.15 TPM= 55.02 Transcript Type= protein_coding
chr1	39026318	39034636	39026318	39034636	+	ENST00000372967.3@NDUFS5	ENST00000372967.3	protein_coding	39026318,39028723,39034392	39026398,39028940,39034636	Gene ID= ENSG00000168653.10 TPM= 220.57 Transcript Type= protein_coding
chr1	39026318	39034636	39026318	39034636	+	ENST00000372969.7@NDUFS5	ENST00000372969.7	protein_coding	39026318,39028723,39034392	39026402,39028940,39034636	Gene ID= ENSG00000168653.10 TPM= 69.99 Transcript Type= protein_coding
chr1	39560816	39576790	39560816	39576790	-	transcript3387.chr1.nic@PABPC4	transcript3387.chr1.nic	protein_coding	39576552,39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564423,39563614,39562323,39562073,39561685,39560816	39576790,39576223,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563741,39562416,39562203,39561787,39561122	Gene ID= ENSG00000090621.13 TPM= 5.41 Transcript Type= NA
chr1	39560816	39576751	39560816	39576751	-	ENST00000372856.7@PABPC4	ENST00000372856.7	protein_coding	39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564423,39563614,39562323,39562073,39561685,39560816	39576751,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563741,39562416,39562203,39561787,39561122	Gene ID= ENSG00000090621.13 TPM= 65.26 Transcript Type= protein_coding
chr1	39560816	39576744	39560816	39576744	-	ENST00000372857.7@PABPC4	ENST00000372857.7	protein_coding	39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564471,39563836,39563614,39562323,39562073,39561685,39560816	39576744,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563922,39563741,39562416,39562203,39561787,39561122	Gene ID= ENSG00000090621.13 TPM= 9.27 Transcript Type= protein_coding
chr1	39624153	39639945	39624153	39639945	-	ENST00000372852.3@HEYL	ENST00000372852.3	protein_coding	39639546,39632649,39631496,39630227,39624153	39639945,39632715,39631579,39630308,39627180	Gene ID= ENSG00000163909.7 TPM= 10.62 Transcript Type= protein_coding
chr1	39651229	39672139	39651229	39672139	-	transcript3409.chr1.nnic@NT5C1A	transcript3409.chr1.nnic	protein_coding	39671904,39666069,39665521,39663312,39661079,39655239,39651229	39672139,39666236,39665650,39663434,39661263,39659486,39651776	Gene ID= ENSG00000116981.3 TPM= 7.24 Transcript Type= NA
chr1	39653086	39655014	39653086	39655014	+	transcript3427.chr1.nnic@NA	transcript3427.chr1.nnic	NA	39653086	39655014	Gene ID= novel_gene_chr1_3428 TPM= 12.55 Transcript Type= NA
chr1	39678648	39691485	39678648	39691485	-	ENST00000617690.2@HPCAL4	ENST00000617690.2	protein_coding	39691306,39691065,39684442,39683937,39678648	39691485,39691170,39684611,39684152,39682733	Gene ID= ENSG00000116983.12 TPM= 1.45 Transcript Type= protein_coding
chr1	39678648	39691689	39678648	39691689	-	ENST00000372844.7@HPCAL4	ENST00000372844.7	protein_coding	39691306,39684442,39683937,39678648	39691689,39684611,39684152,39682733	Gene ID= ENSG00000116983.12 TPM= 6.27 Transcript Type= protein_coding
chr1	39738861	39763914	39738861	39763914	+	transcript3437.chr1.nic@PPIE	transcript3437.chr1.nic	protein_coding	39738861,39740165,39741366,39741895,39743216,39743824,39745414,39748903,39752910,39763689	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39763914	Gene ID= ENSG00000084072.16 TPM= 3.86 Transcript Type= NA
chr1	39738861	39753707	39738861	39753707	+	transcript3439.chr1.nic@PPIE	transcript3439.chr1.nic	protein_coding	39738861,39740165,39741366,39741895,39743216,39743824,39748903,39752910,39753287	39738931,39740263,39741409,39741921,39743297,39743924,39749088,39753052,39753707	Gene ID= ENSG00000084072.16 TPM= 5.79 Transcript Type= NA
chr1	39738885	39763914	39738885	39763914	+	ENST00000356511.6@PPIE	ENST00000356511.6	protein_coding	39738885,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39763689	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39763914	Gene ID= ENSG00000084072.16 TPM= 8.69 Transcript Type= protein_coding
chr1	39738882	39753707	39738882	39753707	+	ENST00000324379.9@PPIE	ENST00000324379.9	protein_coding	39738882,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39753287	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39753707	Gene ID= ENSG00000084072.16 TPM= 55.99 Transcript Type= protein_coding
chr1	39738908	39753716	39738908	39753716	+	ENST00000475350.5@PPIE	ENST00000475350.5	protein_coding	39738908,39740165,39741366,39741895,39743216,39743824,39745414,39748903,39752910,39753287	39738923,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39753716	Gene ID= ENSG00000084072.16 TPM= 14.48 Transcript Type= nonsense_mediated_decay
chr1	39738901	39763914	39738901	39763914	+	ENST00000372830.5@PPIE	ENST00000372830.5	protein_coding	39738901,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39762517,39763689	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39762651,39763914	Gene ID= ENSG00000084072.16 TPM= 6.76 Transcript Type= protein_coding
chr1	39841051	39883506	39841051	39883506	-	ENST00000316891.9@TRIT1	ENST00000316891.9	protein_coding	39883318,39857277,39853970,39852731,39850119,39847986,39847548,39847220,39844531,39844101,39841051	39883506,39857417,39854068,39852876,39850261,39848097,39847660,39847297,39844640,39844218,39841913	Gene ID= ENSG00000043514.15 TPM= 1.93 Transcript Type= protein_coding
chr1	40040749	40072649	40040749	40072649	+	transcript3454.chr1.nic@CAP1	transcript3454.chr1.nic	protein_coding	40040749,40059337,40060067,40061735,40064227,40064474,40066215,40067540,40069690,40070159,40070430,40071450	40040801,40059458,40060170,40061812,40064370,40064559,40066320,40067717,40069874,40070282,40070979,40072649	Gene ID= ENSG00000131236.16 TPM= 2.9 Transcript Type= NA
chr1	40040761	40072271	40040761	40072271	+	ENST00000372805.7@CAP1	ENST00000372805.7	protein_coding	40040761,40059337,40060067,40061735,40064227,40064474,40066215,40067540,40069690,40070159,40070430,40070836,40071450	40040801,40059458,40060170,40061812,40064370,40064559,40066320,40067717,40069874,40070282,40070512,40070979,40072271	Gene ID= ENSG00000131236.16 TPM= 40.54 Transcript Type= protein_coding
chr1	40071461	40097727	40071461	40097727	-	ENST00000642050.1@PPT1	ENST00000642050.1	protein_coding	40097115,40092398,40092045,40091329,40089410,40080397,40078560,40076842,40071461	40097727,40092507,40092172,40091399,40089512,40080487,40078658,40076913,40074183	Gene ID= ENSG00000131238.17 TPM= 34.75 Transcript Type= protein_coding
chr1	40072726	40097252	40072726	40097252	-	ENST00000433473.8@PPT1	ENST00000433473.8	protein_coding	40097115,40092398,40092045,40091329,40089410,40080397,40078560,40076842,40072726	40097252,40092504,40092172,40091399,40089512,40080487,40078658,40076913,40074183	Gene ID= ENSG00000131238.17 TPM= 34.75 Transcript Type= protein_coding
chr1	40161373	40240921	40161373	40240921	+	ENST00000372771.4@RLF	ENST00000372771.4	protein_coding	40161373,40189055,40190772,40195632,40202412,40222574,40231517,40235792	40161636,40189209,40190853,40195764,40202614,40222710,40231658,40240921	Gene ID= ENSG00000117000.8 TPM= 8.69 Transcript Type= protein_coding
chr1	40256427	40257967	40256427	40257967	-	ENST00000567508.1@AL050341.2	ENST00000567508.1	antisense_RNA	40256427	40257967	Gene ID= ENSG00000259943.1 TPM= 11.58 Transcript Type= antisense_RNA
chr1	40258200	40294184	40258200	40294184	+	transcript3469.chr1.nnic@ZMPSTE24	transcript3469.chr1.nnic	protein_coding	40258200,40260839,40262834,40267786,40268419,40269975,40271894,40281343,40285925,40290854,40292445	40258394,40260985,40262983,40267872,40268535,40270127,40272035,40281527,40286029,40290997,40294184	Gene ID= ENSG00000084073.8 TPM= 1.93 Transcript Type= NA
chr1	40258210	40294171	40258210	40294171	+	transcript3476.chr1.nnic@ZMPSTE24	transcript3476.chr1.nnic	protein_coding	40258210,40260839,40267786,40268419,40269975,40271894,40281343,40285925,40292445	40258394,40260985,40267872,40268535,40270127,40272035,40281527,40286029,40294171	Gene ID= ENSG00000084073.8 TPM= 1.93 Transcript Type= NA
chr1	40258107	40294184	40258107	40294184	+	ENST00000372759.3@ZMPSTE24	ENST00000372759.3	protein_coding	40258107,40260839,40267786,40268419,40269975,40271894,40281343,40285925,40290854,40292445	40258394,40260985,40267872,40268535,40270127,40272035,40281527,40286029,40290997,40294184	Gene ID= ENSG00000084073.8 TPM= 47.3 Transcript Type= protein_coding
chr1	40373775	40423324	40373775	40423324	+	transcript3484.chr1.nnic@SMAP2	transcript3484.chr1.nnic	protein_coding	40373775,40413016,40414159,40415272,40416176,40416780,40421976	40374223,40413102,40414240,40415381,40416341,40417096,40423324	Gene ID= ENSG00000084070.11 TPM= 5.79 Transcript Type= NA
chr1	40373697	40423326	40373697	40423326	+	ENST00000372718.7@SMAP2	ENST00000372718.7	protein_coding	40373697,40406736,40408653,40409757,40413016,40414159,40415272,40416176,40416780,40421976	40374223,40406869,40408738,40409835,40413102,40414240,40415381,40416341,40417096,40423326	Gene ID= ENSG00000084070.11 TPM= 25.1 Transcript Type= protein_coding
chr1	40691598	40771603	40691598	40771603	+	transcript3496.chr1.nic@NFYC	transcript3496.chr1.nic	protein_coding	40691598,40738836,40747534,40749573,40753151,40758121,40762888,40763363,40766596,40769356,40770709	40691867,40738948,40747605,40749686,40753246,40758294,40763046,40763489,40766703,40769415,40771603	Gene ID= ENSG00000066136.20 TPM= 6.03 Transcript Type= NA
chr1	40691598	40771603	40691598	40771603	+	transcript3511.chr1.nnic@NFYC	transcript3511.chr1.nnic	protein_coding	40691598,40738836,40747534,40749573,40753151,40758121,40762888,40769356,40770709	40691867,40738948,40747605,40749686,40753246,40758294,40763046,40769415,40771603	Gene ID= ENSG00000066136.20 TPM= 6.03 Transcript Type= NA
chr1	40861051	40862366	40861051	40862366	-	ENST00000372638.3@CITED4	ENST00000372638.3	protein_coding	40861051	40862366	Gene ID= ENSG00000179862.6 TPM= 131.28 Transcript Type= protein_coding
chr1	40979646	41012565	40979646	41012565	+	transcript3518.chr1.nnic@CTPS1	transcript3518.chr1.nnic	protein_coding	40979646,40980886,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41007449,41008659,41008794,41009445,41010161,41011658	40979829,40981043,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41007545,41008714,41008890,41009589,41010254,41012565	Gene ID= ENSG00000171793.13 TPM= 13.51 Transcript Type= NA
chr1	40979335	41012565	40979335	41012565	+	ENST00000372621.8@CTPS1	ENST00000372621.8	protein_coding	40979335,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41007449,41008659,41008794,41009445,41010161,41011658	40979829,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41007545,41008714,41008890,41009589,41010254,41012565	Gene ID= ENSG00000171793.13 TPM= 36.68 Transcript Type= protein_coding
chr1	40979999	41012565	40979999	41012565	+	transcript3525.chr1.nic@CTPS1	transcript3525.chr1.nic	protein_coding	40979999,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41007449,41008659,41008794,41009445,41010161,41011658	40980561,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41007545,41008714,41008890,41009589,41010254,41012565	Gene ID= ENSG00000171793.13 TPM= 5.79 Transcript Type= NA
chr1	41027202	41242182	41027202	41242182	-	transcript3532.chr1.nic@SCMH1	transcript3532.chr1.nic	protein_coding	41242059,41186121,41161364,41160875,41159725,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41033983,41028584,41027202	41242182,41186250,41161432,41160898,41159933,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41034048,41028726,41028319	Gene ID= ENSG00000010803.16 TPM= 19.31 Transcript Type= NA
chr1	41027202	41045903	41027202	41045903	-	transcript3537.chr1.nic@SCMH1	transcript3537.chr1.nic	protein_coding	41045713,41037362,41028584,41027202	41045903,41037541,41028726,41028319	Gene ID= ENSG00000010803.16 TPM= 1.93 Transcript Type= NA
chr1	41027202	41242116	41027202	41242116	-	ENST00000372597.5@SCMH1	ENST00000372597.5	protein_coding	41242059,41186121,41161364,41160875,41159725,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41028584,41027202	41242116,41186250,41161432,41160898,41159933,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41028726,41028319	Gene ID= ENSG00000010803.16 TPM= 5.79 Transcript Type= protein_coding
chr1	41847191	42035925	41847191	42035925	-	ENST00000489103.5@HIVEP3	ENST00000489103.5	protein_coding	42035807,41918413,41848871,41847191	42035925,41918524,41849089,41848445	Gene ID= ENSG00000127124.14 TPM= 1.93 Transcript Type= processed_transcript
chr1	42176545	42335232	42176545	42335232	-	ENST00000361346.5@FOXJ3	ENST00000361346.5	protein_coding	42335059,42311050,42278348,42265115,42227883,42205762,42199102,42194890,42191303,42189303,42188737,42181917,42176545	42335232,42311110,42278672,42265189,42227966,42205863,42199230,42195064,42191719,42189404,42188928,42182024,42179825	Gene ID= ENSG00000198815.8 TPM= 4.83 Transcript Type= protein_coding
chr1	42176545	42335215	42176545	42335215	-	ENST00000361776.5@FOXJ3	ENST00000361776.5	protein_coding	42335059,42311050,42278348,42265115,42227883,42199102,42194890,42191303,42189303,42188737,42181917,42176545	42335215,42311110,42278672,42265189,42227966,42199230,42195064,42191719,42189404,42188928,42182024,42179825	Gene ID= ENSG00000198815.8 TPM= 8.69 Transcript Type= protein_coding
chr1	42380806	42422578	42380806	42422578	+	ENST00000431473.3@RIMKLA	ENST00000431473.3	protein_coding	42380806,42399404,42404511,42409984,42414484	42381097,42399634,42404597,42410187,42422578	Gene ID= ENSG00000177181.14 TPM= 1.93 Transcript Type= protein_coding
chr1	42456559	42460398	42456559	42460398	+	transcript3552.chr1.nic@PPCS	transcript3552.chr1.nic	protein_coding	42456559,42457247,42459603	42456628,42457567,42460398	Gene ID= ENSG00000127125.8 TPM= 4.18 Transcript Type= NA
chr1	42456561	42460414	42456561	42460414	+	ENST00000372556.3@PPCS	ENST00000372556.3	protein_coding	42456561,42457247,42459603	42456628,42457350,42460414	Gene ID= ENSG00000127125.8 TPM= 28.8 Transcript Type= protein_coding
chr1	42456559	42460414	42456559	42460414	+	ENST00000372561.3@PPCS	ENST00000372561.3	protein_coding	42456559,42457247,42459603	42457073,42457350,42460414	Gene ID= ENSG00000127125.8 TPM= 26.86 Transcript Type= protein_coding
chr1	42658425	42676758	42658425	42676758	+	ENST00000304979.7@PPIH	ENST00000304979.7	protein_coding	42658425,42658844,42659228,42659522,42660862,42664863,42665980,42666547,42667351,42676584	42658512,42658908,42659251,42659566,42660904,42664955,42666067,42666587,42667440,42676758	Gene ID= ENSG00000171960.10 TPM= 2.9 Transcript Type= protein_coding
chr1	42682395	42702349	42682395	42702349	+	transcript3563.chr1.nic@YBX1	transcript3563.chr1.nic	protein_coding	42682395,42683403,42693490,42696642,42697180,42700781,42701981	42682731,42683466,42693523,42696944,42697262,42701046,42702349	Gene ID= ENSG00000065978.18 TPM= 49.88 Transcript Type= NA
chr1	42682987	42702349	42682987	42702349	+	ENST00000436427.1@YBX1	ENST00000436427.1	protein_coding	42682987,42693490,42696199,42696642,42697180,42700781,42701981	42683365,42693523,42696288,42696944,42697262,42701046,42702349	Gene ID= ENSG00000065978.18 TPM= 18.66 Transcript Type= protein_coding
chr1	42682427	42702349	42682427	42702349	+	ENST00000321358.11@YBX1	ENST00000321358.11	protein_coding	42682427,42683403,42693490,42696199,42696642,42697180,42700781,42701981	42682731,42683466,42693523,42696288,42696944,42697262,42701046,42702349	Gene ID= ENSG00000065978.18 TPM= 219.77 Transcript Type= protein_coding
chr1	42746375	42767023	42746375	42767023	-	ENST00000296388.9@P3H1	ENST00000296388.9	protein_coding	42766507,42762323,42759201,42758852,42757783,42755548,42755165,42754869,42752537,42752274,42750186,42748200,42747723,42747272,42746375	42767023,42762475,42759390,42758983,42757922,42755637,42755217,42754990,42752664,42752369,42750336,42748317,42747798,42747412,42746852	Gene ID= ENSG00000117385.15 TPM= 2.9 Transcript Type= protein_coding
chr1	42767269	42775747	42767269	42775747	+	ENST00000372525.5@C1orf50	ENST00000372525.5	protein_coding	42767269,42767509,42773563,42774737,42775209	42767390,42767624,42773649,42774868,42775747	Gene ID= ENSG00000164008.14 TPM= 3.86 Transcript Type= protein_coding
chr1	42778103	42779390	42778103	42779390	+	transcript3582.chr1.nnic@NA	transcript3582.chr1.nnic	NA	42778103	42779390	Gene ID= novel_gene_chr1_3583 TPM= 1.93 Transcript Type= NA
chr1	42807056	42817252	42807056	42817252	-	ENST00000372521.8@SVBP	ENST00000372521.8	protein_coding	42817190,42816431,42807056	42817252,42816580,42807500	Gene ID= ENSG00000177868.11 TPM= 3.86 Transcript Type= protein_coding
chr1	42817131	42844983	42817131	42844983	+	ENST00000372517.6@ERMAP	ENST00000372517.6	protein_coding	42817131,42825623,42830444,42830768,42835038,42835732,42837158,42838901,42840033,42840152,42840270,42842517	42817253,42825738,42830533,42831115,42835154,42835764,42837190,42838921,42840053,42840178,42840296,42844983	Gene ID= ENSG00000164010.13 TPM= 2.9 Transcript Type= protein_coding
chr1	42846609	42852477	42846609	42852477	+	ENST00000372508.7@ZNF691	ENST00000372508.7	protein_coding	42846609,42850950	42846657,42852477	Gene ID= ENSG00000164011.17 TPM= 10.62 Transcript Type= protein_coding
chr1	42925375	42959173	42925375	42959173	-	ENST00000426263.7@SLC2A1	ENST00000426263.7	protein_coding	42958634,42943226,42931046,42930626,42929873,42929593,42929210,42928932,42927605,42925375	42959173,42943321,42931206,42930866,42930035,42929780,42929314,42929033,42927808,42927241	Gene ID= ENSG00000117394.20 TPM= 1.93 Transcript Type= protein_coding
chr1	43164184	43172260	43164184	43172260	-	ENST00000236051.2@EBNA1BP2	ENST00000236051.2	protein_coding	43172053,43171886,43171479,43170756,43168939,43167160,43166826,43164643,43164184	43172260,43171969,43171651,43170879,43169028,43167235,43166919,43164805,43164493	Gene ID= ENSG00000117395.12 TPM= 12.55 Transcript Type= protein_coding
chr1	43300993	43323108	43300993	43323108	+	ENST00000372476.7@TIE1	ENST00000372476.7	protein_coding	43300993,43304851,43305233,43306840,43307142,43307432,43307796,43308986,43309388,43311671,43311994,43312305,43313135,43313778,43317199,43317564,43317882,43319235,43319459,43321269,43321396,43321616,43322651	43301129,43305165,43305343,43306995,43307273,43307572,43307924,43309131,43309532,43311829,43312131,43312601,43313425,43313968,43317409,43317674,43318072,43319348,43319529,43321309,43321492,43321715,43323108	Gene ID= ENSG00000066056.13 TPM= 12.55 Transcript Type= protein_coding
chr1	43363397	43368018	43363397	43368018	-	ENST00000372458.7@ELOVL1	ENST00000372458.7	protein_coding	43367915,43365564,43365186,43364928,43364738,43364542,43364324,43363397	43368018,43365623,43365376,43365008,43364794,43364647,43364460,43364137	Gene ID= ENSG00000066322.14 TPM= 19.31 Transcript Type= protein_coding
chr1	43363398	43389822	43363398	43389822	-	transcript3608.chr1.nnic@MED8	transcript3608.chr1.nnic	protein_coding	43389759,43388310,43387503,43386858,43386589,43385978,43385046,43365564,43365186,43364928,43364738,43364542,43364324,43363398	43389822,43388428,43387647,43386998,43386670,43386226,43385106,43365623,43365376,43365008,43364794,43364647,43364460,43364137	Gene ID= ENSG00000159479.16 TPM= 3.38 Transcript Type= NA
chr1	43363398	43389822	43363398	43389822	-	transcript3609.chr1.nnic@MED8	transcript3609.chr1.nnic	protein_coding	43389759,43388310,43387503,43386858,43386589,43385978,43385046,43365564,43365186,43364928,43364738,43364324,43363398	43389822,43388428,43387647,43386998,43386670,43386226,43385106,43365623,43365376,43365097,43364794,43364647,43364137	Gene ID= ENSG00000159479.16 TPM= 2.41 Transcript Type= NA
chr1	43384726	43389784	43384726	43389784	-	ENST00000372455.4@MED8	ENST00000372455.4	protein_coding	43389759,43388310,43387503,43386858,43386589,43385978,43384726	43389784,43388489,43387629,43386998,43386670,43386226,43385106	Gene ID= ENSG00000159479.16 TPM= 1.93 Transcript Type= protein_coding
chr1	43383969	43389808	43383969	43389808	-	ENST00000372457.8@MED8	ENST00000372457.8	protein_coding	43389759,43388310,43387503,43386858,43386589,43385978,43383969	43389808,43388428,43387647,43386998,43386670,43386226,43385106	Gene ID= ENSG00000159479.16 TPM= 6.76 Transcript Type= protein_coding
chr1	43451158	43453963	43451158	43453963	-	ENST00000372432.5@HYI	ENST00000372432.5	protein_coding	43453595,43453386,43452205,43451935,43451798,43451648,43451428,43451158	43453963,43453497,43452319,43452013,43451847,43451717,43451544,43451311	Gene ID= ENSG00000178922.16 TPM= 3.86 Transcript Type= protein_coding
chr1	43650158	43705515	43650158	43705515	+	ENST00000372396.3@KDM4A	ENST00000372396.3	protein_coding	43650158,43653137,43655591,43660298,43662894,43665696,43666452,43666954,43667772,43669100,43671505,43683684,43688914,43690845,43691496,43692256,43693994,43694709,43697843,43703617,43704020,43704230	43650252,43653313,43655766,43660412,43663087,43665745,43666555,43667091,43668019,43669299,43671875,43683804,43689095,43691049,43691572,43692311,43694102,43694894,43698013,43703736,43704112,43705515	Gene ID= ENSG00000066135.12 TPM= 4.83 Transcript Type= protein_coding
chr1	43707509	43931158	43707509	43931158	+	transcript3629.chr1.nnic@ST3GAL3	transcript3629.chr1.nnic	protein_coding	43707509,43736233,43792102,43814891,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43921443,43930132	43707693,43736380,43792149,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43921638,43931158	Gene ID= ENSG00000126091.19 TPM= 3.77 Transcript Type= NA
chr1	43707509	43931159	43707509	43931159	+	transcript3630.chr1.nic@ST3GAL3	transcript3630.chr1.nic	protein_coding	43707509,43736233,43792102,43814891,43838219,43894383,43898235,43899168,43899509,43920404,43920782,43930132	43707693,43736380,43792149,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931159	Gene ID= ENSG00000126091.19 TPM= 4.34 Transcript Type= NA
chr1	43707509	43931165	43707509	43931165	+	transcript3641.chr1.nic@ST3GAL3	transcript3641.chr1.nic	protein_coding	43707509,43736233,43814891,43838219,43894383,43898235,43899168,43899541,43930132	43707693,43736380,43814933,43838311,43894477,43898298,43899263,43899727,43931165	Gene ID= ENSG00000126091.19 TPM= 3.77 Transcript Type= NA
chr1	43707547	43931159	43707547	43931159	+	ENST00000361400.8@ST3GAL3	ENST00000361400.8	protein_coding	43707547,43736233,43814891,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132	43707693,43736380,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931159	Gene ID= ENSG00000126091.19 TPM= 9.89 Transcript Type= protein_coding
chr1	43707547	43931159	43707547	43931159	+	ENST00000361392.8@ST3GAL3	ENST00000361392.8	protein_coding	43707547,43736233,43792102,43814891,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132	43707693,43736380,43792149,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931159	Gene ID= ENSG00000126091.19 TPM= 55.26 Transcript Type= protein_coding
chr1	43707533	43931165	43707533	43931165	+	ENST00000353126.7@ST3GAL3	ENST00000353126.7	protein_coding	43707533,43736233,43792102,43814891,43838219,43894383,43898235,43899168,43899541,43930132	43707693,43736380,43792149,43814933,43838311,43894477,43898298,43899263,43899727,43931165	Gene ID= ENSG00000126091.19 TPM= 9.57 Transcript Type= protein_coding
chr1	43707533	43931165	43707533	43931165	+	ENST00000351035.7@ST3GAL3	ENST00000351035.7	protein_coding	43707533,43736233,43814891,43824731,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132	43707693,43736380,43814933,43824892,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931165	Gene ID= ENSG00000126091.19 TPM= 3.14 Transcript Type= protein_coding
chr1	43708824	43720591	43708824	43720591	-	transcript3646.chr1.nic@AL451062.1	transcript3646.chr1.nic	antisense_RNA	43720471,43718994,43708824	43720591,43719126,43709535	Gene ID= ENSG00000229444.1 TPM= 5.79 Transcript Type= NA
chr1	43946951	43959480	43946951	43959480	+	transcript3664.chr1.nic@IPO13	transcript3664.chr1.nic	protein_coding	43946951,43949417,43956320,43956560,43956810,43957195,43957402,43957977,43958242,43958461,43958746	43947684,43950153,43956460,43956701,43956976,43957315,43957549,43958158,43958268,43958595,43959480	Gene ID= ENSG00000117408.10 TPM= 5.79 Transcript Type= NA
chr1	43946918	43950366	43946918	43950366	+	transcript3665.chr1.nic@IPO13	transcript3665.chr1.nic	protein_coding	43946918,43949417	43947684,43950366	Gene ID= ENSG00000117408.10 TPM= 26.06 Transcript Type= NA
chr1	43946939	43968022	43946939	43968022	+	ENST00000372343.7@IPO13	ENST00000372343.7	protein_coding	43946939,43949417,43956320,43956560,43956810,43957195,43957402,43957977,43958242,43958461,43958746,43960249,43960876,43961166,43964269,43966575,43966724,43966930,43967315,43967586	43947684,43950153,43956460,43956701,43956976,43957315,43957549,43958158,43958268,43958595,43958889,43960329,43961013,43961262,43964321,43966641,43966782,43967019,43967496,43968022	Gene ID= ENSG00000117408.10 TPM= 46.33 Transcript Type= protein_coding
chr1	43946963	43950364	43946963	43950364	+	transcript3667.chr1.nnic@NA	transcript3667.chr1.nnic	NA	43946963	43950364	Gene ID= novel_gene_chr1_3668 TPM= 13.51 Transcript Type= NA
chr1	43969970	43973366	43969970	43973366	+	transcript3677.chr1.nic@DPH2	transcript3677.chr1.nic	protein_coding	43969970,43970596,43970966,43971387,43972158	43970322,43970708,43971189,43972070,43973366	Gene ID= ENSG00000132768.13 TPM= 3.62 Transcript Type= NA
chr1	43970004	43973369	43970004	43973369	+	ENST00000255108.7@DPH2	ENST00000255108.7	protein_coding	43970004,43970596,43970966,43971387,43972158,43972415	43970322,43970708,43971189,43972070,43972334,43973369	Gene ID= ENSG00000132768.13 TPM= 70.71 Transcript Type= protein_coding
chr1	43970010	43973369	43970010	43973369	+	ENST00000495421.1@DPH2	ENST00000495421.1	protein_coding	43970010,43970596,43970966,43971387,43972158,43972415	43970270,43970708,43971189,43972070,43972334,43973369	Gene ID= ENSG00000132768.13 TPM= 12.79 Transcript Type= nonsense_mediated_decay
chr1	43974461	43978295	43974461	43978295	+	transcript3683.chr1.nnic@ATP6V0B	transcript3683.chr1.nnic	protein_coding	43974461,43975800,43976090,43976302,43976590,43976773,43977026,43977981	43974614,43975848,43976173,43976379,43976659,43976824,43977216,43978295	Gene ID= ENSG00000117410.13 TPM= 6.68 Transcript Type= NA
chr1	43974648	43978294	43974648	43978294	+	ENST00000472174.6@ATP6V0B	ENST00000472174.6	protein_coding	43974648,43975800,43976090,43976302,43976590,43976773,43977026,43977981	43975107,43975848,43976173,43976379,43976659,43976824,43977216,43978294	Gene ID= ENSG00000117410.13 TPM= 163.06 Transcript Type= protein_coding
chr1	43974948	43978289	43974948	43978289	+	ENST00000236067.8@ATP6V0B	ENST00000236067.8	protein_coding	43974948,43976090,43976302,43976590,43976773,43977026,43977981	43975107,43976173,43976379,43976659,43976824,43977216,43978289	Gene ID= ENSG00000117410.13 TPM= 6.68 Transcript Type= protein_coding
chr1	43974972	43978292	43974972	43978292	+	ENST00000473485.5@ATP6V0B	ENST00000473485.5	protein_coding	43974972,43976090,43976302,43976590,43976773,43977026,43977981	43975848,43976173,43976379,43976659,43976824,43977216,43978292	Gene ID= ENSG00000117410.13 TPM= 1.21 Transcript Type= retained_intron
chr1	43979205	43991168	43979205	43991168	+	transcript3689.chr1.nic@B4GALT2	transcript3689.chr1.nic	protein_coding	43979205,43981109,43981689,43984865,43985278,43985517,43990298	43979616,43981473,43981924,43985055,43985400,43985621,43991168	Gene ID= ENSG00000117411.16 TPM= 41.03 Transcript Type= NA
chr1	43979202	43991170	43979202	43991170	+	ENST00000372324.5@B4GALT2	ENST00000372324.5	protein_coding	43979202,43981109,43981689,43984865,43985278,43985517,43990298	43979511,43981473,43981924,43985055,43985400,43985621,43991170	Gene ID= ENSG00000117411.16 TPM= 126.94 Transcript Type= protein_coding
chr1	43991787	43996524	43991787	43996524	+	transcript3697.chr1.nnic@CCDC24	transcript3697.chr1.nnic	protein_coding	43991787,43992523,43993890,43995108,43995601,43995778,43995938	43992004,43992639,43993964,43995162,43995670,43995856,43996524	Gene ID= ENSG00000159214.12 TPM= 1.93 Transcript Type= NA
chr1	44213471	44220681	44213471	44220681	+	transcript3703.chr1.nic@DMAP1	transcript3703.chr1.nic	protein_coding	44213471,44213749,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213662,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 3.38 Transcript Type= NA
chr1	44213455	44220681	44213455	44220681	+	ENST00000361745.10@DMAP1	ENST00000361745.10	protein_coding	44213455,44213749,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 2.41 Transcript Type= protein_coding
chr1	44213488	44220681	44213488	44220681	+	ENST00000315913.9@DMAP1	ENST00000315913.9	protein_coding	44213488,44213709,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 20.27 Transcript Type= protein_coding
chr1	44213491	44220681	44213491	44220681	+	ENST00000372289.6@DMAP1	ENST00000372289.6	protein_coding	44213491,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 15.44 Transcript Type= protein_coding
chr1	44221070	44355300	44221070	44355300	-	transcript3710.chr1.nnic@ERI3	transcript3710.chr1.nnic	protein_coding	44355260,44352850,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355300,44352925,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 18.13 Transcript Type= NA
chr1	44221070	44355257	44221070	44355257	-	transcript3713.chr1.nic@ERI3	transcript3713.chr1.nic	protein_coding	44354892,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355257,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 5.77 Transcript Type= NA
chr1	44221070	44355289	44221070	44355289	-	transcript3714.chr1.nnic@ERI3	transcript3714.chr1.nnic	protein_coding	44355260,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355289,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 16.2 Transcript Type= NA
chr1	44221070	44355300	44221070	44355300	-	transcript3715.chr1.nnic@ERI3	transcript3715.chr1.nnic	protein_coding	44355260,44352850,44319628,44313169,44308310,44284835,44247939,44221070	44355300,44352925,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 6.54 Transcript Type= NA
chr1	44221070	44355208	44221070	44355208	-	ENST00000372257.6@ERI3	ENST00000372257.6	protein_coding	44354892,44352850,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355208,44352925,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 107.13 Transcript Type= protein_coding
chr1	44631952	44651723	44631952	44651723	+	transcript3727.chr1.nic@RNF220	transcript3727.chr1.nic	protein_coding	44631952,44632343,44635545,44636030,44644698,44644995,44645221,44645410,44649661,44649883,44650704	44632208,44632385,44635588,44636162,44644794,44645081,44645276,44645488,44649769,44649957,44651723	Gene ID= ENSG00000187147.17 TPM= 65.32 Transcript Type= NA
chr1	44631952	44651723	44631952	44651723	+	transcript3730.chr1.nic@RNF220	transcript3730.chr1.nic	protein_coding	44631952,44632343,44635545,44636030,44644698,44644995,44645221,44645410,44649661,44649883,44650704	44632208,44632385,44635666,44636162,44644794,44645081,44645276,44645488,44649769,44649957,44651723	Gene ID= ENSG00000187147.17 TPM= 35.88 Transcript Type= NA
chr1	44631952	44636498	44631952	44636498	+	transcript3737.chr1.nic@RNF220	transcript3737.chr1.nic	protein_coding	44631952,44632343,44635545,44636030	44632208,44632385,44635588,44636498	Gene ID= ENSG00000187147.17 TPM= 2.9 Transcript Type= NA
chr1	44635238	44674462	44635238	44674462	-	ENST00000372243.7@TMEM53	ENST00000372243.7	protein_coding	44674331,44660174,44645360,44635238	44674462,44660295,44645464,44636457	Gene ID= ENSG00000126106.13 TPM= 1.93 Transcript Type= protein_coding
chr1	44775437	44778779	44775437	44778779	+	ENST00000396651.7@RPS8	ENST00000396651.7	protein_coding	44775437,44776034,44776675,44777614,44778000,44778576	44775600,44776140,44776774,44777789,44778129,44778779	Gene ID= ENSG00000142937.11 TPM= 482.49 Transcript Type= protein_coding
chr1	44775561	44778739	44775561	44778739	+	transcript3749.chr1.nic@RPS8	transcript3749.chr1.nic	protein_coding	44775561,44776034,44776675,44777614,44778000,44778576	44775600,44776140,44776774,44777737,44778129,44778739	Gene ID= ENSG00000142937.11 TPM= 44.24 Transcript Type= NA
chr1	44775573	44778779	44775573	44778779	+	ENST00000372209.3@RPS8	ENST00000372209.3	protein_coding	44775573,44776034,44776675,44777614,44778000,44778576	44775600,44776140,44776714,44777789,44778129,44778779	Gene ID= ENSG00000142937.11 TPM= 49.07 Transcript Type= protein_coding
chr1	44775636	44778779	44775636	44778779	+	ENST00000485390.5@RPS8	ENST00000485390.5	protein_coding	44775636,44776675,44777614,44778000,44778576	44776140,44776774,44777789,44778129,44778779	Gene ID= ENSG00000142937.11 TPM= 48.75 Transcript Type= processed_transcript
chr1	44800225	44805990	44800225	44805990	+	ENST00000372201.4@PLK3	ENST00000372201.4	protein_coding	44800225,44800840,44801036,44801622,44801845,44802760,44802955,44803268,44803600,44803931,44804163,44804339,44804650,44805266,44805487	44800673,44800947,44801152,44801751,44801932,44802855,44803153,44803391,44803691,44804024,44804246,44804501,44804779,44805379,44805990	Gene ID= ENSG00000173846.12 TPM= 8.69 Transcript Type= protein_coding
chr1	44850840	44986583	44850840	44986583	-	transcript3761.chr1.nic@EIF2B3	transcript3761.chr1.nic	protein_coding	44986493,44981021,44978315,44969978,44941506,44926628,44897355,44881612,44879818,44875618,44874678,44857704,44850840	44986583,44981177,44978460,44970044,44941665,44926739,44897444,44881739,44880008,44875695,44874826,44857807,44851003	Gene ID= ENSG00000070785.16 TPM= 1.93 Transcript Type= NA
chr1	44855910	44986582	44855910	44986582	-	transcript3766.chr1.nnic@EIF2B3	transcript3766.chr1.nnic	protein_coding	44986493,44981021,44978315,44941506,44926628,44897355,44881612,44879818,44875618,44874678,44857704,44855910	44986582,44981177,44978460,44941665,44926739,44897444,44881739,44880008,44875695,44874826,44857807,44856054	Gene ID= ENSG00000070785.16 TPM= 1.93 Transcript Type= NA
chr1	44850778	44986610	44850778	44986610	-	ENST00000360403.6@EIF2B3	ENST00000360403.6	protein_coding	44986493,44981021,44978315,44941506,44926628,44897355,44881612,44879818,44875618,44874678,44857704,44850778	44986610,44981177,44978460,44941665,44926739,44897444,44881739,44880008,44875695,44874826,44857807,44851003	Gene ID= ENSG00000070785.16 TPM= 22.2 Transcript Type= protein_coding
chr1	44874527	44986587	44874527	44986587	-	ENST00000372183.7@EIF2B3	ENST00000372183.7	protein_coding	44986493,44981021,44978315,44941506,44926628,44897355,44881612,44879818,44875618,44874527	44986587,44981177,44978460,44941665,44926739,44897444,44881739,44880008,44875695,44874826	Gene ID= ENSG00000070785.16 TPM= 1.93 Transcript Type= protein_coding
chr1	45002540	45011329	45002540	45011329	-	ENST00000372172.4@HECTD3	ENST00000372172.4	protein_coding	45010889,45010546,45010201,45009986,45009568,45009369,45009144,45008536,45008240,45007413,45007219,45006951,45006692,45005997,45005794,45004600,45004248,45004060,45003855,45003669,45002540	45011329,45010706,45010293,45010121,45009683,45009482,45009226,45008701,45008321,45007595,45007271,45007015,45006795,45006116,45005883,45004806,45004377,45004134,45003936,45003740,45003576	Gene ID= ENSG00000126107.14 TPM= 64.68 Transcript Type= protein_coding
chr1	45012223	45015575	45012223	45015575	+	transcript3782.chr1.nic@UROD	transcript3782.chr1.nic	protein_coding	45012223,45012857,45013136,45013292,45013594,45013909,45014439,45014736,45014940,45015337	45012285,45013019,45013215,45013354,45013791,45014070,45014576,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 4.51 Transcript Type= NA
chr1	45012147	45015575	45012147	45015575	+	ENST00000246337.8@UROD	ENST00000246337.8	protein_coding	45012147,45012907,45013136,45013292,45013594,45013909,45014439,45014736,45014940,45015337	45012285,45013019,45013215,45013354,45013791,45014070,45014576,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 38.29 Transcript Type= protein_coding
chr1	45012207	45015575	45012207	45015575	+	ENST00000636293.1@UROD	ENST00000636293.1	protein_coding	45012207,45012907,45013136,45013292,45013594,45013909,45014736,45014940,45015337	45012285,45013019,45013215,45013354,45013791,45014070,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 2.58 Transcript Type= protein_coding
chr1	45205949	45208723	45205949	45208723	+	transcript3793.chr1.nnic@NA	transcript3793.chr1.nnic	NA	45205949	45208723	Gene ID= novel_gene_chr1_3794 TPM= 1.93 Transcript Type= NA
chr1	45329242	45340470	45329242	45340470	-	ENST00000372115.7@MUTYH	ENST00000372115.7	protein_coding	45340219,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329242	45340470,45334511,45333561,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437	Gene ID= ENSG00000132781.17 TPM= 7.4 Transcript Type= protein_coding
chr1	45329243	45340470	45329243	45340470	-	ENST00000450313.5@MUTYH	ENST00000450313.5	protein_coding	45340219,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329243	45340470,45334511,45333603,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437	Gene ID= ENSG00000132781.17 TPM= 2.9 Transcript Type= protein_coding
chr1	45329242	45340115	45329242	45340115	-	ENST00000355498.6@MUTYH	ENST00000355498.6	protein_coding	45339976,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329242	45340115,45334511,45333561,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437	Gene ID= ENSG00000132781.17 TPM= 2.58 Transcript Type= protein_coding
chr1	45329242	45339954	45329242	45339954	-	ENST00000456914.6@MUTYH	ENST00000456914.6	protein_coding	45339899,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329242	45339954,45334511,45333561,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437	Gene ID= ENSG00000132781.17 TPM= 1.61 Transcript Type= protein_coding
chr1	45339670	45343975	45339670	45343975	+	ENST00000372090.5@TOE1	ENST00000372090.5	protein_coding	45339670,45341073,45341303,45341473,45341949,45342384,45342843,45343082	45340304,45341215,45341343,45341569,45342107,45342643,45343002,45343975	Gene ID= ENSG00000132773.11 TPM= 6.76 Transcript Type= protein_coding
chr1	45343883	45491166	45343883	45491166	-	ENST00000372086.3@TESK2	ENST00000372086.3	protein_coding	45490852,45457564,45421725,45385912,45355303,45347918,45347609,45346979,45346693,45345877,45343883	45491166,45457871,45421846,45385960,45355449,45348000,45347693,45347062,45346779,45345994,45345558	Gene ID= ENSG00000070759.16 TPM= 5.79 Transcript Type= protein_coding
chr1	45511036	45521938	45511036	45521938	-	ENST00000262746.5@PRDX1	ENST00000262746.5	protein_coding	45521609,45518938,45515654,45514873,45514507,45511036	45521938,45519054,45515807,45514995,45514637,45511414	Gene ID= ENSG00000117450.13 TPM= 8.21 Transcript Type= protein_coding
chr1	45511047	45521956	45511047	45521956	-	ENST00000319248.12@PRDX1	ENST00000319248.12	protein_coding	45521829,45518938,45515654,45514873,45514507,45511047	45521956,45519054,45515807,45514995,45514637,45511414	Gene ID= ENSG00000117450.13 TPM= 318.07 Transcript Type= protein_coding
chr1	45550804	45570047	45550804	45570047	+	transcript3826.chr1.nic@AKR1A1	transcript3826.chr1.nic	protein_coding	45550804,45550966,45552436,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45550876,45551155,45552563,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570047	Gene ID= ENSG00000117448.13 TPM= 2.25 Transcript Type= NA
chr1	45550804	45570047	45550804	45570047	+	transcript3827.chr1.nic@AKR1A1	transcript3827.chr1.nic	protein_coding	45550804,45550966,45552436,45561789,45566569,45566869,45567982,45568927,45569143,45569891	45550876,45551155,45552563,45561878,45566688,45567020,45568177,45568999,45569229,45570047	Gene ID= ENSG00000117448.13 TPM= 3.86 Transcript Type= NA
chr1	45550783	45570048	45550783	45570048	+	ENST00000621846.4@AKR1A1	ENST00000621846.4	protein_coding	45550783,45550966,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45550876,45551155,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570048	Gene ID= ENSG00000117448.13 TPM= 11.9 Transcript Type= protein_coding
chr1	45550543	45570049	45550543	45570049	+	ENST00000372070.7@AKR1A1	ENST00000372070.7	protein_coding	45550543,45552436,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45551155,45552563,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570049	Gene ID= ENSG00000117448.13 TPM= 9.97 Transcript Type= protein_coding
chr1	45584044	45618247	45584044	45618247	+	transcript3835.chr1.nic@NASP	transcript3835.chr1.nic	protein_coding	45584044,45591223,45600385,45602255,45604936,45606482,45607321,45613169,45614096,45614293,45615013,45615305,45616337,45616626,45618061	45584205,45591270,45600457,45602365,45605016,45606591,45608337,45613248,45614181,45614366,45615201,45615471,45616393,45616703,45618247	Gene ID= ENSG00000132780.16 TPM= 1.93 Transcript Type= NA
chr1	45610554	45618244	45610554	45618244	+	ENST00000481782.1@NASP	ENST00000481782.1	protein_coding	45610554,45614096,45614293,45615013,45615305,45616337,45616626,45617463,45618061	45613248,45614181,45614366,45615201,45615471,45616393,45616703,45617591,45618244	Gene ID= ENSG00000132780.16 TPM= 2.9 Transcript Type= retained_intron
chr1	45584065	45618247	45584065	45618247	+	ENST00000351223.7@NASP	ENST00000351223.7	protein_coding	45584065,45591223,45602255,45604936,45606482,45613169,45614096,45614293,45615013,45615305,45616337,45616626,45617463,45618061	45584205,45591270,45602365,45605016,45606591,45613248,45614181,45614366,45615201,45615471,45616393,45616703,45617591,45618247	Gene ID= ENSG00000132780.16 TPM= 4.83 Transcript Type= protein_coding
chr1	45627306	45686630	45627306	45686630	-	ENST00000355105.7@GPBP1L1	ENST00000355105.7	protein_coding	45686412,45685576,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627306	45686630,45685620,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 8.3 Transcript Type= protein_coding
chr1	45627490	45687098	45627490	45687098	-	transcript3844.chr1.nic@GPBP1L1	transcript3844.chr1.nic	protein_coding	45686993,45685576,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627490	45687098,45685620,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 2.51 Transcript Type= NA
chr1	45627304	45687136	45627304	45687136	-	transcript3848.chr1.nic@GPBP1L1	transcript3848.chr1.nic	protein_coding	45686993,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627304	45687136,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 4.44 Transcript Type= NA
chr1	45627304	45686536	45627304	45686536	-	ENST00000290795.7@GPBP1L1	ENST00000290795.7	protein_coding	45686412,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627304	45686536,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 4.44 Transcript Type= protein_coding
chr1	45687214	45694443	45687214	45694443	+	ENST00000372025.4@TMEM69	ENST00000372025.4	protein_coding	45687214,45690974,45693204	45688275,45691110,45694443	Gene ID= ENSG00000159596.6 TPM= 14.48 Transcript Type= protein_coding
chr1	45697062	45750653	45697062	45750653	-	transcript3856.chr1.nnic@IPP	transcript3856.chr1.nnic	protein_coding	45750597,45746120,45740901,45729614,45727631,45719203,45716895,45714246,45698830,45697062	45750653,45746461,45741332,45729769,45727798,45719340,45717017,45714466,45700190,45697364	Gene ID= ENSG00000197429.10 TPM= 2.25 Transcript Type= NA
chr1	45698711	45750795	45698711	45750795	-	transcript3858.chr1.nnic@IPP	transcript3858.chr1.nnic	protein_coding	45750597,45746120,45740901,45729614,45727631,45719203,45716895,45714246,45698711	45750795,45746461,45741332,45729769,45727798,45719340,45717017,45714354,45700190	Gene ID= ENSG00000197429.10 TPM= 3.21 Transcript Type= NA
chr1	45698711	45750649	45698711	45750649	-	ENST00000396478.3@IPP	ENST00000396478.3	protein_coding	45750597,45746120,45740901,45729614,45727631,45719203,45716895,45714246,45698711	45750649,45746461,45741332,45729769,45727798,45719340,45717017,45714466,45700190	Gene ID= ENSG00000197429.10 TPM= 9.01 Transcript Type= protein_coding
chr1	45803598	46036124	45803598	46036124	+	transcript3872.chr1.nnic@MAST2	transcript3872.chr1.nnic	protein_coding	45803598,45824433,45829439,45882364,45959386,45997724,46000957,46002803,46006241,46008296,46010730,46019596,46021948,46022910,46023233,46023772,46025677,46027731,46028768,46029466,46029831,46030129,46030607,46031007,46031391,46032178,46032596,46033802,46034073,46034538	45804072,45824580,45829581,45882395,45959477,45997797,46000977,46002883,46006395,46008371,46010939,46019697,46022082,46022971,46023318,46023980,46025815,46027863,46028933,46029567,46029953,46030238,46030761,46031290,46031585,46032404,46032718,46033938,46034266,46036124	Gene ID= ENSG00000086015.20 TPM= 40.06 Transcript Type= NA
chr1	45803613	46036124	45803613	46036124	+	ENST00000361297.6@MAST2	ENST00000361297.6	protein_coding	45803613,45824433,45829439,45882364,45959386,45997724,46002805,46006241,46008296,46010730,46019596,46021950,46022910,46023233,46023772,46025677,46027731,46028768,46029466,46029831,46030129,46030607,46031007,46031391,46032178,46032596,46033802,46034073,46034538	45804072,45824580,45829581,45882395,45959477,45997799,46002883,46006395,46008371,46010939,46019697,46022082,46022971,46023318,46023980,46025815,46027863,46028933,46029567,46029953,46030238,46030761,46031290,46031585,46032404,46032718,46033938,46034266,46036124	Gene ID= ENSG00000086015.20 TPM= 191.61 Transcript Type= protein_coding
chr1	46040140	46132642	46040140	46132642	-	ENST00000262741.9@PIK3R3	ENST00000262741.9	protein_coding	46131847,46080642,46077515,46066911,46066054,46061929,46055795,46046551,46045918,46040140	46132642,46080750,46077613,46067091,46066179,46062071,46055971,46046625,46046088,46043871	Gene ID= ENSG00000117461.14 TPM= 15.44 Transcript Type= protein_coding
chr1	46183403	46185958	46183403	46185958	+	transcript3891.chr1.nic@TSPAN1	transcript3891.chr1.nic	protein_coding	46183403,46184191,46184594,46184785,46184960,46185225,46185486	46183683,46184397,46184668,46184883,46185115,46185308,46185958	Gene ID= ENSG00000117472.9 TPM= 2.9 Transcript Type= NA
chr1	46183403	46185958	46183403	46185958	+	transcript3892.chr1.nic@TSPAN1	transcript3892.chr1.nic	protein_coding	46183403,46184191,46184785,46184960,46185225,46185486	46183683,46184668,46184883,46185115,46185308,46185958	Gene ID= ENSG00000117472.9 TPM= 1.93 Transcript Type= NA
chr1	46188684	46198474	46188684	46198474	-	transcript3899.chr1.nnic@POMGNT1	transcript3899.chr1.nnic	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46189180,46188684	46198474,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46189357,46188980	Gene ID= ENSG00000085998.13 TPM= 3.21 Transcript Type= NA
chr1	46188684	46198474	46188684	46198474	-	transcript3903.chr1.nic@POMGNT1	transcript3903.chr1.nic	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46188684	46198474,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46188980	Gene ID= ENSG00000085998.13 TPM= 4.18 Transcript Type= NA
chr1	46188686	46198474	46188686	46198474	-	transcript3906.chr1.nic@POMGNT1	transcript3906.chr1.nic	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46188686	46198474,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567	Gene ID= ENSG00000085998.13 TPM= 7.08 Transcript Type= NA
chr1	46188683	46198474	46188683	46198474	-	transcript3907.chr1.nic@POMGNT1	transcript3907.chr1.nic	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46188683	46198474,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46189357	Gene ID= ENSG00000085998.13 TPM= 7.4 Transcript Type= NA
chr1	46188683	46198443	46188683	46198443	-	ENST00000371984.7@POMGNT1	ENST00000371984.7	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46188683	46198443,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46189357	Gene ID= ENSG00000085998.13 TPM= 89.46 Transcript Type= protein_coding
chr1	46261196	46303380	46261196	46303380	-	transcript3913.chr1.nic@LRRC41	transcript3913.chr1.nic	protein_coding	46303124,46298284,46297563,46285362,46281125,46280396,46280192,46279492,46279182,46267495,46261196	46303380,46298370,46297633,46286499,46281385,46280560,46280290,46279614,46279257,46267677,46261404	Gene ID= ENSG00000132128.16 TPM= 13.25 Transcript Type= NA
chr1	46277462	46303608	46277462	46303608	-	ENST00000617190.4@LRRC41	ENST00000617190.4	protein_coding	46303124,46298284,46297563,46285362,46281125,46280396,46280192,46279492,46279182,46277462	46303608,46298370,46297633,46286499,46281385,46280560,46280290,46279614,46279257,46279084	Gene ID= ENSG00000132128.16 TPM= 8.81 Transcript Type= protein_coding
chr1	46278400	46303316	46278400	46303316	-	transcript3924.chr1.nic@LRRC41	transcript3924.chr1.nic	protein_coding	46303124,46298284,46297563,46285362,46281125,46280396,46280192,46278400	46303316,46298370,46297633,46286499,46281385,46280560,46280290,46279614	Gene ID= ENSG00000132128.16 TPM= 6.5 Transcript Type= NA
chr1	46284170	46303317	46284170	46303317	-	transcript3934.chr1.nic@LRRC41	transcript3934.chr1.nic	protein_coding	46303124,46298284,46297563,46284170	46303317,46298370,46297633,46286499	Gene ID= ENSG00000132128.16 TPM= 5.41 Transcript Type= NA
chr1	46303631	46316776	46303631	46316776	+	ENST00000311672.9@UQCRH	ENST00000311672.9	protein_coding	46303631,46309101,46310155,46316552	46303820,46309127,46310316,46316776	Gene ID= ENSG00000173660.11 TPM= 168.93 Transcript Type= protein_coding
chr1	46303709	46316776	46303709	46316776	+	ENST00000496387.5@UQCRH	ENST00000496387.5	protein_coding	46303709,46309101,46309897,46310155,46316552	46303820,46309127,46310044,46310316,46316776	Gene ID= ENSG00000173660.11 TPM= 24.13 Transcript Type= nonsense_mediated_decay
chr1	46340177	46362191	46340177	46362191	+	ENST00000474844.5@NSUN4	ENST00000474844.5	protein_coding	46340177,46344801,46346921,46352868,46360704,46361570	46340919,46345144,46347075,46353028,46360828,46362191	Gene ID= ENSG00000117481.10 TPM= 3.86 Transcript Type= protein_coding
chr1	46394265	46413845	46394265	46413845	+	ENST00000243167.8@FAAH	ENST00000243167.8	protein_coding	46394265,46402091,46405014,46405372,46405588,46406038,46406244,46408459,46409101,46410398,46410814,46411612,46412143,46413075,46413447	46394543,46402204,46405148,46405505,46405794,46406078,46406368,46408584,46409198,46410497,46410854,46411651,46412251,46413220,46413845	Gene ID= ENSG00000117480.15 TPM= 20.75 Transcript Type= protein_coding
chr1	46394288	46413845	46394288	46413845	+	transcript3938.chr1.nic@FAAH	transcript3938.chr1.nic	protein_coding	46394288,46402091,46405014,46405372,46405588,46406038,46406244,46408459,46409101,46410398,46410814,46411612,46412143,46413123,46413447	46394543,46402204,46405148,46405505,46405794,46406078,46406368,46408584,46409198,46410497,46410854,46411651,46412251,46413220,46413845	Gene ID= ENSG00000117480.15 TPM= 1.93 Transcript Type= NA
chr1	46394288	46413845	46394288	46413845	+	transcript3939.chr1.nnic@FAAH	transcript3939.chr1.nnic	protein_coding	46394288,46402091,46405014,46405372,46405588,46406038,46406244,46408459,46409101,46410398,46410814,46411612,46412143,46413075,46413447	46394543,46402240,46405148,46405505,46405794,46406078,46406368,46408584,46409198,46410497,46410854,46411651,46412251,46413220,46413845	Gene ID= ENSG00000117480.15 TPM= 2.41 Transcript Type= NA
chr1	46557408	46604266	46557408	46604266	-	transcript3950.chr1.nic@MKNK1	transcript3950.chr1.nic	protein_coding	46604185,46594113,46585874,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46560234,46557408	46604266,46594280,46585974,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46560277,46558800	Gene ID= ENSG00000079277.19 TPM= 8.85 Transcript Type= NA
chr1	46557408	46604266	46557408	46604266	-	transcript3951.chr1.nic@MKNK1	transcript3951.chr1.nic	protein_coding	46604227,46594113,46585874,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46560234,46557408	46604266,46594280,46585974,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46560277,46558800	Gene ID= ENSG00000079277.19 TPM= 9.82 Transcript Type= NA
chr1	46557419	46604237	46557419	46604237	-	ENST00000371945.8@MKNK1	ENST00000371945.8	protein_coding	46604185,46594113,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46560234,46557419	46604237,46594280,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46560277,46558800	Gene ID= ENSG00000079277.19 TPM= 2.58 Transcript Type= protein_coding
chr1	46607715	46616891	46607715	46616891	-	ENST00000319928.7@MOB3C	ENST00000319928.7	protein_coding	46616711,46612904,46610002,46607715	46616891,46613371,46610204,46609684	Gene ID= ENSG00000142961.14 TPM= 43.92 Transcript Type= protein_coding
chr1	46607719	46616870	46607719	46616870	-	transcript3962.chr1.nnic@MOB3C	transcript3962.chr1.nnic	protein_coding	46616711,46612904,46607719	46616870,46613371,46609684	Gene ID= ENSG00000142961.14 TPM= 8.21 Transcript Type= NA
chr1	46635045	46668364	46635045	46668364	-	ENST00000574428.5@ATPAF1	ENST00000574428.5	protein_coding	46668057,46665256,46658687,46658127,46653817,46652581,46645161,46643194,46635045	46668364,46665364,46658737,46658189,46653867,46652628,46645256,46643301,46635970	Gene ID= ENSG00000123472.12 TPM= 300.05 Transcript Type= protein_coding
chr1	46678207	46719154	46678207	46719154	-	transcript3991.chr1.nic@EFCAB14	transcript3991.chr1.nic	protein_coding	46717903,46716295,46707906,46696551,46691827,46689587,46686784,46684491,46683300,46678207	46719154,46716443,46708051,46696649,46691937,46689691,46686870,46684602,46683425,46678636	Gene ID= ENSG00000159658.10 TPM= 1.93 Transcript Type= NA
chr1	46686798	46719154	46686798	46719154	-	transcript3992.chr1.nic@EFCAB14	transcript3992.chr1.nic	protein_coding	46717903,46716295,46707906,46696551,46691827,46689587,46688353,46686798	46719154,46716443,46708051,46696649,46691937,46689691,46688544,46686870	Gene ID= ENSG00000159658.10 TPM= 3.86 Transcript Type= NA
chr1	46675159	46719064	46675159	46719064	-	ENST00000371933.7@EFCAB14	ENST00000371933.7	protein_coding	46717903,46716295,46707906,46696551,46691827,46689587,46688353,46686784,46684491,46683300,46675159	46719064,46716443,46708051,46696649,46691937,46689691,46688544,46686870,46684602,46683425,46678636	Gene ID= ENSG00000159658.10 TPM= 23.17 Transcript Type= protein_coding
chr1	46798995	46869441	46798995	46869441	+	transcript4007.chr1.nnic@CYP4B1	transcript4007.chr1.nnic	protein_coding	46798995,46810808,46811140,46812496,46813482,46813909,46814209,46815074,46868830	46799261,46810949,46811184,46812623,46813606,46814063,46814315,46815264,46869441	Gene ID= ENSG00000142973.13 TPM= 3.86 Transcript Type= NA
chr1	46799046	46819349	46799046	46819349	+	ENST00000371923.8@CYP4B1	ENST00000371923.8	protein_coding	46799046,46810808,46811140,46812496,46813482,46813909,46814209,46815074,46817048,46817965,46818131,46818631	46799261,46810949,46811184,46812623,46813606,46814063,46814315,46815264,46817181,46818029,46818213,46819349	Gene ID= ENSG00000142973.13 TPM= 50.2 Transcript Type= protein_coding
chr1	47333797	47378839	47333797	47378839	+	ENST00000371873.9@CMPK1	ENST00000371873.9	protein_coding	47333797,47368469,47372955,47374909,47375197,47376704	47334116,47368615,47373107,47374985,47375293,47378839	Gene ID= ENSG00000162368.13 TPM= 222.02 Transcript Type= protein_coding
chr1	50441276	50960268	50441276	50960268	-	transcript4026.chr1.nnic@FAF1	transcript4026.chr1.nnic	protein_coding	50959767,50857929,50801631,50788000,50744684,50738863,50705786,50655442,50596121,50584685,50583652,50582618,50577400,50567077,50539592,50535369,50491721,50490588,50475464,50441276	50960268,50857997,50801677,50788205,50744775,50738954,50705891,50655528,50596216,50584811,50583715,50582699,50577521,50567231,50539728,50535457,50491801,50490665,50475679,50441523	Gene ID= ENSG00000185104.19 TPM= 9.65 Transcript Type= NA
chr1	50439423	50441377	50439423	50441377	-	transcript4042.chr1.nnic@NA	transcript4042.chr1.nnic	NA	50439423	50441377	Gene ID= novel_gene_chr1_4043 TPM= 1.93 Transcript Type= NA
chr1	50967884	50970183	50967884	50970183	-	transcript4049.chr1.nnic@NA	transcript4049.chr1.nnic	NA	50967884	50970183	Gene ID= novel_gene_chr1_4050 TPM= 5.79 Transcript Type= NA
chr1	51236319	51273105	51236319	51273105	+	transcript4056.chr1.nnic@RNF11	transcript4056.chr1.nnic	protein_coding	51236319,51236498,51269956,51271151	51236456,51236879,51270125,51273105	Gene ID= ENSG00000123091.4 TPM= 123.56 Transcript Type= NA
chr1	51236271	51273455	51236271	51273455	+	ENST00000242719.3@RNF11	ENST00000242719.3	protein_coding	51236271,51269956,51271151	51236879,51270125,51273455	Gene ID= ENSG00000123091.4 TPM= 22.85 Transcript Type= protein_coding
chr1	51287812	51330547	51287812	51330547	-	transcript4075.chr1.nic@TTC39A	transcript4075.chr1.nic	protein_coding	51330437,51321721,51312812,51312119,51311254,51309261,51305977,51305081,51303084,51302506,51302357,51301572,51296079,51294391,51290514,51290005,51288839,51287812	51330547,51321825,51312943,51312195,51311321,51309325,51306076,51305146,51303192,51302573,51302416,51301733,51296170,51294511,51290625,51290119,51288955,51288280	Gene ID= ENSG00000085831.15 TPM= 1.93 Transcript Type= NA
chr1	51287752	51330583	51287752	51330583	-	transcript4080.chr1.nnic@TTC39A	transcript4080.chr1.nnic	protein_coding	51330437,51312812,51309261,51305977,51305081,51303084,51302506,51302357,51301572,51296079,51294391,51290514,51290005,51288839,51287752	51330583,51312943,51309325,51306076,51305146,51303192,51302573,51302416,51301733,51296170,51294511,51290625,51290119,51288955,51288280	Gene ID= ENSG00000085831.15 TPM= 1.93 Transcript Type= NA
chr1	51355237	51519276	51355237	51519276	-	transcript4083.chr1.nnic@EPS15	transcript4083.chr1.nnic	protein_coding	51519199,51481273,51472859,51471690,51468473,51465261,51463673,51461091,51447935,51446960,51444889,51440347,51421786,51409535,51408135,51405905,51403419,51402435,51400918,51399032,51394381,51365953,51363866,51361171,51355237	51519276,51481314,51472948,51471737,51468568,51465326,51463798,51461150,51448135,51447105,51445045,51440432,51421858,51409696,51408332,51406108,51403532,51402525,51400953,51399165,51394447,51366029,51364028,51361355,51356846	Gene ID= ENSG00000085832.16 TPM= 4.59 Transcript Type= NA
chr1	51354415	51519367	51354415	51519367	-	transcript4085.chr1.nnic@EPS15	transcript4085.chr1.nnic	protein_coding	51519199,51481273,51472859,51471690,51468473,51465261,51463673,51461091,51446960,51444889,51440347,51421786,51409535,51408135,51405905,51403419,51402435,51400918,51399032,51394381,51365953,51363866,51361171,51354415	51519367,51481314,51472948,51471737,51468568,51465326,51463798,51461150,51447105,51445045,51440432,51421858,51409696,51408332,51406108,51403532,51402525,51400953,51399165,51394447,51366029,51364028,51361355,51356846	Gene ID= ENSG00000085832.16 TPM= 10.86 Transcript Type= NA
chr1	51355237	51519266	51355237	51519266	-	transcript4086.chr1.nic@EPS15	transcript4086.chr1.nic	protein_coding	51519199,51481273,51472859,51471690,51465261,51463673,51461091,51448046,51446960,51444889,51440347,51421786,51409535,51408135,51405905,51403419,51402435,51400918,51399032,51394381,51365953,51363866,51361171,51355237	51519266,51481314,51472948,51471737,51465326,51463798,51461150,51448135,51447105,51445045,51440432,51421858,51409696,51408332,51406108,51403532,51402525,51400953,51399165,51394447,51366029,51364028,51361355,51356846	Gene ID= ENSG00000085832.16 TPM= 3.62 Transcript Type= NA
chr1	51577179	51788469	51577179	51788469	+	ENST00000371714.5@OSBPL9	ENST00000371714.5	protein_coding	51577179,51598124,51614305,51616874,51651991,51669434,51714003,51745536,51746710,51748369,51750145,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51577256,51598193,51614419,51617221,51652041,51669512,51714079,51745631,51746757,51748398,51750195,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 17.3 Transcript Type= protein_coding
chr1	51617085	51654030	51617085	51654030	+	transcript4166.chr1.nic@OSBPL9	transcript4166.chr1.nic	protein_coding	51617085,51651991	51617221,51654030	Gene ID= ENSG00000117859.18 TPM= 3.86 Transcript Type= NA
chr1	51617092	51788469	51617092	51788469	+	ENST00000447887.5@OSBPL9	ENST00000447887.5	protein_coding	51617092,51651991,51669434,51714003,51740143,51745536,51746710,51748369,51750145,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51617221,51652041,51669512,51714079,51740211,51745631,51746757,51748398,51750195,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 20.19 Transcript Type= protein_coding
chr1	51617109	51788469	51617109	51788469	+	ENST00000428468.5@OSBPL9	ENST00000428468.5	protein_coding	51617109,51651991,51669434,51714003,51745536,51746710,51748369,51750145,51756320,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51617221,51652041,51669512,51714079,51745631,51746757,51748398,51750195,51756358,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 4.51 Transcript Type= protein_coding
chr1	51789196	51878937	51789196	51878937	-	ENST00000544028.5@NRDC	ENST00000544028.5	protein_coding	51878275,51840226,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51816312,51814693,51814551,51814035,51811994,51810281,51809315,51806794,51805510,51803814,51800556,51798249,51794823,51794472,51792377,51792046,51791578,51790900,51790533,51789568,51789196	51878937,51840514,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389,51814813,51814609,51814089,51812098,51810404,51809401,51806913,51805561,51803964,51800683,51798411,51794854,51794610,51792425,51792098,51791661,51790990,51790649,51789657,51789433	Gene ID= ENSG00000078618.21 TPM= 17.15 Transcript Type= protein_coding
chr1	51789191	51878805	51789191	51878805	-	ENST00000354831.11@NRDC	ENST00000354831.11	protein_coding	51878275,51840226,51837487,51836369,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51816312,51814693,51814551,51814035,51811994,51810281,51809315,51806794,51805510,51803814,51800556,51798249,51794823,51794472,51792377,51792046,51791578,51790900,51790533,51789568,51789191	51878805,51840514,51837620,51836438,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389,51814813,51814609,51814089,51812098,51810404,51809401,51806913,51805561,51803964,51800683,51798411,51794854,51794610,51792424,51792098,51791661,51790990,51790649,51789657,51789433	Gene ID= ENSG00000078618.21 TPM= 68.29 Transcript Type= protein_coding
chr1	51789191	51878805	51789191	51878805	-	ENST00000352171.11@NRDC	ENST00000352171.11	protein_coding	51878275,51840226,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51816312,51814693,51814551,51814035,51811994,51810281,51809315,51806794,51805510,51803814,51800556,51798249,51794823,51794472,51792377,51792046,51791578,51790900,51790533,51789568,51789191	51878805,51840514,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389,51814813,51814609,51814089,51812098,51810404,51809401,51806913,51805561,51803964,51800683,51798411,51794854,51794610,51792424,51792098,51791661,51790990,51790649,51789657,51789433	Gene ID= ENSG00000078618.21 TPM= 275.35 Transcript Type= protein_coding
chr1	52020131	52056171	52020131	52056171	-	ENST00000371626.8@TXNDC12	ENST00000371626.8	protein_coding	52055000,52041537,52028578,52027275,52024510,52023491,52020131	52056171,52041597,52028630,52027348,52024579,52023574,52021012	Gene ID= ENSG00000117862.11 TPM= 30.89 Transcript Type= protein_coding
chr1	52032103	52033816	52032103	52033816	-	ENST00000371614.1@KTI12	ENST00000371614.1	protein_coding	52032103	52033816	Gene ID= ENSG00000198841.3 TPM= 17.38 Transcript Type= protein_coding
chr1	52056125	52090716	52056125	52090716	+	ENST00000313334.12@BTF3L4	ENST00000313334.12	protein_coding	52056125,52059835,52064825,52083340,52086112,52086712	52056379,52059901,52064938,52083541,52086171,52090716	Gene ID= ENSG00000134717.17 TPM= 3.86 Transcript Type= protein_coding
chr1	52056304	52088418	52056304	52088418	+	ENST00000472944.6@BTF3L4	ENST00000472944.6	protein_coding	52056304,52064825,52083340,52086112,52086712	52056379,52064938,52083541,52086171,52088418	Gene ID= ENSG00000134717.17 TPM= 13.51 Transcript Type= protein_coding
chr1	52056271	52087155	52056271	52087155	+	ENST00000489308.6@BTF3L4	ENST00000489308.6	protein_coding	52056271,52059835,52064825,52086112,52086712	52056379,52059901,52064938,52086171,52087155	Gene ID= ENSG00000134717.17 TPM= 6.76 Transcript Type= protein_coding
chr1	52142057	52238926	52142057	52238926	+	transcript4210.chr1.nic@ZFYVE9	transcript4210.chr1.nic	protein_coding	52142057,52216369,52233171,52237488	52142403,52216474,52233276,52238926	Gene ID= ENSG00000157077.14 TPM= 2.9 Transcript Type= NA
chr1	52142108	52160769	52142108	52160769	+	transcript4213.chr1.nnic@ZFYVE9	transcript4213.chr1.nnic	protein_coding	52142108,52160117	52142403,52160769	Gene ID= ENSG00000157077.14 TPM= 1.93 Transcript Type= NA
chr1	52345723	52366217	52345723	52366217	-	transcript4195.chr1.nic@CC2D1B	transcript4195.chr1.nic	protein_coding	52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52353518,52345723	52366217,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357898,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647,52346203	Gene ID= ENSG00000154222.14 TPM= 2.65 Transcript Type= NA
chr1	52352532	52366166	52352532	52366166	-	transcript4197.chr1.nnic@CC2D1B	transcript4197.chr1.nnic	protein_coding	52366069,52364552,52362629,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52353518,52352532	52366166,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357898,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647,52353223	Gene ID= ENSG00000154222.14 TPM= 4.42 Transcript Type= NA
chr1	52352541	52366217	52352541	52366217	-	transcript4200.chr1.nic@CC2D1B	transcript4200.chr1.nic	protein_coding	52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52352541	52366217,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357898,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647	Gene ID= ENSG00000154222.14 TPM= 4.9 Transcript Type= NA
chr1	52352532	52366179	52352532	52366179	-	ENST00000284376.7@CC2D1B	ENST00000284376.7	protein_coding	52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52353518,52352532	52366179,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357898,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647,52353223	Gene ID= ENSG00000154222.14 TPM= 65.24 Transcript Type= protein_coding
chr1	52423275	52553100	52423275	52553100	-	ENST00000371544.7@ZCCHC11	ENST00000371544.7	protein_coding	52552931,52525563,52515891,52509596,52497006,52495427,52493611,52490732,52488909,52481804,52481423,52477708,52474832,52471952,52468181,52465070,52461712,52461513,52461134,52458336,52446590,52446265,52445957,52445787,52438220,52436755,52435365,52431013,52425349,52423275	52553100,52526373,52516054,52509712,52497183,52495515,52493662,52490801,52489035,52481923,52481635,52477882,52475535,52472102,52468267,52465173,52461769,52461616,52461223,52458449,52446667,52446442,52446004,52445869,52438335,52436975,52435465,52431460,52425507,52424002	Gene ID= ENSG00000134744.13 TPM= 6.76 Transcript Type= protein_coding
chr1	52514778	52552994	52514778	52552994	-	ENST00000355809.4@ZCCHC11	ENST00000355809.4	protein_coding	52552931,52525563,52514778	52552994,52526373,52516054	Gene ID= ENSG00000134744.13 TPM= 1.93 Transcript Type= protein_coding
chr1	52602521	52608898	52602521	52608898	+	transcript4225.chr1.nnic@GPX7	transcript4225.chr1.nnic	protein_coding	52602521,52606684,52608262	52603595,52606945,52608898	Gene ID= ENSG00000116157.5 TPM= 1.93 Transcript Type= NA
chr1	52602510	52608898	52602510	52608898	+	transcript4227.chr1.nnic@GPX7	transcript4227.chr1.nnic	protein_coding	52602510,52606684,52608262	52603766,52606945,52608898	Gene ID= ENSG00000116157.5 TPM= 1.93 Transcript Type= NA
chr1	52602372	52609051	52602372	52609051	+	ENST00000361314.4@GPX7	ENST00000361314.4	protein_coding	52602372,52606684,52608262	52602547,52606945,52609051	Gene ID= ENSG00000116157.5 TPM= 2.9 Transcript Type= protein_coding
chr1	52726500	52823302	52726500	52823302	+	transcript4242.chr1.nnic@ZYG11B	transcript4242.chr1.nnic	protein_coding	52726500,52756458,52757198,52771020,52779853,52784877,52790003,52796292,52796734,52801819,52802092,52813536,52813860,52816532,52821439	52726683,52756623,52757310,52771774,52779993,52785053,52790067,52796391,52796784,52801980,52802139,52813733,52813912,52816629,52823302	Gene ID= ENSG00000162378.12 TPM= 5.79 Transcript Type= NA
chr1	52726498	52824145	52726498	52824145	+	transcript4254.chr1.nnic@ZYG11B	transcript4254.chr1.nnic	protein_coding	52726498,52756458,52771020,52779853,52784877,52790003,52796292,52796734,52801819,52802092,52813536,52813860,52821439	52726683,52756623,52771774,52779993,52785053,52790067,52796391,52796784,52801980,52802139,52813733,52813912,52824145	Gene ID= ENSG00000162378.12 TPM= 11.58 Transcript Type= NA
chr1	52772194	52772648	52772194	52772648	-	ENST00000437890.1@RPS13P2	ENST00000437890.1	processed_pseudogene	52772194	52772648	Gene ID= ENSG00000228929.1 TPM= 3.86 Transcript Type= processed_pseudogene
chr1	52896232	52921758	52896232	52921758	-	transcript4263.chr1.nic@ECHDC2	transcript4263.chr1.nic	protein_coding	52921553,52913895,52911723,52911566,52907868,52906519,52905034,52904646,52899174,52897437,52896232	52921758,52914095,52912021,52911653,52907954,52906611,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 5.79 Transcript Type= NA
chr1	52895984	52921767	52895984	52921767	-	ENST00000371522.8@ECHDC2	ENST00000371522.8	protein_coding	52921553,52911723,52911566,52907868,52906519,52905034,52904646,52899174,52897437,52895984	52921767,52911790,52911653,52907954,52906611,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 14.48 Transcript Type= protein_coding
chr1	52896232	52921758	52896232	52921758	-	transcript4267.chr1.nic@ECHDC2	transcript4267.chr1.nic	protein_coding	52921553,52913895,52911723,52911566,52907868,52905034,52904646,52899174,52897437,52896232	52921758,52914095,52911790,52911653,52907954,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 1.93 Transcript Type= NA
chr1	52896232	52921758	52896232	52921758	-	transcript4269.chr1.nic@ECHDC2	transcript4269.chr1.nic	protein_coding	52921553,52913895,52911723,52911566,52907868,52905034,52904646,52899174,52897437,52896232	52921758,52914095,52912021,52911653,52907954,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 2.9 Transcript Type= NA
chr1	52896233	52921726	52896233	52921726	-	ENST00000358358.9@ECHDC2	ENST00000358358.9	protein_coding	52921553,52911723,52911566,52907868,52905034,52904646,52899174,52897437,52896233	52921726,52911790,52911653,52907954,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 5.79 Transcript Type= protein_coding
chr1	52927229	53051703	52927229	53051703	+	ENST00000371514.7@SCP2	ENST00000371514.7	protein_coding	52927229,52941796,52948009,52950755,52954740,52961503,52974769,52976683,52978217,52980396,52988029,53014890,53027969,53038917,53047858,53050609	52927465,52941853,52948080,52950886,52954804,52961629,52974832,52976769,52978367,52980543,52988136,53015043,53028071,53039046,53047937,53051703	Gene ID= ENSG00000116171.17 TPM= 84.95 Transcript Type= protein_coding
chr1	52927249	53051617	52927249	53051617	+	transcript4280.chr1.nic@SCP2	transcript4280.chr1.nic	protein_coding	52927249,52941796,52948009,52950755,52954740,52961503,52974769,52976683,52978217,52980396,52988029,53014890,53027969,53047858,53050609	52927465,52941853,52948080,52950886,52954804,52961629,52974832,52976769,52978367,52980543,52988136,53015043,53028071,53047937,53051617	Gene ID= ENSG00000116171.17 TPM= 8.69 Transcript Type= NA
chr1	52927286	53050970	52927286	53050970	+	ENST00000371509.8@SCP2	ENST00000371509.8	protein_coding	52927286,52941796,52948009,52954740,52961503,52974769,52976683,52978217,52980396,52988029,53014890,53027969,53038917,53047858,53050609	52927465,52941853,52948080,52954804,52961629,52974832,52976769,52978367,52980543,52988136,53015043,53028071,53039046,53047937,53050970	Gene ID= ENSG00000116171.17 TPM= 1.93 Transcript Type= protein_coding
chr1	53062213	53085502	53062213	53085502	+	ENST00000312553.9@PODN	ENST00000312553.9	protein_coding	53062213,53069801,53071535,53074606,53075862,53077190,53077685,53078365,53080728,53081981,53084513	53062308,53070167,53071628,53074670,53075971,53077346,53077800,53079022,53080876,53082188,53085502	Gene ID= ENSG00000174348.13 TPM= 7.72 Transcript Type= protein_coding
chr1	53087179	53142632	53087179	53142632	-	ENST00000620347.4@SLC1A7	ENST00000620347.4	protein_coding	53142315,53134350,53114758,53105732,53103346,53093461,53092554,53090612,53089800,53088877,53087179	53142632,53134429,53114973,53105774,53103568,53093560,53092787,53090983,53089934,53088979,53088227	Gene ID= ENSG00000162383.11 TPM= 3.86 Transcript Type= protein_coding
chr1	53196429	53214197	53196429	53214197	+	ENST00000371486.3@CPT2	ENST00000371486.3	protein_coding	53196429,53200719,53202323,53210015,53213264	53197095,53200799,53202429,53211319,53214197	Gene ID= ENSG00000157184.6 TPM= 39.58 Transcript Type= protein_coding
chr1	53220087	53220576	53220087	53220576	-	ENST00000602807.1@C1orf123	ENST00000602807.1	protein_coding	53220087	53220576	Gene ID= ENSG00000162384.13 TPM= 2.9 Transcript Type= retained_intron
chr1	53214099	53220617	53214099	53220617	-	ENST00000294360.4@C1orf123	ENST00000294360.4	protein_coding	53220570,53220261,53218867,53218414,53218172,53216782,53215991,53214099	53220617,53220344,53218923,53218495,53218203,53216859,53216056,53214736	Gene ID= ENSG00000162384.13 TPM= 22.2 Transcript Type= protein_coding
chr1	53226892	53238610	53226892	53238610	-	ENST00000371470.7@MAGOH	ENST00000371470.7	protein_coding	53238361,53235577,53233542,53228872,53226892	53238610,53235635,53233652,53228954,53227144	Gene ID= ENSG00000162385.10 TPM= 13.51 Transcript Type= protein_coding
chr1	53765460	53838860	53765460	53838860	-	ENST00000371429.3@NDC1	ENST00000371429.3	protein_coding	53838205,53835500,53832490,53827999,53825798,53818971,53809695,53807656,53806425,53803928,53800693,53796899,53796689,53793229,53789133,53787158,53772329,53765460	53838860,53835620,53832591,53828173,53825936,53819079,53809746,53807791,53806517,53804009,53800848,53797144,53796804,53793279,53789196,53787258,53772489,53768033	Gene ID= ENSG00000058804.11 TPM= 4.83 Transcript Type= protein_coding
chr1	53851719	53889833	53851719	53889833	-	transcript4312.chr1.nic@YIPF1	transcript4312.chr1.nic	protein_coding	53889713,53889244,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889833,53889463,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 20.27 Transcript Type= NA
chr1	53851733	53889834	53851733	53889834	-	ENST00000072644.6@YIPF1	ENST00000072644.6	protein_coding	53889713,53889244,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53851733	53889834,53889463,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53852270	Gene ID= ENSG00000058799.14 TPM= 16.41 Transcript Type= protein_coding
chr1	53851719	53889801	53851719	53889801	-	transcript4316.chr1.nic@YIPF1	transcript4316.chr1.nic	protein_coding	53889713,53888907,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889801,53888986,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 2.9 Transcript Type= NA
chr1	53851733	53889801	53851733	53889801	-	transcript4319.chr1.nic@YIPF1	transcript4319.chr1.nic	protein_coding	53889713,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53851733	53889801,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53852270	Gene ID= ENSG00000058799.14 TPM= 2.9 Transcript Type= NA
chr1	53851719	53889733	53851719	53889733	-	ENST00000464950.6@YIPF1	ENST00000464950.6	protein_coding	53889713,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889733,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr1	53921561	53945929	53921561	53945929	-	ENST00000194214.9@HSPB11	ENST00000194214.9	protein_coding	53945555,53939985,53930039,53928372,53923904,53921561	53945929,53940097,53930145,53928440,53923947,53921767	Gene ID= ENSG00000081870.11 TPM= 1.93 Transcript Type= protein_coding
chr1	53921561	53946303	53921561	53946303	-	transcript4328.chr1.nnic@HSPB11	transcript4328.chr1.nnic	protein_coding	53946237,53939985,53930039,53928372,53923904,53921561	53946303,53940097,53930145,53928440,53923947,53921767	Gene ID= ENSG00000081870.11 TPM= 1.93 Transcript Type= NA
chr1	53946077	53968168	53946077	53968168	+	ENST00000371370.7@LRRC42	ENST00000371370.7	protein_coding	53946077,53947788,53951986,53958149,53960356,53962034,53962296,53966296,53967665	53946549,53947821,53952472,53958280,53960474,53962122,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 13.2 Transcript Type= protein_coding
chr1	53946352	53968168	53946352	53968168	+	transcript4323.chr1.nic@LRRC42	transcript4323.chr1.nic	protein_coding	53946352,53947862,53951986,53958149,53960356,53962034,53962296,53966296,53967665	53946549,53947981,53952472,53958280,53960474,53962122,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 3.54 Transcript Type= NA
chr1	53946353	53968168	53946353	53968168	+	ENST00000319223.8@LRRC42	ENST00000319223.8	protein_coding	53946353,53951986,53958149,53960356,53962034,53962296,53966296,53967665	53946549,53952472,53958280,53960474,53962122,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 12.23 Transcript Type= protein_coding
chr1	54031676	54053418	54031676	54053418	-	transcript4334.chr1.nnic@TMEM59	transcript4334.chr1.nnic	protein_coding	54053162,54047267,54045692,54043373,54041724,54040756,54036610,54031676	54053418,54047372,54045786,54043525,54041805,54040837,54036718,54032305	Gene ID= ENSG00000116209.11 TPM= 4.83 Transcript Type= NA
chr1	54031966	54053504	54031966	54053504	-	ENST00000371341.5@TMEM59	ENST00000371341.5	protein_coding	54053356,54047267,54045692,54043373,54041724,54040756,54036610,54031966	54053504,54047372,54045786,54043525,54041805,54040837,54036718,54032305	Gene ID= ENSG00000116209.11 TPM= 2.9 Transcript Type= protein_coding
chr1	54031676	54053465	54031676	54053465	-	transcript4339.chr1.nic@TMEM59	transcript4339.chr1.nic	protein_coding	54053356,54045692,54043373,54041724,54040756,54036610,54031676	54053465,54045786,54043525,54041805,54040837,54036718,54032305	Gene ID= ENSG00000116209.11 TPM= 3.86 Transcript Type= NA
chr1	54200136	54218381	54200136	54218381	+	transcript4346.chr1.nnic@MRPL37	transcript4346.chr1.nnic	protein_coding	54200136,54205018,54205295,54209946,54216141,54218172	54200589,54205201,54205410,54210131,54216344,54218381	Gene ID= ENSG00000116221.15 TPM= 31.37 Transcript Type= NA
chr1	54200167	54218383	54200167	54218383	+	ENST00000360840.9@MRPL37	ENST00000360840.9	protein_coding	54200167,54205018,54205295,54209946,54212501,54216141,54218172	54200589,54205201,54205410,54210131,54212658,54216344,54218383	Gene ID= ENSG00000116221.15 TPM= 123.08 Transcript Type= protein_coding
chr1	54225432	54356818	54225432	54356818	-	ENST00000326956.11@SSBP3	ENST00000326956.11	protein_coding	54356415,54281438,54257127,54251794,54251616,54243235,54242164,54241474,54240905,54239129,54228748,54228449,54228255,54225432	54356818,54281527,54257186,54251860,54251692,54243299,54242212,54241509,54240959,54239199,54228826,54228477,54228356,54227160	Gene ID= ENSG00000157216.15 TPM= 3.86 Transcript Type= processed_transcript
chr1	54548228	54610327	54548228	54610327	+	ENST00000343744.6@ACOT11	ENST00000343744.6	protein_coding	54548228,54584655,54585835,54592546,54593941,54594556,54597259,54599296,54601269,54602669,54603871,54604346,54605076,54607134,54607942,54608957	54548342,54584862,54585904,54592606,54594039,54594691,54597415,54599415,54601413,54602724,54603937,54604429,54605209,54607265,54608068,54610327	Gene ID= ENSG00000162390.17 TPM= 4.83 Transcript Type= protein_coding
chr1	54715822	54742657	54715822	54742657	+	ENST00000371281.3@TTC4	ENST00000371281.3	protein_coding	54715822,54716600,54717492,54721163,54722675,54728346,54731486,54733629,54737582,54741411	54716019,54716717,54717653,54721240,54722799,54728432,54731700,54733710,54737664,54742657	Gene ID= ENSG00000243725.6 TPM= 27.99 Transcript Type= protein_coding
chr1	54715821	54742308	54715821	54742308	+	transcript4359.chr1.nnic@TTC4	transcript4359.chr1.nnic	protein_coding	54715821,54716600,54717492,54721163,54722675,54728346,54731486,54737582,54741411	54716019,54716717,54717653,54721240,54722799,54728432,54731700,54737664,54742308	Gene ID= ENSG00000243725.6 TPM= 3.86 Transcript Type= NA
chr1	54756898	54764514	54756898	54764514	-	ENST00000371279.3@PARS2	ENST00000371279.3	protein_coding	54764461,54756898	54764514,54759190	Gene ID= ENSG00000162396.5 TPM= 8.69 Transcript Type= protein_coding
chr1	54849633	54883937	54849633	54883937	-	transcript4372.chr1.nic@DHCR24	transcript4372.chr1.nic	protein_coding	54883618,54875942,54875093,54871350,54865303,54854037,54853434,54849633	54883937,54876047,54875211,54871613,54865446,54854234,54853612,54852386	Gene ID= ENSG00000116133.11 TPM= 55.19 Transcript Type= NA
chr1	54849633	54887218	54849633	54887218	-	ENST00000371269.7@DHCR24	ENST00000371269.7	protein_coding	54886889,54883618,54875942,54875093,54871350,54865303,54854037,54853434,54849633	54887218,54883773,54876047,54875211,54871613,54865446,54854234,54853612,54852386	Gene ID= ENSG00000116133.11 TPM= 178.75 Transcript Type= protein_coding
chr1	55165981	55215390	55165981	55215390	-	transcript4381.chr1.nic@USP24	transcript4381.chr1.nic	protein_coding	55214790,55177967,55176376,55172377,55171556,55165981	55215390,55178132,55176443,55172520,55171678,55166603	Gene ID= ENSG00000162402.13 TPM= 2.9 Transcript Type= NA
chr1	55066359	55215113	55066359	55215113	-	ENST00000294383.6@USP24	ENST00000294383.6	protein_coding	55214790,55177967,55176376,55172377,55171556,55166568,55165885,55162199,55159611,55158878,55157256,55156948,55154671,55154371,55154119,55153870,55148463,55147649,55146929,55145998,55144127,55142979,55142742,55141616,55138944,55138608,55137806,55137515,55134328,55134070,55132545,55129477,55125663,55125320,55124469,55123447,55121436,55120596,55110185,55107239,55106146,55103876,55101584,55100839,55099771,55098476,55097943,55097598,55096952,55096498,55095255,55093937,55092821,55092023,55089627,55085942,55083772,55083272,55081322,55079538,55078538,55077235,55075457,55073828,55072786,55072317,55071814,55066359	55215113,55178132,55176443,55172520,55171678,55166603,55165950,55162264,55159685,55159036,55157370,55157051,55154778,55154466,55154280,55153917,55148570,55147798,55147060,55146109,55144203,55143119,55142795,55141731,55139010,55138718,55137904,55137688,55134413,55134163,55132700,55129574,55125758,55125548,55124628,55123602,55121506,55120756,55110246,55107430,55106263,55104020,55101703,55100964,55099869,55098558,55098084,55097717,55097172,55096622,55095396,55094087,55092916,55092126,55089740,55086038,55083888,55083364,55081424,55079659,55078651,55077300,55075523,55073906,55072861,55072403,55071924,55069107	Gene ID= ENSG00000162402.13 TPM= 10.62 Transcript Type= protein_coding
chr1	56482185	56579542	56482185	56579542	-	transcript4382.chr1.nic@PLPP3	transcript4382.chr1.nic	protein_coding	56578878,56536955,56524277,56523823,56511976,56496555,56482185	56579542,56537112,56524554,56523880,56512152,56496676,56483454	Gene ID= ENSG00000162407.8 TPM= 1.93 Transcript Type= NA
chr1	56494747	56579568	56494747	56579568	-	ENST00000371250.3@PLPP3	ENST00000371250.3	protein_coding	56578878,56536955,56524277,56523823,56511976,56494747	56579568,56537112,56524554,56523880,56512152,56496676	Gene ID= ENSG00000162407.8 TPM= 26.06 Transcript Type= protein_coding
chr1	56645220	56674467	56645220	56674467	+	transcript4394.chr1.nic@PRKAA2	transcript4394.chr1.nic	protein_coding	56645220,56674381	56645481,56674467	Gene ID= ENSG00000162409.10 TPM= 1.93 Transcript Type= NA
chr1	56645311	56648040	56645311	56648040	+	transcript4395.chr1.nnic@NA	transcript4395.chr1.nnic	NA	56645311	56648040	Gene ID= novel_gene_chr1_4396 TPM= 2.9 Transcript Type= NA
chr1	56707685	56713533	56707685	56713533	+	transcript4397.chr1.nnic@NA	transcript4397.chr1.nnic	NA	56707685	56713533	Gene ID= novel_gene_chr1_4398 TPM= 1.93 Transcript Type= NA
chr1	58480719	58546726	58480719	58546726	-	transcript4404.chr1.nic@OMA1	transcript4404.chr1.nic	protein_coding	58546664,58538795,58536513,58534158,58533953,58530601,58527261,58506060,58480719	58546726,58539310,58536741,58534331,58534060,58530729,58527335,58506209,58481174	Gene ID= ENSG00000162600.11 TPM= 7.24 Transcript Type= NA
chr1	58480719	58546800	58480719	58546800	-	ENST00000371226.7@OMA1	ENST00000371226.7	protein_coding	58546703,58538795,58536513,58534158,58533953,58530601,58527261,58506060,58480719	58546800,58539310,58536741,58534331,58534060,58530729,58527335,58506209,58481174	Gene ID= ENSG00000162600.11 TPM= 14.96 Transcript Type= protein_coding
chr1	58680589	58700112	58680589	58700112	-	transcript4412.chr1.nic@MYSM1	transcript4412.chr1.nic	protein_coding	58699985,58695129,58692861,58690340,58690226,58689038,58685153,58680589	58700112,58695207,58692931,58690417,58690249,58689116,58685251,58682545	Gene ID= ENSG00000162601.9 TPM= 1.93 Transcript Type= NA
chr1	58654739	58700092	58654739	58700092	-	ENST00000472487.5@MYSM1	ENST00000472487.5	protein_coding	58699985,58695129,58692861,58690340,58690226,58689038,58685153,58681785,58676926,58675477,58673573,58671870,58668984,58668632,58667847,58667038,58665499,58661406,58661170,58654739	58700092,58695207,58692931,58690417,58690249,58689116,58685251,58682545,58677056,58675580,58673650,58671958,58669038,58668682,58667921,58667226,58665631,58661511,58661227,58660155	Gene ID= ENSG00000162601.9 TPM= 4.83 Transcript Type= protein_coding
chr1	58780788	58784327	58780788	58784327	-	ENST00000371222.3@JUN	ENST00000371222.3	protein_coding	58780788	58784327	Gene ID= ENSG00000177606.6 TPM= 64.68 Transcript Type= protein_coding
chr1	59296638	59762724	59296638	59762724	+	transcript4428.chr1.nic@FGGY	transcript4428.chr1.nic	protein_coding	59296638,59321536,59339958,59346247,59378749,59456961,59512311,59554124,59607803,59625988,59638228,59660219,59667283,59674039,59757931,59762503	59296907,59321750,59340069,59346398,59378837,59457076,59512439,59554227,59607910,59626049,59638375,59660293,59667403,59674133,59757992,59762724	Gene ID= ENSG00000172456.17 TPM= 5.31 Transcript Type= NA
chr1	59296991	59762730	59296991	59762730	+	ENST00000303721.11@FGGY	ENST00000303721.11	protein_coding	59296991,59321536,59339958,59346247,59378749,59456961,59512311,59554124,59607803,59625988,59638228,59660219,59667283,59674039,59757931,59762503	59297150,59321750,59340069,59346398,59378837,59457076,59512439,59554227,59607910,59626049,59638375,59660293,59667403,59674133,59757992,59762730	Gene ID= ENSG00000172456.17 TPM= 2.41 Transcript Type= protein_coding
chr1	59296755	59762724	59296755	59762724	+	transcript4433.chr1.nic@FGGY	transcript4433.chr1.nic	protein_coding	59296755,59339958,59346247,59378749,59456961,59512311,59554124,59607803,59625988,59638228,59660219,59667283,59674039,59757931,59762503	59296907,59340069,59346398,59378837,59457076,59512439,59554227,59607910,59626049,59638375,59660293,59667403,59674133,59757992,59762724	Gene ID= ENSG00000172456.17 TPM= 2.41 Transcript Type= NA
chr1	59697673	59762724	59697673	59762724	+	transcript4444.chr1.nnic@FGGY	transcript4444.chr1.nnic	protein_coding	59697673,59757931,59762503	59697740,59757992,59762724	Gene ID= ENSG00000172456.17 TPM= 3.38 Transcript Type= NA
chr1	59893308	59926790	59893308	59926790	-	ENST00000371204.3@CYP2J2	ENST00000371204.3	protein_coding	59926537,59915938,59912162,59911608,59909784,59907786,59904871,59900965,59893308	59926790,59916100,59912311,59911768,59909960,59907927,59905058,59901103,59893829	Gene ID= ENSG00000134716.9 TPM= 3.86 Transcript Type= protein_coding
chr1	61082308	61462793	61082308	61462793	+	ENST00000403491.7@NFIA	ENST00000403491.7	protein_coding	61082308,61088149,61277520,61332512,61352450,61359147,61383237,61404104,61406562,61426465,61455303	61082818,61088680,61277585,61332586,61352567,61359274,61383365,61404282,61406727,61426556,61462793	Gene ID= ENSG00000162599.15 TPM= 8.69 Transcript Type= protein_coding
chr1	61082621	61456394	61082621	61456394	+	ENST00000371187.7@NFIA	ENST00000371187.7	protein_coding	61082621,61088149,61277520,61332512,61352450,61359147,61383237,61404104,61406562,61455303	61082818,61088680,61277585,61332586,61352567,61359274,61383365,61404282,61406727,61456394	Gene ID= ENSG00000162599.15 TPM= 6.76 Transcript Type= protein_coding
chr1	61681046	61725149	61681046	61725149	-	transcript4457.chr1.nic@TM2D1	transcript4457.chr1.nic	protein_coding	61724957,61723713,61709329,61700934,61694697,61686792,61683417,61681046	61725149,61723786,61709437,61701025,61694770,61686921,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 6.76 Transcript Type= NA
chr1	61681046	61725141	61681046	61725141	-	transcript4459.chr1.nic@TM2D1	transcript4459.chr1.nic	protein_coding	61724920,61723713,61709329,61700934,61694697,61683417,61681046	61725141,61723772,61709437,61701025,61694770,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 2.9 Transcript Type= NA
chr1	61681046	61725149	61681046	61725149	-	transcript4465.chr1.nnic@TM2D1	transcript4465.chr1.nnic	protein_coding	61724957,61723713,61709329,61700934,61683417,61681046	61725149,61723786,61709437,61701025,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 4.83 Transcript Type= NA
chr1	61681046	61725149	61681046	61725149	-	transcript4466.chr1.nic@TM2D1	transcript4466.chr1.nic	protein_coding	61724957,61723713,61709329,61700934,61694697,61681046	61725149,61723786,61709437,61701025,61694770,61683546	Gene ID= ENSG00000162604.12 TPM= 6.76 Transcript Type= NA
chr1	61742378	62117393	61742378	62117393	+	transcript4471.chr1.nnic@PATJ	transcript4471.chr1.nnic	protein_coding	61742378,61762858,61763013,61766279,61769283,61771431,61775206,61787754,61791348,61795467,61797287,61801623,61805448,61822945,61827422,61833654,61856030,61861551,61864238,61875243,61884237,61899583,61901282,61908372,61914587,61927730,61990168,62017856,62037977,62050966,62079450,62084515,62100319,62108437,62114053,62116532,62117132	61742555,61762914,61763179,61766473,61769422,61771626,61775334,61787972,61791447,61795558,61797428,61801769,61805524,61823079,61827583,61833785,61856239,61861667,61864633,61875366,61884408,61899654,61901459,61908482,61914664,61927829,61990364,62017947,62038049,62051058,62079567,62084648,62100360,62108520,62114246,62116679,62117393	Gene ID= ENSG00000132849.19 TPM= 1.93 Transcript Type= NA
chr1	61742430	61991774	61742430	61991774	+	transcript4473.chr1.nnic@PATJ	transcript4473.chr1.nnic	protein_coding	61742430,61762858,61763013,61766279,61769283,61771431,61775206,61787754,61791348,61795467,61797287,61801623,61805448,61808474,61822945,61827422,61833654,61856030,61861551,61864238,61875243,61884237,61899583,61901282,61908372,61914587,61927730,61990168,61991045	61742555,61762914,61763179,61766473,61769422,61771626,61775334,61787972,61791447,61795558,61797428,61801769,61805524,61808530,61823079,61827583,61833785,61856239,61861667,61864633,61875366,61884408,61899654,61901459,61908482,61914664,61927829,61990364,61991774	Gene ID= ENSG00000132849.19 TPM= 1.93 Transcript Type= NA
chr1	61742434	61991779	61742434	61991779	+	transcript4474.chr1.nic@PATJ	transcript4474.chr1.nic	protein_coding	61742434,61762858,61763013,61766279,61769283,61771431,61775206,61787754,61791348,61795467,61797287,61801623,61805448,61808474,61822945,61827422,61833654,61856030,61861551,61864238,61875243,61884237,61899583,61901282,61908372,61914587,61927730,61990168,61991482	61742555,61762914,61763179,61766473,61769422,61771626,61775334,61787972,61791447,61795558,61797428,61801769,61805524,61808530,61823079,61827583,61833785,61856239,61861667,61864633,61875366,61884408,61899654,61901459,61908482,61914664,61927829,61990364,61991779	Gene ID= ENSG00000132849.19 TPM= 1.93 Transcript Type= NA
chr1	61742477	61918076	61742477	61918076	+	ENST00000316485.11@PATJ	ENST00000316485.11	protein_coding	61742477,61762858,61763013,61766279,61769283,61771431,61775206,61787754,61791348,61795467,61797287,61801623,61805448,61808474,61822945,61827422,61833654,61856030,61861551,61864238,61875243,61884237,61899583,61901282,61908372,61918024	61742555,61762914,61763179,61766473,61769422,61771626,61775334,61787972,61791447,61795558,61797428,61801769,61805524,61808530,61823079,61827583,61833785,61856239,61861667,61864633,61875366,61884408,61899654,61901459,61908480,61918076	Gene ID= ENSG00000132849.19 TPM= 1.93 Transcript Type= protein_coding
chr1	62436655	62451804	62436655	62451804	+	ENST00000339950.4@USP1	ENST00000339950.4	protein_coding	62436655,62439799,62441488,62442195,62443159,62444738,62447341,62448465,62450246	62437400,62440037,62441608,62442299,62443319,62445429,62447511,62448666,62451804	Gene ID= ENSG00000162607.12 TPM= 11.58 Transcript Type= protein_coding
chr1	63320884	63322458	63320884	63322458	-	ENST00000449386.5@FOXD3-AS1	ENST00000449386.5	antisense_RNA	63322316,63321367,63320884	63322458,63321463,63321190	Gene ID= ENSG00000230798.5 TPM= 3.86 Transcript Type= antisense_RNA
chr1	63367590	63438562	63367590	63438562	+	ENST00000371108.8@ALG6	ENST00000371108.8	protein_coding	63367590,63370771,63396513,63402254,63404453,63406317,63407062,63411146,63411926,63414061,63415873,63419370,63428733,63428928,63436823	63367687,63371059,63396597,63402343,63404541,63406399,63407126,63411331,63412061,63414146,63415957,63419440,63428801,63429126,63438562	Gene ID= ENSG00000088035.15 TPM= 3.86 Transcript Type= protein_coding
chr1	63592264	63594216	63592264	63594216	-	transcript4533.chr1.nnic@NA	transcript4533.chr1.nnic	NA	63592264	63594216	Gene ID= novel_gene_chr1_4534 TPM= 5.79 Transcript Type= NA
chr1	63593276	63660245	63593276	63660245	+	ENST00000371084.7@PGM1	ENST00000371084.7	protein_coding	63593276,63629425,63629942,63631657,63634829,63636234,63638685,63648517,63651669,63654332,63659586	63593734,63629587,63630088,63631782,63635019,63636388,63638800,63648652,63651852,63654466,63660245	Gene ID= ENSG00000079739.15 TPM= 928.63 Transcript Type= protein_coding
chr1	63623093	63660221	63623093	63660221	+	ENST00000371083.4@PGM1	ENST00000371083.4	protein_coding	63623093,63629425,63629942,63631657,63634829,63636234,63638685,63648517,63651669,63654332,63659586	63623760,63629587,63630088,63631782,63635019,63636388,63638800,63648652,63651852,63654466,63660221	Gene ID= ENSG00000079739.15 TPM= 5.07 Transcript Type= protein_coding
chr1	64744866	64833232	64744866	64833232	+	transcript4553.chr1.nic@RAVER2	transcript4553.chr1.nic	protein_coding	64744866,64768656,64777623,64781380,64789388,64802976,64804773,64804991,64812738,64814704,64830839	64745421,64768722,64778092,64781571,64789514,64803061,64804838,64805105,64812849,64814840,64833232	Gene ID= ENSG00000162437.14 TPM= 1.93 Transcript Type= NA
chr1	64745095	64833232	64745095	64833232	+	ENST00000371072.8@RAVER2	ENST00000371072.8	protein_coding	64745095,64768656,64777623,64781380,64789388,64802976,64804773,64804991,64807206,64812738,64814704,64830839	64745421,64768722,64778092,64781571,64789514,64803061,64804838,64805105,64807474,64812849,64814840,64833232	Gene ID= ENSG00000162437.14 TPM= 4.83 Transcript Type= protein_coding
chr1	64833229	64966570	64833229	64966570	-	transcript4541.chr1.nnic@JAK1	transcript4541.chr1.nnic	protein_coding	64966333,64956934,64886259,64883277,64879025,64873370,64869311,64866866,64864787,64860105,64857656,64855509,64850804,64847532,64846649,64845513,64844754,64844064,64841451,64841245,64839603,64838465,64837932,64836098,64835396,64833229	64966570,64957017,64886341,64883475,64879148,64873523,64869474,64867208,64864972,64860262,64857779,64855698,64850910,64847675,64846736,64845640,64844889,64844215,64841601,64841339,64839795,64838589,64838104,64836215,64835506,64834657	Gene ID= ENSG00000162434.11 TPM= 13.51 Transcript Type= NA
chr1	64833229	64945898	64833229	64945898	-	transcript4543.chr1.nnic@JAK1	transcript4543.chr1.nnic	protein_coding	64945615,64886259,64883277,64879025,64873370,64869311,64866866,64864787,64860105,64857656,64855509,64850804,64847532,64846649,64845513,64844754,64844064,64841451,64841245,64839603,64838465,64837932,64836098,64835396,64833229	64945898,64886341,64883475,64879148,64873523,64869474,64867208,64864972,64860262,64857779,64855698,64850910,64847675,64846736,64845640,64844889,64844215,64841601,64841339,64839795,64838589,64838104,64836215,64835506,64834657	Gene ID= ENSG00000162434.11 TPM= 6.76 Transcript Type= NA
chr1	64864928	64966569	64864928	64966569	-	transcript4556.chr1.nic@JAK1	transcript4556.chr1.nic	protein_coding	64966333,64886259,64883277,64879025,64873370,64869311,64866866,64864928	64966569,64886341,64883475,64879148,64873523,64869474,64867208,64864972	Gene ID= ENSG00000162434.11 TPM= 6.76 Transcript Type= NA
chr1	64833229	64966504	64833229	64966504	-	ENST00000342505.4@JAK1	ENST00000342505.4	protein_coding	64966333,64886259,64883277,64879025,64873370,64869311,64866866,64864787,64860105,64857656,64855509,64850804,64847532,64846649,64845513,64844754,64844064,64841451,64841245,64839603,64838465,64837932,64836098,64835396,64833229	64966504,64886341,64883475,64879148,64873523,64869474,64867208,64864972,64860262,64857779,64855698,64850910,64847675,64846736,64845640,64844889,64844215,64841601,64841339,64839795,64838589,64838104,64836215,64835506,64834657	Gene ID= ENSG00000162434.11 TPM= 208.51 Transcript Type= protein_coding
chr1	65420587	65436007	65420587	65436007	+	ENST00000371065.8@LEPROT	ENST00000371065.8	protein_coding	65420587,65425303,65429862,65431803	65420740,65425378,65430048,65436007	Gene ID= ENSG00000213625.8 TPM= 27.99 Transcript Type= protein_coding
chr1	66332004	66374579	66332004	66374579	+	ENST00000371045.9@PDE4B	ENST00000371045.9	protein_coding	66332004,66355527,66361615,66363168,66363407,66365667,66367696,66367943,66368787,66372313	66332620,66355620,66361793,66363266,66363571,66365766,66367850,66368065,66368969,66374579	Gene ID= ENSG00000184588.17 TPM= 10.62 Transcript Type= protein_coding
chr1	66365435	66370178	66365435	66370178	+	transcript4581.chr1.nic@PDE4B	transcript4581.chr1.nic	protein_coding	66365435,66367696,66367943	66365766,66367850,66370178	Gene ID= ENSG00000184588.17 TPM= 1.93 Transcript Type= NA
chr1	66924957	66988031	66924957	66988031	+	ENST00000357692.6@MIER1	ENST00000357692.6	protein_coding	66924957,66926142,66928887,66940028,66946150,66958059,66958851,66959679,66963088,66970808,66971655,66972897,66976595,66981779,66984572	66925095,66926242,66928963,66940052,66946295,66958220,66958983,66959743,66963160,66970959,66971736,66972991,66976722,66981918,66988031	Gene ID= ENSG00000198160.14 TPM= 7.24 Transcript Type= protein_coding
chr1	66925341	66963147	66925341	66963147	+	transcript4594.chr1.nnic@MIER1	transcript4594.chr1.nnic	protein_coding	66925341,66926142,66928887,66940028,66946150,66958059,66958851,66959679,66963088	66925381,66926242,66928963,66940052,66946295,66958220,66958983,66959743,66963147	Gene ID= ENSG00000198160.14 TPM= 1.93 Transcript Type= NA
chr1	66930243	66988030	66930243	66988030	+	ENST00000355356.3@MIER1	ENST00000355356.3	protein_coding	66930243,66940028,66946150,66958059,66958851,66959679,66963088,66970808,66971655,66972897,66976595,66981779,66984572	66930400,66940052,66946295,66958220,66958983,66959743,66963160,66970959,66971736,66972991,66976722,66981918,66988030	Gene ID= ENSG00000198160.14 TPM= 11.1 Transcript Type= protein_coding
chr1	67411038	67430386	67411038	67430386	-	ENST00000370995.6@SERBP1	ENST00000370995.6	protein_coding	67429988,67426135,67425083,67424888,67424200,67420009,67415166,67411038	67430386,67426285,67425223,67424977,67424322,67420186,67415339,67413263	Gene ID= ENSG00000142864.14 TPM= 109.08 Transcript Type= protein_coding
chr1	67412867	67430372	67412867	67430372	-	ENST00000370990.5@SERBP1	ENST00000370990.5	protein_coding	67429988,67426135,67425083,67424888,67424200,67420009,67415166,67412867	67430372,67426285,67425223,67424959,67424322,67420186,67415339,67413263	Gene ID= ENSG00000142864.14 TPM= 29.92 Transcript Type= protein_coding
chr1	67685061	67688338	67685061	67688338	+	ENST00000370986.8@GADD45A	ENST00000370986.8	protein_coding	67685061,67686025,67686350,67687661	67685538,67686126,67686587,67688338	Gene ID= ENSG00000116717.11 TPM= 103.29 Transcript Type= protein_coding
chr1	67701466	67833467	67701466	67833467	-	ENST00000370982.3@GNG12	ENST00000370982.3	protein_coding	67833344,67777458,67707594,67701466	67833467,67777507,67707712,67705576	Gene ID= ENSG00000172380.5 TPM= 5.79 Transcript Type= protein_coding
chr1	70144805	70205582	70144805	70205582	-	transcript4641.chr1.nnic@LRRC40	transcript4641.chr1.nnic	protein_coding	70205390,70184785,70181086,70178851,70175810,70173622,70173465,70159330,70155689,70152433,70151128,70148487,70144805	70205582,70184914,70181209,70178993,70175982,70173709,70173510,70159438,70155796,70152543,70151205,70148672,70145905	Gene ID= ENSG00000066557.5 TPM= 3.86 Transcript Type= NA
chr1	70144805	70205620	70144805	70205620	-	ENST00000370952.3@LRRC40	ENST00000370952.3	protein_coding	70205390,70189092,70187265,70184785,70181086,70178851,70175810,70173622,70173465,70159330,70155689,70152433,70151128,70148487,70144805	70205620,70189273,70187338,70184914,70181209,70178993,70175982,70173709,70173510,70159438,70155796,70152543,70151205,70148672,70145905	Gene ID= ENSG00000066557.5 TPM= 29.92 Transcript Type= protein_coding
chr1	70205682	70251617	70205682	70251617	+	ENST00000370951.5@SRSF11	ENST00000370951.5	protein_coding	70205682,70221615,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250611	70205780,70221839,70228555,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70251617	Gene ID= ENSG00000116754.13 TPM= 1.93 Transcript Type= protein_coding
chr1	70221365	70252001	70221365	70252001	+	transcript4659.chr1.nic@SRSF11	transcript4659.chr1.nic	protein_coding	70221365,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250608	70221839,70228555,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70252001	Gene ID= ENSG00000116754.13 TPM= 2.9 Transcript Type= NA
chr1	70221461	70228944	70221461	70228944	+	transcript4670.chr1.nic@SRSF11	transcript4670.chr1.nic	protein_coding	70221461,70228422	70221839,70228944	Gene ID= ENSG00000116754.13 TPM= 2.9 Transcript Type= NA
chr1	70273999	70354736	70273999	70354736	-	transcript4680.chr1.nic@ANKRD13C	transcript4680.chr1.nic	protein_coding	70353979,70336058,70324853,70315481,70313745,70306224,70300764,70296130,70292388,70276765,70273999	70354736,70336099,70324957,70315566,70313790,70306290,70300908,70296261,70292549,70276844,70274818	Gene ID= ENSG00000118454.12 TPM= 1.93 Transcript Type= NA
chr1	70260588	70354722	70260588	70354722	-	ENST00000370944.8@ANKRD13C	ENST00000370944.8	protein_coding	70353979,70336058,70324853,70315481,70313745,70306224,70300764,70296130,70292388,70276765,70274720,70270856,70260588	70354722,70336099,70324957,70315566,70313790,70306290,70300908,70296261,70292549,70276844,70274818,70270956,70262847	Gene ID= ENSG00000118454.12 TPM= 8.69 Transcript Type= protein_coding
chr1	70352808	70354722	70352808	70354722	-	transcript4688.chr1.nnic@NA	transcript4688.chr1.nnic	NA	70352808	70354722	Gene ID= novel_gene_chr1_4689 TPM= 2.9 Transcript Type= NA
chr1	71063291	71081297	71063291	71081297	-	ENST00000370920.7@ZRANB2	ENST00000370920.7	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71066776,71063291	71081297,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934,71065137	Gene ID= ENSG00000132485.13 TPM= 42.16 Transcript Type= protein_coding
chr1	71063297	71081057	71063297	71081057	-	transcript4694.chr1.nic@ZRANB2	transcript4694.chr1.nic	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71069276,71066776,71065678,71063297	71081057,71078708,71078565,71076877,71072548,71072255,71070996,71066934,71065752,71065137	Gene ID= ENSG00000132485.13 TPM= 3.54 Transcript Type= NA
chr1	71063291	71081057	71063291	71081057	-	transcript4696.chr1.nic@ZRANB2	transcript4696.chr1.nic	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71069276,71066776,71063291	71081057,71078708,71078565,71076877,71072548,71072255,71070996,71066934,71065137	Gene ID= ENSG00000132485.13 TPM= 2.58 Transcript Type= NA
chr1	71068798	71081057	71068798	71081057	-	transcript4699.chr1.nic@ZRANB2	transcript4699.chr1.nic	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71068798	71081057,71078708,71078565,71076877,71072548,71072255,71070996	Gene ID= ENSG00000132485.13 TPM= 2.9 Transcript Type= NA
chr1	71063337	71081011	71063337	71081011	-	ENST00000254821.10@ZRANB2	ENST00000254821.10	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71066776,71065678,71063337	71081011,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934,71065752,71065137	Gene ID= ENSG00000132485.13 TPM= 23.17 Transcript Type= protein_coding
chr1	71403880	71935314	71403880	71935314	-	transcript4703.chr1.nic@NEGR1	transcript4703.chr1.nic	protein_coding	71935079,71776172,71698008,71611026,71592817,71403880	71935314,71776297,71698139,71611146,71592968,71407570	Gene ID= ENSG00000172260.14 TPM= 1.93 Transcript Type= NA
chr1	74198212	74207234	74198212	74207234	+	ENST00000370898.7@FPGT	ENST00000370898.7	protein_coding	74198212,74199664,74201318,74204391	74198360,74199831,74201410,74207234	Gene ID= ENSG00000254685.6 TPM= 5.79 Transcript Type= protein_coding
chr1	74733156	74766674	74733156	74766674	+	ENST00000370867.7@TYW3	ENST00000370867.7	protein_coding	74733156,74736542,74738690,74748751,74752292,74763894	74733418,74736622,74738788,74748822,74752425,74766674	Gene ID= ENSG00000162623.15 TPM= 2.9 Transcript Type= protein_coding
chr1	75724351	75763679	75724351	75763679	+	ENST00000370841.8@ACADM	ENST00000370841.8	protein_coding	75724351,75728401,75732644,75732853,75733528,75734791,75739980,75745806,75749419,75750451,75761122,75762692	75724817,75728488,75732741,75732922,75733628,75734871,75740110,75745914,75749559,75750546,75761370,75763679	Gene ID= ENSG00000117054.13 TPM= 170.38 Transcript Type= protein_coding
chr1	75724347	75763679	75724347	75763679	+	ENST00000541113.5@ACADM	ENST00000541113.5	protein_coding	75724347,75732644,75732853,75733528,75734791,75739980,75745806,75749419,75750451,75761122,75762692	75724817,75732741,75732922,75733628,75734871,75740110,75745914,75749559,75750546,75761370,75763679	Gene ID= ENSG00000117054.13 TPM= 1.93 Transcript Type= protein_coding
chr1	75786171	75795079	75786171	75795079	+	transcript4743.chr1.nnic@RABGGTB	transcript4743.chr1.nnic	protein_coding	75786171,75787497,75788818,75789159,75789952,75791285,75791461,75792181,75794084,75794510	75786274,75787604,75788862,75789356,75790057,75791337,75791571,75792306,75794233,75795079	Gene ID= ENSG00000137955.15 TPM= 5.79 Transcript Type= NA
chr1	75786201	75795079	75786201	75795079	+	ENST00000319942.7@RABGGTB	ENST00000319942.7	protein_coding	75786201,75787497,75789159,75789952,75791285,75791461,75792181,75794084,75794510	75786274,75787604,75789356,75790057,75791337,75791571,75792306,75794233,75795079	Gene ID= ENSG00000137955.15 TPM= 27.99 Transcript Type= protein_coding
chr1	76074719	76634601	76074719	76634601	+	ENST00000328299.3@ST6GALNAC3	ENST00000328299.3	protein_coding	76074719,76313805,76412008,76627452,76628620	76074884,76313999,76412417,76627559,76634601	Gene ID= ENSG00000184005.10 TPM= 6.76 Transcript Type= protein_coding
chr1	77088990	77219426	77088990	77219426	-	ENST00000370812.7@PIGK	ENST00000370812.7	protein_coding	77219310,77210436,77206640,77169260,77166719,77163846,77161594,77161295,77154449,77122275,77088990	77219426,77210489,77206731,77169395,77166830,77163942,77161711,77161405,77154621,77122359,77092490	Gene ID= ENSG00000142892.14 TPM= 3.86 Transcript Type= protein_coding
chr1	77129114	77129668	77129114	77129668	+	ENST00000471722.1@AC113935.1	ENST00000471722.1	processed_pseudogene	77129114	77129668	Gene ID= ENSG00000226084.5 TPM= 2.9 Transcript Type= processed_pseudogene
chr1	77564500	77682658	77564500	77682658	-	ENST00000370801.7@ZZZ3	ENST00000370801.7	protein_coding	77682585,77641522,77641384,77639449,77631850,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564500	77682658,77641655,77641446,77639602,77633405,77584655,77582126,77581891,77581069,77579628,77578869,77576220,77568466,77566181,77565784	Gene ID= ENSG00000036549.12 TPM= 1.77 Transcript Type= protein_coding
chr1	77564506	77683466	77564506	77683466	-	transcript4778.chr1.nic@ZZZ3	transcript4778.chr1.nic	protein_coding	77683262,77641522,77641384,77639449,77631850,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564506	77683466,77641655,77641446,77639602,77633405,77584655,77582126,77581891,77581069,77579628,77578869,77576220,77568466,77566181,77565784	Gene ID= ENSG00000036549.12 TPM= 3.7 Transcript Type= NA
chr1	77564506	77683466	77564506	77683466	-	transcript4781.chr1.nnic@ZZZ3	transcript4781.chr1.nnic	protein_coding	77683262,77641522,77641384,77584767,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564506	77683466,77641655,77641446,77584829,77584655,77582126,77581888,77581069,77579628,77578869,77576220,77568466,77566181,77565784	Gene ID= ENSG00000036549.12 TPM= 2.25 Transcript Type= NA
chr1	77695991	77759852	77695991	77759852	-	ENST00000370793.5@USP33	ENST00000370793.5	protein_coding	77759643,77745421,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695991	77759852,77745599,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 5.15 Transcript Type= protein_coding
chr1	77695991	77759876	77695991	77759876	-	transcript4800.chr1.nic@USP33	transcript4800.chr1.nic	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695991	77759876,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721901,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 10.62 Transcript Type= NA
chr1	77695991	77759741	77695991	77759741	-	transcript4803.chr1.nnic@USP33	transcript4803.chr1.nnic	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695991	77759741,77741748,77741429,77740939,77739417,77736158,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 2.25 Transcript Type= NA
chr1	77711652	77759814	77711652	77759814	-	transcript4809.chr1.nic@USP33	transcript4809.chr1.nic	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711652	77759814,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721901,77721205,77718641,77718047,77715868,77714783,77713281,77711855	Gene ID= ENSG00000077254.14 TPM= 1.93 Transcript Type= NA
chr1	77695987	77759852	77695987	77759852	-	ENST00000370794.7@USP33	ENST00000370794.7	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695987	77759852,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 29.28 Transcript Type= protein_coding
chr1	77779624	77878421	77779624	77878421	+	ENST00000370791.7@MIGA1	ENST00000370791.7	protein_coding	77779624,77783238,77801331,77803270,77806975,77813734,77815108,77843307,77858938,77859314,77860040,77861224,77863894,77866338,77873004,77874846	77779736,77783351,77801508,77803406,77807101,77813867,77815231,77843407,77859056,77859386,77860126,77861322,77864028,77866391,77873120,77878421	Gene ID= ENSG00000180488.14 TPM= 1.93 Transcript Type= protein_coding
chr1	77868921	77870391	77868921	77870391	-	transcript4943.chr1.nnic@NA	transcript4943.chr1.nnic	NA	77868921	77870391	Gene ID= novel_gene_chr1_4944 TPM= 1.93 Transcript Type= NA
chr1	77887680	77889607	77887680	77889607	-	transcript4938.chr1.nic@NEXN-AS1	transcript4938.chr1.nic	antisense_RNA	77889468,77887680	77889607,77889268	Gene ID= ENSG00000235927.4 TPM= 22.2 Transcript Type= NA
chr1	77888594	77943247	77888594	77943247	+	transcript4832.chr1.nic@NEXN	transcript4832.chr1.nic	protein_coding	77888594,77916055,77917566,77917960,77918125,77926414,77926716,77929316,77933282,77935823,77942023,77942461,77942900	77888759,77916133,77917757,77918038,77918273,77926611,77926892,77929504,77933479,77936044,77942208,77942818,77943247	Gene ID= ENSG00000162614.18 TPM= 15.52 Transcript Type= NA
chr1	77888662	77935919	77888662	77935919	+	ENST00000440324.5@NEXN	ENST00000440324.5	protein_coding	77888662,77916055,77917566,77917960,77918125,77926414,77926716,77929316,77933282,77935823	77888759,77916133,77917757,77918038,77918273,77926611,77926892,77929504,77933479,77935919	Gene ID= ENSG00000162614.18 TPM= 25.14 Transcript Type= protein_coding
chr1	77888628	77943224	77888628	77943224	+	ENST00000334785.11@NEXN	ENST00000334785.11	protein_coding	77888628,77916055,77917566,77917960,77918125,77925188,77926414,77926716,77929316,77933282,77935823,77942023,77942461	77888759,77916133,77917757,77918038,77918273,77925229,77926611,77926892,77929504,77933479,77936044,77942208,77943224	Gene ID= ENSG00000162614.18 TPM= 2.93 Transcript Type= protein_coding
chr1	77948405	77979135	77948405	77979135	-	transcript4816.chr1.nic@FUBP1	transcript4816.chr1.nic	protein_coding	77978885,77969925,77969022,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948405	77979135,77970015,77969084,77968203,77967666,77967098,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774	Gene ID= ENSG00000162613.16 TPM= 4.66 Transcript Type= NA
chr1	77948405	77979135	77948405	77979135	-	transcript4818.chr1.nic@FUBP1	transcript4818.chr1.nic	protein_coding	77978885,77969925,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948405	77979135,77970015,77968203,77967666,77967098,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774	Gene ID= ENSG00000162613.16 TPM= 8.52 Transcript Type= NA
chr1	77948405	77979086	77948405	77979086	-	ENST00000370768.6@FUBP1	ENST00000370768.6	protein_coding	77978885,77969925,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948405	77979086,77970015,77968203,77967666,77967101,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774	Gene ID= ENSG00000162613.16 TPM= 18.82 Transcript Type= protein_coding
chr1	78004854	78017964	78004854	78017964	+	ENST00000370763.5@DNAJB4	ENST00000370763.5	protein_coding	78004854,78013051,78016014	78005321,78013619,78017964	Gene ID= ENSG00000162616.8 TPM= 58.88 Transcript Type= protein_coding
chr1	78004941	78007585	78004941	78007585	+	transcript4939.chr1.nnic@NA	transcript4939.chr1.nnic	NA	78004941	78007585	Gene ID= novel_gene_chr1_4940 TPM= 1.93 Transcript Type= NA
chr1	78024304	78025168	78024304	78025168	+	transcript4945.chr1.nnic@NA	transcript4945.chr1.nnic	NA	78024304	78025168	Gene ID= novel_gene_chr1_4946 TPM= 1.93 Transcript Type= NA
chr1	78649831	78664078	78649831	78664078	+	ENST00000370747.8@IFI44	ENST00000370747.8	protein_coding	78649831,78650186,78654243,78655014,78655362,78659312,78660554,78662704,78663765	78649905,78650652,78654279,78655209,78655511,78659483,78660654,78662878,78664078	Gene ID= ENSG00000137965.10 TPM= 1.93 Transcript Type= protein_coding
chr1	78889764	79006718	78889764	79006718	-	ENST00000370742.3@ADGRL4	ENST00000370742.3	protein_coding	79006633,79005070,78946274,78939188,78938100,78937807,78936295,78926886,78921613,78920183,78917830,78917634,78893098,78891524,78889764	79006718,79005219,78946426,78939258,78938279,78937990,78936411,78927091,78921786,78920386,78918050,78917700,78893189,78891692,78891216	Gene ID= ENSG00000162618.13 TPM= 1.93 Transcript Type= protein_coding
chr1	84078060	84080644	84078060	84080644	+	transcript4959.chr1.nnic@NA	transcript4959.chr1.nnic	NA	84078060	84080644	Gene ID= novel_gene_chr1_4960 TPM= 2.9 Transcript Type= NA
chr1	84498325	84506169	84498325	84506169	-	transcript4977.chr1.nnic@GNG5	transcript4977.chr1.nnic	protein_coding	84506011,84498325	84506169,84498548	Gene ID= ENSG00000174021.10 TPM= 3.86 Transcript Type= NA
chr1	84498325	84506565	84498325	84506565	-	ENST00000370645.8@GNG5	ENST00000370645.8	protein_coding	84506436,84506011,84501826,84498325	84506565,84506301,84501970,84498548	Gene ID= ENSG00000174021.10 TPM= 230.23 Transcript Type= protein_coding
chr1	84554853	84574421	84554853	84574421	-	ENST00000370625.1@CTBS	ENST00000370625.1	protein_coding	84573916,84570582,84569931,84565841,84563735,84563257,84554853	84574421,84570720,84570139,84566012,84563832,84563418,84555199	Gene ID= ENSG00000117151.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr1	85180706	85201073	85180706	85201073	-	transcript4987.chr1.nnic@SYDE2	transcript4987.chr1.nnic	protein_coding	85200252,85190576,85180706	85201073,85190752,85181296	Gene ID= ENSG00000097096.8 TPM= 1.93 Transcript Type= NA
chr1	85249953	85259672	85249953	85259672	-	ENST00000294661.8@C1orf52	ENST00000294661.8	protein_coding	85259358,85258935,85258524,85249953	85259672,85259061,85258722,85252702	Gene ID= ENSG00000162642.13 TPM= 9.65 Transcript Type= processed_transcript
chr1	85251968	85259642	85251968	85259642	-	ENST00000471115.5@C1orf52	ENST00000471115.5	protein_coding	85259358,85258524,85251968	85259642,85258722,85252702	Gene ID= ENSG00000162642.13 TPM= 17.38 Transcript Type= protein_coding
chr1	85266248	85277090	85266248	85277090	-	ENST00000370580.5@BCL10	ENST00000370580.5	protein_coding	85276296,85270618,85266248	85277090,85270906,85267982	Gene ID= ENSG00000142867.12 TPM= 21.24 Transcript Type= protein_coding
chr1	85274443	85276631	85274443	85276631	-	transcript5003.chr1.nnic@NA	transcript5003.chr1.nnic	NA	85274443	85276631	Gene ID= novel_gene_chr1_5004 TPM= 1.93 Transcript Type= NA
chr1	85580761	85583962	85580761	85583962	+	ENST00000451137.6@CYR61	ENST00000451137.6	protein_coding	85580761,85581365,85581928,85582416,85582740	85581047,85581578,85582284,85582624,85583962	Gene ID= ENSG00000142871.16 TPM= 28.96 Transcript Type= protein_coding
chr1	85652808	85708418	85652808	85708418	-	ENST00000370574.3@ZNHIT6	ENST00000370574.3	protein_coding	85707629,85706442,85706249,85706078,85702157,85680836,85678701,85677236,85657847,85652808	85708418,85706507,85706355,85706163,85702260,85680904,85678781,85677313,85657971,85654098	Gene ID= ENSG00000117174.10 TPM= 7.72 Transcript Type= protein_coding
chr1	86703501	86705198	86703501	86705198	-	transcript5037.chr1.nnic@NA	transcript5037.chr1.nnic	NA	86703501	86705198	Gene ID= novel_gene_chr1_5038 TPM= 3.86 Transcript Type= NA
chr1	86704570	86748176	86704570	86748176	+	ENST00000535010.5@SH3GLB1	ENST00000535010.5	protein_coding	86704570,86719507,86722540,86724313,86734602,86735079,86742208,86743128	86704971,86719635,86722673,86724405,86734691,86735179,86742436,86748176	Gene ID= ENSG00000097033.14 TPM= 16.89 Transcript Type= protein_coding
chr1	86704576	86748184	86704576	86748184	+	ENST00000370558.8@SH3GLB1	ENST00000370558.8	protein_coding	86704576,86715724,86719507,86722540,86724313,86734602,86735079,86742208,86743128	86704971,86715865,86719635,86722673,86724405,86734691,86735179,86742436,86748184	Gene ID= ENSG00000097033.14 TPM= 37.16 Transcript Type= protein_coding
chr1	86862445	86914365	86862445	86914365	-	ENST00000331835.9@SELENOF	ENST00000331835.9	protein_coding	86914028,86903281,86880662,86868053,86862445	86914365,86903448,86880725,86868102,86863605	Gene ID= ENSG00000183291.15 TPM= 6.76 Transcript Type= protein_coding
chr1	86862725	86914134	86862725	86914134	-	ENST00000370554.5@SELENOF	ENST00000370554.5	protein_coding	86914028,86903281,86880662,86862725	86914134,86903448,86880725,86863605	Gene ID= ENSG00000183291.15 TPM= 4.83 Transcript Type= protein_coding
chr1	86914648	87098445	86914648	87098445	+	ENST00000370551.8@HS2ST1	ENST00000370551.8	protein_coding	86914648,87072934,87084194,87092531,87097838	86915160,87073172,87084279,87092669,87098445	Gene ID= ENSG00000153936.16 TPM= 2.9 Transcript Type= protein_coding
chr1	87328468	87348923	87328468	87348923	+	ENST00000370544.9@LMO4	ENST00000370544.9	protein_coding	87328468,87332013,87339536,87340047,87344788	87329244,87332251,87339632,87340202,87348923	Gene ID= ENSG00000143013.12 TPM= 3.86 Transcript Type= protein_coding
chr1	88684278	88833757	88684278	88833757	+	transcript5050.chr1.nnic@PKN2	transcript5050.chr1.nnic	protein_coding	88684278,88740988,88760222,88770352,88771421,88771663,88784639,88786104,88804391,88804846,88805497,88805891,88807313,88807529,88807684,88813557,88821941,88824310,88828481,88832744,88833077,88833245	88684628,88741288,88760376,88770469,88771566,88771879,88784776,88786213,88804534,88804921,88805671,88806017,88807443,88807604,88807775,88813733,88822003,88824386,88828623,88832851,88833157,88833757	Gene ID= ENSG00000065243.19 TPM= 2.9 Transcript Type= NA
chr1	88684222	88836255	88684222	88836255	+	ENST00000370521.7@PKN2	ENST00000370521.7	protein_coding	88684222,88740988,88760222,88770352,88771421,88771663,88784639,88786104,88804391,88804846,88805497,88805891,88807313,88807529,88807684,88813557,88821941,88824310,88828481,88832744,88833077,88833245	88684628,88741288,88760376,88770469,88771566,88771879,88784824,88786213,88804534,88804921,88805671,88806017,88807443,88807604,88807775,88813733,88822003,88824386,88828623,88832851,88833157,88836255	Gene ID= ENSG00000065243.19 TPM= 4.83 Transcript Type= protein_coding
chr1	88852932	88891618	88852932	88891618	-	ENST00000370500.9@GTF2B	ENST00000370500.9	protein_coding	88891483,88887261,88863981,88860140,88859882,88857206,88852932	88891618,88887367,88864114,88860286,88860011,88857487,88853346	Gene ID= ENSG00000137947.11 TPM= 21.24 Transcript Type= protein_coding
chr1	88979456	88992772	88979456	88992772	-	ENST00000321792.5@RBMXL1	ENST00000321792.5	protein_coding	88992585,88979456	88992772,88984066	Gene ID= ENSG00000213516.9 TPM= 17.38 Transcript Type= protein_coding
chr1	89993283	89994982	89993283	89994982	-	transcript5081.chr1.nnic@NA	transcript5081.chr1.nnic	NA	89993283	89994982	Gene ID= novel_gene_chr1_5082 TPM= 2.9 Transcript Type= NA
chr1	89995115	90028538	89995115	90028538	+	ENST00000340281.8@ZNF326	ENST00000340281.8	protein_coding	89995115,89998110,90005003,90005133,90007345,90010088,90013126,90017317,90018685,90020792,90022250,90027354	89995273,89998154,90005038,90005244,90007750,90010286,90013237,90017464,90018784,90020922,90022345,90028538	Gene ID= ENSG00000162664.16 TPM= 2.9 Transcript Type= protein_coding
chr1	90782983	90851657	90782983	90851657	-	ENST00000635581.1@AL590094.1	ENST00000635581.1	processed_transcript	90851483,90789398,90782983	90851657,90789487,90783423	Gene ID= ENSG00000233593.8 TPM= 2.9 Transcript Type= lincRNA
chr1	90915635	91021996	90915635	91021996	-	transcript5099.chr1.nnic@ZNF644	transcript5099.chr1.nnic	protein_coding	91021689,90982310,90938272,90937485,90918052,90915635	91021996,90982370,90941309,90938090,90918154,90916990	Gene ID= ENSG00000122482.20 TPM= 3.38 Transcript Type= NA
chr1	90937919	91022077	90937919	91022077	-	transcript5102.chr1.nnic@ZNF644	transcript5102.chr1.nnic	protein_coding	91021990,91020637,90982310,90938272,90937919	91022077,91021201,90982370,90941309,90938090	Gene ID= ENSG00000122482.20 TPM= 4.34 Transcript Type= NA
chr1	90939794	90982370	90939794	90982370	-	transcript5109.chr1.nnic@ZNF644	transcript5109.chr1.nnic	protein_coding	90982312,90944287,90939794	90982370,90944340,90941309	Gene ID= ENSG00000122482.20 TPM= 1.93 Transcript Type= NA
chr1	91260766	91404521	91260766	91404521	-	transcript5114.chr1.nnic@HFM1	transcript5114.chr1.nnic	protein_coding	91404457,91401012,91394093,91385575,91385187,91380912,91380104,91379063,91378403,91378025,91375527,91353256,91353051,91352506,91347429,91324675,91322950,91319293,91319078,91316101,91315815,91313957,91313349,91276982,91276628,91274730,91273712,91267745,91262481,91262241,91260766	91404521,91401109,91394402,91385834,91385234,91380982,91380236,91379214,91378480,91378183,91375727,91353299,91353152,91352651,91347476,91324766,91322997,91319390,91319209,91316184,91315972,91314060,91313495,91277062,91276743,91274809,91273815,91267855,91262592,91262392,91261359	Gene ID= ENSG00000162669.15 TPM= 1.93 Transcript Type= NA
chr1	91680345	91886279	91680345	91886279	-	ENST00000212355.8@TGFBR3	ENST00000212355.8	protein_coding	91885878,91861471,91797287,91758613,91734776,91729805,91727659,91721955,91719893,91719312,91716568,91716236,91712243,91708663,91698089,91695672,91680345	91886279,91861644,91797471,91758750,91734959,91729973,91727806,91722144,91720230,91719464,91716708,91716394,91712542,91708783,91698130,91695779,91683857	Gene ID= ENSG00000069702.10 TPM= 9.65 Transcript Type= protein_coding
chr1	92298965	92402056	92298965	92402056	+	ENST00000610020.1@RPAP2	ENST00000610020.1	protein_coding	92298965,92300194,92301476,92303977,92304284,92307188,92320599,92323445,92333391,92336347,92345846,92380724,92387011	92299146,92300239,92301590,92304075,92304349,92307276,92320634,92324375,92333473,92336427,92345914,92380873,92402056	Gene ID= ENSG00000122484.8 TPM= 3.86 Transcript Type= protein_coding
chr1	92299020	92324699	92299020	92324699	+	transcript5150.chr1.nic@RPAP2	transcript5150.chr1.nic	protein_coding	92299020,92300194,92301476,92303977,92304284,92307188,92320599,92323445	92299146,92300239,92301590,92304075,92304349,92307276,92320634,92324699	Gene ID= ENSG00000122484.8 TPM= 2.9 Transcript Type= NA
chr1	92832025	92841924	92832025	92841924	+	ENST00000370321.7@RPL5	ENST00000370321.7	protein_coding	92832025,92833389,92833545,92834779,92836190,92837456,92840551,92841766	92832117,92833458,92833660,92834913,92836392,92837633,92840639,92841924	Gene ID= ENSG00000122406.12 TPM= 351.37 Transcript Type= protein_coding
chr1	92842167	92961500	92842167	92961500	-	ENST00000370310.4@FAM69A	ENST00000370310.4	protein_coding	92961376,92876296,92850848,92847183,92842167	92961500,92876430,92850955,92847359,92844195	Gene ID= ENSG00000154511.11 TPM= 4.83 Transcript Type= protein_coding
chr1	93151858	93180516	93151858	93180516	-	ENST00000370290.7@TMED5	ENST00000370290.7	protein_coding	93180054,93160129,93158815,93156300,93151858	93180516,93160226,93158885,93156483,93154888	Gene ID= ENSG00000117500.12 TPM= 23.65 Transcript Type= nonsense_mediated_decay
chr1	93149742	93180728	93149742	93180728	-	ENST00000370282.7@TMED5	ENST00000370282.7	protein_coding	93180054,93160129,93156300,93149742	93180728,93160226,93156483,93154888	Gene ID= ENSG00000117500.12 TPM= 169.89 Transcript Type= protein_coding
chr1	93345888	93369498	93345888	93369498	+	ENST00000370272.8@DR1	ENST00000370272.8	protein_coding	93345888,93353908,93360493	93346865,93354071,93369498	Gene ID= ENSG00000117505.12 TPM= 30.89 Transcript Type= protein_coding
chr1	93448131	93554659	93448131	93554659	+	ENST00000260506.12@FNBP1L	ENST00000260506.12	protein_coding	93448131,93499468,93522082,93523344,93524261,93529652,93530755,93532922,93534705,93544107,93546842,93547347,93549278,93550947	93448305,93499583,93522135,93523491,93524323,93529756,93530883,93533068,93534908,93544216,93546974,93547441,93549426,93554659	Gene ID= ENSG00000137942.16 TPM= 2.9 Transcript Type= protein_coding
chr1	93561791	93681829	93561791	93681829	-	ENST00000260502.10@BCAR3	ENST00000260502.10	protein_coding	93681598,93674614,93642304,93592265,93588977,93584018,93582301,93576014,93571670,93567740,93567279,93561791	93681829,93674941,93642343,93592393,93589419,93584121,93582953,93576129,93571841,93567851,93567491,93562419	Gene ID= ENSG00000137936.16 TPM= 14.48 Transcript Type= protein_coding
chr1	93561786	93614097	93561786	93614097	-	ENST00000370247.7@BCAR3	ENST00000370247.7	protein_coding	93613847,93592265,93588977,93584018,93582301,93576014,93571670,93567740,93567279,93561786	93614097,93592393,93589419,93584121,93582953,93576129,93571841,93567851,93567491,93562419	Gene ID= ENSG00000137936.16 TPM= 27.03 Transcript Type= protein_coding
chr1	93778309	93780043	93778309	93780043	-	transcript5206.chr1.nnic@NA	transcript5206.chr1.nnic	NA	93778309	93780043	Gene ID= novel_gene_chr1_5207 TPM= 1.93 Transcript Type= NA
chr1	93869780	93878604	93869780	93878604	-	transcript5210.chr1.nic@DNTTIP2	transcript5210.chr1.nic	protein_coding	93878548,93876268,93875645,93873119,93872072,93870683,93869780	93878604,93877862,93875783,93873214,93872236,93870792,93869944	Gene ID= ENSG00000067334.13 TPM= 6.76 Transcript Type= NA
chr1	93885205	93909410	93885205	93909410	-	ENST00000370238.7@GCLM	ENST00000370238.7	protein_coding	93909038,93904523,93901585,93897839,93896618,93894614,93885205	93909410,93904588,93901669,93897898,93896820,93894728,93889159	Gene ID= ENSG00000023909.9 TPM= 4.83 Transcript Type= protein_coding
chr1	93887034	93909456	93887034	93909456	-	ENST00000615724.1@GCLM	ENST00000615724.1	protein_coding	93909038,93901585,93897839,93896618,93894614,93887034	93909456,93901669,93897898,93896820,93894728,93889159	Gene ID= ENSG00000023909.9 TPM= 4.83 Transcript Type= protein_coding
chr1	94172601	94247760	94172601	94247760	-	transcript5225.chr1.nnic@ARHGAP29	transcript5225.chr1.nnic	protein_coding	94247565,94231407,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94202544,94201720,94189926,94189216,94188837,94186499,94185342,94184872,94184151,94179725,94177852,94177612,94172601	94247760,94231643,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732,94201857,94190083,94189352,94188941,94186597,94185481,94185060,94184288,94179957,94178167,94177720,94174749	Gene ID= ENSG00000137962.12 TPM= 2.9 Transcript Type= NA
chr1	94179888	94237557	94179888	94237557	-	transcript5227.chr1.nic@ARHGAP29	transcript5227.chr1.nic	protein_coding	94237415,94231407,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94202544,94201720,94189926,94189216,94188837,94186499,94185342,94184872,94184151,94179888	94237557,94231643,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732,94201857,94190083,94189352,94188941,94186597,94185481,94185060,94184288,94179957	Gene ID= ENSG00000137962.12 TPM= 1.93 Transcript Type= NA
chr1	94201895	94237633	94201895	94237633	-	ENST00000370217.3@ARHGAP29	ENST00000370217.3	protein_coding	94237415,94231407,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94201895	94237633,94231643,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732	Gene ID= ENSG00000137962.12 TPM= 5.79 Transcript Type= protein_coding
chr1	94203100	94247760	94203100	94247760	-	transcript5233.chr1.nnic@ARHGAP29	transcript5233.chr1.nnic	protein_coding	94247565,94220258,94209254,94208832,94205635,94205061,94203930,94203100	94247760,94220392,94209350,94208904,94205683,94205198,94203994,94203210	Gene ID= ENSG00000137962.12 TPM= 1.93 Transcript Type= NA
chr1	94232934	94237565	94232934	94237565	-	transcript5240.chr1.nnic@NA	transcript5240.chr1.nnic	NA	94232934	94237565	Gene ID= novel_gene_chr1_5241 TPM= 1.93 Transcript Type= NA
chr1	94418404	94518496	94418404	94518496	+	transcript5246.chr1.nnic@ABCD3	transcript5246.chr1.nnic	protein_coding	94418404,94455733,94458607,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94455804,94458643,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518496	Gene ID= ENSG00000117528.11 TPM= 1.93 Transcript Type= NA
chr1	94418389	94518663	94418389	94518663	+	transcript5248.chr1.nnic@ABCD3	transcript5248.chr1.nnic	protein_coding	94418389,94458607,94464775,94467919,94472173,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94458643,94464873,94468007,94472242,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518663	Gene ID= ENSG00000117528.11 TPM= 3.21 Transcript Type= NA
chr1	94418404	94518663	94418404	94518663	+	transcript5257.chr1.nnic@ABCD3	transcript5257.chr1.nnic	protein_coding	94418404,94455733,94458607,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94455804,94458643,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518663	Gene ID= ENSG00000117528.11 TPM= 3.21 Transcript Type= NA
chr1	94418389	94518496	94418389	94518496	+	transcript5258.chr1.nnic@ABCD3	transcript5258.chr1.nnic	protein_coding	94418389,94458607,94464775,94467919,94472173,94475143,94475614,94478259,94480464,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94458643,94464873,94468007,94472242,94475240,94475737,94478315,94480606,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518496	Gene ID= ENSG00000117528.11 TPM= 1.93 Transcript Type= NA
chr1	94418389	94518496	94418389	94518496	+	transcript5259.chr1.nnic@ABCD3	transcript5259.chr1.nnic	protein_coding	94418389,94458607,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94458643,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518496	Gene ID= ENSG00000117528.11 TPM= 2.9 Transcript Type= NA
chr1	94418455	94518663	94418455	94518663	+	ENST00000370214.8@ABCD3	ENST00000370214.8	protein_coding	94418455,94458607,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94458643,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518663	Gene ID= ENSG00000117528.11 TPM= 9.97 Transcript Type= protein_coding
chr1	94896951	94927278	94896951	94927278	-	ENST00000370206.8@CNN3	ENST00000370206.8	protein_coding	94926838,94903403,94903122,94902121,94901669,94899371,94896951	94927278,94903524,94903188,94902258,94901785,94899517,94898083	Gene ID= ENSG00000117519.15 TPM= 24.13 Transcript Type= protein_coding
chr1	94974407	95072945	94974407	95072945	-	ENST00000370205.5@ALG14	ENST00000370205.5	protein_coding	95072763,95064866,95027129,94974407	95072945,95065017,95027260,94983306	Gene ID= ENSG00000172339.9 TPM= 1.93 Transcript Type= protein_coding
chr1	95117338	95197607	95117338	95197607	+	ENST00000370203.8@TMEM56	ENST00000370203.8	protein_coding	95117338,95143891,95148702,95150208,95151325,95173816,95191550	95117617,95144056,95148791,95150266,95151419,95173889,95197607	Gene ID= ENSG00000152078.9 TPM= 6.76 Transcript Type= protein_coding
chr1	95234168	95247223	95234168	95247223	+	transcript5280.chr1.nic@RWDD3	transcript5280.chr1.nic	protein_coding	95234168,95237348,95239777,95244211,95246542,95246756	95234315,95237460,95239909,95244698,95246657,95247223	Gene ID= ENSG00000122481.16 TPM= 2.17 Transcript Type= NA
chr1	95234168	95247223	95234168	95247223	+	transcript5282.chr1.nnic@RWDD3	transcript5282.chr1.nnic	protein_coding	95234168,95237348,95244211,95246542,95246756	95234315,95237460,95244698,95246657,95247223	Gene ID= ENSG00000122481.16 TPM= 3.14 Transcript Type= NA
chr1	95234155	95247225	95234155	95247225	+	ENST00000370202.4@RWDD3	ENST00000370202.4	protein_coding	95234155,95244211,95246542,95246756	95234315,95244698,95246657,95247225	Gene ID= ENSG00000122481.16 TPM= 2.17 Transcript Type= protein_coding
chr1	95234221	95247217	95234221	95247217	+	ENST00000495272.5@RWDD3	ENST00000495272.5	protein_coding	95234221,95239777,95244211,95246542,95246756	95234315,95239909,95244698,95246657,95247217	Gene ID= ENSG00000122481.16 TPM= 1.21 Transcript Type= processed_transcript
chr1	96721822	96814793	96721822	96814793	+	ENST00000426398.2@PTBP2	ENST00000426398.2	protein_coding	96721822,96723564,96751425,96769703,96770708,96777585,96777836,96785059,96804800,96806419,96806866,96812712,96813029,96813276	96721872,96723594,96751500,96769875,96770851,96777749,96777946,96785254,96804939,96806452,96806958,96812928,96813106,96814793	Gene ID= ENSG00000117569.18 TPM= 4.83 Transcript Type= protein_coding
chr1	97077743	97921023	97077743	97921023	-	ENST00000370192.7@DPYD	ENST00000370192.7	protein_coding	97920884,97883264,97828114,97740392,97721510,97699351,97691717,97679095,97595059,97593218,97573760,97549560,97515726,97450059,97382393,97373561,97306177,97305259,97234852,97193069,97098489,97082330,97077743	97921023,97883374,97828196,97740479,97721671,97699547,97691798,97679182,97595166,97593387,97573970,97549744,97515941,97450223,97382461,97373644,97306297,97305378,97234994,97193248,97098632,97082470,97079146	Gene ID= ENSG00000188641.12 TPM= 5.79 Transcript Type= protein_coding
chr1	98661723	98760500	98661723	98760500	+	ENST00000306121.7@SNX7	ENST00000306121.7	protein_coding	98661723,98684885,98691075,98691535,98695518,98698706,98701817,98738237,98760054	98661911,98685067,98691185,98691699,98695716,98698905,98701903,98738389,98760500	Gene ID= ENSG00000162627.16 TPM= 4.83 Transcript Type= protein_coding
chr1	99645845	99687164	99645845	99687164	+	transcript5312.chr1.nic@PALMD	transcript5312.chr1.nic	protein_coding	99645845,99662319,99667642,99686676,99686930,99687076	99646362,99662399,99667766,99686790,99686963,99687164	Gene ID= ENSG00000099260.10 TPM= 4.83 Transcript Type= NA
chr1	99850100	99921961	99850100	99921961	+	transcript5323.chr1.nnic@AGL	transcript5323.chr1.nnic	protein_coding	99850100,99851035,99861503,99862257,99864386,99870400,99870758,99874687,99875154,99875358,99876458,99877641,99879923,99880632,99881076,99881292,99881541,99884120,99884339,99884569,99887978,99891220,99891606,99892432,99896286,99900636,99902683,99910712,99912405,99913527,99915389,99916410,99916598,99921534	99850415,99851124,99861713,99862423,99864589,99870581,99870869,99874810,99875256,99875455,99876597,99877828,99880046,99880795,99881177,99881447,99881691,99884244,99884451,99884703,99888108,99891356,99891739,99892607,99896388,99900861,99902794,99910847,99912517,99913738,99915486,99916497,99916731,99921961	Gene ID= ENSG00000162688.16 TPM= 4.59 Transcript Type= NA
chr1	99850489	99924020	99850489	99924020	+	ENST00000294724.8@AGL	ENST00000294724.8	protein_coding	99850489,99850975,99861503,99862257,99864386,99870400,99870758,99874687,99875154,99875358,99876458,99877641,99879923,99880632,99881076,99881292,99881541,99884120,99884339,99884569,99887978,99891220,99891606,99892432,99896286,99900636,99902683,99910712,99912405,99913527,99915389,99916410,99916598,99921534	99850898,99851124,99861713,99862423,99864589,99870581,99870869,99874810,99875256,99875455,99876597,99877828,99880046,99880795,99881177,99881447,99881691,99884244,99884451,99884703,99888108,99891356,99891739,99892607,99896388,99900861,99902794,99910847,99912517,99913738,99915486,99916497,99916731,99924020	Gene ID= ENSG00000162688.16 TPM= 21.31 Transcript Type= protein_coding
chr1	99850283	99915448	99850283	99915448	+	transcript5333.chr1.nic@AGL	transcript5333.chr1.nic	protein_coding	99850283,99850975,99861503,99862257,99864386,99870400,99870758,99874687,99875154,99875358,99876458,99877641,99879923,99880632,99881076,99881292,99881541,99884120,99884339,99884569,99887978,99891220,99891606,99892432,99896286,99900636,99902683,99910712,99912405,99913527,99915389	99850415,99851124,99861713,99862423,99864589,99870581,99870869,99874810,99875256,99875455,99876597,99877828,99880046,99880795,99881177,99881447,99881691,99884244,99884451,99884703,99888108,99891356,99891739,99892607,99896388,99900861,99902794,99910847,99912517,99913738,99915448	Gene ID= ENSG00000162688.16 TPM= 4.83 Transcript Type= NA
chr1	99850084	99924020	99850084	99924020	+	ENST00000361915.7@AGL	ENST00000361915.7	protein_coding	99850084,99850975,99861503,99862257,99864386,99870400,99870758,99874687,99875154,99875358,99876458,99877641,99879923,99880632,99881076,99881292,99881541,99884120,99884339,99884569,99887978,99891220,99891606,99892432,99896286,99900636,99902683,99910712,99912405,99913527,99915389,99916410,99916598,99921534	99850415,99851124,99861713,99862423,99864589,99870581,99870869,99874810,99875256,99875455,99876597,99877828,99880046,99880795,99881177,99881447,99881691,99884244,99884451,99884703,99888108,99891356,99891739,99892607,99896388,99900861,99902794,99910847,99912517,99913738,99915486,99916497,99916731,99924020	Gene ID= ENSG00000162688.16 TPM= 21.31 Transcript Type= protein_coding
chr1	99850489	99924020	99850489	99924020	+	ENST00000370163.7@AGL	ENST00000370163.7	protein_coding	99850489,99850975,99861503,99862257,99864386,99870400,99870758,99874687,99875154,99875358,99876458,99877641,99879923,99880632,99881076,99881292,99881541,99884120,99884339,99884569,99887978,99891220,99891606,99892432,99896286,99900636,99902683,99910712,99912405,99913527,99915389,99916410,99916598,99921534	99850618,99851124,99861713,99862423,99864589,99870581,99870869,99874810,99875256,99875455,99876597,99877828,99880046,99880795,99881177,99881447,99881691,99884244,99884451,99884703,99888108,99891356,99891739,99892607,99896388,99900861,99902794,99910847,99912517,99913738,99915486,99916497,99916731,99924020	Gene ID= ENSG00000162688.16 TPM= 11.66 Transcript Type= protein_coding
chr1	99856439	99857725	99856439	99857725	-	transcript5346.chr1.nnic@NA	transcript5346.chr1.nnic	NA	99856439	99857725	Gene ID= novel_gene_chr1_5347 TPM= 2.9 Transcript Type= NA
chr1	99969561	100035637	99969561	100035637	+	ENST00000533028.7@SLC35A3	ENST00000533028.7	protein_coding	99969561,99993537,99999261,100007034,100011365,100015302,100017682,100022386	99970162,99993741,99999415,100007156,100011533,100015420,100017815,100035637	Gene ID= ENSG00000117620.14 TPM= 1.93 Transcript Type= protein_coding
chr1	100038097	100083377	100038097	100083377	+	transcript5358.chr1.nnic@AC118553.2	transcript5358.chr1.nnic	protein_coding	100038097,100043073,100049909,100058666,100059878,100061835,100067977,100068473,100069614,100077165,100078451,100080496,100082003	100038316,100043229,100050004,100058728,100060005,100061949,100068195,100068586,100069685,100077277,100078548,100080659,100083377	Gene ID= ENSG00000283761.1 TPM= 1.93 Transcript Type= NA
chr1	100038097	100083377	100038097	100083377	+	ENST00000370152.7@MFSD14A	ENST00000370152.7	protein_coding	100038097,100049909,100058666,100059878,100061835,100067977,100068473,100069614,100077165,100078451,100080496,100082003	100038316,100050004,100058728,100060005,100061949,100068195,100068586,100069685,100077277,100078548,100080659,100083377	Gene ID= ENSG00000156875.13 TPM= 43.44 Transcript Type= protein_coding
chr1	100133163	100150497	100133163	100150497	+	ENST00000370141.6@TRMT13	ENST00000370141.6	protein_coding	100133163,100136882,100137019,100139649,100140182,100140408,100140852,100143137,100144069,100147894,100148625	100133315,100136928,100137085,100139711,100140251,100140514,100141019,100143209,100144143,100148326,100150497	Gene ID= ENSG00000122435.9 TPM= 2.9 Transcript Type= protein_coding
chr1	100146509	100148058	100146509	100148058	-	transcript5393.chr1.nnic@NA	transcript5393.chr1.nnic	NA	100146509	100148058	Gene ID= novel_gene_chr1_5394 TPM= 1.93 Transcript Type= NA
chr1	100148853	100178267	100148853	100178267	-	transcript5372.chr1.nnic@LRRC39	transcript5372.chr1.nnic	protein_coding	100178135,100173331,100169987,100168404,100160466,100159259,100158231,100156172,100155051,100152385,100148853	100178267,100173370,100170078,100168594,100160571,100159415,100158367,100156317,100155203,100152524,100149097	Gene ID= ENSG00000122477.12 TPM= 1.93 Transcript Type= NA
chr1	100148449	100178256	100148449	100178256	-	transcript5377.chr1.nnic@LRRC39	transcript5377.chr1.nnic	protein_coding	100178118,100173331,100168404,100160466,100159259,100158231,100156172,100155051,100152385,100148449	100178256,100173370,100168594,100160571,100159415,100158367,100156317,100155203,100152524,100149097	Gene ID= ENSG00000122477.12 TPM= 4.83 Transcript Type= NA
chr1	100148853	100178215	100148853	100178215	-	ENST00000370137.5@LRRC39	ENST00000370137.5	protein_coding	100178135,100173331,100168404,100160466,100159259,100158231,100156172,100155051,100152385,100148853	100178215,100173370,100168594,100160571,100159415,100158367,100156317,100155203,100152524,100149097	Gene ID= ENSG00000122477.12 TPM= 42.47 Transcript Type= protein_coding
chr1	100148853	100178215	100148853	100178215	-	ENST00000370138.1@LRRC39	ENST00000370138.1	protein_coding	100178135,100173331,100168404,100160466,100159259,100158231,100156172,100155051,100152385,100149366,100148853	100178215,100173370,100168594,100160571,100159415,100158367,100156317,100155203,100152524,100149435,100149097	Gene ID= ENSG00000122477.12 TPM= 2.9 Transcript Type= protein_coding
chr1	100262853	100266116	100262853	100266116	-	transcript5404.chr1.nic@RTCA-AS1	transcript5404.chr1.nic	antisense_RNA	100266004,100265815,100262853	100266116,100265917,100265247	Gene ID= ENSG00000224616.1 TPM= 2.9 Transcript Type= NA
chr1	100266160	100292769	100266160	100292769	+	transcript5415.chr1.nnic@RTCA	transcript5415.chr1.nnic	protein_coding	100266160,100266524,100268137,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100292769	Gene ID= ENSG00000137996.12 TPM= 1.93 Transcript Type= NA
chr1	100266215	100291771	100266215	100291771	+	transcript5420.chr1.nnic@RTCA	transcript5420.chr1.nnic	protein_coding	100266215,100266524,100268152,100270557,100273394,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100268295,100270680,100273452,100275723,100277316,100285322,100287203,100291771	Gene ID= ENSG00000137996.12 TPM= 3.86 Transcript Type= NA
chr1	100266207	100292769	100266207	100292769	+	ENST00000370128.8@RTCA	ENST00000370128.8	protein_coding	100266207,100266524,100268152,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100292769	Gene ID= ENSG00000137996.12 TPM= 19.31 Transcript Type= protein_coding
chr1	100266249	100291771	100266249	100291771	+	ENST00000260563.4@RTCA	ENST00000260563.4	protein_coding	100266249,100266524,100267500,100268152,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100267538,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100291771	Gene ID= ENSG00000137996.12 TPM= 3.86 Transcript Type= protein_coding
chr1	100872387	100895998	100872387	100895998	-	ENST00000370114.7@EXTL2	ENST00000370114.7	protein_coding	100894633,100888753,100877476,100876794,100872387	100895998,100888828,100877903,100876864,100874430	Gene ID= ENSG00000162694.13 TPM= 2.9 Transcript Type= protein_coding
chr1	100896076	100981753	100896076	100981753	+	ENST00000370112.8@SLC30A7	ENST00000370112.8	protein_coding	100896076,100896570,100906852,100911063,100912112,100913663,100918077,100921706,100961828,100965769,100974810,100975219	100896342,100896671,100906965,100911150,100912238,100913806,100918127,100921841,100961918,100965918,100974902,100981753	Gene ID= ENSG00000162695.11 TPM= 11.58 Transcript Type= protein_coding
chr1	100990063	101025792	100990063	101025792	-	transcript5441.chr1.nnic@DPH5	transcript5441.chr1.nnic	protein_coding	101025683,101025309,101021641,100995110,100992637,100990063	101025792,101025466,101021765,100995149,100992740,100990631	Gene ID= ENSG00000117543.20 TPM= 1.93 Transcript Type= NA
chr1	101236888	101241518	101236888	101241518	+	ENST00000305352.6@S1PR1	ENST00000305352.6	protein_coding	101236888,101238822	101237099,101241518	Gene ID= ENSG00000170989.8 TPM= 35.72 Transcript Type= protein_coding
chr1	103525670	103527406	103525670	103527406	+	transcript5471.chr1.nnic@NA	transcript5471.chr1.nnic	NA	103525670	103527406	Gene ID= novel_gene_chr1_5472 TPM= 9.65 Transcript Type= NA
chr1	103525681	103579529	103525681	103579529	+	transcript5449.chr1.nic@RNPC3	transcript5449.chr1.nic	protein_coding	103525681,103526067,103527695,103533739,103534774,103535330,103536126,103537342,103541350,103543296,103544941,103546248,103546977,103550941,103551721,103553274,103565435,103571557,103572110,103573063,103573708,103574260,103575223,103575441,103577490,103577720,103579311	103525823,103526262,103527742,103533857,103534857,103535441,103536194,103537484,103541475,103543447,103545102,103546342,103547035,103551073,103551792,103555109,103565594,103571770,103572256,103573260,103573938,103574393,103575345,103575540,103577608,103577845,103579529	Gene ID= ENSG00000185946.15 TPM= 3.06 Transcript Type= NA
chr1	103525901	103579529	103525901	103579529	+	transcript5450.chr1.nic@RNPC3	transcript5450.chr1.nic	protein_coding	103525901,103527695,103533739,103534774,103535330,103536126,103537342,103541350,103543296,103544941,103546248,103546977,103550941,103551721,103553274,103565435,103571557,103572110,103573063,103573708,103574260,103575223,103575441,103577490,103577720,103579311	103526262,103527742,103533857,103534857,103535441,103536194,103537484,103541475,103543447,103545102,103546342,103547035,103551073,103551792,103555109,103565594,103571770,103572256,103573260,103573938,103574393,103575345,103575540,103577608,103577845,103579529	Gene ID= ENSG00000185946.15 TPM= 3.06 Transcript Type= NA
chr1	103561798	103579529	103561798	103579529	+	transcript5463.chr1.nic@AMY2B	transcript5463.chr1.nic	protein_coding	103561798,103565435,103571557,103572110,103573063,103573708,103574260,103575223,103575441,103577490,103577720,103579311	103562094,103565594,103571770,103572256,103573260,103573938,103574393,103575345,103575540,103577608,103577845,103579529	Gene ID= ENSG00000240038.6 TPM= 11.27 Transcript Type= NA
chr1	107056679	107059294	107056679	107059294	+	ENST00000370078.1@PRMT6	ENST00000370078.1	protein_coding	107056679	107059294	Gene ID= ENSG00000198890.7 TPM= 5.79 Transcript Type= protein_coding
chr1	108199926	108201491	108199926	108201491	+	ENST00000564063.1@AL359258.2	ENST00000564063.1	antisense_RNA	108199926	108201491	Gene ID= ENSG00000260879.1 TPM= 2.9 Transcript Type= antisense_RNA
chr1	108648290	108661122	108648290	108661122	-	ENST00000402983.5@HENMT1	ENST00000402983.5	protein_coding	108660963,108659864,108657451,108655586,108654716,108651030,108650211,108648290	108661122,108659962,108657579,108655698,108654850,108651209,108650388,108648991	Gene ID= ENSG00000162639.15 TPM= 1.93 Transcript Type= protein_coding
chr1	108692302	108700824	108692302	108700824	+	transcript5488.chr1.nnic@PRPF38B	transcript5488.chr1.nnic	protein_coding	108692302,108695702,108696043,108696277,108697810,108698604,108699162	108692867,108695770,108696194,108696337,108697863,108698827,108700824	Gene ID= ENSG00000134186.11 TPM= 3.86 Transcript Type= NA
chr1	108692302	108697504	108692302	108697504	+	transcript5497.chr1.nic@PRPF38B	transcript5497.chr1.nic	protein_coding	108692302,108695702,108696043,108696277	108692867,108695770,108696194,108697504	Gene ID= ENSG00000134186.11 TPM= 1.93 Transcript Type= NA
chr1	108746688	108809526	108746688	108809526	+	ENST00000370008.3@STXBP3	ENST00000370008.3	protein_coding	108746688,108752257,108753063,108756690,108758510,108759985,108772665,108776333,108779286,108782422,108782649,108793582,108794827,108796234,108796620,108798145,108800220,108807401,108808783	108746786,108752306,108753144,108756766,108758588,108760085,108772819,108776423,108779410,108782517,108782706,108793647,108794907,108796372,108796726,108798237,108800305,108807549,108809526	Gene ID= ENSG00000116266.10 TPM= 49.23 Transcript Type= protein_coding
chr1	108875350	108934545	108875350	108934545	+	ENST00000406462.6@GPSM2	ENST00000406462.6	protein_coding	108875350,108876737,108885275,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701	108875382,108877228,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108934545	Gene ID= ENSG00000121957.12 TPM= 21.24 Transcript Type= protein_coding
chr1	108876968	108930421	108876968	108930421	+	transcript5510.chr1.nic@GPSM2	transcript5510.chr1.nic	protein_coding	108876968,108885507,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701	108877228,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108930421	Gene ID= ENSG00000121957.12 TPM= 31.21 Transcript Type= NA
chr1	108876968	108930421	108876968	108930421	+	transcript5521.chr1.nnic@GPSM2	transcript5521.chr1.nnic	protein_coding	108876968,108885507,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108922417,108924000,108929701	108877228,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108922576,108924214,108930421	Gene ID= ENSG00000121957.12 TPM= 3.21 Transcript Type= NA
chr1	108876969	108930421	108876969	108930421	+	transcript5522.chr1.nnic@GPSM2	transcript5522.chr1.nnic	protein_coding	108876969,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701	108877228,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108930421	Gene ID= ENSG00000121957.12 TPM= 23.17 Transcript Type= NA
chr1	108876981	108930421	108876981	108930421	+	ENST00000264126.7@GPSM2	ENST00000264126.7	protein_coding	108876981,108885275,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701	108877228,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108930421	Gene ID= ENSG00000121957.12 TPM= 23.17 Transcript Type= protein_coding
chr1	108929940	108963507	108929940	108963507	-	transcript5534.chr1.nic@CLCC1	transcript5534.chr1.nic	protein_coding	108963361,108962309,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108929940	108963507,108962469,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501	Gene ID= ENSG00000121940.15 TPM= 5.31 Transcript Type= NA
chr1	108931793	108963499	108931793	108963499	-	transcript5541.chr1.nnic@CLCC1	transcript5541.chr1.nnic	protein_coding	108963361,108954370,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108931793	108963499,108954472,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501	Gene ID= ENSG00000121940.15 TPM= 4.51 Transcript Type= NA
chr1	108929940	108963488	108929940	108963488	-	transcript5549.chr1.nnic@CLCC1	transcript5549.chr1.nnic	protein_coding	108963361,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108929940	108963488,108950438,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501	Gene ID= ENSG00000121940.15 TPM= 5.31 Transcript Type= NA
chr1	108970214	109042113	108970214	109042113	-	ENST00000369965.8@WDR47	ENST00000369965.8	protein_coding	109041862,109023355,109017518,109013841,109010916,109004592,109002224,108995580,108991254,108986523,108983282,108982609,108981733,108974536,108970214	109042113,109023521,109017601,109013925,109011718,109004718,109002402,108995837,108991329,108986680,108983451,108982779,108981864,108974754,108971572	Gene ID= ENSG00000085433.15 TPM= 15.44 Transcript Type= protein_coding
chr1	108992282	108992836	108992282	108992836	+	ENST00000414070.1@BX679664.3	ENST00000414070.1	processed_pseudogene	108992282	108992836	Gene ID= ENSG00000244716.3 TPM= 3.86 Transcript Type= processed_pseudogene
chr1	109089803	109096934	109089803	109096934	+	ENST00000338272.8@TMEM167B	ENST00000338272.8	protein_coding	109089803,109092890,109094417	109090882,109093021,109096934	Gene ID= ENSG00000215717.5 TPM= 17.38 Transcript Type= protein_coding
chr1	109213918	109238120	109213918	109238120	+	ENST00000234677.6@SARS	ENST00000234677.6	protein_coding	109213918,109223978,109228352,109229414,109230878,109231631,109235210,109235977,109236391,109237244,109237731	109214128,109224048,109228432,109229572,109231021,109231786,109235431,109236106,109236548,109237373,109238120	Gene ID= ENSG00000031698.12 TPM= 180.42 Transcript Type= protein_coding
chr1	109213932	109215153	109213932	109215153	+	ENST00000482384.1@SARS	ENST00000482384.1	protein_coding	109213932,109214547	109214128,109215153	Gene ID= ENSG00000031698.12 TPM= 3.86 Transcript Type= processed_transcript
chr1	109213982	109238148	109213982	109238148	+	ENST00000369923.4@SARS	ENST00000369923.4	protein_coding	109213982,109223978,109228352,109229414,109230878,109231631,109235210,109235977,109236391,109236805,109237244,109237731	109214128,109224048,109228432,109229572,109231021,109231786,109235431,109236106,109236548,109236870,109237373,109238148	Gene ID= ENSG00000031698.12 TPM= 13.42 Transcript Type= protein_coding
chr1	109273903	109275750	109273903	109275750	+	transcript5607.chr1.nnic@NA	transcript5607.chr1.nnic	NA	109273903	109275750	Gene ID= novel_gene_chr1_5608 TPM= 4.83 Transcript Type= NA
chr1	109309568	109393357	109309568	109393357	-	ENST00000538502.5@SORT1	ENST00000538502.5	protein_coding	109393027,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309568	109393357,109369589,109367481,109355469,109354531,109351002,109347532,109345878,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057	Gene ID= ENSG00000134243.11 TPM= 29.92 Transcript Type= protein_coding
chr1	109309570	109397937	109309570	109397937	-	transcript5623.chr1.nic@SORT1	transcript5623.chr1.nic	protein_coding	109397587,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309570	109397937,109369589,109367481,109355469,109354531,109351002,109347532,109345878,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057	Gene ID= ENSG00000134243.11 TPM= 43.44 Transcript Type= NA
chr1	109309570	109397951	109309570	109397951	-	ENST00000256637.7@SORT1	ENST00000256637.7	protein_coding	109397587,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309570	109397951,109369589,109367481,109355469,109354531,109351002,109347532,109345881,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057	Gene ID= ENSG00000134243.11 TPM= 113.91 Transcript Type= protein_coding
chr1	109425259	109426437	109425259	109426437	-	transcript5698.chr1.nnic@NA	transcript5698.chr1.nnic	NA	109425259	109426437	Gene ID= novel_gene_chr1_5699 TPM= 3.86 Transcript Type= NA
chr1	109466550	109481077	109466550	109481077	+	transcript5702.chr1.nnic@SYPL2	transcript5702.chr1.nnic	protein_coding	109466550,109467059,109475581,109476770,109477818,109479378	109466897,109467133,109475699,109476977,109478009,109481077	Gene ID= ENSG00000143028.8 TPM= 20.27 Transcript Type= NA
chr1	109466550	109479352	109466550	109479352	+	transcript5705.chr1.nnic@SYPL2	transcript5705.chr1.nnic	protein_coding	109466550,109467059,109475581,109476770,109477818	109466897,109467133,109475699,109476977,109479352	Gene ID= ENSG00000143028.8 TPM= 4.34 Transcript Type= NA
chr1	109466550	109467746	109466550	109467746	+	transcript5714.chr1.nic@SYPL2	transcript5714.chr1.nic	protein_coding	109466550,109467059	109466897,109467746	Gene ID= ENSG00000143028.8 TPM= 6.76 Transcript Type= NA
chr1	109466628	109482137	109466628	109482137	+	ENST00000369872.3@SYPL2	ENST00000369872.3	protein_coding	109466628,109467059,109475581,109476776,109477818,109479378	109466897,109467133,109475705,109476977,109478009,109482137	Gene ID= ENSG00000143028.8 TPM= 228.78 Transcript Type= protein_coding
chr1	109483934	109492734	109483934	109492734	+	transcript5717.chr1.nic@ATXN7L2	transcript5717.chr1.nic	protein_coding	109483934,109486057,109486506,109487007,109487518,109488383,109488847,109489930,109490271,109490922,109492586	109484080,109486122,109486610,109487217,109487804,109488465,109489100,109490128,109490392,109491717,109492734	Gene ID= ENSG00000162650.16 TPM= 9.65 Transcript Type= NA
chr1	109504178	109509734	109504178	109509734	-	transcript5721.chr1.nnic@AMIGO1	transcript5721.chr1.nnic	protein_coding	109509420,109504178	109509734,109508730	Gene ID= ENSG00000181754.6 TPM= 2.41 Transcript Type= NA
chr1	109504175	109509682	109504175	109509682	-	ENST00000369864.4@AMIGO1	ENST00000369864.4	protein_coding	109509420,109504175	109509682,109508999	Gene ID= ENSG00000181754.6 TPM= 10.14 Transcript Type= protein_coding
chr1	109619837	109632051	109619837	109632051	+	ENST00000342115.8@AMPD2	ENST00000342115.8	protein_coding	109619837,109625303,109625662,109626160,109626319,109626726,109627175,109627429,109627774,109628083,109628364,109628643,109629109,109629327,109629796,109630233,109630683,109630943	109620278,109625433,109625792,109626228,109626427,109626912,109627316,109627518,109627903,109628277,109628495,109628806,109629235,109629490,109629916,109630406,109630793,109632051	Gene ID= ENSG00000116337.15 TPM= 3.86 Transcript Type= protein_coding
chr1	109656098	109661700	109656098	109661700	+	transcript5733.chr1.nic@GSTM4	transcript5733.chr1.nic	protein_coding	109656098,109656712,109657215,109657590,109657772,109658814,109659000,109659790,109661165	109656425,109656787,109657279,109657671,109657872,109658909,109659110,109659959,109661700	Gene ID= ENSG00000168765.16 TPM= 4.34 Transcript Type= NA
chr1	109656081	109661700	109656081	109661700	+	ENST00000369836.8@GSTM4	ENST00000369836.8	protein_coding	109656081,109656712,109657215,109657590,109657772,109658814,109659000,109661165	109656425,109656787,109657279,109657671,109657872,109658909,109659110,109661700	Gene ID= ENSG00000168765.16 TPM= 27.51 Transcript Type= protein_coding
chr1	109656122	109665496	109656122	109665496	+	ENST00000326729.9@GSTM4	ENST00000326729.9	protein_coding	109656122,109656712,109657215,109657590,109657772,109658814,109659000,109665011	109656425,109656787,109657279,109657671,109657872,109658909,109659110,109665496	Gene ID= ENSG00000168765.16 TPM= 3.86 Transcript Type= protein_coding
chr1	109668066	109675286	109668066	109675286	+	ENST00000241337.8@GSTM2	ENST00000241337.8	protein_coding	109668066,109668425,109668925,109669290,109669471,109671287,109671473,109674747	109668151,109668500,109668989,109669371,109669571,109671382,109671583,109675286	Gene ID= ENSG00000213366.12 TPM= 45.37 Transcript Type= protein_coding
chr1	109687820	109693745	109687820	109693745	+	ENST00000309851.9@GSTM1	ENST00000309851.9	protein_coding	109687820,109688170,109688673,109689048,109689225,109690271,109690454,109693206	109687909,109688245,109688737,109689129,109689325,109690366,109690564,109693745	Gene ID= ENSG00000134184.12 TPM= 34.75 Transcript Type= protein_coding
chr1	109733932	109740516	109733932	109740516	-	ENST00000256594.7@GSTM3	ENST00000256594.7	protein_coding	109740240,109739833,109739429,109738285,109738091,109737656,109737457,109733932	109740516,109739908,109739493,109738366,109738191,109737751,109737567,109737169	Gene ID= ENSG00000134202.10 TPM= 4.83 Transcript Type= protein_coding
chr1	109736494	109741038	109736494	109741038	-	ENST00000361066.6@GSTM3	ENST00000361066.6	protein_coding	109740953,109740240,109739833,109739429,109738285,109738091,109737656,109737457,109736494	109741038,109740511,109739908,109739493,109738366,109738191,109737751,109737567,109737169	Gene ID= ENSG00000134202.10 TPM= 1.93 Transcript Type= protein_coding
chr1	109910633	109930992	109910633	109930992	+	ENST00000329608.10@CSF1	ENST00000329608.10	protein_coding	109910633,109914259,109915634,109917293,109921847,109923166,109924776,109925147,109928852	109911062,109914381,109915696,109917463,109921994,109924190,109924828,109925202,109930992	Gene ID= ENSG00000184371.13 TPM= 19.31 Transcript Type= protein_coding
chr1	109984686	110023735	109984686	110023735	+	ENST00000369799.9@AHCYL1	ENST00000369799.9	protein_coding	109984686,110009034,110011214,110012362,110012897,110014763,110015425,110016344,110016667,110017495,110017946,110018373,110018552,110019051,110019548,110020731,110021674	109985172,110009145,110011357,110012462,110012999,110014857,110015531,110016460,110016730,110017583,110018016,110018467,110018650,110019119,110019626,110020851,110023735	Gene ID= ENSG00000168710.17 TPM= 151.55 Transcript Type= protein_coding
chr1	109984762	110022400	109984762	110022400	+	transcript5761.chr1.nnic@AHCYL1	transcript5761.chr1.nnic	protein_coding	109984762,110009034,110011214,110012362,110012897,110014763,110015425,110016344,110016667,110017495,110017946,110018373,110018552,110019051,110019548,110021674	109985172,110009145,110011357,110012462,110012999,110014857,110015531,110016460,110016730,110017583,110018016,110018467,110018650,110019119,110019626,110022400	Gene ID= ENSG00000168710.17 TPM= 4.83 Transcript Type= NA
chr1	110004103	110005771	110004103	110005771	+	transcript5772.chr1.nnic@NA	transcript5772.chr1.nnic	NA	110004103	110005771	Gene ID= novel_gene_chr1_5773 TPM= 7.72 Transcript Type= NA
chr1	110034595	110054639	110034595	110054639	+	transcript5777.chr1.nnic@STRIP1	transcript5777.chr1.nnic	protein_coding	110034595,110037891,110038683,110039172,110039395,110040635,110041536,110041734,110043088,110043639,110044840,110045015,110046680,110047542,110047772,110049112,110050343,110050956,110051683,110053665	110034817,110037960,110038757,110039306,110039515,110040703,110041642,110041861,110043270,110043856,110044905,110045078,110046751,110047616,110047869,110049238,110050409,110051060,110051887,110054639	Gene ID= ENSG00000143093.14 TPM= 1.93 Transcript Type= NA
chr1	110034595	110054639	110034595	110054639	+	transcript5778.chr1.nic@STRIP1	transcript5778.chr1.nic	protein_coding	110034595,110037891,110038683,110039172,110039395,110040635,110041536,110041734,110043088,110043639,110044840,110045015,110046680,110047542,110047772,110049112,110050343,110050956,110051683,110053665	110034817,110037960,110038757,110039306,110039515,110040703,110041642,110041861,110043270,110043856,110044905,110045078,110046751,110047616,110047869,110049560,110050409,110051060,110051887,110054639	Gene ID= ENSG00000143093.14 TPM= 2.9 Transcript Type= NA
chr1	110034616	110054641	110034616	110054641	+	ENST00000369795.7@STRIP1	ENST00000369795.7	protein_coding	110034616,110037891,110038683,110039172,110039395,110040635,110041536,110041734,110043088,110043639,110044840,110045015,110046680,110047542,110047772,110049112,110049460,110050343,110050956,110051683,110053665	110034817,110037960,110038757,110039306,110039515,110040703,110041642,110041861,110043270,110043856,110044905,110045078,110046751,110047616,110047869,110049238,110049560,110050409,110051060,110051887,110054641	Gene ID= ENSG00000143093.14 TPM= 41.51 Transcript Type= protein_coding
chr1	110211714	110234044	110211714	110234044	+	transcript5790.chr1.nnic@KCNC4	transcript5790.chr1.nnic	protein_coding	110211714,110225975,110232911	110212177,110226178,110234044	Gene ID= ENSG00000116396.14 TPM= 1.93 Transcript Type= NA
chr1	110337402	110339049	110337402	110339049	-	transcript5793.chr1.nnic@NA	transcript5793.chr1.nnic	NA	110337402	110339049	Gene ID= novel_gene_chr1_5794 TPM= 6.76 Transcript Type= NA
chr1	110339323	110346677	110339323	110346677	+	ENST00000487146.6@RBM15	ENST00000487146.6	protein_coding	110339323,110346308	110342268,110346677	Gene ID= ENSG00000162775.14 TPM= 24.13 Transcript Type= protein_coding
chr1	110339426	110346675	110339426	110346675	+	transcript5800.chr1.nnic@NA	transcript5800.chr1.nnic	NA	110339426	110346675	Gene ID= novel_gene_chr1_5801 TPM= 22.2 Transcript Type= NA
chr1	110401249	110407668	110401249	110407668	-	ENST00000483260.5@LAMTOR5	ENST00000483260.5	protein_coding	110407586,110407033,110406318,110403919,110401249	110407668,110407128,110406379,110404036,110401583	Gene ID= ENSG00000134248.13 TPM= 1.77 Transcript Type= protein_coding
chr1	110401249	110407671	110401249	110407671	-	ENST00000474861.6@LAMTOR5	ENST00000474861.6	protein_coding	110407033,110406318,110403919,110401249	110407671,110406379,110404036,110401583	Gene ID= ENSG00000134248.13 TPM= 3.21 Transcript Type= protein_coding
chr1	110401253	110407942	110401253	110407942	-	ENST00000256644.8@LAMTOR5	ENST00000256644.8	protein_coding	110407586,110406318,110403919,110401253	110407942,110406379,110404036,110401583	Gene ID= ENSG00000134248.13 TPM= 95.4 Transcript Type= protein_coding
chr1	110877038	110963965	110877038	110963965	-	transcript5812.chr1.nnic@LRIF1	transcript5812.chr1.nnic	protein_coding	110963621,110949851,110877038	110963965,110950123,110877685	Gene ID= ENSG00000121931.15 TPM= 1.93 Transcript Type= NA
chr1	110947185	110964079	110947185	110964079	-	ENST00000369763.4@LRIF1	ENST00000369763.4	protein_coding	110963621,110951288,110949851,110947185	110964079,110952815,110950123,110948399	Gene ID= ENSG00000121931.15 TPM= 1.93 Transcript Type= protein_coding
chr1	110947222	110963965	110947222	110963965	-	ENST00000485275.2@LRIF1	ENST00000485275.2	protein_coding	110963621,110949851,110947222	110963965,110950123,110948399	Gene ID= ENSG00000121931.15 TPM= 2.9 Transcript Type= protein_coding
chr1	111117333	111140093	111117333	111140093	-	transcript5825.chr1.nic@DRAM2	transcript5825.chr1.nic	protein_coding	111140038,111139501,111137523,111131424,111126227,111124742,111120516,111119877,111118805,111117333	111140093,111139711,111137586,111131568,111126294,111124881,111120693,111119959,111118897,111118267	Gene ID= ENSG00000156171.14 TPM= 1.93 Transcript Type= NA
chr1	111117907	111140162	111117907	111140162	-	transcript5826.chr1.nic@DRAM2	transcript5826.chr1.nic	protein_coding	111140038,111139501,111137523,111131424,111126227,111122616,111120516,111119877,111118805,111117907	111140162,111139666,111137586,111131568,111126294,111122643,111120693,111119959,111118897,111118267	Gene ID= ENSG00000156171.14 TPM= 1.93 Transcript Type= NA
chr1	111140206	111185102	111140206	111185102	+	transcript5822.chr1.nnic@CEPT1	transcript5822.chr1.nnic	protein_coding	111140206,111147642,111159380,111161155,111173114,111174879,111182187,111182799,111183462,111184191	111140307,111148053,111159527,111161296,111173258,111174963,111182318,111182957,111183587,111185102	Gene ID= ENSG00000134255.13 TPM= 1.93 Transcript Type= NA
chr1	111140206	111185102	111140206	111185102	+	transcript5833.chr1.nnic@CEPT1	transcript5833.chr1.nnic	protein_coding	111140206,111147642,111159380,111161155,111167106,111182187,111182799,111183462,111184191	111140307,111148053,111159527,111161296,111167190,111182318,111182957,111183587,111185102	Gene ID= ENSG00000134255.13 TPM= 1.93 Transcript Type= NA
chr1	111140206	111185102	111140206	111185102	+	transcript5836.chr1.nnic@CEPT1	transcript5836.chr1.nnic	protein_coding	111140206,111147642,111159380,111161155,111182187,111182799,111183462,111184191	111140307,111148053,111159527,111161296,111182318,111182957,111183587,111185102	Gene ID= ENSG00000134255.13 TPM= 3.86 Transcript Type= NA
chr1	111140226	111185102	111140226	111185102	+	ENST00000357172.8@CEPT1	ENST00000357172.8	protein_coding	111140226,111147642,111159380,111161155,111174879,111182187,111182799,111183462,111184191	111140307,111148053,111159527,111161296,111174963,111182318,111182957,111183587,111185102	Gene ID= ENSG00000134255.13 TPM= 1.93 Transcript Type= protein_coding
chr1	111440279	111449297	111440279	111449297	-	transcript5844.chr1.nic@WDR77	transcript5844.chr1.nic	protein_coding	111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111442025,111441499,111440279	111449297,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093,111441604,111441389	Gene ID= ENSG00000116455.13 TPM= 3.86 Transcript Type= NA
chr1	111439890	111449376	111439890	111449376	-	ENST00000235090.9@WDR77	ENST00000235090.9	protein_coding	111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111442025,111439890	111449376,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093,111441389	Gene ID= ENSG00000116455.13 TPM= 71.43 Transcript Type= protein_coding
chr1	111440274	111449297	111440274	111449297	-	transcript5854.chr1.nic@WDR77	transcript5854.chr1.nic	protein_coding	111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111440274	111449297,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093	Gene ID= ENSG00000116455.13 TPM= 2.9 Transcript Type= NA
chr1	111448936	111462773	111448936	111462773	+	ENST00000369722.7@ATP5F1	ENST00000369722.7	protein_coding	111448936,111449837,111454211,111456086,111456630,111459457,111460917	111449581,111449873,111454356,111456249,111456755,111459636,111462773	Gene ID= ENSG00000116459.10 TPM= 212.37 Transcript Type= protein_coding
chr1	111449465	111461332	111449465	111461332	+	ENST00000369721.8@ATP5F1	ENST00000369721.8	protein_coding	111449465,111449837,111456086,111456630,111459457,111460917	111449581,111449873,111456249,111456755,111459636,111461332	Gene ID= ENSG00000116459.10 TPM= 13.51 Transcript Type= processed_transcript
chr1	111464994	111466747	111464994	111466747	+	transcript5867.chr1.nnic@NA	transcript5867.chr1.nnic	NA	111464994	111466747	Gene ID= novel_gene_chr1_5868 TPM= 1.93 Transcript Type= NA
chr1	111619766	111713113	111619766	111713113	+	transcript5879.chr1.nic@RAP1A	transcript5879.chr1.nic	protein_coding	111619766,111627470,111691334,111695341,111697441,111703336,111704343,111709149,111712431	111619934,111627563,111691417,111695409,111697497,111703476,111704486,111709264,111713113	Gene ID= ENSG00000116473.14 TPM= 4.83 Transcript Type= NA
chr1	111619740	111713113	111619740	111713113	+	transcript5882.chr1.nnic@RAP1A	transcript5882.chr1.nnic	protein_coding	111619740,111691334,111695345,111697441,111703336,111704343,111709149,111712431	111619934,111691364,111695409,111697497,111703476,111704486,111709264,111713113	Gene ID= ENSG00000116473.14 TPM= 1.93 Transcript Type= NA
chr1	111619783	111716691	111619783	111716691	+	ENST00000369709.3@RAP1A	ENST00000369709.3	protein_coding	111619783,111691334,111695341,111697441,111703336,111704343,111709149,111712431	111619934,111691417,111695409,111697497,111703476,111704486,111709264,111716691	Gene ID= ENSG00000116473.14 TPM= 5.79 Transcript Type= protein_coding
chr1	111722064	111739424	111722064	111739424	-	ENST00000357260.5@FAM212B	ENST00000357260.5	protein_coding	111739186,111722064	111739424,111727804	Gene ID= ENSG00000197852.9 TPM= 2.9 Transcript Type= protein_coding
chr1	111733679	111735187	111733679	111735187	+	transcript5890.chr1.nnic@NA	transcript5890.chr1.nnic	NA	111733679	111735187	Gene ID= novel_gene_chr1_5891 TPM= 1.93 Transcript Type= NA
chr1	111755305	111768016	111755305	111768016	+	ENST00000369702.4@DDX20	ENST00000369702.4	protein_coding	111755305,111756646,111759400,111760474,111760706,111760987,111761226,111762255,111762677,111762906,111765737	111756225,111756740,111759568,111760588,111760848,111761125,111761284,111762337,111762782,111763007,111768016	Gene ID= ENSG00000064703.11 TPM= 31.86 Transcript Type= protein_coding
chr1	111830747	111989644	111830747	111989644	-	transcript5896.chr1.nnic@KCND3	transcript5896.chr1.nnic	protein_coding	111989505,111981621,111830747	111989644,111982798,111831131	Gene ID= ENSG00000171385.9 TPM= 1.93 Transcript Type= NA
chr1	112523518	112619418	112523518	112619418	-	ENST00000358039.8@ST7L	ENST00000358039.8	protein_coding	112618909,112616813,112610841,112600794,112597971,112591525,112583972,112582375,112581992,112578345,112576986,112555868,112550601,112541951,112523518	112619418,112616895,112611003,112600848,112598086,112591603,112584126,112582472,112582106,112578417,112577088,112556018,112550693,112542090,112526111	Gene ID= ENSG00000007341.18 TPM= 1.45 Transcript Type= protein_coding
chr1	112523518	112619189	112523518	112619189	-	ENST00000360743.8@ST7L	ENST00000360743.8	protein_coding	112618909,112616813,112610841,112600794,112597971,112591525,112583972,112582375,112581992,112578345,112576986,112555868,112541951,112523518	112619189,112616895,112611003,112600848,112598086,112591603,112584126,112582472,112582106,112578417,112577088,112556018,112542090,112526111	Gene ID= ENSG00000007341.18 TPM= 2.41 Transcript Type= protein_coding
chr1	112610459	112619774	112610459	112619774	-	ENST00000467335.5@ST7L	ENST00000467335.5	protein_coding	112619644,112618909,112616813,112610459	112619774,112619139,112616895,112611003	Gene ID= ENSG00000007341.18 TPM= 2.9 Transcript Type= processed_transcript
chr1	112619759	112671619	112619759	112671619	+	transcript5915.chr1.nnic@CAPZA1	transcript5915.chr1.nnic	protein_coding	112619759,112647210,112649418,112653598,112654465,112659022,112659701,112666629,112667074,112669543,112669992	112619883,112647273,112649469,112653661,112654671,112659101,112659779,112666682,112667145,112669605,112671619	Gene ID= ENSG00000116489.12 TPM= 11.42 Transcript Type= NA
chr1	112619173	112671619	112619173	112671619	+	ENST00000263168.3@CAPZA1	ENST00000263168.3	protein_coding	112619173,112647210,112649418,112653598,112654465,112659022,112659701,112667074,112669543,112669992	112619883,112647273,112649469,112653661,112654671,112659101,112659779,112667145,112669605,112671619	Gene ID= ENSG00000116489.12 TPM= 29.28 Transcript Type= protein_coding
chr1	112674487	112700739	112674487	112700739	+	ENST00000369645.5@MOV10	ENST00000369645.5	protein_coding	112674487,112674848,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416	112674729,112675049,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112700739	Gene ID= ENSG00000155363.18 TPM= 1.93 Transcript Type= protein_coding
chr1	112701106	112707403	112701106	112707403	-	ENST00000339083.11@RHOC	ENST00000339083.11	protein_coding	112707078,112705100,112703644,112702999,112702563,112701106	112707403,112705168,112703806,112703119,112702693,112701713	Gene ID= ENSG00000155366.16 TPM= 36.2 Transcript Type= protein_coding
chr1	112701131	112707434	112701131	112707434	-	ENST00000369642.7@RHOC	ENST00000369642.7	protein_coding	112707078,112703644,112702999,112702563,112701131	112707434,112703806,112703119,112702693,112701713	Gene ID= ENSG00000155366.16 TPM= 13.03 Transcript Type= protein_coding
chr1	112709994	112715477	112709994	112715477	-	ENST00000309276.10@PPM1J	ENST00000309276.10	protein_coding	112714976,112713497,112712744,112712345,112711971,112711266,112711008,112710744,112710460,112709994	112715477,112713611,112713031,112712457,112712055,112711384,112711071,112710851,112710611,112710310	Gene ID= ENSG00000155367.15 TPM= 24.13 Transcript Type= protein_coding
chr1	113749229	113759779	113749229	113759779	-	transcript5970.chr1.nic@PHTF1	transcript5970.chr1.nic	protein_coding	113759023,113758659,113757699,113749229	113759779,113758733,113757755,113749589	Gene ID= ENSG00000116793.15 TPM= 1.93 Transcript Type= NA
chr1	113697205	113759476	113697205	113759476	-	ENST00000369604.5@PHTF1	ENST00000369604.5	protein_coding	113759023,113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705890,113704666,113704081,113700794,113699704,113698262,113697205	113759476,113758733,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162,113704797,113704167,113700949,113699799,113698387,113697725	Gene ID= ENSG00000116793.15 TPM= 2.9 Transcript Type= protein_coding
chr1	113797985	113812300	113797985	113812300	-	transcript5978.chr1.nic@RSBN1	transcript5978.chr1.nic	protein_coding	113811710,113797985	113812300,113798036	Gene ID= ENSG00000081019.13 TPM= 32.82 Transcript Type= NA
chr1	113894748	113904998	113894748	113904998	-	ENST00000369569.5@AP4B1	ENST00000369569.5	protein_coding	113904605,113902638,113901755,113901236,113899904,113898718,113897840,113896258,113895757,113894748	113904998,113902862,113901885,113901383,113900400,113898801,113897943,113896465,113896038,113895492	Gene ID= ENSG00000134262.12 TPM= 1.93 Transcript Type= protein_coding
chr1	113895060	113905046	113895060	113905046	-	transcript5984.chr1.nnic@AP4B1	transcript5984.chr1.nnic	protein_coding	113904942,113904605,113902638,113901755,113901236,113899904,113898718,113897840,113895757,113895060	113905046,113904793,113902862,113901885,113901383,113900400,113898801,113897943,113896038,113895492	Gene ID= ENSG00000134262.12 TPM= 2.9 Transcript Type= NA
chr1	113895060	113904833	113895060	113904833	-	transcript5987.chr1.nnic@AP4B1	transcript5987.chr1.nnic	protein_coding	113904605,113902638,113901755,113901236,113899904,113898718,113895757,113895060	113904833,113902862,113901885,113901383,113900400,113898801,113896038,113895492	Gene ID= ENSG00000134262.12 TPM= 1.93 Transcript Type= NA
chr1	113905141	113914086	113905141	113914086	+	ENST00000369563.3@DCLRE1B	ENST00000369563.3	protein_coding	113905141,113906996,113908009,113911131	113905775,113907161,113908191,113914086	Gene ID= ENSG00000118655.4 TPM= 1.93 Transcript Type= protein_coding
chr1	113979391	113982254	113979391	113982254	+	ENST00000393300.6@OLFML3	ENST00000393300.6	protein_coding	113979391,113980203,113980949	113979630,113980617,113982254	Gene ID= ENSG00000116774.11 TPM= 6.76 Transcript Type= protein_coding
chr1	113979443	113982254	113979443	113982254	+	ENST00000320334.4@OLFML3	ENST00000320334.4	protein_coding	113979443,113980332,113980949	113979630,113980617,113982254	Gene ID= ENSG00000116774.11 TPM= 9.65 Transcript Type= protein_coding
chr1	114397608	114511224	114397608	114511224	-	transcript5998.chr1.nic@TRIM33	transcript5998.chr1.nic	protein_coding	114510551,114464270,114463412,114463104,114433617,114430798,114427748,114427177,114425449,114424591,114421436,114420380,114410184,114408677,114406941,114405410,114402760,114401389,114399457,114397940,114397608	114511224,114464388,114463556,114463236,114433733,114430912,114427894,114427294,114425723,114424755,114421636,114420451,114410316,114408740,114407100,114405759,114402883,114401463,114399609,114397990,114397860	Gene ID= ENSG00000197323.11 TPM= 4.83 Transcript Type= NA
chr1	114397608	114511224	114397608	114511224	-	transcript6002.chr1.nic@TRIM33	transcript6002.chr1.nic	protein_coding	114510551,114464270,114463412,114463104,114433617,114430798,114427748,114427177,114425449,114424591,114421436,114420380,114410184,114408677,114406941,114405410,114402760,114401389,114399457,114397608	114511224,114464388,114463556,114463236,114433733,114430912,114427894,114427294,114425723,114424755,114421636,114420451,114410316,114408740,114407100,114405759,114402883,114401463,114399609,114397860	Gene ID= ENSG00000197323.11 TPM= 2.9 Transcript Type= NA
chr1	114397608	114511160	114397608	114511160	-	ENST00000369543.6@TRIM33	ENST00000369543.6	protein_coding	114510551,114464270,114463412,114463104,114433617,114430798,114427748,114427177,114425449,114424591,114421436,114410184,114408677,114406941,114405410,114402760,114401389,114399457,114397608	114511160,114464388,114463556,114463236,114433733,114430912,114427894,114427294,114425723,114424755,114421636,114410316,114408740,114407100,114405759,114402883,114401463,114399609,114397860	Gene ID= ENSG00000197323.11 TPM= 4.83 Transcript Type= protein_coding
chr1	114567557	114581639	114567557	114581639	-	ENST00000369541.3@BCAS2	ENST00000369541.3	protein_coding	114581499,114581299,114576688,114575590,114570700,114569992,114567557	114581639,114581391,114576758,114575751,114570750,114570072,114568256	Gene ID= ENSG00000116752.5 TPM= 30.89 Transcript Type= protein_coding
chr1	114584275	114670067	114584275	114670067	-	transcript6025.chr1.nic@DENND2C	transcript6025.chr1.nic	protein_coding	114669983,114625179,114623507,114622987,114621895,114618386,114611073,114608686,114604922,114602125,114601508,114600820,114600204,114599274,114595832,114594473,114587716,114587387,114584275	114670067,114626188,114623643,114623099,114622065,114618482,114611117,114608873,114605031,114602194,114601585,114600960,114600352,114599451,114595873,114594578,114587952,114587473,114585631	Gene ID= ENSG00000175984.14 TPM= 2.9 Transcript Type= NA
chr1	114667669	114670111	114667669	114670111	-	transcript6027.chr1.nnic@NA	transcript6027.chr1.nnic	NA	114667669	114670111	Gene ID= novel_gene_chr1_6028 TPM= 2.9 Transcript Type= NA
chr1	114673098	114695586	114673098	114695586	-	ENST00000520113.6@AMPD1	ENST00000520113.6	protein_coding	114695450,114693436,114688561,114686745,114684199,114680259,114679579,114678333,114677910,114677351,114675877,114675530,114674752,114673909,114673639,114673098	114695586,114693447,114688741,114686910,114684364,114680478,114679708,114678527,114678041,114677514,114676003,114675693,114674872,114674082,114673749,114673272	Gene ID= ENSG00000116748.21 TPM= 46.82 Transcript Type= protein_coding
chr1	114673101	114695618	114673101	114695618	-	ENST00000369538.3@AMPD1	ENST00000369538.3	protein_coding	114695450,114688561,114686745,114684199,114680259,114679579,114678333,114677910,114677351,114675877,114675530,114674752,114673909,114673639,114673101	114695618,114688741,114686910,114684364,114680478,114679708,114678527,114678041,114677514,114676003,114675693,114674872,114674082,114673749,114673272	Gene ID= ENSG00000116748.21 TPM= 13.03 Transcript Type= protein_coding
chr1	114704469	114716894	114704469	114716894	-	ENST00000369535.4@NRAS	ENST00000369535.4	protein_coding	114716658,114716050,114713800,114709569,114708531,114708154,114704469	114716894,114716177,114713978,114709728,114708654,114708192,114708050	Gene ID= ENSG00000213281.4 TPM= 6.76 Transcript Type= protein_coding
chr1	114716914	114758050	114716914	114758050	-	ENST00000610726.4@CSDE1	ENST00000610726.4	protein_coding	114757925,114749821,114741527,114739692,114737963,114737471,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114716914	114758050,114750207,114741673,114739890,114738072,114737563,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 31.11 Transcript Type= protein_coding
chr1	114717312	114758003	114717312	114758003	-	ENST00000369530.5@CSDE1	ENST00000369530.5	protein_coding	114757925,114749821,114741527,114739692,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114717312	114758003,114750207,114741673,114739890,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 228.4 Transcript Type= protein_coding
chr1	114716913	114757983	114716913	114757983	-	ENST00000339438.10@CSDE1	ENST00000339438.10	protein_coding	114757925,114749821,114739692,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114716913	114757983,114750207,114739890,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 31.94 Transcript Type= protein_coding
chr1	114717295	114757974	114717295	114757974	-	ENST00000261443.9@CSDE1	ENST00000261443.9	protein_coding	114757925,114739692,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114717295	114757974,114739890,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 4.47 Transcript Type= protein_coding
chr1	114717305	114758027	114717305	114758027	-	ENST00000530886.5@CSDE1	ENST00000530886.5	protein_coding	114757925,114749821,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114717305	114758027,114750207,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 2.52 Transcript Type= protein_coding
chr1	114769479	114780685	114769479	114780685	-	ENST00000369528.9@SIKE1	ENST00000369528.9	protein_coding	114780437,114780110,114779142,114776346,114769479	114780685,114780215,114779284,114776459,114774372	Gene ID= ENSG00000052723.11 TPM= 5.79 Transcript Type= protein_coding
chr1	114772775	114780677	114772775	114780677	-	ENST00000060969.5@SIKE1	ENST00000060969.5	protein_coding	114780449,114780110,114779142,114776346,114772775	114780677,114780215,114779284,114776459,114774372	Gene ID= ENSG00000052723.11 TPM= 3.86 Transcript Type= protein_coding
chr1	114779107	114780685	114779107	114780685	-	ENST00000466657.1@SIKE1	ENST00000466657.1	protein_coding	114780449,114779107	114780685,114779284	Gene ID= ENSG00000052723.11 TPM= 1.45 Transcript Type= processed_transcript
chr1	114779107	114780634	114779107	114780634	-	ENST00000475335.5@SIKE1	ENST00000475335.5	protein_coding	114780449,114780110,114779107	114780634,114780215,114779284	Gene ID= ENSG00000052723.11 TPM= 11.1 Transcript Type= processed_transcript
chr1	115700007	115768781	115700007	115768781	-	ENST00000261448.5@CASQ2	ENST00000261448.5	protein_coding	115768308,115744828,115740728,115738224,115732901,115726992,115725508,115717840,115705192,115702921,115700007	115768781,115744912,115740828,115738335,115732974,115727122,115725553,115717894,115705292,115702995,115701426	Gene ID= ENSG00000118729.11 TPM= 56.95 Transcript Type= protein_coding
chr1	116373867	116404772	116373867	116404772	+	ENST00000537345.5@ATP1A1	ENST00000537345.5	protein_coding	116373867,116384014,116384783,116387288,116388131,116388638,116388902,116389439,116390213,116390782,116392854,116393531,116395110,116396598,116397888,116398621,116398930,116399420,116400861,116401130,116401554,116403884,116404416	116374241,116384124,116384842,116387491,116388244,116388772,116389019,116389707,116390411,116390891,116392988,116393723,116395285,116396734,116398038,116398789,116399084,116399543,116401006,116401260,116401655,116403975,116404772	Gene ID= ENSG00000163399.15 TPM= 57.6 Transcript Type= protein_coding
chr1	116373260	116404774	116373260	116404774	+	ENST00000295598.9@ATP1A1	ENST00000295598.9	protein_coding	116373260,116384014,116384783,116387288,116388131,116388638,116388902,116389439,116390213,116390782,116392854,116393531,116395110,116396598,116397888,116398621,116398930,116399420,116400861,116401130,116401554,116403884,116404416	116373523,116384124,116384842,116387491,116388244,116388772,116389019,116389707,116390411,116390891,116392988,116393723,116395285,116396734,116398038,116398789,116399084,116399543,116401006,116401260,116401655,116403975,116404774	Gene ID= ENSG00000163399.15 TPM= 395.46 Transcript Type= protein_coding
chr1	116373269	116386144	116373269	116386144	+	ENST00000488733.1@ATP1A1	ENST00000488733.1	protein_coding	116373269,116384014,116384783	116373523,116384124,116386144	Gene ID= ENSG00000163399.15 TPM= 4.83 Transcript Type= retained_intron
chr1	116373270	116375141	116373270	116375141	+	transcript6162.chr1.nnic@NA	transcript6162.chr1.nnic	NA	116373270	116375141	Gene ID= novel_gene_chr1_6163 TPM= 5.79 Transcript Type= NA
chr1	116514533	116517044	116514533	116517044	-	transcript6172.chr1.nnic@NA	transcript6172.chr1.nnic	NA	116514533	116517044	Gene ID= novel_gene_chr1_6173 TPM= 1.93 Transcript Type= NA
chr1	116514535	116571039	116514535	116571039	-	ENST00000369489.9@CD58	ENST00000369489.9	protein_coding	116570903,116544311,116535965,116521906,116519231,116514535	116571039,116544604,116536228,116521983,116519267,116514822	Gene ID= ENSG00000116815.15 TPM= 7.72 Transcript Type= protein_coding
chr1	116521787	116571039	116521787	116571039	-	ENST00000369487.3@CD58	ENST00000369487.3	protein_coding	116570903,116544311,116535965,116521787	116571039,116544604,116536228,116521983	Gene ID= ENSG00000116815.15 TPM= 1.93 Transcript Type= protein_coding
chr1	117060315	117076389	117060315	117076389	+	transcript6181.chr1.nic@TTF2	transcript6181.chr1.nic	protein_coding	117060315,117060455,117062387,117073661,117074870,117076180	117060374,117060557,117062473,117073727,117075859,117076389	Gene ID= ENSG00000116830.11 TPM= 1.93 Transcript Type= NA
chr1	117111060	117121728	117111060	117121728	-	ENST00000256649.8@TRIM45	ENST00000256649.8	protein_coding	117120714,117118034,117116616,117115575,117113359,117111060	117121728,117118767,117116745,117115689,117113485,117112453	Gene ID= ENSG00000134253.9 TPM= 5.79 Transcript Type= protein_coding
chr1	117366832	117423697	117366832	117423697	+	transcript6195.chr1.nnic@MAN1A2	transcript6195.chr1.nnic	protein_coding	117366832,117402186,117405549,117414713,117420569,117421456	117368485,117402441,117405645,117414831,117420649,117423697	Gene ID= ENSG00000198162.12 TPM= 2.9 Transcript Type= NA
chr1	117366830	117423693	117366830	117423693	+	transcript6199.chr1.nic@MAN1A2	transcript6199.chr1.nic	protein_coding	117366830,117402186,117405549,117414713,117420569	117368485,117402441,117405645,117414831,117423693	Gene ID= ENSG00000198162.12 TPM= 4.83 Transcript Type= NA
chr1	117366910	117408322	117366910	117408322	+	transcript6200.chr1.nic@MAN1A2	transcript6200.chr1.nic	protein_coding	117366910,117402186,117405549	117368485,117402441,117408322	Gene ID= ENSG00000198162.12 TPM= 1.93 Transcript Type= NA
chr1	117605934	117628372	117605934	117628372	+	ENST00000369448.3@FAM46C	ENST00000369448.3	protein_coding	117605934,117622842	117606153,117628372	Gene ID= ENSG00000183508.4 TPM= 8.69 Transcript Type= protein_coding
chr1	117863485	117929630	117863485	117929630	-	ENST00000369443.9@GDAP2	ENST00000369443.9	protein_coding	117929448,117920182,117918597,117912530,117911994,117906506,117899057,117896833,117887698,117886577,117883488,117881823,117878009,117863485	117929630,117920424,117918736,117912683,117912082,117906582,117899216,117896989,117887774,117886653,117883627,117881877,117878152,117870616	Gene ID= ENSG00000196505.10 TPM= 4.83 Transcript Type= protein_coding
chr1	117929764	117960060	117929764	117960060	+	transcript6218.chr1.nic@WDR3	transcript6218.chr1.nic	protein_coding	117929764,117933288,117934473,117936769,117938480,117939477,117940827,117941124,117941750,117942437,117943396,117946086,117948405,117949751,117949995,117950834,117951976,117952297,117952528,117952946,117953476,117954007,117954580,117955315,117957068,117958910,117959292	117929924,117933490,117934682,117936887,117938558,117939572,117940940,117941225,117941847,117942544,117943626,117946179,117948506,117949836,117950130,117950890,117952076,117952408,117952662,117952996,117953541,117954099,117954627,117955358,117957196,117959003,117960060	Gene ID= ENSG00000065183.15 TPM= 16.41 Transcript Type= NA
chr1	118883047	118988343	118883047	118988343	-	transcript6235.chr1.nic@TBX15	transcript6235.chr1.nic	protein_coding	118987591,118931619,118926510,118924646,118923436,118914115,118899028,118890867,118883047	118988343,118931832,118926611,118924817,118923603,118914179,118899125,118890965,118885516	Gene ID= ENSG00000092607.13 TPM= 112.29 Transcript Type= NA
chr1	118883047	118944704	118883047	118944704	-	transcript6241.chr1.nnic@TBX15	transcript6241.chr1.nnic	protein_coding	118944484,118931619,118926510,118924646,118923436,118914115,118899028,118883047	118944704,118931832,118926611,118924817,118923603,118914179,118899125,118885516	Gene ID= ENSG00000092607.13 TPM= 112.78 Transcript Type= NA
chr1	118983887	118988180	118983887	118988180	-	transcript6246.chr1.nnic@TBX15	transcript6246.chr1.nnic	protein_coding	118987591,118983887	118988180,118984937	Gene ID= ENSG00000092607.13 TPM= 1.93 Transcript Type= NA
chr1	118883047	118987805	118883047	118987805	-	ENST00000369429.3@TBX15	ENST00000369429.3	protein_coding	118987591,118931619,118926510,118924646,118923436,118914115,118899028,118883047	118987805,118931832,118926611,118924817,118923603,118914179,118899125,118885516	Gene ID= ENSG00000092607.13 TPM= 110.85 Transcript Type= protein_coding
chr1	118985164	118987880	118985164	118987880	-	transcript6247.chr1.nnic@NA	transcript6247.chr1.nnic	NA	118985164	118987880	Gene ID= novel_gene_chr1_6248 TPM= 1.93 Transcript Type= NA
chr1	119031221	119140671	119031221	119140671	-	ENST00000235521.4@WARS2	ENST00000235521.4	protein_coding	119140555,119076350,119045582,119042264,119034095,119031221	119140671,119076607,119045662,119042349,119034213,119033359	Gene ID= ENSG00000116874.11 TPM= 11.58 Transcript Type= protein_coding
chr1	119711715	119744226	119711715	119744226	+	ENST00000641023.1@PHGDH	ENST00000641023.1	protein_coding	119711715,119721170,119723376,119726851,119727004,119734634,119735295,119737114,119740386,119741767,119742807,119743886	119712160,119721321,119723441,119726905,119727102,119734766,119735443,119737266,119740518,119741897,119743044,119744226	Gene ID= ENSG00000092621.12 TPM= 1.93 Transcript Type= protein_coding
chr1	119912053	119915720	119912053	119915720	-	transcript6257.chr1.nnic@NA	transcript6257.chr1.nnic	NA	119912053	119915720	Gene ID= novel_gene_chr1_6258 TPM= 1.93 Transcript Type= NA
chr1	120232983	120320116	120232983	120320116	+	transcript6272.chr1.nnic@AC244669.2	transcript6272.chr1.nnic	unprocessed_pseudogene	120232983,120251414,120254575,120256603,120277926,120319191,120319504	120233347,120251469,120254669,120256754,120278036,120319314,120320116	Gene ID= ENSG00000274642.1 TPM= 4.83 Transcript Type= NA
chr1	120232983	120320116	120232983	120320116	+	transcript6274.chr1.nnic@AC244669.2	transcript6274.chr1.nnic	unprocessed_pseudogene	120232983,120251414,120256603,120277926,120319504	120233347,120251469,120256754,120278036,120320116	Gene ID= ENSG00000274642.1 TPM= 4.1 Transcript Type= NA
chr1	120277702	120330897	120277702	120330897	+	transcript6277.chr1.nnic@AC244669.2	transcript6277.chr1.nnic	unprocessed_pseudogene	120277702,120319191,120319504,120327435	120278036,120319314,120319679,120330897	Gene ID= ENSG00000274642.1 TPM= 7.72 Transcript Type= NA
chr1	120277702	120330898	120277702	120330898	+	transcript6278.chr1.nnic@AC244669.2	transcript6278.chr1.nnic	unprocessed_pseudogene	120277702,120319191,120319504,120329178	120278036,120319314,120319679,120330898	Gene ID= ENSG00000274642.1 TPM= 12.55 Transcript Type= NA
chr1	120277646	120320467	120277646	120320467	+	transcript6283.chr1.nic@AC244669.2	transcript6283.chr1.nic	unprocessed_pseudogene	120277646,120319191,120319504	120278036,120319314,120320467	Gene ID= ENSG00000274642.1 TPM= 8.21 Transcript Type= NA
chr1	120277703	120327681	120277703	120327681	+	transcript6285.chr1.nnic@AC244669.2	transcript6285.chr1.nnic	unprocessed_pseudogene	120277703,120319504,120327435	120278036,120319679,120327681	Gene ID= ENSG00000274642.1 TPM= 3.86 Transcript Type= NA
chr1	120528390	120620689	120528390	120620689	-	transcript6310.chr1.nnic@AC241952.1	transcript6310.chr1.nnic	transcribed_unprocessed_pseudogene	120620355,120579071,120578706,120573072,120550145,120548973,120548641,120548289,120545281,120544267,120543947,120543017,120541892,120538571,120538323,120536311,120531878,120530296,120528390	120620689,120579194,120578881,120573189,120550276,120549092,120548733,120548501,120545439,120544380,120544084,120543196,120542086,120538735,120538404,120536402,120532089,120530384,120530014	Gene ID= ENSG00000275131.2 TPM= 9.2 Transcript Type= NA
chr1	120528387	120620686	120528387	120620686	-	transcript6312.chr1.nic@AC241952.1	transcript6312.chr1.nic	transcribed_unprocessed_pseudogene	120620355,120579071,120578706,120573072,120550145,120548973,120548641,120548289,120545281,120544267,120543947,120543017,120541892,120538571,120538323,120536311,120531878,120528387	120620686,120579194,120578881,120573189,120550276,120549092,120548733,120548501,120545439,120544380,120544084,120543196,120542086,120538735,120538404,120536402,120532089,120530384	Gene ID= ENSG00000275131.2 TPM= 9.2 Transcript Type= NA
chr1	120536371	120620688	120536371	120620688	-	transcript6318.chr1.nnic@AC241952.1	transcript6318.chr1.nnic	transcribed_unprocessed_pseudogene	120620355,120578706,120573072,120550145,120548973,120548641,120548289,120545281,120544267,120543947,120543017,120541892,120538571,120538323,120536371	120620688,120578881,120573189,120550276,120549092,120548733,120548501,120545439,120544380,120544084,120543196,120542086,120538735,120538404,120536402	Gene ID= ENSG00000275131.2 TPM= 2.68 Transcript Type= NA
chr1	120536371	120620689	120536371	120620689	-	transcript6319.chr1.nnic@AC241952.1	transcript6319.chr1.nnic	transcribed_unprocessed_pseudogene	120620355,120573072,120550145,120548973,120548641,120548289,120545281,120544267,120543947,120543017,120541892,120538571,120538323,120536371	120620689,120573189,120550276,120549092,120548733,120548501,120545439,120544380,120544084,120543196,120542086,120538735,120538404,120536402	Gene ID= ENSG00000275131.2 TPM= 2.49 Transcript Type= NA
chr1	120568623	120620686	120568623	120620686	-	transcript6323.chr1.nnic@AC241952.1	transcript6323.chr1.nnic	transcribed_unprocessed_pseudogene	120620355,120579071,120578706,120573072,120568623	120620686,120579194,120578881,120573189,120569133	Gene ID= ENSG00000275131.2 TPM= 5.56 Transcript Type= NA
chr1	145607990	145670463	145607990	145670463	+	ENST00000460277.5@GPR89A	ENST00000460277.5	protein_coding	145607990,145616234,145618320,145623054,145623593,145630687,145631664,145643869,145646184,145647175,145663329,145665562,145669625,145669834	145608175,145616293,145618423,145623160,145623714,145630807,145631744,145643978,145646272,145647267,145663424,145665651,145669690,145670463	Gene ID= ENSG00000117262.18 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr1	145607990	145670648	145607990	145670648	+	ENST00000313835.13@GPR89A	ENST00000313835.13	protein_coding	145607990,145616234,145618320,145623054,145623613,145630687,145631664,145643869,145646184,145647175,145663329,145665562,145669625,145669834	145608175,145616293,145618423,145623160,145623714,145630807,145631744,145643978,145646272,145647267,145663424,145665651,145669690,145670648	Gene ID= ENSG00000117262.18 TPM= 9.65 Transcript Type= protein_coding
chr1	145746304	145823987	145746304	145823987	-	transcript6353.chr1.nnic@RNF115	transcript6353.chr1.nnic	protein_coding	145823772,145788908,145787012,145784539,145771711,145752978,145751438,145750407,145747995,145746304	145823987,145788966,145787063,145784596,145771919,145753049,145751510,145750500,145748110,145746997	Gene ID= ENSG00000265491.4 TPM= 18.78 Transcript Type= NA
chr1	145742187	145745566	145742187	145745566	-	transcript6373.chr1.nnic@NA	transcript6373.chr1.nnic	NA	145742187	145745566	Gene ID= novel_gene_chr1_6374 TPM= 5.79 Transcript Type= NA
chr1	145745461	145745809	145745461	145745809	-	transcript6377.chr1.nnic@NA	transcript6377.chr1.nnic	NA	145745461	145745809	Gene ID= novel_gene_chr1_6378 TPM= 1.93 Transcript Type= NA
chr1	145824056	145842755	145824056	145842755	+	transcript6335.chr1.nic@POLR3C	transcript6335.chr1.nic	protein_coding	145824056,145825757,145826454,145826606,145826820,145828749,145833260,145833490,145836494,145836815,145837536,145838056,145839890,145840116,145840922,145842339	145824369,145825923,145826492,145826709,145827005,145828837,145833364,145833582,145836574,145836866,145837596,145838206,145839991,145840165,145841071,145842755	Gene ID= ENSG00000186141.8 TPM= 1.93 Transcript Type= NA
chr1	145823878	145841574	145823878	145841574	+	transcript6344.chr1.nnic@POLR3C	transcript6344.chr1.nnic	protein_coding	145823878,145825757,145826454,145826820,145828749,145833260,145833490,145838056,145839890,145840116,145840922	145824369,145825923,145826709,145827005,145828837,145833364,145833582,145838206,145839991,145840165,145841574	Gene ID= ENSG00000186141.8 TPM= 2.9 Transcript Type= NA
chr1	145824229	145842505	145824229	145842505	+	ENST00000334163.3@POLR3C	ENST00000334163.3	protein_coding	145824229,145825757,145826454,145826820,145828749,145833260,145833490,145836494,145836815,145837536,145838056,145839890,145840116,145840922,145842339	145824369,145825923,145826709,145827005,145828837,145833364,145833582,145836574,145836866,145837596,145838206,145839991,145840165,145841071,145842505	Gene ID= ENSG00000186141.8 TPM= 7.72 Transcript Type= protein_coding
chr1	145848522	145859080	145848522	145859080	-	ENST00000393045.6@PIAS3	ENST00000393045.6	protein_coding	145858967,145856589,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851020,145850771,145850453,145850232,145848522	145859080,145857006,145856431,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712	Gene ID= ENSG00000131788.15 TPM= 12.07 Transcript Type= protein_coding
chr1	145848522	145859817	145848522	145859817	-	transcript6380.chr1.nic@PIAS3	transcript6380.chr1.nic	protein_coding	145859665,145856589,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851020,145850771,145850453,145850232,145848522	145859817,145857006,145856431,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712	Gene ID= ENSG00000131788.15 TPM= 20.75 Transcript Type= NA
chr1	145866560	145872805	145866560	145872805	-	transcript6387.chr1.nic@ANKRD35	transcript6387.chr1.nic	protein_coding	145871982,145868311,145867991,145867287,145866560	145872805,145868400,145868056,145867392,145866765	Gene ID= ENSG00000198483.12 TPM= 40.54 Transcript Type= NA
chr1	145906098	145908070	145906098	145908070	-	transcript6402.chr1.nnic@NA	transcript6402.chr1.nnic	NA	145906098	145908070	Gene ID= novel_gene_chr1_6403 TPM= 1.93 Transcript Type= NA
chr1	145911349	145914865	145911349	145914865	-	transcript6404.chr1.nnic@NA	transcript6404.chr1.nnic	NA	145911349	145914865	Gene ID= novel_gene_chr1_6405 TPM= 1.93 Transcript Type= NA
chr1	145911350	145918837	145911350	145918837	-	ENST00000369306.7@PEX11B	ENST00000369306.7	protein_coding	145918633,145917701,145916817,145911350	145918837,145917816,145917018,145912566	Gene ID= ENSG00000131779.10 TPM= 58.88 Transcript Type= protein_coding
chr1	145921556	145927536	145921556	145927536	-	ENST00000583313.6@RBM8A	ENST00000583313.6	protein_coding	145927360,145927018,145926809,145926482,145926041,145921556	145927536,145927077,145926886,145926618,145926177,145925927	Gene ID= ENSG00000265241.6 TPM= 41.51 Transcript Type= protein_coding
chr1	145925723	145927500	145925723	145927500	-	transcript6400.chr1.nic@RBM8A	transcript6400.chr1.nic	protein_coding	145927360,145926482,145926041,145925723	145927500,145927077,145926177,145925927	Gene ID= ENSG00000265241.6 TPM= 13.51 Transcript Type= NA
chr1	145957012	145978848	145957012	145978848	+	transcript6407.chr1.nnic@AC243547.3	transcript6407.chr1.nnic	protein_coding	145957012,145958361,145959007,145974825,145974926,145975307,145977084,145977483,145977778,145977983,145978361	145957156,145958438,145959104,145974884,145974991,145975436,145977152,145977539,145977851,145978096,145978848	Gene ID= ENSG00000280778.1 TPM= 2.12 Transcript Type= NA
chr1	145933423	145958001	145933423	145958001	-	ENST00000604000.3@LIX1L	ENST00000604000.3	protein_coding	145957636,145947619,145942713,145937604,145936908,145933423	145958001,145947782,145942853,145937699,145936985,145936552	Gene ID= ENSG00000271601.3 TPM= 22.2 Transcript Type= protein_coding
chr1	145957009	145978848	145957009	145978848	+	transcript6410.chr1.nnic@POLR3GL	transcript6410.chr1.nnic	protein_coding	145957009,145959007,145974825,145975307,145977084,145977483,145977778,145977983,145978361	145957156,145959104,145974991,145975436,145977152,145977539,145977851,145978096,145978848	Gene ID= ENSG00000121851.12 TPM= 2.12 Transcript Type= NA
chr1	145957030	145978848	145957030	145978848	+	transcript6414.chr1.nnic@POLR3GL	transcript6414.chr1.nnic	protein_coding	145957030,145974825,145975307,145977084,145977483,145977778,145977983,145978361	145957156,145974991,145975436,145977152,145977539,145977851,145978096,145978848	Gene ID= ENSG00000121851.12 TPM= 2.12 Transcript Type= NA
chr1	145960605	145978848	145960605	145978848	+	transcript6416.chr1.nnic@POLR3GL	transcript6416.chr1.nnic	protein_coding	145960605,145974825,145975307,145977084,145977483,145977778,145977983,145978361	145960705,145974991,145975436,145977152,145977539,145977851,145978096,145978848	Gene ID= ENSG00000121851.12 TPM= 3.09 Transcript Type= NA
chr1	145964703	145978848	145964703	145978848	+	ENST00000369314.1@POLR3GL	ENST00000369314.1	protein_coding	145964703,145974825,145975307,145977084,145977483,145977778,145977983,145978361	145964768,145974991,145975436,145977152,145977539,145977851,145978096,145978848	Gene ID= ENSG00000121851.12 TPM= 47.49 Transcript Type= protein_coding
chr1	145992435	145996600	145992435	145996600	-	ENST00000582401.5@TXNIP	ENST00000582401.5	protein_coding	145996017,145995404,145995144,145994929,145994544,145994281,145994016,145992435	145996600,145995476,145995291,145995031,145994800,145994437,145994167,145993886	Gene ID= ENSG00000265972.5 TPM= 1397.29 Transcript Type= protein_coding
chr1	146017468	146021798	146017468	146021798	-	transcript6463.chr1.nic@HFE2	transcript6463.chr1.nic	protein_coding	146021587,146020135,146019698,146017468	146021798,146020338,146019734,146018700	Gene ID= ENSG00000168509.19 TPM= 9.94 Transcript Type= NA
chr1	146017468	146021841	146017468	146021841	-	ENST00000336751.10@HFE2	ENST00000336751.10	protein_coding	146021587,146020135,146019175,146017468	146021841,146020320,146019734,146018700	Gene ID= ENSG00000168509.19 TPM= 100.39 Transcript Type= protein_coding
chr1	146017470	146021918	146017470	146021918	-	ENST00000357836.5@HFE2	ENST00000357836.5	protein_coding	146021587,146019175,146017470	146021918,146019734,146018700	Gene ID= ENSG00000168509.19 TPM= 180.83 Transcript Type= protein_coding
chr1	146017468	146021734	146017468	146021734	-	ENST00000475797.1@HFE2	ENST00000475797.1	protein_coding	146021587,146017468	146021734,146018700	Gene ID= ENSG00000168509.19 TPM= 40.83 Transcript Type= protein_coding
chr1	146017468	146021735	146017468	146021735	-	ENST00000497365.5@HFE2	ENST00000497365.5	protein_coding	146021587,146019698,146017468	146021735,146019734,146018700	Gene ID= ENSG00000168509.19 TPM= 46.62 Transcript Type= protein_coding
chr1	147155106	147172544	147155106	147172544	-	ENST00000254101.3@PRKAB2	ENST00000254101.3	protein_coding	147172429,147171989,147167767,147166846,147166498,147162440,147161712,147155106	147172544,147172167,147167933,147166939,147166618,147162573,147161780,147159642	Gene ID= ENSG00000131791.7 TPM= 23.49 Transcript Type= protein_coding
chr1	147155891	147172193	147155891	147172193	-	transcript6504.chr1.nic@PRKAB2	transcript6504.chr1.nic	protein_coding	147171989,147167767,147166846,147166498,147162440,147161712,147155891	147172193,147167933,147166939,147166618,147162573,147161780,147159642	Gene ID= ENSG00000131791.7 TPM= 4.18 Transcript Type= NA
chr1	147241695	147243344	147241695	147243344	-	transcript6537.chr1.nnic@NA	transcript6537.chr1.nnic	NA	147241695	147243344	Gene ID= novel_gene_chr1_6538 TPM= 4.83 Transcript Type= NA
chr1	147242677	147295762	147242677	147295762	+	transcript6513.chr1.nnic@CHD1L	transcript6513.chr1.nnic	protein_coding	147242677,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147268782,147270932,147272171,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147268878,147271005,147272281,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 4.83 Transcript Type= NA
chr1	147242633	147295762	147242633	147295762	+	transcript6515.chr1.nnic@CHD1L	transcript6515.chr1.nnic	protein_coding	147242633,147252623,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147272171,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147252735,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147272281,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 4.1 Transcript Type= NA
chr1	147242633	147295762	147242633	147295762	+	transcript6517.chr1.nnic@CHD1L	transcript6517.chr1.nnic	protein_coding	147242633,147252623,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147252735,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 12.79 Transcript Type= NA
chr1	147242633	147295762	147242633	147295762	+	transcript6519.chr1.nnic@CHD1L	transcript6519.chr1.nnic	protein_coding	147242633,147252623,147254870,147255813,147256531,147259837,147265932,147267426,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147252735,147254976,147255927,147256562,147259918,147266087,147267518,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 2.17 Transcript Type= NA
chr1	147242677	147295762	147242677	147295762	+	transcript6520.chr1.nnic@CHD1L	transcript6520.chr1.nnic	protein_coding	147242677,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 1.93 Transcript Type= NA
chr1	147242633	147295762	147242633	147295762	+	transcript6524.chr1.nnic@CHD1L	transcript6524.chr1.nnic	protein_coding	147242633,147252623,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147275354,147276104,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147252735,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147275468,147276257,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 2.17 Transcript Type= NA
chr1	147242681	147295762	147242681	147295762	+	transcript6533.chr1.nnic@CHD1L	transcript6533.chr1.nnic	protein_coding	147242681,147265932,147267426,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147266087,147267518,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 1.93 Transcript Type= NA
chr1	147242681	147295762	147242681	147295762	+	transcript6535.chr1.nnic@CHD1L	transcript6535.chr1.nnic	protein_coding	147242681,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 1.93 Transcript Type= NA
chr1	147242681	147295762	147242681	147295762	+	transcript6536.chr1.nnic@CHD1L	transcript6536.chr1.nnic	protein_coding	147242681,147275354,147276104,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147275468,147276257,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 1.93 Transcript Type= NA
chr1	147242684	147295762	147242684	147295762	+	ENST00000369258.8@CHD1L	ENST00000369258.8	protein_coding	147242684,147252623,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147268782,147270932,147272171,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147252735,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147268878,147271005,147272281,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 12.55 Transcript Type= protein_coding
chr1	147647368	147670454	147647368	147670454	-	transcript6541.chr1.nic@ACP6	transcript6541.chr1.nic	protein_coding	147669830,147659396,147658960,147655161,147654194,147652449,147650143,147648246,147647368	147670454,147659526,147659039,147655248,147654326,147652549,147650238,147648411,147647566	Gene ID= ENSG00000162836.11 TPM= 1.93 Transcript Type= NA
chr1	147756200	147773362	147756200	147773362	-	ENST00000621517.1@GJA5	ENST00000621517.1	protein_coding	147773252,147756200	147773362,147759271	Gene ID= ENSG00000265107.2 TPM= 2.9 Transcript Type= protein_coding
chr1	147928387	147993339	147928387	147993339	+	transcript6547.chr1.nnic@GPR89B	transcript6547.chr1.nnic	protein_coding	147928387,147936627,147938714,147943438,147943997,147953345,147954322,147966554,147969867,147986199,147988432,147992502,147992711	147928578,147936686,147938817,147943544,147944098,147953465,147954402,147966752,147969959,147986294,147988521,147992567,147993339	Gene ID= ENSG00000188092.14 TPM= 2.41 Transcript Type= NA
chr1	147928393	147993339	147928393	147993339	+	ENST00000314163.11@GPR89B	ENST00000314163.11	protein_coding	147928393,147936627,147938714,147943438,147943997,147953345,147954322,147966554,147968875,147969867,147986199,147988432,147992502,147992711	147928578,147936686,147938817,147943544,147944098,147953465,147954402,147966663,147968963,147969959,147986294,147988521,147992567,147993339	Gene ID= ENSG00000188092.14 TPM= 8.21 Transcript Type= protein_coding
chr1	148149713	148149800	148149713	148149800	+	transcript6549.chr1.nnic@NA	transcript6549.chr1.nnic	NA	148149713	148149800	Gene ID= novel_gene_chr1_6550 TPM= 1.93 Transcript Type= NA
chr1	148594248	148679757	148594248	148679757	-	transcript6556.chr1.nnic@NBPF14	transcript6556.chr1.nnic	protein_coding	148679462,148640016,148615691,148607410,148598613,148594248	148679757,148640089,148615950,148607745,148598695,148595752	Gene ID= ENSG00000270629.5 TPM= 1.93 Transcript Type= NA
chr1	148889496	149033016	148889496	149033016	+	transcript6558.chr1.nnic@PDE4DIP	transcript6558.chr1.nnic	protein_coding	148889496,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148998143,149001591,149002850,149003611,149004909,149007201,149008444,149009568,149010443,149012591,149016299,149017748,149018542,149020147,149021029,149024445,149026715,149027401,149028560,149029787,149030232,149031173,149031944	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148998375,149001696,149003042,149003730,149005437,149007436,149008495,149009791,149010595,149012776,149016550,149017879,149018661,149020336,149021153,149024684,149026831,149027627,149028703,149029925,149030278,149031224,149033016	Gene ID= ENSG00000178104.19 TPM= 26.93 Transcript Type= NA
chr1	148889496	149033016	148889496	149033016	+	transcript6560.chr1.nnic@PDE4DIP	transcript6560.chr1.nnic	protein_coding	148889496,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148998143,149001591,149002850,149003611,149004909,149007201,149008444,149009568,149010443,149012591,149016299,149017748,149018542,149020147,149021029,149024445,149026715,149027401,149028560,149029787,149030232,149031173,149032000	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148998375,149002026,149003042,149003730,149005437,149007436,149008495,149009791,149010595,149012776,149016550,149017879,149018661,149020336,149021153,149024684,149026831,149027627,149028703,149029925,149030278,149031224,149033016	Gene ID= ENSG00000178104.19 TPM= 29.1 Transcript Type= NA
chr1	148889496	149033016	148889496	149033016	+	transcript6562.chr1.nic@PDE4DIP	transcript6562.chr1.nic	protein_coding	148889496,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148998143,149001591,149002850,149003611,149004909,149007201,149008444,149009568,149010443,149012591,149016299,149017748,149018542,149020147,149021029,149024445,149026715,149027401,149028560,149029787,149030232,149032000	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148998375,149001696,149003042,149003730,149005437,149007436,149008495,149009791,149010595,149012776,149016550,149017879,149018661,149020336,149021153,149024684,149026831,149027627,149028703,149029925,149030278,149033016	Gene ID= ENSG00000178104.19 TPM= 131.43 Transcript Type= NA
chr1	148889463	149033016	148889463	149033016	+	ENST00000369356.8@PDE4DIP	ENST00000369356.8	protein_coding	148889463,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148998143,149001591,149002850,149003611,149004909,149007201,149008444,149009568,149010443,149012591,149016299,149017748,149018542,149020147,149021029,149024445,149026715,149027401,149028560,149029787,149030232,149032000	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148998375,149002026,149003042,149003730,149005437,149007436,149008495,149009791,149010595,149012776,149016550,149017879,149018661,149020336,149021153,149024684,149026831,149027627,149028703,149029925,149030278,149033016	Gene ID= ENSG00000178104.19 TPM= 146.39 Transcript Type= protein_coding
chr1	148844395	148981746	148844395	148981746	+	transcript6583.chr1.nic@PDE4DIP	transcript6583.chr1.nic	protein_coding	148844395,148863250,148868471,148889784,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270	148844794,148863305,148868622,148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981746	Gene ID= ENSG00000178104.19 TPM= 16.64 Transcript Type= NA
chr1	148889496	148981746	148889496	148981746	+	transcript6594.chr1.nic@PDE4DIP	transcript6594.chr1.nic	protein_coding	148889496,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981746	Gene ID= ENSG00000178104.19 TPM= 76.62 Transcript Type= NA
chr1	148844382	149033019	148844382	149033019	+	ENST00000618462.4@PDE4DIP	ENST00000618462.4	protein_coding	148844382,148863250,148868471,148889784,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148998143,149001591,149002850,149003611,149004909,149007201,149008444,149009568,149010443,149016299,149017748,149018542,149020147,149021029,149024445,149026715,149027401,149028560,149029787,149030232,149031944	148844794,148863305,148868622,148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148998375,149001696,149003042,149003730,149005437,149007436,149008495,149009791,149010595,149016550,149017879,149018661,149020336,149021153,149024684,149026831,149027627,149028703,149029925,149030278,149033019	Gene ID= ENSG00000178104.19 TPM= 29.21 Transcript Type= protein_coding
chr1	148952341	148986477	148952341	148986477	+	ENST00000529945.2@PDE4DIP	ENST00000529945.2	protein_coding	148952341,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270	148953905,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148986477	Gene ID= ENSG00000178104.19 TPM= 4.1 Transcript Type= protein_coding
chr1	148889576	148932729	148889576	148932729	+	ENST00000369347.8@PDE4DIP	ENST00000369347.8	protein_coding	148889576,148929197,148931800,148932113	148889894,148929273,148931923,148932729	Gene ID= ENSG00000178104.19 TPM= 200.97 Transcript Type= protein_coding
chr1	148889609	148993882	148889609	148993882	+	ENST00000369349.7@PDE4DIP	ENST00000369349.7	protein_coding	148889609,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148992255	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148993882	Gene ID= ENSG00000178104.19 TPM= 75.44 Transcript Type= protein_coding
chr1	148889564	149033016	148889564	149033016	+	ENST00000369354.7@PDE4DIP	ENST00000369354.7	protein_coding	148889564,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885,148998143,149001591,149002850,149003611,149004909,149007201,149008444,149009568,149010443,149012591,149016299,149017748,149018542,149020147,149021029,149024445,149026715,149027401,149028560,149029787,149030232,149031944	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148991973,148998375,149002026,149003042,149003730,149005437,149007436,149008495,149009791,149010595,149012776,149016550,149017879,149018661,149020336,149021153,149024684,149026831,149027627,149028703,149029925,149030278,149033016	Gene ID= ENSG00000178104.19 TPM= 56.06 Transcript Type= protein_coding
chr1	148889645	148993882	148889645	148993882	+	ENST00000369351.7@PDE4DIP	ENST00000369351.7	protein_coding	148889645,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270,148991885	148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981397,148993882	Gene ID= ENSG00000178104.19 TPM= 6.42 Transcript Type= protein_coding
chr1	149190286	149285827	149190286	149285827	-	transcript6641.chr1.nnic@AC245297.1	transcript6641.chr1.nnic	unprocessed_pseudogene	149285454,149266969,149261640,149240377,149201014,149198361,149197996,149190286	149285827,149267024,149261791,149240487,149201090,149198484,149198171,149190531	Gene ID= ENSG00000215861.5 TPM= 7.05 Transcript Type= NA
chr1	149168224	149240764	149168224	149240764	-	transcript6652.chr1.nnic@AC245297.1	transcript6652.chr1.nnic	unprocessed_pseudogene	149240377,149201014,149198361,149197996,149168224	149240764,149201090,149198484,149198171,149169572	Gene ID= ENSG00000215861.5 TPM= 7.79 Transcript Type= NA
chr1	149197200	149240711	149197200	149240711	-	transcript6673.chr1.nic@AC245297.1	transcript6673.chr1.nic	unprocessed_pseudogene	149240377,149201014,149198361,149197200	149240711,149201090,149198484,149198171	Gene ID= ENSG00000215861.5 TPM= 16.72 Transcript Type= NA
chr1	149884459	149886652	149884459	149886652	-	ENST00000369155.3@HIST2H2BE	ENST00000369155.3	protein_coding	149884459	149886652	Gene ID= ENSG00000184678.10 TPM= 27.03 Transcript Type= protein_coding
chr1	149886918	149887333	149886918	149887333	+	transcript6690.chr1.nnic@NA	transcript6690.chr1.nnic	NA	149886918	149887333	Gene ID= novel_gene_chr1_6691 TPM= 2.9 Transcript Type= NA
chr1	149899574	149900790	149899574	149900790	+	transcript6693.chr1.nic@BOLA1	transcript6693.chr1.nic	protein_coding	149899574,149899843	149899672,149900790	Gene ID= ENSG00000178096.8 TPM= 3.86 Transcript Type= NA
chr1	149899597	149900792	149899597	149900792	+	ENST00000369152.5@BOLA1	ENST00000369152.5	protein_coding	149899597,149900010	149899672,149900792	Gene ID= ENSG00000178096.8 TPM= 25.1 Transcript Type= protein_coding
chr1	149923317	149928344	149923317	149928344	-	ENST00000271628.8@SF3B4	ENST00000271628.8	protein_coding	149927726,149927166,149926376,149925836,149923841,149923317	149928344,149927294,149926918,149926042,149924014,149923729	Gene ID= ENSG00000143368.9 TPM= 30.89 Transcript Type= protein_coding
chr1	149928652	149936867	149928652	149936867	-	ENST00000439741.3@MTMR11	ENST00000439741.3	protein_coding	149936582,149936154,149935584,149935299,149934986,149934448,149934191,149933855,149933610,149933406,149932264,149931944,149931260,149930792,149930365,149929623,149928652	149936867,149936229,149935705,149935359,149935128,149934526,149934326,149933942,149933698,149933530,149932330,149932014,149931426,149930965,149930547,149929916,149929317	Gene ID= ENSG00000014914.20 TPM= 1.93 Transcript Type= protein_coding
chr1	149958323	150010751	149958323	150010751	-	transcript6700.chr1.nic@OTUD7B	transcript6700.chr1.nic	protein_coding	150010448,149977426,149971063,149967294,149965777,149964222,149958323	150010751,149977576,149971251,149967521,149965878,149964349,149959796	Gene ID= ENSG00000264522.5 TPM= 5.79 Transcript Type= NA
chr1	149941174	149944569	149941174	149944569	-	transcript6701.chr1.nnic@NA	transcript6701.chr1.nnic	NA	149941174	149944569	Gene ID= novel_gene_chr1_6702 TPM= 3.86 Transcript Type= NA
chr1	150067312	150145327	150067312	150145327	+	ENST00000369130.7@VPS45	ENST00000369130.7	protein_coding	150067312,150068630,150072166,150076233,150076916,150077094,150077669,150081342,150081884,150082716,150091937,150092302,150093527,150110496,150144709	150067950,150068764,150072226,150076312,150076984,150077231,150077779,150081476,150081997,150082883,150092095,150092409,150093648,150110627,150145327	Gene ID= ENSG00000136631.12 TPM= 22.68 Transcript Type= protein_coding
chr1	150067795	150145326	150067795	150145326	+	transcript6711.chr1.nic@VPS45	transcript6711.chr1.nic	protein_coding	150067795,150068630,150072166,150076233,150081342,150081884,150082716,150091937,150092302,150093527,150110496,150144709	150067950,150068764,150072226,150077779,150081476,150081997,150082883,150092095,150092409,150093648,150110627,150145326	Gene ID= ENSG00000136631.12 TPM= 4.34 Transcript Type= NA
chr1	150149646	150159628	150149646	150159628	+	transcript6713.chr1.nic@PLEKHO1	transcript6713.chr1.nic	protein_coding	150149646,150150912,150156066,150156911,150157385,150158819	150149786,150151058,150156206,150157015,150157486,150159628	Gene ID= ENSG00000023902.13 TPM= 7.72 Transcript Type= NA
chr1	150218417	150236156	150218417	150236156	-	ENST00000583931.5@ANP32E	ENST00000583931.5	protein_coding	150235733,150231777,150230571,150229072,150226608,150223186,150218417	150236156,150231926,150230693,150229237,150226795,150223240,150220761	Gene ID= ENSG00000143401.14 TPM= 23.65 Transcript Type= protein_coding
chr1	150218555	150236113	150218555	150236113	-	transcript6724.chr1.nic@ANP32E	transcript6724.chr1.nic	protein_coding	150235733,150230571,150229072,150226608,150223186,150218555	150236113,150230693,150229237,150226795,150223240,150220761	Gene ID= ENSG00000143401.14 TPM= 7.24 Transcript Type= NA
chr1	150265406	150269303	150265406	150269303	-	ENST00000360244.8@APH1A	ENST00000360244.8	protein_coding	150268698,150267957,150267716,150267356,150267075,150265406	150269303,150268127,150267789,150267478,150267202,150266656	Gene ID= ENSG00000117362.12 TPM= 12.71 Transcript Type= protein_coding
chr1	150265406	150269018	150265406	150269018	-	transcript6735.chr1.nnic@APH1A	transcript6735.chr1.nnic	protein_coding	150268698,150267957,150267716,150267075,150265406	150269018,150268127,150267789,150267202,150266656	Gene ID= ENSG00000117362.12 TPM= 3.54 Transcript Type= NA
chr1	150265404	150268999	150265404	150268999	-	ENST00000369109.7@APH1A	ENST00000369109.7	protein_coding	150268698,150267957,150267716,150267356,150267075,150266533,150265404	150268999,150268127,150267789,150267478,150267202,150266656,150266194	Gene ID= ENSG00000117362.12 TPM= 8.85 Transcript Type= protein_coding
chr1	150268200	150280916	150268200	150280916	+	ENST00000369102.5@C1orf54	ENST00000369102.5	protein_coding	150268200,150272284,150272799,150274087,150275741,150276522,150279643,150280835	150268820,150272413,150272863,150274170,150275799,150276632,150279741,150280916	Gene ID= ENSG00000118292.8 TPM= 1.93 Transcript Type= protein_coding
chr1	150282543	150287093	150282543	150287093	+	ENST00000369095.5@CIART	ENST00000369095.5	protein_coding	150282543,150283208,150283805,150284426,150284597,150286430	150282618,150283633,150283880,150284504,150284708,150287093	Gene ID= ENSG00000159208.15 TPM= 6.27 Transcript Type= protein_coding
chr1	150282543	150287093	150282543	150287093	+	ENST00000369094.5@CIART	ENST00000369094.5	protein_coding	150282543,150283462,150283805,150284426,150284597,150286430	150282618,150283633,150283880,150284504,150284708,150287093	Gene ID= ENSG00000159208.15 TPM= 3.38 Transcript Type= protein_coding
chr1	150293720	150308979	150293720	150308979	+	ENST00000614145.4@MRPS21	ENST00000614145.4	protein_coding	150293720,150294335,150308048	150293898,150294449,150308979	Gene ID= ENSG00000266472.5 TPM= 41.99 Transcript Type= protein_coding
chr1	150293920	150308979	150293920	150308979	+	ENST00000581066.2@MRPS21	ENST00000581066.2	protein_coding	150293920,150308048	150294449,150308979	Gene ID= ENSG00000266472.5 TPM= 3.38 Transcript Type= protein_coding
chr1	150321476	150353195	150321476	150353195	+	ENST00000324862.6@PRPF3	ENST00000324862.6	protein_coding	150321476,150324895,150325751,150328320,150332684,150332979,150334935,150338160,150340398,150343309,150344162,150344434,150346018,150346408,150349157,150352833	150321592,150325087,150325881,150328466,150332767,150333199,150335241,150338326,150340477,150343452,150344261,150344547,150346136,150346491,150349218,150353195	Gene ID= ENSG00000117360.12 TPM= 26.06 Transcript Type= protein_coding
chr1	150471641	150473710	150471641	150473710	+	transcript6758.chr1.nnic@NA	transcript6758.chr1.nnic	NA	150471641	150473710	Gene ID= novel_gene_chr1_6759 TPM= 5.79 Transcript Type= NA
chr1	150473631	150474358	150473631	150474358	+	transcript6760.chr1.nnic@NA	transcript6760.chr1.nnic	NA	150473631	150474358	Gene ID= novel_gene_chr1_6761 TPM= 1.93 Transcript Type= NA
chr1	150487401	150507598	150487401	150507598	+	transcript6764.chr1.nnic@TARS2	transcript6764.chr1.nnic	protein_coding	150487401,150487858,150488964,150490601,150491394,150491598,150492411,150496810,150497530,150498502,150498897,150499216,150504335,150504632,150504906,150505591,150506916	150487516,150488054,150489087,150490725,150491511,150491662,150492489,150496908,150497747,150498664,150499034,150499293,150504435,150504733,150504978,150505705,150507598	Gene ID= ENSG00000143374.16 TPM= 3.62 Transcript Type= NA
chr1	150487401	150507598	150487401	150507598	+	transcript6766.chr1.nnic@TARS2	transcript6766.chr1.nnic	protein_coding	150487401,150487858,150488964,150490601,150491394,150491598,150492411,150496810,150497530,150498502,150498897,150499216,150504335,150504906,150505591,150506916	150487516,150488054,150489087,150490725,150491511,150491662,150492489,150496908,150497747,150498664,150499034,150499293,150504435,150504978,150505705,150507598	Gene ID= ENSG00000143374.16 TPM= 3.62 Transcript Type= NA
chr1	150487401	150507598	150487401	150507598	+	transcript6770.chr1.nic@TARS2	transcript6770.chr1.nic	protein_coding	150487401,150487858,150488964,150490601,150491394,150491598,150492411,150497530,150498502,150498897,150499216,150504335,150504906,150505591,150506916	150487516,150488054,150489087,150490725,150491511,150491662,150492489,150497747,150498664,150499034,150499293,150504435,150504978,150505705,150507598	Gene ID= ENSG00000143374.16 TPM= 18.1 Transcript Type= NA
chr1	150487417	150507602	150487417	150507602	+	ENST00000369064.7@TARS2	ENST00000369064.7	protein_coding	150487417,150487858,150488964,150490601,150491394,150491598,150492411,150496482,150496810,150497530,150498502,150498897,150499216,150504335,150504632,150504906,150505591,150506916	150487516,150488054,150489087,150490725,150491511,150491662,150492489,150496628,150496908,150497747,150498664,150499034,150499293,150504435,150504733,150504978,150505705,150507602	Gene ID= ENSG00000143374.16 TPM= 5.55 Transcript Type= protein_coding
chr1	150549363	150551906	150549363	150551906	+	transcript6775.chr1.nic@ADAMTSL4	transcript6775.chr1.nic	protein_coding	150549363,150550615	150550276,150551906	Gene ID= ENSG00000143382.14 TPM= 1.93 Transcript Type= NA
chr1	150574556	150579590	150574556	150579590	-	ENST00000369026.2@MCL1	ENST00000369026.2	protein_coding	150578843,150578244,150574556	150579590,150578491,150577491	Gene ID= ENSG00000143384.12 TPM= 194.03 Transcript Type= protein_coding
chr1	150623281	150629577	150623281	150629577	-	ENST00000271690.12@ENSA	ENST00000271690.12	protein_coding	150629414,150627467,150623281	150629577,150627592,150625808	Gene ID= ENSG00000143420.18 TPM= 11.58 Transcript Type= protein_coding
chr1	150623622	150629577	150623622	150629577	-	ENST00000356527.9@ENSA	ENST00000356527.9	protein_coding	150629414,150627398,150623622	150629577,150627592,150625808	Gene ID= ENSG00000143420.18 TPM= 30.89 Transcript Type= protein_coding
chr1	150627054	150629577	150627054	150629577	-	ENST00000362052.7@ENSA	ENST00000362052.7	protein_coding	150629414,150627054	150629577,150627592	Gene ID= ENSG00000143420.18 TPM= 1.93 Transcript Type= protein_coding
chr1	150646225	150697024	150646225	150697024	-	ENST00000271732.7@GOLPH3L	ENST00000271732.7	protein_coding	150696992,150694656,150663632,150661814,150646225	150697024,150694850,150663763,150661928,150648748	Gene ID= ENSG00000143457.10 TPM= 1.93 Transcript Type= protein_coding
chr1	150796208	150808323	150796208	150808323	-	ENST00000271651.7@CTSK	ENST00000271651.7	protein_coding	150808214,150806686,150806102,150805861,150804021,150799544,150799168,150796208	150808323,150806806,150806224,150806016,150804239,150799709,150799273,150796898	Gene ID= ENSG00000143387.12 TPM= 1.93 Transcript Type= protein_coding
chr1	150811681	150876708	150811681	150876708	-	ENST00000515192.5@ARNT	ENST00000515192.5	protein_coding	150876543,150861247,150858349,150852762,150846263,150842424,150839441,150836280,150834538,150832334,150831818,150829904,150829093,150826543,150823194,150817920,150817361,150817082,150816788,150816259,150814077,150813172,150811681	150876708,150861302,150858460,150852806,150846307,150842468,150839654,150836493,150834640,150832399,150831903,150829965,150829227,150826617,150823345,150818030,150817433,150817202,150816890,150816406,150814239,150813338,150812110	Gene ID= ENSG00000143437.20 TPM= 1.45 Transcript Type= protein_coding
chr1	150809705	150876768	150809705	150876768	-	ENST00000358595.9@ARNT	ENST00000358595.9	protein_coding	150876543,150858349,150852762,150846263,150842424,150839441,150836280,150834538,150832334,150831818,150829904,150829093,150826543,150823194,150817920,150817361,150817082,150816788,150816259,150814077,150813172,150809705	150876768,150858460,150852806,150846307,150842468,150839654,150836493,150834640,150832399,150831903,150829980,150829227,150826617,150823345,150818030,150817433,150817202,150816890,150816406,150814239,150813338,150812110	Gene ID= ENSG00000143437.20 TPM= 9.17 Transcript Type= protein_coding
chr1	150926339	150964735	150926339	150964735	+	ENST00000271640.9@SETDB1	ENST00000271640.9	protein_coding	150926339,150927704,150929967,150939940,150941329,150942563,150942852,150943920,150944918,150946886,150949122,150949370,150950458,150951365,150959178,150960563,150962130,150962587,150962974,150963530,150963995,150964247	150926517,150927974,150930118,150939974,150941428,150942688,150943053,150943993,150945108,150947012,150949278,150949525,150951090,150951481,150959347,150961191,150962158,150962719,150963139,150963741,150964083,150964735	Gene ID= ENSG00000143379.12 TPM= 5.79 Transcript Type= protein_coding
chr1	150965173	150975004	150965173	150975004	-	ENST00000368954.9@CERS2	ENST00000368954.9	protein_coding	150974619,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965173	150975004,150969091,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288	Gene ID= ENSG00000143418.19 TPM= 18.66 Transcript Type= protein_coding
chr1	150965173	150975003	150965173	150975003	-	ENST00000271688.10@CERS2	ENST00000271688.10	protein_coding	150974619,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965173	150975003,150969131,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288	Gene ID= ENSG00000143418.19 TPM= 4.18 Transcript Type= protein_coding
chr1	150965259	150974457	150965259	150974457	-	transcript6849.chr1.nic@CERS2	transcript6849.chr1.nic	protein_coding	150974318,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965259	150974457,150969131,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288	Gene ID= ENSG00000143418.19 TPM= 3.21 Transcript Type= NA
chr1	150996835	151006890	150996835	151006890	-	transcript6858.chr1.nnic@MINDY1	transcript6858.chr1.nnic	protein_coding	151006312,151002165,151001725,151001250,151000457,150999862,150999369,150998082,150997624,150996835	151006890,151002968,151001782,151001314,151000615,150999964,150999511,150998273,150997752,150997367	Gene ID= ENSG00000143409.15 TPM= 2.58 Transcript Type= NA
chr1	150996835	151006881	150996835	151006881	-	transcript6859.chr1.nnic@MINDY1	transcript6859.chr1.nnic	protein_coding	151006312,151002165,151001725,151001250,151000457,150999862,150999369,150998082,150997624,150996835	151006881,151002932,151001782,151001314,151000615,150999964,150999511,150998273,150997779,150997367	Gene ID= ENSG00000143409.15 TPM= 5.47 Transcript Type= NA
chr1	151008420	151035713	151008420	151035713	+	transcript6863.chr1.nnic@PRUNE1	transcript6863.chr1.nnic	protein_coding	151008420,151017812,151018467,151024611,151027233,151028786,151033806	151008671,151017904,151018669,151024795,151027327,151028944,151035713	Gene ID= ENSG00000143363.15 TPM= 5.79 Transcript Type= NA
chr1	151008477	151035713	151008477	151035713	+	ENST00000271620.7@PRUNE1	ENST00000271620.7	protein_coding	151008477,151017812,151018467,151024611,151025515,151027233,151028786,151033806	151008671,151017904,151018669,151024795,151025673,151027327,151028944,151035713	Gene ID= ENSG00000143363.15 TPM= 11.58 Transcript Type= protein_coding
chr1	151047727	151050251	151047727	151050251	+	transcript6883.chr1.nnic@NA	transcript6883.chr1.nnic	NA	151047727	151050251	Gene ID= novel_gene_chr1_6884 TPM= 5.79 Transcript Type= NA
chr1	151050973	151059649	151050973	151059649	-	ENST00000540998.5@CDC42SE1	ENST00000540998.5	protein_coding	151059479,151056651,151055677,151055016,151054231,151050973	151059649,151056786,151055993,151055126,151054321,151053327	Gene ID= ENSG00000197622.12 TPM= 1.45 Transcript Type= protein_coding
chr1	151050973	151059649	151050973	151059649	-	ENST00000357235.5@CDC42SE1	ENST00000357235.5	protein_coding	151059479,151055677,151055016,151054231,151050973	151059649,151055993,151055126,151054321,151053327	Gene ID= ENSG00000197622.12 TPM= 6.27 Transcript Type= protein_coding
chr1	151057758	151068497	151057758	151068497	+	ENST00000368921.4@MLLT11	ENST00000368921.4	protein_coding	151057758,151067219	151060553,151068497	Gene ID= ENSG00000213190.3 TPM= 2.9 Transcript Type= protein_coding
chr1	151070604	151125542	151070604	151125542	+	ENST00000368918.7@GABPB2	ENST00000368918.7	protein_coding	151070604,151088190,151090406,151093192,151097852,151103562,151107037,151117392,151117957	151070934,151088297,151090573,151093386,151098002,151103675,151107222,151117516,151125542	Gene ID= ENSG00000143458.11 TPM= 1.93 Transcript Type= protein_coding
chr1	151130075	151131610	151130075	151131610	-	ENST00000563624.1@AL592424.1	ENST00000563624.1	sense_overlapping	151130075	151131610	Gene ID= ENSG00000261168.1 TPM= 5.79 Transcript Type= sense_overlapping
chr1	151132197	151146664	151132197	151146664	-	ENST00000613223.1@SEMA6C	ENST00000613223.1	protein_coding	151146433,151144385,151142504,151139976,151139638,151139425,151138630,151138316,151137986,151137711,151136857,151136448,151135591,151132197	151146664,151144434,151142675,151140090,151139701,151139481,151138731,151138406,151138105,151137799,151137074,151136579,151135599,151132695	Gene ID= ENSG00000143434.15 TPM= 3.86 Transcript Type= protein_coding
chr1	151157019	151160253	151157019	151160253	+	transcript6900.chr1.nnic@NA	transcript6900.chr1.nnic	NA	151157019	151160253	Gene ID= novel_gene_chr1_6901 TPM= 6.76 Transcript Type= NA
chr1	151166145	151169133	151166145	151169133	+	transcript6934.chr1.nnic@SCNM1	transcript6934.chr1.nnic	protein_coding	151166145,151166471,151166934,151167121,151167326,151168194,151168986	151166203,151166541,151167022,151167218,151167414,151168338,151169133	Gene ID= ENSG00000163156.11 TPM= 2.9 Transcript Type= NA
chr1	151166079	151169138	151166079	151169138	+	ENST00000368902.1@SCNM1	ENST00000368902.1	protein_coding	151166079,151166471,151166934,151167121,151167326,151168144,151168986	151166252,151166541,151167022,151167218,151167414,151168338,151169138	Gene ID= ENSG00000163156.11 TPM= 21.24 Transcript Type= protein_coding
chr1	151169987	151176072	151169987	151176072	-	transcript6921.chr1.nic@TMOD4	transcript6921.chr1.nic	protein_coding	151175924,151174753,151174391,151173499,151172268,151171633,151170920,151170519,151169987	151176072,151174917,151174547,151173615,151172357,151171763,151171063,151170663,151170103	Gene ID= ENSG00000163157.14 TPM= 38.23 Transcript Type= NA
chr1	151169987	151176016	151169987	151176016	-	ENST00000295314.8@TMOD4	ENST00000295314.8	protein_coding	151175924,151174753,151174391,151173499,151172268,151171633,151171433,151170920,151170519,151169987	151176016,151174917,151174547,151173615,151172357,151171763,151171540,151171063,151170663,151170103	Gene ID= ENSG00000163157.14 TPM= 447.35 Transcript Type= protein_coding
chr1	151169988	151175981	151169988	151175981	-	ENST00000463543.5@TMOD4	ENST00000463543.5	protein_coding	151175952,151174753,151174391,151173499,151172268,151171633,151171433,151170920,151170519,151169988	151175981,151174917,151174531,151173615,151172357,151171763,151171540,151171059,151170663,151170103	Gene ID= ENSG00000163157.14 TPM= 6.72 Transcript Type= nonsense_mediated_decay
chr1	151176459	151190166	151176459	151190166	-	transcript6947.chr1.nnic@VPS72	transcript6947.chr1.nnic	protein_coding	151190005,151185798,151185506,151184317,151176459	151190166,151185950,151185620,151184493,151177031	Gene ID= ENSG00000163159.12 TPM= 2.9 Transcript Type= NA
chr1	151176304	151190213	151176304	151190213	-	ENST00000368892.8@VPS72	ENST00000368892.8	protein_coding	151190005,151185798,151185506,151184317,151178001,151176304	151190213,151185950,151185620,151184493,151178145,151177031	Gene ID= ENSG00000163159.12 TPM= 3.86 Transcript Type= protein_coding
chr1	151198551	151249531	151198551	151249531	+	transcript6952.chr1.nic@PIP5K1A	transcript6952.chr1.nic	protein_coding	151198551,151215962,151224245,151227320,151231671,151232248,151232551,151234197,151236558,151238182,151239130,151239955,151242123,151242438,151246920,151247863	151199081,151216000,151224279,151227400,151231801,151232365,151232703,151234496,151236763,151238265,151239178,151240039,151242269,151242567,151246965,151249531	Gene ID= ENSG00000143398.19 TPM= 4.99 Transcript Type= NA
chr1	151198552	151249504	151198552	151249504	+	ENST00000409426.5@PIP5K1A	ENST00000409426.5	protein_coding	151198552,151224245,151227320,151231671,151232248,151232551,151234197,151236558,151238182,151239130,151239955,151242123,151242438,151246920,151247863	151199081,151224279,151227400,151231801,151232365,151232703,151234496,151236763,151238265,151239178,151240039,151242269,151242567,151246965,151249504	Gene ID= ENSG00000143398.19 TPM= 3.54 Transcript Type= protein_coding
chr1	151198551	151249536	151198551	151249536	+	ENST00000349792.9@PIP5K1A	ENST00000349792.9	protein_coding	151198551,151224248,151227320,151231671,151232248,151232551,151234197,151236558,151238182,151239130,151239955,151242123,151242438,151246920,151247863	151199081,151224279,151227400,151231801,151232365,151232703,151234496,151236763,151238265,151239178,151240039,151242269,151242567,151246965,151249536	Gene ID= ENSG00000143398.19 TPM= 4.03 Transcript Type= protein_coding
chr1	151254703	151267479	151254703	151267479	+	ENST00000368884.7@PSMD4	ENST00000368884.7	protein_coding	151254703,151262161,151263914,151264832,151265166,151265394,151266004,151266308,151266520,151267173	151254808,151262301,151264028,151264918,151265234,151265609,151266112,151266439,151266587,151267479	Gene ID= ENSG00000159352.15 TPM= 561.33 Transcript Type= protein_coding
chr1	151254709	151267459	151254709	151267459	+	ENST00000368881.8@PSMD4	ENST00000368881.8	protein_coding	151254709,151262161,151263914,151264832,151265166,151265394,151266004,151266308,151266520,151267173	151254808,151262301,151264028,151264918,151265234,151265609,151266121,151266439,151266587,151267459	Gene ID= ENSG00000159352.15 TPM= 34.27 Transcript Type= protein_coding
chr1	151292132	151327665	151292132	151327665	-	transcript6979.chr1.nic@PI4KB	transcript6979.chr1.nic	protein_coding	151327271,151324745,151315573,151310211,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292132	151327665,151324917,151316509,151310255,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 9.07 Transcript Type= NA
chr1	151292132	151327665	151292132	151327665	-	transcript6987.chr1.nic@PI4KB	transcript6987.chr1.nic	protein_coding	151327271,151324745,151315573,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292132	151327665,151324917,151316509,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 8.91 Transcript Type= NA
chr1	151292132	151327669	151292132	151327669	-	transcript6988.chr1.nic@PI4KB	transcript6988.chr1.nic	protein_coding	151327271,151326172,151315573,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292132	151327669,151326373,151316509,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 10.36 Transcript Type= NA
chr1	151291797	151327715	151291797	151327715	-	ENST00000368874.8@PI4KB	ENST00000368874.8	protein_coding	151327271,151315573,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151291797	151327715,151316509,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 18.66 Transcript Type= protein_coding
chr1	151292133	151327657	151292133	151327657	-	ENST00000529142.5@PI4KB	ENST00000529142.5	protein_coding	151327271,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292133	151327657,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 4.25 Transcript Type= protein_coding
chr1	151292132	151327411	151292132	151327411	-	ENST00000368873.5@PI4KB	ENST00000368873.5	protein_coding	151327271,151315573,151310211,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292132	151327411,151316509,151310255,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 49.13 Transcript Type= protein_coding
chr1	151341960	151347357	151341960	151347357	-	ENST00000452671.6@RFX5	ENST00000452671.6	protein_coding	151347211,151346489,151346205,151345928,151345106,151344728,151344417,151344197,151343681,151343342,151341960	151347357,151346606,151346333,151345961,151345188,151344847,151344536,151344278,151343882,151343442,151343178	Gene ID= ENSG00000143390.17 TPM= 3.86 Transcript Type= protein_coding
chr1	151340640	151347251	151340640	151347251	-	ENST00000290524.8@RFX5	ENST00000290524.8	protein_coding	151347211,151346482,151346205,151345928,151345106,151344728,151344417,151344197,151343681,151343342,151340640	151347251,151346606,151346333,151345961,151345188,151344847,151344536,151344278,151343882,151343442,151343178	Gene ID= ENSG00000143390.17 TPM= 14.48 Transcript Type= protein_coding
chr1	151364305	151372703	151364305	151372703	-	ENST00000426705.6@SELENBP1	ENST00000426705.6	protein_coding	151372638,151369713,151369442,151369004,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364305	151372703,151369978,151369554,151369189,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705	Gene ID= ENSG00000143416.20 TPM= 3.86 Transcript Type= protein_coding
chr1	151364302	151372733	151364302	151372733	-	ENST00000368868.9@SELENBP1	ENST00000368868.9	protein_coding	151372638,151369713,151369442,151369004,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364302	151372733,151369769,151369554,151369189,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705	Gene ID= ENSG00000143416.20 TPM= 34.75 Transcript Type= protein_coding
chr1	151399534	151401944	151399534	151401944	+	ENST00000290541.6@PSMB4	ENST00000290541.6	protein_coding	151399534,151399981,151400442,151400764,151401239,151401542,151401817	151399727,151400187,151400588,151400845,151401355,151401630,151401944	Gene ID= ENSG00000159377.10 TPM= 94.6 Transcript Type= protein_coding
chr1	151399534	151401936	151399534	151401936	+	transcript7019.chr1.nic@PSMB4	transcript7019.chr1.nic	protein_coding	151399534,151399981,151400442,151401542,151401817	151399727,151400187,151401355,151401630,151401936	Gene ID= ENSG00000159377.10 TPM= 7.72 Transcript Type= NA
chr1	151400901	151401937	151400901	151401937	+	ENST00000466425.1@PSMB4	ENST00000466425.1	protein_coding	151400901,151401542,151401817	151401355,151401630,151401937	Gene ID= ENSG00000159377.10 TPM= 1.93 Transcript Type= retained_intron
chr1	151599621	151601734	151599621	151601734	+	transcript7024.chr1.nnic@NA	transcript7024.chr1.nnic	NA	151599621	151601734	Gene ID= novel_gene_chr1_7025 TPM= 1.93 Transcript Type= NA
chr1	151612072	151694505	151612072	151694505	+	transcript7032.chr1.nnic@SNX27	transcript7032.chr1.nnic	protein_coding	151612072,151652598,151658235,151660798,151662166,151665933,151668472,151683356,151692435,151692911,151693424,151693593	151612512,151652688,151658427,151660862,151662270,151666011,151668635,151683445,151692584,151693039,151693483,151694505	Gene ID= ENSG00000143376.12 TPM= 1.93 Transcript Type= NA
chr1	151611952	151694505	151611952	151694505	+	transcript7033.chr1.nnic@SNX27	transcript7033.chr1.nnic	protein_coding	151611952,151658235,151660798,151662166,151665933,151668472,151683356,151692435,151692911,151693424,151693593	151612381,151658427,151660862,151662270,151666011,151668635,151683445,151692584,151693039,151693483,151694505	Gene ID= ENSG00000143376.12 TPM= 2.9 Transcript Type= NA
chr1	151612010	151694505	151612010	151694505	+	transcript7034.chr1.nnic@SNX27	transcript7034.chr1.nnic	protein_coding	151612010,151658235,151660798,151662166,151665933,151668472,151683356,151692435,151692911,151693424,151694370	151612381,151658427,151660862,151662270,151666011,151668635,151683445,151692584,151693039,151693483,151694505	Gene ID= ENSG00000143376.12 TPM= 3.86 Transcript Type= NA
chr1	151612170	151694505	151612170	151694505	+	transcript7037.chr1.nnic@SNX27	transcript7037.chr1.nnic	protein_coding	151612170,151658235,151660798,151662166,151665933,151668472,151683356,151692435,151692911,151693424,151693593	151612441,151658427,151660862,151662270,151666011,151668635,151683445,151692584,151693039,151693483,151694505	Gene ID= ENSG00000143376.12 TPM= 1.93 Transcript Type= NA
chr1	151612013	151669361	151612013	151669361	+	transcript7039.chr1.nic@SNX27	transcript7039.chr1.nic	protein_coding	151612013,151638888,151658235,151660798,151662166,151665933,151668472,151669141	151612512,151639119,151658427,151660862,151662270,151666011,151668635,151669361	Gene ID= ENSG00000143376.12 TPM= 2.9 Transcript Type= NA
chr1	151759647	151763496	151759647	151763496	-	transcript7046.chr1.nnic@MRPL9	transcript7046.chr1.nnic	protein_coding	151763327,151762990,151762376,151762105,151761451,151759647	151763496,151763146,151762500,151762155,151761552,151760181	Gene ID= ENSG00000143436.10 TPM= 3.38 Transcript Type= NA
chr1	151759643	151763564	151759643	151763564	-	ENST00000368830.7@MRPL9	ENST00000368830.7	protein_coding	151763327,151762990,151762376,151762105,151761451,151760816,151759643	151763564,151763146,151762500,151762155,151761552,151760899,151760181	Gene ID= ENSG00000143436.10 TPM= 86.4 Transcript Type= protein_coding
chr1	151759647	151763496	151759647	151763496	-	ENST00000467306.5@MRPL9	ENST00000467306.5	protein_coding	151763327,151762950,151762376,151762105,151761451,151760816,151759647	151763496,151763146,151762500,151762155,151761552,151760899,151760181	Gene ID= ENSG00000143436.10 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr1	151768667	151790537	151768667	151790537	-	transcript7049.chr1.nic@TDRKH	transcript7049.chr1.nic	protein_coding	151790380,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151774413,151768667	151790537,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504,151770562	Gene ID= ENSG00000182134.15 TPM= 3.86 Transcript Type= NA
chr1	151773484	151790522	151773484	151790522	-	ENST00000368824.7@TDRKH	ENST00000368824.7	protein_coding	151790380,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151773484	151790522,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504	Gene ID= ENSG00000182134.15 TPM= 3.86 Transcript Type= protein_coding
chr1	151790842	151794402	151790842	151794402	+	ENST00000389897.3@TDRKH-AS1	ENST00000389897.3	antisense_RNA	151790842,151793815	151791245,151794402	Gene ID= ENSG00000203288.3 TPM= 1.93 Transcript Type= antisense_RNA
chr1	151800264	151806154	151800264	151806154	-	ENST00000368820.3@LINGO4	ENST00000368820.3	protein_coding	151805230,151800264	151806154,151802717	Gene ID= ENSG00000213171.2 TPM= 12.55 Transcript Type= protein_coding
chr1	151800264	151831839	151800264	151831839	-	transcript7065.chr1.nnic@RORC	transcript7065.chr1.nnic	protein_coding	151831725,151829429,151817195,151816664,151814913,151814574,151813488,151813239,151812947,151811325,151805230,151800264	151831839,151829458,151817280,151816805,151815425,151814695,151813620,151813346,151813057,151811434,151805516,151802717	Gene ID= ENSG00000143365.17 TPM= 7 Transcript Type= NA
chr1	151806071	151831839	151806071	151831839	-	transcript7072.chr1.nnic@RORC	transcript7072.chr1.nnic	protein_coding	151831725,151829429,151817195,151816664,151814913,151814574,151813488,151813275,151812947,151811325,151806071	151831839,151829458,151817280,151816805,151815425,151814695,151813620,151813346,151813057,151811434,151807633	Gene ID= ENSG00000143365.17 TPM= 16.65 Transcript Type= NA
chr1	151806957	151831872	151806957	151831872	-	ENST00000318247.6@RORC	ENST00000318247.6	protein_coding	151831725,151829429,151817195,151816664,151814913,151814574,151813488,151813239,151812947,151811325,151806957	151831872,151829458,151817280,151816805,151815425,151814695,151813620,151813346,151813057,151811434,151807633	Gene ID= ENSG00000143365.17 TPM= 23.41 Transcript Type= protein_coding
chr1	151814334	151831839	151814334	151831839	-	transcript7082.chr1.nic@RORC	transcript7082.chr1.nic	protein_coding	151831725,151829429,151817195,151816664,151814913,151814334	151831839,151829458,151817280,151816805,151815425,151814695	Gene ID= ENSG00000143365.17 TPM= 6.03 Transcript Type= NA
chr1	151826844	151828993	151826844	151828993	+	transcript7085.chr1.nnic@NA	transcript7085.chr1.nnic	NA	151826844	151828993	Gene ID= novel_gene_chr1_7086 TPM= 6.76 Transcript Type= NA
chr1	151874055	151909502	151874055	151909502	-	ENST00000471464.5@THEM4	ENST00000471464.5	protein_coding	151909360,151895008,151889983,151889214,151888273,151877001,151874055	151909502,151895194,151890214,151889373,151888383,151877125,151874928	Gene ID= ENSG00000159445.12 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr1	151982915	151994390	151982915	151994390	-	ENST00000368811.7@S100A10	ENST00000368811.7	protein_coding	151993752,151986099,151982915	151994390,151986251,151983324	Gene ID= ENSG00000197747.8 TPM= 43.44 Transcript Type= protein_coding
chr1	152032506	152037035	152032506	152037035	-	ENST00000271638.2@S100A11	ENST00000271638.2	protein_coding	152036913,152033648,152032506	152037035,152033800,152032823	Gene ID= ENSG00000163191.5 TPM= 48.27 Transcript Type= protein_coding
chr1	153357854	153361027	153357854	153361027	+	ENST00000368738.3@S100A9	ENST00000368738.3	protein_coding	153357854,153358269,153360644	153357881,153358433,153361027	Gene ID= ENSG00000163220.10 TPM= 6.76 Transcript Type= protein_coding
chr1	153390032	153391188	153390032	153391188	-	ENST00000368733.3@S100A8	ENST00000368733.3	protein_coding	153391041,153390395,153390032	153391188,153390557,153390243	Gene ID= ENSG00000143546.9 TPM= 6.76 Transcript Type= protein_coding
chr1	153534599	153536244	153534599	153536244	-	ENST00000368720.6@S100A6	ENST00000368720.6	protein_coding	153536108,153535789,153535202,153534599	153536244,153535933,153535360,153534830	Gene ID= ENSG00000197956.9 TPM= 1.61 Transcript Type= protein_coding
chr1	153534599	153536215	153534599	153536215	-	ENST00000496817.5@S100A6	ENST00000496817.5	protein_coding	153535949,153535202,153534599	153536215,153535375,153534830	Gene ID= ENSG00000197956.9 TPM= 3.54 Transcript Type= protein_coding
chr1	153534599	153536222	153534599	153536222	-	ENST00000368719.8@S100A6	ENST00000368719.8	protein_coding	153535949,153535202,153534599	153536222,153535360,153534830	Gene ID= ENSG00000197956.9 TPM= 101.04 Transcript Type= protein_coding
chr1	153543613	153545885	153543613	153545885	-	ENST00000368716.8@S100A4	ENST00000368716.8	protein_coding	153545753,153544654,153543613	153545885,153544809,153543923	Gene ID= ENSG00000196154.11 TPM= 22.2 Transcript Type= protein_coding
chr1	153606886	153613083	153606886	153613083	-	ENST00000368706.8@S100A16	ENST00000368706.8	protein_coding	153612952,153607999,153606886	153613083,153608177,153607692	Gene ID= ENSG00000188643.10 TPM= 30.89 Transcript Type= protein_coding
chr1	153618787	153628248	153618787	153628248	-	ENST00000476133.5@S100A13	ENST00000476133.5	protein_coding	153628121,153627483,153626320,153618787	153628248,153627598,153626533,153619038	Gene ID= ENSG00000189171.14 TPM= 7.5 Transcript Type= processed_transcript
chr1	153618804	153627048	153618804	153627048	-	ENST00000392622.3@S100A13	ENST00000392622.3	protein_coding	153626951,153626320,153618804	153627048,153626533,153619038	Gene ID= ENSG00000189171.14 TPM= 2.03 Transcript Type= protein_coding
chr1	153618804	153627634	153618804	153627634	-	transcript7169.chr1.nic@S100A13	transcript7169.chr1.nic	protein_coding	153627483,153626320,153618804	153627634,153626533,153619038	Gene ID= ENSG00000189171.14 TPM= 5.57 Transcript Type= NA
chr1	153618802	153628239	153618802	153628239	-	ENST00000440685.6@S100A13	ENST00000440685.6	protein_coding	153628121,153627483,153626320,153618802	153628239,153627598,153626533,153619038	Gene ID= ENSG00000189171.14 TPM= 31.15 Transcript Type= protein_coding
chr1	153618804	153627268	153618804	153627268	-	ENST00000392623.5@S100A13	ENST00000392623.5	protein_coding	153627139,153626320,153618804	153627268,153626533,153619038	Gene ID= ENSG00000189171.14 TPM= 4.92 Transcript Type= protein_coding
chr1	153628397	153632037	153628397	153632037	+	ENST00000292169.5@S100A1	ENST00000292169.5	protein_coding	153628397,153630509,153631698	153628496,153630662,153632037	Gene ID= ENSG00000160678.11 TPM= 184.37 Transcript Type= protein_coding
chr1	153634035	153645470	153634035	153645470	+	transcript7114.chr1.nnic@CHTOP	transcript7114.chr1.nnic	protein_coding	153634035,153636572,153638295,153639368,153642246,153643227,153645064	153634343,153636653,153638448,153639451,153642429,153643364,153645470	Gene ID= ENSG00000160679.12 TPM= 3.33 Transcript Type= NA
chr1	153633982	153646305	153633982	153646305	+	ENST00000368690.7@CHTOP	ENST00000368690.7	protein_coding	153633982,153636572,153638295,153642243,153643227,153645064	153634343,153636653,153638448,153642429,153643364,153646305	Gene ID= ENSG00000160679.12 TPM= 24.07 Transcript Type= protein_coding
chr1	153634035	153646302	153634035	153646302	+	transcript7133.chr1.nic@CHTOP	transcript7133.chr1.nic	protein_coding	153634035,153636572,153638295,153642243,153645064	153634343,153636653,153638448,153642429,153646302	Gene ID= ENSG00000160679.12 TPM= 4.87 Transcript Type= NA
chr1	153634035	153646305	153634035	153646305	+	transcript7141.chr1.nic@CHTOP	transcript7141.chr1.nic	protein_coding	153634035,153636572,153642243,153643227,153645064	153634343,153638448,153642429,153643364,153646305	Gene ID= ENSG00000160679.12 TPM= 4.18 Transcript Type= NA
chr1	153633982	153646305	153633982	153646305	+	ENST00000614256.4@CHTOP	ENST00000614256.4	protein_coding	153633982,153636572,153638295,153645064	153634343,153636653,153638448,153646305	Gene ID= ENSG00000160679.12 TPM= 6.81 Transcript Type= protein_coding
chr1	153634080	153646302	153634080	153646302	+	ENST00000403433.5@CHTOP	ENST00000403433.5	protein_coding	153634080,153636572,153638295,153642246,153645064	153634343,153636653,153638448,153642429,153646302	Gene ID= ENSG00000160679.12 TPM= 5.84 Transcript Type= protein_coding
chr1	153634049	153646306	153634049	153646306	+	ENST00000368694.7@CHTOP	ENST00000368694.7	protein_coding	153634049,153636572,153638295,153642246,153643227,153645064	153634343,153636653,153638448,153642429,153643364,153646306	Gene ID= ENSG00000160679.12 TPM= 16.34 Transcript Type= protein_coding
chr1	153634075	153645470	153634075	153645470	+	ENST00000495554.1@CHTOP	ENST00000495554.1	protein_coding	153634075,153636572,153645064	153634343,153638448,153645470	Gene ID= ENSG00000160679.12 TPM= 3.86 Transcript Type= processed_transcript
chr1	153658654	153661830	153658654	153661830	+	ENST00000368685.5@SNAPIN	ENST00000368685.5	protein_coding	153658654,153659138,153659448,153661200	153658886,153659184,153659566,153661830	Gene ID= ENSG00000143553.10 TPM= 130.32 Transcript Type= protein_coding
chr1	153658714	153661829	153658714	153661829	+	ENST00000462880.1@SNAPIN	ENST00000462880.1	protein_coding	153658714,153659448,153661200	153658886,153659566,153661829	Gene ID= ENSG00000143553.10 TPM= 4.83 Transcript Type= processed_transcript
chr1	153661788	153671028	153661788	153671028	-	ENST00000615950.4@ILF2	ENST00000615950.4	protein_coding	153670918,153670171,153669836,153668453,153668000,153667555,153665663,153665220,153664396,153664043,153663215,153663019,153662705,153661788	153671028,153670230,153669878,153668576,153668077,153667657,153665728,153665336,153664474,153664130,153663276,153663133,153662795,153662556	Gene ID= ENSG00000143621.16 TPM= 3.86 Transcript Type= protein_coding
chr1	153662036	153671048	153662036	153671048	-	ENST00000361891.8@ILF2	ENST00000361891.8	protein_coding	153670918,153670171,153669836,153668453,153668000,153667555,153665663,153665220,153664396,153664043,153663215,153663019,153662705,153662036	153671048,153670230,153669878,153668557,153668077,153667657,153665728,153665336,153664474,153664130,153663276,153663133,153662795,153662556	Gene ID= ENSG00000143621.16 TPM= 95.57 Transcript Type= protein_coding
chr1	153678637	153693992	153678637	153693992	+	ENST00000368680.3@NPR1	ENST00000368680.3	protein_coding	153678637,153680501,153681180,153681704,153682498,153683376,153683740,153684964,153685806,153686123,153686646,153687016,153687200,153687634,153688053,153688953,153689188,153689453,153689806,153690284,153693106,153693352	153679829,153680700,153681293,153681839,153682589,153683511,153683824,153685084,153685880,153686200,153686750,153687087,153687356,153687789,153688221,153689099,153689311,153689521,153689980,153690382,153693197,153693992	Gene ID= ENSG00000169418.9 TPM= 13.51 Transcript Type= protein_coding
chr1	153728067	153774808	153728067	153774808	+	ENST00000318967.6@INTS3	ENST00000318967.6	protein_coding	153728067,153740651,153741285,153746957,153747279,153748689,153751095,153752279,153754642,153757572,153759526,153760311,153760827,153761570,153762728,153763233,153763832,153764118,153764690,153764944,153767674,153768893,153769769,153770198,153770685,153771796,153772340,153772639,153772925,153773193	153728784,153740734,153741368,153747070,153747363,153748755,153751239,153752408,153754739,153757763,153759613,153760390,153760918,153761676,153762847,153763362,153763886,153764221,153764734,153765063,153767827,153768961,153769844,153770311,153770733,153771963,153772440,153772711,153773081,153774808	Gene ID= ENSG00000143624.13 TPM= 2.9 Transcript Type= protein_coding
chr1	153774354	153780157	153774354	153780157	+	ENST00000271857.6@SLC27A3	ENST00000271857.6	protein_coding	153774354,153776518,153777062,153777761,153778161,153778463,153778687,153779114,153779343,153779826	153776164,153776727,153777220,153777885,153778355,153778553,153778885,153779211,153779473,153780157	Gene ID= ENSG00000143554.13 TPM= 1.93 Transcript Type= protein_coding
chr1	153806102	153806496	153806102	153806496	-	transcript7202.chr1.nnic@NA	transcript7202.chr1.nnic	NA	153806102	153806496	Gene ID= novel_gene_chr1_7203 TPM= 8.69 Transcript Type= NA
chr1	153809769	153815110	153809769	153815110	-	transcript7205.chr1.nnic@GATAD2B	transcript7205.chr1.nnic	protein_coding	153813250,153812022,153811731,153809769	153815110,153812134,153811850,153810310	Gene ID= ENSG00000143614.9 TPM= 8.69 Transcript Type= NA
chr1	153806615	153808579	153806615	153808579	-	transcript7207.chr1.nnic@NA	transcript7207.chr1.nnic	NA	153806615	153808579	Gene ID= novel_gene_chr1_7208 TPM= 7.72 Transcript Type= NA
chr1	153929501	153946696	153929501	153946696	-	ENST00000361217.8@DENND4B	ENST00000361217.8	protein_coding	153946301,153944058,153942878,153942556,153942187,153941869,153941374,153941231,153940904,153940431,153940156,153939589,153938900,153937724,153937488,153936542,153936060,153934760,153934135,153933483,153933197,153932861,153932642,153932204,153930947,153930692,153930539,153929501	153946696,153944397,153943130,153942625,153942356,153942113,153941440,153941289,153941048,153940606,153940256,153939804,153939045,153937863,153937614,153936748,153936188,153934964,153934302,153933871,153933319,153933030,153932777,153932440,153931064,153930857,153930603,153930442	Gene ID= ENSG00000198837.9 TPM= 105.22 Transcript Type= protein_coding
chr1	153945972	153947730	153945972	153947730	+	transcript7216.chr1.nnic@NA	transcript7216.chr1.nnic	NA	153945972	153947730	Gene ID= novel_gene_chr1_7217 TPM= 1.93 Transcript Type= NA
chr1	153947675	153958625	153947675	153958625	-	ENST00000368633.1@CRTC2	ENST00000368633.1	protein_coding	153958345,153955065,153954873,153954255,153953538,153953266,153952805,153952571,153952397,153952018,153951260,153949115,153948458,153947675	153958625,153955166,153954989,153954316,153953606,153953369,153952834,153952635,153952446,153952262,153951666,153949384,153948644,153948329	Gene ID= ENSG00000160741.16 TPM= 34.75 Transcript Type= protein_coding
chr1	153959099	153963641	153959099	153963641	-	ENST00000537590.5@SLC39A1	ENST00000537590.5	protein_coding	153963495,153962529,153959099	153963641,153962747,153960754	Gene ID= ENSG00000143570.17 TPM= 2.41 Transcript Type= protein_coding
chr1	153959099	153963572	153959099	153963572	-	ENST00000356205.8@SLC39A1	ENST00000356205.8	protein_coding	153963495,153962529,153962220,153959099	153963572,153962747,153962350,153960754	Gene ID= ENSG00000143570.17 TPM= 87.36 Transcript Type= protein_coding
chr1	153967506	153974359	153967506	153974359	+	transcript7222.chr1.nic@CREB3L4	transcript7222.chr1.nic	protein_coding	153967506,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872	153967884,153968639,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974359	Gene ID= ENSG00000143578.15 TPM= 1.93 Transcript Type= NA
chr1	153974512	153977671	153974512	153977671	-	transcript7226.chr1.nic@JTB	transcript7226.chr1.nic	protein_coding	153977544,153977170,153976976,153976693,153975826,153974512	153977671,153977389,153977013,153976775,153975905,153974835	Gene ID= ENSG00000143543.14 TPM= 4.83 Transcript Type= NA
chr1	153974269	153977688	153974269	153977688	-	ENST00000271843.8@JTB	ENST00000271843.8	protein_coding	153977170,153976976,153976693,153975826,153974269	153977688,153977013,153976775,153975905,153974835	Gene ID= ENSG00000143543.14 TPM= 2.9 Transcript Type= protein_coding
chr1	153974512	153977660	153974512	153977660	-	ENST00000368589.5@JTB	ENST00000368589.5	protein_coding	153977170,153976693,153975826,153974512	153977660,153977013,153975905,153974835	Gene ID= ENSG00000143543.14 TPM= 5.79 Transcript Type= protein_coding
chr1	153981651	153986404	153981651	153986404	-	transcript7235.chr1.nnic@RAB13	transcript7235.chr1.nnic	protein_coding	153986113,153984721,153983521,153982719,153982535,153982391,153981651	153986404,153984781,153983581,153982808,153982600,153982444,153982176	Gene ID= ENSG00000143545.8 TPM= 3.38 Transcript Type= NA
chr1	153981651	153986352	153981651	153986352	-	ENST00000368575.3@RAB13	ENST00000368575.3	protein_coding	153986113,153984721,153983521,153983219,153982719,153982535,153982391,153981651	153986352,153984781,153983581,153983296,153982808,153982600,153982444,153982176	Gene ID= ENSG00000143545.8 TPM= 20.75 Transcript Type= protein_coding
chr1	153990763	153992150	153990763	153992150	+	ENST00000477151.1@RPS27	ENST00000477151.1	protein_coding	153990763,153990914,153991115,153991566,153992065	153990802,153991034,153991223,153991676,153992150	Gene ID= ENSG00000177954.11 TPM= 34.43 Transcript Type= processed_transcript
chr1	153990759	153992150	153990759	153992150	+	ENST00000368567.4@RPS27	ENST00000368567.4	protein_coding	153990759,153991115,153991566,153992065	153990802,153991223,153991676,153992150	Gene ID= ENSG00000177954.11 TPM= 778.2 Transcript Type= protein_coding
chr1	153990763	153992145	153990763	153992145	+	ENST00000493224.5@RPS27	ENST00000493224.5	protein_coding	153990763,153991115,153991566,153992065	153991034,153991223,153991676,153992145	Gene ID= ENSG00000177954.11 TPM= 37.81 Transcript Type= processed_transcript
chr1	154167465	154192211	154167465	154192211	-	ENST00000368530.6@TPM3	ENST00000368530.6	protein_coding	154191902,154191186,154176115,154173084,154172908,154171413,154170649,154170400,154169305,154167465	154192211,154191311,154176248,154173201,154172978,154171488,154170711,154170469,154169383,154167940	Gene ID= ENSG00000143549.19 TPM= 204.31 Transcript Type= protein_coding
chr1	154156364	154183205	154156364	154183205	-	ENST00000330188.13@TPM3	ENST00000330188.13	protein_coding	154182988,154176115,154173084,154172908,154171413,154170649,154170400,154156364	154183205,154176248,154173201,154172978,154171488,154170711,154170469,154157721	Gene ID= ENSG00000143549.19 TPM= 6.42 Transcript Type= protein_coding
chr1	154206720	154220600	154206720	154220600	-	transcript7310.chr1.nnic@C1orf43	transcript7310.chr1.nnic	protein_coding	154220419,154219836,154214457,154213893,154212458,154212320,154206720	154220600,154219937,154214574,154213946,154212624,154212378,154207648	Gene ID= ENSG00000143612.19 TPM= 13.44 Transcript Type= NA
chr1	154206720	154220624	154206720	154220624	-	ENST00000350592.7@C1orf43	ENST00000350592.7	protein_coding	154220342,154214457,154213893,154212458,154212320,154206720	154220624,154214574,154213946,154212624,154212378,154207648	Gene ID= ENSG00000143612.19 TPM= 21.16 Transcript Type= protein_coding
chr1	154206706	154220606	154206706	154220606	-	ENST00000368521.9@C1orf43	ENST00000368521.9	protein_coding	154220342,154219836,154214457,154213893,154212458,154212320,154206706	154220606,154219937,154214574,154213946,154212624,154212378,154207648	Gene ID= ENSG00000143612.19 TPM= 283.08 Transcript Type= protein_coding
chr1	154211734	154220533	154211734	154220533	-	ENST00000368518.5@C1orf43	ENST00000368518.5	protein_coding	154220342,154219836,154214457,154213893,154212458,154211734	154220533,154219937,154214574,154213946,154212624,154212378	Gene ID= ENSG00000143612.19 TPM= 2.9 Transcript Type= protein_coding
chr1	154220849	154270852	154220849	154270852	+	ENST00000428931.5@UBAP2L	ENST00000428931.5	protein_coding	154220849,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154270200	154220975,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154270852	Gene ID= ENSG00000143569.18 TPM= 12.79 Transcript Type= protein_coding
chr1	154220849	154263505	154220849	154263505	+	ENST00000613315.4@UBAP2L	ENST00000613315.4	protein_coding	154220849,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103	154220975,154225213,154227359,154228725,154234738,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263505	Gene ID= ENSG00000143569.18 TPM= 4.75 Transcript Type= protein_coding
chr1	154220950	154263505	154220950	154263505	+	transcript7330.chr1.nic@UBAP2L	transcript7330.chr1.nic	protein_coding	154220950,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103	154221040,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263505	Gene ID= ENSG00000143569.18 TPM= 13.92 Transcript Type= NA
chr1	154221088	154263505	154221088	154263505	+	transcript7332.chr1.nic@UBAP2L	transcript7332.chr1.nic	protein_coding	154221088,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103	154221396,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263505	Gene ID= ENSG00000143569.18 TPM= 8.13 Transcript Type= NA
chr1	154272511	154275875	154272511	154275875	+	ENST00000328703.11@HAX1	ENST00000328703.11	protein_coding	154272511,154273336,154273774,154274950,154275154,154275393,154275616	154272776,154273598,154273961,154275001,154275260,154275483,154275875	Gene ID= ENSG00000143575.14 TPM= 146.24 Transcript Type= protein_coding
chr1	154272668	154275839	154272668	154275839	+	ENST00000532105.1@HAX1	ENST00000532105.1	protein_coding	154272668,154273774,154274950,154275154,154275393,154275616	154272776,154273961,154275001,154275260,154275483,154275839	Gene ID= ENSG00000143575.14 TPM= 1.93 Transcript Type= protein_coding
chr1	154272609	154275873	154272609	154275873	+	ENST00000483970.6@HAX1	ENST00000483970.6	protein_coding	154272609,154273336,154273750,154274950,154275154,154275393,154275616	154272776,154273598,154273961,154275001,154275260,154275483,154275873	Gene ID= ENSG00000143575.14 TPM= 6.27 Transcript Type= protein_coding
chr1	154405193	154469450	154405193	154469450	+	ENST00000368485.7@IL6R	ENST00000368485.7	protein_coding	154405193,154429196,154430483,154434519,154434990,154435969,154448125,154449911,154454488,154465134	154405714,154429444,154430606,154434700,154435156,154436110,154448171,154449980,154454581,154469450	Gene ID= ENSG00000160712.12 TPM= 73.78 Transcript Type= protein_coding
chr1	154418369	154466877	154418369	154466877	+	transcript7356.chr1.nnic@IL6R	transcript7356.chr1.nnic	protein_coding	154418369,154429196,154430483,154434519,154434990,154435969,154448125,154449911,154454488,154465134	154418432,154429444,154430606,154434700,154435156,154436110,154448171,154449980,154454581,154466877	Gene ID= ENSG00000160712.12 TPM= 15.23 Transcript Type= NA
chr1	154405223	154466877	154405223	154466877	+	ENST00000344086.8@IL6R	ENST00000344086.8	protein_coding	154405223,154429196,154430483,154434519,154434990,154435969,154448125,154449911,154465134	154405714,154429444,154430606,154434700,154435156,154436110,154448171,154449980,154466877	Gene ID= ENSG00000160712.12 TPM= 8.33 Transcript Type= protein_coding
chr1	154469637	154502410	154469637	154502410	-	transcript7365.chr1.nic@SHE	transcript7365.chr1.nic	protein_coding	154501436,154499112,154489051,154486527,154485943,154469637	154502410,154499238,154489356,154486683,154486062,154470362	Gene ID= ENSG00000169291.9 TPM= 5.31 Transcript Type= NA
chr1	154548577	154558633	154548577	154558633	-	ENST00000292211.4@UBE2Q1	ENST00000292211.4	protein_coding	154558227,154555860,154555428,154554735,154553032,154552736,154552404,154552093,154551921,154551771,154551397,154550938,154548577	154558633,154555964,154555532,154554785,154553172,154552820,154552464,154552183,154551979,154551819,154551492,154551004,154550469	Gene ID= ENSG00000160714.9 TPM= 10.62 Transcript Type= protein_coding
chr1	154924734	154936991	154924734	154936991	-	ENST00000368467.3@PMVK	ENST00000368467.3	protein_coding	154936591,154932352,154929024,154926354,154924734	154936991,154932415,154929176,154926483,154925265	Gene ID= ENSG00000163344.5 TPM= 65.16 Transcript Type= protein_coding
chr1	154924734	154936745	154924734	154936745	-	transcript7411.chr1.nnic@PMVK	transcript7411.chr1.nnic	protein_coding	154936591,154932352,154926354,154924734	154936745,154932415,154926483,154925265	Gene ID= ENSG00000163344.5 TPM= 2.41 Transcript Type= NA
chr1	154944080	154956451	154944080	154956451	-	transcript7397.chr1.nnic@PBXIP1	transcript7397.chr1.nnic	protein_coding	154956278,154953671,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944080	154956451,154953757,154951921,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117	Gene ID= ENSG00000163346.16 TPM= 13.51 Transcript Type= NA
chr1	154944080	154956138	154944080	154956138	-	transcript7402.chr1.nnic@PBXIP1	transcript7402.chr1.nnic	protein_coding	154956069,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944080	154956138,154951921,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117	Gene ID= ENSG00000163346.16 TPM= 12.55 Transcript Type= NA
chr1	154944080	154956104	154944080	154956104	-	ENST00000368463.7@PBXIP1	ENST00000368463.7	protein_coding	154956069,154953671,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944080	154956104,154953757,154951921,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117	Gene ID= ENSG00000163346.16 TPM= 93.64 Transcript Type= protein_coding
chr1	154944076	154956121	154944076	154956121	-	ENST00000368465.5@PBXIP1	ENST00000368465.5	protein_coding	154956069,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944076	154956121,154951919,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117	Gene ID= ENSG00000163346.16 TPM= 16.41 Transcript Type= protein_coding
chr1	154957026	154961756	154957026	154961756	-	transcript7430.chr1.nnic@PYGO2	transcript7430.chr1.nnic	protein_coding	154961474,154960977,154957026	154961756,154961153,154959846	Gene ID= ENSG00000163348.3 TPM= 1.93 Transcript Type= NA
chr1	154957026	154961748	154957026	154961748	-	ENST00000368457.2@PYGO2	ENST00000368457.2	protein_coding	154961474,154960977,154957026	154961748,154961026,154959846	Gene ID= ENSG00000163348.3 TPM= 44.4 Transcript Type= protein_coding
chr1	154963329	154974376	154963329	154974376	-	transcript7414.chr1.nic@SHC1	transcript7414.chr1.nic	protein_coding	154974248,154973293,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154963329	154974376,154973508,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 4.96 Transcript Type= NA
chr1	154962298	154971434	154962298	154971434	-	transcript7415.chr1.nnic@SHC1	transcript7415.chr1.nnic	protein_coding	154971398,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154971434,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 5.94 Transcript Type= NA
chr1	154962298	154974409	154962298	154974409	-	transcript7418.chr1.nnic@SHC1	transcript7418.chr1.nnic	protein_coding	154974248,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154974409,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966544,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 5.38 Transcript Type= NA
chr1	154962300	154974409	154962300	154974409	-	transcript7419.chr1.nic@SHC1	transcript7419.chr1.nic	protein_coding	154974248,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965639,154962300	154974409,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 3.31 Transcript Type= NA
chr1	154962298	154970747	154962298	154970747	-	ENST00000448116.6@SHC1	ENST00000448116.6	protein_coding	154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154970747,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 10.76 Transcript Type= protein_coding
chr1	154962298	154974409	154962298	154974409	-	transcript7423.chr1.nic@SHC1	transcript7423.chr1.nic	protein_coding	154974248,154970032,154969378,154968771,154968495,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154974409,154970199,154969448,154968834,154968614,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 9 Transcript Type= NA
chr1	154962300	154970748	154962300	154970748	-	transcript7424.chr1.nic@SHC1	transcript7424.chr1.nic	protein_coding	154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965639,154962300	154970748,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 3.31 Transcript Type= NA
chr1	154962298	154974376	154962298	154974376	-	ENST00000368453.8@SHC1	ENST00000368453.8	protein_coding	154974248,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154974376,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 10.76 Transcript Type= protein_coding
chr1	154974699	154979249	154974699	154979249	+	ENST00000308987.5@CKS1B	ENST00000308987.5	protein_coding	154974699,154977987,154978725	154974804,154978114,154979249	Gene ID= ENSG00000173207.12 TPM= 3.86 Transcript Type= protein_coding
chr1	154983340	154993111	154983340	154993111	+	transcript7434.chr1.nic@FLAD1	transcript7434.chr1.nic	protein_coding	154983340,154983842,154987466,154989560,154990159,154990339,154992713,154992902	154983397,154984066,154988849,154989707,154990257,154990528,154992786,154993111	Gene ID= ENSG00000160688.18 TPM= 6.44 Transcript Type= NA
chr1	154983340	154993111	154983340	154993111	+	transcript7444.chr1.nnic@FLAD1	transcript7444.chr1.nnic	protein_coding	154983340,154983842,154992713,154992902	154983397,154984066,154992786,154993111	Gene ID= ENSG00000160688.18 TPM= 3.86 Transcript Type= NA
chr1	154983346	154989016	154983346	154989016	+	transcript7447.chr1.nic@FLAD1	transcript7447.chr1.nic	protein_coding	154983346,154988105	154984066,154989016	Gene ID= ENSG00000160688.18 TPM= 3.86 Transcript Type= NA
chr1	154983359	154993111	154983359	154993111	+	ENST00000315144.14@FLAD1	ENST00000315144.14	protein_coding	154983359,154983842,154988105,154989560,154990159,154990339,154992713,154992902	154983397,154984066,154988849,154989707,154990257,154990528,154992786,154993111	Gene ID= ENSG00000160688.18 TPM= 16.09 Transcript Type= protein_coding
chr1	154983373	154993111	154983373	154993111	+	ENST00000292180.7@FLAD1	ENST00000292180.7	protein_coding	154983373,154988105,154989560,154990159,154990339,154992713,154992902	154984066,154988849,154989707,154990257,154990528,154992786,154993111	Gene ID= ENSG00000160688.18 TPM= 5.47 Transcript Type= protein_coding
chr1	155002630	155018522	155002630	155018522	+	ENST00000417934.6@ZBTB7B	ENST00000417934.6	protein_coding	155002630,155010258,155010916,155014655,155016220	155002943,155010397,155011015,155015814,155018522	Gene ID= ENSG00000160685.13 TPM= 20.03 Transcript Type= protein_coding
chr1	155002645	155018522	155002645	155018522	+	transcript7453.chr1.nnic@ZBTB7B	transcript7453.chr1.nnic	protein_coding	155002645,155014655,155016220	155002669,155015814,155018522	Gene ID= ENSG00000160685.13 TPM= 19.06 Transcript Type= NA
chr1	155002630	155018522	155002630	155018522	+	ENST00000535420.5@ZBTB7B	ENST00000535420.5	protein_coding	155002630,155014655,155016220	155002943,155015814,155018522	Gene ID= ENSG00000160685.13 TPM= 20.51 Transcript Type= protein_coding
chr1	155002657	155018522	155002657	155018522	+	ENST00000368426.3@ZBTB7B	ENST00000368426.3	protein_coding	155002657,155002843,155014655,155016220	155002686,155002943,155015814,155018522	Gene ID= ENSG00000160685.13 TPM= 19.55 Transcript Type= protein_coding
chr1	155051266	155062775	155051266	155062775	+	transcript7467.chr1.nnic@ADAM15	transcript7467.chr1.nnic	protein_coding	155051266,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155062245,155062717	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155062276,155062775	Gene ID= ENSG00000143537.13 TPM= 2.12 Transcript Type= NA
chr1	155051286	155062758	155051286	155062758	+	ENST00000359280.8@ADAM15	ENST00000359280.8	protein_coding	155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061904,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061975,155062369,155062758	Gene ID= ENSG00000143537.13 TPM= 5.5 Transcript Type= protein_coding
chr1	155051306	155062775	155051306	155062775	+	ENST00000271836.10@ADAM15	ENST00000271836.10	protein_coding	155051306,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155062369,155062775	Gene ID= ENSG00000143537.13 TPM= 24.81 Transcript Type= protein_coding
chr1	155051286	155062758	155051286	155062758	+	ENST00000526491.5@ADAM15	ENST00000526491.5	protein_coding	155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061415,155061904,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061489,155062117,155062369,155062758	Gene ID= ENSG00000143537.13 TPM= 6.47 Transcript Type= nonsense_mediated_decay
chr1	155051286	155062758	155051286	155062758	+	ENST00000355956.6@ADAM15	ENST00000355956.6	protein_coding	155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061415,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061489,155062369,155062758	Gene ID= ENSG00000143537.13 TPM= 2.61 Transcript Type= protein_coding
chr1	155127460	155134857	155127460	155134857	+	ENST00000368407.7@EFNA1	ENST00000368407.7	protein_coding	155127460,155131339,155133503,155133730,155133955	155128069,155131634,155133568,155133780,155134857	Gene ID= ENSG00000169242.11 TPM= 44.4 Transcript Type= protein_coding
chr1	155127876	155134857	155127876	155134857	+	ENST00000368406.2@EFNA1	ENST00000368406.2	protein_coding	155127876,155131339,155133730,155133955	155128069,155131634,155133780,155134857	Gene ID= ENSG00000169242.11 TPM= 6.76 Transcript Type= protein_coding
chr1	155135858	155138851	155135858	155138851	+	ENST00000368401.5@SLC50A1	ENST00000368401.5	protein_coding	155135858,155136299,155137561,155137979,155138180	155135991,155136376,155137722,155138098,155138851	Gene ID= ENSG00000169241.17 TPM= 1.93 Transcript Type= protein_coding
chr1	155139891	155140595	155139891	155140595	-	ENST00000341298.3@DPM3	ENST00000341298.3	protein_coding	155140491,155139891	155140595,155140271	Gene ID= ENSG00000179085.7 TPM= 11.1 Transcript Type= protein_coding
chr1	155139891	155140544	155139891	155140544	-	ENST00000368400.4@DPM3	ENST00000368400.4	protein_coding	155140491,155139891	155140544,155140245	Gene ID= ENSG00000179085.7 TPM= 23.65 Transcript Type= protein_coding
chr1	155169408	155173333	155169408	155173333	-	ENST00000295682.4@KRTCAP2	ENST00000295682.4	protein_coding	155173221,155172738,155172565,155169791,155169408	155173333,155172892,155172628,155169857,155169560	Gene ID= ENSG00000163463.11 TPM= 123.56 Transcript Type= protein_coding
chr1	155208699	155213823	155208699	155213823	+	ENST00000368376.7@MTX1	ENST00000368376.7	protein_coding	155208699,155210346,155210548,155212127,155212385,155212694,155213237,155213484	155209332,155210415,155210627,155212219,155212567,155212770,155213391,155213823	Gene ID= ENSG00000173171.14 TPM= 22.44 Transcript Type= protein_coding
chr1	155208797	155213823	155208797	155213823	+	ENST00000316721.8@MTX1	ENST00000316721.8	protein_coding	155208797,155210346,155210548,155212385,155212694,155213237,155213484	155209332,155210415,155210627,155212567,155212770,155213391,155213823	Gene ID= ENSG00000173171.14 TPM= 3.14 Transcript Type= protein_coding
chr1	155209251	155213823	155209251	155213823	+	ENST00000481771.5@MTX1	ENST00000481771.5	protein_coding	155209251,155210346,155210548,155212385,155212694,155213237,155213484	155209332,155210415,155212219,155212567,155212770,155213391,155213823	Gene ID= ENSG00000173171.14 TPM= 3.14 Transcript Type= retained_intron
chr1	155209247	155213824	155209247	155213824	+	ENST00000609421.1@MTX1	ENST00000609421.1	protein_coding	155209247,155210346,155210548,155212127,155212385,155212694,155213237,155213484	155209332,155210415,155210627,155212219,155212567,155212770,155213391,155213824	Gene ID= ENSG00000173171.14 TPM= 8.93 Transcript Type= protein_coding
chr1	155231270	155232338	155231270	155232338	-	transcript7503.chr1.nnic@NA	transcript7503.chr1.nnic	NA	155231270	155232338	Gene ID= novel_gene_chr1_7504 TPM= 1.93 Transcript Type= NA
chr1	155234452	155241234	155234452	155241234	-	ENST00000368373.7@GBA	ENST00000368373.7	protein_coding	155241086,155240630,155239886,155239616,155238517,155238134,155237341,155236245,155235681,155235195,155234452	155241234,155240717,155240077,155239762,155238650,155238306,155237578,155236469,155235844,155235311,155235100	Gene ID= ENSG00000177628.15 TPM= 9.65 Transcript Type= protein_coding
chr1	155255981	155262373	155255981	155262373	-	transcript7511.chr1.nnic@SCAMP3	transcript7511.chr1.nnic	protein_coding	155262086,155261657,155260537,155260330,155258826,155257498,155257285,155256674,155255981	155262373,155261734,155260659,155260450,155258954,155257657,155257334,155256791,155256419	Gene ID= ENSG00000116521.10 TPM= 3.33 Transcript Type= NA
chr1	155255981	155262373	155255981	155262373	-	transcript7513.chr1.nnic@SCAMP3	transcript7513.chr1.nnic	protein_coding	155262086,155261657,155260537,155260330,155258826,155257498,155257285,155256674,155255981	155262373,155261734,155260659,155260450,155258912,155257657,155257386,155256791,155256419	Gene ID= ENSG00000116521.10 TPM= 10.33 Transcript Type= NA
chr1	155255981	155262430	155255981	155262430	-	ENST00000355379.3@SCAMP3	ENST00000355379.3	protein_coding	155262086,155260537,155260330,155258826,155257498,155257285,155256674,155255981	155262430,155260659,155260450,155258954,155257657,155257386,155256791,155256419	Gene ID= ENSG00000116521.10 TPM= 24.81 Transcript Type= protein_coding
chr1	155255979	155262259	155255979	155262259	-	ENST00000302631.7@SCAMP3	ENST00000302631.7	protein_coding	155262086,155261657,155260537,155260330,155258826,155257498,155257285,155256674,155255979	155262259,155261734,155260659,155260450,155258954,155257657,155257386,155256791,155256419	Gene ID= ENSG00000116521.10 TPM= 55.46 Transcript Type= protein_coding
chr1	155262868	155273516	155262868	155273516	-	ENST00000368361.8@CLK2	ENST00000368361.8	protein_coding	155273201,155270808,155269488,155268708,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155262868	155273516,155270977,155269716,155268795,155268359,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263400	Gene ID= ENSG00000176444.18 TPM= 28.16 Transcript Type= protein_coding
chr1	155262868	155273506	155262868	155273506	-	transcript7527.chr1.nic@CLK2	transcript7527.chr1.nic	protein_coding	155273201,155270808,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155262868	155273506,155270977,155269716,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263400	Gene ID= ENSG00000176444.18 TPM= 4.03 Transcript Type= NA
chr1	155262874	155273482	155262874	155273482	-	ENST00000355560.4@CLK2	ENST00000355560.4	protein_coding	155273201,155270808,155269488,155268708,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155262874	155273482,155270977,155269713,155268792,155268359,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263400	Gene ID= ENSG00000176444.18 TPM= 3.54 Transcript Type= protein_coding
chr1	155308852	155320665	155308852	155320665	+	ENST00000368356.8@FDPS	ENST00000368356.8	protein_coding	155308852,155309789,155310043,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155308965,155309965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320665	Gene ID= ENSG00000160752.14 TPM= 5.31 Transcript Type= protein_coding
chr1	155309730	155320665	155309730	155320665	+	transcript7534.chr1.nic@FDPS	transcript7534.chr1.nic	protein_coding	155309730,155310043,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155309965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320665	Gene ID= ENSG00000160752.14 TPM= 2.41 Transcript Type= NA
chr1	155308889	155320647	155308889	155320647	+	ENST00000467076.5@FDPS	ENST00000467076.5	protein_coding	155308889,155310064,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155308965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320647	Gene ID= ENSG00000160752.14 TPM= 24.13 Transcript Type= protein_coding
chr1	155323491	155331114	155323491	155331114	+	transcript7538.chr1.nic@RUSC1	transcript7538.chr1.nic	protein_coding	155323491,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155323727,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 2.73 Transcript Type= NA
chr1	155323937	155331114	155323937	155331114	+	ENST00000368347.8@RUSC1	ENST00000368347.8	protein_coding	155323937,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155324544,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 1.77 Transcript Type= protein_coding
chr1	155324513	155331112	155324513	155331112	+	ENST00000368349.8@RUSC1	ENST00000368349.8	protein_coding	155324513,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155324587,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331112	Gene ID= ENSG00000160753.15 TPM= 1.28 Transcript Type= protein_coding
chr1	155480736	155562831	155480736	155562831	-	transcript7549.chr1.nic@ASH1L	transcript7549.chr1.nic	protein_coding	155562153,155521100,155480736	155562831,155521618,155482449	Gene ID= ENSG00000116539.12 TPM= 27.03 Transcript Type= NA
chr1	155480736	155562831	155480736	155562831	-	transcript7550.chr1.nnic@ASH1L	transcript7550.chr1.nnic	protein_coding	155562779,155521100,155480736	155562831,155521618,155482449	Gene ID= ENSG00000116539.12 TPM= 15.44 Transcript Type= NA
chr1	155562042	155563944	155562042	155563944	+	transcript7551.chr1.nnic@NA	transcript7551.chr1.nnic	NA	155562042	155563944	Gene ID= novel_gene_chr1_7552 TPM= 4.83 Transcript Type= NA
chr1	155610225	155614967	155610225	155614967	+	ENST00000245564.6@MSTO1	ENST00000245564.6	protein_coding	155610225,155610425,155611039,155611216,155611549,155611689,155611983,155612182,155612418,155612844,155613049,155613462,155613657,155614059	155610332,155610560,155611108,155611291,155611603,155611827,155612100,155612316,155612570,155612975,155613233,155613566,155613766,155614967	Gene ID= ENSG00000125459.14 TPM= 4.83 Transcript Type= protein_coding
chr1	155659446	155688777	155659446	155688777	-	transcript7581.chr1.nic@YY1AP1	transcript7581.chr1.nic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672521,155670320,155668627,155661307,155659446	155688777,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 7.15 Transcript Type= NA
chr1	155659446	155688668	155659446	155688668	-	transcript7582.chr1.nic@YY1AP1	transcript7582.chr1.nic	protein_coding	155688579,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688668,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 9.08 Transcript Type= NA
chr1	155659446	155688777	155659446	155688777	-	transcript7591.chr1.nnic@YY1AP1	transcript7591.chr1.nnic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155670320,155668627,155661307,155659446	155688777,155688201,155680456,155679512,155676746,155675096,155670464,155668717,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 7.15 Transcript Type= NA
chr1	155659443	155688656	155659443	155688656	-	ENST00000368339.9@YY1AP1	ENST00000368339.9	protein_coding	155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659443	155688656,155680456,155679512,155676746,155675096,155672731,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 6.91 Transcript Type= protein_coding
chr1	155659446	155688774	155659446	155688774	-	ENST00000359205.9@YY1AP1	ENST00000359205.9	protein_coding	155688659,155688071,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688774,155688201,155679512,155676746,155675096,155672731,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 6.91 Transcript Type= protein_coding
chr1	155659456	155688718	155659456	155688718	-	transcript7598.chr1.nic@YY1AP1	transcript7598.chr1.nic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155659456	155688718,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668777,155661423	Gene ID= ENSG00000163374.19 TPM= 5.19 Transcript Type= NA
chr1	155671737	155688777	155671737	155688777	-	transcript7603.chr1.nic@YY1AP1	transcript7603.chr1.nic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155671737	155688777,155688201,155680456,155679512,155676746,155675096,155672731	Gene ID= ENSG00000163374.19 TPM= 3.86 Transcript Type= NA
chr1	155671737	155688354	155671737	155688354	-	transcript7604.chr1.nic@YY1AP1	transcript7604.chr1.nic	protein_coding	155688071,155680416,155679409,155676548,155675010,155671737	155688354,155680456,155679512,155676746,155675096,155672731	Gene ID= ENSG00000163374.19 TPM= 2.9 Transcript Type= NA
chr1	155659446	155688757	155659446	155688757	-	ENST00000404643.5@YY1AP1	ENST00000404643.5	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688757,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 36.11 Transcript Type= protein_coding
chr1	155659446	155688748	155659446	155688748	-	ENST00000361140.8@YY1AP1	ENST00000361140.8	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688748,155688201,155680456,155679512,155676746,155675096,155672727,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 16.08 Transcript Type= nonsense_mediated_decay
chr1	155689047	155739010	155689047	155739010	+	transcript7560.chr1.nic@DAP3	transcript7560.chr1.nic	protein_coding	155689047,155709033,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155689174,155709125,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155739010	Gene ID= ENSG00000132676.15 TPM= 5.79 Transcript Type= NA
chr1	155689058	155739010	155689058	155739010	+	ENST00000368336.9@DAP3	ENST00000368336.9	protein_coding	155689058,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155689174,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155739010	Gene ID= ENSG00000132676.15 TPM= 17.38 Transcript Type= protein_coding
chr1	155689091	155738526	155689091	155738526	+	ENST00000421487.6@DAP3	ENST00000421487.6	protein_coding	155689091,155709773,155717006,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155689174,155709824,155717128,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738526	Gene ID= ENSG00000132676.15 TPM= 6.11 Transcript Type= protein_coding
chr1	155689083	155738526	155689083	155738526	+	ENST00000343043.7@DAP3	ENST00000343043.7	protein_coding	155689083,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155689243,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738526	Gene ID= ENSG00000132676.15 TPM= 8.04 Transcript Type= protein_coding
chr1	155749717	155859400	155749717	155859400	-	ENST00000437809.5@GON4L	ENST00000437809.5	protein_coding	155859304,155853276,155826837,155822286,155821474,155820606,155816212,155815805,155814330,155813634,155804949,155795050,155785334,155783986,155777622,155776395,155775002,155773066,155771067,155767425,155765000,155763312,155762190,155760444,155757891,155757180,155756958,155754375,155753204,155751960,155751767,155749717	155859400,155853806,155827028,155822476,155821548,155820656,155816262,155815900,155814449,155813804,155805141,155795151,155785374,155784089,155777820,155776481,155775173,155773210,155771217,155767541,155766709,155763564,155762374,155760641,155758034,155757323,155757077,155754488,155753414,155752587,155751869,155750733	Gene ID= ENSG00000116580.18 TPM= 8.69 Transcript Type= protein_coding
chr1	155897808	155911404	155897808	155911404	-	ENST00000368323.7@RIT1	ENST00000368323.7	protein_coding	155911243,155910656,155910450,155904731,155904311,155897808	155911404,155910804,155910506,155904804,155904502,155900618	Gene ID= ENSG00000143622.10 TPM= 1.93 Transcript Type= protein_coding
chr1	155913043	155934416	155913043	155934416	-	transcript7615.chr1.nic@KIAA0907	transcript7615.chr1.nic	protein_coding	155934336,155933633,155929712,155929296,155927104,155926676,155925632,155923627,155921861,155921375,155917499,155916625,155915873,155913043	155934416,155933849,155929840,155929375,155927156,155926839,155925843,155923687,155921918,155921527,155917672,155916709,155915964,155914320	Gene ID= ENSG00000132680.10 TPM= 1.93 Transcript Type= NA
chr1	155916904	155934416	155916904	155934416	-	transcript7618.chr1.nic@KIAA0907	transcript7618.chr1.nic	protein_coding	155934336,155933633,155929712,155929296,155927104,155926676,155925632,155923627,155921861,155921375,155916904	155934416,155933849,155929840,155929375,155927156,155926839,155925843,155923687,155921918,155921527,155917672	Gene ID= ENSG00000132680.10 TPM= 1.93 Transcript Type= NA
chr1	155913043	155934397	155913043	155934397	-	ENST00000368321.7@KIAA0907	ENST00000368321.7	protein_coding	155934336,155933633,155929712,155929296,155927104,155926676,155925632,155923627,155921861,155921375,155917499,155916625,155915873,155913043	155934397,155933849,155929840,155929375,155927156,155926839,155925843,155923687,155921918,155921628,155917672,155916737,155915964,155914320	Gene ID= ENSG00000132680.10 TPM= 4.83 Transcript Type= protein_coding
chr1	155946855	155951238	155946855	155951238	-	transcript7620.chr1.nic@ARHGEF2	transcript7620.chr1.nic	protein_coding	155950829,155950299,155946855	155951238,155950482,155948015	Gene ID= ENSG00000116584.17 TPM= 5.79 Transcript Type= NA
chr1	156009048	156020959	156009048	156020959	-	ENST00000295702.8@SSR2	ENST00000295702.8	protein_coding	156020888,156020013,156018270,156014961,156011810,156009048	156020959,156020167,156018368,156015069,156011887,156009650	Gene ID= ENSG00000163479.13 TPM= 71.43 Transcript Type= protein_coding
chr1	156035301	156053794	156035301	156053794	-	ENST00000368309.3@UBQLN4	ENST00000368309.3	protein_coding	156053594,156051706,156051110,156050291,156048501,156043998,156042774,156042153,156041872,156041485,156035301	156053794,156051857,156051327,156050553,156048659,156044223,156042913,156042236,156041987,156041671,156037130	Gene ID= ENSG00000160803.7 TPM= 49.23 Transcript Type= protein_coding
chr1	156054752	156058510	156054752	156058510	+	ENST00000368305.8@LAMTOR2	ENST00000368305.8	protein_coding	156054752,156055263,156057978,156058315	156054957,156055425,156058067,156058510	Gene ID= ENSG00000116586.11 TPM= 71.43 Transcript Type= protein_coding
chr1	156054792	156058506	156054792	156058506	+	ENST00000368304.9@LAMTOR2	ENST00000368304.9	protein_coding	156054792,156055263,156058315	156054957,156055425,156058506	Gene ID= ENSG00000116586.11 TPM= 5.79 Transcript Type= protein_coding
chr1	156114707	156140089	156114707	156140089	+	ENST00000368300.8@LMNA	ENST00000368300.8	protein_coding	156114707,156130617,156134403,156134805,156135187,156135901,156136214,156136921,156137113,156137654,156138488,156139080	156115274,156130773,156134528,156134975,156135312,156136121,156136436,156137028,156137232,156137743,156138757,156140089	Gene ID= ENSG00000160789.19 TPM= 45.85 Transcript Type= protein_coding
chr1	156114722	156139317	156114722	156139317	+	ENST00000368299.7@LMNA	ENST00000368299.7	protein_coding	156114722,156130617,156134403,156134805,156135187,156135901,156136214,156136921,156137113,156137654,156138488,156139080	156115274,156130773,156134528,156134975,156135312,156136121,156136436,156137028,156137232,156137743,156138607,156139317	Gene ID= ENSG00000160789.19 TPM= 5.79 Transcript Type= protein_coding
chr1	156139244	156141153	156139244	156141153	-	transcript7643.chr1.nnic@NA	transcript7643.chr1.nnic	NA	156139244	156141153	Gene ID= novel_gene_chr1_7644 TPM= 26.06 Transcript Type= NA
chr1	156194089	156212796	156194089	156212796	+	ENST00000359511.4@SLC25A44	ENST00000359511.4	protein_coding	156194089,156199835,156207886,156210240	156194247,156200472,156208013,156212796	Gene ID= ENSG00000160785.13 TPM= 22.2 Transcript Type= protein_coding
chr1	156212762	156213244	156212762	156213244	-	transcript7653.chr1.nnic@NA	transcript7653.chr1.nnic	NA	156212762	156213244	Gene ID= novel_gene_chr1_7654 TPM= 1.93 Transcript Type= NA
chr1	156212982	156243332	156212982	156243332	+	ENST00000490491.5@PMF1-BGLAP	ENST00000490491.5	protein_coding	156212982,156232320,156233628,156236288,156242553,156242762,156243033	156213176,156232425,156233728,156236483,156242591,156242831,156243332	Gene ID= ENSG00000260238.6 TPM= 4.34 Transcript Type= protein_coding
chr1	156213007	156240042	156213007	156240042	+	ENST00000368277.3@PMF1	ENST00000368277.3	protein_coding	156213007,156232320,156233628,156236288,156239548	156213176,156232425,156233728,156236483,156240042	Gene ID= ENSG00000160783.19 TPM= 48.75 Transcript Type= protein_coding
chr1	156249224	156282841	156249224	156282841	-	transcript7660.chr1.nnic@SMG5	transcript7660.chr1.nnic	protein_coding	156282607,156278936,156277925,156277085,156274597,156273361,156272320,156268290,156268115,156267470,156266541,156265781,156263395,156261333,156260451,156253449,156252919,156252414,156251403,156250858,156249224	156282841,156279034,156278048,156277241,156274686,156273450,156272398,156268415,156268183,156267678,156266678,156266380,156263570,156261408,156260626,156253508,156253078,156252504,156251477,156250996,156250670	Gene ID= ENSG00000198952.8 TPM= 4.18 Transcript Type= NA
chr1	156249224	156282841	156249224	156282841	-	transcript7661.chr1.nic@SMG5	transcript7661.chr1.nic	protein_coding	156282607,156278936,156277925,156277085,156274597,156273361,156272320,156268290,156268115,156267470,156266541,156265781,156263395,156261333,156260451,156259005,156253449,156252919,156252414,156250858,156249224	156282841,156279034,156278048,156277241,156274686,156273450,156272398,156268415,156268183,156267678,156266678,156266380,156263570,156261408,156260626,156259163,156253508,156253078,156252504,156251477,156250670	Gene ID= ENSG00000198952.8 TPM= 10.94 Transcript Type= NA
chr1	156249224	156282825	156249224	156282825	-	ENST00000361813.5@SMG5	ENST00000361813.5	protein_coding	156282607,156278936,156277925,156277085,156274597,156273361,156272320,156268290,156268115,156267470,156266541,156265781,156263395,156261333,156260451,156259005,156253449,156252919,156252414,156251403,156250858,156249224	156282825,156279034,156278048,156277241,156274686,156273450,156272398,156268415,156268183,156267678,156266678,156266380,156263570,156261408,156260626,156259163,156253508,156253078,156252504,156251477,156250996,156250670	Gene ID= ENSG00000198952.8 TPM= 120.02 Transcript Type= protein_coding
chr1	156282948	156292443	156282948	156292443	+	ENST00000295694.9@TMEM79	ENST00000295694.9	protein_coding	156282948,156285184,156286260,156291385	156283065,156285983,156286473,156292443	Gene ID= ENSG00000163472.18 TPM= 4.83 Transcript Type= protein_coding
chr1	156292688	156295672	156292688	156295672	-	ENST00000362007.5@GLMP	ENST00000362007.5	protein_coding	156295526,156294759,156294365,156294018,156293320,156292688	156295672,156295016,156294565,156294236,156293576,156293209	Gene ID= ENSG00000198715.11 TPM= 1.93 Transcript Type= protein_coding
chr1	156308968	156338465	156308968	156338465	-	ENST00000295688.7@CCT3	ENST00000295688.7	protein_coding	156338154,156335827,156334868,156334713,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156308968	156338465,156335888,156334918,156334775,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303	Gene ID= ENSG00000163468.14 TPM= 490.38 Transcript Type= protein_coding
chr1	156309014	156338247	156309014	156338247	-	ENST00000368262.7@CCT3	ENST00000368262.7	protein_coding	156338154,156337079,156335827,156334868,156334713,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156309014	156338247,156337240,156335888,156334918,156334775,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303	Gene ID= ENSG00000163468.14 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr1	156466210	156499903	156466210	156499903	-	transcript7695.chr1.nnic@MEF2D	transcript7695.chr1.nnic	protein_coding	156499835,156483239,156482437,156480643,156479586,156479290,156477012,156476494,156475108,156468780,156467993,156466210	156499903,156483430,156482640,156480777,156479796,156479346,156477202,156476514,156475237,156469020,156468299,156467656	Gene ID= ENSG00000116604.17 TPM= 55.31 Transcript Type= NA
chr1	156466210	156500844	156466210	156500844	-	transcript7696.chr1.nic@MEF2D	transcript7696.chr1.nic	protein_coding	156500486,156483239,156482437,156480643,156479586,156479290,156477012,156476494,156475108,156468780,156467993,156466210	156500844,156483430,156482640,156480777,156479796,156479346,156477202,156476514,156475237,156469020,156468299,156467656	Gene ID= ENSG00000116604.17 TPM= 76.23 Transcript Type= NA
chr1	156485703	156489472	156485703	156489472	-	transcript7717.chr1.nnic@NA	transcript7717.chr1.nnic	NA	156485703	156489472	Gene ID= novel_gene_chr1_7718 TPM= 2.9 Transcript Type= NA
chr1	156491454	156495776	156491454	156495776	+	transcript7715.chr1.nnic@NA	transcript7715.chr1.nnic	NA	156491454	156495776	Gene ID= novel_gene_chr1_7716 TPM= 104.25 Transcript Type= NA
chr1	156501653	156501779	156501653	156501779	-	transcript7723.chr1.nnic@NA	transcript7723.chr1.nnic	NA	156501653	156501779	Gene ID= novel_gene_chr1_7724 TPM= 1.93 Transcript Type= NA
chr1	156501905	156505002	156501905	156505002	-	transcript7721.chr1.nnic@NA	transcript7721.chr1.nnic	NA	156501905	156505002	Gene ID= novel_gene_chr1_7722 TPM= 1.93 Transcript Type= NA
chr1	156504846	156507143	156504846	156507143	+	transcript7719.chr1.nnic@NA	transcript7719.chr1.nnic	NA	156504846	156507143	Gene ID= novel_gene_chr1_7720 TPM= 12.55 Transcript Type= NA
chr1	156509117	156511664	156509117	156511664	+	transcript7726.chr1.nnic@NA	transcript7726.chr1.nnic	NA	156509117	156511664	Gene ID= novel_gene_chr1_7727 TPM= 6.76 Transcript Type= NA
chr1	156591762	156594299	156591762	156594299	+	ENST00000368235.7@NAXE	ENST00000368235.7	protein_coding	156591762,156592101,156592365,156592557,156593408,156593882	156591986,156592209,156592475,156592670,156593555,156594299	Gene ID= ENSG00000163382.11 TPM= 70.47 Transcript Type= protein_coding
chr1	156591760	156594131	156591760	156594131	+	transcript7750.chr1.nnic@NAXE	transcript7750.chr1.nnic	protein_coding	156591760,156592101,156592557,156593408,156593882	156591986,156592209,156592670,156593555,156594131	Gene ID= ENSG00000163382.11 TPM= 2.9 Transcript Type= NA
chr1	156594487	156601483	156594487	156601483	-	ENST00000368232.8@GPATCH4	ENST00000368232.8	protein_coding	156601409,156598968,156598421,156598227,156598035,156596387,156596081,156594487	156601483,156599104,156598494,156598319,156598121,156596478,156596131,156595849	Gene ID= ENSG00000160818.16 TPM= 29.92 Transcript Type= protein_coding
chr1	156595445	156601490	156595445	156601490	-	ENST00000415314.6@GPATCH4	ENST00000415314.6	protein_coding	156601409,156598968,156598421,156598227,156596387,156596081,156595445	156601490,156599104,156598494,156598319,156596478,156596131,156595849	Gene ID= ENSG00000160818.16 TPM= 3.86 Transcript Type= protein_coding
chr1	156668763	156677397	156668763	156677397	-	ENST00000368223.3@NES	ENST00000368223.3	protein_coding	156676482,156675216,156673454,156668763	156677397,156675340,156673527,156673205	Gene ID= ENSG00000132688.10 TPM= 21.24 Transcript Type= protein_coding
chr1	156722603	156728455	156722603	156728455	-	transcript7760.chr1.nnic@ISG20L2	transcript7760.chr1.nnic	protein_coding	156728277,156726906,156724148,156722603	156728455,156727769,156724348,156723462	Gene ID= ENSG00000143319.16 TPM= 2.9 Transcript Type= NA
chr1	156722603	156728799	156722603	156728799	-	ENST00000368219.1@ISG20L2	ENST00000368219.1	protein_coding	156728415,156726906,156724148,156722603	156728799,156727769,156724348,156723462	Gene ID= ENSG00000143319.16 TPM= 1.93 Transcript Type= protein_coding
chr1	156728922	156736949	156728922	156736949	+	transcript7767.chr1.nic@RRNAD1	transcript7767.chr1.nic	protein_coding	156728922,156731991,156732281,156732985,156733377,156734009,156735725,156736632	156729215,156732115,156732473,156733047,156733520,156734052,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 3.14 Transcript Type= NA
chr1	156728475	156736949	156728475	156736949	+	ENST00000368216.8@RRNAD1	ENST00000368216.8	protein_coding	156728475,156731991,156732281,156732985,156733377,156734009,156735725,156736632	156729215,156732115,156732473,156733047,156733520,156734493,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 2.17 Transcript Type= protein_coding
chr1	156728442	156736949	156728442	156736949	+	ENST00000368218.8@RRNAD1	ENST00000368218.8	protein_coding	156728442,156731991,156732281,156732985,156733377,156735725,156736632	156729215,156732115,156732473,156733047,156733520,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 7.96 Transcript Type= protein_coding
chr1	156728641	156736949	156728641	156736949	+	transcript7776.chr1.nnic@RRNAD1	transcript7776.chr1.nnic	protein_coding	156728641,156731991,156732985,156733377,156734009,156735725,156736619	156729215,156732473,156733047,156733520,156734493,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 2.9 Transcript Type= NA
chr1	156728621	156736949	156728621	156736949	+	transcript7781.chr1.nic@RRNAD1	transcript7781.chr1.nic	protein_coding	156728621,156731991,156732985,156733377,156735725,156736632	156729215,156732473,156733047,156733520,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 2.17 Transcript Type= NA
chr1	156728774	156730244	156728774	156730244	+	transcript7784.chr1.nnic@NA	transcript7784.chr1.nnic	NA	156728774	156730244	Gene ID= novel_gene_chr1_7785 TPM= 9.65 Transcript Type= NA
chr1	156737305	156741131	156737305	156741131	-	ENST00000368211.8@MRPL24	ENST00000368211.8	protein_coding	156741053,156738522,156738343,156738031,156737646,156737305	156741131,156738764,156738438,156738134,156737776,156737534	Gene ID= ENSG00000143314.12 TPM= 30.24 Transcript Type= protein_coding
chr1	156737303	156741132	156737303	156741132	-	transcript7791.chr1.nnic@MRPL24	transcript7791.chr1.nnic	protein_coding	156741053,156738522,156738423,156738031,156737646,156737303	156741132,156738764,156738438,156738134,156737776,156737534	Gene ID= ENSG00000143314.12 TPM= 5.15 Transcript Type= NA
chr1	156737303	156741088	156737303	156741088	-	ENST00000361531.6@MRPL24	ENST00000361531.6	protein_coding	156741012,156738522,156738343,156738031,156737646,156737303	156741088,156738764,156738438,156738134,156737776,156737534	Gene ID= ENSG00000143314.12 TPM= 24.45 Transcript Type= protein_coding
chr1	156742110	156751721	156742110	156751721	-	transcript7801.chr1.nic@HDGF	transcript7801.chr1.nic	protein_coding	156751343,156745297,156745008,156744501,156744163,156743652,156742110	156751721,156745373,156745146,156744570,156744348,156743878,156743455	Gene ID= ENSG00000143321.18 TPM= 56.95 Transcript Type= NA
chr1	156742107	156751744	156742107	156751744	-	ENST00000357325.9@HDGF	ENST00000357325.9	protein_coding	156751343,156745297,156745008,156744163,156743652,156742107	156751744,156745373,156745146,156744348,156743878,156743455	Gene ID= ENSG00000143321.18 TPM= 350.41 Transcript Type= protein_coding
chr1	156767514	156800817	156767514	156800817	+	transcript7821.chr1.nnic@PRCC	transcript7821.chr1.nnic	protein_coding	156767514,156782282,156786608,156787531,156791697,156794665,156797276,156800374	156768239,156782329,156787174,156787551,156791792,156794808,156797341,156800817	Gene ID= ENSG00000143294.14 TPM= 5.79 Transcript Type= NA
chr1	156767500	156800817	156767500	156800817	+	ENST00000271526.8@PRCC	ENST00000271526.8	protein_coding	156767500,156782282,156786608,156791697,156794665,156797276,156800374	156768239,156782329,156787174,156791792,156794808,156797341,156800817	Gene ID= ENSG00000143294.14 TPM= 86.88 Transcript Type= protein_coding
chr1	156787652	156791037	156787652	156791037	-	transcript7827.chr1.nnic@NA	transcript7827.chr1.nnic	NA	156787652	156791037	Gene ID= novel_gene_chr1_7828 TPM= 5.79 Transcript Type= NA
chr1	157794536	157820144	157794536	157820144	-	transcript7833.chr1.nic@FCRL1	transcript7833.chr1.nic	protein_coding	157820007,157807102,157803845,157802377,157801915,157800058,157798161,157797868,157797101,157794536	157820144,157807122,157804111,157802664,157802193,157800085,157798243,157797939,157797132,157796170	Gene ID= ENSG00000163534.14 TPM= 1.93 Transcript Type= NA
chr1	159204281	159206500	159204281	159206500	+	ENST00000368122.2@ACKR1	ENST00000368122.2	protein_coding	159204281,159205461	159204980,159206500	Gene ID= ENSG00000213088.9 TPM= 25.1 Transcript Type= protein_coding
chr1	159780960	159782543	159780960	159782543	+	ENST00000368108.7@DUSP23	ENST00000368108.7	protein_coding	159780960,159781099,159782153	159780993,159781367,159782543	Gene ID= ENSG00000158716.8 TPM= 29.44 Transcript Type= protein_coding
chr1	159781003	159782543	159781003	159782543	+	ENST00000368107.1@DUSP23	ENST00000368107.1	protein_coding	159781003,159782153	159781367,159782543	Gene ID= ENSG00000158716.8 TPM= 37.16 Transcript Type= protein_coding
chr1	159918107	159925732	159918107	159925732	-	ENST00000368097.8@TAGLN2	ENST00000368097.8	protein_coding	159925450,159920330,159919661,159919274,159918107	159925732,159920537,159919835,159919376,159918941	Gene ID= ENSG00000158710.14 TPM= 51.16 Transcript Type= protein_coding
chr1	160091340	160098689	160091340	160098689	-	ENST00000314485.11@IGSF8	ENST00000314485.11	protein_coding	160098409,160094869,160093710,160092924,160092282,160091808,160091340	160098689,160095246,160094171,160093331,160092695,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 10.62 Transcript Type= protein_coding
chr1	160115773	160143591	160115773	160143591	+	ENST00000361216.7@ATP1A2	ENST00000361216.7	protein_coding	160115773,160120906,160121192,160123213,160123943,160124296,160125136,160127552,160128652,160128980,160129266,160130102,160130422,160134484,160135145,160135434,160135839,160136247,160136570,160136901,160139640,160139893,160141294	160115873,160121010,160121251,160123416,160124056,160124430,160125253,160127820,160128850,160129089,160129400,160130291,160130597,160134620,160135295,160135602,160135993,160136370,160136715,160137031,160139741,160139984,160143591	Gene ID= ENSG00000018625.14 TPM= 374.54 Transcript Type= protein_coding
chr1	160190556	160201886	160190556	160201886	+	ENST00000368078.7@CASQ1	ENST00000368078.7	protein_coding	160190556,160192802,160193747,160195012,160195461,160195897,160197569,160198677,160198953,160199851,160201245	160191030,160192886,160193847,160195123,160195534,160196027,160197614,160198731,160199053,160199925,160201886	Gene ID= ENSG00000143318.12 TPM= 1058.95 Transcript Type= protein_coding
chr1	160205337	160215376	160205337	160215376	+	ENST00000360472.8@PEA15	ENST00000360472.8	protein_coding	160205337,160211543,160213110,160213422	160205522,160211716,160213265,160215376	Gene ID= ENSG00000162734.12 TPM= 37.65 Transcript Type= protein_coding
chr1	160215715	160262487	160215715	160262487	-	transcript7928.chr1.nic@DCAF8	transcript7928.chr1.nic	protein_coding	160262117,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262487,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 23.92 Transcript Type= NA
chr1	160215715	160262488	160215715	160262488	-	transcript7929.chr1.nic@DCAF8	transcript7929.chr1.nic	protein_coding	160262276,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262488,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 9.12 Transcript Type= NA
chr1	160215715	160262564	160215715	160262564	-	transcript7930.chr1.nic@DCAF8	transcript7930.chr1.nic	protein_coding	160262449,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262564,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 32.61 Transcript Type= NA
chr1	160237134	160262470	160237134	160262470	-	transcript7956.chr1.nic@DCAF8	transcript7956.chr1.nic	protein_coding	160262117,160261285,160243960,160239697,160238607,160237134	160262470,160261358,160244034,160240370,160238747,160237229	Gene ID= ENSG00000132716.18 TPM= 10.3 Transcript Type= NA
chr1	160215715	160262451	160215715	160262451	-	ENST00000368073.7@DCAF8	ENST00000368073.7	protein_coding	160262117,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262451,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 19.74 Transcript Type= protein_coding
chr1	160215715	160262476	160215715	160262476	-	ENST00000326837.6@DCAF8	ENST00000326837.6	protein_coding	160262276,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262476,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 19.74 Transcript Type= protein_coding
chr1	160215715	160262501	160215715	160262501	-	ENST00000368074.5@DCAF8	ENST00000368074.5	protein_coding	160262449,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262501,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 10.09 Transcript Type= protein_coding
chr1	160276812	160285146	160276812	160285146	-	ENST00000368072.9@PEX19	ENST00000368072.9	protein_coding	160285055,160283530,160282944,160282417,160282039,160280070,160279801,160276812	160285146,160283639,160283109,160282502,160282200,160280246,160279845,160279634	Gene ID= ENSG00000162735.18 TPM= 6.76 Transcript Type= protein_coding
chr1	160289273	160343400	160289273	160343400	-	ENST00000241704.7@COPA	ENST00000241704.7	protein_coding	160343131,160340181,160339909,160335242,160333603,160332448,160325543,160323431,160313990,160313085,160311868,160310192,160309101,160307163,160306354,160305688,160305433,160299102,160298845,160297556,160297343,160296061,160295736,160294768,160294484,160293386,160293166,160292484,160292012,160291819,160291335,160290492,160289273	160343400,160340294,160339982,160335322,160333679,160332557,160325652,160323530,160314125,160313167,160312018,160310258,160309176,160307245,160306493,160305773,160305571,160299264,160298991,160297745,160297438,160296149,160295859,160294857,160294593,160293463,160293234,160292620,160292198,160291929,160291496,160290686,160290216	Gene ID= ENSG00000122218.14 TPM= 71.43 Transcript Type= protein_coding
chr1	160289273	160343248	160289273	160343248	-	ENST00000368069.7@COPA	ENST00000368069.7	protein_coding	160343131,160340181,160339909,160335242,160333603,160332448,160325543,160323431,160313990,160313085,160311868,160310192,160309101,160307163,160306354,160305688,160305433,160299102,160298845,160297556,160297343,160296061,160295736,160294768,160294484,160293386,160293166,160292484,160292012,160291819,160291335,160290492,160289273	160343248,160340294,160339982,160335322,160333679,160332557,160325652,160323530,160314125,160313167,160312018,160310258,160309176,160307245,160306493,160305773,160305598,160299264,160298991,160297745,160297438,160296149,160295859,160294857,160294593,160293463,160293234,160292620,160292198,160291929,160291496,160290686,160290216	Gene ID= ENSG00000122218.14 TPM= 13.51 Transcript Type= protein_coding
chr1	160343272	160358952	160343272	160358952	+	ENST00000294785.9@NCSTN	ENST00000294785.9	protein_coding	160343272,160344722,160348999,160349549,160350105,160351222,160351696,160352054,160352887,160353160,160354118,160355655,160355863,160356260,160356600,160357041,160358149	160343481,160344826,160349122,160349670,160350250,160351372,160351805,160352206,160352991,160353237,160354290,160355757,160355958,160356347,160356754,160357253,160358952	Gene ID= ENSG00000162736.15 TPM= 22.2 Transcript Type= protein_coding
chr1	160995211	161021348	160995211	161021348	-	ENST00000368026.10@F11R	ENST00000368026.10	protein_coding	161021010,161001285,161001020,161000631,161000146,160999876,160999640,160999396,160999043,160995211	161021348,161001353,161001127,161000777,161000348,160999978,160999747,160999408,160999091,160998906	Gene ID= ENSG00000158769.17 TPM= 7.72 Transcript Type= protein_coding
chr1	161037631	161038990	161037631	161038990	-	ENST00000423014.2@TSTD1	ENST00000423014.2	protein_coding	161038880,161038551,161037913,161037631	161038990,161038673,161038075,161037826	Gene ID= ENSG00000215845.10 TPM= 1.93 Transcript Type= protein_coding
chr1	161037631	161038977	161037631	161038977	-	ENST00000368024.5@TSTD1	ENST00000368024.5	protein_coding	161038880,161037913,161037631	161038977,161038075,161037826	Gene ID= ENSG00000215845.10 TPM= 2.9 Transcript Type= protein_coding
chr1	161039251	161045976	161039251	161045976	-	transcript8018.chr1.nic@USF1	transcript8018.chr1.nic	protein_coding	161045858,161043268,161042833,161042555,161042116,161041651,161041324,161040814,161040202,161039251	161045976,161043360,161042882,161042670,161042217,161041846,161041411,161040872,161040670,161040009	Gene ID= ENSG00000158773.14 TPM= 4.34 Transcript Type= NA
chr1	161039251	161045977	161039251	161045977	-	ENST00000368021.7@USF1	ENST00000368021.7	protein_coding	161045858,161043268,161042833,161042555,161042116,161041651,161041324,161040814,161040576,161040202,161039251	161045977,161043360,161042882,161042670,161042217,161041846,161041411,161040872,161040670,161040330,161040009	Gene ID= ENSG00000158773.14 TPM= 45.85 Transcript Type= protein_coding
chr1	161098394	161100346	161098394	161100346	+	ENST00000368011.8@KLHDC9	ENST00000368011.8	protein_coding	161098394,161099346,161099598,161100061	161099062,161099505,161099796,161100346	Gene ID= ENSG00000162755.13 TPM= 2.9 Transcript Type= protein_coding
chr1	161100556	161118111	161100556	161118111	-	ENST00000368010.3@PFDN2	ENST00000368010.3	protein_coding	161117952,161102287,161102048,161100556	161118111,161102375,161102171,161100859	Gene ID= ENSG00000143256.4 TPM= 166.03 Transcript Type= protein_coding
chr1	161100556	161118055	161100556	161118055	-	ENST00000468311.1@PFDN2	ENST00000468311.1	protein_coding	161117952,161100556	161118055,161100859	Gene ID= ENSG00000143256.4 TPM= 6.76 Transcript Type= processed_transcript
chr1	161118075	161121067	161118075	161121067	+	transcript8024.chr1.nic@NIT1	transcript8024.chr1.nic	protein_coding	161118075,161118786,161119134,161119509,161119819,161120107,161120499	161118209,161118881,161119388,161119612,161119952,161120232,161121067	Gene ID= ENSG00000158793.13 TPM= 1.93 Transcript Type= NA
chr1	161118101	161121067	161118101	161121067	+	ENST00000368009.6@NIT1	ENST00000368009.6	protein_coding	161118101,161118786,161119134,161119509,161119819,161120107,161120499	161118178,161118881,161119388,161119612,161119952,161120232,161121067	Gene ID= ENSG00000158793.13 TPM= 15.44 Transcript Type= protein_coding
chr1	161118118	161121193	161118118	161121193	+	ENST00000392190.9@NIT1	ENST00000392190.9	protein_coding	161118118,161118786,161119134,161119509,161119819,161120107,161120499	161118225,161118881,161119388,161119612,161119952,161120232,161121193	Gene ID= ENSG00000158793.13 TPM= 1.93 Transcript Type= protein_coding
chr1	161118124	161121067	161118124	161121067	+	transcript8037.chr1.nic@NIT1	transcript8037.chr1.nic	protein_coding	161118124,161119134,161119819,161120107,161120499	161118881,161119612,161119952,161120232,161121067	Gene ID= ENSG00000158793.13 TPM= 1.93 Transcript Type= NA
chr1	161118118	161125445	161118118	161125445	+	ENST00000368008.5@NIT1	ENST00000368008.5	protein_coding	161118118,161118786,161119134,161119509,161119819,161120107,161124141	161118178,161118881,161119388,161119612,161119952,161120232,161125445	Gene ID= ENSG00000158793.13 TPM= 2.9 Transcript Type= protein_coding
chr1	161120974	161132668	161120974	161132668	-	ENST00000368006.7@DEDD	ENST00000368006.7	protein_coding	161132551,161130815,161124138,161123839,161123075,161120974	161132668,161130847,161124526,161123946,161123221,161122523	Gene ID= ENSG00000158796.16 TPM= 14.96 Transcript Type= protein_coding
chr1	161120977	161132688	161120977	161132688	-	ENST00000545495.5@DEDD	ENST00000545495.5	protein_coding	161132551,161124138,161123839,161123075,161120977	161132688,161124526,161123946,161123221,161122523	Gene ID= ENSG00000158796.16 TPM= 7.24 Transcript Type= protein_coding
chr1	161153752	161158856	161153752	161158856	+	ENST00000368003.5@UFC1	ENST00000368003.5	protein_coding	161153752,161156950,161157254,161157617,161158121,161158412	161154120,161157017,161157317,161157693,161158211,161158856	Gene ID= ENSG00000143222.11 TPM= 46.82 Transcript Type= protein_coding
chr1	161153983	161158856	161153983	161158856	+	transcript8045.chr1.nic@UFC1	transcript8045.chr1.nic	protein_coding	161153983,161156950,161157254,161157617,161158121,161158412	161154070,161157017,161157317,161157693,161158211,161158856	Gene ID= ENSG00000143222.11 TPM= 3.38 Transcript Type= NA
chr1	161159461	161165723	161159461	161165723	+	transcript8051.chr1.nic@USP21	transcript8051.chr1.nic	protein_coding	161159461,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357	161159678,161161240,161162097,161162390,161162726,161163074,161163619,161163922,161164250,161164612,161164942,161165143,161165723	Gene ID= ENSG00000143258.15 TPM= 5.63 Transcript Type= NA
chr1	161159461	161165723	161159461	161165723	+	transcript8056.chr1.nic@USP21	transcript8056.chr1.nic	protein_coding	161159461,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161165029,161165357	161159678,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164942,161165143,161165723	Gene ID= ENSG00000143258.15 TPM= 7.56 Transcript Type= NA
chr1	161159461	161165723	161159461	161165723	+	transcript8060.chr1.nic@USP21	transcript8060.chr1.nic	protein_coding	161159461,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164835,161165029,161165357	161159678,161161240,161162097,161162390,161162726,161163074,161163619,161164612,161164942,161165143,161165723	Gene ID= ENSG00000143258.15 TPM= 4.66 Transcript Type= NA
chr1	161159461	161165723	161159461	161165723	+	transcript8064.chr1.nic@USP21	transcript8064.chr1.nic	protein_coding	161159461,161160620,161162038,161162270,161162615,161162919,161163555,161163878	161159678,161161240,161162097,161162390,161162726,161163074,161163619,161165723	Gene ID= ENSG00000143258.15 TPM= 2.73 Transcript Type= NA
chr1	161159461	161165723	161159461	161165723	+	transcript8066.chr1.nic@USP21	transcript8066.chr1.nic	protein_coding	161159461,161160620,161162038,161162270,161163555	161159678,161161240,161162097,161163074,161165723	Gene ID= ENSG00000143258.15 TPM= 2.9 Transcript Type= NA
chr1	161159479	161165723	161159479	161165723	+	ENST00000289865.12@USP21	ENST00000289865.12	protein_coding	161159479,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357	161159678,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165723	Gene ID= ENSG00000143258.15 TPM= 31.21 Transcript Type= protein_coding
chr1	161159464	161165714	161159464	161165714	+	ENST00000368002.7@USP21	ENST00000368002.7	protein_coding	161159464,161160366,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357	161159678,161160506,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165714	Gene ID= ENSG00000143258.15 TPM= 5.15 Transcript Type= protein_coding
chr1	161171311	161177968	161171311	161177968	-	ENST00000622395.4@B4GALT3	ENST00000622395.4	protein_coding	161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171311	161177968,161176579,161176095,161175228,161174049,161173727,161172331,161172089	Gene ID= ENSG00000158850.14 TPM= 44.57 Transcript Type= protein_coding
chr1	161171310	161177526	161171310	161177526	-	transcript8075.chr1.nic@B4GALT3	transcript8075.chr1.nic	protein_coding	161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171310	161177526,161176579,161175893,161175228,161174049,161173727,161172331,161172089	Gene ID= ENSG00000158850.14 TPM= 4.03 Transcript Type= NA
chr1	161171310	161177485	161171310	161177485	-	ENST00000319769.9@B4GALT3	ENST00000319769.9	protein_coding	161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171310	161177485,161176579,161176074,161175228,161174049,161173727,161172331,161172089	Gene ID= ENSG00000158850.14 TPM= 40.71 Transcript Type= protein_coding
chr1	161199315	161214395	161199315	161214395	+	ENST00000367993.7@NDUFS2	ENST00000367993.7	protein_coding	161199315,161202147,161203437,161206407,161209193,161209483,161209857,161210111,161210304,161210591,161212351,161213380,161213649,161213864,161214156	161199523,161202480,161203543,161206597,161209313,161209595,161209931,161210188,161210389,161210710,161212480,161213475,161213732,161213921,161214395	Gene ID= ENSG00000158864.12 TPM= 384.19 Transcript Type= protein_coding
chr1	161202147	161214392	161202147	161214392	+	ENST00000392179.4@NDUFS2	ENST00000392179.4	protein_coding	161202147,161203437,161206407,161209193,161209483,161209857,161210111,161210304,161210591,161212351,161213380,161213649,161213864	161202480,161203543,161206597,161209313,161209595,161209931,161210188,161210389,161210710,161212480,161213475,161213732,161214392	Gene ID= ENSG00000158864.12 TPM= 2.9 Transcript Type= protein_coding
chr1	161215234	161219248	161215234	161219248	+	ENST00000490414.1@FCER1G	ENST00000490414.1	protein_coding	161215234,161218241,161218703,161218881	161215370,161218276,161218723,161219248	Gene ID= ENSG00000158869.10 TPM= 1.93 Transcript Type= processed_transcript
chr1	161215297	161219248	161215297	161219248	+	ENST00000289902.1@FCER1G	ENST00000289902.1	protein_coding	161215297,161217986,161218241,161218703,161218881	161215370,161218077,161218276,161218723,161219248	Gene ID= ENSG00000158869.10 TPM= 8.69 Transcript Type= protein_coding
chr1	161226003	161230607	161226003	161230607	+	ENST00000367988.7@TOMM40L	ENST00000367988.7	protein_coding	161226003,161226355,161226888,161227258,161227636,161227884,161228186,161228428,161228715,161228956	161226136,161226604,161226955,161227350,161227737,161227989,161228308,161228504,161228817,161230607	Gene ID= ENSG00000158882.14 TPM= 18.34 Transcript Type= protein_coding
chr1	161225939	161230744	161225939	161230744	+	ENST00000545897.5@TOMM40L	ENST00000545897.5	protein_coding	161225939,161226355,161226888,161227258,161227884,161228186,161228428,161228715,161228956	161226136,161226604,161226955,161227350,161227989,161228308,161228504,161228817,161230744	Gene ID= ENSG00000158882.14 TPM= 2.9 Transcript Type= protein_coding
chr1	161314257	161375340	161314257	161375340	+	ENST00000367975.6@SDHC	ENST00000367975.6	protein_coding	161314257,161323614,161328396,161340594,161356677,161362329	161314425,161323670,161328497,161340655,161356840,161375340	Gene ID= ENSG00000143252.14 TPM= 11.58 Transcript Type= protein_coding
chr1	161314381	161363189	161314381	161363189	+	ENST00000342751.8@SDHC	ENST00000342751.8	protein_coding	161314381,161323614,161328396,161340594,161362329	161314425,161323670,161328497,161340655,161363189	Gene ID= ENSG00000143252.14 TPM= 11.58 Transcript Type= protein_coding
chr1	161364611	161368301	161364611	161368301	+	transcript8125.chr1.nnic@NA	transcript8125.chr1.nnic	NA	161364611	161368301	Gene ID= novel_gene_chr1_8126 TPM= 5.79 Transcript Type= NA
chr1	161369479	161371242	161369479	161371242	+	transcript8123.chr1.nnic@NA	transcript8123.chr1.nnic	NA	161369479	161371242	Gene ID= novel_gene_chr1_8124 TPM= 1.93 Transcript Type= NA
chr1	161505430	161518558	161505430	161518558	+	ENST00000367972.8@FCGR2A	ENST00000367972.8	protein_coding	161505430,161505987,161506337,161509820,161510834,161513895,161517975	161505552,161506007,161506591,161510074,161510956,161513932,161518558	Gene ID= ENSG00000143226.13 TPM= 1.93 Transcript Type= protein_coding
chr1	161524540	161526910	161524540	161526910	+	ENST00000309758.5@HSPA6	ENST00000309758.5	protein_coding	161524540	161526910	Gene ID= ENSG00000173110.7 TPM= 12.55 Transcript Type= protein_coding
chr1	161541759	161550103	161541759	161550103	-	ENST00000367969.8@FCGR3A	ENST00000367969.8	protein_coding	161549697,161549011,161548421,161544701,161541759	161550103,161549031,161548678,161544958,161543199	Gene ID= ENSG00000203747.10 TPM= 4.83 Transcript Type= protein_coding
chr1	161663147	161678022	161663147	161678022	+	ENST00000236937.13@FCGR2B	ENST00000236937.13	protein_coding	161663147,161670252,161671392,161672975,161673960,161677328,161677476	161663353,161670272,161671649,161673229,161674073,161677365,161678022	Gene ID= ENSG00000072694.20 TPM= 2.9 Transcript Type= protein_coding
chr1	161749770	161757162	161749770	161757162	+	ENST00000367943.4@DUSP12	ENST00000367943.4	protein_coding	161749770,161751668,161751866,161752368,161753075,161756786	161750145,161751781,161751984,161752464,161753261,161757162	Gene ID= ENSG00000081721.11 TPM= 19.31 Transcript Type= protein_coding
chr1	161983192	162023854	161983192	162023854	-	ENST00000294794.7@OLFML2B	ENST00000294794.7	protein_coding	162023257,162019919,162017400,162006297,162000113,161997825,161984804,161983192	162023854,162020182,162017507,162006473,162000338,161998349,161984980,161984276	Gene ID= ENSG00000162745.10 TPM= 6.76 Transcript Type= protein_coding
chr1	162069750	162287419	162069750	162287419	+	transcript8157.chr1.nic@NOS1AP	transcript8157.chr1.nic	protein_coding	162069750,162154405,162287344	162070282,162154476,162287419	Gene ID= ENSG00000198929.12 TPM= 1.93 Transcript Type= NA
chr1	162497819	162524054	162497819	162524054	+	transcript8170.chr1.nnic@UHMK1	transcript8170.chr1.nnic	protein_coding	162497819,162499955,162500913,162503754,162512500,162512725,162518102,162522404	162498072,162500247,162501104,162503848,162512576,162512823,162518190,162524054	Gene ID= ENSG00000152332.15 TPM= 5.79 Transcript Type= NA
chr1	162561544	162599831	162561544	162599831	+	transcript8176.chr1.nnic@UAP1	transcript8176.chr1.nnic	protein_coding	162561544,162562473,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162592732,162597792,162599271	162561777,162562584,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162592782,162597858,162599831	Gene ID= ENSG00000117143.13 TPM= 6.92 Transcript Type= NA
chr1	162561506	162599842	162561506	162599842	+	ENST00000271469.7@UAP1	ENST00000271469.7	protein_coding	162561506,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162592732,162597792,162599271	162561777,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162592782,162597858,162599842	Gene ID= ENSG00000117143.13 TPM= 74.98 Transcript Type= protein_coding
chr1	162561533	162599837	162561533	162599837	+	ENST00000367926.8@UAP1	ENST00000367926.8	protein_coding	162561533,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162597792,162599271	162561777,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162597858,162599837	Gene ID= ENSG00000117143.13 TPM= 8.85 Transcript Type= protein_coding
chr1	163142304	163203113	163142304	163203113	-	ENST00000313961.9@RGS5	ENST00000313961.9	protein_coding	163202792,163168258,163161915,163152550,163142304	163203113,163168368,163161976,163152716,163147503	Gene ID= ENSG00000143248.12 TPM= 40.54 Transcript Type= protein_coding
chr1	164700512	164849890	164700512	164849890	+	transcript8191.chr1.nnic@PBX1	transcript8191.chr1.nnic	protein_coding	164700512,164782693,164792494,164799699,164807542,164811990,164820072,164821537,164846584	164700711,164782812,164792738,164799889,164807677,164812149,164820184,164821626,164849890	Gene ID= ENSG00000185630.18 TPM= 2.65 Transcript Type= NA
chr1	164700448	164849890	164700448	164849890	+	transcript8195.chr1.nnic@PBX1	transcript8195.chr1.nnic	protein_coding	164700448,164792494,164799699,164807542,164811990,164820072,164821537,164846584	164700711,164792738,164799889,164807677,164812149,164820184,164821626,164849890	Gene ID= ENSG00000185630.18 TPM= 2.97 Transcript Type= NA
chr1	164779437	164781003	164779437	164781003	-	transcript8198.chr1.nnic@NA	transcript8198.chr1.nnic	NA	164779437	164781003	Gene ID= novel_gene_chr1_8199 TPM= 1.93 Transcript Type= NA
chr1	165400917	165445196	165400917	165445196	-	ENST00000359842.9@RXRG	ENST00000359842.9	protein_coding	165444845,165428719,165419870,165417041,165410949,165410702,165409558,165408227,165406812,165400917	165445196,165428966,165420014,165417220,165411109,165410831,165409690,165408318,165406917,165401410	Gene ID= ENSG00000143171.12 TPM= 7.72 Transcript Type= protein_coding
chr1	165401113	165424985	165401113	165424985	-	transcript8203.chr1.nic@RXRG	transcript8203.chr1.nic	protein_coding	165424751,165419870,165417041,165410949,165410702,165409558,165408227,165406812,165401113	165424985,165420014,165417220,165411109,165410831,165409690,165408318,165406917,165401410	Gene ID= ENSG00000143171.12 TPM= 2.9 Transcript Type= NA
chr1	165631255	165655620	165631255	165655620	+	ENST00000367884.6@MGST3	ENST00000367884.6	protein_coding	165631255,165635727,165649841,165651014,165651978,165654279,165655368	165631292,165635822,165649964,165651087,165652035,165654351,165655620	Gene ID= ENSG00000143198.12 TPM= 5.31 Transcript Type= protein_coding
chr1	165630861	165655620	165630861	165655620	+	ENST00000367889.7@MGST3	ENST00000367889.7	protein_coding	165630861,165649841,165651014,165651978,165654279,165655368	165631293,165649964,165651087,165652035,165654351,165655620	Gene ID= ENSG00000143198.12 TPM= 163.94 Transcript Type= protein_coding
chr1	165662216	165698863	165662216	165698863	-	ENST00000354775.4@ALDH9A1	ENST00000354775.4	protein_coding	165698378,165695252,165682981,165682107,165680487,165679442,165669262,165668926,165667309,165665018,165662216	165698863,165695397,165683110,165682241,165680683,165679582,165669450,165669013,165667450,165665130,165663144	Gene ID= ENSG00000143149.12 TPM= 46.33 Transcript Type= protein_coding
chr1	165724293	165768922	165724293	165768922	-	ENST00000612311.4@TMCO1	ENST00000612311.4	protein_coding	165768682,165768192,165759525,165754228,165752102,165743167,165724293	165768922,165768269,165759584,165754274,165752169,165743311,165728121	Gene ID= ENSG00000143183.16 TPM= 2.9 Transcript Type= protein_coding
chr1	165727538	165768876	165727538	165768876	-	ENST00000464650.5@TMCO1	ENST00000464650.5	protein_coding	165768759,165768192,165759525,165754228,165752102,165743167,165727538	165768876,165768269,165759584,165754274,165752169,165743311,165728121	Gene ID= ENSG00000143183.16 TPM= 1.93 Transcript Type= protein_coding
chr1	165902595	165911618	165902595	165911618	+	ENST00000479872.5@UCK2	ENST00000479872.5	protein_coding	165902595,165905921,165907684	165903279,165905969,165911618	Gene ID= ENSG00000143179.14 TPM= 25.1 Transcript Type= retained_intron
chr1	165827531	165908109	165827531	165908109	+	ENST00000367879.8@UCK2	ENST00000367879.8	protein_coding	165827531,165890204,165891226,165896190,165903182,165905921,165907684	165827932,165890363,165891322,165896332,165903279,165905969,165908109	Gene ID= ENSG00000143179.14 TPM= 12.55 Transcript Type= protein_coding
chr1	166839488	166854471	166839488	166854471	+	transcript8241.chr1.nic@POGK	transcript8241.chr1.nic	protein_coding	166839488,166840955,166846612,166847494,166848938,166852585	166839769,166841088,166846738,166847592,166850423,166854471	Gene ID= ENSG00000143157.11 TPM= 9.65 Transcript Type= NA
chr1	166856510	166876327	166856510	166876327	-	ENST00000367874.4@TADA1	ENST00000367874.4	protein_coding	166876160,166869763,166869445,166863824,166862203,166860186,166858119,166856510	166876327,166869854,166869510,166863921,166862412,166860337,166858281,166857719	Gene ID= ENSG00000152382.5 TPM= 32.82 Transcript Type= protein_coding
chr1	167094045	167129129	167094045	167129129	+	ENST00000361200.6@DUSP27	ENST00000361200.6	protein_coding	167094045,167094834,167113710,167117328,167119249,167125787	167094194,167094959,167113804,167117559,167119466,167129129	Gene ID= ENSG00000198842.9 TPM= 316.46 Transcript Type= protein_coding
chr1	167219831	167222322	167219831	167222322	-	transcript8262.chr1.nnic@NA	transcript8262.chr1.nnic	NA	167219831	167222322	Gene ID= novel_gene_chr1_8263 TPM= 2.9 Transcript Type= NA
chr1	167220829	167427345	167220829	167427345	+	ENST00000367866.6@POU2F1	ENST00000367866.6	protein_coding	167220829,167332470,167365467,167370161,167371917,167374108,167376029,167383857,167389588,167396286,167397994,167399186,167401451,167411959,167413026,167415500	167220958,167332535,167365567,167370214,167372036,167374296,167376155,167383951,167389761,167396427,167398133,167399365,167401556,167412304,167413114,167427345	Gene ID= ENSG00000143190.21 TPM= 1.93 Transcript Type= protein_coding
chr1	167455051	167464171	167455051	167464171	+	transcript8267.chr1.nnic@NA	transcript8267.chr1.nnic	NA	167455051,167457005,167457369,167463595	167455198,167457117,167457521,167464171	Gene ID= novel_gene_chr1_8268 TPM= 1.93 Transcript Type= NA
chr1	167455051	167478832	167455051	167478832	+	transcript8270.chr1.nnic@NA	transcript8270.chr1.nnic	NA	167455051,167457005,167457369,167478231	167455198,167457117,167457521,167478832	Gene ID= novel_gene_chr1_8271 TPM= 1.93 Transcript Type= NA
chr1	167529007	167553435	167529007	167553435	-	transcript8275.chr1.nnic@CREG1	transcript8275.chr1.nnic	protein_coding	167553388,167548002,167546101,167529007	167553435,167548121,167546285,167530255	Gene ID= ENSG00000143162.7 TPM= 1.93 Transcript Type= NA
chr1	167541013	167553767	167541013	167553767	-	ENST00000370509.4@CREG1	ENST00000370509.4	protein_coding	167553388,167548002,167546101,167541013	167553767,167548121,167546285,167542301	Gene ID= ENSG00000143162.7 TPM= 83.98 Transcript Type= protein_coding
chr1	167630093	167706249	167630093	167706249	+	ENST00000367854.7@RCSD1	ENST00000367854.7	protein_coding	167630093,167683900,167685421,167690049,167694099,167697099,167704664	167630429,167684001,167685510,167690120,167694302,167697842,167706249	Gene ID= ENSG00000198771.10 TPM= 55.99 Transcript Type= protein_coding
chr1	167630093	167706248	167630093	167706248	+	ENST00000537350.5@RCSD1	ENST00000537350.5	protein_coding	167630093,167683900,167690049,167694099,167697099,167704664	167630429,167684001,167690120,167694302,167697842,167706248	Gene ID= ENSG00000198771.10 TPM= 3.86 Transcript Type= protein_coding
chr1	167721973	167790158	167721973	167790158	+	transcript8289.chr1.nnic@MPZL1	transcript8289.chr1.nnic	protein_coding	167721973,167765583,167772275,167773236,167774213,167774749,167776064,167787820	167722242,167765749,167772488,167773368,167774252,167774847,167776166,167790158	Gene ID= ENSG00000197965.11 TPM= 1.93 Transcript Type= NA
chr1	167721950	167791919	167721950	167791919	+	ENST00000359523.6@MPZL1	ENST00000359523.6	protein_coding	167721950,167765583,167772275,167773236,167776064,167787820	167722242,167765749,167772488,167773368,167776166,167791919	Gene ID= ENSG00000197965.11 TPM= 1.93 Transcript Type= protein_coding
chr1	167916729	167936040	167916729	167936040	-	ENST00000367846.8@MPC2	ENST00000367846.8	protein_coding	167935733,167924497,167920547,167919979,167916729	167936040,167924537,167920631,167920090,167918359	Gene ID= ENSG00000143158.10 TPM= 31.86 Transcript Type= protein_coding
chr1	167936577	168063659	167936577	168063659	+	transcript8327.chr1.nic@DCAF6	transcript8327.chr1.nic	protein_coding	167936577,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168015781,168022988,168038371,168043025,168044585,168044900,168050892,168063621	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168015951,168023047,168038488,168043140,168044671,168045227,168050933,168063659	Gene ID= ENSG00000143164.15 TPM= 50.79 Transcript Type= NA
chr1	167936637	168063659	167936637	168063659	+	transcript8335.chr1.nic@DCAF6	transcript8335.chr1.nic	protein_coding	167936637,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168015781,168022988,168038371,168043025,168044585,168044900,168063621	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168015951,168023047,168038488,168043140,168044671,168045227,168063659	Gene ID= ENSG00000143164.15 TPM= 61.55 Transcript Type= NA
chr1	167936661	168075843	167936661	168075843	+	ENST00000367843.7@DCAF6	ENST00000367843.7	protein_coding	167936661,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168022988,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168023047,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075843	Gene ID= ENSG00000143164.15 TPM= 6.16 Transcript Type= protein_coding
chr1	167936708	168075834	167936708	168075834	+	ENST00000312263.10@DCAF6	ENST00000312263.10	protein_coding	167936708,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075834	Gene ID= ENSG00000143164.15 TPM= 34.6 Transcript Type= protein_coding
chr1	167936818	168075834	167936818	168075834	+	ENST00000367840.3@DCAF6	ENST00000367840.3	protein_coding	167936818,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168015781,168022988,168038371,168043025,168044585,168044900,168050892,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168015951,168023047,168038488,168043140,168044671,168045227,168050933,168063759,168065746,168066465,168068463,168075834	Gene ID= ENSG00000143164.15 TPM= 27.57 Transcript Type= protein_coding
chr1	168055901	168056422	168055901	168056422	-	ENST00000443090.1@GCSHP5	ENST00000443090.1	processed_pseudogene	168055901	168056422	Gene ID= ENSG00000224837.1 TPM= 1.93 Transcript Type= processed_pseudogene
chr1	168178905	168179676	168178905	168179676	+	transcript8365.chr1.nnic@NA	transcript8365.chr1.nnic	NA	168178905	168179676	Gene ID= novel_gene_chr1_8366 TPM= 1.93 Transcript Type= NA
chr1	168178985	168200204	168178985	168200204	+	transcript8361.chr1.nnic@TIPRL	transcript8361.chr1.nnic	protein_coding	168178985,168183902,168184779,168191369,168196547,168198919,168199225	168179181,168184081,168184878,168191500,168196642,168198981,168200204	Gene ID= ENSG00000143155.12 TPM= 2.9 Transcript Type= NA
chr1	168178933	168202114	168178933	168202114	+	ENST00000367833.6@TIPRL	ENST00000367833.6	protein_coding	168178933,168183902,168184779,168191369,168196547,168198919,168199903	168179181,168184081,168184878,168191500,168196642,168198981,168202114	Gene ID= ENSG00000143155.12 TPM= 38.61 Transcript Type= protein_coding
chr1	168226008	168253025	168226008	168253025	+	ENST00000271375.6@SFT2D2	ENST00000271375.6	protein_coding	168226008,168231514,168231834,168235101,168236589,168236712,168239131,168242501	168226142,168231600,168231919,168235182,168236624,168236770,168239160,168253025	Gene ID= ENSG00000213064.9 TPM= 21.24 Transcript Type= protein_coding
chr1	168245565	168247343	168245565	168247343	-	ENST00000358576.4@ANKRD36BP1	ENST00000358576.4	transcribed_processed_pseudogene	168245565	168247343	Gene ID= ENSG00000214262.4 TPM= 53.09 Transcript Type= processed_transcript
chr1	168695459	168729264	168695459	168729264	-	ENST00000367817.3@DPT	ENST00000367817.3	protein_coding	168728870,168714221,168701017,168695459	168729264,168714346,168701124,168696615	Gene ID= ENSG00000143196.4 TPM= 29.92 Transcript Type= protein_coding
chr1	169106323	169132019	169106323	169132019	+	ENST00000367815.8@ATP1B1	ENST00000367815.8	protein_coding	169106323,169111370,169124884,169127224,169130010,169131292	169106926,169111498,169125039,169127408,169130090,169132019	Gene ID= ENSG00000143153.12 TPM= 11.1 Transcript Type= protein_coding
chr1	169112511	169132722	169112511	169132722	+	transcript8385.chr1.nnic@ATP1B1	transcript8385.chr1.nnic	protein_coding	169112511,169124884,169127224,169130010,169131292	169112777,169125039,169127408,169130090,169132722	Gene ID= ENSG00000143153.12 TPM= 82.53 Transcript Type= NA
chr1	169107760	169110252	169107760	169110252	-	transcript8386.chr1.nnic@NA	transcript8386.chr1.nnic	NA	169107760	169110252	Gene ID= novel_gene_chr1_8387 TPM= 9.65 Transcript Type= NA
chr1	169110569	169113900	169110569	169113900	-	transcript8390.chr1.nnic@NA	transcript8390.chr1.nnic	NA	169110569	169113900	Gene ID= novel_gene_chr1_8391 TPM= 14.48 Transcript Type= NA
chr1	169122748	169123034	169122748	169123034	-	transcript8388.chr1.nnic@NA	transcript8388.chr1.nnic	NA	169122748	169123034	Gene ID= novel_gene_chr1_8389 TPM= 8.69 Transcript Type= NA
chr1	169367970	169388305	169367970	169388305	+	ENST00000367808.7@BLZF1	ENST00000367808.7	protein_coding	169367970,169369473,169376540,169378330,169380481,169382062,169386997	169368342,169369550,169376979,169378529,169380609,169382281,169388305	Gene ID= ENSG00000117475.13 TPM= 4.83 Transcript Type= protein_coding
chr1	169368186	169388301	169368186	169388301	+	transcript8396.chr1.nnic@BLZF1	transcript8396.chr1.nnic	protein_coding	169368186,169369473,169376540,169378330,169380481,169386997	169368342,169369550,169376979,169378529,169380609,169388301	Gene ID= ENSG00000117475.13 TPM= 7.72 Transcript Type= NA
chr1	169368186	169381761	169368186	169381761	+	transcript8397.chr1.nic@BLZF1	transcript8397.chr1.nic	protein_coding	169368186,169369473,169376540,169378330,169380481	169368342,169369550,169376979,169378529,169381761	Gene ID= ENSG00000117475.13 TPM= 1.93 Transcript Type= NA
chr1	169463909	169486003	169463909	169486003	-	ENST00000236137.9@SLC19A2	ENST00000236137.9	protein_coding	169485563,169477155,169469964,169468644,169468111,169463909	169486003,169477757,169470186,169468836,169468252,169465977	Gene ID= ENSG00000117479.12 TPM= 235.7 Transcript Type= protein_coding
chr1	169463929	169486293	169463929	169486293	-	transcript8408.chr1.nnic@SLC19A2	transcript8408.chr1.nnic	protein_coding	169486053,169477155,169469964,169468644,169468111,169463929	169486293,169477757,169470186,169468836,169468252,169465977	Gene ID= ENSG00000117479.12 TPM= 44.33 Transcript Type= NA
chr1	169463929	169485931	169463929	169485931	-	ENST00000367804.4@SLC19A2	ENST00000367804.4	protein_coding	169485563,169469964,169468644,169468111,169463929	169485931,169470186,169468836,169468252,169465977	Gene ID= ENSG00000117479.12 TPM= 5.23 Transcript Type= protein_coding
chr1	169588849	169630134	169588849	169630134	-	transcript8422.chr1.nic@SELP	transcript8422.chr1.nic	protein_coding	169630072,169619129,169617028,169613586,169612929,169612217,169611492,169609504,169606949,169603026,169596991,169595925,169594692,169593605,169591426,169590147,169588849	169630134,169619219,169617414,169613693,169613114,169612402,169611677,169609689,169607134,169603211,169597176,169596134,169594877,169593724,169591456,169590202,169589565	Gene ID= ENSG00000174175.16 TPM= 1.93 Transcript Type= NA
chr1	169792529	169794966	169792529	169794966	-	ENST00000310392.4@METTL18	ENST00000310392.4	protein_coding	169794815,169792529	169794966,169793897	Gene ID= ENSG00000171806.11 TPM= 3.86 Transcript Type= protein_coding
chr1	169853074	169893959	169853074	169893959	-	ENST00000367772.8@SCYL3	ENST00000367772.8	protein_coding	169893788,169888676,169878634,169875978,169873696,169870255,169868928,169866896,169864369,169862613,169859041,169855796,169854270,169853074	169893959,169888890,169878819,169876091,169873752,169870357,169869039,169866973,169864508,169862797,169859212,169855957,169854964,169853772	Gene ID= ENSG00000000457.13 TPM= 2.9 Transcript Type= protein_coding
chr1	169921332	170074707	169921332	170074707	-	transcript8435.chr1.nnic@KIFAP3	transcript8435.chr1.nnic	protein_coding	170074436,170055305,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169925787,169921332	170074707,170055436,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169925855,169921781	Gene ID= ENSG00000075945.12 TPM= 26.06 Transcript Type= NA
chr1	169921331	170074738	169921331	170074738	-	ENST00000538366.5@KIFAP3	ENST00000538366.5	protein_coding	170074436,170055305,170046712,170041677,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169921331	170074738,170055436,170046866,170041840,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169921781	Gene ID= ENSG00000075945.12 TPM= 1.28 Transcript Type= protein_coding
chr1	169921326	170074695	169921326	170074695	-	ENST00000361580.6@KIFAP3	ENST00000361580.6	protein_coding	170074436,170055305,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169921326	170074695,170055436,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169921781	Gene ID= ENSG00000075945.12 TPM= 24.45 Transcript Type= protein_coding
chr1	169921326	170074588	169921326	170074588	-	ENST00000367767.5@KIFAP3	ENST00000367767.5	protein_coding	170074436,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169921326	170074588,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169921781	Gene ID= ENSG00000075945.12 TPM= 1.28 Transcript Type= protein_coding
chr1	171185198	171211228	171185198	171211228	+	transcript8455.chr1.nnic@FMO2	transcript8455.chr1.nnic	protein_coding	171185198,171185708,171193335,171196649,171199346,171203865,171205279,171207718,171208794,171210800	171185359,171185845,171193523,171196811,171199488,171204064,171205634,171207790,171210717,171211228	Gene ID= ENSG00000094963.13 TPM= 7.72 Transcript Type= NA
chr1	171485508	171532775	171485508	171532775	+	transcript8464.chr1.nic@PRRC2C	transcript8464.chr1.nic	protein_coding	171485508,171512032,171512995,171514536,171515734,171517591,171522177,171523221,171523435,171524821,171527791,171532343	171485735,171512200,171513172,171514645,171515859,171517814,171522259,171523354,171523522,171524965,171527844,171532775	Gene ID= ENSG00000117523.15 TPM= 23.65 Transcript Type= NA
chr1	171485551	171532792	171485551	171532792	+	ENST00000476522.5@PRRC2C	ENST00000476522.5	protein_coding	171485551,171512032,171512995,171514536,171515734,171517591,171522177,171523221,171523435,171524821,171527791,171532343	171485735,171512200,171513172,171514630,171515859,171517814,171522259,171523354,171523522,171524965,171527844,171532792	Gene ID= ENSG00000117523.15 TPM= 30.41 Transcript Type= processed_transcript
chr1	171635417	171652683	171635417	171652683	-	ENST00000037502.10@MYOC	ENST00000037502.10	protein_coding	171652008,171638597,171635417	171652683,171638722,171636709	Gene ID= ENSG00000034971.16 TPM= 18.34 Transcript Type= protein_coding
chr1	171700160	171742088	171700160	171742088	-	transcript8479.chr1.nic@VAMP4	transcript8479.chr1.nic	protein_coding	171741910,171738349,171728524,171719171,171710760,171709665,171706367,171704387,171700160	171742088,171738463,171728570,171719221,171710814,171709744,171706418,171704534,171702084	Gene ID= ENSG00000117533.14 TPM= 2.9 Transcript Type= NA
chr1	171700160	171742088	171700160	171742088	-	transcript8480.chr1.nnic@VAMP4	transcript8480.chr1.nnic	protein_coding	171741910,171738349,171728524,171719171,171710714,171709665,171706367,171704387,171700160	171742088,171738463,171728570,171719221,171710814,171709800,171706418,171704534,171702084	Gene ID= ENSG00000117533.14 TPM= 2.9 Transcript Type= NA
chr1	171700160	171742247	171700160	171742247	-	ENST00000236192.11@VAMP4	ENST00000236192.11	protein_coding	171741910,171738349,171728524,171719171,171710714,171709665,171706367,171700160	171742247,171738463,171728570,171719221,171710814,171709744,171706418,171704534	Gene ID= ENSG00000117533.14 TPM= 9.65 Transcript Type= protein_coding
chr1	171781632	171796959	171781632	171796959	+	transcript8500.chr1.nic@METTL13	transcript8500.chr1.nic	protein_coding	171781632,171783740,171785879,171787735,171792017,171794396,171796482	171782120,171784499,171786078,171787930,171792235,171794527,171796959	Gene ID= ENSG00000010165.19 TPM= 5.79 Transcript Type= NA
chr1	171781702	171797717	171781702	171797717	+	ENST00000361735.3@METTL13	ENST00000361735.3	protein_coding	171781702,171783740,171785879,171787735,171790452,171792017,171794396,171796482	171782120,171784499,171786078,171787930,171790616,171792235,171794527,171797717	Gene ID= ENSG00000010165.19 TPM= 2.9 Transcript Type= protein_coding
chr1	172393133	172444103	172393133	172444103	-	transcript8506.chr1.nnic@PIGC	transcript8506.chr1.nnic	protein_coding	172443988,172415294,172399819,172393133	172444103,172415374,172399916,172394410	Gene ID= ENSG00000135845.9 TPM= 1.93 Transcript Type= NA
chr1	172392865	172444140	172392865	172444140	-	transcript8508.chr1.nnic@PIGC	transcript8508.chr1.nnic	protein_coding	172443988,172399819,172392865	172444140,172399916,172394410	Gene ID= ENSG00000135845.9 TPM= 1.93 Transcript Type= NA
chr1	172441457	172444060	172441457	172444060	-	ENST00000344529.4@PIGC	ENST00000344529.4	protein_coding	172443988,172441457	172444060,172442830	Gene ID= ENSG00000135845.9 TPM= 23.17 Transcript Type= protein_coding
chr1	172533158	172611831	172533158	172611831	+	transcript8514.chr1.nic@SUCO	transcript8514.chr1.nic	protein_coding	172533158,172551512,172555869,172557280,172557644,172569019,172570047,172570663,172573891,172575518,172577539,172577764,172578298,172579202,172585018,172585858,172588760,172590984,172600064,172602064,172602696,172608747,172609816	172533497,172551626,172556023,172557417,172557794,172569142,172570171,172570730,172573998,172575623,172577559,172577819,172578389,172579267,172585086,172585948,172589926,172591071,172600168,172602218,172602787,172608802,172611831	Gene ID= ENSG00000094975.13 TPM= 1.93 Transcript Type= NA
chr1	173417793	173477658	173417793	173477658	-	transcript8529.chr1.nnic@AL645568.1	transcript8529.chr1.nnic	antisense_RNA	173477355,173462324,173417793	173477658,173462454,173418622	Gene ID= ENSG00000203739.3 TPM= 1.93 Transcript Type= NA
chr1	173423844	173477759	173423844	173477759	-	transcript8531.chr1.nnic@AL645568.1	transcript8531.chr1.nnic	antisense_RNA	173477355,173462324,173423844	173477759,173462454,173423974	Gene ID= ENSG00000203739.3 TPM= 1.93 Transcript Type= NA
chr1	173477266	173488807	173477266	173488807	+	ENST00000340385.5@PRDX6	ENST00000340385.5	protein_coding	173477266,173481326,173485361,173486255,173487735	173477492,173481482,173485507,173486401,173488807	Gene ID= ENSG00000117592.8 TPM= 557.95 Transcript Type= protein_coding
chr1	173714952	173785513	173714952	173785513	+	transcript8535.chr1.nic@KLHL20	transcript8535.chr1.nic	protein_coding	173714952,173715523,173716003,173733713,173751764,173753213,173755923,173756976,173766146,173774305,173775634,173782124,173785163	173715078,173715654,173716066,173734286,173751922,173753307,173756038,173757159,173766289,173774438,173775842,173782230,173785513	Gene ID= ENSG00000076321.10 TPM= 2.9 Transcript Type= NA
chr1	173715038	173785513	173715038	173785513	+	transcript8541.chr1.nnic@KLHL20	transcript8541.chr1.nnic	protein_coding	173715038,173716003,173733713,173751764,173753213,173755923,173756976,173774305,173775634,173782124,173785163	173715078,173716066,173734286,173751922,173753307,173756038,173757159,173774438,173775842,173782230,173785513	Gene ID= ENSG00000076321.10 TPM= 1.93 Transcript Type= NA
chr1	173824503	173858546	173824503	173858546	+	ENST00000361951.4@DARS2	ENST00000361951.4	protein_coding	173824503,173826687,173828333,173830660,173831535,173833376,173834473,173836940,173838190,173839367,173840866,173845229,173850327,173853349,173853795,173856666,173857518	173825356,173826786,173828399,173830761,173831630,173833499,173834519,173837046,173838259,173839546,173840973,173845291,173850479,173853567,173853905,173856741,173858546	Gene ID= ENSG00000117593.9 TPM= 3.86 Transcript Type= protein_coding
chr1	173863901	173867987	173863901	173867987	-	ENST00000450589.5@GAS5	ENST00000450589.5	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865471,173865229,173864675,173864484,173864257,173863901	173867987,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864506,173864304,173864075	Gene ID= ENSG00000234741.7 TPM= 31.37 Transcript Type= lincRNA
chr1	173863901	173867991	173863901	173867991	-	transcript8556.chr1.nic@GAS5	transcript8556.chr1.nic	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865510,173865229,173864675,173864484,173864257,173863901	173867991,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864506,173864304,173864075	Gene ID= ENSG00000234741.7 TPM= 19.79 Transcript Type= NA
chr1	173863901	173867991	173863901	173867991	-	transcript8566.chr1.nic@GAS5	transcript8566.chr1.nic	processed_transcript	173867960,173866991,173866528,173863901	173867991,173867043,173866796,173866206	Gene ID= ENSG00000234741.7 TPM= 1.93 Transcript Type= NA
chr1	173993079	174022386	173993079	174022386	-	transcript8575.chr1.nic@RC3H1	transcript8575.chr1.nic	protein_coding	174022096,173993079	174022386,173993135	Gene ID= ENSG00000135870.11 TPM= 6.76 Transcript Type= NA
chr1	174159514	174319514	174159514	174319514	+	transcript8577.chr1.nnic@RABGAP1L	transcript8577.chr1.nnic	protein_coding	174159514,174219125,174220972,174231145,174241483,174250475,174252480,174252740,174272414,174275833,174278613,174304986,174319154	174159657,174219295,174221164,174231355,174241657,174250632,174252590,174252773,174272480,174275935,174278779,174305127,174319514	Gene ID= ENSG00000152061.23 TPM= 1.93 Transcript Type= NA
chr1	174159514	174319514	174159514	174319514	+	transcript8578.chr1.nnic@RABGAP1L	transcript8578.chr1.nnic	protein_coding	174159514,174219125,174220972,174231145,174241483,174250475,174252480,174272414,174275833,174278613,174304986,174319154	174159657,174219184,174221164,174231355,174241657,174250632,174252590,174272480,174275935,174278779,174305127,174319514	Gene ID= ENSG00000152061.23 TPM= 1.93 Transcript Type= NA
chr1	174999733	175011710	174999733	175011710	+	ENST00000367679.6@CACYBP	ENST00000367679.6	protein_coding	174999733,175004614,175006745,175007098,175008609,175009923	175000195,175004833,175006841,175007197,175008706,175011710	Gene ID= ENSG00000116161.17 TPM= 1.93 Transcript Type= protein_coding
chr1	175018234	175023434	175018234	175023434	-	transcript8598.chr1.nic@MRPS14	transcript8598.chr1.nic	protein_coding	175023364,175018234	175023434,175018576	Gene ID= ENSG00000120333.4 TPM= 4.83 Transcript Type= NA
chr1	175018289	175023434	175018289	175023434	-	transcript8599.chr1.nic@MRPS14	transcript8599.chr1.nic	protein_coding	175023364,175018289	175023434,175018576	Gene ID= ENSG00000120333.4 TPM= 1.93 Transcript Type= NA
chr1	175012958	175023425	175012958	175023425	-	ENST00000476371.1@MRPS14	ENST00000476371.1	protein_coding	175023364,175018418,175012958	175023425,175018576,175014851	Gene ID= ENSG00000120333.4 TPM= 4.83 Transcript Type= protein_coding
chr1	175156987	175192793	175156987	175192793	-	ENST00000423313.5@KIAA0040	ENST00000423313.5	protein_coding	175192640,175177611,175166562,175156987	175192793,175177684,175166737,175161146	Gene ID= ENSG00000235750.9 TPM= 7.72 Transcript Type= protein_coding
chr1	175944831	176207271	175944831	176207271	-	transcript8603.chr1.nnic@RFWD2	transcript8603.chr1.nnic	protein_coding	176206572,176184633,176175910,176163815,176162869,176149006,176136488,176135010,176116624,176100245,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944831	176207271,176184692,176176007,176163891,176162988,176149074,176136547,176135086,176116681,176100361,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170	Gene ID= ENSG00000143207.19 TPM= 1.93 Transcript Type= NA
chr1	175944831	176207493	175944831	176207493	-	ENST00000367669.7@RFWD2	ENST00000367669.7	protein_coding	176206572,176184633,176175910,176163815,176162869,176149006,176136488,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944831	176207493,176184692,176176007,176163891,176162988,176149074,176136547,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170	Gene ID= ENSG00000143207.19 TPM= 48.27 Transcript Type= protein_coding
chr1	175944831	176207289	175944831	176207289	-	transcript8611.chr1.nic@RFWD2	transcript8611.chr1.nic	protein_coding	176206572,176184633,176163815,176162869,176149006,176136488,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944831	176207289,176184692,176163891,176162988,176149074,176136547,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170	Gene ID= ENSG00000143207.19 TPM= 4.83 Transcript Type= NA
chr1	175944831	176207293	175944831	176207293	-	transcript8612.chr1.nic@RFWD2	transcript8612.chr1.nic	protein_coding	176206572,176184633,176175910,176163815,176162869,176149006,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944831	176207293,176184692,176176007,176163891,176162988,176149074,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170	Gene ID= ENSG00000143207.19 TPM= 10.62 Transcript Type= NA
chr1	178093763	178442913	178093763	178442913	+	transcript8623.chr1.nic@RASAL2	transcript8623.chr1.nic	protein_coding	178093763,178283564,178299992,178390100,178420511,178439422,178441549,178442675	178094694,178283691,178300118,178390206,178420620,178439575,178441647,178442913	Gene ID= ENSG00000075391.16 TPM= 9.65 Transcript Type= NA
chr1	178725165	178920103	178725165	178920103	+	ENST00000367635.7@RALGPS2	ENST00000367635.7	protein_coding	178725165,178776682,178784418,178785557,178808045,178811315,178821612,178833424,178877498,178878902,178883466,178885076,178885969,178889642,178892230,178893919,178897664,178902106,178906776,178916330	178725419,178776821,178784522,178785607,178808128,178811404,178821704,178833550,178877635,178878992,178883533,178885211,178886120,178889696,178892307,178894024,178897756,178902211,178906867,178920103	Gene ID= ENSG00000116191.17 TPM= 1.93 Transcript Type= protein_coding
chr1	178849705	178871052	178849705	178871052	-	ENST00000234816.6@ANGPTL1	ENST00000234816.6	protein_coding	178870741,178869114,178864954,178853594,178852683,178849705	178871052,178869223,178865802,178853787,178852953,178851316	Gene ID= ENSG00000116194.12 TPM= 2.9 Transcript Type= protein_coding
chr1	178849705	178869342	178849705	178869342	-	transcript8633.chr1.nic@ANGPTL1	transcript8633.chr1.nic	protein_coding	178869114,178864954,178853594,178852683,178849705	178869342,178865802,178853787,178852953,178851316	Gene ID= ENSG00000116194.12 TPM= 5.79 Transcript Type= NA
chr1	179025896	179076562	179025896	179076562	+	ENST00000263733.4@FAM20B	ENST00000263733.4	protein_coding	179025896,179043715,179050279,179054529,179063927,179064305,179066800,179071913	179026098,179044224,179050365,179054638,179064098,179064496,179066859,179076562	Gene ID= ENSG00000116199.11 TPM= 13.51 Transcript Type= protein_coding
chr1	179081984	179095996	179081984	179095996	+	transcript8645.chr1.nnic@TOR3A	transcript8645.chr1.nnic	protein_coding	179081984,179082940,179085628,179087911,179094093,179094968	179082335,179083053,179085893,179088089,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 12.07 Transcript Type= NA
chr1	179081377	179095996	179081377	179095996	+	ENST00000367627.7@TOR3A	ENST00000367627.7	protein_coding	179081377,179082940,179085628,179087911,179094093,179094968	179082387,179083053,179085893,179088089,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 117.29 Transcript Type= protein_coding
chr1	179082006	179095996	179082006	179095996	+	transcript8648.chr1.nic@TOR3A	transcript8648.chr1.nic	protein_coding	179082006,179082940,179087911,179094093,179094968	179082387,179083053,179088089,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 6.76 Transcript Type= NA
chr1	179844821	179877806	179844821	179877806	-	transcript8660.chr1.nnic@TOR1AIP2	transcript8660.chr1.nnic	protein_coding	179877693,179877239,179865436,179856058,179852632,179850845,179847535,179844821	179877806,179877373,179865854,179856170,179852811,179851363,179847636,179846828	Gene ID= ENSG00000169905.12 TPM= 1.93 Transcript Type= NA
chr1	179840918	179843183	179840918	179843183	-	transcript8670.chr1.nnic@NA	transcript8670.chr1.nnic	NA	179840918	179843183	Gene ID= novel_gene_chr1_8671 TPM= 8.69 Transcript Type= NA
chr1	179881607	179882595	179881607	179882595	-	ENST00000610272.1@AL353708.3	ENST00000610272.1	lincRNA	179881607	179882595	Gene ID= ENSG00000272906.1 TPM= 5.79 Transcript Type= lincRNA
chr1	179882042	179919708	179882042	179919708	+	ENST00000528443.6@TOR1AIP1	ENST00000528443.6	protein_coding	179882042,179884692,179889310,179900126,179901302,179903966,179907823,179908605,179913998,179917452	179882977,179884769,179889369,179900167,179901388,179904022,179907864,179908673,179914054,179919708	Gene ID= ENSG00000143337.18 TPM= 7.72 Transcript Type= protein_coding
chr1	179954780	180092870	179954780	180092870	+	transcript8675.chr1.nnic@CEP350	transcript8675.chr1.nnic	protein_coding	179954780,179986169,179987243,179990507,179992062,179996553,180003174,180006454,180011929,180013847,180015849,180019949,180022698,180024431,180031320,180033862,180036926,180041138,180041662,180043056,180044051,180048536,180052970,180053750,180054415,180062220,180065115,180073786,180075022,180078463,180080517,180084018,180087578,180090714,180092614	179955142,179986254,179987286,179990621,179992221,179997175,180003287,180006567,180012075,180014505,180015970,180021009,180022848,180024582,180031494,180034082,180037089,180041248,180041802,180043192,180044173,180048705,180053166,180053934,180054502,180062366,180065272,180073908,180075221,180078674,180080661,180084178,180087717,180090796,180092870	Gene ID= ENSG00000135837.15 TPM= 8.69 Transcript Type= NA
chr1	179954757	180024547	179954757	180024547	+	transcript8682.chr1.nnic@CEP350	transcript8682.chr1.nnic	protein_coding	179954757,179985172,179986169,179987243,179990507,179992062,179996553,180003174,180006454,180011929,180013847,180015849,180019949,180022698,180024419	179955142,179985232,179986254,179987286,179990621,179992221,179997175,180003287,180006567,180012075,180014505,180015970,180021009,180022848,180024547	Gene ID= ENSG00000135837.15 TPM= 1.93 Transcript Type= NA
chr1	179954738	180114880	179954738	180114880	+	ENST00000367607.7@CEP350	ENST00000367607.7	protein_coding	179954738,179986169,179987240,179990507,179992062,179996553,180003174,180006454,180011929,180013847,180015849,180019949,180022698,180024419,180031320,180033862,180036926,180041138,180041662,180043056,180044051,180048536,180052970,180053750,180054415,180062220,180065115,180075022,180078463,180080517,180084018,180087578,180090714,180092614,180095523,180096038,180098863,180110997	179955142,179986254,179987286,179990621,179992221,179997175,180003287,180006567,180012075,180014505,180015970,180021009,180022848,180024582,180031494,180034082,180037089,180041248,180041802,180043192,180044173,180048705,180053166,180053934,180054502,180062366,180065272,180075221,180078674,180080661,180084178,180087717,180090796,180094616,180095930,180096184,180098985,180114880	Gene ID= ENSG00000135837.15 TPM= 3.86 Transcript Type= protein_coding
chr1	180154846	180198016	180154846	180198016	+	transcript8695.chr1.nic@QSOX1	transcript8695.chr1.nic	protein_coding	180154846,180166491,180175321,180175931,180178794,180182174,180183916,180186053,180189552,180190433,180194213,180196262,180197333	180155172,180166591,180175366,180176033,180178884,180182319,180184050,180186182,180189674,180190580,180194392,180196890,180198016	Gene ID= ENSG00000116260.16 TPM= 12.55 Transcript Type= NA
chr1	180154834	180204030	180154834	180204030	+	ENST00000367602.7@QSOX1	ENST00000367602.7	protein_coding	180154834,180166491,180175321,180175931,180178794,180182174,180183916,180186053,180189552,180190433,180194213,180196262	180155172,180166591,180175366,180176033,180178884,180182319,180184050,180186182,180189674,180190580,180194392,180204030	Gene ID= ENSG00000116260.16 TPM= 18.34 Transcript Type= protein_coding
chr1	180154897	180198034	180154897	180198034	+	ENST00000367600.5@QSOX1	ENST00000367600.5	protein_coding	180154897,180166491,180175321,180175931,180178794,180182174,180183916,180186053,180189552,180190433,180194213,180196262,180197333	180155172,180166591,180175366,180176033,180178884,180182319,180184050,180186182,180189674,180190580,180194392,180196599,180198034	Gene ID= ENSG00000116260.16 TPM= 118.73 Transcript Type= protein_coding
chr1	180288230	180502954	180288230	180502954	-	ENST00000367595.3@ACBD6	ENST00000367595.3	protein_coding	180502045,180495461,180492269,180430180,180413366,180397516,180314692,180288230	180502954,180495525,180492365,180430262,180413471,180397605,180314722,180288517	Gene ID= ENSG00000230124.6 TPM= 48.27 Transcript Type= protein_coding
chr1	180499974	180501916	180499974	180501916	+	transcript8712.chr1.nnic@NA	transcript8712.chr1.nnic	NA	180499974	180501916	Gene ID= novel_gene_chr1_8713 TPM= 1.93 Transcript Type= NA
chr1	180632011	180838866	180632011	180838866	+	transcript8715.chr1.nic@XPR1	transcript8715.chr1.nic	protein_coding	180632011,180682360,180787753,180803388,180806062,180806474,180811407,180824753,180825165,180834874,180836522	180632270,180682411,180787854,180803611,180806211,180806557,180811488,180824943,180825344,180835045,180838866	Gene ID= ENSG00000143324.13 TPM= 2.9 Transcript Type= NA
chr1	180632011	180826543	180632011	180826543	+	transcript8716.chr1.nic@XPR1	transcript8716.chr1.nic	protein_coding	180632011,180682360,180787753,180803388,180806062,180806474,180811407,180824753,180825165	180632270,180682411,180787854,180803611,180806211,180806557,180811488,180824943,180826543	Gene ID= ENSG00000143324.13 TPM= 1.93 Transcript Type= NA
chr1	180949697	181022925	180949697	181022925	-	transcript8721.chr1.nnic@STX6	transcript8721.chr1.nnic	protein_coding	181022639,181005294,181002606,180993363,180989984,180988239,180984677,180949697	181022925,181005463,181002700,180993425,180990109,180988345,180984771,180950918	Gene ID= ENSG00000135823.13 TPM= 2.9 Transcript Type= NA
chr1	181034003	181056553	181034003	181056553	+	ENST00000282990.10@MR1	ENST00000282990.10	protein_coding	181034003,181049052,181050011,181053573,181055225	181034074,181049312,181050286,181053677,181056553	Gene ID= ENSG00000153029.14 TPM= 1.93 Transcript Type= protein_coding
chr1	181056152	181061726	181056152	181061726	+	transcript8732.chr1.nnic@NA	transcript8732.chr1.nnic	NA	181056152	181061726	Gene ID= novel_gene_chr1_8733 TPM= 1.93 Transcript Type= NA
chr1	181086647	181089837	181086647	181089837	-	transcript8742.chr1.nnic@NA	transcript8742.chr1.nnic	NA	181086647	181089837	Gene ID= novel_gene_chr1_8743 TPM= 1.93 Transcript Type= NA
chr1	181088555	181090836	181088555	181090836	+	transcript8734.chr1.nnic@NA	transcript8734.chr1.nnic	NA	181088555	181090836	Gene ID= novel_gene_chr1_8735 TPM= 419.91 Transcript Type= NA
chr1	181088823	181093165	181088823	181093165	+	transcript8740.chr1.nnic@NA	transcript8740.chr1.nnic	NA	181088823	181093165	Gene ID= novel_gene_chr1_8741 TPM= 4.83 Transcript Type= NA
chr1	182381705	182392206	182381705	182392206	-	ENST00000311223.9@GLUL	ENST00000311223.9	protein_coding	182391679,182390497,182388572,182387131,182386256,182385760,182385357,182381705	182392206,182390852,182388750,182387292,182386402,182385887,182385556,182384723	Gene ID= ENSG00000135821.17 TPM= 12.52 Transcript Type= protein_coding
chr1	182381704	182392206	182381704	182392206	-	ENST00000331872.10@GLUL	ENST00000331872.10	protein_coding	182391679,182388572,182387131,182386256,182385760,182385357,182381704	182392206,182388750,182387292,182386402,182385887,182385556,182384723	Gene ID= ENSG00000135821.17 TPM= 133.71 Transcript Type= protein_coding
chr1	182382894	182391792	182382894	182391792	-	ENST00000339526.8@GLUL	ENST00000339526.8	protein_coding	182390497,182388572,182387131,182386256,182385760,182385357,182382894	182391792,182388750,182387292,182386402,182385887,182385556,182384723	Gene ID= ENSG00000135821.17 TPM= 391.5 Transcript Type= protein_coding
chr1	182382896	182391792	182382896	182391792	-	transcript8780.chr1.nnic@GLUL	transcript8780.chr1.nnic	protein_coding	182391679,182388572,182387131,182386256,182385808,182382896	182391792,182388750,182387292,182386402,182385887,182383179	Gene ID= ENSG00000135821.17 TPM= 80.15 Transcript Type= NA
chr1	182386775	182391774	182386775	182391774	-	ENST00000462444.1@GLUL	ENST00000462444.1	protein_coding	182391679,182388572,182386775	182391774,182388750,182387292	Gene ID= ENSG00000135821.17 TPM= 2.73 Transcript Type= processed_transcript
chr1	182576256	182589271	182576256	182589271	-	transcript8799.chr1.nic@RNASEL	transcript8799.chr1.nic	protein_coding	182589167,182585327,182584081,182582053,182581225,182576256	182589271,182586970,182584166,182582258,182581357,182576389	Gene ID= ENSG00000135828.11 TPM= 1.93 Transcript Type= NA
chr1	182573634	182589256	182573634	182589256	-	ENST00000367559.7@RNASEL	ENST00000367559.7	protein_coding	182589167,182585327,182584081,182582053,182581225,182576256,182573634	182589256,182586970,182584166,182582258,182581357,182576389,182575578	Gene ID= ENSG00000135828.11 TPM= 2.9 Transcript Type= protein_coding
chr1	182598623	182604408	182598623	182604408	-	ENST00000367558.5@RGS16	ENST00000367558.5	protein_coding	182604216,182603229,182602420,182601966,182598623	182604408,182603339,182602484,182602132,182600513	Gene ID= ENSG00000143333.6 TPM= 6.76 Transcript Type= protein_coding
chr1	182789774	182830139	182789774	182830139	+	transcript8807.chr1.nnic@NPL	transcript8807.chr1.nnic	protein_coding	182789774,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182822115,182825781,182829603	182789904,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182822199,182825820,182830139	Gene ID= ENSG00000135838.13 TPM= 1.93 Transcript Type= NA
chr1	182839316	182887751	182839316	182887751	+	transcript8808.chr1.nic@DHX9	transcript8808.chr1.nic	protein_coding	182839316,182842545,182843294,182852233,182853306,182854030,182855577,182856532,182858104,182858551,182858733,182859040,182859993,182866444,182866961,182872337,182874854,182876050,182876447,182876830,182878021,182879250,182880497,182881264,182881520,182883139,182883520,182884613,182887083	182839456,182842677,182843434,182852344,182853418,182854178,182855713,182856578,182858240,182858640,182858894,182859117,182860184,182866585,182867043,182872493,182874954,182876263,182876541,182876903,182878173,182879410,182880608,182881425,182881647,182883368,182883635,182884813,182887751	Gene ID= ENSG00000135829.16 TPM= 4.34 Transcript Type= NA
chr1	182839369	182887751	182839369	182887751	+	ENST00000367549.3@DHX9	ENST00000367549.3	protein_coding	182839369,182842545,182843294,182852233,182853306,182854030,182856532,182858104,182858551,182858733,182859040,182859993,182866444,182866961,182872337,182874854,182876050,182876447,182876830,182878021,182879250,182880497,182881264,182881520,182883139,182883520,182884613,182887083	182839456,182842677,182843434,182852344,182853418,182854178,182856578,182858240,182858640,182858894,182859117,182860184,182866585,182867043,182872493,182874954,182876263,182876541,182876903,182878173,182879410,182880608,182881425,182881647,182883368,182883635,182884813,182887751	Gene ID= ENSG00000135829.16 TPM= 40.06 Transcript Type= protein_coding
chr1	183023253	183125165	183023253	183125165	+	transcript8822.chr1.nic@LAMC1	transcript8822.chr1.nic	protein_coding	183023253,183103328,183108276,183110488,183114531,183115520,183116577,183116767,183117320,183117534,183118034,183121723,183122063,183124631	183024134,183103632,183108406,183110654,183114719,183115637,183116675,183116903,183117442,183117723,183118146,183121944,183122251,183125165	Gene ID= ENSG00000135862.5 TPM= 2.9 Transcript Type= NA
chr1	183023279	183105246	183023279	183105246	+	transcript8827.chr1.nic@LAMC1	transcript8827.chr1.nic	protein_coding	183023279,183103328	183024134,183105246	Gene ID= ENSG00000135862.5 TPM= 1.93 Transcript Type= NA
chr1	183023460	183145592	183023460	183145592	+	ENST00000258341.4@LAMC1	ENST00000258341.4	protein_coding	183023460,183103328,183108276,183110488,183114531,183115520,183116577,183116767,183117320,183117534,183118034,183121723,183122063,183124631,183125397,183126120,183127226,183128594,183130344,183131299,183132400,183133406,183134660,183135042,183136386,183137669,183140404,183142534	183024134,183103632,183108406,183110654,183114719,183115637,183116675,183116903,183117442,183117723,183118146,183121944,183122251,183124876,183125550,183126262,183127404,183128750,183130549,183131378,183132537,183133550,183134809,183135156,183136585,183137827,183140503,183145592	Gene ID= ENSG00000135862.5 TPM= 49.23 Transcript Type= protein_coding
chr1	183234853	183244559	183234853	183244559	+	transcript8830.chr1.nnic@LAMC2	transcript8830.chr1.nnic	protein_coding	183234853,183235575,183236460,183237352,183238307,183239364,183240040,183240292,183243147	183235376,183235730,183236604,183237504,183238421,183239563,183240198,183240391,183244559	Gene ID= ENSG00000058085.14 TPM= 2.9 Transcript Type= NA
chr1	183472478	183554193	183472478	183554193	+	ENST00000367537.7@SMG7	ENST00000367537.7	protein_coding	183472478,183502253,183512837,183515874,183517688,183526596,183527956,183528892,183529398,183533164,183533676,183537145,183538380,183540984,183542076,183544353,183544930,183545966,183547103,183549208,183549764,183550751,183551045,183551818	183472649,183502391,183512868,183515991,183517820,183526767,183528027,183529042,183529533,183533326,183533832,183537215,183538440,183541103,183542364,183544497,183545312,183546337,183547252,183549288,183549923,183550921,183551190,183554193	Gene ID= ENSG00000116698.21 TPM= 7.72 Transcript Type= protein_coding
chr1	183472527	183554190	183472527	183554190	+	ENST00000515829.6@SMG7	ENST00000515829.6	protein_coding	183472527,183512837,183515874,183517688,183526596,183527956,183528892,183529398,183533164,183533676,183537145,183538380,183540984,183542076,183544353,183544930,183545966,183549208,183549764,183550751,183551045,183551818	183472649,183512868,183515991,183517820,183526767,183528027,183529042,183529533,183533326,183533832,183537215,183538440,183541103,183542364,183544497,183545312,183546337,183549288,183549923,183550921,183551190,183554190	Gene ID= ENSG00000116698.21 TPM= 4.83 Transcript Type= protein_coding
chr1	184051730	184074212	184051730	184074212	+	transcript8840.chr1.nnic@TSEN15	transcript8840.chr1.nnic	protein_coding	184051730,184054354,184054728,184072157,184072827	184051890,184054435,184054863,184072310,184074212	Gene ID= ENSG00000198860.11 TPM= 2.9 Transcript Type= NA
chr1	184051702	184095839	184051702	184095839	+	transcript8842.chr1.nnic@TSEN15	transcript8842.chr1.nnic	protein_coding	184051702,184054354,184054728,184095690	184051890,184054435,184054863,184095839	Gene ID= ENSG00000198860.11 TPM= 11.58 Transcript Type= NA
chr1	184051677	184074212	184051677	184074212	+	ENST00000361641.5@TSEN15	ENST00000361641.5	protein_coding	184051677,184054354,184054728,184072157,184072827	184051890,184054435,184054863,184072298,184074212	Gene ID= ENSG00000198860.11 TPM= 20.27 Transcript Type= protein_coding
chr1	184051746	184074206	184051746	184074206	+	ENST00000423085.6@TSEN15	ENST00000423085.6	protein_coding	184051746,184054354,184054728,184072827	184051890,184054435,184054863,184074206	Gene ID= ENSG00000198860.11 TPM= 5.79 Transcript Type= protein_coding
chr1	184619526	184623693	184619526	184623693	+	transcript8863.chr1.nnic@NA	transcript8863.chr1.nnic	NA	184619526	184623693	Gene ID= novel_gene_chr1_8864 TPM= 2.9 Transcript Type= NA
chr1	184663338	184664457	184663338	184664457	-	transcript8865.chr1.nnic@NA	transcript8865.chr1.nnic	NA	184663338	184664457	Gene ID= novel_gene_chr1_8866 TPM= 3.86 Transcript Type= NA
chr1	184690231	184754913	184690231	184754913	-	ENST00000318130.12@EDEM3	ENST00000318130.12	protein_coding	184754489,184749547,184737611,184737025,184734531,184732837,184726255,184723751,184721289,184719443,184719162,184717540,184716888,184712433,184711723,184710394,184708153,184706643,184702811,184690231	184754913,184749592,184737711,184737064,184734643,184732990,184726389,184723856,184721386,184719568,184719245,184717623,184717012,184712598,184711877,184710547,184708344,184706808,184702996,184694472	Gene ID= ENSG00000116406.18 TPM= 7.72 Transcript Type= protein_coding
chr1	184780962	184788882	184780962	184788882	+	transcript8877.chr1.nnic@NA	transcript8877.chr1.nnic	NA	184780962	184788882	Gene ID= novel_gene_chr1_8878 TPM= 1.93 Transcript Type= NA
chr1	184795533	184974508	184795533	184974508	-	transcript8879.chr1.nnic@FAM129A	transcript8879.chr1.nnic	protein_coding	184974302,184964353,184899179,184894075,184890108,184884633,184831847,184823638,184823167,184818638,184808074,184805946,184803585,184798079,184795533	184974508,184964681,184899309,184894206,184890222,184884800,184831962,184823742,184823329,184818825,184808235,184806056,184803692,184798190,184796097	Gene ID= ENSG00000135842.16 TPM= 4.34 Transcript Type= NA
chr1	184795533	184974497	184795533	184974497	-	transcript8885.chr1.nnic@FAM129A	transcript8885.chr1.nnic	protein_coding	184974302,184899179,184894075,184890108,184884633,184831847,184823638,184823167,184818638,184808074,184803585,184798079,184795533	184974497,184899309,184894206,184890222,184884800,184831962,184823742,184823329,184818825,184808235,184803692,184798190,184796097	Gene ID= ENSG00000135842.16 TPM= 4.34 Transcript Type= NA
chr1	184874164	184974671	184874164	184974671	-	transcript8888.chr1.nnic@FAM129A	transcript8888.chr1.nnic	protein_coding	184974302,184899179,184894075,184890108,184884633,184874164	184974671,184899309,184894206,184890222,184884800,184875742	Gene ID= ENSG00000135842.16 TPM= 4.83 Transcript Type= NA
chr1	184963007	184974556	184963007	184974556	-	transcript8892.chr1.nnic@FAM129A	transcript8892.chr1.nnic	protein_coding	184974302,184963007	184974556,184964681	Gene ID= ENSG00000135842.16 TPM= 1.93 Transcript Type= NA
chr1	184791030	184974550	184791030	184974550	-	ENST00000367511.3@FAM129A	ENST00000367511.3	protein_coding	184974302,184899179,184894075,184890108,184884633,184831847,184823638,184823167,184818638,184808074,184805946,184803585,184798079,184791030	184974550,184899309,184894206,184890222,184884800,184831962,184823742,184823329,184818825,184808235,184806056,184803692,184798190,184796097	Gene ID= ENSG00000135842.16 TPM= 29.92 Transcript Type= protein_coding
chr1	185118098	185156981	185118098	185156981	-	ENST00000367506.9@TRMT1L	ENST00000367506.9	protein_coding	185156478,185151825,185150379,185147182,185145439,185143906,185143357,185139973,185139367,185137606,185128669,185124944,185123857,185120383,185118098	185156981,185151935,185150492,185147246,185145568,185144029,185143436,185140222,185139579,185137796,185128747,185125110,185123919,185120509,185120271	Gene ID= ENSG00000121486.11 TPM= 7.72 Transcript Type= protein_coding
chr1	185157159	185291765	185157159	185291765	+	ENST00000367500.8@SWT1	ENST00000367500.8	protein_coding	185157159,185160833,185166572,185168340,185174372,185180391,185181946,185184243,185184743,185190549,185202654,185204700,185206625,185214507,185221849,185231577,185271323,185276604,185290674	185157314,185160925,185166652,185168398,185175113,185180450,185182057,185184344,185184931,185190642,185202799,185204863,185206763,185214655,185222036,185231708,185271389,185276668,185291765	Gene ID= ENSG00000116668.12 TPM= 1.93 Transcript Type= protein_coding
chr1	185304994	185317278	185304994	185317278	-	transcript8923.chr1.nic@IVNS1ABP	transcript8923.chr1.nic	protein_coding	185316953,185311095,185309383,185309003,185308800,185307489,185307014,185304994	185317278,185311322,185309511,185309172,185308875,185307662,185307139,185306625	Gene ID= ENSG00000116679.15 TPM= 8.21 Transcript Type= NA
chr1	185296388	185317329	185296388	185317329	-	ENST00000367498.7@IVNS1ABP	ENST00000367498.7	protein_coding	185316953,185311095,185309383,185309003,185308800,185307489,185307014,185305536,185301434,185300972,185300437,185300217,185299999,185299710,185296388	185317329,185311322,185309511,185309172,185308875,185307662,185307139,185305643,185301563,185301196,185300558,185300343,185300130,185299883,185298288	Gene ID= ENSG00000116679.15 TPM= 17.86 Transcript Type= protein_coding
chr1	186336561	186375354	186336561	186375354	-	transcript8925.chr1.nic@TPR	transcript8925.chr1.nic	protein_coding	186374878,186373359,186370970,186367886,186363342,186362837,186362288,186361789,186361622,186360765,186360273,186359799,186358543,186357397,186356286,186355635,186355410,186353688,186351976,186351330,186350223,186347292,186346135,186345580,186344375,186343906,186343326,186341252,186341028,186339642,186338033,186337013,186336561	186375354,186373463,186371043,186367982,186363445,186363001,186362380,186361869,186361709,186360905,186360364,186359996,186358650,186357623,186356449,186355768,186355558,186353850,186352110,186351470,186350388,186347458,186346287,186345696,186344578,186344090,186343473,186341389,186341159,186339772,186338243,186337156,186336694	Gene ID= ENSG00000047410.13 TPM= 10.94 Transcript Type= NA
chr1	186355523	186375733	186355523	186375733	-	transcript8927.chr1.nic@TPR	transcript8927.chr1.nic	protein_coding	186375559,186374878,186373359,186370970,186367886,186363342,186362837,186362288,186361789,186361622,186360765,186360273,186359799,186358543,186357397,186356286,186355635,186355523	186375733,186375186,186373463,186371043,186367982,186363445,186363001,186362380,186361869,186361709,186360905,186360364,186359996,186358650,186357623,186356449,186355768,186355558	Gene ID= ENSG00000047410.13 TPM= 13.83 Transcript Type= NA
chr1	193012371	193059359	193012371	193059359	-	transcript8950.chr1.nic@UCHL5	transcript8950.chr1.nic	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193020307,193012371	193059359,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023039,193021195,193020381,193016395	Gene ID= ENSG00000116750.13 TPM= 1.93 Transcript Type= NA
chr1	193012250	193059496	193012250	193059496	-	ENST00000367455.8@UCHL5	ENST00000367455.8	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193012250	193059496,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023039,193021195,193016395	Gene ID= ENSG00000116750.13 TPM= 5.79 Transcript Type= protein_coding
chr1	193015759	193059496	193015759	193059496	-	ENST00000367454.5@UCHL5	ENST00000367454.5	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193015759	193059496,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193016395	Gene ID= ENSG00000116750.13 TPM= 4.83 Transcript Type= protein_coding
chr1	193059558	193084881	193059558	193084881	+	transcript8982.chr1.nic@TROVE2	transcript8982.chr1.nic	protein_coding	193059558,193059874,193069034,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193060222,193069634,193076040,193076647,193077050,193081480,193082299,193082708,193084881	Gene ID= ENSG00000116747.12 TPM= 3.86 Transcript Type= NA
chr1	193059631	193084881	193059631	193084881	+	transcript8983.chr1.nic@TROVE2	transcript8983.chr1.nic	protein_coding	193059631,193069034,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193069181,193076040,193076647,193077050,193081480,193082299,193082708,193084881	Gene ID= ENSG00000116747.12 TPM= 1.93 Transcript Type= NA
chr1	193059422	193084881	193059422	193084881	+	ENST00000400968.6@TROVE2	ENST00000400968.6	protein_coding	193059422,193069034,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193069634,193076040,193076647,193077050,193081480,193082299,193082708,193084881	Gene ID= ENSG00000116747.12 TPM= 16.41 Transcript Type= protein_coding
chr1	193059454	193091219	193059454	193091219	+	ENST00000432079.5@TROVE2	ENST00000432079.5	protein_coding	193059454,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193076040,193076647,193077050,193081480,193082299,193082708,193091219	Gene ID= ENSG00000116747.12 TPM= 57.92 Transcript Type= protein_coding
chr1	193096468	193105431	193096468	193105431	-	ENST00000367439.7@GLRX2	ENST00000367439.7	protein_coding	193105264,193101141,193097584,193096468	193105431,193101204,193097760,193096759	Gene ID= ENSG00000023572.8 TPM= 48.27 Transcript Type= protein_coding
chr1	193122017	193253901	193122017	193253901	+	ENST00000367435.3@CDC73	ENST00000367435.3	protein_coding	193122017,193125112,193130174,193135391,193135537,193138085,193141850,193147867,193150304,193152380,193203795,193212065,193212390,193232993,193236256,193249730,193250676	193122331,193125217,193130243,193135453,193135589,193138173,193142066,193147965,193150382,193152444,193203852,193212100,193212477,193233154,193236356,193249871,193253901	Gene ID= ENSG00000134371.10 TPM= 3.86 Transcript Type= protein_coding
chr1	196651878	196747504	196651878	196747504	+	ENST00000367429.8@CFH	ENST00000367429.8	protein_coding	196651878,196672978,196673857,196675989,196677476,196679623,196685064,196689420,196690063,196713735,196715593,196725121,196726470,196726761,196728346,196736824,196737475,196740619,196741875,196743452,196745817,196747111	196652175,196673163,196673962,196676065,196677667,196679793,196685237,196689614,196690239,196713917,196715769,196725297,196726652,196726940,196728522,196737006,196737660,196740792,196742051,196743628,196745999,196747504	Gene ID= ENSG00000000971.15 TPM= 4.83 Transcript Type= protein_coding
chr1	196652045	196701566	196652045	196701566	+	ENST00000630130.2@CFH	ENST00000630130.2	protein_coding	196652045,196672978,196673857,196675989,196677476,196679623,196685064,196689420,196690063,196701318	196652175,196673163,196673962,196676065,196677667,196679793,196685237,196689614,196690239,196701566	Gene ID= ENSG00000000971.15 TPM= 5.79 Transcript Type= protein_coding
chr1	197155121	197201327	197155121	197201327	-	transcript9022.chr1.nnic@ZBTB41	transcript9022.chr1.nnic	protein_coding	197201223,197199354,197191692,197190762,197188292,197180988,197178417,197176564,197175010,197172160,197155121	197201327,197200590,197191899,197190831,197188439,197181117,197178512,197176670,197175115,197172248,197160014	Gene ID= ENSG00000177888.7 TPM= 2.9 Transcript Type= NA
chr1	197509644	197775605	197509644	197775605	-	transcript9028.chr1.nic@DENND1B	transcript9028.chr1.nic	protein_coding	197775139,197772868,197715031,197674120,197672037,197658300,197652235,197645690,197642711,197617659,197611931,197607073,197595208,197583152,197553022,197546733,197545922,197540959,197539964,197512871,197511728,197509644	197775605,197772932,197715074,197674169,197672156,197658369,197652315,197645743,197642821,197617759,197611976,197607174,197595333,197583253,197553112,197546773,197545990,197541015,197540071,197512953,197511944,197510972	Gene ID= ENSG00000213047.12 TPM= 3.86 Transcript Type= NA
chr1	197902647	197907367	197902647	197907367	+	ENST00000367393.7@C1orf53	ENST00000367393.7	protein_coding	197902647,197905796,197907149	197902913,197905897,197907367	Gene ID= ENSG00000203724.10 TPM= 4.83 Transcript Type= protein_coding
chr1	198156963	198322420	198156963	198322420	+	ENST00000367385.8@NEK7	ENST00000367385.8	protein_coding	198156963,198232553,198253040,198262575,198264125,198277961,198278954,198292945,198297127,198319412	198157276,198232637,198253180,198262637,198264235,198278069,198279061,198293039,198297240,198322420	Gene ID= ENSG00000151414.14 TPM= 92.67 Transcript Type= protein_coding
chr1	200404940	200410056	200404940	200410056	-	ENST00000294740.3@ZNF281	ENST00000294740.3	protein_coding	200409946,200404940	200410056,200409719	Gene ID= ENSG00000162702.7 TPM= 9.65 Transcript Type= protein_coding
chr1	200406708	200410009	200406708	200410009	-	ENST00000367353.1@ZNF281	ENST00000367353.1	protein_coding	200409946,200406708	200410009,200409723	Gene ID= ENSG00000162702.7 TPM= 30.89 Transcript Type= protein_coding
chr1	200644039	200669922	200644039	200669922	-	transcript9050.chr1.nnic@DDX59	transcript9050.chr1.nnic	protein_coding	200669767,200665937,200663919,200659027,200649074,200648439,200644039	200669922,200666751,200664086,200659116,200649226,200648567,200644517	Gene ID= ENSG00000118197.13 TPM= 4.83 Transcript Type= NA
chr1	200644044	200670001	200644044	200670001	-	transcript9051.chr1.nnic@DDX59	transcript9051.chr1.nnic	protein_coding	200669767,200665937,200663919,200659027,200650425,200649074,200644044	200670001,200666751,200664086,200659116,200650676,200649226,200644517	Gene ID= ENSG00000118197.13 TPM= 3.86 Transcript Type= NA
chr1	200644039	200669969	200644039	200669969	-	ENST00000331314.10@DDX59	ENST00000331314.10	protein_coding	200669767,200665937,200663919,200659027,200650425,200649074,200648439,200644039	200669969,200666751,200664086,200659116,200650676,200649226,200648567,200644517	Gene ID= ENSG00000118197.13 TPM= 63.71 Transcript Type= protein_coding
chr1	201039514	201112566	201039514	201112566	-	ENST00000362061.3@CACNA1S	ENST00000362061.3	protein_coding	201112188,201110164,201093882,201091972,201091640,201089258,201087826,201085436,201084950,201083162,201077879,201076920,201075495,201074506,201073549,201072755,201070272,201069472,201069137,201066887,201066229,201065838,201062462,201061944,201061267,201060658,201059189,201058408,201054505,201053459,201053209,201052557,201050984,201050389,201049003,201048582,201047525,201047115,201044328,201043281,201041504,201040622,201040231,201039514	201112566,201110269,201094021,201092114,201091792,201089463,201087929,201085581,201085031,201083322,201078104,201077127,201075615,201074620,201073642,201072824,201070404,201069601,201069196,201066993,201066316,201065945,201062514,201062090,201061468,201060816,201059299,201058491,201054561,201053587,201053274,201052648,201051143,201050516,201049099,201048684,201047626,201047239,201044456,201043531,201041589,201040713,201040374,201040082	Gene ID= ENSG00000081248.10 TPM= 67.57 Transcript Type= protein_coding
chr1	201039512	201112451	201039512	201112451	-	ENST00000367338.7@CACNA1S	ENST00000367338.7	protein_coding	201112188,201110164,201093882,201091972,201091640,201089258,201087826,201085436,201084950,201083162,201077879,201076920,201075495,201074506,201073549,201072755,201070272,201069472,201069137,201066887,201066229,201065838,201062462,201061944,201061267,201060658,201059189,201058408,201053459,201053209,201052557,201050984,201050389,201049003,201048582,201047525,201047115,201044328,201043281,201041504,201040622,201040231,201039512	201112451,201110269,201094021,201092114,201091792,201089463,201087929,201085581,201085031,201083322,201078104,201077127,201075615,201074620,201073642,201072824,201070404,201069601,201069196,201066993,201066316,201065945,201062514,201062090,201061468,201060816,201059299,201058491,201053587,201053274,201052648,201051143,201050516,201049099,201048684,201047626,201047239,201044456,201043531,201041589,201040713,201040374,201040082	Gene ID= ENSG00000081248.10 TPM= 38.61 Transcript Type= protein_coding
chr1	201134772	201154494	201134772	201154494	-	ENST00000367334.9@TMEM9	ENST00000367334.9	protein_coding	201154445,201153858,201151761,201146740,201143820,201134772	201154494,201153959,201151852,201146848,201143951,201135815	Gene ID= ENSG00000116857.16 TPM= 14 Transcript Type= protein_coding
chr1	201134772	201171574	201134772	201171574	-	ENST00000367333.6@TMEM9	ENST00000367333.6	protein_coding	201171490,201153858,201151761,201146740,201143820,201134772	201171574,201153959,201151852,201146848,201143951,201135815	Gene ID= ENSG00000116857.16 TPM= 9.17 Transcript Type= protein_coding
chr1	201190825	201228952	201190825	201228952	+	ENST00000335211.8@IGFN1	ENST00000335211.8	protein_coding	201190825,201193247,201194154,201195839,201197218,201199334,201199609,201200237,201201719,201203738,201205082,201206083,201214177,201215013,201215539,201216454,201217287,201218530,201221444,201222739,201224679,201225824,201226882,201228386	201190907,201193300,201194273,201195978,201197317,201199378,201199654,201200411,201201832,201203906,201205354,201213621,201214301,201215154,201215838,201216753,201217460,201218658,201221746,201222827,201224874,201226123,201227208,201228952	Gene ID= ENSG00000163395.16 TPM= 23.17 Transcript Type= protein_coding
chr1	201359009	201377700	201359009	201377700	-	ENST00000458432.6@TNNT2	ENST00000458432.6	protein_coding	201377623,201373206,201372027,201369816,201368162,201367771,201366838,201365610,201365191,201364298,201363296,201361913,201361279,201359623,201359009	201377700,201373268,201372045,201369845,201368227,201367806,201366871,201365670,201365307,201364375,201363406,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 1.93 Transcript Type= protein_coding
chr1	201381207	201384039	201381207	201384039	-	transcript9084.chr1.nnic@LAD1	transcript9084.chr1.nnic	protein_coding	201383707,201383317,201383074,201382653,201382252,201381207	201384039,201383389,201383211,201382739,201382326,201381893	Gene ID= ENSG00000159166.13 TPM= 1.93 Transcript Type= NA
chr1	201429144	201429892	201429144	201429892	-	transcript9103.chr1.nnic@TNNI1	transcript9103.chr1.nnic	protein_coding	201429573,201429144	201429892,201429274	Gene ID= ENSG00000159173.18 TPM= 7.24 Transcript Type= NA
chr1	201403768	201421746	201403768	201421746	-	ENST00000622580.4@TNNI1	ENST00000622580.4	protein_coding	201421673,201417783,201415213,201414518,201413032,201411357,201410326,201403768	201421746,201417812,201415258,201414649,201413121,201411533,201410435,201409250	Gene ID= ENSG00000159173.18 TPM= 55.99 Transcript Type= protein_coding
chr1	201404497	201421746	201404497	201421746	-	ENST00000361379.8@TNNI1	ENST00000361379.8	protein_coding	201421673,201417783,201417116,201415213,201414518,201413032,201411357,201410326,201404497	201421746,201417812,201417119,201415254,201414649,201413121,201411533,201410435,201409250	Gene ID= ENSG00000159173.18 TPM= 210.44 Transcript Type= protein_coding
chr1	201409857	201421718	201409857	201421718	-	ENST00000367312.5@TNNI1	ENST00000367312.5	protein_coding	201421673,201417783,201417116,201415213,201414518,201413032,201411357,201409857	201421718,201417812,201417119,201415254,201414649,201413121,201411533,201410435	Gene ID= ENSG00000159173.18 TPM= 9.65 Transcript Type= protein_coding
chr1	201464383	201469184	201464383	201469184	-	ENST00000367311.4@PHLDA3	ENST00000367311.4	protein_coding	201468341,201464383	201469184,201466178	Gene ID= ENSG00000174307.6 TPM= 2.9 Transcript Type= protein_coding
chr1	201483530	201509456	201483530	201509456	-	ENST00000367306.5@CSRP1	ENST00000367306.5	protein_coding	201509437,201507070,201496192,201490176,201488855,201485283,201483530	201509456,201507412,201496304,201490344,201488984,201485376,201484789	Gene ID= ENSG00000159176.13 TPM= 18.34 Transcript Type= protein_coding
chr1	201829141	201884294	201829141	201884294	+	ENST00000361565.8@IPO9	ENST00000361565.8	protein_coding	201829141,201847279,201847552,201848393,201852104,201853011,201854595,201854823,201855124,201855783,201857096,201858447,201858855,201863448,201866733,201868648,201869590,201870583,201871161,201872828,201874250,201874832,201875152,201875944	201829372,201847340,201847638,201848594,201852192,201853097,201854714,201854923,201855182,201855934,201857194,201858553,201858994,201863607,201866959,201868796,201869718,201870858,201871327,201872961,201874372,201874936,201875228,201884294	Gene ID= ENSG00000198700.9 TPM= 3.86 Transcript Type= protein_coding
chr1	201888708	201892306	201888708	201892306	+	ENST00000362011.6@SHISA4	ENST00000362011.6	protein_coding	201888708,201889445,201890454,201891401,201891800	201889067,201889616,201890587,201891568,201892306	Gene ID= ENSG00000198892.6 TPM= 84.95 Transcript Type= protein_coding
chr1	201896452	201946587	201896452	201946587	-	ENST00000367288.4@LMOD1	ENST00000367288.4	protein_coding	201946080,201899237,201896452	201946587,201900751,201898398	Gene ID= ENSG00000163431.12 TPM= 23.17 Transcript Type= protein_coding
chr1	201955490	201970351	201955490	201970351	+	transcript9145.chr1.nnic@TIMM17A	transcript9145.chr1.nnic	protein_coding	201955490,201957281,201957511,201958839,201963616,201965433,201969469	201955552,201957380,201957574,201958908,201963744,201965543,201970351	Gene ID= ENSG00000134375.10 TPM= 4.83 Transcript Type= NA
chr1	201955490	201970351	201955490	201970351	+	transcript9153.chr1.nnic@TIMM17A	transcript9153.chr1.nnic	protein_coding	201955490,201957281,201957511,201965433,201969469	201955552,201957380,201957574,201965543,201970351	Gene ID= ENSG00000134375.10 TPM= 1.93 Transcript Type= NA
chr1	201982624	202006147	201982624	202006147	+	ENST00000295640.8@RNPEP	ENST00000295640.8	protein_coding	201982624,201988904,201989383,201996147,201997319,201999902,202001376,202001659,202003237,202004354,202005558	201983113,201989044,201989531,201996263,201997554,202000015,202001488,202001767,202003461,202004496,202006147	Gene ID= ENSG00000176393.10 TPM= 37.65 Transcript Type= protein_coding
chr1	202133404	202144741	202133404	202144741	-	ENST00000272217.6@ARL8A	ENST00000272217.6	protein_coding	202144450,202138368,202137965,202135707,202135459,202135150,202133404	202144741,202138448,202138038,202135800,202135526,202135220,202134516	Gene ID= ENSG00000143862.7 TPM= 83.98 Transcript Type= protein_coding
chr1	202133404	202144743	202133404	202144743	-	ENST00000614750.1@ARL8A	ENST00000614750.1	protein_coding	202144450,202138368,202137965,202135707,202135150,202133404	202144743,202138448,202138038,202135800,202135220,202134516	Gene ID= ENSG00000143862.7 TPM= 7.72 Transcript Type= protein_coding
chr1	202133406	202135692	202133406	202135692	-	transcript9159.chr1.nnic@NA	transcript9159.chr1.nnic	NA	202133406	202135692	Gene ID= novel_gene_chr1_9160 TPM= 8.69 Transcript Type= NA
chr1	202331657	202341980	202331657	202341980	-	ENST00000367274.8@UBE2T	ENST00000367274.8	protein_coding	202341895,202335646,202334989,202333450,202333237,202333010,202331657	202341980,202335818,202335058,202333555,202333335,202333093,202331960	Gene ID= ENSG00000077152.9 TPM= 9.65 Transcript Type= protein_coding
chr1	202348699	202592706	202348699	202592706	+	ENST00000608999.5@PPP1R12B	ENST00000608999.5	protein_coding	202348699,202416787,202422620,202425566,202427040,202428855,202430731,202431480,202434656,202437821,202440706,202442447,202448989,202488533,202493114,202495293,202495570,202496781,202558877,202562778,202564443,202567778,202569147,202580474	202349142,202416917,202422738,202425725,202427184,202428929,202430810,202431619,202434768,202438024,202440788,202442572,202449171,202488623,202493317,202495482,202495682,202496822,202558893,202562922,202564547,202567831,202569197,202592706	Gene ID= ENSG00000077157.21 TPM= 11.58 Transcript Type= protein_coding
chr1	202561387	202562842	202561387	202562842	-	transcript9170.chr1.nnic@NA	transcript9170.chr1.nnic	NA	202561387	202562842	Gene ID= novel_gene_chr1_9171 TPM= 1.93 Transcript Type= NA
chr1	202585187	202588569	202585187	202588569	+	transcript9172.chr1.nnic@NA	transcript9172.chr1.nnic	NA	202585187	202588569	Gene ID= novel_gene_chr1_9173 TPM= 17.38 Transcript Type= NA
chr1	202771399	202808495	202771399	202808495	-	transcript9174.chr1.nnic@KDM5B	transcript9174.chr1.nnic	protein_coding	202808102,202777017,202774613,202773118,202771399	202808495,202777094,202774735,202773288,202773053	Gene ID= ENSG00000117139.16 TPM= 2.9 Transcript Type= NA
chr1	202878957	202889135	202878957	202889135	-	ENST00000367262.3@RABIF	ENST00000367262.3	protein_coding	202888973,202878957	202889135,202881223	Gene ID= ENSG00000183155.4 TPM= 4.83 Transcript Type= protein_coding
chr1	202891100	202927218	202891100	202927218	-	transcript9183.chr1.nnic@KLHL12	transcript9183.chr1.nnic	protein_coding	202927089,202924968,202919755,202918171,202911054,202909010,202894591,202894184,202893239,202891100	202927218,202925207,202919908,202918388,202911203,202909124,202894749,202894282,202893425,202892659	Gene ID= ENSG00000117153.15 TPM= 3.38 Transcript Type= NA
chr1	202891100	202927262	202891100	202927262	-	ENST00000367261.7@KLHL12	ENST00000367261.7	protein_coding	202927089,202924968,202919755,202918171,202911054,202909010,202896854,202895522,202894591,202894184,202893239,202891100	202927262,202925207,202919908,202918388,202911203,202909124,202896960,202895717,202894749,202894282,202893425,202892659	Gene ID= ENSG00000117153.15 TPM= 23.65 Transcript Type= protein_coding
chr1	202940826	202958354	202940826	202958354	-	transcript9188.chr1.nic@ADIPOR1	transcript9188.chr1.nic	protein_coding	202958185,202954241,202950930,202948304,202946439,202944983,202943758,202942025,202940826	202958354,202954307,202951164,202948420,202946610,202945169,202943945,202942218,202941701	Gene ID= ENSG00000159346.12 TPM= 167.32 Transcript Type= NA
chr1	202940823	202958389	202940823	202958389	-	ENST00000340990.9@ADIPOR1	ENST00000340990.9	protein_coding	202958185,202950930,202948304,202946439,202944983,202943758,202942025,202940823	202958389,202951164,202948420,202946610,202945169,202943945,202942218,202941701	Gene ID= ENSG00000159346.12 TPM= 45.42 Transcript Type= protein_coding
chr1	202961869	202967280	202961869	202967280	-	ENST00000367249.8@CYB5R1	ENST00000367249.8	protein_coding	202967191,202966749,202966528,202965887,202965371,202964612,202963642,202963066,202961869	202967280,202966898,202966600,202965993,202965500,202964695,202963727,202963165,202962699	Gene ID= ENSG00000159348.12 TPM= 488.45 Transcript Type= protein_coding
chr1	202965639	202967239	202965639	202967239	-	transcript9217.chr1.nnic@NA	transcript9217.chr1.nnic	NA	202965639	202967239	Gene ID= novel_gene_chr1_9218 TPM= 2.9 Transcript Type= NA
chr1	203007373	203023540	203007373	203023540	+	transcript9219.chr1.nic@TMEM183A	transcript9219.chr1.nic	protein_coding	203007373,203007774,203008643,203014889,203015960,203017756,203018481,203020793,203022855	203007574,203007863,203008810,203015048,203016140,203017919,203018561,203020948,203023540	Gene ID= ENSG00000163444.11 TPM= 4.03 Transcript Type= NA
chr1	203007373	203023540	203007373	203023540	+	transcript9220.chr1.nnic@TMEM183A	transcript9220.chr1.nnic	protein_coding	203007373,203007774,203008643,203014889,203015960,203017756,203018481,203020793,203022855	203007574,203007863,203008810,203015229,203016140,203017919,203018561,203020948,203023540	Gene ID= ENSG00000163444.11 TPM= 2.09 Transcript Type= NA
chr1	203007373	203023540	203007373	203023540	+	transcript9225.chr1.nic@TMEM183A	transcript9225.chr1.nic	protein_coding	203007373,203007774,203008643,203014889,203017756,203018481,203020793,203022855	203007574,203007863,203008810,203016140,203017919,203018561,203020948,203023540	Gene ID= ENSG00000163444.11 TPM= 4.03 Transcript Type= NA
chr1	203007379	203024848	203007379	203024848	+	transcript9227.chr1.nic@TMEM183A	transcript9227.chr1.nic	protein_coding	203007379,203008643,203014889,203015960,203017756,203018481,203020793,203022855	203007863,203008810,203015048,203016140,203017919,203018561,203020948,203024848	Gene ID= ENSG00000163444.11 TPM= 1.93 Transcript Type= NA
chr1	203007379	203023540	203007379	203023540	+	transcript9228.chr1.nnic@TMEM183A	transcript9228.chr1.nnic	protein_coding	203007379,203008643,203014889,203015960,203017756,203018481,203020793,203022855	203007863,203008810,203015229,203016140,203017919,203018561,203020948,203023540	Gene ID= ENSG00000163444.11 TPM= 2.09 Transcript Type= NA
chr1	203007379	203023540	203007379	203023540	+	transcript9232.chr1.nnic@TMEM183A	transcript9232.chr1.nnic	protein_coding	203007379,203008643,203014889,203015960,203018481,203020793,203022855	203007863,203008810,203015229,203016140,203018561,203020948,203023540	Gene ID= ENSG00000163444.11 TPM= 2.09 Transcript Type= NA
chr1	203007386	203024848	203007386	203024848	+	ENST00000367242.3@TMEM183A	ENST00000367242.3	protein_coding	203007386,203007774,203008643,203014889,203015960,203018481,203020793,203022855	203007574,203007863,203008810,203015048,203016140,203018561,203020948,203024848	Gene ID= ENSG00000163444.11 TPM= 5.79 Transcript Type= protein_coding
chr1	203060076	203062331	203060076	203062331	+	transcript9247.chr1.nic@PPFIA4	transcript9247.chr1.nic	protein_coding	203060076,203060970	203060417,203062331	Gene ID= ENSG00000143847.15 TPM= 1.93 Transcript Type= NA
chr1	203083132	203086036	203083132	203086036	-	ENST00000241651.4@MYOG	ENST00000241651.4	protein_coding	203085491,203084647,203083132	203086036,203084728,203084031	Gene ID= ENSG00000122180.4 TPM= 128.39 Transcript Type= protein_coding
chr1	203167811	203175826	203167811	203175826	-	transcript9250.chr1.nnic@MYBPH	transcript9250.chr1.nnic	protein_coding	203175551,203175327,203174430,203171952,203171383,203171061,203170291,203169253,203168906,203168627,203167811	203175826,203175461,203174597,203172040,203171578,203171200,203170450,203169389,203169092,203168675,203168452	Gene ID= ENSG00000133055.8 TPM= 7.72 Transcript Type= NA
chr1	203167811	203175813	203167811	203175813	-	ENST00000255416.8@MYBPH	ENST00000255416.8	protein_coding	203175551,203175327,203174430,203171952,203171383,203171061,203170291,203169253,203168906,203168627,203167811	203175813,203175461,203174597,203172040,203171578,203171200,203170450,203169389,203169092,203168675,203168091	Gene ID= ENSG00000133055.8 TPM= 49.23 Transcript Type= protein_coding
chr1	203178931	203186749	203178931	203186749	-	ENST00000255409.7@CHI3L1	ENST00000255409.7	protein_coding	203186599,203186316,203185184,203184576,203183641,203182731,203181162,203180470,203179761,203178931	203186749,203186345,203185385,203184632,203183791,203182852,203181285,203180652,203179877,203179585	Gene ID= ENSG00000133048.12 TPM= 9.65 Transcript Type= protein_coding
chr1	203305536	203309602	203305536	203309602	+	ENST00000290551.4@BTG2	ENST00000290551.4	protein_coding	203305536,203307104	203305748,203309602	Gene ID= ENSG00000159388.5 TPM= 319.52 Transcript Type= protein_coding
chr1	203340628	203351489	203340628	203351489	-	ENST00000354955.4@FMOD	ENST00000354955.4	protein_coding	203351033,203347292,203340628	203351489,203348277,203342494	Gene ID= ENSG00000122176.10 TPM= 13.51 Transcript Type= protein_coding
chr1	203626798	203700915	203626798	203700915	+	transcript9272.chr1.nic@ATP2B4	transcript9272.chr1.nic	protein_coding	203626798,203682742,203698157,203699460,203700206,203700798	203627219,203683398,203698354,203699717,203700331,203700915	Gene ID= ENSG00000058668.14 TPM= 2.9 Transcript Type= NA
chr1	203795660	203854121	203795660	203854121	+	ENST00000367210.2@ZC3H11A	ENST00000367210.2	protein_coding	203795660,203801575,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141	203795794,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854121	Gene ID= ENSG00000058673.16 TPM= 43.44 Transcript Type= protein_coding
chr1	204403387	204411791	204403387	204411791	-	ENST00000367188.4@PPP1R15B	ENST00000367188.4	protein_coding	204409492,204403387	204411791,204406313	Gene ID= ENSG00000158615.8 TPM= 27.99 Transcript Type= protein_coding
chr1	204411384	204412416	204411384	204412416	+	transcript9291.chr1.nnic@NA	transcript9291.chr1.nnic	NA	204411384	204412416	Gene ID= novel_gene_chr1_9292 TPM= 3.86 Transcript Type= NA
chr1	204551462	204555899	204551462	204555899	-	transcript9316.chr1.nnic@NA	transcript9316.chr1.nnic	NA	204555806,204552602,204551462	204555899,204555209,204552008	Gene ID= novel_gene_chr1_9317 TPM= 4.34 Transcript Type= NA
chr1	204551462	204556989	204551462	204556989	-	transcript9312.chr1.nnic@NA	transcript9312.chr1.nnic	NA	204555824,204552602,204551462	204556989,204554557,204552008	Gene ID= novel_gene_chr1_9313 TPM= 4.34 Transcript Type= NA
chr1	204617170	204685733	204617170	204685733	-	ENST00000367177.3@LRRN2	ENST00000367177.3	protein_coding	204685320,204617170	204685733,204620218	Gene ID= ENSG00000170382.11 TPM= 2.9 Transcript Type= protein_coding
chr1	205086142	205122015	205086142	205122015	-	ENST00000264515.10@RBBP5	ENST00000264515.10	protein_coding	205121855,205115858,205114789,205105028,205103857,205101600,205100152,205099911,205099741,205098989,205097326,205096682,205094873,205086142	205122015,205115883,205114961,205105168,205104019,205101709,205100271,205100064,205099812,205099106,205097395,205096911,205095064,205088815	Gene ID= ENSG00000117222.13 TPM= 6.76 Transcript Type= protein_coding
chr1	205087199	205121961	205087199	205121961	-	transcript9337.chr1.nnic@RBBP5	transcript9337.chr1.nnic	protein_coding	205121855,205115858,205114789,205105028,205103857,205101600,205100152,205099911,205099741,205098989,205097326,205096682,205094873,205087199	205121961,205115966,205114961,205105168,205104019,205101709,205100271,205100064,205099812,205099106,205097395,205096911,205095064,205088815	Gene ID= ENSG00000117222.13 TPM= 2.9 Transcript Type= NA
chr1	205146873	205211712	205146873	205211712	-	transcript9343.chr1.nnic@DSTYK	transcript9343.chr1.nnic	protein_coding	205211271,205187445,205169163,205163723,205162923,205162036,205161258,205160114,205159547,205157273,205150680,205148205,205146873	205211712,205187806,205169832,205163955,205163006,205162212,205161387,205160270,205159679,205157386,205150794,205148339,205147745	Gene ID= ENSG00000133059.16 TPM= 6.76 Transcript Type= NA
chr1	205302059	205321791	205302059	205321791	-	ENST00000367157.4@NUAK2	ENST00000367157.4	protein_coding	205321398,205311705,205308581,205308165,205306188,205305199,205302059	205321791,205311825,205308732,205308230,205306307,205305331,205304513	Gene ID= ENSG00000163545.8 TPM= 1.93 Transcript Type= protein_coding
chr1	205504599	205532793	205504599	205532793	+	ENST00000360066.6@CDK18	ENST00000360066.6	protein_coding	205504599,205523147,205523483,205524232,205525139,205526065,205526367,205526775,205527794,205528048,205528999,205529324,205529521,205530259,205530628,205531344	205504878,205523297,205523625,205524357,205525195,205526179,205526461,205526837,205527917,205528168,205529096,205529429,205529563,205530349,205530705,205532793	Gene ID= ENSG00000117266.15 TPM= 3.86 Transcript Type= protein_coding
chr1	205712819	205750276	205712819	205750276	-	ENST00000367142.4@NUCKS1	ENST00000367142.4	protein_coding	205749957,205729572,205727700,205723926,205720501,205719527,205712819	205750276,205729621,205727805,205723981,205720653,205719676,205718479	Gene ID= ENSG00000069275.12 TPM= 47.3 Transcript Type= protein_coding
chr1	205769437	205775449	205769437	205775449	-	ENST00000235932.8@RAB29	ENST00000235932.8	protein_coding	205775374,205774833,205772496,205771472,205770733,205769437	205775449,205775086,205772567,205771653,205770854,205770453	Gene ID= ENSG00000117280.12 TPM= 1.93 Transcript Type= protein_coding
chr1	205793797	205813214	205793797	205813214	-	transcript9383.chr1.nnic@SLC41A1	transcript9383.chr1.nnic	protein_coding	205812808,205810070,205800953,205799759,205798957,205798669,205797904,205796924,205795344,205794870,205793797	205813214,205811087,205801060,205799830,205799101,205798815,205798051,205797003,205795478,205795018,205793892	Gene ID= ENSG00000133065.10 TPM= 1.93 Transcript Type= NA
chr1	205807651	205813156	205807651	205813156	-	transcript9385.chr1.nic@SLC41A1	transcript9385.chr1.nic	protein_coding	205812808,205807651	205813156,205811087	Gene ID= ENSG00000133065.10 TPM= 1.93 Transcript Type= NA
chr1	205807823	205813150	205807823	205813150	-	transcript9386.chr1.nic@SLC41A1	transcript9386.chr1.nic	protein_coding	205812808,205807823	205813150,205811087	Gene ID= ENSG00000133065.10 TPM= 1.93 Transcript Type= NA
chr1	205789093	205813176	205789093	205813176	-	ENST00000367137.3@SLC41A1	ENST00000367137.3	protein_coding	205812808,205810070,205800953,205799759,205798957,205798669,205797904,205796924,205795344,205794870,205789093	205813176,205811087,205801060,205799830,205799101,205798815,205798051,205797003,205795478,205795018,205791718	Gene ID= ENSG00000133065.10 TPM= 46.33 Transcript Type= protein_coding
chr1	205813372	205815228	205813372	205815228	+	transcript9388.chr1.nnic@NA	transcript9388.chr1.nnic	NA	205813372	205815228	Gene ID= novel_gene_chr1_9389 TPM= 1.93 Transcript Type= NA
chr1	206557165	206589267	206557165	206589267	+	ENST00000577571.5@RASSF5	ENST00000577571.5	protein_coding	206557165,206583269,206584387,206585180,206586826	206557693,206583379,206584684,206585295,206589267	Gene ID= ENSG00000266094.7 TPM= 2.9 Transcript Type= protein_coding
chr1	206591642	206612452	206591642	206612452	-	transcript9394.chr1.nic@EIF2D	transcript9394.chr1.nic	protein_coding	206612287,206611184,206609376,206608280,206605400,206602951,206602336,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591642	206612452,206611374,206609459,206608326,206605507,206603204,206602453,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 4.3 Transcript Type= NA
chr1	206591642	206612469	206591642	206612469	-	transcript9396.chr1.nnic@EIF2D	transcript9396.chr1.nnic	protein_coding	206612287,206611184,206609376,206608236,206602951,206602336,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591642	206612469,206611374,206609459,206608326,206603204,206602453,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 11.05 Transcript Type= NA
chr1	206591642	206612528	206591642	206612528	-	transcript9398.chr1.nnic@EIF2D	transcript9398.chr1.nnic	protein_coding	206612287,206611184,206609376,206608236,206605400,206602951,206602336,206600263,206599733,206599003,206597100,206595718,206593619,206591642	206612528,206611374,206609459,206608326,206605507,206603204,206602453,206600308,206599836,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 8.88 Transcript Type= NA
chr1	206591642	206612459	206591642	206612459	-	ENST00000271764.6@EIF2D	ENST00000271764.6	protein_coding	206612287,206611184,206609376,206608236,206605400,206602951,206602336,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591642	206612459,206611374,206609459,206608326,206605507,206603204,206602453,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 37.12 Transcript Type= protein_coding
chr1	206591642	206612459	206591642	206612459	-	ENST00000367114.7@EIF2D	ENST00000367114.7	protein_coding	206612287,206611184,206609376,206608236,206605400,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591642	206612459,206611374,206609459,206608326,206605507,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 2.37 Transcript Type= protein_coding
chr1	206684433	206685965	206684433	206685965	-	transcript9412.chr1.nnic@NA	transcript9412.chr1.nnic	NA	206684433	206685965	Gene ID= novel_gene_chr1_9413 TPM= 1.93 Transcript Type= NA
chr1	206732207	206732996	206732207	206732996	+	transcript9410.chr1.nnic@NA	transcript9410.chr1.nnic	NA	206732207	206732996	Gene ID= novel_gene_chr1_9411 TPM= 1.93 Transcript Type= NA
chr1	206903867	206909601	206903867	206909601	-	transcript9416.chr1.nic@FCMR	transcript9416.chr1.nic	protein_coding	206909462,206903867	206909601,206905147	Gene ID= ENSG00000162894.11 TPM= 3.86 Transcript Type= NA
chr1	206904298	206909601	206904298	206909601	-	transcript9418.chr1.nic@FCMR	transcript9418.chr1.nic	protein_coding	206909462,206904298	206909601,206905147	Gene ID= ENSG00000162894.11 TPM= 2.9 Transcript Type= NA
chr1	206904362	206909948	206904362	206909948	-	transcript9419.chr1.nnic@FCMR	transcript9419.chr1.nnic	protein_coding	206909725,206904362	206909948,206905147	Gene ID= ENSG00000162894.11 TPM= 3.86 Transcript Type= NA
chr1	207043849	207051077	207043849	207051077	-	ENST00000315927.8@YOD1	ENST00000315927.8	protein_coding	207050688,207043849	207051077,207049723	Gene ID= ENSG00000180667.10 TPM= 2.9 Transcript Type= protein_coding
chr1	207053243	207080965	207053243	207080965	+	transcript9428.chr1.nnic@PFKFB2	transcript9428.chr1.nnic	protein_coding	207053243,207054701,207061953,207062620,207063143,207063347,207063773,207065036,207067499,207068163,207069424,207070280,207071188,207071509,207072204,207078954	207053366,207054802,207062078,207062716,207063209,207063421,207063829,207065160,207067706,207068309,207069528,207070409,207071250,207071573,207072383,207080965	Gene ID= ENSG00000123836.14 TPM= 1.93 Transcript Type= NA
chr1	207053311	207081024	207053311	207081024	+	ENST00000367079.3@PFKFB2	ENST00000367079.3	protein_coding	207053311,207054701,207061953,207062620,207063143,207063347,207063773,207065036,207067499,207068163,207069424,207070280,207071188,207071509,207078954	207053366,207054802,207062078,207062716,207063209,207063421,207063829,207065160,207067706,207068309,207069528,207070409,207071250,207071573,207081024	Gene ID= ENSG00000123836.14 TPM= 7.72 Transcript Type= protein_coding
chr1	207321508	207360966	207321508	207360966	+	ENST00000367064.7@CD55	ENST00000367064.7	protein_coding	207321508,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207359546	207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207360966	Gene ID= ENSG00000196352.14 TPM= 29.92 Transcript Type= protein_coding
chr1	207321532	207340766	207321532	207340766	+	ENST00000367063.6@CD55	ENST00000367063.6	protein_coding	207321532,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207340391	207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207340766	Gene ID= ENSG00000196352.14 TPM= 27.99 Transcript Type= protein_coding
chr1	207321701	207360501	207321701	207360501	+	ENST00000314754.12@CD55	ENST00000314754.12	protein_coding	207321701,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207340391,207359546	207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207340508,207360501	Gene ID= ENSG00000196352.14 TPM= 20.27 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000367041.5@CD46	ENST00000367041.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207770321,207783292,207785071,207785619,207790253,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207770362,207783330,207785106,207785682,207790345,207795513	Gene ID= ENSG00000117335.19 TPM= 36.68 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000357714.5@CD46	ENST00000357714.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207770321,207783292,207785071,207785619,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207770362,207783330,207785106,207785682,207795513	Gene ID= ENSG00000117335.19 TPM= 33.3 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000367042.5@CD46	ENST00000367042.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207767779,207770321,207783292,207785071,207785619,207790253,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207767823,207770362,207783330,207785106,207785682,207790345,207795513	Gene ID= ENSG00000117335.19 TPM= 5.79 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000354848.5@CD46	ENST00000354848.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207767779,207770321,207783292,207785071,207785619,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207767823,207770362,207783330,207785106,207785682,207795513	Gene ID= ENSG00000117335.19 TPM= 3.38 Transcript Type= protein_coding
chr1	207760638	207822703	207760638	207822703	-	transcript9476.chr1.nnic@C1orf132	transcript9476.chr1.nnic	lincRNA	207822204,207817239,207815929,207760638	207822703,207817414,207816080,207762988	Gene ID= ENSG00000203709.11 TPM= 1.93 Transcript Type= NA
chr1	207880972	207911402	207880972	207911402	-	ENST00000310833.11@CD34	ENST00000310833.11	protein_coding	207911002,207899821,207898973,207897493,207889465,207889161,207888682,207880972	207911402,207900003,207899226,207897573,207889621,207889213,207888846,207887923	Gene ID= ENSG00000174059.16 TPM= 6.76 Transcript Type= protein_coding
chr1	207886539	207911402	207886539	207911402	-	ENST00000356522.4@CD34	ENST00000356522.4	protein_coding	207911002,207899821,207898973,207897493,207889465,207889161,207888682,207886539	207911402,207900003,207899226,207897573,207889621,207889213,207888846,207888118	Gene ID= ENSG00000174059.16 TPM= 7.72 Transcript Type= protein_coding
chr1	209614875	209651334	209614875	209651334	-	ENST00000391911.5@LAMB3	ENST00000391911.5	protein_coding	209650917,209649964,209638534,209637908,209634447,209633070,209632583,209630615,209629737,209628035,209627383,209626867,209625648,209623840,209623505,209622982,209622536,209618452,209617907,209617410,209616471,209614875	209651334,209650118,209638648,209637981,209634638,209633133,209632776,209630735,209629925,209628190,209627579,209626978,209626026,209624000,209623725,209623179,209622680,209618659,209618048,209617586,209616624,209615407	Gene ID= ENSG00000196878.14 TPM= 1.93 Transcript Type= protein_coding
chr1	209661364	209675247	209661364	209675247	-	ENST00000445272.5@AL031316.1	ENST00000445272.5	antisense_RNA	209675222,209662911,209661364	209675247,209663061,209661567	Gene ID= ENSG00000227591.5 TPM= 1.93 Transcript Type= antisense_RNA
chr1	209675420	209676388	209675420	209676388	+	ENST00000367029.4@G0S2	ENST00000367029.4	protein_coding	209675420,209675653	209675549,209676388	Gene ID= ENSG00000123689.5 TPM= 397.71 Transcript Type= protein_coding
chr1	209704846	209734950	209704846	209734950	+	ENST00000367027.4@HSD11B1	ENST00000367027.4	protein_coding	209704846,209705811,209706709,209706943,209732436,209734304	209705030,209705941,209706820,209707128,209732579,209734950	Gene ID= ENSG00000117594.9 TPM= 1.93 Transcript Type= protein_coding
chr1	210231456	210234044	210231456	210234044	-	ENST00000437764.5@SERTAD4-AS1	ENST00000437764.5	antisense_RNA	210233635,210231456	210234044,210231771	Gene ID= ENSG00000203706.8 TPM= 1.93 Transcript Type= antisense_RNA
chr1	211257864	211259092	211257864	211259092	-	transcript9500.chr1.nnic@NA	transcript9500.chr1.nnic	NA	211258736,211257864	211259092,211258575	Gene ID= novel_gene_chr1_9501 TPM= 1.93 Transcript Type= NA
chr1	211259292	211313293	211259292	211313293	+	transcript9512.chr1.nic@RCOR3	transcript9512.chr1.nic	protein_coding	211259292,211260108,211271232,211274210,211276257,211278117,211279238,211289178,211295676,211304083,211312355,211312720	211259726,211260164,211271309,211274262,211276418,211278241,211279316,211289396,211295753,211304140,211312487,211313293	Gene ID= ENSG00000117625.13 TPM= 17.44 Transcript Type= NA
chr1	211259388	211313298	211259388	211313298	+	ENST00000452621.6@RCOR3	ENST00000452621.6	protein_coding	211259388,211260108,211271232,211274210,211276257,211278117,211279238,211289178,211295676,211304083,211312720	211259726,211260164,211271309,211274262,211276418,211278241,211279316,211289396,211295753,211304140,211313298	Gene ID= ENSG00000117625.13 TPM= 23.72 Transcript Type= protein_coding
chr1	211747852	211830770	211747852	211830770	-	transcript9558.chr1.nnic@LPGAT1	transcript9558.chr1.nnic	protein_coding	211830573,211830183,211829059,211793072,211787632,211783229,211778918,211750961,211747852	211830770,211830330,211829323,211793190,211787727,211783502,211779044,211751067,211750050	Gene ID= ENSG00000123684.12 TPM= 2.41 Transcript Type= NA
chr1	211940401	212035542	211940401	212035542	-	ENST00000366994.7@INTS7	ENST00000366994.7	protein_coding	212035344,212021083,212020122,212016886,212011375,212007250,212006639,211987886,211982676,211981093,211978272,211976582,211975166,211968513,211967878,211966430,211952569,211946607,211944784,211940401	212035542,212021212,212020268,212017023,212011421,212007449,212006761,211988003,211982810,211981190,211978511,211976719,211975372,211968707,211967981,211966498,211952701,211946705,211944969,211942111	Gene ID= ENSG00000143493.12 TPM= 1.93 Transcript Type= protein_coding
chr1	212051524	212052006	212051524	212052006	-	ENST00000401418.2@RPL21P28	ENST00000401418.2	processed_pseudogene	212051524	212052006	Gene ID= ENSG00000220749.4 TPM= 114.87 Transcript Type= processed_pseudogene
chr1	212285713	212361863	212285713	212361863	+	transcript9572.chr1.nnic@PPP2R5A	transcript9572.chr1.nnic	protein_coding	212285713,212306783,212329135,212333497,212342188,212345803,212347347,212348389,212349189,212356626,212356950,212357157,212358686,212360638	212286291,212306900,212329331,212333598,212342280,212345933,212347406,212348497,212349242,212356676,212357069,212357284,212358787,212361863	Gene ID= ENSG00000066027.11 TPM= 3.86 Transcript Type= NA
chr1	212285537	212361863	212285537	212361863	+	ENST00000261461.6@PPP2R5A	ENST00000261461.6	protein_coding	212285537,212329135,212333497,212342188,212345803,212347347,212348389,212349189,212356626,212356950,212357157,212358686,212360638	212286291,212329331,212333598,212342280,212345933,212347406,212348497,212349242,212356676,212357069,212357284,212358787,212361863	Gene ID= ENSG00000066027.11 TPM= 47.3 Transcript Type= protein_coding
chr1	212363931	212414895	212363931	212414895	-	ENST00000261455.8@TMEM206	ENST00000261455.8	protein_coding	212414722,212410425,212386891,212385274,212379895,212377562,212375193,212363931	212414895,212410521,212387100,212385425,212380037,212377706,212375300,212365376	Gene ID= ENSG00000065600.12 TPM= 1.93 Transcript Type= protein_coding
chr1	212432887	212446379	212432887	212446379	+	ENST00000366988.4@NENF	ENST00000366988.4	protein_coding	212432887,212442565,212444339,212445830	212433120,212442625,212444442,212446379	Gene ID= ENSG00000117691.9 TPM= 10.14 Transcript Type= protein_coding
chr1	212432923	212446372	212432923	212446372	+	ENST00000479589.5@NENF	ENST00000479589.5	protein_coding	212432923,212444339,212445830	212433120,212444442,212446372	Gene ID= ENSG00000117691.9 TPM= 4.34 Transcript Type= processed_transcript
chr1	212608670	212620777	212608670	212620777	+	ENST00000341491.8@ATF3	ENST00000341491.8	protein_coding	212608670,212615018,212618127,212619358	212608930,212615261,212618234,212620777	Gene ID= ENSG00000162772.16 TPM= 2.41 Transcript Type= protein_coding
chr1	212565337	212569826	212565337	212569826	+	transcript9594.chr1.nnic@ATF3	transcript9594.chr1.nnic	protein_coding	212565337,212569465	212565483,212569826	Gene ID= ENSG00000162772.16 TPM= 1.93 Transcript Type= NA
chr1	212565407	212569832	212565407	212569832	+	transcript9595.chr1.nnic@ATF3	transcript9595.chr1.nnic	protein_coding	212565407,212566662	212565483,212569832	Gene ID= ENSG00000162772.16 TPM= 1.93 Transcript Type= NA
chr1	212565334	212620772	212565334	212620772	+	ENST00000366987.6@ATF3	ENST00000366987.6	protein_coding	212565334,212615018,212618127,212619358	212565483,212615261,212618234,212620772	Gene ID= ENSG00000162772.16 TPM= 13.03 Transcript Type= protein_coding
chr1	212686418	212699985	212686418	212699985	-	ENST00000243440.1@BATF3	ENST00000243440.1	protein_coding	212699673,212696961,212686418	212699985,212697065,212686979	Gene ID= ENSG00000123685.8 TPM= 1.93 Transcript Type= protein_coding
chr1	212791828	212816626	212791828	212816626	+	ENST00000366974.8@TATDN3	ENST00000366974.8	protein_coding	212791828,212795095,212796517,212797112,212802701,212804320,212804596,212807736,212812248,212815013	212791987,212795127,212796590,212797196,212802763,212804429,212804651,212807848,212812328,212816626	Gene ID= ENSG00000203705.10 TPM= 11.58 Transcript Type= protein_coding
chr1	212791884	212816617	212791884	212816617	+	ENST00000366973.8@TATDN3	ENST00000366973.8	protein_coding	212791884,212795095,212796517,212797112,212802701,212804320,212804596,212807736,212812251,212815013	212791987,212795127,212796590,212797196,212802763,212804429,212804651,212807848,212812328,212816617	Gene ID= ENSG00000203705.10 TPM= 5.79 Transcript Type= protein_coding
chr1	212858255	212899363	212858255	212899363	+	ENST00000366971.8@FLVCR1	ENST00000366971.8	protein_coding	212858255,212863725,212872678,212883371,212885293,212887891,212888489,212889146,212894986,212895216	212859190,212863869,212872818,212883438,212885396,212888001,212888594,212889257,212895053,212899363	Gene ID= ENSG00000162769.12 TPM= 1.93 Transcript Type= protein_coding
chr1	212992182	213015826	212992182	213015826	-	ENST00000366962.7@ANGEL2	ENST00000366962.7	protein_coding	213015613,213013093,213008210,213007129,213005033,213000786,213000326,212997155,212992182	213015826,213013418,213008466,213007198,213005454,213000912,213000383,212997318,212995192	Gene ID= ENSG00000174606.13 TPM= 4.34 Transcript Type= protein_coding
chr1	212992182	213015789	212992182	213015789	-	transcript9632.chr1.nnic@ANGEL2	transcript9632.chr1.nnic	protein_coding	213015613,213013093,213008210,213007129,213005033,213000326,212997155,212992182	213015789,213013418,213008466,213007198,213005454,213000383,212997318,212995192	Gene ID= ENSG00000174606.13 TPM= 3.38 Transcript Type= NA
chr1	213051243	213273464	213051243	213273464	+	transcript9645.chr1.nic@RPS6KC1	transcript9645.chr1.nic	protein_coding	213051243,213071006,213072870,213077696,213104454,213117317,213129527,213167858,213176400,213230497,213232123,213240702,213242569,213261558,213262721,213272524	213051509,213071041,213072986,213077816,213104569,213117410,213129889,213167973,213176492,213230544,213232255,213242297,213242658,213261640,213262816,213273464	Gene ID= ENSG00000136643.11 TPM= 2.44 Transcript Type= NA
chr1	213051243	213273464	213051243	213273464	+	transcript9651.chr1.nnic@RPS6KC1	transcript9651.chr1.nnic	protein_coding	213051243,213071006,213077696,213104454,213117317,213129527,213167858,213230497,213232123,213240702,213242569,213261558,213262721,213272524	213051509,213071041,213077816,213104569,213117410,213129889,213167973,213230544,213232255,213241289,213242658,213261640,213262816,213273464	Gene ID= ENSG00000136643.11 TPM= 2.12 Transcript Type= NA
chr1	213051243	213273464	213051243	213273464	+	transcript9654.chr1.nic@RPS6KC1	transcript9654.chr1.nic	protein_coding	213051243,213071006,213077696,213104454,213117317,213129527,213167858,213230497,213232123,213240702,213242569,213261558,213262721,213272524	213051509,213071041,213077816,213104569,213117410,213129889,213167973,213230544,213232255,213242297,213242658,213261640,213262816,213273464	Gene ID= ENSG00000136643.11 TPM= 6.3 Transcript Type= NA
chr1	213051233	213273464	213051233	213273464	+	ENST00000615329.4@RPS6KC1	ENST00000615329.4	protein_coding	213051233,213071006,213077696,213104454,213117317,213129527,213167858,213176400,213240702,213242569,213261558,213262721,213272524	213051509,213071041,213077816,213104569,213117410,213129889,213167973,213176492,213242297,213242658,213261640,213262816,213273464	Gene ID= ENSG00000136643.11 TPM= 1.48 Transcript Type= protein_coding
chr1	214281020	214337130	214281020	214337130	+	transcript9666.chr1.nnic@SMYD2	transcript9666.chr1.nnic	protein_coding	214281020,214305187,214314762,214318079,214318859,214324641,214327622,214330168,214334200,214336704	214281427,214305250,214314872,214318139,214318983,214324708,214327724,214330278,214334308,214337130	Gene ID= ENSG00000143499.13 TPM= 6.76 Transcript Type= NA
chr1	214281233	214337131	214281233	214337131	+	ENST00000366957.9@SMYD2	ENST00000366957.9	protein_coding	214281233,214305187,214314762,214318079,214318859,214324641,214327622,214330168,214330950,214332018,214334200,214336704	214281427,214305250,214314872,214318139,214318983,214324708,214327724,214330278,214331070,214332192,214334308,214337131	Gene ID= ENSG00000143499.13 TPM= 80.12 Transcript Type= protein_coding
chr1	214281222	214337131	214281222	214337131	+	ENST00000460580.5@SMYD2	ENST00000460580.5	protein_coding	214281222,214314762,214318079,214318859,214324641,214327622,214330168,214330950,214332018,214334200,214336704	214281427,214314872,214318139,214318983,214324708,214327724,214330278,214331070,214332192,214334308,214337131	Gene ID= ENSG00000143499.13 TPM= 5.79 Transcript Type= processed_transcript
chr1	215567228	215608552	215567228	215608552	+	transcript9686.chr1.nic@KCTD3	transcript9686.chr1.nic	protein_coding	215567228,215573786,215574073,215575901,215577670,215578001,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017	215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608552	Gene ID= ENSG00000136636.12 TPM= 3.38 Transcript Type= NA
chr1	215567392	215621807	215567392	215621807	+	ENST00000259154.8@KCTD3	ENST00000259154.8	protein_coding	215567392,215573786,215574073,215575901,215577670,215578001,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017,215611825,215618886,215619153,215620057	215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608172,215611921,215619070,215619291,215621807	Gene ID= ENSG00000136636.12 TPM= 16.41 Transcript Type= protein_coding
chr1	217619922	217631087	217619922	217631087	-	transcript9693.chr1.nic@GPATCH2	transcript9693.chr1.nic	protein_coding	217630916,217619922	217631087,217620499	Gene ID= ENSG00000092978.10 TPM= 1.93 Transcript Type= NA
chr1	217426992	217631082	217426992	217631082	-	ENST00000366935.7@GPATCH2	ENST00000366935.7	protein_coding	217630916,217619783,217614141,217610889,217610321,217514822,217498356,217491680,217449249,217426992	217631082,217620499,217614202,217611071,217610400,217514889,217498395,217491750,217449337,217431365	Gene ID= ENSG00000092978.10 TPM= 6.76 Transcript Type= protein_coding
chr1	217608184	217631082	217608184	217631082	-	ENST00000366934.3@GPATCH2	ENST00000366934.3	protein_coding	217630916,217619783,217614141,217610889,217610321,217608184	217631082,217620499,217614202,217611071,217610400,217610192	Gene ID= ENSG00000092978.10 TPM= 2.9 Transcript Type= protein_coding
chr1	218285287	218337983	218285287	218337983	+	ENST00000366932.3@RRP15	ENST00000366932.3	protein_coding	218285287,218302294,218305028,218307431,218330948	218285455,218302559,218305125,218307632,218337983	Gene ID= ENSG00000067533.5 TPM= 66.61 Transcript Type= protein_coding
chr1	218344196	218346154	218344196	218346154	-	transcript9700.chr1.nnic@TGFB2-AS1	transcript9700.chr1.nnic	antisense_RNA	218346090,218345175,218344196	218346154,218345388,218344462	Gene ID= ENSG00000232480.1 TPM= 1.93 Transcript Type= NA
chr1	219173844	219212865	219173844	219212865	+	ENST00000366928.9@LYPLAL1	ENST00000366928.9	protein_coding	219173844,219179147,219193082,219210532,219211492	219173981,219179246,219193251,219210647,219212865	Gene ID= ENSG00000143353.11 TPM= 6.27 Transcript Type= protein_coding
chr1	219173896	219212865	219173896	219212865	+	ENST00000483635.5@LYPLAL1	ENST00000483635.5	protein_coding	219173896,219179147,219193082,219210532,219211492	219174304,219179246,219193251,219210647,219212865	Gene ID= ENSG00000143353.11 TPM= 2.9 Transcript Type= processed_transcript
chr1	219173895	219212865	219173895	219212865	+	ENST00000463964.5@LYPLAL1	ENST00000463964.5	protein_coding	219173895,219179147,219179400,219193082,219210532,219211492	219173981,219179246,219179426,219193251,219210647,219212865	Gene ID= ENSG00000143353.11 TPM= 1.45 Transcript Type= processed_transcript
chr1	219980151	220046506	219980151	220046506	-	transcript9713.chr1.nic@EPRS	transcript9713.chr1.nic	protein_coding	220046343,220040185,220034914,220033502,220032387,220030386,220025132,220024264,220022347,220019988,220018995,220018449,220010946,220007202,220006106,220005248,220001138,219996983,219988590,219987142,219984206,219983189,219982772,219981378,219980756,219980151	220046506,220040269,220035013,220033658,220032526,220030480,220025258,220024456,220022518,220020221,220019079,220018508,220011056,220007338,220006313,220005360,220001255,219997342,219988823,219987404,219984257,219983398,219982844,219981457,219980857,219980240	Gene ID= ENSG00000136628.17 TPM= 2.9 Transcript Type= NA
chr1	219968601	220046658	219968601	220046658	-	ENST00000366923.7@EPRS	ENST00000366923.7	protein_coding	220046343,220040185,220034914,220033502,220032387,220030386,220025132,220024264,220022347,220019988,220018995,220018449,220010946,220007202,220006106,220005248,220001138,219996983,219988590,219987142,219984206,219983189,219982772,219981378,219980756,219980085,219979418,219978546,219973238,219972069,219969058,219968601	220046658,220040269,220035013,220033658,220032526,220030480,220025258,220024456,220022518,220020221,220019079,220018508,220011056,220007338,220006313,220005360,220001255,219997342,219988823,219987404,219984257,219983398,219982844,219981457,219980857,219980240,219979615,219978719,219973398,219972147,219969122,219968956	Gene ID= ENSG00000136628.17 TPM= 22.2 Transcript Type= protein_coding
chr1	219987296	220046451	219987296	220046451	-	ENST00000609181.5@EPRS	ENST00000609181.5	protein_coding	220046343,220040185,220034914,220033502,220032387,220030386,220025132,220024264,220022347,220019988,220018995,220018449,220018126,220010946,220007202,220006106,220005248,220001138,219996983,219988590,219987296	220046451,220040269,220035013,220033658,220032526,220030480,220025258,220024456,220022518,220020221,220019079,220018508,220018146,220011056,220007338,220006313,220005360,220001255,219997342,219988823,219987404	Gene ID= ENSG00000136628.17 TPM= 49.23 Transcript Type= protein_coding
chr1	220094102	220148041	220094102	220148041	+	ENST00000366922.2@IARS2	ENST00000366922.2	protein_coding	220094102,220096104,220100490,220102129,220102363,220102495,220102687,220103447,220105891,220107061,220110786,220114314,220125237,220126750,220134402,220136809,220137918,220139008,220140183,220141803,220142944,220145509,220147493	220094483,220096226,220100649,220102277,220102412,220102604,220102777,220103562,220106060,220107151,220110937,220114474,220125339,220126843,220134510,220136911,220138043,220139139,220140289,220141948,220143134,220145653,220148041	Gene ID= ENSG00000067704.9 TPM= 174.72 Transcript Type= protein_coding
chr1	220150452	220272501	220150452	220272501	-	transcript9741.chr1.nnic@RAB3GAP2	transcript9741.chr1.nnic	protein_coding	220272223,220232799,220213856,220212887,220210955,220210801,220210388,220205907,220202276,220196250,220195298,220195078,220193240,220191068,220190377,220190064,220189703,220185651,220184036,220182714,220182257,220172637,220171889,220170892,220167502,220167293,220164733,220162198,220159386,220157802,220157270,220153968,220153185,220151606,220150452	220272501,220232863,220213979,220212968,220211002,220210876,220210489,220206006,220202374,220196398,220195377,220195167,220193379,220191284,220190520,220190146,220189767,220185741,220184163,220182931,220182354,220172742,220172049,220171120,220167675,220167399,220164799,220162268,220159421,220157876,220157488,220154057,220153406,220151764,220151406	Gene ID= ENSG00000118873.15 TPM= 18.82 Transcript Type= NA
chr1	220689845	220699157	220689845	220699157	+	ENST00000294889.5@C1orf115	ENST00000294889.5	protein_coding	220689845,220696612	220690711,220699157	Gene ID= ENSG00000162817.6 TPM= 21.24 Transcript Type= protein_coding
chr1	220748249	220759032	220748249	220759032	+	transcript9760.chr1.nic@MARC2	transcript9760.chr1.nic	protein_coding	220748249,220754947	220748803,220759032	Gene ID= ENSG00000117791.15 TPM= 2.9 Transcript Type= NA
chr1	220748334	220784815	220748334	220784815	+	ENST00000366913.7@MARC2	ENST00000366913.7	protein_coding	220748334,220754947,220761658,220762910,220780018,220780168,220781778,220783919	220748803,220755120,220761820,220763050,220780079,220780239,220781932,220784815	Gene ID= ENSG00000117791.15 TPM= 2.9 Transcript Type= protein_coding
chr1	220786759	220819657	220786759	220819657	+	ENST00000366910.9@MARC1	ENST00000366910.9	protein_coding	220786759,220791491,220796643,220797874,220805052,220805203,220813292	220787219,220791664,220796805,220798014,220805113,220805274,220819657	Gene ID= ENSG00000186205.12 TPM= 7.72 Transcript Type= protein_coding
chr1	220879400	220885059	220879400	220885059	+	ENST00000366903.7@HLX	ENST00000366903.7	protein_coding	220879400,220881194,220882164,220884195	220880449,220881373,220882348,220885059	Gene ID= ENSG00000136630.12 TPM= 19.31 Transcript Type= protein_coding
chr1	221701483	221736900	221701483	221736900	-	ENST00000468085.5@DUSP10	ENST00000468085.5	protein_coding	221736843,221706095,221701483	221736900,221706466,221702677	Gene ID= ENSG00000143507.17 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr1	222618097	222666142	222618097	222666142	+	transcript9778.chr1.nnic@MIA3	transcript9778.chr1.nnic	protein_coding	222618097,222621159,222624768,222627575,222632165,222633104,222645554,222648829,222650292,222650634,222650793,222651977,222652228,222653008,222653228,222654243,222654389,222654655,222658722,222659453,222659622,222659734,222659906,222660177,222662056,222662253,222662458,222663998,222665309	222618243,222621292,222624854,222630389,222632326,222633249,222645685,222648850,222650380,222650711,222650903,222652048,222652332,222653130,222653339,222654298,222654479,222654793,222658823,222659513,222659657,222659801,222660006,222660314,222662124,222662332,222662529,222664148,222666142	Gene ID= ENSG00000154305.16 TPM= 6.76 Transcript Type= NA
chr1	222644320	222666142	222644320	222666142	+	transcript9782.chr1.nnic@MIA3	transcript9782.chr1.nnic	protein_coding	222644320,222645554,222648829,222650292,222650634,222650793,222651977,222652228,222653008,222653228,222654243,222654389,222654655,222658722,222659453,222659622,222659734,222659906,222660177,222662056,222662253,222662458,222663998,222665309	222644586,222645685,222648850,222650380,222650711,222650903,222652048,222652332,222653130,222653339,222654298,222654479,222654793,222658823,222659513,222659657,222659801,222660006,222660314,222662124,222662332,222662529,222664148,222666142	Gene ID= ENSG00000154305.16 TPM= 2.9 Transcript Type= NA
chr1	222662070	222665219	222662070	222665219	+	transcript9786.chr1.nnic@NA	transcript9786.chr1.nnic	NA	222662070	222665219	Gene ID= novel_gene_chr1_9787 TPM= 17.38 Transcript Type= NA
chr1	222668013	222712524	222668013	222712524	-	ENST00000340020.10@AIDA	ENST00000340020.10	protein_coding	222712208,222703148,222694210,222693789,222687595,222686930,222676096,222673313,222670133,222668013	222712524,222703217,222694263,222693843,222687658,222687036,222676218,222673435,222670250,222669989	Gene ID= ENSG00000186063.12 TPM= 6.76 Transcript Type= protein_coding
chr1	222712828	222735196	222712828	222735196	+	transcript9798.chr1.nnic@BROX	transcript9798.chr1.nnic	protein_coding	222712828,222713588,222715684,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222731357,222732628	222712942,222713777,222715800,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222731516,222735196	Gene ID= ENSG00000162819.11 TPM= 6.18 Transcript Type= NA
chr1	222713321	222735196	222713321	222735196	+	transcript9800.chr1.nic@BROX	transcript9800.chr1.nic	protein_coding	222713321,222715684,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222731357,222732628	222713416,222715800,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222731516,222735196	Gene ID= ENSG00000162819.11 TPM= 13.9 Transcript Type= NA
chr1	222713321	222735196	222713321	222735196	+	ENST00000537020.5@BROX	ENST00000537020.5	protein_coding	222713321,222715684,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222732628	222713416,222715800,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222735196	Gene ID= ENSG00000162819.11 TPM= 4.25 Transcript Type= protein_coding
chr1	222713325	222735196	222713325	222735196	+	transcript9805.chr1.nnic@BROX	transcript9805.chr1.nnic	protein_coding	222713325,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222731357,222732628	222713416,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222731516,222735196	Gene ID= ENSG00000162819.11 TPM= 5.21 Transcript Type= NA
chr1	222712553	222735196	222712553	222735196	+	ENST00000340934.9@BROX	ENST00000340934.9	protein_coding	222712553,222715684,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222731357,222732628	222712942,222715800,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222731516,222735196	Gene ID= ENSG00000162819.11 TPM= 11 Transcript Type= protein_coding
chr1	223712332	223776018	223712332	223776018	+	ENST00000295006.5@CAPN2	ENST00000295006.5	protein_coding	223712332,223717762,223744100,223745306,223746997,223749039,223750890,223751997,223752796,223755480,223757369,223759270,223761581,223762186,223764150,223766367,223769841,223770447,223771809,223772181,223774834	223712877,223717831,223744218,223745439,223747165,223749122,223750975,223752071,223752956,223755649,223757380,223759481,223761617,223762251,223764207,223766431,223769909,223770525,223771925,223772239,223776018	Gene ID= ENSG00000162909.17 TPM= 301.18 Transcript Type= protein_coding
chr1	223779899	223845972	223779899	223845972	-	ENST00000343537.11@TP53BP2	ENST00000343537.11	protein_coding	223845654,223821220,223814240,223810431,223806846,223804174,223803271,223802731,223802116,223800700,223799899,223798215,223795815,223793303,223792389,223789008,223784115,223779899	223845972,223821367,223814353,223810513,223806947,223804348,223803452,223802895,223802344,223800810,223800047,223798677,223796590,223793440,223792522,223789174,223784314,223780894	Gene ID= ENSG00000143514.16 TPM= 9.65 Transcript Type= protein_coding
chr1	223846013	223846709	223846013	223846709	+	transcript9834.chr1.nnic@NA	transcript9834.chr1.nnic	NA	223846013	223846709	Gene ID= novel_gene_chr1_9835 TPM= 13.51 Transcript Type= NA
chr1	223951414	223992602	223951414	223992602	-	transcript9837.chr1.nnic@GTF2IP20	transcript9837.chr1.nnic	transcribed_unprocessed_pseudogene	223992515,223988045,223986575,223984382,223982758,223976880,223973982,223971574,223964592,223962611,223962083,223961170,223954477,223952668,223952385,223951414	223992602,223988154,223986640,223984440,223983285,223977117,223974046,223971763,223964709,223962712,223962273,223961238,223954669,223952870,223952442,223952291	Gene ID= ENSG00000272645.3 TPM= 1.93 Transcript Type= NA
chr1	223992754	224010606	223992754	224010606	+	transcript9847.chr1.nic@AC138393.1	transcript9847.chr1.nic	transcribed_unprocessed_pseudogene	223992754,224003520,224009320	223993047,224003654,224010606	Gene ID= ENSG00000185495.10 TPM= 8.69 Transcript Type= NA
chr1	224114087	224162047	224114087	224162047	+	ENST00000366862.9@FBXO28	ENST00000366862.9	protein_coding	224114087,224130472,224134074,224153142,224157352	224114396,224130581,224134212,224153337,224162047	Gene ID= ENSG00000143756.11 TPM= 12.55 Transcript Type= protein_coding
chr1	224183171	224193441	224183171	224193441	+	ENST00000323699.8@DEGS1	ENST00000323699.8	protein_coding	224183171,224189577,224192332	224183418,224190319,224193441	Gene ID= ENSG00000143753.12 TPM= 12.55 Transcript Type= protein_coding
chr1	224227337	224330189	224227337	224330189	-	ENST00000482491.5@NVL	ENST00000482491.5	protein_coding	224330071,224326391,224317878,224317694,224311800,224307991,224305034,224304736,224303723,224301691,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227337	224330189,224326464,224317930,224317793,224311857,224308263,224305166,224304812,224303857,224301771,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670	Gene ID= ENSG00000143748.17 TPM= 1.45 Transcript Type= protein_coding
chr1	224227337	224330172	224227337	224330172	-	transcript9867.chr1.nic@NVL	transcript9867.chr1.nic	protein_coding	224330071,224326391,224317878,224317694,224311800,224307991,224305034,224304736,224303723,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227337	224330172,224326464,224317930,224317793,224313155,224308263,224305166,224304812,224303857,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670	Gene ID= ENSG00000143748.17 TPM= 2.41 Transcript Type= NA
chr1	224356850	224379452	224356850	224379452	+	ENST00000465271.5@CNIH4	ENST00000465271.5	protein_coding	224356850,224360495,224365879,224371283,224375795	224356993,224360563,224365991,224371423,224379452	Gene ID= ENSG00000143771.11 TPM= 13.51 Transcript Type= protein_coding
chr1	224356891	224375991	224356891	224375991	+	transcript9884.chr1.nnic@CNIH4	transcript9884.chr1.nnic	protein_coding	224356891,224364109,224365879,224375795	224356993,224364265,224365991,224375991	Gene ID= ENSG00000143771.11 TPM= 1.93 Transcript Type= NA
chr1	224356871	224379452	224356871	224379452	+	ENST00000366857.9@CNIH4	ENST00000366857.9	protein_coding	224356871,224360495,224365879,224375795	224356993,224360563,224365991,224379452	Gene ID= ENSG00000143771.11 TPM= 3.86 Transcript Type= protein_coding
chr1	224389136	224434459	224389136	224434459	-	transcript9894.chr1.nic@WDR26	transcript9894.chr1.nic	protein_coding	224433684,224431682,224431525,224424518,224419518,224418260,224411427,224404430,224400950,224398889,224398515,224398097,224393828,224389136	224434459,224431781,224431581,224424654,224419615,224418416,224411565,224404570,224401069,224399034,224398593,224398226,224394013,224389860	Gene ID= ENSG00000162923.14 TPM= 17.38 Transcript Type= NA
chr1	224385143	224434299	224385143	224434299	-	ENST00000414423.6@WDR26	ENST00000414423.6	protein_coding	224433684,224431682,224431477,224424518,224419518,224418260,224411427,224404430,224400950,224398889,224398515,224398097,224393828,224385143	224434299,224431781,224431581,224424654,224419615,224418416,224411565,224404570,224401069,224399034,224398593,224398226,224394013,224389860	Gene ID= ENSG00000162923.14 TPM= 11.58 Transcript Type= protein_coding
chr1	224434577	224740549	224434577	224740549	+	transcript9898.chr1.nnic@CNIH3	transcript9898.chr1.nnic	protein_coding	224434577,224515741,224566199,224680958,224684796,224730462,224734563,224739329	224434862,224515876,224566264,224681026,224684843,224730574,224734706,224740549	Gene ID= ENSG00000143786.7 TPM= 2.41 Transcript Type= NA
chr1	224616293	224740549	224616293	224740549	+	ENST00000272133.3@CNIH3	ENST00000272133.3	protein_coding	224616293,224680958,224684796,224730462,224734563,224739329	224617255,224681026,224684843,224730574,224734706,224740549	Gene ID= ENSG00000143786.7 TPM= 1.45 Transcript Type= protein_coding
chr1	225401503	225428855	225401503	225428855	-	ENST00000338179.6@LBR	ENST00000338179.6	protein_coding	225428706,225423911,225422077,225419715,225419263,225417984,225415278,225412454,225411337,225410291,225406664,225404626,225404404,225401503	225428855,225424089,225422277,225419798,225419452,225418180,225415332,225412645,225411440,225410416,225406832,225404706,225404526,225403463	Gene ID= ENSG00000143815.14 TPM= 3.21 Transcript Type= protein_coding
chr1	225401503	225428114	225401503	225428114	-	transcript9911.chr1.nnic@LBR	transcript9911.chr1.nnic	protein_coding	225427954,225423911,225422077,225419715,225419263,225417984,225415278,225412454,225411337,225406664,225404626,225404404,225401503	225428114,225424089,225422277,225419798,225419452,225418180,225415332,225412645,225411440,225406832,225404706,225404526,225403463	Gene ID= ENSG00000143815.14 TPM= 2.25 Transcript Type= NA
chr1	225401502	225428035	225401502	225428035	-	ENST00000272163.8@LBR	ENST00000272163.8	protein_coding	225427954,225423911,225422077,225419715,225419263,225417984,225415278,225412454,225411337,225410291,225406664,225404626,225404404,225401502	225428035,225424089,225422277,225419798,225419452,225418180,225415332,225412645,225411440,225410416,225406832,225404706,225404526,225403463	Gene ID= ENSG00000143815.14 TPM= 20.59 Transcript Type= protein_coding
chr1	225486835	225653142	225486835	225653142	-	ENST00000366844.7@ENAH	ENST00000366844.7	protein_coding	225652686,225567249,225554906,225530554,225519198,225517196,225514596,225512871,225512657,225511811,225507951,225504991,225500992,225498347,225486835	225653142,225567414,225555083,225530638,225519565,225517306,225514900,225513016,225512714,225511859,225508017,225505053,225501070,225498404,225497812	Gene ID= ENSG00000154380.17 TPM= 22.2 Transcript Type= protein_coding
chr1	225650373	225653123	225650373	225653123	-	transcript9926.chr1.nnic@ENAH	transcript9926.chr1.nnic	protein_coding	225652686,225652318,225650373	225653123,225652433,225651786	Gene ID= ENSG00000154380.17 TPM= 9.65 Transcript Type= NA
chr1	225700669	225716410	225700669	225716410	+	transcript9933.chr1.nnic@AC099066.2	transcript9933.chr1.nnic	antisense_RNA	225700669,225710503,225716046	225701106,225710568,225716410	Gene ID= ENSG00000227496.1 TPM= 11.58 Transcript Type= NA
chr1	225777810	225790462	225777810	225790462	+	transcript9946.chr1.nnic@SRP9	transcript9946.chr1.nnic	protein_coding	225777810,225783300,225789259	225778012,225783368,225790462	Gene ID= ENSG00000143742.12 TPM= 9.41 Transcript Type= NA
chr1	225777829	225790466	225777829	225790466	+	ENST00000304786.11@SRP9	ENST00000304786.11	protein_coding	225777829,225783300,225789240	225778012,225783368,225790466	Gene ID= ENSG00000143742.12 TPM= 179.31 Transcript Type= protein_coding
chr1	225777837	225790466	225777837	225790466	+	ENST00000366839.8@SRP9	ENST00000366839.8	protein_coding	225777837,225783300,225786862,225789240	225778012,225783368,225786985,225790466	Gene ID= ENSG00000143742.12 TPM= 37.41 Transcript Type= protein_coding
chr1	225810095	225845559	225810095	225845559	+	ENST00000272167.9@EPHX1	ENST00000272167.9	protein_coding	225810095,225828725,225831779,225838654,225839217,225839829,225842366,225844498,225845146	225810169,225828912,225831959,225838881,225839346,225840037,225842474,225844623,225845559	Gene ID= ENSG00000143819.12 TPM= 19.79 Transcript Type= protein_coding
chr1	225810412	225845559	225810412	225845559	+	ENST00000614058.4@EPHX1	ENST00000614058.4	protein_coding	225810412,225828725,225831779,225838654,225839217,225839829,225842366,225844498,225845146	225810615,225828912,225831959,225838881,225839346,225840037,225842474,225844623,225845559	Gene ID= ENSG00000143819.12 TPM= 3.38 Transcript Type= protein_coding
chr1	225919877	225924340	225919877	225924340	-	ENST00000612039.4@PYCR2	ENST00000612039.4	protein_coding	225924044,225923701,225922204,225921552,225921208,225919877	225924340,225923771,225922383,225921644,225921371,225920620	Gene ID= ENSG00000143811.18 TPM= 10.14 Transcript Type= protein_coding
chr1	225919878	225924259	225919878	225924259	-	ENST00000343818.10@PYCR2	ENST00000343818.10	protein_coding	225924044,225923701,225922204,225921858,225921552,225921208,225919878	225924259,225923771,225922383,225922079,225921644,225921371,225920620	Gene ID= ENSG00000143811.18 TPM= 56.47 Transcript Type= protein_coding
chr1	225982702	225999331	225982702	225999331	-	ENST00000272091.7@SDE2	ENST00000272091.7	protein_coding	225999193,225995266,225992891,225992398,225991243,225987896,225982702	225999331,225995383,225993002,225992567,225991363,225988388,225985523	Gene ID= ENSG00000143751.9 TPM= 33.79 Transcript Type= protein_coding
chr1	226062678	226071999	226062678	226071999	+	ENST00000366815.7@H3F3A	ENST00000366815.7	protein_coding	226062678,226064329,226065656,226071351	226062811,226064479,226065809,226071999	Gene ID= ENSG00000163041.9 TPM= 219.13 Transcript Type= protein_coding
chr1	226144679	226186730	226144679	226186730	-	ENST00000366812.5@ACBD3	ENST00000366812.5	protein_coding	226186390,226165859,226164789,226161531,226159184,226154647,226152335,226144679	226186730,226166000,226164929,226161689,226159358,226154833,226152619,226146821	Gene ID= ENSG00000182827.8 TPM= 44.4 Transcript Type= protein_coding
chr1	226388698	226408155	226388698	226408155	-	transcript9988.chr1.nic@PARP1	transcript9988.chr1.nic	protein_coding	226407810,226402214,226392199,226390410,226388698	226408155,226402379,226392314,226390624,226388755	Gene ID= ENSG00000143799.12 TPM= 16.41 Transcript Type= NA
chr1	226360691	226408073	226360691	226408073	-	ENST00000366794.9@PARP1	ENST00000366794.9	protein_coding	226407810,226402214,226392199,226390410,226388656,226386326,226385504,226383036,226381068,226379922,226379573,226379142,226377108,226374226,226370434,226368199,226367480,226365954,226365002,226363943,226363099,226361969,226360691	226408073,226402379,226392314,226390624,226388755,226386442,226385680,226383183,226381208,226380164,226379641,226379274,226377303,226374354,226370517,226368321,226367608,226366052,226365154,226364070,226363160,226362083,226361541	Gene ID= ENSG00000143799.12 TPM= 47.3 Transcript Type= protein_coding
chr1	226641182	226739345	226641182	226739345	-	transcript9992.chr1.nic@ITPKB	transcript9992.chr1.nic	protein_coding	226739041,226735527,226648672,226647167,226641182	226739345,226737663,226648771,226647380,226642125	Gene ID= ENSG00000143772.9 TPM= 4.83 Transcript Type= NA
chr1	226870440	226896098	226870440	226896098	+	transcript9996.chr1.nic@PSEN2	transcript9996.chr1.nic	protein_coding	226870440,226871262,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891743,226894007,226895424	226870505,226871404,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226896098	Gene ID= ENSG00000143801.16 TPM= 7.53 Transcript Type= NA
chr1	226870708	226896098	226870708	226896098	+	transcript9997.chr1.nnic@PSEN2	transcript9997.chr1.nnic	protein_coding	226870708,226875365,226881888,226883705,226885538,226888091,226888829,226889758,226890035,226891278,226891743,226894007,226895424	226871404,226875550,226882048,226883919,226885679,226888158,226889049,226889926,226890133,226891361,226891844,226894125,226896098	Gene ID= ENSG00000143801.16 TPM= 2.7 Transcript Type= NA
chr1	226870430	226896098	226870430	226896098	+	transcript9998.chr1.nnic@PSEN2	transcript9998.chr1.nnic	protein_coding	226870430,226871262,226875365,226881888,226883705,226885538,226888091,226888829,226891278,226891743,226894007,226895424	226870649,226871404,226875550,226882048,226883919,226885679,226888158,226889049,226891361,226891844,226894125,226896098	Gene ID= ENSG00000143801.16 TPM= 3.67 Transcript Type= NA
chr1	226870613	226896098	226870613	226896098	+	transcript9999.chr1.nic@PSEN2	transcript9999.chr1.nic	protein_coding	226870613,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891743,226894007,226895424	226870649,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226896098	Gene ID= ENSG00000143801.16 TPM= 7.53 Transcript Type= NA
chr1	226870643	226896098	226870643	226896098	+	transcript10000.chr1.nic@PSEN2	transcript10000.chr1.nic	protein_coding	226870643,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891743,226894007,226895424	226871404,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226896098	Gene ID= ENSG00000143801.16 TPM= 39.38 Transcript Type= NA
chr1	226940288	226987544	226940288	226987544	+	ENST00000366777.3@COQ8A	ENST00000366777.3	protein_coding	226940288,226961377,226965000,226965671,226977449,226982027,226982678,226982894,226983552,226983761,226984094,226984548,226984876,226985254,226986453	226940399,226961562,226965410,226965737,226977523,226982149,226982763,226983034,226983633,226983854,226984235,226984655,226984941,226985340,226987544	Gene ID= ENSG00000163050.16 TPM= 2655.56 Transcript Type= protein_coding
chr1	227129149	227318713	227129149	227318713	-	transcript10103.chr1.nic@CDC42BPA	transcript10103.chr1.nic	protein_coding	227317005,227254064,227213136,227199557,227193786,227160543,227147359,227145489,227142945,227139576,227129149	227318713,227254155,227213219,227199652,227193934,227160636,227147559,227145737,227143024,227139742,227129231	Gene ID= ENSG00000143776.18 TPM= 11.58 Transcript Type= NA
chr1	227013397	227015539	227013397	227015539	-	transcript10104.chr1.nnic@NA	transcript10104.chr1.nnic	NA	227013397	227015539	Gene ID= novel_gene_chr1_10105 TPM= 1.93 Transcript Type= NA
chr1	227735428	227770737	227735428	227770737	+	transcript10111.chr1.nnic@SNAP47	transcript10111.chr1.nnic	protein_coding	227735428,227747692,227758995,227766959,227768249,227770571	227735499,227748233,227759485,227767083,227768364,227770737	Gene ID= ENSG00000143740.14 TPM= 5.79 Transcript Type= NA
chr1	227735428	227781226	227735428	227781226	+	transcript10112.chr1.nnic@SNAP47	transcript10112.chr1.nnic	protein_coding	227735428,227747692,227758995,227766959,227768249,227780527	227735499,227748233,227759485,227767083,227768364,227781226	Gene ID= ENSG00000143740.14 TPM= 21.24 Transcript Type= NA
chr1	227735428	227768498	227735428	227768498	+	transcript10125.chr1.nnic@SNAP47	transcript10125.chr1.nnic	protein_coding	227735428,227747692,227758995,227766959,227768249	227735499,227748233,227759485,227767083,227768498	Gene ID= ENSG00000143740.14 TPM= 3.86 Transcript Type= NA
chr1	227731224	227735321	227731224	227735321	-	transcript10114.chr1.nnic@JMJD4	transcript10114.chr1.nnic	protein_coding	227735012,227734651,227733907,227733414,227732881,227731224	227735321,227734816,227734032,227733681,227732955,227732676	Gene ID= ENSG00000081692.12 TPM= 2.49 Transcript Type= NA
chr1	227731234	227735411	227731234	227735411	-	ENST00000438896.2@JMJD4	ENST00000438896.2	protein_coding	227735012,227734651,227733907,227733414,227732929,227731234	227735411,227734816,227734032,227733681,227733027,227732676	Gene ID= ENSG00000081692.12 TPM= 2.17 Transcript Type= protein_coding
chr1	227731224	227735374	227731224	227735374	-	transcript10130.chr1.nic@JMJD4	transcript10130.chr1.nic	protein_coding	227734651,227733907,227733414,227732881,227731224	227735374,227734032,227733681,227733027,227732676	Gene ID= ENSG00000081692.12 TPM= 5.39 Transcript Type= NA
chr1	227730425	227734377	227730425	227734377	-	ENST00000485807.1@JMJD4	ENST00000485807.1	protein_coding	227732881,227730425	227734377,227732676	Gene ID= ENSG00000081692.12 TPM= 11.58 Transcript Type= retained_intron
chr1	227731224	227735283	227731224	227735283	-	ENST00000620518.4@JMJD4	ENST00000620518.4	protein_coding	227735012,227734651,227733907,227733414,227732881,227731224	227735283,227734816,227734032,227733681,227733027,227732676	Gene ID= ENSG00000081692.12 TPM= 18.9 Transcript Type= protein_coding
chr1	227918656	227947898	227918656	227947898	-	ENST00000272164.5@WNT9A	ENST00000272164.5	protein_coding	227947793,227925263,227924138,227918656	227947898,227925519,227924400,227922000	Gene ID= ENSG00000143816.7 TPM= 9.65 Transcript Type= protein_coding
chr1	227946667	227947932	227946667	227947932	-	transcript10148.chr1.nnic@NA	transcript10148.chr1.nnic	NA	227946667	227947932	Gene ID= novel_gene_chr1_10149 TPM= 3.86 Transcript Type= NA
chr1	227946875	227947303	227946875	227947303	+	transcript10146.chr1.nnic@NA	transcript10146.chr1.nnic	NA	227946875	227947303	Gene ID= novel_gene_chr1_10147 TPM= 1.93 Transcript Type= NA
chr1	228082660	228099211	228082660	228099211	+	ENST00000540651.5@ARF1	ENST00000540651.5	protein_coding	228082660,228097078,228097342,228097591,228097852	228082850,228097262,228097452,228097715,228099211	Gene ID= ENSG00000143761.15 TPM= 41.51 Transcript Type= protein_coding
chr1	228082660	228099212	228082660	228099212	+	ENST00000272102.9@ARF1	ENST00000272102.9	protein_coding	228082660,228097078,228097342,228097591,228097852	228082765,228097262,228097452,228097715,228099212	Gene ID= ENSG00000143761.15 TPM= 538.64 Transcript Type= protein_coding
chr1	228100731	228103462	228100731	228103462	-	ENST00000272139.4@C1orf35	ENST00000272139.4	protein_coding	228103134,228102899,228102643,228102478,228102310,228102080,228101339,228100731	228103462,228103049,228102688,228102560,228102382,228102165,228101473,228101254	Gene ID= ENSG00000143793.12 TPM= 8.69 Transcript Type= protein_coding
chr1	228101413	228103332	228101413	228103332	-	transcript10154.chr1.nic@C1orf35	transcript10154.chr1.nic	protein_coding	228103134,228102899,228102643,228102478,228102080,228101413	228103332,228103049,228102688,228102560,228102382,228101473	Gene ID= ENSG00000143793.12 TPM= 1.93 Transcript Type= NA
chr1	228100731	228103320	228100731	228103320	-	ENST00000485896.5@C1orf35	ENST00000485896.5	protein_coding	228103134,228102899,228102643,228102478,228102080,228101339,228100731	228103320,228103049,228102688,228102560,228102382,228101473,228101254	Gene ID= ENSG00000143793.12 TPM= 1.93 Transcript Type= processed_transcript
chr1	228106679	228109306	228106679	228109306	-	ENST00000336300.9@MRPL55	ENST00000336300.9	protein_coding	228109149,228108437,228108235,228107668,228106679	228109306,228108474,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 2.58 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000366747.7@MRPL55	ENST00000366747.7	protein_coding	228109261,228108437,228108235,228107668,228106679	228109299,228108474,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 3.54 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000295008.8@MRPL55	ENST00000295008.8	protein_coding	228109261,228108955,228108235,228107668,228106679	228109299,228109021,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 6.44 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000366746.7@MRPL55	ENST00000366746.7	protein_coding	228109261,228108235,228107668,228106679	228109299,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 6.44 Transcript Type= protein_coding
chr1	228106679	228109283	228106679	228109283	-	ENST00000348259.9@MRPL55	ENST00000348259.9	protein_coding	228109149,228108235,228107668,228106679	228109283,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 12.23 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000336520.7@MRPL55	ENST00000336520.7	protein_coding	228109149,228108955,228108235,228107668,228106679	228109299,228109021,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 7.4 Transcript Type= protein_coding
chr1	228140241	228148946	228140241	228148946	+	transcript10179.chr1.nic@GUK1	transcript10179.chr1.nic	protein_coding	228140241,228141124,228141626,228145511,228146026,228146842,228147406,228147615,228148371,228148665	228140363,228141288,228141829,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 43.08 Transcript Type= NA
chr1	228140241	228148946	228140241	228148946	+	transcript10188.chr1.nic@GUK1	transcript10188.chr1.nic	protein_coding	228140241,228141124,228145511,228146026,228146842,228147406,228147615,228148371,228148665	228140363,228141829,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 23.78 Transcript Type= NA
chr1	228140228	228148955	228140228	228148955	+	ENST00000391865.7@GUK1	ENST00000391865.7	protein_coding	228140228,228145511,228146026,228146842,228147406,228147615,228148371,228148665	228140363,228145624,228146067,228146938,228147544,228147699,228148456,228148955	Gene ID= ENSG00000143774.16 TPM= 99.01 Transcript Type= protein_coding
chr1	228140290	228148946	228140290	228148946	+	ENST00000312726.8@GUK1	ENST00000312726.8	protein_coding	228140290,228141124,228145511,228146026,228146842,228147406,228147615,228148371,228148665	228140363,228141288,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 86.11 Transcript Type= protein_coding
chr1	228140290	228148955	228140290	228148955	+	ENST00000366728.6@GUK1	ENST00000366728.6	protein_coding	228140290,228145511,228146026,228146842,228147406,228147615,228148665	228140363,228145624,228146067,228146938,228147544,228147699,228148955	Gene ID= ENSG00000143774.16 TPM= 8.27 Transcript Type= protein_coding
chr1	228140290	228148946	228140290	228148946	+	ENST00000492871.5@GUK1	ENST00000492871.5	protein_coding	228140290,228141124,228145511,228146026,228146861,228147406,228147615,228148371,228148665	228140363,228141288,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 15.26 Transcript Type= processed_transcript
chr1	228175161	228178586	228175161	228178586	+	transcript10209.chr1.nnic@NA	transcript10209.chr1.nnic	NA	228175161	228178586	Gene ID= novel_gene_chr1_10210 TPM= 7.72 Transcript Type= NA
chr1	228333206	228361250	228333206	228361250	+	transcript10214.chr1.nnic@OBSCN	transcript10214.chr1.nnic	protein_coding	228333206,228333502,228334512,228334815,228335080,228335791,228336200,228337004,228337244,228337944,228338290,228338853,228339945,228340506,228340724,228341095,228341437,228342119,228349890,228350841,228351321,228352951,228356151,228359597	228333323,228333780,228334544,228334913,228335298,228335851,228336270,228337126,228337383,228338144,228338372,228339026,228340101,228340622,228340888,228341253,228341614,228342232,228350057,228350943,228351450,228353062,228356193,228361250	Gene ID= ENSG00000154358.20 TPM= 1114.93 Transcript Type= NA
chr1	228215216	228217425	228215216	228217425	+	transcript10307.chr1.nnic@NA	transcript10307.chr1.nnic	NA	228215216	228217425	Gene ID= novel_gene_chr1_10308 TPM= 4.83 Transcript Type= NA
chr1	228393676	228406840	228393676	228406840	-	ENST00000284551.10@TRIM11	ENST00000284551.10	protein_coding	228406154,228402066,228400964,228397143,228396947,228393676	228406840,228402161,228401194,228397165,228397047,228395252	Gene ID= ENSG00000154370.15 TPM= 25.1 Transcript Type= protein_coding
chr1	228487061	228495766	228487061	228495766	+	ENST00000305943.7@RNF187	ENST00000305943.7	protein_coding	228487061,228488960,228493053,228493883	228487878,228489052,228493274,228495766	Gene ID= ENSG00000168159.11 TPM= 427.63 Transcript Type= protein_coding
chr1	228735077	228746669	228735077	228746669	+	ENST00000366691.3@RHOU	ENST00000366691.3	protein_coding	228735077,228737673,228743285	228736004,228737731,228746669	Gene ID= ENSG00000116574.5 TPM= 190.65 Transcript Type= protein_coding
chr1	228735474	228746662	228735474	228746662	+	transcript10325.chr1.nnic@RHOU	transcript10325.chr1.nnic	protein_coding	228735474,228743285	228736004,228746662	Gene ID= ENSG00000116574.5 TPM= 9.17 Transcript Type= NA
chr1	229263933	229271044	229263933	229271044	-	transcript10328.chr1.nnic@AL162595.1	transcript10328.chr1.nnic	bidirectional_promoter_lncRNA	229270976,229267906,229263933	229271044,229269627,229264912	Gene ID= ENSG00000177788.5 TPM= 2.9 Transcript Type= NA
chr1	229263936	229271044	229263936	229271044	-	transcript10330.chr1.nnic@AL162595.1	transcript10330.chr1.nnic	bidirectional_promoter_lncRNA	229270976,229267958,229263936	229271044,229269627,229264908	Gene ID= ENSG00000177788.5 TPM= 2.9 Transcript Type= NA
chr1	229271111	229304404	229271111	229304404	+	transcript10339.chr1.nic@RAB4A	transcript10339.chr1.nic	protein_coding	229271111,229286486,229288729,229295848,229297520,229298977,229302862,229303806	229271370,229286566,229288843,229295910,229297636,229299072,229302989,229304404	Gene ID= ENSG00000168118.11 TPM= 9.65 Transcript Type= NA
chr1	229271168	229305504	229271168	229305504	+	transcript10344.chr1.nnic@RAB4A	transcript10344.chr1.nnic	protein_coding	229271168,229286486,229295848,229297520,229298977,229302862,229303806	229271370,229286566,229295910,229297636,229299072,229302989,229305504	Gene ID= ENSG00000168118.11 TPM= 2.9 Transcript Type= NA
chr1	229271062	229305891	229271062	229305891	+	ENST00000618010.4@RAB4A	ENST00000618010.4	protein_coding	229271062,229295848,229297520,229298977,229302862,229303806	229271370,229295910,229297636,229299072,229302989,229305891	Gene ID= ENSG00000168118.11 TPM= 3.86 Transcript Type= protein_coding
chr1	229431245	229434094	229431245	229434094	-	ENST00000366684.7@ACTA1	ENST00000366684.7	protein_coding	229434004,229432987,229432556,229432270,229431994,229431721,229431245	229434094,229433127,229432880,229432431,229432185,229431902,229431642	Gene ID= ENSG00000143632.14 TPM= 23567.65 Transcript Type= protein_coding
chr1	229516582	229558707	229516582	229558707	-	transcript10437.chr1.nnic@ABCB10	transcript10437.chr1.nnic	protein_coding	229558136,229549234,229547499,229542237,229540606,229539456,229538814,229531636,229530199,229527229,229525936,229521592,229518841,229516582	229558707,229549434,229547701,229542371,229540752,229539591,229538907,229531731,229530408,229527308,229526116,229521635,229518875,229518410	Gene ID= ENSG00000135776.4 TPM= 1.93 Transcript Type= NA
chr1	229516582	229558769	229516582	229558769	-	transcript10444.chr1.nnic@ABCB10	transcript10444.chr1.nnic	protein_coding	229558136,229549234,229547499,229542237,229540606,229539456,229531636,229530199,229527229,229525936,229518841,229516582	229558769,229549434,229547701,229542371,229540752,229539591,229531731,229530408,229527308,229526116,229518875,229518410	Gene ID= ENSG00000135776.4 TPM= 2.9 Transcript Type= NA
chr1	229516582	229558695	229516582	229558695	-	ENST00000344517.4@ABCB10	ENST00000344517.4	protein_coding	229558136,229549234,229547499,229542237,229540606,229539456,229531636,229530199,229527229,229525936,229521592,229518841,229516582	229558695,229549434,229547701,229542371,229540752,229539591,229531731,229530408,229527308,229526116,229521635,229518875,229518410	Gene ID= ENSG00000135776.4 TPM= 26.06 Transcript Type= protein_coding
chr1	229626199	229659576	229626199	229659576	+	transcript10458.chr1.nnic@URB2	transcript10458.chr1.nnic	protein_coding	229626199,229627590,229632269,229634917,229643533,229647510,229651235,229654249,229659100	229626356,229627759,229632445,229638247,229643693,229647752,229651322,229654388,229659576	Gene ID= ENSG00000135763.9 TPM= 1.93 Transcript Type= NA
chr1	229626234	229660199	229626234	229660199	+	ENST00000258243.6@URB2	ENST00000258243.6	protein_coding	229626234,229627621,229632269,229634917,229643533,229645859,229647510,229651235,229654249,229659100	229626356,229627759,229632445,229638247,229643693,229645969,229647752,229651322,229654388,229660199	Gene ID= ENSG00000135763.9 TPM= 3.86 Transcript Type= protein_coding
chr1	230067209	230282124	230067209	230282124	+	ENST00000366672.4@GALNT2	ENST00000366672.4	protein_coding	230067209,230178218,230203137,230236014,230236353,230236660,230243306,230246063,230249184,230250457,230255218,230262573,230262922,230265241,230274445,230279303	230067406,230178311,230203290,230236112,230236420,230236725,230243427,230246150,230249271,230250560,230255344,230262665,230263005,230265367,230274564,230282124	Gene ID= ENSG00000143641.9 TPM= 99.43 Transcript Type= protein_coding
chr1	230067361	230069711	230067361	230069711	+	transcript10477.chr1.nnic@NA	transcript10477.chr1.nnic	NA	230067361	230069711	Gene ID= novel_gene_chr1_10478 TPM= 2.9 Transcript Type= NA
chr1	230642460	230693731	230642460	230693731	+	transcript10482.chr1.nnic@COG2	transcript10482.chr1.nnic	protein_coding	230642460,230659464,230660758,230663141,230664484,230668676,230669356,230671516,230674998,230678913,230683574,230685085,230686935,230688071,230688420,230690014,230691384,230693292	230642678,230659625,230660823,230663221,230664587,230668784,230669535,230671640,230675124,230679052,230683635,230685236,230687132,230688143,230688562,230690153,230691543,230693731	Gene ID= ENSG00000135775.13 TPM= 1.93 Transcript Type= NA
chr1	230642460	230693982	230642460	230693982	+	transcript10487.chr1.nnic@COG2	transcript10487.chr1.nnic	protein_coding	230642460,230659464,230660758,230663141,230664484,230668676,230671516,230674998,230678913,230683574,230685085,230686935,230688071,230688420,230690014,230691384,230693292	230642678,230659625,230660823,230663221,230664587,230668784,230671640,230675124,230679052,230683635,230685236,230687132,230688143,230688562,230690153,230691564,230693982	Gene ID= ENSG00000135775.13 TPM= 3.86 Transcript Type= NA
chr1	230702523	230714297	230702523	230714297	-	ENST00000366667.4@AGT	ENST00000366667.4	protein_coding	230714086,230709995,230705933,230704193,230702523	230714297,230710853,230706200,230704337,230703329	Gene ID= ENSG00000135744.7 TPM= 27.03 Transcript Type= protein_coding
chr1	230837119	230869589	230837119	230869589	-	ENST00000470540.5@C1orf198	ENST00000470540.5	protein_coding	230869482,230868812,230868180,230855668,230843354,230837119	230869589,230868915,230868402,230855718,230843896,230839908	Gene ID= ENSG00000119280.16 TPM= 38.93 Transcript Type= protein_coding
chr1	230837119	230868653	230837119	230868653	-	ENST00000366663.9@C1orf198	ENST00000366663.9	protein_coding	230868180,230855668,230843354,230837119	230868653,230855718,230843896,230839908	Gene ID= ENSG00000119280.16 TPM= 193.86 Transcript Type= protein_coding
chr1	230906243	230978848	230906243	230978848	-	transcript10508.chr1.nnic@TTC13	transcript10508.chr1.nnic	protein_coding	230978560,230961209,230958224,230954333,230945389,230940440,230939386,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243	230978848,230961303,230958299,230954403,230945454,230940556,230939496,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916302,230912758,230911549,230909020,230908791,230907019	Gene ID= ENSG00000143643.12 TPM= 3.14 Transcript Type= NA
chr1	230906243	230978861	230906243	230978861	-	transcript10511.chr1.nic@TTC13	transcript10511.chr1.nic	protein_coding	230978560,230961209,230958224,230954333,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243	230978861,230961303,230958299,230954403,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916302,230912758,230911549,230909020,230908791,230907019	Gene ID= ENSG00000143643.12 TPM= 3.14 Transcript Type= NA
chr1	230943240	230978916	230943240	230978916	-	transcript10518.chr1.nic@TTC13	transcript10518.chr1.nic	protein_coding	230978560,230961209,230958224,230954333,230943240	230978916,230961303,230958299,230954403,230945454	Gene ID= ENSG00000143643.12 TPM= 2.9 Transcript Type= NA
chr1	230906243	230978859	230906243	230978859	-	ENST00000366662.8@TTC13	ENST00000366662.8	protein_coding	230978560,230961209,230958224,230954333,230940440,230939386,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243	230978859,230961303,230958299,230954403,230940556,230939496,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916299,230912758,230911549,230909020,230908791,230907019	Gene ID= ENSG00000143643.12 TPM= 7 Transcript Type= protein_coding
chr1	230906243	230978838	230906243	230978838	-	ENST00000366661.8@TTC13	ENST00000366661.8	protein_coding	230978560,230961209,230958224,230954333,230945389,230943806,230940440,230939386,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243	230978838,230961303,230958299,230954403,230945454,230943898,230940556,230939496,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916302,230912758,230911549,230909020,230908791,230907019	Gene ID= ENSG00000143643.12 TPM= 18.58 Transcript Type= protein_coding
chr1	230979049	231000595	230979049	231000595	+	ENST00000310256.6@ARV1	ENST00000310256.6	protein_coding	230979049,230988320,230990110,230995760,230997121,231000138	230979279,230988439,230990263,230995984,230997267,231000595	Gene ID= ENSG00000173409.13 TPM= 13.51 Transcript Type= protein_coding
chr1	230979082	231000595	230979082	231000595	+	transcript10517.chr1.nnic@ARV1	transcript10517.chr1.nnic	protein_coding	230979082,230988320,230995760,230997121,231000138	230979279,230988439,230995984,230997267,231000595	Gene ID= ENSG00000173409.13 TPM= 1.93 Transcript Type= NA
chr1	231018958	231040246	231018958	231040246	-	ENST00000366654.4@FAM89A	ENST00000366654.4	protein_coding	231039921,231018958	231040246,231020126	Gene ID= ENSG00000182118.7 TPM= 14.48 Transcript Type= protein_coding
chr1	231226767	231241189	231226767	231241189	-	transcript10552.chr1.nic@C1orf131	transcript10552.chr1.nic	protein_coding	231241024,231238857,231229150,231226973,231226767	231241189,231239188,231229209,231227068,231226825	Gene ID= ENSG00000143633.12 TPM= 2.9 Transcript Type= NA
chr1	231236696	231241187	231236696	231241187	-	ENST00000471936.1@C1orf131	ENST00000471936.1	protein_coding	231241024,231236696	231241187,231239188	Gene ID= ENSG00000143633.12 TPM= 1.93 Transcript Type= processed_transcript
chr1	231223763	231241178	231223763	231241178	-	ENST00000366651.7@C1orf131	ENST00000366651.7	protein_coding	231241024,231238857,231229150,231226973,231226739,231225471,231223763	231241178,231239188,231229206,231227068,231226825,231225523,231224414	Gene ID= ENSG00000143633.12 TPM= 5.79 Transcript Type= protein_coding
chr1	231241210	231277973	231241210	231277973	+	ENST00000366647.8@GNPAT	ENST00000366647.8	protein_coding	231241210,231250961,231260507,231262723,231265293,231265712,231266014,231266277,231267680,231270758,231272312,231273922,231275221,231275405,231276135,231277499	231241456,231251143,231260683,231262852,231265420,231265787,231266165,231266407,231267903,231271000,231272391,231274062,231275320,231275498,231276196,231277973	Gene ID= ENSG00000116906.11 TPM= 18.34 Transcript Type= protein_coding
chr1	231329700	231332402	231329700	231332402	+	transcript10555.chr1.nnic@NA	transcript10555.chr1.nnic	NA	231329700	231332402	Gene ID= novel_gene_chr1_10556 TPM= 16.41 Transcript Type= NA
chr1	231332753	231337852	231332753	231337852	-	ENST00000366645.1@EXOC8	ENST00000366645.1	protein_coding	231332753	231337852	Gene ID= ENSG00000116903.7 TPM= 39.58 Transcript Type= protein_coding
chr1	231337104	231353132	231337104	231353132	+	ENST00000391858.8@SPRTN	ENST00000391858.8	protein_coding	231337104,231339769,231347797,231351304	231338604,231339868,231347925,231353132	Gene ID= ENSG00000010072.15 TPM= 1.93 Transcript Type= protein_coding
chr1	231357116	231358508	231357116	231358508	+	transcript10573.chr1.nnic@NA	transcript10573.chr1.nnic	NA	231357116	231358508	Gene ID= novel_gene_chr1_10574 TPM= 1.93 Transcript Type= NA
chr1	231363751	231422800	231363751	231422800	-	transcript10582.chr1.nnic@EGLN1	transcript10582.chr1.nnic	protein_coding	231422516,231420998,231373980,231370562,231367569,231363751	231422800,231421963,231374099,231370698,231367636,231366475	Gene ID= ENSG00000135766.8 TPM= 137.87 Transcript Type= NA
chr1	231363751	231425044	231363751	231425044	-	ENST00000366641.3@EGLN1	ENST00000366641.3	protein_coding	231420998,231373980,231370562,231367569,231363751	231425044,231374099,231370698,231367636,231366475	Gene ID= ENSG00000135766.8 TPM= 484.44 Transcript Type= protein_coding
chr1	231363751	231422318	231363751	231422318	-	transcript10601.chr1.nnic@EGLN1	transcript10601.chr1.nnic	protein_coding	231420998,231373980,231367569,231363751	231422318,231374099,231367636,231366475	Gene ID= ENSG00000135766.8 TPM= 32.27 Transcript Type= NA
chr1	231363756	231422344	231363756	231422344	-	transcript10602.chr1.nnic@EGLN1	transcript10602.chr1.nnic	protein_coding	231420998,231373980,231370562,231363756	231422344,231374099,231370698,231366475	Gene ID= ENSG00000135766.8 TPM= 38.41 Transcript Type= NA
chr1	231528588	231568453	231528588	231568453	+	transcript10619.chr1.nnic@TSNAX	transcript10619.chr1.nnic	protein_coding	231528588,231529255,231537213,231542481,231561128,231564528,231568440	231528826,231529359,231537327,231542611,231561255,231565713,231568453	Gene ID= ENSG00000116918.13 TPM= 4.83 Transcript Type= NA
chr1	231535012	231566524	231535012	231566524	+	transcript10633.chr1.nnic@TSNAX	transcript10633.chr1.nnic	protein_coding	231535012,231537213,231542481,231561128,231564528	231535198,231537327,231542611,231561255,231566524	Gene ID= ENSG00000116918.13 TPM= 14.48 Transcript Type= NA
chr1	231528653	231566524	231528653	231566524	+	ENST00000366639.8@TSNAX	ENST00000366639.8	protein_coding	231528653,231529255,231537213,231542481,231561128,231564528	231528826,231529359,231537327,231542611,231561255,231566524	Gene ID= ENSG00000116918.13 TPM= 89.77 Transcript Type= protein_coding
chr1	232804892	232808407	232804892	232808407	+	ENST00000418460.2@MAP10	ENST00000418460.2	protein_coding	232804892	232808407	Gene ID= ENSG00000212916.4 TPM= 3.86 Transcript Type= protein_coding
chr1	232950614	232978751	232950614	232978751	+	ENST00000490807.5@NTPCR	ENST00000490807.5	protein_coding	232950614,232955557,232956347,232978163	232950744,232955719,232956443,232978751	Gene ID= ENSG00000135778.11 TPM= 2.9 Transcript Type= processed_transcript
chr1	232950640	232977528	232950640	232977528	+	ENST00000366627.4@NTPCR	ENST00000366627.4	protein_coding	232950640,232955557,232956347,232969909,232976342	232950744,232955719,232956443,232970118,232977528	Gene ID= ENSG00000135778.11 TPM= 1.93 Transcript Type= protein_coding
chr1	232979756	232982244	232979756	232982244	+	transcript10657.chr1.nnic@NA	transcript10657.chr1.nnic	NA	232979756	232982244	Gene ID= novel_gene_chr1_10658 TPM= 2.9 Transcript Type= NA
chr1	234373456	234384049	234373456	234384049	+	ENST00000366615.8@COA6	ENST00000366615.8	protein_coding	234373456,234374230,234383723	234373678,234374389,234384049	Gene ID= ENSG00000168275.14 TPM= 39.26 Transcript Type= protein_coding
chr1	234373468	234384048	234373468	234384048	+	ENST00000619305.1@COA6	ENST00000619305.1	protein_coding	234373468,234374230,234383723	234373678,234374389,234384048	Gene ID= ENSG00000168275.14 TPM= 22.85 Transcript Type= protein_coding
chr1	234373683	234384045	234373683	234384045	+	ENST00000366613.1@COA6	ENST00000366613.1	protein_coding	234373683,234374230,234383723	234373840,234374389,234384045	Gene ID= ENSG00000168275.14 TPM= 20.92 Transcript Type= protein_coding
chr1	234373701	234384046	234373701	234384046	+	ENST00000366612.1@COA6	ENST00000366612.1	protein_coding	234373701,234383723	234374389,234384046	Gene ID= ENSG00000168275.14 TPM= 1.93 Transcript Type= protein_coding
chr1	234391339	234479180	234391339	234479180	-	transcript10665.chr1.nnic@TARBP1	transcript10665.chr1.nnic	protein_coding	234478173,234472714,234471188,234467502,234465656,234463837,234460261,234459230,234457667,234450428,234437275,234433410,234430087,234429416,234429136,234427576,234427317,234425673,234420702,234418084,234410445,234405903,234401181,234398382,234393646,234393362,234392416,234391339	234479180,234472811,234471257,234467650,234465708,234463934,234460396,234459326,234457756,234450566,234437372,234433571,234430301,234429677,234429324,234427766,234427388,234425793,234420812,234418233,234410531,234406099,234401262,234398553,234393837,234393486,234392552,234391745	Gene ID= ENSG00000059588.9 TPM= 1.93 Transcript Type= NA
chr1	234391313	234479103	234391313	234479103	-	ENST00000040877.1@TARBP1	ENST00000040877.1	protein_coding	234478173,234472714,234471188,234467502,234465656,234463837,234460261,234459230,234457667,234450428,234448480,234446803,234437275,234433410,234430087,234429416,234429136,234427576,234427317,234425673,234420702,234418084,234410445,234405903,234401181,234398382,234393646,234393362,234392416,234391313	234479103,234472811,234471257,234467650,234465708,234463934,234460396,234459326,234457756,234450566,234448579,234446975,234437372,234433571,234430301,234429677,234429324,234427766,234427388,234425793,234420812,234418233,234410531,234406099,234401262,234398553,234393837,234393486,234392552,234391745	Gene ID= ENSG00000059588.9 TPM= 5.79 Transcript Type= protein_coding
chr1	234604269	234609525	234604269	234609525	-	ENST00000366609.3@IRF2BP2	ENST00000366609.3	protein_coding	234608447,234604269	234609525,234607852	Gene ID= ENSG00000168264.10 TPM= 26.06 Transcript Type= protein_coding
chr1	235109336	235128936	235109336	235128936	-	ENST00000366607.4@TOMM20	ENST00000366607.4	protein_coding	235128595,235122326,235119818,235113768,235109336	235128936,235122372,235119899,235113910,235112108	Gene ID= ENSG00000173726.10 TPM= 98.94 Transcript Type= protein_coding
chr1	235131183	235161457	235131183	235161457	-	ENST00000408888.7@RBM34	ENST00000408888.7	protein_coding	235161174,235160893,235160511,235154881,235152706,235148404,235138091,235137877,235136034,235135652,235131183	235161457,235161067,235160647,235155112,235152765,235148447,235138174,235137940,235136073,235135770,235131997	Gene ID= ENSG00000188739.14 TPM= 10.62 Transcript Type= protein_coding
chr1	235131183	235161282	235131183	235161282	-	transcript10692.chr1.nic@RBM34	transcript10692.chr1.nic	protein_coding	235161174,235160893,235154881,235152706,235148404,235138091,235137877,235136034,235135652,235131183	235161282,235161067,235155112,235152765,235148447,235138174,235137940,235136073,235135770,235131997	Gene ID= ENSG00000188739.14 TPM= 3.86 Transcript Type= NA
chr1	235196044	235328220	235196044	235328220	-	transcript10701.chr1.nic@ARID4B	transcript10701.chr1.nic	protein_coding	235327769,235326914,235260642,235257160,235255660,235252730,235246420,235240313,235234413,235231113,235229231,235224703,235223166,235221565,235220302,235219793,235213769,235196044	235328220,235326968,235260752,235257225,235255750,235252809,235246511,235240451,235234492,235231189,235229385,235224775,235223260,235221662,235220545,235219968,235214026,235196115	Gene ID= ENSG00000054267.21 TPM= 3.86 Transcript Type= NA
chr1	235328571	235343138	235328571	235343138	+	ENST00000391855.2@GGPS1	ENST00000391855.2	protein_coding	235328571,235341708,235342011	235328778,235341778,235343138	Gene ID= ENSG00000152904.11 TPM= 7.72 Transcript Type= protein_coding
chr1	235328570	235344532	235328570	235344532	+	ENST00000282841.9@GGPS1	ENST00000282841.9	protein_coding	235328570,235335242,235341708,235342011	235328778,235335334,235341778,235344532	Gene ID= ENSG00000152904.11 TPM= 1.93 Transcript Type= protein_coding
chr1	235367360	235448968	235367360	235448968	+	ENST00000366601.7@TBCE	ENST00000366601.7	protein_coding	235367360,235380019,235401503,235414433,235419473,235427140,235430705,235434204,235435745,235436386,235436544,235437322,235438769,235441814,235442852,235448349,235448670	235367504,235380149,235401587,235414618,235419561,235427239,235430804,235434280,235435840,235436450,235436608,235437474,235438922,235441882,235442911,235448440,235448968	Gene ID= ENSG00000116957.12 TPM= 22.2 Transcript Type= protein_coding
chr1	235447213	235504481	235447213	235504481	-	transcript10735.chr1.nnic@B3GALNT2	transcript10735.chr1.nnic	protein_coding	235504141,235494681,235489168,235484322,235480054,235470850,235458603,235455559,235454156,235453090,235447213	235504481,235494828,235489268,235484515,235480149,235470960,235458786,235455684,235454315,235453146,235450340	Gene ID= ENSG00000162885.12 TPM= 6.76 Transcript Type= NA
chr1	235975830	236065162	235975830	236065162	-	ENST00000264187.6@NID1	ENST00000264187.6	protein_coding	236064855,236048690,236045457,236041910,236038104,236032401,236029550,236025896,236024070,236017148,236013411,236011921,235993645,235990886,235985379,235981611,235980496,235979822,235978995,235975830	236065162,236048989,236045683,236042292,236038253,236032652,236029750,236026141,236024213,236017273,236013560,236012043,235993872,235991058,235985505,235981782,235980653,235979945,235979107,235977988	Gene ID= ENSG00000116962.14 TPM= 18.34 Transcript Type= protein_coding
chr1	236142532	236208909	236142532	236208909	+	ENST00000366592.7@GPR137B	ENST00000366592.7	protein_coding	236142532,236168706,236178414,236179879,236183778,236205126,236208050	236143036,236168755,236178636,236180028,236183906,236205250,236208909	Gene ID= ENSG00000077585.13 TPM= 3.86 Transcript Type= protein_coding
chr1	236215555	236281985	236215555	236281985	-	ENST00000354619.9@ERO1B	ENST00000354619.9	protein_coding	236281682,236269875,236253422,236252050,236249885,236243422,236236278,236235789,236232828,236230224,236226647,236226269,236225070,236221924,236220832,236215555	236281985,236269994,236253505,236252091,236249967,236243495,236236398,236235835,236232839,236230250,236226739,236226515,236225139,236222010,236220965,236218576	Gene ID= ENSG00000086619.13 TPM= 1.93 Transcript Type= protein_coding
chr1	236523975	236549263	236523975	236549263	+	transcript10760.chr1.nic@LGALS8	transcript10760.chr1.nic	protein_coding	236523975,236525968,236537497,236538879,236540564,236541654,236542761,236542915,236543560,236544750,236548012	236524061,236526115,236537585,236539089,236540683,236541710,236542787,236543040,236543648,236544915,236549263	Gene ID= ENSG00000116977.18 TPM= 1.93 Transcript Type= NA
chr1	236523599	236551010	236523599	236551010	+	ENST00000366584.8@LGALS8	ENST00000366584.8	protein_coding	236523599,236525968,236537497,236538879,236540564,236541654,236542761,236543560,236544750,236548012	236524061,236526115,236537585,236539089,236540683,236541710,236542787,236543648,236544915,236551010	Gene ID= ENSG00000116977.18 TPM= 2.9 Transcript Type= protein_coding
chr1	236549005	236604504	236549005	236604504	-	ENST00000366582.7@HEATR1	ENST00000366582.7	protein_coding	236604422,236603954,236603160,236599483,236597878,236596836,236595833,236595540,236594012,236592523,236591993,236590847,236587948,236587402,236586241,236585820,236585025,236583013,236582736,236581222,236576780,236576219,236574661,236574202,236572725,236572411,236571568,236571351,236568996,236566646,236565919,236564498,236561225,236559714,236558995,236558237,236557195,236556100,236555805,236555551,236555296,236554598,236553581,236551999,236549005	236604504,236604127,236603376,236599624,236597979,236596976,236596044,236595673,236594114,236592633,236592110,236590954,236588043,236587490,236586452,236585941,236585216,236583196,236582872,236581414,236576949,236576377,236574903,236574333,236572828,236572554,236571686,236571472,236569124,236566876,236566045,236564661,236561271,236559837,236559135,236558529,236557345,236556258,236555939,236555655,236555464,236554752,236553739,236552107,236550990	Gene ID= ENSG00000119285.10 TPM= 10.62 Transcript Type= protein_coding
chr1	236686508	236764631	236686508	236764631	+	ENST00000366578.5@ACTN2	ENST00000366578.5	protein_coding	236686508,236717858,236718894,236720105,236725933,236727678,236731233,236735635,236737122,236739302,236742896,236744626,236747667,236749124,236751470,236753947,236755019,236757486,236759724,236761015,236762461	236686799,236717972,236719013,236720191,236726020,236727756,236731314,236735720,236737214,236739532,236743043,236744776,236747775,236749264,236751652,236754081,236755198,236757632,236759789,236761173,236764631	Gene ID= ENSG00000077522.12 TPM= 309.08 Transcript Type= protein_coding
chr1	236795286	236862298	236795286	236862298	+	transcript10922.chr1.nic@MTR	transcript10922.chr1.nic	protein_coding	236795286,236803428,236806144,236808704,236810503,236812738,236815604,236816449,236824119,236825338,236826829,236829189,236831966,236835547,236838414,236850344,236852521,236852948,236859833,236861125,236862236	236795737,236803642,236806233,236808773,236810595,236812844,236815663,236816543,236824219,236825399,236826896,236829268,236832078,236835687,236838599,236850523,236852637,236853088,236859922,236861277,236862298	Gene ID= ENSG00000116984.12 TPM= 14.48 Transcript Type= NA
chr1	236902034	236902965	236902034	236902965	+	transcript10926.chr1.nnic@NA	transcript10926.chr1.nnic	NA	236902034	236902965	Gene ID= novel_gene_chr1_10927 TPM= 1.93 Transcript Type= NA
chr1	240339117	240475183	240339117	240475183	+	transcript10928.chr1.nnic@FMN2	transcript10928.chr1.nnic	protein_coding	240339117,240355816,240392511,240438061,240472372,240474128	240339249,240355908,240392562,240438210,240472453,240475183	Gene ID= ENSG00000155816.19 TPM= 2.9 Transcript Type= NA
chr1	240492013	240612128	240492013	240612128	-	transcript10929.chr1.nnic@GREM2	transcript10929.chr1.nnic	protein_coding	240611884,240531635,240492013	240612128,240531963,240493476	Gene ID= ENSG00000180875.4 TPM= 1.93 Transcript Type= NA
chr1	241497603	241519761	241497603	241519761	-	ENST00000366560.3@FH	ENST00000366560.3	protein_coding	241519591,241517182,241513603,241511967,241508603,241506003,241504042,241502443,241500437,241497603	241519761,241517316,241513713,241512143,241508785,241506168,241504245,241502570,241500590,241497970	Gene ID= ENSG00000091483.6 TPM= 39.58 Transcript Type= protein_coding
chr1	241593602	241640355	241593602	241640355	-	ENST00000490673.5@OPN3	ENST00000490673.5	protein_coding	241639882,241597746,241593602	241640355,241597997,241594691	Gene ID= ENSG00000054277.13 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr1	243165090	243255786	243165090	243255786	-	transcript10953.chr1.nic@CEP170	transcript10953.chr1.nic	protein_coding	243255040,243225176,243221724,243211886,243200777,243200518,243199060,243191018,243185779,243172697,243169628,243165090	243255786,243225321,243221813,243211964,243200835,243200680,243199194,243191494,243186422,243172846,243169754,243166116	Gene ID= ENSG00000143702.15 TPM= 2.9 Transcript Type= NA
chr1	243255323	243500089	243255323	243500089	+	transcript10947.chr1.nic@SDCCAG8	transcript10947.chr1.nic	protein_coding	243255323,243270105,243270978,243274543,243286272,243304713,243307989,243316755,243330540,243341039,243344215,243378721,243415702,243417968,243426427,243489014,243499756	243256240,243270257,243271063,243274656,243286397,243304777,243308177,243316893,243330692,243341173,243344331,243378863,243415829,243418076,243426558,243489140,243500089	Gene ID= ENSG00000054282.15 TPM= 5.79 Transcript Type= NA
chr1	243256051	243306438	243256051	243306438	+	transcript10962.chr1.nic@SDCCAG8	transcript10962.chr1.nic	protein_coding	243256051,243270105,243270978,243274543,243286272,243293091,243304713,243305012	243256240,243270257,243271063,243274656,243286397,243293219,243304777,243306438	Gene ID= ENSG00000054282.15 TPM= 1.93 Transcript Type= NA
chr1	243256051	243306438	243256051	243306438	+	transcript10966.chr1.nic@SDCCAG8	transcript10966.chr1.nic	protein_coding	243256051,243270105,243270978,243274543,243286272,243304713,243305012	243256240,243270257,243271063,243274656,243286397,243304777,243306438	Gene ID= ENSG00000054282.15 TPM= 1.93 Transcript Type= NA
chr1	243256056	243500092	243256056	243500092	+	ENST00000366541.7@SDCCAG8	ENST00000366541.7	protein_coding	243256056,243270105,243270978,243274543,243286272,243293091,243304713,243307989,243316755,243330540,243341039,243344215,243378721,243415702,243417968,243426427,243489014,243499756	243256240,243270257,243271063,243274656,243286397,243293219,243304777,243308177,243316893,243330692,243341173,243344331,243378863,243415829,243418076,243426558,243489140,243500092	Gene ID= ENSG00000054282.15 TPM= 3.86 Transcript Type= protein_coding
chr1	244051283	244057476	244051283	244057476	+	ENST00000358704.4@ZBTB18	ENST00000358704.4	protein_coding	244051283,244053788	244051444,244057476	Gene ID= ENSG00000179456.10 TPM= 13.51 Transcript Type= protein_coding
chr1	244408494	244452134	244408494	244452134	-	ENST00000366535.3@ADSS	ENST00000366535.3	protein_coding	244451635,244437666,244436825,244432545,244424321,244423953,244422835,244420170,244418760,244417628,244415981,244411287,244408494	244452134,244437768,244436893,244432595,244424387,244424060,244422916,244420296,244418914,244417752,244416078,244411436,244409638	Gene ID= ENSG00000035687.9 TPM= 18.34 Transcript Type= protein_coding
chr1	244652935	244709033	244652935	244709033	+	ENST00000302550.15@DESI2	ENST00000302550.15	protein_coding	244652935,244686597,244689249,244691879,244705556	244653355,244686669,244689342,244692020,244709033	Gene ID= ENSG00000121644.18 TPM= 34.27 Transcript Type= protein_coding
chr1	244653048	244709033	244653048	244709033	+	transcript10979.chr1.nnic@DESI2	transcript10979.chr1.nnic	protein_coding	244653048,244686597,244691879,244705556	244653355,244686669,244692020,244709033	Gene ID= ENSG00000121644.18 TPM= 12.07 Transcript Type= NA
chr1	244653113	244656521	244653113	244656521	+	transcript10980.chr1.nnic@DESI2	transcript10980.chr1.nnic	protein_coding	244653113,244653913,244656296	244653355,244654025,244656521	Gene ID= ENSG00000121644.18 TPM= 1.93 Transcript Type= NA
chr1	244653103	244705951	244653103	244705951	+	ENST00000263831.11@DESI2	ENST00000263831.11	protein_coding	244653103,244686597,244691884,244705556	244653355,244686669,244692020,244705951	Gene ID= ENSG00000121644.18 TPM= 7.72 Transcript Type= protein_coding
chr1	244835187	244843280	244835187	244843280	+	transcript11012.chr1.nnic@COX20	transcript11012.chr1.nnic	protein_coding	244835187,244835476,244841944,244842195,244843041	244835333,244835756,244842058,244842258,244843280	Gene ID= ENSG00000203667.9 TPM= 16.41 Transcript Type= NA
chr1	244835322	244845057	244835322	244845057	+	ENST00000411948.6@COX20	ENST00000411948.6	protein_coding	244835322,244841944,244842195,244843041	244835756,244842058,244842258,244845057	Gene ID= ENSG00000203667.9 TPM= 41.03 Transcript Type= protein_coding
chr1	244835656	244843880	244835656	244843880	+	ENST00000391839.6@COX20	ENST00000391839.6	protein_coding	244835656,244842195,244843041	244835756,244842258,244843880	Gene ID= ENSG00000203667.9 TPM= 2.9 Transcript Type= processed_transcript
chr1	244835659	244845057	244835659	244845057	+	ENST00000498262.1@COX20	ENST00000498262.1	protein_coding	244835659,244841944,244842199,244843041	244835756,244842058,244842258,244845057	Gene ID= ENSG00000203667.9 TPM= 2.41 Transcript Type= processed_transcript
chr1	244853406	244863106	244853406	244863106	-	ENST00000440865.2@HNRNPU	ENST00000440865.2	protein_coding	244862619,244862461,244860335,244859275,244858729,244858011,244857598,244856728,244856457,244855904,244855424,244854973,244853406	244863106,244862534,244860474,244859374,244858841,244858274,244857717,244856856,244856625,244856158,244855608,244855044,244854503	Gene ID= ENSG00000153187.18 TPM= 4.34 Transcript Type= protein_coding
chr1	244857440	244862414	244857440	244862414	-	transcript11027.chr1.nic@HNRNPU	transcript11027.chr1.nic	protein_coding	244858729,244858011,244857440	244862414,244858274,244857717	Gene ID= ENSG00000153187.18 TPM= 16.41 Transcript Type= NA
chr1	244969241	244970981	244969241	244970981	-	transcript11053.chr1.nnic@AL356512.1	transcript11053.chr1.nnic	antisense_RNA	244970812,244969241	244970981,244969979	Gene ID= ENSG00000272195.1 TPM= 1.93 Transcript Type= NA
chr1	244969348	244971006	244969348	244971006	-	transcript11054.chr1.nnic@AL356512.1	transcript11054.chr1.nnic	antisense_RNA	244970812,244969348	244971006,244969979	Gene ID= ENSG00000272195.1 TPM= 2.9 Transcript Type= NA
chr1	244969779	244971598	244969779	244971598	+	transcript11042.chr1.nnic@EFCAB2	transcript11042.chr1.nnic	protein_coding	244969779,244970329,244971051	244970043,244970443,244971598	Gene ID= ENSG00000203666.12 TPM= 1.93 Transcript Type= NA
chr1	244969846	244972964	244969846	244972964	+	transcript11043.chr1.nnic@EFCAB2	transcript11043.chr1.nnic	protein_coding	244969846,244970329,244972509	244970043,244970443,244972964	Gene ID= ENSG00000203666.12 TPM= 2.9 Transcript Type= NA
chr1	244970390	245122991	244970390	245122991	+	ENST00000487845.5@EFCAB2	ENST00000487845.5	protein_coding	244970390,245059386,245082083,245083442,245083622,245121920	244970443,245059458,245082162,245083484,245083688,245122991	Gene ID= ENSG00000203666.12 TPM= 2.9 Transcript Type= processed_transcript
chr1	246540560	246567001	246540560	246567001	-	transcript11087.chr1.nnic@TFB2M	transcript11087.chr1.nnic	protein_coding	246566815,246565826,246564346,246557381,246556573,246551213,246548545,246544521,246540560	246567001,246565988,246564434,246557534,246556721,246551302,246548607,246544681,246541202	Gene ID= ENSG00000162851.7 TPM= 2.9 Transcript Type= NA
chr1	246540560	246567001	246540560	246567001	-	transcript11088.chr1.nnic@TFB2M	transcript11088.chr1.nnic	protein_coding	246566815,246565826,246564346,246557381,246556573,246551213,246548545,246544521,246540560	246567001,246566059,246564434,246557534,246556721,246551302,246548607,246544681,246541202	Gene ID= ENSG00000162851.7 TPM= 7.72 Transcript Type= NA
chr1	246540560	246566248	246540560	246566248	-	transcript11093.chr1.nnic@TFB2M	transcript11093.chr1.nnic	protein_coding	246565826,246564346,246557381,246556573,246548545,246544521,246540560	246566248,246564434,246557534,246556721,246548607,246544681,246541202	Gene ID= ENSG00000162851.7 TPM= 4.83 Transcript Type= NA
chr1	246540560	246567002	246540560	246567002	-	transcript11096.chr1.nnic@TFB2M	transcript11096.chr1.nnic	protein_coding	246565826,246564346,246548545,246544521,246540560	246567002,246564434,246548607,246544681,246541202	Gene ID= ENSG00000162851.7 TPM= 1.93 Transcript Type= NA
chr1	246540560	246566324	246540560	246566324	-	ENST00000366514.4@TFB2M	ENST00000366514.4	protein_coding	246565826,246564346,246557381,246556573,246551213,246548545,246544521,246540560	246566324,246564434,246557534,246556721,246551302,246548607,246544681,246541202	Gene ID= ENSG00000162851.7 TPM= 39.58 Transcript Type= protein_coding
chr1	246566356	246568154	246566356	246568154	+	transcript11101.chr1.nnic@NA	transcript11101.chr1.nnic	NA	246566356	246568154	Gene ID= novel_gene_chr1_11102 TPM= 1.93 Transcript Type= NA
chr1	246566552	246668342	246566552	246668342	+	transcript11061.chr1.nnic@CNST	transcript11061.chr1.nnic	protein_coding	246566552,246591512,246618258,246621429,246631894,246633924,246634473,246641749,246641941,246647139,246660199,246665700	246566663,246591941,246618401,246621634,246631924,246634010,246634587,246641770,246642037,246648037,246660334,246668342	Gene ID= ENSG00000162852.13 TPM= 3.86 Transcript Type= NA
chr1	246566456	246648235	246566456	246648235	+	transcript11085.chr1.nic@CNST	transcript11085.chr1.nic	protein_coding	246566456,246591512,246621429,246631894,246633924,246634473,246641749,246641941,246647139	246566663,246591941,246621634,246631924,246634010,246634587,246641770,246642037,246648235	Gene ID= ENSG00000162852.13 TPM= 2.9 Transcript Type= NA
chr1	246566446	246668584	246566446	246668584	+	ENST00000366513.8@CNST	ENST00000366513.8	protein_coding	246566446,246591512,246621429,246631894,246633924,246634473,246641749,246641941,246647139,246660199,246665700	246566663,246591941,246621634,246631924,246634010,246634587,246641770,246642037,246648037,246660334,246668584	Gene ID= ENSG00000162852.13 TPM= 13.51 Transcript Type= protein_coding
chr1	246724047	246768137	246724047	246768137	+	ENST00000366510.3@SCCPDH	ENST00000366510.3	protein_coding	246724047,246726892,246735975,246740172,246744076,246758226,246759034,246759957,246760171,246764246,246766058,246767195	246724612,246727004,246736055,246740301,246744125,246758356,246759151,246760076,246760227,246764357,246766139,246768137	Gene ID= ENSG00000143653.9 TPM= 3.86 Transcript Type= protein_coding
chr1	247099962	247104368	247099962	247104368	-	ENST00000448299.6@ZNF669	ENST00000448299.6	protein_coding	247104197,247101987,247101731,247099962	247104368,247102113,247101791,247101319	Gene ID= ENSG00000188295.14 TPM= 1.93 Transcript Type= protein_coding
chr1	247110160	247112417	247110160	247112417	-	ENST00000623686.1@C1orf229	ENST00000623686.1	lincRNA	247110160	247112417	Gene ID= ENSG00000221953.5 TPM= 5.79 Transcript Type= lincRNA
chr1	247155901	247172016	247155901	247172016	-	ENST00000340684.10@ZNF124	ENST00000340684.10	protein_coding	247171848,247159687,247159006,247155901	247172016,247159813,247159066,247157217	Gene ID= ENSG00000196418.12 TPM= 3.86 Transcript Type= protein_coding
chr1	247187816	247189792	247187816	247189792	+	transcript11122.chr1.nnic@NA	transcript11122.chr1.nnic	NA	247187816	247189792	Gene ID= novel_gene_chr1_11123 TPM= 8.69 Transcript Type= NA
chr1	247307086	247331853	247307086	247331853	-	transcript11129.chr1.nnic@ZNF496	transcript11129.chr1.nnic	protein_coding	247331790,247331432,247329966,247329189,247328683,247323154,247310324,247309699,247308475,247307086	247331853,247331647,247330081,247329615,247328866,247323230,247310456,247309806,247308588,247308027	Gene ID= ENSG00000162714.12 TPM= 2.9 Transcript Type= NA
chr1	247331255	247334576	247331255	247334576	+	transcript11133.chr1.nnic@NA	transcript11133.chr1.nnic	NA	247331255	247334576	Gene ID= novel_gene_chr1_11134 TPM= 22.2 Transcript Type= NA
chr1	248810451	248826633	248810451	248826633	-	ENST00000366472.5@SH3BP5L	ENST00000366472.5	protein_coding	248825835,248824753,248816822,248816534,248814449,248812989,248810451	248826633,248825366,248816884,248816662,248814610,248813162,248812370	Gene ID= ENSG00000175137.10 TPM= 9.17 Transcript Type= protein_coding
chr1	248816030	248825899	248816030	248825899	-	transcript11138.chr1.nic@SH3BP5L	transcript11138.chr1.nic	protein_coding	248825835,248824753,248816822,248816030	248825899,248825366,248816884,248816662	Gene ID= ENSG00000175137.10 TPM= 2.41 Transcript Type= NA
chr1	248838367	248846341	248838367	248846341	+	transcript11149.chr1.nnic@ZNF672	transcript11149.chr1.nnic	protein_coding	248838367,248844483,248845566,248846191	248838551,248844636,248845662,248846341	Gene ID= ENSG00000171161.12 TPM= 2.9 Transcript Type= NA
chr1	248838280	248849517	248838280	248849517	+	ENST00000306562.7@ZNF672	ENST00000306562.7	protein_coding	248838280,248844483,248845566,248847052	248838551,248844636,248845662,248849517	Gene ID= ENSG00000171161.12 TPM= 92.67 Transcript Type= protein_coding
chr1	248850008	248859117	248850008	248859117	-	transcript11139.chr1.nic@ZNF692	transcript11139.chr1.nic	protein_coding	248858918,248858131,248857828,248857234,248856514,248856288,248855725,248855558,248855380,248853937,248850682,248850008	248859117,248858321,248857859,248857436,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 4.83 Transcript Type= NA
chr1	248850008	248859117	248850008	248859117	-	transcript11147.chr1.nic@ZNF692	transcript11147.chr1.nic	protein_coding	248858918,248857234,248856514,248856288,248855558,248855380,248853937,248850682,248850008	248859117,248858321,248856562,248856422,248855946,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 3.86 Transcript Type= NA
chr1	248872554	248873791	248872554	248873791	-	transcript11154.chr1.nnic@NA	transcript11154.chr1.nnic	NA	248872554	248873791	Gene ID= novel_gene_chr1_11155 TPM= 3.86 Transcript Type= NA
chr1	248906196	248919946	248906196	248919946	+	ENST00000355360.8@PGBD2	ENST00000355360.8	protein_coding	248906196,248913816,248917279	248906342,248913879,248919946	Gene ID= ENSG00000185220.11 TPM= 2.9 Transcript Type= protein_coding
chr2	218153	264824	218153	264824	-	transcript2.chr2.nic@SH3YL1	transcript2.chr2.nic	protein_coding	264782,253005,249731,247538,234160,233101,231023,229966,218153	264824,253115,249844,247602,234272,233229,231191,230044,219001	Gene ID= ENSG00000035115.21 TPM= 3.86 Transcript Type= NA
chr2	264945	278283	264945	278283	+	transcript8.chr2.nnic@ACP1	transcript8.chr2.nnic	protein_coding	264945,270287,271866,272037,275140,276980,277227	265007,270496,271939,272150,275201,277085,278283	Gene ID= ENSG00000143727.15 TPM= 4.1 Transcript Type= NA
chr2	264872	278283	264872	278283	+	ENST00000272065.9@ACP1	ENST00000272065.9	protein_coding	264872,271866,272037,275140,276980,277227	265007,271939,272150,275201,277085,278283	Gene ID= ENSG00000143727.15 TPM= 76.5 Transcript Type= protein_coding
chr2	264869	278283	264869	278283	+	ENST00000272067.10@ACP1	ENST00000272067.10	protein_coding	264869,271866,272192,275140,276980,277227	265007,271939,272305,275201,277085,278283	Gene ID= ENSG00000143727.15 TPM= 15.2 Transcript Type= protein_coding
chr2	669211	677400	669211	677400	-	transcript26.chr2.nic@TMEM18	transcript26.chr2.nic	protein_coding	677289,675510,672808,669757,669211	677400,676238,672862,669850,669675	Gene ID= ENSG00000151353.14 TPM= 2.9 Transcript Type= NA
chr2	1824459	1834138	1824459	1834138	+	transcript30.chr2.nnic@AC093390.1	transcript30.chr2.nnic	antisense_RNA	1824459,1828925,1833811	1824970,1829112,1834138	Gene ID= ENSG00000232057.1 TPM= 1.93 Transcript Type= NA
chr2	3188925	3377882	3188925	3377882	-	ENST00000382125.8@EIPR1	ENST00000382125.8	protein_coding	3377648,3354550,3338017,3257299,3214149,3196881,3193999,3192414,3188925	3377882,3354633,3338149,3257455,3214248,3197017,3194166,3192581,3189508	Gene ID= ENSG00000032389.12 TPM= 30.24 Transcript Type= protein_coding
chr2	3188925	3377853	3188925	3377853	-	transcript35.chr2.nic@EIPR1	transcript35.chr2.nic	protein_coding	3377648,3354550,3338017,3214149,3196881,3193999,3192414,3188925	3377853,3354633,3338149,3214248,3197017,3194166,3192581,3189508	Gene ID= ENSG00000032389.12 TPM= 3.21 Transcript Type= NA
chr2	3188925	3377830	3188925	3377830	-	ENST00000398659.8@EIPR1	ENST00000398659.8	protein_coding	3377648,3354550,3338017,3274339,3257299,3214149,3196881,3193999,3192414,3188925	3377830,3354633,3338149,3274419,3257455,3214248,3197017,3194166,3192581,3189508	Gene ID= ENSG00000032389.12 TPM= 4.18 Transcript Type= protein_coding
chr2	3379700	3479565	3379700	3479565	+	transcript38.chr2.nnic@TRAPPC12	transcript38.chr2.nnic	protein_coding	3379700,3380819,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219	3379876,3381082,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479565	Gene ID= ENSG00000171853.15 TPM= 8.04 Transcript Type= NA
chr2	3379675	3479567	3379675	3479567	+	ENST00000382110.6@TRAPPC12	ENST00000382110.6	protein_coding	3379675,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219	3379839,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479567	Gene ID= ENSG00000171853.15 TPM= 13.83 Transcript Type= protein_coding
chr2	3379686	3479566	3379686	3479566	+	ENST00000324266.9@TRAPPC12	ENST00000324266.9	protein_coding	3379686,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219	3379876,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479566	Gene ID= ENSG00000171853.15 TPM= 23 Transcript Type= protein_coding
chr2	3379683	3479565	3379683	3479565	+	transcript44.chr2.nic@TRAPPC12	transcript44.chr2.nic	protein_coding	3379683,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3477695,3478846	3379876,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3477795,3479565	Gene ID= ENSG00000171853.15 TPM= 4.34 Transcript Type= NA
chr2	3481833	3485088	3481833	3485088	+	transcript47.chr2.nnic@NA	transcript47.chr2.nnic	NA	3481833	3485088	Gene ID= novel_gene_chr2_48 TPM= 1.93 Transcript Type= NA
chr2	3497361	3519736	3497361	3519736	-	ENST00000327435.10@ADI1	ENST00000327435.10	protein_coding	3519368,3513857,3500814,3497361	3519736,3513976,3500993,3499082	Gene ID= ENSG00000182551.13 TPM= 46.33 Transcript Type= protein_coding
chr2	3541429	3545018	3541429	3545018	-	transcript63.chr2.nnic@NA	transcript63.chr2.nnic	NA	3541429	3545018	Gene ID= novel_gene_chr2_64 TPM= 13.51 Transcript Type= NA
chr2	3545115	3558616	3545115	3558616	-	ENST00000315212.3@RNASEH1	ENST00000315212.3	protein_coding	3558133,3556789,3552144,3550373,3549058,3548640,3547931,3545115	3558616,3556904,3552308,3550472,3549112,3548724,3548055,3545871	Gene ID= ENSG00000171865.9 TPM= 83.02 Transcript Type= protein_coding
chr2	3558469	3561689	3558469	3561689	+	transcript67.chr2.nnic@RNASEH1-AS1	transcript67.chr2.nnic	antisense_RNA	3558469,3558625,3559448,3561317	3558521,3558998,3559729,3561689	Gene ID= ENSG00000234171.2 TPM= 2.9 Transcript Type= NA
chr2	3558492	3561745	3558492	3561745	+	ENST00000438436.2@RNASEH1-AS1	ENST00000438436.2	antisense_RNA	3558492,3559448,3561317	3558998,3559729,3561745	Gene ID= ENSG00000234171.2 TPM= 2.41 Transcript Type= antisense_RNA
chr2	3558578	3561731	3558578	3561731	+	ENST00000426725.1@RNASEH1-AS1	ENST00000426725.1	antisense_RNA	3558578,3561317	3558998,3561731	Gene ID= ENSG00000234171.2 TPM= 2.41 Transcript Type= antisense_RNA
chr2	3575205	3580919	3575205	3580919	+	ENST00000304921.9@RPS7	ENST00000304921.9	protein_coding	3575205,3575592,3575817,3576487,3577710,3580110,3580805	3575350,3575684,3575888,3576630,3577774,3580260,3580919	Gene ID= ENSG00000171863.12 TPM= 226.85 Transcript Type= protein_coding
chr2	3575325	3580919	3575325	3580919	+	ENST00000403564.5@RPS7	ENST00000403564.5	protein_coding	3575325,3575592,3575817,3576487,3577710,3580110,3580805	3575448,3575684,3575888,3576630,3577774,3580260,3580919	Gene ID= ENSG00000171863.12 TPM= 10.62 Transcript Type= protein_coding
chr2	3575358	3580901	3575358	3580901	+	ENST00000406376.1@RPS7	ENST00000406376.1	protein_coding	3575358,3575601,3575817,3576487,3577710,3580110,3580805	3575448,3575684,3575888,3576630,3577774,3580260,3580901	Gene ID= ENSG00000171863.12 TPM= 1.93 Transcript Type= protein_coding
chr2	6848316	6865696	6848316	6865696	-	ENST00000256722.9@CMPK2	ENST00000256722.9	protein_coding	6865022,6863464,6861184,6851450,6848316	6865696,6863578,6861385,6851683,6849973	Gene ID= ENSG00000134326.11 TPM= 6.76 Transcript Type= protein_coding
chr2	6877665	6898239	6877665	6898239	+	ENST00000382040.3@RSAD2	ENST00000382040.3	protein_coding	6877665,6883371,6886935,6890176,6893671,6895778	6878146,6883532,6887164,6890325,6893703,6898239	Gene ID= ENSG00000134321.11 TPM= 5.79 Transcript Type= protein_coding
chr2	6917392	7044182	6917392	7044182	+	ENST00000320892.10@RNF144A	ENST00000320892.10	protein_coding	6917392,6940948,6996916,7014454,7014712,7020473,7024369,7030126,7039629	6917622,6941147,6997061,7014558,7014772,7020680,7024516,7030215,7044182	Gene ID= ENSG00000151692.14 TPM= 6.76 Transcript Type= protein_coding
chr2	6917421	6998141	6917421	6998141	+	transcript78.chr2.nic@RNF144A	transcript78.chr2.nic	protein_coding	6917421,6940948,6996916	6917622,6941147,6998141	Gene ID= ENSG00000151692.14 TPM= 1.93 Transcript Type= NA
chr2	8728857	8837625	8728857	8837625	-	ENST00000256707.7@KIDINS220	ENST00000256707.7	protein_coding	8837480,8826986,8818695,8817618,8813237,8812395,8806271,8802930,8800400,8798202,8796771,8793810,8791060,8789880,8788647,8786206,8785741,8779674,8778896,8778639,8776748,8770670,8751466,8750112,8747887,8747145,8736868,8734655,8733444,8728857	8837625,8827129,8818793,8817716,8813335,8812493,8806369,8803127,8800498,8798300,8796869,8793987,8791224,8790059,8788812,8786357,8786030,8779814,8779139,8778727,8776892,8770832,8751644,8750335,8748000,8747201,8736999,8734753,8733680,8731982	Gene ID= ENSG00000134313.15 TPM= 15.44 Transcript Type= protein_coding
chr2	9405684	9423253	9405684	9423253	-	transcript105.chr2.nnic@ITGB1BP1	transcript105.chr2.nnic	protein_coding	9422479,9418626,9414178,9412269,9408113,9407449,9406009,9405684	9423253,9418732,9414256,9412405,9408205,9407598,9406905,9405909	Gene ID= ENSG00000119185.12 TPM= 2.9 Transcript Type= NA
chr2	9405684	9423198	9405684	9423198	-	transcript116.chr2.nnic@ITGB1BP1	transcript116.chr2.nnic	protein_coding	9422479,9418626,9414178,9412269,9408113,9406009,9405684	9423198,9418732,9414256,9412405,9408205,9407598,9405909	Gene ID= ENSG00000119185.12 TPM= 1.93 Transcript Type= NA
chr2	9406660	9423204	9406660	9423204	-	transcript120.chr2.nic@ITGB1BP1	transcript120.chr2.nic	protein_coding	9422966,9418626,9414178,9412269,9408113,9407449,9406660	9423204,9418732,9414256,9412405,9408205,9407598,9406905	Gene ID= ENSG00000119185.12 TPM= 4.34 Transcript Type= NA
chr2	9423568	9473101	9423568	9473101	+	ENST00000238112.7@CPSF3	ENST00000238112.7	protein_coding	9423568,9428765,9429923,9430752,9432511,9433871,9436211,9440491,9441818,9443515,9448198,9452913,9455659,9456933,9459531,9467707,9471343,9472916	9423823,9428828,9430020,9430880,9432688,9433960,9436361,9440666,9441976,9443661,9448350,9453021,9455757,9457027,9459618,9467776,9471439,9473101	Gene ID= ENSG00000119203.13 TPM= 64.68 Transcript Type= protein_coding
chr2	9474537	9489742	9474537	9489742	+	ENST00000470914.5@IAH1	ENST00000470914.5	protein_coding	9474537,9478222,9481286,9484432,9488147	9474647,9478370,9481447,9484550,9489742	Gene ID= ENSG00000134330.18 TPM= 5.79 Transcript Type= protein_coding
chr2	9489260	9555851	9489260	9555851	-	transcript98.chr2.nnic@ADAM17	transcript98.chr2.nnic	protein_coding	9555509,9527786,9526111,9523249,9521203,9518103,9517901,9509979,9505166,9502173,9497114,9494637,9493747,9492898,9491101,9489260	9555851,9527954,9526244,9523338,9521316,9518247,9517989,9510131,9505365,9502276,9497248,9494767,9493825,9492986,9491151,9490518	Gene ID= ENSG00000151694.12 TPM= 1.93 Transcript Type= NA
chr2	9488486	9555788	9488486	9555788	-	ENST00000310823.7@ADAM17	ENST00000310823.7	protein_coding	9555509,9543153,9536698,9535834,9527786,9526111,9523249,9521203,9518103,9517901,9509979,9505166,9502173,9497114,9494637,9493747,9492898,9491101,9488486	9555788,9543285,9536828,9535922,9527954,9526244,9523338,9521316,9518247,9517989,9510131,9505365,9502276,9497248,9494767,9493825,9492986,9491151,9490518	Gene ID= ENSG00000151694.12 TPM= 1.93 Transcript Type= protein_coding
chr2	9583972	9631014	9583972	9631014	-	ENST00000238081.7@YWHAQ	ENST00000238081.7	protein_coding	9630941,9630159,9591392,9588165,9587414,9583972	9631014,9630534,9591515,9588328,9587509,9585345	Gene ID= ENSG00000134308.13 TPM= 69.02 Transcript Type= protein_coding
chr2	9583972	9630616	9583972	9630616	-	ENST00000381844.8@YWHAQ	ENST00000381844.8	protein_coding	9630159,9591392,9588165,9587414,9583972	9630616,9591515,9588328,9587509,9585345	Gene ID= ENSG00000134308.13 TPM= 14.96 Transcript Type= protein_coding
chr2	10039092	10040663	10039092	10040663	-	ENST00000567540.1@AC104794.2	ENST00000567540.1	lincRNA	10039092	10040663	Gene ID= ENSG00000260077.1 TPM= 2.9 Transcript Type= lincRNA
chr2	10043555	10054836	10043555	10054836	+	ENST00000305883.5@KLF11	ENST00000305883.5	protein_coding	10043555,10046150,10047650,10052227	10043758,10046419,10048595,10054836	Gene ID= ENSG00000172059.10 TPM= 40.54 Transcript Type= protein_coding
chr2	10302908	10427609	10302908	10427609	+	transcript170.chr2.nic@HPCAL1	transcript170.chr2.nic	protein_coding	10302908,10396835,10408562,10419734,10422983,10426724	10303177,10396920,10408734,10420135,10423088,10427609	Gene ID= ENSG00000115756.12 TPM= 6.11 Transcript Type= NA
chr2	10302892	10427605	10302892	10427605	+	transcript171.chr2.nic@HPCAL1	transcript171.chr2.nic	protein_coding	10302892,10396835,10419734,10422983,10424525,10426724	10303177,10396920,10420135,10423088,10424613,10427605	Gene ID= ENSG00000115756.12 TPM= 2.25 Transcript Type= NA
chr2	10302907	10427609	10302907	10427609	+	ENST00000307845.7@HPCAL1	ENST00000307845.7	protein_coding	10302907,10396835,10419734,10422983,10426724	10303177,10396920,10420135,10423088,10427609	Gene ID= ENSG00000115756.12 TPM= 78.51 Transcript Type= protein_coding
chr2	10439968	10448504	10439968	10448504	-	ENST00000234111.8@ODC1	ENST00000234111.8	protein_coding	10448121,10445155,10444931,10444474,10444095,10443702,10443490,10443230,10442012,10441817,10441509,10439968	10448504,10445264,10445049,10444647,10444267,10443836,10443571,10443313,10442174,10441929,10441723,10440868	Gene ID= ENSG00000115758.12 TPM= 3.49 Transcript Type= protein_coding
chr2	10570766	10689972	10570766	10689972	-	ENST00000345985.7@NOL10	ENST00000345985.7	protein_coding	10689796,10684567,10681971,10675794,10673520,10671554,10668658,10667218,10662959,10659172,10654481,10644320,10607185,10603078,10602776,10600853,10589578,10589043,10577636,10570766	10689972,10684612,10682069,10675871,10673557,10671690,10668723,10667278,10663044,10659250,10654547,10644372,10607311,10603157,10602874,10600942,10589751,10589290,10577738,10572190	Gene ID= ENSG00000115761.15 TPM= 3.86 Transcript Type= protein_coding
chr2	10571655	10689967	10571655	10689967	-	ENST00000381685.9@NOL10	ENST00000381685.9	protein_coding	10689796,10684567,10681971,10675794,10673520,10671554,10668658,10667218,10662959,10659172,10657742,10654481,10644320,10607185,10603078,10602776,10600853,10589578,10589043,10577636,10571655	10689967,10684612,10682069,10675871,10673557,10671690,10668723,10667278,10663044,10659250,10657891,10654547,10644372,10607311,10603157,10602874,10600942,10589751,10589290,10577738,10572190	Gene ID= ENSG00000115761.15 TPM= 13.51 Transcript Type= protein_coding
chr2	10783393	10812839	10783393	10812839	-	ENST00000540494.5@PDIA6	ENST00000540494.5	protein_coding	10812678,10810243,10802499,10797700,10797081,10793096,10791795,10790719,10789749,10788897,10788697,10787281,10784934,10783393	10812839,10810420,10802640,10797757,10797207,10793202,10791925,10790833,10789889,10788981,10788769,10787439,10785030,10784326	Gene ID= ENSG00000143870.12 TPM= 6.11 Transcript Type= protein_coding
chr2	10783391	10812844	10783391	10812844	-	ENST00000272227.7@PDIA6	ENST00000272227.7	protein_coding	10812678,10802499,10797700,10797081,10793096,10791795,10790719,10789749,10788897,10788697,10787281,10784934,10783391	10812844,10802640,10797757,10797207,10793202,10791925,10790833,10789889,10788981,10788769,10787439,10785030,10784326	Gene ID= ENSG00000143870.12 TPM= 174.07 Transcript Type= protein_coding
chr2	11155372	11178874	11155372	11178874	+	ENST00000295083.7@PQLC3	ENST00000295083.7	protein_coding	11155372,11160466,11160625,11164204,11171925,11174968,11177737	11155689,11160548,11160694,11164261,11172045,11175009,11178874	Gene ID= ENSG00000162976.12 TPM= 8.69 Transcript Type= protein_coding
chr2	11164347	11167084	11164347	11167084	-	transcript214.chr2.nnic@NA	transcript214.chr2.nnic	NA	11164347	11167084	Gene ID= novel_gene_chr2_215 TPM= 1.93 Transcript Type= NA
chr2	11181632	11344716	11181632	11344716	-	transcript216.chr2.nnic@ROCK2	transcript216.chr2.nnic	protein_coding	11343996,11287655,11286539,11249661,11235702,11227254,11224322,11222083,11221198,11218966,11218455,11217090,11216158,11215510,11215321,11214840,11214357,11211681,11208287,11207726,11202052,11201310,11200957,11198681,11198491,11197526,11197180,11196687,11194955,11194256,11193779,11192451,11192148,11184666,11181632	11344716,11287736,11286639,11249798,11235962,11227398,11224460,11222174,11221357,11219026,11218466,11217169,11216206,11215645,11215412,11215086,11214463,11211840,11208447,11207910,11202121,11201413,11201143,11198774,11198585,11197705,11197348,11196863,11195025,11194344,11193857,11192712,11192361,11184769,11183440	Gene ID= ENSG00000134318.13 TPM= 7.72 Transcript Type= NA
chr2	11179761	11344585	11179761	11344585	-	ENST00000315872.10@ROCK2	ENST00000315872.10	protein_coding	11343996,11287655,11286539,11249661,11235702,11227254,11224322,11222083,11221198,11218966,11218455,11217090,11216158,11215510,11215321,11214840,11214357,11211681,11208287,11207726,11202052,11201310,11200957,11198681,11198491,11197526,11197180,11194955,11194256,11193779,11192451,11192148,11179761	11344585,11287736,11286639,11249798,11235962,11227398,11224460,11222174,11221357,11219026,11218466,11217169,11216206,11215645,11215412,11215086,11214463,11211840,11208447,11207910,11202121,11201413,11201143,11198774,11198585,11197705,11197348,11195025,11194344,11193857,11192712,11192361,11183440	Gene ID= ENSG00000134318.13 TPM= 6.44 Transcript Type= protein_coding
chr2	11420826	11426577	11420826	11426577	+	transcript245.chr2.nnic@NA	transcript245.chr2.nnic	NA	11420826,11421171,11426220	11420891,11421266,11426577	Gene ID= novel_gene_chr2_246 TPM= 3.86 Transcript Type= NA
chr2	11444375	11466177	11444375	11466177	-	ENST00000546212.2@E2F6	ENST00000546212.2	protein_coding	11465772,11453582,11451651,11450012,11447627,11444375	11466177,11453798,11451806,11450126,11447774,11446523	Gene ID= ENSG00000169016.16 TPM= 5.79 Transcript Type= protein_coding
chr2	11658178	11670229	11658178	11670229	-	transcript267.chr2.nnic@NTSR2	transcript267.chr2.nnic	protein_coding	11669506,11662025,11660043,11658178	11670229,11662240,11660133,11658722	Gene ID= ENSG00000169006.6 TPM= 1.93 Transcript Type= NA
chr2	11746602	11826530	11746602	11826530	+	transcript271.chr2.nnic@LPIN1	transcript271.chr2.nnic	protein_coding	11746602,11755747,11765533,11767763,11771372,11773620,11776086,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632	11746671,11755864,11765733,11767858,11771679,11773745,11776193,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11826530	Gene ID= ENSG00000134324.11 TPM= 9.09 Transcript Type= NA
chr2	11677544	11826530	11677544	11826530	+	transcript273.chr2.nic@LPIN1	transcript273.chr2.nic	protein_coding	11677544,11713756,11765533,11767763,11771372,11773620,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632	11677728,11713812,11765733,11767858,11771679,11773745,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11826530	Gene ID= ENSG00000134324.11 TPM= 7.93 Transcript Type= NA
chr2	11746580	11827405	11746580	11827405	+	transcript276.chr2.nic@LPIN1	transcript276.chr2.nic	protein_coding	11746580,11765533,11767763,11771372,11773620,11776086,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632	11746671,11765733,11767858,11771679,11773745,11776193,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11827405	Gene ID= ENSG00000134324.11 TPM= 41.31 Transcript Type= NA
chr2	11746580	11784313	11746580	11784313	+	transcript299.chr2.nic@LPIN1	transcript299.chr2.nic	protein_coding	11746580,11765533,11767763,11771372,11773620,11776086,11779519,11782201,11783829	11746671,11765733,11767858,11771679,11773745,11776193,11779645,11782507,11784313	Gene ID= ENSG00000134324.11 TPM= 6.95 Transcript Type= NA
chr2	11746588	11827409	11746588	11827409	+	ENST00000256720.6@LPIN1	ENST00000256720.6	protein_coding	11746588,11765533,11767763,11771372,11773620,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632	11746671,11765733,11767858,11771679,11773745,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11827409	Gene ID= ENSG00000134324.11 TPM= 30.14 Transcript Type= protein_coding
chr2	11746674	11748490	11746674	11748490	+	transcript311.chr2.nnic@NA	transcript311.chr2.nnic	NA	11746674	11748490	Gene ID= novel_gene_chr2_312 TPM= 1.93 Transcript Type= NA
chr2	11752435	11756683	11752435	11756683	-	transcript313.chr2.nnic@NA	transcript313.chr2.nnic	NA	11752435	11756683	Gene ID= novel_gene_chr2_314 TPM= 7.72 Transcript Type= NA
chr2	12716889	12742734	12716889	12742734	+	ENST00000155926.8@TRIB2	ENST00000155926.8	protein_coding	12716889,12723260,12740326	12718577,12723552,12742734	Gene ID= ENSG00000071575.11 TPM= 19.31 Transcript Type= protein_coding
chr2	15166909	15561330	15166909	15561330	-	ENST00000281513.9@NBAS	ENST00000281513.9	protein_coding	15561188,15558580,15556783,15554061,15553426,15551493,15539223,15536418,15534543,15511212,15504145,15488894,15478226,15475687,15474067,15473222,15468382,15467664,15467329,15461687,15461201,15427711,15424315,15417527,15415546,15402168,15396413,15394227,15383215,15379602,15374608,15366580,15356303,15353553,15351992,15330598,15328199,15327750,15309171,15308216,15292537,15287073,15276851,15275484,15238468,15234545,15232422,15218773,15190264,15186742,15178988,15166909	15561330,15558634,15556819,15554138,15553473,15551536,15539356,15536551,15534641,15511350,15504213,15489022,15478289,15475880,15474324,15473347,15468533,15467804,15467407,15461791,15461337,15427794,15424468,15417712,15415719,15402301,15396475,15394349,15383317,15379831,15374720,15366693,15356416,15353710,15352081,15330765,15328312,15327870,15309247,15308353,15292766,15287183,15277101,15275818,15238686,15234747,15232511,15218968,15190403,15186880,15179116,15167323	Gene ID= ENSG00000151779.12 TPM= 11.58 Transcript Type= protein_coding
chr2	15591847	15597440	15591847	15597440	+	transcript333.chr2.nic@DDX1	transcript333.chr2.nic	protein_coding	15591847,15595145,15595490,15596734,15597375	15591949,15595196,15595553,15596763,15597440	Gene ID= ENSG00000079785.14 TPM= 13.51 Transcript Type= NA
chr2	16549459	16665834	16549459	16665834	-	ENST00000381323.7@FAM49A	ENST00000381323.7	protein_coding	16665780,16623864,16588050,16565646,16563989,16562005,16561456,16561161,16560990,16559460,16555069,16549459	16665834,16624019,16588129,16565767,16564094,16562141,16561533,16561277,16561069,16559586,16555139,16552999	Gene ID= ENSG00000197872.11 TPM= 4.83 Transcript Type= protein_coding
chr2	17878678	17932961	17878678	17932961	+	ENST00000304101.8@KCNS3	ENST00000304101.8	protein_coding	17878678,17917680,17930950	17878806,17917871,17932961	Gene ID= ENSG00000170745.11 TPM= 44.4 Transcript Type= protein_coding
chr2	18554723	18560680	18554723	18560680	-	ENST00000381249.3@RDH14	ENST00000381249.3	protein_coding	18560180,18554723	18560680,18555808	Gene ID= ENSG00000240857.1 TPM= 64.68 Transcript Type= protein_coding
chr2	19351485	19358653	19351485	19358653	-	ENST00000272223.2@OSR1	ENST00000272223.2	protein_coding	19358341,19353141,19351485	19358653,19353837,19352410	Gene ID= ENSG00000143867.6 TPM= 1.93 Transcript Type= protein_coding
chr2	19896640	19901687	19896640	19901687	-	transcript369.chr2.nnic@TTC32	transcript369.chr2.nnic	protein_coding	19900760,19897869,19896640	19901687,19898035,19897126	Gene ID= ENSG00000183891.5 TPM= 1.93 Transcript Type= NA
chr2	19896753	19901694	19896753	19901694	-	transcript373.chr2.nnic@TTC32	transcript373.chr2.nnic	protein_coding	19901476,19897869,19896753	19901694,19898035,19897126	Gene ID= ENSG00000183891.5 TPM= 1.93 Transcript Type= NA
chr2	19896753	19901986	19896753	19901986	-	ENST00000333610.3@TTC32	ENST00000333610.3	protein_coding	19901706,19897869,19896753	19901986,19898035,19897126	Gene ID= ENSG00000183891.5 TPM= 2.9 Transcript Type= protein_coding
chr2	20032650	20052028	20032650	20052028	-	ENST00000175091.4@LAPTM4A	ENST00000175091.4	protein_coding	20051410,20040891,20037538,20037316,20034967,20034317,20032650	20052028,20041011,20037614,20037438,20035062,20034415,20033279	Gene ID= ENSG00000068697.6 TPM= 93.64 Transcript Type= protein_coding
chr2	20447074	20449445	20447074	20449445	+	ENST00000272233.5@RHOB	ENST00000272233.5	protein_coding	20447074	20449445	Gene ID= ENSG00000143878.9 TPM= 278.01 Transcript Type= protein_coding
chr2	20536580	20540030	20536580	20540030	-	transcript399.chr2.nnic@NA	transcript399.chr2.nnic	NA	20539870,20536580	20540030,20539505	Gene ID= novel_gene_chr2_400 TPM= 9.65 Transcript Type= NA
chr2	20539140	20540047	20539140	20540047	-	transcript403.chr2.nnic@NA	transcript403.chr2.nnic	NA	20539870,20539140	20540047,20539505	Gene ID= novel_gene_chr2_404 TPM= 7.72 Transcript Type= NA
chr2	20617822	20651089	20617822	20651089	-	ENST00000304031.7@HS1BP3	ENST00000304031.7	protein_coding	20651032,20645340,20640973,20638436,20624732,20623896,20617822	20651089,20645505,20641180,20638652,20624892,20624031,20619245	Gene ID= ENSG00000118960.12 TPM= 7.72 Transcript Type= protein_coding
chr2	23385217	23708606	23385217	23708606	+	ENST00000486442.5@KLHL29	ENST00000486442.5	protein_coding	23385217,23475560,23562152,23639139,23642338,23684399,23691674,23693269,23695623,23695951,23696333,23703186,23703719,23706481	23385780,23475667,23562481,23639280,23642850,23684537,23691876,23693528,23695821,23696133,23696513,23703379,23703863,23708606	Gene ID= ENSG00000119771.14 TPM= 25.1 Transcript Type= protein_coding
chr2	23642392	23697932	23642392	23697932	+	ENST00000288548.5@KLHL29	ENST00000288548.5	protein_coding	23642392,23684399,23691674,23693269,23695623,23695951,23696333	23642850,23684537,23691876,23693528,23695821,23696133,23697932	Gene ID= ENSG00000119771.14 TPM= 1.93 Transcript Type= protein_coding
chr2	23441532	23524425	23441532	23524425	-	transcript417.chr2.nnic@AC011239.1	transcript417.chr2.nnic	antisense_RNA	23523951,23467090,23441532	23524425,23467283,23441807	Gene ID= ENSG00000224361.1 TPM= 1.93 Transcript Type= NA
chr2	23504262	23524458	23504262	23524458	-	transcript421.chr2.nnic@AC011239.1	transcript421.chr2.nnic	antisense_RNA	23523951,23504262	23524458,23506318	Gene ID= ENSG00000224361.1 TPM= 3.86 Transcript Type= NA
chr2	23507043	23524344	23507043	23524344	-	ENST00000430988.1@AC011239.1	ENST00000430988.1	antisense_RNA	23523951,23507043	23524344,23507232	Gene ID= ENSG00000224361.1 TPM= 1.93 Transcript Type= antisense_RNA
chr2	23590779	23596514	23590779	23596514	-	transcript423.chr2.nnic@NA	transcript423.chr2.nnic	NA	23596303,23590779	23596514,23594600	Gene ID= novel_gene_chr2_424 TPM= 13.51 Transcript Type= NA
chr2	23853268	23927117	23853268	23927117	-	transcript431.chr2.nnic@ATAD2B	transcript431.chr2.nnic	protein_coding	23926555,23895819,23888350,23887832,23885727,23884765,23880639,23875829,23869663,23867835,23864809,23863381,23857415,23853268	23927117,23895970,23888399,23887985,23885829,23884873,23880755,23875904,23869761,23867946,23864924,23863555,23857503,23855721	Gene ID= ENSG00000119778.14 TPM= 1.93 Transcript Type= NA
chr2	23927350	23927598	23927350	23927598	+	transcript433.chr2.nnic@NA	transcript433.chr2.nnic	NA	23927350	23927598	Gene ID= novel_gene_chr2_434 TPM= 2.9 Transcript Type= NA
chr2	23940399	24000820	23940399	24000820	+	transcript435.chr2.nic@UBXN2A	transcript435.chr2.nic	protein_coding	23940399,23958301,23968919,23971276,23976969,23982896,23984673,23999672	23940648,23958355,23969035,23971414,23977075,23983033,23984831,24000820	Gene ID= ENSG00000173960.13 TPM= 2.65 Transcript Type= NA
chr2	23940453	24004906	23940453	24004906	+	transcript440.chr2.nnic@UBXN2A	transcript440.chr2.nnic	protein_coding	23940453,23958301,23971276,23976969,23982896,23984673,23999672,24004638	23940648,23958355,23971414,23977075,23983033,23984831,24000682,24004906	Gene ID= ENSG00000173960.13 TPM= 1.93 Transcript Type= NA
chr2	23940467	24000820	23940467	24000820	+	transcript443.chr2.nnic@UBXN2A	transcript443.chr2.nnic	protein_coding	23940467,23952470,23958301,23971276,23976969,23982896,23984673,23999672	23940648,23952587,23958355,23971414,23977075,23983033,23984831,24000820	Gene ID= ENSG00000173960.13 TPM= 2.65 Transcript Type= NA
chr2	23940457	24000826	23940457	24000826	+	transcript446.chr2.nnic@UBXN2A	transcript446.chr2.nnic	protein_coding	23940457,23958301,23971276,23976969,23982896,23984673,23999655	23940648,23958355,23971414,23977075,23983033,23984831,24000826	Gene ID= ENSG00000173960.13 TPM= 2.17 Transcript Type= NA
chr2	23940475	24000826	23940475	24000826	+	transcript452.chr2.nnic@UBXN2A	transcript452.chr2.nnic	protein_coding	23940475,23958301,23971276,23976969,23982896,23999672	23940648,23958355,23971414,23977075,23983033,24000826	Gene ID= ENSG00000173960.13 TPM= 2.17 Transcript Type= NA
chr2	24029340	24047353	24029340	24047353	-	ENST00000295148.8@WDCP	ENST00000295148.8	protein_coding	24047314,24037677,24032829,24029340	24047353,24039512,24032946,24031162	Gene ID= ENSG00000163026.11 TPM= 8.21 Transcript Type= protein_coding
chr2	24029347	24047361	24029347	24047361	-	ENST00000406895.3@WDCP	ENST00000406895.3	protein_coding	24047314,24037677,24029347	24047361,24039512,24031162	Gene ID= ENSG00000163026.11 TPM= 1.45 Transcript Type= protein_coding
chr2	24067584	24076443	24067584	24076443	-	ENST00000233468.4@SF3B6	ENST00000233468.4	protein_coding	24076200,24074076,24068321,24067584	24076443,24074194,24068459,24067851	Gene ID= ENSG00000115128.6 TPM= 63.23 Transcript Type= protein_coding
chr2	24067584	24076374	24067584	24076374	-	transcript460.chr2.nnic@SF3B6	transcript460.chr2.nnic	protein_coding	24076200,24068321,24067584	24076374,24068459,24067851	Gene ID= ENSG00000115128.6 TPM= 7.24 Transcript Type= NA
chr2	24123217	24169637	24123217	24169637	+	transcript461.chr2.nic@FAM228B	transcript461.chr2.nic	protein_coding	24123217,24124330,24135119,24137909,24139370,24146748,24146930,24161506,24164198,24169356	24123533,24124460,24135187,24138100,24139450,24146835,24147086,24161613,24164335,24169637	Gene ID= ENSG00000219626.8 TPM= 2.9 Transcript Type= NA
chr2	24271903	24360779	24271903	24360779	-	transcript475.chr2.nic@ITSN2	transcript475.chr2.nic	protein_coding	24360304,24328052,24315132,24313460,24312212,24310489,24310284,24308617,24303799,24301965,24301154,24299909,24298665,24295664,24293688,24286212,24284763,24275713,24271903	24360779,24328115,24315224,24313523,24312375,24310692,24310380,24308756,24303862,24302102,24301239,24300171,24298814,24295804,24293775,24286351,24284843,24275849,24271941	Gene ID= ENSG00000198399.14 TPM= 4.83 Transcript Type= NA
chr2	24275712	24360518	24275712	24360518	-	transcript480.chr2.nic@ITSN2	transcript480.chr2.nic	protein_coding	24360304,24328052,24315132,24313460,24312212,24310489,24310284,24308617,24303799,24301965,24301154,24299909,24298665,24295664,24293688,24286212,24275712	24360518,24328115,24315224,24313523,24312375,24310692,24310380,24308756,24303862,24302102,24301239,24300171,24298814,24295804,24293775,24286351,24275849	Gene ID= ENSG00000198399.14 TPM= 2.9 Transcript Type= NA
chr2	24491241	24492972	24491241	24492972	+	transcript495.chr2.nnic@NA	transcript495.chr2.nnic	NA	24491241	24492972	Gene ID= novel_gene_chr2_496 TPM= 10.62 Transcript Type= NA
chr2	24491248	24707682	24491248	24707682	+	transcript492.chr2.nnic@NCOA1	transcript492.chr2.nnic	protein_coding	24491248,24564295,24584476,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568	24491602,24564430,24584560,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707682	Gene ID= ENSG00000084676.15 TPM= 9.65 Transcript Type= NA
chr2	24768282	24770590	24768282	24770590	+	transcript497.chr2.nnic@NA	transcript497.chr2.nnic	NA	24768282	24770590	Gene ID= novel_gene_chr2_498 TPM= 5.79 Transcript Type= NA
chr2	24789734	24793382	24789734	24793382	-	ENST00000328379.5@PTRHD1	ENST00000328379.5	protein_coding	24793126,24789734	24793382,24790581	Gene ID= ENSG00000184924.5 TPM= 5.79 Transcript Type= protein_coding
chr2	24819169	24920225	24819169	24920225	-	transcript505.chr2.nic@ADCY3	transcript505.chr2.nic	protein_coding	24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24819169	24920225,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820114	Gene ID= ENSG00000138031.14 TPM= 10.62 Transcript Type= NA
chr2	24943636	24972094	24943636	24972094	-	ENST00000534855.5@DNAJC27	ENST00000534855.5	protein_coding	24971818,24967211,24963405,24957810,24957043,24943636	24972094,24967293,24963474,24957974,24957165,24947748	Gene ID= ENSG00000115137.11 TPM= 1.93 Transcript Type= protein_coding
chr2	25227855	25342590	25227855	25342590	-	ENST00000264709.7@DNMT3A	ENST00000264709.7	protein_coding	25342430,25313913,25300139,25282441,25275500,25274941,25248037,25247591,25247051,25246620,25246160,25246020,25245253,25244540,25244155,25243898,25241562,25240640,25240302,25239130,25236936,25235707,25227855	25342590,25314161,25300243,25282711,25275543,25275087,25248252,25247749,25247158,25246776,25246309,25246064,25245332,25244652,25244338,25243982,25241707,25240730,25240450,25239215,25237005,25235825,25234420	Gene ID= ENSG00000119772.16 TPM= 22.2 Transcript Type= protein_coding
chr2	25232976	25341970	25232976	25341970	-	transcript521.chr2.nic@DNMT3A	transcript521.chr2.nic	protein_coding	25341826,25313913,25300139,25282441,25275500,25274941,25248037,25247591,25247051,25246620,25246160,25246020,25245253,25244540,25244155,25243898,25240640,25240302,25239130,25236936,25235707,25232976	25341970,25314161,25300243,25282711,25275543,25275087,25248252,25247749,25247158,25246776,25246309,25246064,25245332,25244652,25244338,25243982,25240730,25240450,25239215,25237005,25235825,25234420	Gene ID= ENSG00000119772.16 TPM= 3.86 Transcript Type= NA
chr2	25281452	25341970	25281452	25341970	-	transcript524.chr2.nic@DNMT3A	transcript524.chr2.nic	protein_coding	25341826,25313913,25300139,25281452	25341970,25314161,25300243,25282711	Gene ID= ENSG00000119772.16 TPM= 2.9 Transcript Type= NA
chr2	25232976	25341885	25232976	25341885	-	ENST00000321117.9@DNMT3A	ENST00000321117.9	protein_coding	25341826,25313913,25300139,25282441,25275500,25274941,25248037,25247591,25247051,25246620,25246160,25246020,25245253,25244540,25244155,25243898,25241562,25240640,25240302,25239130,25236936,25235707,25232976	25341885,25314161,25300243,25282711,25275543,25275087,25248252,25247749,25247158,25246776,25246309,25246064,25245332,25244652,25244338,25243982,25241707,25240730,25240450,25239215,25237005,25235825,25234420	Gene ID= ENSG00000119772.16 TPM= 8.69 Transcript Type= protein_coding
chr2	25377243	25673634	25377243	25673634	-	ENST00000404103.7@DTNB	ENST00000404103.7	protein_coding	25673386,25652594,25639014,25628171,25607236,25596086,25580721,25576838,25531473,25482796,25455405,25451548,25433910,25432886,25427535,25419515,25388202,25383836,25379290,25377243	25673634,25652661,25639094,25628384,25607321,25596240,25580826,25577004,25531597,25482873,25455494,25451635,25433995,25432999,25427631,25419535,25388361,25383889,25379323,25377553	Gene ID= ENSG00000138101.18 TPM= 1.93 Transcript Type= protein_coding
chr2	26034110	26093843	26034110	26093843	+	transcript549.chr2.nnic@RAB10	transcript549.chr2.nnic	protein_coding	26034110,26093591	26034735,26093843	Gene ID= ENSG00000084733.10 TPM= 1.93 Transcript Type= NA
chr2	26034110	26137454	26034110	26137454	+	ENST00000264710.4@RAB10	ENST00000264710.4	protein_coding	26034110,26098662,26109768,26127144,26127850,26134938	26034735,26098722,26109906,26127233,26127951,26137454	Gene ID= ENSG00000084733.10 TPM= 196.92 Transcript Type= protein_coding
chr2	26173091	26189663	26173091	26189663	+	ENST00000401533.6@GAREM2	ENST00000401533.6	protein_coding	26173091,26176344,26182967,26184233,26186189,26187231	26173332,26176484,26183097,26185276,26186358,26189663	Gene ID= ENSG00000157833.12 TPM= 5.79 Transcript Type= protein_coding
chr2	26190635	26244726	26190635	26244726	-	ENST00000380649.7@HADHA	ENST00000380649.7	protein_coding	26244530,26239102,26238934,26236855,26234217,26232160,26230192,26215053,26214443,26212570,26209780,26204062,26201149,26197691,26195092,26194570,26193577,26192310,26191483,26190635	26244726,26239143,26239004,26236988,26234355,26232279,26230294,26215175,26214561,26212626,26209889,26204196,26201320,26197777,26195232,26194638,26193772,26192424,26191628,26191395	Gene ID= ENSG00000084754.10 TPM= 196.05 Transcript Type= protein_coding
chr2	26242470	26244805	26242470	26244805	-	transcript646.chr2.nnic@NA	transcript646.chr2.nnic	NA	26242470	26244805	Gene ID= novel_gene_chr2_647 TPM= 11.58 Transcript Type= NA
chr2	26244895	26290468	26244895	26290468	+	ENST00000317799.9@HADHB	ENST00000317799.9	protein_coding	26244895,26254247,26254430,26263380,26269953,26273651,26277073,26278614,26279135,26279994,26282845,26283004,26284117,26284883,26285407,26289918	26244990,26254318,26254474,26263479,26269997,26273750,26277160,26278801,26279315,26280115,26282924,26283051,26284204,26284957,26285571,26290468	Gene ID= ENSG00000138029.13 TPM= 1130.42 Transcript Type= protein_coding
chr2	26244926	26290412	26244926	26290412	+	ENST00000405867.7@HADHB	ENST00000405867.7	protein_coding	26244926,26254247,26254430,26263380,26269953,26273651,26277073,26279994,26282845,26283004,26284117,26284883,26285407,26289918	26244990,26254318,26254474,26263479,26269997,26273750,26277160,26280115,26282924,26283051,26284204,26284957,26285571,26290412	Gene ID= ENSG00000138029.13 TPM= 1.93 Transcript Type= protein_coding
chr2	26346114	26395891	26346114	26395891	+	ENST00000260585.11@SELENOI	ENST00000260585.11	protein_coding	26346114,26364302,26364832,26367146,26373367,26375040,26383299,26384959,26386354,26389005	26346289,26364370,26364940,26367220,26373629,26375148,26383347,26385139,26386536,26395891	Gene ID= ENSG00000138018.17 TPM= 1.93 Transcript Type= protein_coding
chr2	26779817	26781935	26779817	26781935	-	transcript659.chr2.nnic@NA	transcript659.chr2.nnic	NA	26779817	26781935	Gene ID= novel_gene_chr2_660 TPM= 37.65 Transcript Type= NA
chr2	26970612	27027196	26970612	27027196	+	ENST00000233121.6@MAPRE3	ENST00000233121.6	protein_coding	26970612,27022212,27023332,27024096,27025583,27025880,27026280	26970802,27022339,27023477,27024297,27025737,27026032,27027196	Gene ID= ENSG00000084764.10 TPM= 117.04 Transcript Type= protein_coding
chr2	26970658	27027196	26970658	27027196	+	ENST00000405074.7@MAPRE3	ENST00000405074.7	protein_coding	26970658,27022212,27023332,27024096,27025583,27025880,27026280	26970802,27022339,27023477,27024252,27025737,27026032,27027196	Gene ID= ENSG00000084764.10 TPM= 43.68 Transcript Type= protein_coding
chr2	27032954	27041695	27032954	27041695	+	ENST00000238788.13@TMEM214	ENST00000238788.13	protein_coding	27032954,27034067,27035135,27035594,27035970,27036487,27036705,27037077,27037561,27038146,27038484,27038702,27039047,27039741,27040030,27040345,27040711	27033166,27034266,27035285,27035728,27036052,27036592,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27039837,27040198,27040496,27041695	Gene ID= ENSG00000119777.18 TPM= 81.09 Transcript Type= protein_coding
chr2	27051678	27059535	27051678	27059535	+	ENST00000323064.12@AGBL5	ENST00000323064.12	protein_coding	27051678,27052913,27053402,27053896,27054630,27055075,27055682,27056623,27057303,27058400,27059190	27051793,27053173,27053573,27054059,27054807,27055253,27056138,27056792,27057438,27058602,27059535	Gene ID= ENSG00000084693.15 TPM= 9.65 Transcript Type= protein_coding
chr2	27070472	27071773	27070472	27071773	-	ENST00000456793.1@OST4	ENST00000456793.1	protein_coding	27071601,27071326,27070472	27071773,27071463,27070721	Gene ID= ENSG00000228474.5 TPM= 211.4 Transcript Type= protein_coding
chr2	27078567	27086408	27078567	27086408	+	ENST00000380320.8@EMILIN1	ENST00000380320.8	protein_coding	27078567,27080151,27080732,27082083,27084415,27084991,27085160,27085678	27079235,27080270,27080952,27084011,27084531,27085008,27085297,27086408	Gene ID= ENSG00000138080.13 TPM= 18.34 Transcript Type= protein_coding
chr2	27084558	27086397	27084558	27086397	+	transcript695.chr2.nnic@NA	transcript695.chr2.nnic	NA	27084558	27086397	Gene ID= novel_gene_chr2_696 TPM= 2.9 Transcript Type= NA
chr2	27100594	27119067	27100594	27119067	-	transcript681.chr2.nnic@CGREF1	transcript681.chr2.nnic	protein_coding	27118846,27110673,27104287,27102526,27102360,27102097,27101445,27100594	27119067,27110968,27104377,27102591,27102430,27102221,27101888,27101393	Gene ID= ENSG00000138028.15 TPM= 3.86 Transcript Type= NA
chr2	27100594	27119142	27100594	27119142	-	transcript687.chr2.nnic@CGREF1	transcript687.chr2.nnic	protein_coding	27118846,27104287,27102526,27102360,27102097,27101445,27100594	27119142,27104377,27102591,27102430,27102221,27101888,27101393	Gene ID= ENSG00000138028.15 TPM= 6.76 Transcript Type= NA
chr2	27098889	27119115	27098889	27119115	-	ENST00000402550.5@CGREF1	ENST00000402550.5	protein_coding	27118846,27104287,27102526,27102360,27102097,27098889	27119115,27104377,27102591,27102430,27102221,27099840	Gene ID= ENSG00000138028.15 TPM= 1.93 Transcript Type= protein_coding
chr2	27130756	27134675	27130756	27134675	-	ENST00000260643.6@PREB	ENST00000260643.6	protein_coding	27134287,27133532,27133117,27132843,27132603,27132230,27132010,27131672,27130756	27134675,27133721,27133337,27132923,27132727,27132403,27132082,27131831,27131508	Gene ID= ENSG00000138073.13 TPM= 306.17 Transcript Type= protein_coding
chr2	27130756	27134717	27130756	27134717	-	transcript713.chr2.nic@PREB	transcript713.chr2.nic	protein_coding	27134287,27133532,27133117,27132843,27132603,27132230,27132010,27130756	27134717,27133721,27133337,27132923,27132727,27132403,27132082,27131508	Gene ID= ENSG00000138073.13 TPM= 11.57 Transcript Type= NA
chr2	27130775	27134612	27130775	27134612	-	ENST00000406567.7@PREB	ENST00000406567.7	protein_coding	27134287,27133532,27133117,27132843,27132603,27132010,27131672,27130775	27134612,27133721,27133337,27132923,27132727,27132082,27131831,27131508	Gene ID= ENSG00000138073.13 TPM= 7.83 Transcript Type= protein_coding
chr2	27130756	27134629	27130756	27134629	-	ENST00000468045.5@PREB	ENST00000468045.5	protein_coding	27133117,27132843,27132603,27132230,27131672,27130756	27134629,27132923,27132727,27132403,27132082,27131508	Gene ID= ENSG00000138073.13 TPM= 2.3 Transcript Type= retained_intron
chr2	27199587	27211822	27199587	27211822	-	transcript724.chr2.nic@SLC5A6	transcript724.chr2.nic	protein_coding	27211767,27211467,27207258,27206877,27206483,27206026,27205350,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199587	27211822,27211533,27207790,27206942,27206534,27206093,27205504,27204931,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579	Gene ID= ENSG00000138074.14 TPM= 6.11 Transcript Type= NA
chr2	27199587	27211966	27199587	27211966	-	transcript725.chr2.nic@SLC5A6	transcript725.chr2.nic	protein_coding	27211900,27211467,27207258,27206877,27206483,27206026,27205350,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199587	27211966,27211533,27207790,27206942,27206534,27206093,27205504,27204931,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579	Gene ID= ENSG00000138074.14 TPM= 6.11 Transcript Type= NA
chr2	27199587	27212286	27199587	27212286	-	ENST00000310574.7@SLC5A6	ENST00000310574.7	protein_coding	27212020,27211467,27207258,27206877,27206483,27206026,27205350,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199587	27212286,27211533,27207790,27206942,27206534,27206093,27205504,27204931,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579	Gene ID= ENSG00000138074.14 TPM= 20.59 Transcript Type= protein_coding
chr2	27212370	27217178	27212370	27217178	+	ENST00000405489.7@ATRAID	ENST00000405489.7	protein_coding	27212370,27213177,27215321,27215474,27215632,27216523,27216844	27212607,27213298,27215392,27215545,27215753,27216620,27217178	Gene ID= ENSG00000138085.16 TPM= 44.4 Transcript Type= protein_coding
chr2	27282423	27307435	27282423	27307435	+	transcript758.chr2.nic@TRIM54	transcript758.chr2.nic	protein_coding	27282423,27298567,27299245,27304959,27305584,27306456,27306887	27282899,27298739,27299416,27305054,27306337,27306542,27307435	Gene ID= ENSG00000138100.13 TPM= 56.51 Transcript Type= NA
chr2	27282392	27307435	27282392	27307435	+	ENST00000380075.6@TRIM54	ENST00000380075.6	protein_coding	27282392,27298567,27299245,27304959,27305584,27306080,27306213,27306456,27306887	27282899,27298739,27299416,27305054,27305817,27306102,27306337,27306542,27307435	Gene ID= ENSG00000138100.13 TPM= 279.01 Transcript Type= protein_coding
chr2	27282462	27307439	27282462	27307439	+	ENST00000296098.4@TRIM54	ENST00000296098.4	protein_coding	27282462,27298567,27299245,27299530,27304959,27305584,27306080,27306213,27306456,27306887	27282899,27298739,27299416,27299655,27305054,27305817,27306102,27306337,27306542,27307439	Gene ID= ENSG00000138100.13 TPM= 33.5 Transcript Type= protein_coding
chr2	27301137	27303230	27301137	27303230	-	transcript775.chr2.nnic@NA	transcript775.chr2.nnic	NA	27301137	27303230	Gene ID= novel_gene_chr2_776 TPM= 26.06 Transcript Type= NA
chr2	27306986	27309398	27306986	27309398	+	transcript769.chr2.nnic@NA	transcript769.chr2.nnic	NA	27306986	27309398	Gene ID= novel_gene_chr2_770 TPM= 14.76 Transcript Type= NA
chr2	27309494	27323102	27309494	27323102	-	ENST00000380044.5@MPV17	ENST00000380044.5	protein_coding	27323052,27322448,27312994,27312680,27312494,27312214,27311899,27309494	27323102,27322522,27313109,27312772,27312589,27312246,27311951,27309981	Gene ID= ENSG00000115204.14 TPM= 1.93 Transcript Type= protein_coding
chr2	27311073	27313387	27311073	27313387	-	ENST00000616707.1@MPV17	ENST00000616707.1	protein_coding	27311073	27313387	Gene ID= ENSG00000115204.14 TPM= 22.2 Transcript Type= retained_intron
chr2	27325849	27357034	27325849	27357034	-	ENST00000264720.7@GTF3C2	ENST00000264720.7	protein_coding	27356739,27343308,27342826,27341948,27337926,27337481,27337244,27336198,27335917,27335598,27333974,27333655,27329379,27329121,27328844,27328468,27328037,27327177,27325849	27357034,27343578,27343147,27342233,27338020,27337558,27337342,27336425,27336028,27335706,27333999,27333784,27329523,27329282,27328931,27328596,27328189,27327284,27326893	Gene ID= ENSG00000115207.13 TPM= 27.99 Transcript Type= protein_coding
chr2	27364352	27370486	27364352	27370486	-	ENST00000347454.8@EIF2B4	ENST00000347454.8	protein_coding	27370284,27369876,27369414,27369006,27368654,27368372,27368025,27367746,27367457,27367074,27366759,27364718,27364352	27370486,27369919,27369549,27369212,27368733,27368463,27368139,27367822,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 139.28 Transcript Type= protein_coding
chr2	27364358	27370338	27364358	27370338	-	transcript811.chr2.nic@EIF2B4	transcript811.chr2.nic	protein_coding	27370284,27369414,27369006,27366759,27364718,27364358	27370338,27369919,27369212,27368733,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 4.3 Transcript Type= NA
chr2	27364399	27370326	27364399	27370326	-	ENST00000493344.6@EIF2B4	ENST00000493344.6	protein_coding	27369876,27369414,27369006,27368654,27368372,27368025,27367746,27367457,27367074,27366759,27364718,27364399	27370326,27369549,27369212,27368733,27368463,27368139,27367822,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 2.9 Transcript Type= protein_coding
chr2	27364363	27370300	27364363	27370300	-	ENST00000622434.4@EIF2B4	ENST00000622434.4	protein_coding	27370106,27369876,27369414,27369006,27368654,27368372,27368025,27367805,27367746,27367457,27367074,27366759,27364718,27364363	27370300,27369919,27369549,27369212,27368733,27368463,27368139,27367822,27367802,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 4.37 Transcript Type= protein_coding
chr2	27370522	27377128	27370522	27377128	+	ENST00000233575.6@SNX17	ENST00000233575.6	protein_coding	27370522,27371269,27372623,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606	27370806,27371343,27372740,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377128	Gene ID= ENSG00000115234.10 TPM= 162.24 Transcript Type= protein_coding
chr2	27370619	27377128	27370619	27377128	+	transcript816.chr2.nnic@SNX17	transcript816.chr2.nnic	protein_coding	27370619,27371269,27372623,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606	27370806,27371343,27372740,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376216,27376387,27376520,27377128	Gene ID= ENSG00000115234.10 TPM= 4.25 Transcript Type= NA
chr2	27370620	27377128	27370620	27377128	+	transcript818.chr2.nic@SNX17	transcript818.chr2.nic	protein_coding	27370620,27371269,27372623,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479	27370806,27371343,27372740,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27377128	Gene ID= ENSG00000115234.10 TPM= 4.25 Transcript Type= NA
chr2	27370620	27377128	27370620	27377128	+	transcript820.chr2.nic@SNX17	transcript820.chr2.nic	protein_coding	27370620,27371269,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606	27370806,27371343,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377128	Gene ID= ENSG00000115234.10 TPM= 4.89 Transcript Type= NA
chr2	27370628	27377123	27370628	27377123	+	ENST00000427123.5@SNX17	ENST00000427123.5	protein_coding	27370628,27371269,27372623,27373040,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606	27370806,27371343,27372740,27373113,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377123	Gene ID= ENSG00000115234.10 TPM= 5.86 Transcript Type= nonsense_mediated_decay
chr2	27374325	27377611	27374325	27377611	-	transcript833.chr2.nnic@NA	transcript833.chr2.nnic	NA	27374325	27377611	Gene ID= novel_gene_chr2_834 TPM= 1.93 Transcript Type= NA
chr2	27377235	27380765	27377235	27380765	-	transcript824.chr2.nic@ZNF513	transcript824.chr2.nic	protein_coding	27380472,27380093,27378884,27378467,27377235	27380765,27380248,27379054,27378615,27378371	Gene ID= ENSG00000163795.13 TPM= 6.76 Transcript Type= NA
chr2	27377235	27380765	27377235	27380765	-	transcript826.chr2.nnic@ZNF513	transcript826.chr2.nnic	protein_coding	27380472,27380093,27378884,27378467,27377235	27380765,27380248,27379054,27378777,27378371	Gene ID= ENSG00000163795.13 TPM= 3.86 Transcript Type= NA
chr2	27377235	27380730	27377235	27380730	-	transcript831.chr2.nnic@ZNF513	transcript831.chr2.nnic	protein_coding	27380093,27378467,27377235	27380730,27378615,27378371	Gene ID= ENSG00000163795.13 TPM= 1.93 Transcript Type= NA
chr2	27377231	27380725	27377231	27380725	-	ENST00000323703.10@ZNF513	ENST00000323703.10	protein_coding	27380472,27380093,27378467,27377231	27380725,27380248,27379054,27378371	Gene ID= ENSG00000163795.13 TPM= 18.82 Transcript Type= protein_coding
chr2	27377235	27380444	27377235	27380444	-	ENST00000407879.1@ZNF513	ENST00000407879.1	protein_coding	27380093,27378467,27377235	27380444,27379054,27378371	Gene ID= ENSG00000163795.13 TPM= 3.38 Transcript Type= protein_coding
chr2	27381194	27409642	27381194	27409642	-	transcript836.chr2.nnic@PPM1G	transcript836.chr2.nnic	protein_coding	27409303,27387089,27386194,27385747,27384673,27383952,27383366,27382476,27382126,27381194	27409642,27387158,27386279,27385879,27385088,27384092,27383600,27382605,27382228,27381721	Gene ID= ENSG00000115241.10 TPM= 9.49 Transcript Type= NA
chr2	27381194	27409687	27381194	27409687	-	ENST00000344034.4@PPM1G	ENST00000344034.4	protein_coding	27409303,27387089,27386194,27385747,27384673,27383952,27383366,27382476,27382126,27381194	27409687,27387158,27386279,27385879,27385088,27384092,27383600,27382605,27382228,27381805	Gene ID= ENSG00000115241.10 TPM= 264.66 Transcript Type= protein_coding
chr2	27427790	27442259	27427790	27442259	+	ENST00000233557.7@NRBP1	ENST00000233557.7	protein_coding	27427790,27428318,27433249,27433673,27433989,27434471,27434722,27435133,27436753,27437047,27437262,27439766,27440403,27440652,27440805,27441127,27441267,27441567,27441708	27428182,27428731,27433483,27433795,27434090,27434560,27434762,27435227,27436836,27437105,27437360,27439898,27440508,27440702,27440940,27441180,27441330,27441622,27442259	Gene ID= ENSG00000115216.13 TPM= 197.89 Transcript Type= protein_coding
chr2	27428653	27442255	27428653	27442255	+	ENST00000379863.7@NRBP1	ENST00000379863.7	protein_coding	27428653,27433254,27433673,27433989,27434471,27434722,27435133,27435723,27436753,27437047,27437262,27439766,27440403,27440652,27440805,27441127,27441267,27441567,27441708	27428731,27433483,27433795,27434090,27434560,27434762,27435227,27435746,27436836,27437105,27437360,27439898,27440508,27440702,27440940,27441180,27441330,27441622,27442255	Gene ID= ENSG00000115216.13 TPM= 5.79 Transcript Type= protein_coding
chr2	27428640	27442255	27428640	27442255	+	ENST00000379852.7@NRBP1	ENST00000379852.7	protein_coding	27428640,27433254,27433673,27433989,27434471,27434722,27435133,27436753,27437047,27437262,27439766,27440403,27440652,27440805,27441127,27441267,27441567,27441708	27428731,27433483,27433795,27434090,27434560,27434762,27435227,27436836,27437105,27437360,27439898,27440508,27440702,27440940,27441180,27441330,27441622,27442255	Gene ID= ENSG00000115216.13 TPM= 19.31 Transcript Type= protein_coding
chr2	27442381	27444297	27442381	27444297	+	ENST00000288873.7@KRTCAP3	ENST00000288873.7	protein_coding	27442381,27442579,27442842,27443074,27443398,27443949,27444186	27442440,27442763,27442901,27443280,27443532,27444061,27444297	Gene ID= ENSG00000157992.12 TPM= 1.93 Transcript Type= protein_coding
chr2	27444371	27489757	27444371	27489757	-	ENST00000260570.7@IFT172	ENST00000260570.7	protein_coding	27489615,27485360,27485018,27484227,27483872,27483580,27483289,27481046,27480026,27479509,27477995,27477559,27477217,27476641,27472250,27470928,27465746,27465411,27463097,27462701,27461759,27461269,27461015,27459709,27459378,27458779,27458126,27457841,27457639,27456511,27454567,27454354,27453982,27453630,27453384,27449998,27449691,27449499,27449294,27448915,27447812,27447515,27446260,27445929,27445745,27445296,27445014,27444371	27489757,27485503,27485130,27484266,27483937,27483659,27483376,27481260,27480149,27479604,27478156,27477612,27477320,27476726,27472362,27471095,27465882,27465518,27463181,27462793,27461836,27461517,27461093,27459829,27459522,27458868,27458223,27457976,27457755,27456653,27454660,27454418,27454162,27453739,27453513,27450096,27449800,27449562,27449380,27449031,27447922,27447634,27446355,27445988,27445843,27445449,27445105,27444521	Gene ID= ENSG00000138002.14 TPM= 1.93 Transcript Type= protein_coding
chr2	27491883	27495245	27491883	27495245	-	ENST00000264703.3@FNDC4	ENST00000264703.3	protein_coding	27494878,27494547,27494351,27493930,27493389,27492666,27491883	27495245,27494703,27494466,27494134,27493478,27492790,27492478	Gene ID= ENSG00000115226.9 TPM= 2.9 Transcript Type= protein_coding
chr2	27583030	27623215	27583030	27623215	+	ENST00000355467.5@ZNF512	ENST00000355467.5	protein_coding	27583030,27583658,27598067,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153	27583142,27583716,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623215	Gene ID= ENSG00000243943.9 TPM= 3.86 Transcript Type= protein_coding
chr2	27583030	27623094	27583030	27623094	+	ENST00000379717.5@ZNF512	ENST00000379717.5	protein_coding	27583030,27583658,27598070,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153	27583142,27583716,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623094	Gene ID= ENSG00000243943.9 TPM= 5.79 Transcript Type= protein_coding
chr2	27582969	27623215	27582969	27623215	+	ENST00000556601.5@ZNF512	ENST00000556601.5	protein_coding	27582969,27598067,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153	27583142,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623215	Gene ID= ENSG00000243943.9 TPM= 2.9 Transcript Type= protein_coding
chr2	27628996	27651508	27628996	27651508	+	ENST00000264718.7@GPN1	ENST00000264718.7	protein_coding	27628996,27629859,27631027,27631834,27632633,27634846,27635140,27638210,27638885,27640043,27641240,27642429,27647836,27650115	27629169,27629952,27631066,27631900,27632670,27634924,27635234,27638255,27639031,27640125,27641279,27642519,27647943,27651508	Gene ID= ENSG00000198522.13 TPM= 5.79 Transcript Type= protein_coding
chr2	27629013	27650846	27629013	27650846	+	transcript878.chr2.nic@GPN1	transcript878.chr2.nic	protein_coding	27629013,27629859,27632633,27634846,27635140,27638210,27638885,27640043,27641240,27642429,27647836,27650115	27629169,27629952,27632670,27634924,27635234,27638255,27639031,27640125,27641279,27642519,27647943,27650846	Gene ID= ENSG00000198522.13 TPM= 2.9 Transcript Type= NA
chr2	27650812	27663809	27650812	27663809	-	ENST00000337768.9@SUPT7L	ENST00000337768.9	protein_coding	27663329,27662179,27660984,27657345,27655365,27650812	27663809,27662281,27661388,27657669,27655602,27653747	Gene ID= ENSG00000119760.15 TPM= 1.45 Transcript Type= protein_coding
chr2	27653063	27663639	27653063	27663639	-	ENST00000405491.5@SUPT7L	ENST00000405491.5	protein_coding	27663329,27662179,27660984,27657345,27655365,27653063	27663639,27662281,27661601,27657669,27655602,27653747	Gene ID= ENSG00000119760.15 TPM= 3.86 Transcript Type= protein_coding
chr2	27650812	27663840	27650812	27663840	-	ENST00000404798.6@SUPT7L	ENST00000404798.6	protein_coding	27663329,27662179,27657345,27655365,27650812	27663840,27662281,27657669,27655602,27653747	Gene ID= ENSG00000119760.15 TPM= 1.45 Transcript Type= protein_coding
chr2	27653052	27663640	27653052	27663640	-	ENST00000406540.5@SUPT7L	ENST00000406540.5	protein_coding	27663329,27660984,27657345,27655365,27653052	27663640,27662281,27657669,27655602,27653747	Gene ID= ENSG00000119760.15 TPM= 2.9 Transcript Type= protein_coding
chr2	27663410	27685119	27663410	27685119	+	transcript881.chr2.nic@SLC4A1AP	transcript881.chr2.nic	protein_coding	27663410,27665100,27667268,27668843,27669248,27675532,27677295,27677738,27682248,27685037	27664577,27665295,27667390,27668903,27669387,27675692,27677364,27677924,27682359,27685119	Gene ID= ENSG00000163798.13 TPM= 45.69 Transcript Type= NA
chr2	27754829	27756109	27754829	27756109	+	transcript907.chr2.nnic@NA	transcript907.chr2.nnic	NA	27754829	27756109	Gene ID= novel_gene_chr2_908 TPM= 2.9 Transcript Type= NA
chr2	27771717	27779734	27771717	27779734	+	ENST00000379666.7@MRPL33	ENST00000379666.7	protein_coding	27771717,27772674,27779433	27771799,27772692,27779734	Gene ID= ENSG00000243147.7 TPM= 208.83 Transcript Type= protein_coding
chr2	27771717	27779741	27771717	27779741	+	ENST00000296102.7@MRPL33	ENST00000296102.7	protein_coding	27771717,27772674,27774424,27779433	27771799,27772692,27774530,27779741	Gene ID= ENSG00000243147.7 TPM= 246.47 Transcript Type= protein_coding
chr2	27771975	27779731	27771975	27779731	+	ENST00000483992.5@MRPL33	ENST00000483992.5	protein_coding	27771975,27772674,27779433	27772385,27772692,27779731	Gene ID= ENSG00000243147.7 TPM= 5.79 Transcript Type= processed_transcript
chr2	27781364	27891098	27781364	27891098	-	ENST00000302188.7@RBKS	ENST00000302188.7	protein_coding	27890257,27858439,27848034,27847042,27843067,27832686,27827567,27781364	27891098,27858571,27848097,27847104,27843231,27832777,27827755,27781788	Gene ID= ENSG00000171174.13 TPM= 1.93 Transcript Type= protein_coding
chr2	27890713	28338901	27890713	28338901	+	transcript927.chr2.nnic@BABAM2	transcript927.chr2.nnic	protein_coding	27890713,27894533,27929832,27987993,28025226,28045725,28129271,28241323,28244780,28298338,28338450	27890842,27894684,27929908,27988087,28025420,28045799,28129380,28241393,28244862,28298491,28338901	Gene ID= ENSG00000158019.20 TPM= 5.41 Transcript Type= NA
chr2	27890750	28338901	27890750	28338901	+	ENST00000379624.5@BABAM2	ENST00000379624.5	protein_coding	27890750,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28338450	27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28338901	Gene ID= ENSG00000158019.20 TPM= 35.33 Transcript Type= protein_coding
chr2	27890729	28338901	27890729	28338901	+	ENST00000344773.6@BABAM2	ENST00000344773.6	protein_coding	27890729,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28327274,28338450	27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28327447,28338901	Gene ID= ENSG00000158019.20 TPM= 16.51 Transcript Type= protein_coding
chr2	27890792	28338901	27890792	28338901	+	ENST00000342045.6@BABAM2	ENST00000342045.6	protein_coding	27890792,27892383,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28338450	27890842,27892448,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28338901	Gene ID= ENSG00000158019.20 TPM= 6.85 Transcript Type= protein_coding
chr2	27890793	28338901	27890793	28338901	+	ENST00000361704.6@BABAM2	ENST00000361704.6	protein_coding	27890793,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28310082,28338450	27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28310153,28338901	Gene ID= ENSG00000158019.20 TPM= 4.44 Transcript Type= protein_coding
chr2	28391867	28412967	28391867	28412967	+	transcript938.chr2.nnic@FOSL2	transcript938.chr2.nnic	protein_coding	28391867,28404107,28408759,28410112,28411930	28393822,28404358,28408866,28410225,28412967	Gene ID= ENSG00000075426.11 TPM= 8.21 Transcript Type= NA
chr2	28392858	28417312	28392858	28417312	+	ENST00000264716.8@FOSL2	ENST00000264716.8	protein_coding	28392858,28404107,28408759,28411930	28393822,28404358,28408866,28417312	Gene ID= ENSG00000075426.11 TPM= 130.32 Transcript Type= protein_coding
chr2	28394148	28397204	28394148	28397204	+	transcript949.chr2.nnic@NA	transcript949.chr2.nnic	NA	28394148	28397204	Gene ID= novel_gene_chr2_950 TPM= 3.86 Transcript Type= NA
chr2	28397170	28400286	28397170	28400286	-	transcript957.chr2.nnic@NA	transcript957.chr2.nnic	NA	28397170	28400286	Gene ID= novel_gene_chr2_958 TPM= 1.93 Transcript Type= NA
chr2	28416951	28420398	28416951	28420398	-	transcript959.chr2.nnic@NA	transcript959.chr2.nnic	NA	28416951	28420398	Gene ID= novel_gene_chr2_960 TPM= 11.58 Transcript Type= NA
chr2	28722294	28751715	28722294	28751715	-	transcript990.chr2.nnic@AC092164.1	transcript990.chr2.nnic	antisense_RNA	28751643,28749570,28748820,28747933,28722294	28751715,28750385,28748963,28747982,28723006	Gene ID= ENSG00000226833.5 TPM= 1.93 Transcript Type= NA
chr2	28751814	28801648	28751814	28801648	+	ENST00000296122.10@PPP1CB	ENST00000296122.10	protein_coding	28751814,28752038,28776851,28778809,28781738,28783907,28788658,28793863,28799199	28751924,28752176,28776982,28779039,28781842,28783978,28788809,28793997,28801648	Gene ID= ENSG00000213639.9 TPM= 22.68 Transcript Type= protein_coding
chr2	28751748	28802930	28751748	28802930	+	ENST00000358506.6@PPP1CB	ENST00000358506.6	protein_coding	28751748,28752038,28776851,28778809,28781738,28783907,28788658,28793863,28799199	28751820,28752176,28776982,28779039,28781842,28783978,28788809,28793997,28802930	Gene ID= ENSG00000213639.9 TPM= 57.68 Transcript Type= protein_coding
chr2	28751853	28802940	28751853	28802940	+	ENST00000395366.2@PPP1CB	ENST00000395366.2	protein_coding	28751853,28776851,28778809,28781738,28783907,28788658,28793863,28799199	28752176,28776982,28779039,28781842,28783978,28788809,28793997,28802940	Gene ID= ENSG00000213639.9 TPM= 158.07 Transcript Type= protein_coding
chr2	28849821	28870301	28849821	28870301	-	ENST00000306108.9@TRMT61B	ENST00000306108.9	protein_coding	28869579,28865017,28861118,28852408,28851072,28850328,28849821	28870301,28865119,28861308,28852499,28851298,28850405,28850242	Gene ID= ENSG00000171103.10 TPM= 11.58 Transcript Type= protein_coding
chr2	28894608	28948216	28894608	28948216	+	transcript1008.chr2.nic@WDR43	transcript1008.chr2.nic	protein_coding	28894608,28901987,28906460,28912590,28914069,28917893,28922919,28924982,28926468,28927569,28929579,28935521,28936922,28937931,28941461,28942312,28946450	28894923,28902124,28906581,28912710,28914208,28917995,28922983,28925153,28926554,28927700,28929710,28935607,28936953,28937994,28941574,28942381,28948216	Gene ID= ENSG00000163811.11 TPM= 2.9 Transcript Type= NA
chr2	28894677	28948222	28894677	28948222	+	transcript1012.chr2.nnic@WDR43	transcript1012.chr2.nnic	protein_coding	28894677,28906460,28912590,28914069,28917893,28922919,28924982,28926468,28927569,28929579,28935521,28936922,28937931,28941461,28942312,28946450,28946600	28894923,28906581,28912710,28914208,28917995,28922983,28925153,28926554,28927700,28929710,28935607,28936953,28937994,28941574,28942381,28946499,28948222	Gene ID= ENSG00000163811.11 TPM= 3.86 Transcript Type= NA
chr2	28894643	28948222	28894643	28948222	+	ENST00000407426.7@WDR43	ENST00000407426.7	protein_coding	28894643,28901987,28906460,28912590,28914069,28917893,28922919,28924982,28926468,28927569,28929579,28935521,28936922,28937931,28941461,28942312,28946450,28946600	28894923,28902124,28906581,28912710,28914208,28917995,28922983,28925153,28926554,28927700,28929710,28935607,28936953,28937994,28941574,28942381,28946499,28948222	Gene ID= ENSG00000163811.11 TPM= 66.61 Transcript Type= protein_coding
chr2	29014345	29052230	29014345	29052230	+	transcript1023.chr2.nnic@TOGARAM2	transcript1023.chr2.nnic	protein_coding	29014345,29017154,29017792,29022158,29023086,29024139,29026853,29032934,29033469,29035464,29036541,29045324,29046647,29051756	29014561,29017304,29017956,29022308,29023191,29024374,29027011,29033051,29033563,29035656,29036757,29045410,29046718,29052230	Gene ID= ENSG00000189350.12 TPM= 24.13 Transcript Type= NA
chr2	29014467	29052230	29014467	29052230	+	ENST00000465300.5@TOGARAM2	ENST00000465300.5	protein_coding	29014467,29022158,29023086,29024139,29026853,29032934,29033469,29035464,29036541,29045324,29051756	29014561,29022308,29023191,29024374,29027011,29033051,29033563,29035656,29036757,29045410,29052230	Gene ID= ENSG00000189350.12 TPM= 23.17 Transcript Type= processed_transcript
chr2	29008100	29009827	29008100	29009827	-	transcript1060.chr2.nnic@NA	transcript1060.chr2.nnic	NA	29008100	29009827	Gene ID= novel_gene_chr2_1061 TPM= 1.93 Transcript Type= NA
chr2	29010794	29015873	29010794	29015873	-	transcript1041.chr2.nnic@NA	transcript1041.chr2.nnic	NA	29013396,29012889,29010794	29015873,29013130,29011967	Gene ID= novel_gene_chr2_1042 TPM= 4.83 Transcript Type= NA
chr2	29013353	29015875	29013353	29015875	-	transcript1048.chr2.nnic@NA	transcript1048.chr2.nnic	NA	29015014,29013353	29015875,29014565	Gene ID= novel_gene_chr2_1049 TPM= 8.69 Transcript Type= NA
chr2	29013358	29015875	29013358	29015875	-	transcript1046.chr2.nnic@NA	transcript1046.chr2.nnic	NA	29015014,29014416,29013358	29015875,29014565,29013912	Gene ID= novel_gene_chr2_1047 TPM= 4.83 Transcript Type= NA
chr2	29019179	29021071	29019179	29021071	-	transcript1062.chr2.nnic@NA	transcript1062.chr2.nnic	NA	29019179	29021071	Gene ID= novel_gene_chr2_1063 TPM= 6.76 Transcript Type= NA
chr2	29024920	29027609	29024920	29027609	+	transcript1052.chr2.nnic@NA	transcript1052.chr2.nnic	NA	29024920	29027609	Gene ID= novel_gene_chr2_1053 TPM= 12.55 Transcript Type= NA
chr2	29030261	29032280	29030261	29032280	-	transcript1058.chr2.nnic@NA	transcript1058.chr2.nnic	NA	29030261	29032280	Gene ID= novel_gene_chr2_1059 TPM= 4.83 Transcript Type= NA
chr2	29115459	29183813	29115459	29183813	+	transcript1071.chr2.nic@CLIP4	transcript1071.chr2.nic	protein_coding	29115459,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204,29160333,29163831,29167476,29174373,29181572	29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29157402,29160467,29163954,29167540,29174445,29183813	Gene ID= ENSG00000115295.19 TPM= 3.86 Transcript Type= NA
chr2	29115358	29174713	29115358	29174713	+	transcript1077.chr2.nic@CLIP4	transcript1077.chr2.nic	protein_coding	29115358,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204,29160333,29163831,29167476,29174373	29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29157347,29160467,29163954,29167540,29174713	Gene ID= ENSG00000115295.19 TPM= 9.65 Transcript Type= NA
chr2	29115418	29183805	29115418	29183805	+	transcript1081.chr2.nnic@CLIP4	transcript1081.chr2.nnic	protein_coding	29115418,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204,29160333,29163831,29167476,29181572	29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29157347,29160467,29163954,29167540,29183805	Gene ID= ENSG00000115295.19 TPM= 3.86 Transcript Type= NA
chr2	29115483	29183813	29115483	29183813	+	transcript1084.chr2.nnic@CLIP4	transcript1084.chr2.nnic	protein_coding	29115483,29121374,29131258,29132152,29133655,29135548,29143709,29152685,29156354,29157204,29160333,29163831,29167476,29174373,29181572	29115665,29121521,29131397,29132245,29133816,29135666,29143945,29152828,29156443,29157347,29160467,29163954,29167540,29174445,29183813	Gene ID= ENSG00000115295.19 TPM= 3.86 Transcript Type= NA
chr2	29115415	29167876	29115415	29167876	+	transcript1085.chr2.nic@CLIP4	transcript1085.chr2.nic	protein_coding	29115415,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204,29160333,29163831,29167476	29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29157347,29160467,29163954,29167876	Gene ID= ENSG00000115295.19 TPM= 4.83 Transcript Type= NA
chr2	29115426	29183813	29115426	29183813	+	ENST00000320081.9@CLIP4	ENST00000320081.9	protein_coding	29115426,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204,29160333,29163831,29167476,29174373,29181572	29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29157347,29160467,29163954,29167540,29174445,29183813	Gene ID= ENSG00000115295.19 TPM= 101.36 Transcript Type= protein_coding
chr2	30146941	30160533	30146941	30160533	+	ENST00000379519.7@YPEL5	ENST00000379519.7	protein_coding	30146941,30148245,30156628,30158619	30147062,30148541,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 4.51 Transcript Type= protein_coding
chr2	30146966	30160533	30146966	30160533	+	transcript1099.chr2.nnic@YPEL5	transcript1099.chr2.nnic	protein_coding	30146966,30155850,30156628,30158619	30147062,30155910,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 2.58 Transcript Type= NA
chr2	30146961	30160533	30146961	30160533	+	ENST00000261353.8@YPEL5	ENST00000261353.8	protein_coding	30146961,30156628,30158619	30147062,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 34.43 Transcript Type= protein_coding
chr2	30152892	30156563	30152892	30156563	-	transcript1103.chr2.nnic@NA	transcript1103.chr2.nnic	NA	30152892	30156563	Gene ID= novel_gene_chr2_1104 TPM= 2.9 Transcript Type= NA
chr2	30231531	30260028	30231531	30260028	+	ENST00000395323.7@LBH	ENST00000395323.7	protein_coding	30231531,30234405,30257433	30231764,30234507,30260028	Gene ID= ENSG00000213626.11 TPM= 16.41 Transcript Type= protein_coding
chr2	30231532	30235705	30231532	30235705	+	transcript1106.chr2.nic@LBH	transcript1106.chr2.nic	protein_coding	30231532,30234405	30231764,30235705	Gene ID= ENSG00000213626.11 TPM= 1.93 Transcript Type= NA
chr2	30447236	30644224	30447236	30644224	+	transcript1107.chr2.nic@LCLAT1	transcript1107.chr2.nic	protein_coding	30447236,30459552,30525587,30533116,30562146,30568060,30640117	30447383,30459722,30525755,30533314,30562292,30568176,30644224	Gene ID= ENSG00000172954.13 TPM= 15.13 Transcript Type= NA
chr2	30447236	30644224	30447236	30644224	+	ENST00000379509.7@LCLAT1	ENST00000379509.7	protein_coding	30447236,30525587,30533116,30562146,30568060,30640117	30447383,30525755,30533314,30562292,30568176,30644224	Gene ID= ENSG00000172954.13 TPM= 15.13 Transcript Type= protein_coding
chr2	30447257	30644225	30447257	30644225	+	ENST00000309052.8@LCLAT1	ENST00000309052.8	protein_coding	30447257,30459552,30525587,30533116,30562146,30568060,30640117	30447404,30459722,30525755,30533314,30562292,30568176,30644225	Gene ID= ENSG00000172954.13 TPM= 15.13 Transcript Type= protein_coding
chr2	31867823	32010660	31867823	32010660	-	transcript1115.chr2.nic@MEMO1	transcript1115.chr2.nic	protein_coding	32010187,31943302,31932067,31920798,31917926,31893242,31891992,31883386,31869848,31867823	32010660,31943383,31932135,31920910,31918037,31893321,31892134,31883462,31869952,31868492	Gene ID= ENSG00000162959.13 TPM= 5.6 Transcript Type= NA
chr2	31867823	32010660	31867823	32010660	-	transcript1121.chr2.nic@MEMO1	transcript1121.chr2.nic	protein_coding	32010187,31943302,31932067,31920798,31917926,31891992,31869848,31867823	32010660,31943383,31932135,31920910,31918037,31892134,31869952,31868492	Gene ID= ENSG00000162959.13 TPM= 2.7 Transcript Type= NA
chr2	31867188	32010660	31867188	32010660	-	transcript1122.chr2.nic@MEMO1	transcript1122.chr2.nic	protein_coding	32010187,31943302,31932067,31920798,31917926,31869848,31867188	32010660,31943383,31932135,31920910,31918037,31869952,31868492	Gene ID= ENSG00000162959.13 TPM= 3.67 Transcript Type= NA
chr2	31916518	32010660	31916518	32010660	-	transcript1127.chr2.nic@MEMO1	transcript1127.chr2.nic	protein_coding	32010187,31943302,31932067,31920798,31916518	32010660,31943383,31932135,31920910,31918037	Gene ID= ENSG00000162959.13 TPM= 6.56 Transcript Type= NA
chr2	32003715	32005334	32003715	32005334	+	transcript1129.chr2.nnic@NA	transcript1129.chr2.nnic	NA	32003715	32005334	Gene ID= novel_gene_chr2_1130 TPM= 1.93 Transcript Type= NA
chr2	32023892	32039812	32023892	32039812	-	ENST00000342166.9@DPY30	ENST00000342166.9	protein_coding	32039733,32039421,32039279,32029594,32023892	32039812,32039492,32039326,32029736,32024256	Gene ID= ENSG00000162961.13 TPM= 9.65 Transcript Type= protein_coding
chr2	32011886	32039754	32011886	32039754	-	ENST00000452582.5@DPY30	ENST00000452582.5	protein_coding	32039733,32039421,32039279,32029594,32023677,32023422,32011886	32039754,32039492,32039326,32029736,32023808,32023474,32012052	Gene ID= ENSG00000162961.13 TPM= 1.93 Transcript Type= processed_transcript
chr2	32063611	32157636	32063611	32157636	+	ENST00000615843.4@SPAST	ENST00000615843.4	protein_coding	32063611,32087492,32089522,32098796,32114638,32115702,32116119,32126948,32128408,32136563,32136877,32137109,32141904,32143336,32144937,32147218,32154374	32064246,32087578,32089605,32098891,32114825,32115835,32116212,32127022,32128479,32136638,32136968,32137188,32141946,32143415,32145007,32147258,32157636	Gene ID= ENSG00000021574.11 TPM= 1.93 Transcript Type= protein_coding
chr2	32063611	32157636	32063611	32157636	+	ENST00000345662.5@SPAST	ENST00000345662.5	protein_coding	32063611,32087492,32089522,32114638,32115702,32116119,32126948,32128408,32136563,32136877,32137109,32141904,32143336,32144937,32147218,32154374	32064246,32087578,32089605,32114825,32115835,32116212,32127022,32128479,32136638,32136968,32137188,32141946,32143415,32145007,32147258,32157636	Gene ID= ENSG00000021574.11 TPM= 5.79 Transcript Type= protein_coding
chr2	32165864	32224379	32165864	32224379	+	ENST00000282587.9@SLC30A6	ENST00000282587.9	protein_coding	32165864,32171287,32174063,32175319,32184273,32192336,32192918,32193889,32197344,32197707,32204590,32206886,32209493,32220213	32165903,32171373,32174147,32175361,32184338,32192416,32192953,32193983,32197392,32197826,32204692,32206933,32209561,32224379	Gene ID= ENSG00000152683.14 TPM= 1.93 Transcript Type= protein_coding
chr2	32198137	32199610	32198137	32199610	+	transcript1145.chr2.nnic@NA	transcript1145.chr2.nnic	NA	32198137	32199610	Gene ID= novel_gene_chr2_1146 TPM= 1.93 Transcript Type= NA
chr2	32277898	32307954	32277898	32307954	+	transcript1156.chr2.nnic@YIPF4	transcript1156.chr2.nnic	protein_coding	32277898,32290483,32292177,32301382,32305489	32278234,32290636,32292348,32301495,32307954	Gene ID= ENSG00000119820.10 TPM= 3.86 Transcript Type= NA
chr2	32355872	32358017	32355872	32358017	-	transcript1164.chr2.nnic@NA	transcript1164.chr2.nnic	NA	32355872	32358017	Gene ID= novel_gene_chr2_1165 TPM= 1.93 Transcript Type= NA
chr2	32357028	32618899	32357028	32618899	+	ENST00000421745.6@BIRC6	ENST00000421745.6	protein_coding	32357028,32377588,32380153,32388750,32392039,32395511,32401163,32401463,32406499,32414769,32429146,32430865,32433644,32435496,32436053,32439508,32441329,32442065,32442324,32443491,32445521,32448795,32453808,32463194,32464509,32465065,32467525,32467903,32468437,32469395,32470168,32471014,32473112,32476213,32477368,32478635,32479462,32481320,32482429,32485643,32487647,32488588,32490041,32491425,32493540,32499547,32501713,32502795,32503042,32505005,32507980,32509738,32510526,32512933,32514990,32518254,32518817,32524888,32525464,32529651,32531355,32543241,32545643,32547850,32549313,32575156,32593915,32595034,32597751,32599739,32603006,32607455,32611448,32617725	32357486,32377769,32380290,32388943,32392150,32395593,32401385,32401623,32406557,32416163,32429295,32431090,32433804,32435585,32436184,32439686,32441462,32442226,32442455,32443588,32445668,32448928,32453942,32463381,32464823,32465164,32467739,32468111,32468783,32469614,32470301,32471124,32473239,32476344,32477583,32478818,32479617,32481453,32482582,32485759,32487801,32488714,32490151,32491558,32493667,32500109,32501888,32502891,32503236,32505205,32508259,32509994,32510634,32513154,32515770,32518397,32518946,32525019,32525628,32529824,32531551,32543541,32545860,32548014,32549481,32575366,32594060,32595144,32597968,32599900,32603083,32607643,32611582,32618899	Gene ID= ENSG00000115760.13 TPM= 2.9 Transcript Type= protein_coding
chr2	32628032	32821051	32628032	32821051	+	transcript1169.chr2.nnic@TTC27	transcript1169.chr2.nnic	protein_coding	32628032,32630523,32633876,32640270,32650131,32664303,32666635,32672272,32678856,32702807,32733828,32758292,32777882,32782626,32786984,32811024,32812504,32817457,32820816	32628380,32630700,32634005,32640410,32650233,32664467,32666768,32672384,32678922,32702920,32733923,32758519,32777980,32782678,32787149,32811221,32812615,32817557,32821051	Gene ID= ENSG00000018699.11 TPM= 1.93 Transcript Type= NA
chr2	32628098	32821051	32628098	32821051	+	transcript1170.chr2.nnic@TTC27	transcript1170.chr2.nnic	protein_coding	32628098,32630523,32633876,32640270,32650131,32664303,32666635,32672272,32678856,32702807,32733828,32736694,32758292,32777882,32782626,32786984,32817457,32820816	32628380,32630700,32634005,32640410,32650233,32664467,32666768,32672384,32678922,32702920,32733923,32736816,32758519,32777980,32782678,32787149,32817557,32821051	Gene ID= ENSG00000018699.11 TPM= 3.86 Transcript Type= NA
chr2	32628062	32821051	32628062	32821051	+	ENST00000317907.8@TTC27	ENST00000317907.8	protein_coding	32628062,32630523,32633876,32640270,32650131,32664303,32666635,32672272,32678856,32702807,32733828,32736694,32758292,32777882,32782626,32786984,32811024,32812504,32817457,32820816	32628380,32630700,32634005,32640410,32650233,32664467,32666768,32672384,32678922,32702920,32733923,32736816,32758519,32777980,32782678,32787149,32811221,32812615,32817557,32821051	Gene ID= ENSG00000018699.11 TPM= 18.34 Transcript Type= protein_coding
chr2	33458059	33563690	33458059	33563690	+	transcript1176.chr2.nic@RASGRP3	transcript1176.chr2.nic	protein_coding	33458059,33511710,33515010,33516542,33519952,33520553,33521955,33523879,33524432,33527137,33534323,33539094,33543512,33549604,33555531,33558211,33558672,33562729	33458130,33511842,33515206,33516644,33520014,33520684,33522102,33524052,33524548,33527412,33534400,33539210,33543627,33549751,33555567,33558336,33559030,33563690	Gene ID= ENSG00000152689.17 TPM= 1.93 Transcript Type= NA
chr2	33583658	33599362	33583658	33599362	-	ENST00000238823.12@FAM98A	ENST00000238823.12	protein_coding	33599169,33595489,33592080,33588335,33587240,33586562,33585530,33583658	33599362,33595637,33592214,33588519,33587320,33586678,33585697,33585444	Gene ID= ENSG00000119812.18 TPM= 13.51 Transcript Type= protein_coding
chr2	36353611	36355528	36353611	36355528	-	transcript1187.chr2.nnic@NA	transcript1187.chr2.nnic	NA	36353611	36355528	Gene ID= novel_gene_chr2_1188 TPM= 1.93 Transcript Type= NA
chr2	36354749	36355564	36354749	36355564	-	transcript1184.chr2.nnic@AC009414.2	transcript1184.chr2.nnic	lincRNA	36355088,36354749	36355564,36354981	Gene ID= ENSG00000260025.1 TPM= 4.83 Transcript Type= NA
chr2	36552258	36594569	36552258	36594569	-	transcript1197.chr2.nic@FEZ2	transcript1197.chr2.nic	protein_coding	36594414,36590903,36583353,36581290,36578597,36560785,36558438,36555683,36552258	36594569,36591011,36583469,36581431,36578865,36560865,36558513,36555748,36553179	Gene ID= ENSG00000171055.14 TPM= 13.65 Transcript Type= NA
chr2	36552258	36598191	36552258	36598191	-	ENST00000379245.8@FEZ2	ENST00000379245.8	protein_coding	36597877,36590903,36583353,36581290,36578597,36560785,36558438,36555683,36552258	36598191,36591011,36583469,36581431,36578865,36560865,36558513,36555748,36553179	Gene ID= ENSG00000171055.14 TPM= 3.27 Transcript Type= protein_coding
chr2	36552258	36594625	36552258	36594625	-	transcript1203.chr2.nic@FEZ2	transcript1203.chr2.nic	protein_coding	36594414,36590903,36583353,36581290,36578597,36558438,36555683,36552258	36594625,36591011,36583469,36581431,36578865,36558513,36555748,36553179	Gene ID= ENSG00000171055.14 TPM= 41.4 Transcript Type= NA
chr2	36552258	36594569	36552258	36594569	-	transcript1208.chr2.nic@FEZ2	transcript1208.chr2.nic	protein_coding	36594414,36590903,36583353,36581290,36578597,36555683,36552258	36594569,36591011,36583469,36581431,36578865,36555748,36553179	Gene ID= ENSG00000171055.14 TPM= 8.34 Transcript Type= NA
chr2	36552258	36594566	36552258	36594566	-	ENST00000413938.5@FEZ2	ENST00000413938.5	protein_coding	36594414,36590903,36583353,36581505,36581290,36578597,36558438,36555683,36552258	36594566,36591011,36583469,36581590,36581431,36578865,36558513,36555748,36553179	Gene ID= ENSG00000171055.14 TPM= 11.72 Transcript Type= nonsense_mediated_decay
chr2	36552294	36598142	36552294	36598142	-	ENST00000405912.7@FEZ2	ENST00000405912.7	protein_coding	36597877,36590903,36583353,36581290,36578597,36558438,36555683,36552294	36598142,36591011,36583469,36581431,36578865,36558513,36555748,36553179	Gene ID= ENSG00000171055.14 TPM= 21.33 Transcript Type= protein_coding
chr2	36696690	36814787	36696690	36814787	+	ENST00000379242.7@VIT	ENST00000379242.7	protein_coding	36696690,36716353,36729426,36743100,36754921,36758969,36767094,36773791,36775002,36781727,36783340,36787129,36801301,36805438,36808472,36814183	36696973,36716422,36729491,36743256,36755054,36759046,36767285,36773847,36775067,36781771,36783402,36787276,36801404,36805664,36808985,36814787	Gene ID= ENSG00000205221.12 TPM= 5.31 Transcript Type= protein_coding
chr2	36696690	36814792	36696690	36814792	+	ENST00000389975.7@VIT	ENST00000389975.7	protein_coding	36696690,36716353,36729426,36743100,36754921,36758969,36767094,36773791,36775002,36783340,36787129,36801301,36805438,36808472,36814183	36696973,36716422,36729491,36743256,36755054,36759046,36767285,36773847,36775067,36783402,36787276,36801404,36805664,36808985,36814792	Gene ID= ENSG00000205221.12 TPM= 4.34 Transcript Type= protein_coding
chr2	36696726	36698949	36696726	36698949	+	transcript1231.chr2.nnic@NA	transcript1231.chr2.nnic	NA	36696726	36698949	Gene ID= novel_gene_chr2_1232 TPM= 1.93 Transcript Type= NA
chr2	36846172	36966597	36846172	36966597	-	transcript1236.chr2.nic@STRN	transcript1236.chr2.nic	protein_coding	36966230,36925105,36916078,36905540,36902584,36899523,36893898,36883932,36877891,36869554,36867814,36861132,36857856,36855212,36851000,36849714,36846172	36966597,36925208,36916151,36905618,36902751,36899658,36894033,36884075,36878027,36869729,36867861,36861253,36858023,36855352,36851107,36849800,36849625	Gene ID= ENSG00000115808.11 TPM= 4.83 Transcript Type= NA
chr2	36886750	36966597	36886750	36966597	-	transcript1240.chr2.nic@STRN	transcript1240.chr2.nic	protein_coding	36966230,36925105,36916078,36905540,36902584,36899523,36893898,36886750	36966597,36925208,36916151,36905618,36902751,36899658,36894033,36886826	Gene ID= ENSG00000115808.11 TPM= 1.93 Transcript Type= NA
chr2	37084451	37099244	37084451	37099244	+	ENST00000409774.5@GPATCH11	ENST00000409774.5	protein_coding	37084451,37088369,37089640,37090681,37091916,37092165,37094082,37095437,37096208	37084570,37088440,37089866,37090722,37092036,37092255,37094195,37095518,37099244	Gene ID= ENSG00000152133.14 TPM= 5.79 Transcript Type= protein_coding
chr2	37084518	37099244	37084518	37099244	+	ENST00000281932.5@GPATCH11	ENST00000281932.5	protein_coding	37084518,37088369,37091916,37092165,37094082,37095437,37096208	37084570,37088440,37092036,37092255,37094195,37095518,37099244	Gene ID= ENSG00000152133.14 TPM= 1.93 Transcript Type= protein_coding
chr2	37107477	37157231	37107477	37157231	-	transcript1255.chr2.nic@EIF2AK2	transcript1255.chr2.nic	protein_coding	37156908,37148857,37147688,37146853,37141553,37139631,37138509,37138270,37136983,37135484,37126289,37122506,37119959,37114731,37109194,37107477	37157231,37149023,37147822,37146973,37141701,37139757,37138585,37138363,37137017,37135546,37126411,37122664,37120139,37114859,37109295,37107527	Gene ID= ENSG00000055332.16 TPM= 2.9 Transcript Type= NA
chr2	37196485	37204741	37196485	37204741	+	transcript1269.chr2.nnic@CEBPZOS	transcript1269.chr2.nnic	protein_coding	37196485,37199704,37201048,37201642,37201863,37202706	37196520,37199819,37201092,37201726,37202657,37204741	Gene ID= ENSG00000218739.9 TPM= 13.03 Transcript Type= NA
chr2	37196488	37204741	37196488	37204741	+	ENST00000402297.5@CEBPZOS	ENST00000402297.5	protein_coding	37196488,37199704,37201048,37201642,37201863	37196520,37199819,37201092,37201726,37204741	Gene ID= ENSG00000218739.9 TPM= 10.14 Transcript Type= protein_coding
chr2	37196508	37204739	37196508	37204739	+	ENST00000392061.6@CEBPZOS	ENST00000392061.6	protein_coding	37196508,37199704,37201048,37201642,37204304	37196520,37199819,37201092,37201726,37204739	Gene ID= ENSG00000218739.9 TPM= 11.58 Transcript Type= protein_coding
chr2	37201612	37231713	37201612	37231713	-	ENST00000234170.9@CEBPZ	ENST00000234170.9	protein_coding	37231412,37227544,37223170,37222380,37220385,37216984,37216316,37216140,37214886,37213864,37212335,37211843,37210999,37202950,37202784,37201612	37231713,37229036,37223401,37222563,37220473,37217037,37216418,37216208,37214952,37213961,37212392,37212039,37211082,37203008,37202865,37201903	Gene ID= ENSG00000115816.14 TPM= 60.81 Transcript Type= protein_coding
chr2	37231666	37249160	37231666	37249160	+	ENST00000002125.8@NDUFAF7	ENST00000002125.8	protein_coding	37231666,37232106,37236096,37237757,37241578,37242635,37243863,37246052,37247456,37248135	37231760,37232266,37236176,37237867,37241791,37242693,37243973,37246195,37247629,37249160	Gene ID= ENSG00000003509.15 TPM= 8.69 Transcript Type= protein_coding
chr2	37250505	37324778	37250505	37324778	-	transcript1287.chr2.nic@PRKD3	transcript1287.chr2.nic	protein_coding	37324681,37293133,37290868,37289356,37286177,37282542,37279746,37277866,37275767,37274421,37272380,37269615,37267430,37260223,37259583,37256662,37254204,37250505	37324778,37293271,37290999,37289513,37286369,37282619,37279929,37277989,37275844,37274697,37272432,37269687,37267536,37260384,37259681,37256929,37254289,37253350	Gene ID= ENSG00000115825.9 TPM= 2.9 Transcript Type= NA
chr2	37641882	37672535	37641882	37672535	-	ENST00000611976.1@CDC42EP3	ENST00000611976.1	protein_coding	37672353,37641882	37672535,37646822	Gene ID= ENSG00000163171.7 TPM= 5.79 Transcript Type= protein_coding
chr2	37644840	37672891	37644840	37672891	-	transcript1307.chr2.nnic@CDC42EP3	transcript1307.chr2.nnic	protein_coding	37672829,37644840	37672891,37646822	Gene ID= ENSG00000163171.7 TPM= 5.79 Transcript Type= NA
chr2	37671066	37672607	37671066	37672607	+	transcript1310.chr2.nnic@NA	transcript1310.chr2.nnic	NA	37671066	37672607	Gene ID= novel_gene_chr2_1311 TPM= 1.93 Transcript Type= NA
chr2	38342481	38377286	38342481	38377286	-	transcript1336.chr2.nic@ATL2	transcript1336.chr2.nic	protein_coding	38377143,38354067,38342481	38377286,38354177,38343512	Gene ID= ENSG00000119787.13 TPM= 3.86 Transcript Type= NA
chr2	38342484	38377290	38342484	38377290	-	transcript1337.chr2.nic@ATL2	transcript1337.chr2.nic	protein_coding	38377143,38342484	38377290,38343512	Gene ID= ENSG00000119787.13 TPM= 4.83 Transcript Type= NA
chr2	38294880	38377262	38294880	38377262	-	ENST00000378954.8@ATL2	ENST00000378954.8	protein_coding	38377143,38343268,38318885,38318535,38315284,38314608,38313151,38310309,38309379,38300272,38299256,38298144,38294880	38377262,38343512,38319019,38318639,38315334,38314664,38313243,38310447,38309506,38300328,38299327,38298575,38296113	Gene ID= ENSG00000119787.13 TPM= 15.44 Transcript Type= protein_coding
chr2	38561978	38602928	38561978	38602928	-	transcript1341.chr2.nic@HNRNPLL	transcript1341.chr2.nic	protein_coding	38602438,38591530,38585644,38583841,38582072,38581913,38577920,38577461,38573210,38569804,38569133,38568386,38568199,38561978	38602928,38591648,38585881,38583926,38582168,38581985,38578002,38577532,38573427,38569925,38569334,38568443,38568297,38564237	Gene ID= ENSG00000143889.15 TPM= 2.41 Transcript Type= NA
chr2	38561978	38602966	38561978	38602966	-	ENST00000449105.7@HNRNPLL	ENST00000449105.7	protein_coding	38602438,38591530,38585644,38583841,38582072,38581913,38577461,38573210,38569804,38569133,38568386,38568199,38561978	38602966,38591648,38585881,38583926,38582168,38581985,38577532,38573427,38569925,38569334,38568443,38568297,38564237	Gene ID= ENSG00000143889.15 TPM= 2.41 Transcript Type= protein_coding
chr2	38599599	38602971	38599599	38602971	-	transcript1360.chr2.nnic@NA	transcript1360.chr2.nnic	NA	38599599	38602971	Gene ID= novel_gene_chr2_1361 TPM= 2.9 Transcript Type= NA
chr2	38666073	38734403	38666073	38734403	+	transcript1364.chr2.nic@GALM	transcript1364.chr2.nic	protein_coding	38666073,38675912,38681280,38689813,38698366,38729556,38731735,38733488	38666351,38676066,38681486,38689894,38698436,38729697,38731909,38734403	Gene ID= ENSG00000143891.16 TPM= 1.93 Transcript Type= NA
chr2	38665910	38734768	38665910	38734768	+	ENST00000272252.9@GALM	ENST00000272252.9	protein_coding	38665910,38675912,38681280,38689813,38729556,38731735,38733488	38666351,38676066,38681486,38689894,38729697,38731909,38734768	Gene ID= ENSG00000143891.16 TPM= 6.76 Transcript Type= protein_coding
chr2	38743599	38751494	38743599	38751494	-	ENST00000313117.10@SRSF7	ENST00000313117.10	protein_coding	38751229,38750014,38749529,38748579,38748047,38746694,38746144,38743599	38751494,38750194,38749705,38748653,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 14 Transcript Type= protein_coding
chr2	38744893	38751360	38744893	38751360	-	transcript1367.chr2.nic@SRSF7	transcript1367.chr2.nic	protein_coding	38751229,38750014,38749529,38748579,38748047,38746694,38746144,38744893	38751360,38750194,38749705,38749346,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 2.9 Transcript Type= NA
chr2	38743599	38751494	38743599	38751494	-	ENST00000446327.6@SRSF7	ENST00000446327.6	protein_coding	38751229,38750014,38749529,38748579,38748047,38746694,38743599	38751494,38750194,38749705,38748653,38748157,38746747,38745187	Gene ID= ENSG00000115875.18 TPM= 5.31 Transcript Type= protein_coding
chr2	38744893	38751358	38744893	38751358	-	ENST00000409276.5@SRSF7	ENST00000409276.5	protein_coding	38751229,38750014,38749529,38748579,38748056,38746694,38746144,38744893	38751358,38750194,38749705,38748653,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 24.13 Transcript Type= protein_coding
chr2	38778185	38785000	38778185	38785000	+	ENST00000281950.7@GEMIN6	ENST00000281950.7	protein_coding	38778185,38778972,38781517	38778281,38779118,38785000	Gene ID= ENSG00000152147.10 TPM= 11.58 Transcript Type= protein_coding
chr2	38797729	38875908	38797729	38875908	-	ENST00000457308.5@DHX57	ENST00000457308.5	protein_coding	38875787,38868182,38863361,38862145,38860999,38858661,38856340,38855057,38854054,38848269,38847019,38843005,38837831,38828340,38826516,38825847,38822993,38819049,38818877,38815521,38813821,38806559,38802715,38797729	38875908,38868411,38863519,38862333,38861837,38858836,38856461,38855252,38854178,38848402,38847073,38843210,38837947,38828436,38826689,38826047,38823269,38819144,38818960,38815655,38813895,38806693,38802915,38798442	Gene ID= ENSG00000163214.20 TPM= 5.79 Transcript Type= protein_coding
chr2	38875962	38882709	38875962	38882709	+	ENST00000340556.10@MORN2	ENST00000340556.10	protein_coding	38875962,38880179,38880600,38881442,38882413	38876110,38880229,38880706,38881578,38882709	Gene ID= ENSG00000188010.12 TPM= 3.86 Transcript Type= protein_coding
chr2	38876011	38882647	38876011	38882647	+	ENST00000409665.5@MORN2	ENST00000409665.5	protein_coding	38876011,38880179,38880582,38881442,38882413	38876110,38880229,38880706,38881578,38882647	Gene ID= ENSG00000188010.12 TPM= 2.9 Transcript Type= protein_coding
chr2	38959287	38960342	38959287	38960342	-	ENST00000601251.2@AC019171.1	ENST00000601251.2	antisense_RNA	38959287	38960342	Gene ID= ENSG00000269210.2 TPM= 1.93 Transcript Type= antisense_RNA
chr2	39053928	39121049	39053928	39121049	-	transcript1395.chr2.nic@SOS1	transcript1395.chr2.nic	protein_coding	39120336,39067628,39058673,39056702,39053928	39121049,39067753,39058804,39056866,39054823	Gene ID= ENSG00000115904.12 TPM= 3.86 Transcript Type= NA
chr2	39249283	39437301	39249283	39437301	-	ENST00000341681.9@MAP4K3	ENST00000341681.9	protein_coding	39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249283	39437301,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254520,39251885,39250705	Gene ID= ENSG00000011566.14 TPM= 16.41 Transcript Type= protein_coding
chr2	39249266	39437312	39249266	39437312	-	ENST00000263881.7@MAP4K3	ENST00000263881.7	protein_coding	39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39307943,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249266	39437312,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39308005,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254520,39251885,39250705	Gene ID= ENSG00000011566.14 TPM= 1.93 Transcript Type= protein_coding
chr2	39437358	39600156	39437358	39600156	+	transcript1410.chr2.nnic@AC007388.1	transcript1410.chr2.nnic	antisense_RNA	39437358,39453839,39454297,39516414,39518583,39557982,39599366	39437535,39453931,39454365,39516541,39518710,39558046,39600156	Gene ID= ENSG00000231312.6 TPM= 1.93 Transcript Type= NA
chr2	39437423	39454726	39437423	39454726	+	transcript1422.chr2.nic@AC007388.1	transcript1422.chr2.nic	antisense_RNA	39437423,39453839,39454297	39437535,39453931,39454726	Gene ID= ENSG00000231312.6 TPM= 1.93 Transcript Type= NA
chr2	39480784	39485917	39480784	39485917	-	transcript1423.chr2.nnic@NA	transcript1423.chr2.nnic	NA	39480784	39485917	Gene ID= novel_gene_chr2_1424 TPM= 3.86 Transcript Type= NA
chr2	39736307	39779267	39736307	39779267	-	ENST00000378727.8@THUMPD2	ENST00000378727.8	protein_coding	39779114,39771505,39769710,39768424,39766057,39761331,39757248,39755889,39755295,39744370,39736307	39779267,39771640,39770119,39768501,39766109,39761418,39757368,39755960,39755409,39744478,39737059	Gene ID= ENSG00000138050.14 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr2	39736305	39779271	39736305	39779271	-	transcript1431.chr2.nic@THUMPD2	transcript1431.chr2.nic	protein_coding	39779114,39771515,39768901,39768424,39766057,39761331,39755889,39755295,39744370,39736305	39779271,39771640,39770119,39768501,39766109,39761418,39755960,39755409,39744478,39737059	Gene ID= ENSG00000138050.14 TPM= 2.9 Transcript Type= NA
chr2	39736305	39779267	39736305	39779267	-	ENST00000505747.5@THUMPD2	ENST00000505747.5	protein_coding	39779114,39771505,39769710,39768424,39766057,39761331,39755889,39755295,39744370,39736305	39779267,39771640,39770119,39768501,39766109,39761418,39755960,39755409,39744478,39737059	Gene ID= ENSG00000138050.14 TPM= 11.58 Transcript Type= protein_coding
chr2	42048020	42058528	42048020	42058528	+	ENST00000294964.5@PKDCC	ENST00000294964.5	protein_coding	42048020,42053239,42054036,42054941,42055286,42057221,42057603	42048838,42053361,42054307,42055020,42055393,42057394,42058528	Gene ID= ENSG00000162878.12 TPM= 179.55 Transcript Type= protein_coding
chr2	42048000	42058528	42048000	42058528	+	transcript1446.chr2.nic@PKDCC	transcript1446.chr2.nic	protein_coding	42048000,42053239,42054036,42054941,42057256,42057603	42048838,42053361,42054307,42055020,42057394,42058528	Gene ID= ENSG00000162878.12 TPM= 15.76 Transcript Type= NA
chr2	42048000	42058528	42048000	42058528	+	transcript1447.chr2.nic@PKDCC	transcript1447.chr2.nic	protein_coding	42048000,42053239,42054036,42055286,42057221,42057603	42048838,42053361,42055020,42055393,42057394,42058528	Gene ID= ENSG00000162878.12 TPM= 10.3 Transcript Type= NA
chr2	42048018	42058528	42048018	42058528	+	transcript1448.chr2.nnic@PKDCC	transcript1448.chr2.nnic	protein_coding	42048018,42054036,42054941,42055286,42057221,42057603	42048838,42054307,42055020,42055393,42057394,42058528	Gene ID= ENSG00000162878.12 TPM= 37.65 Transcript Type= NA
chr2	42335559	42361248	42335559	42361248	-	transcript1462.chr2.nnic@COX7A2L	transcript1462.chr2.nnic	protein_coding	42361090,42353212,42335559	42361248,42353343,42335745	Gene ID= ENSG00000115944.14 TPM= 2.9 Transcript Type= NA
chr2	42349338	42369010	42349338	42369010	-	ENST00000378669.5@COX7A2L	ENST00000378669.5	protein_coding	42368868,42361090,42353212,42349338	42369010,42361848,42353343,42351359	Gene ID= ENSG00000115944.14 TPM= 110.05 Transcript Type= protein_coding
chr2	42350507	42361216	42350507	42361216	-	ENST00000234301.2@COX7A2L	ENST00000234301.2	protein_coding	42361090,42353212,42350507	42361216,42353343,42351359	Gene ID= ENSG00000115944.14 TPM= 111.01 Transcript Type= protein_coding
chr2	42568517	42709544	42568517	42709544	+	ENST00000407270.7@MTA3	ENST00000407270.7	protein_coding	42568517,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704194,42707903,42708874	42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709544	Gene ID= ENSG00000057935.13 TPM= 9.97 Transcript Type= protein_coding
chr2	42568675	42709213	42568675	42709213	+	ENST00000454356.5@MTA3	ENST00000454356.5	protein_coding	42568675,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704197,42707911,42708874	42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709213	Gene ID= ENSG00000057935.13 TPM= 7.08 Transcript Type= nonsense_mediated_decay
chr2	42568675	42709544	42568675	42709544	+	ENST00000406911.5@MTA3	ENST00000406911.5	protein_coding	42568675,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704197,42707903,42708874	42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709544	Gene ID= ENSG00000057935.13 TPM= 2.25 Transcript Type= protein_coding
chr2	42767089	42792592	42767089	42792592	-	ENST00000294973.10@HAAO	ENST00000294973.10	protein_coding	42792457,42788529,42783784,42783314,42770493,42770143,42769713,42767860,42767595,42767089	42792592,42788607,42783867,42783420,42770582,42770186,42769858,42767928,42767677,42767515	Gene ID= ENSG00000162882.14 TPM= 1.93 Transcript Type= protein_coding
chr2	43222402	43226609	43222402	43226609	-	ENST00000282388.3@ZFP36L2	ENST00000282388.3	protein_coding	43226265,43222402	43226609,43225752	Gene ID= ENSG00000152518.7 TPM= 103.29 Transcript Type= protein_coding
chr2	43230836	43596046	43230836	43596046	-	ENST00000405975.6@THADA	ENST00000405975.6	protein_coding	43595931,43592317,43591952,43590824,43586854,43586702,43586401,43581741,43578513,43577022,43574336,43572814,43571707,43570388,43566698,43560234,43556345,43552204,43551789,43549210,43541159,43527879,43508648,43505622,43498833,43485234,43430213,43428100,43397971,43344122,43320446,43292834,43292104,43291696,43286908,43279765,43232713,43230836	43596046,43592416,43592046,43590954,43587002,43586734,43586449,43581928,43578607,43577242,43575027,43572992,43571862,43570510,43566821,43560385,43556555,43552339,43551925,43549368,43541316,43527988,43508780,43505735,43498955,43485325,43430302,43428231,43398139,43344237,43320540,43293213,43292222,43291768,43287061,43279896,43232882,43231343	Gene ID= ENSG00000115970.18 TPM= 2.9 Transcript Type= protein_coding
chr2	43637302	43711880	43637302	43711880	+	transcript1483.chr2.nic@PLEKHH2	transcript1483.chr2.nic	protein_coding	43637302,43644671,43678863,43692514,43694431,43695143,43697171,43699647,43703981,43706322,43707401,43709990,43710220,43710489	43637379,43644796,43678925,43692663,43694514,43695224,43697356,43700608,43704056,43706416,43707545,43710126,43710330,43711880	Gene ID= ENSG00000152527.13 TPM= 2.9 Transcript Type= NA
chr2	43774039	43810010	43774039	43810010	+	ENST00000260605.12@DYNC2LI1	ENST00000260605.12	protein_coding	43774039,43776782,43783520,43787181,43789633,43794457,43795890,43796718,43800841,43801639,43804642,43805154,43809705	43774146,43776899,43783554,43787250,43789721,43794643,43795958,43796795,43800917,43801709,43804739,43805246,43810010	Gene ID= ENSG00000138036.18 TPM= 11.58 Transcript Type= protein_coding
chr2	43886508	43996005	43886508	43996005	-	ENST00000260665.11@LRPPRC	ENST00000260665.11	protein_coding	43995799,43982238,43979826,43977155,43976994,43976143,43975091,43974614,43974150,43973795,43973607,43963588,43960541,43957385,43950573,43949602,43948412,43948122,43947731,43947257,43946113,43945332,43943687,43934754,43934190,43925893,43925067,43918256,43918025,43912432,43905692,43901320,43899466,43899219,43896634,43894545,43889734,43886508	43996005,43982434,43979948,43977276,43977052,43976229,43975217,43974758,43974295,43973900,43973714,43963706,43960634,43957451,43950600,43949659,43948518,43948199,43947775,43947370,43946243,43945417,43943894,43934878,43934296,43925961,43925157,43918398,43918133,43912558,43905780,43901524,43899605,43899334,43896708,43894629,43889876,43888656	Gene ID= ENSG00000138095.18 TPM= 32.34 Transcript Type= protein_coding
chr2	44168877	44231472	44168877	44231472	+	ENST00000282412.8@PPM1B	ENST00000282412.8	protein_coding	44168877,44201186,44209210,44217967,44218480,44230413	44169274,44202045,44209327,44218078,44218537,44231472	Gene ID= ENSG00000138032.20 TPM= 411.32 Transcript Type= protein_coding
chr2	44168877	44231471	44168877	44231471	+	ENST00000409432.7@PPM1B	ENST00000409432.7	protein_coding	44168877,44201186,44209210,44217967,44218480,44229993	44169274,44202045,44209327,44218078,44218537,44231471	Gene ID= ENSG00000138032.20 TPM= 3.06 Transcript Type= protein_coding
chr2	44318763	44361546	44318763	44361546	-	ENST00000409411.5@PREPL	ENST00000409411.5	protein_coding	44361380,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44318763	44361546,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 6.76 Transcript Type= protein_coding
chr2	44317611	44361862	44317611	44361862	-	ENST00000541738.5@PREPL	ENST00000541738.5	protein_coding	44361524,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44317611	44361862,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 3.86 Transcript Type= protein_coding
chr2	44361964	44772592	44361964	44772592	+	ENST00000378494.7@CAMKMT	ENST00000378494.7	protein_coding	44361964,44372716,44390241,44704283,44706287,44707399,44715287,44743622,44754055,44766430,44772036	44362145,44372888,44390305,44704343,44706341,44707462,44715353,44743696,44754118,44766561,44772592	Gene ID= ENSG00000143919.14 TPM= 2.9 Transcript Type= protein_coding
chr2	45005161	45009430	45005161	45009430	-	ENST00000303077.6@SIX2	ENST00000303077.6	protein_coding	45008551,45005161	45009430,45006485	Gene ID= ENSG00000170577.7 TPM= 81.09 Transcript Type= protein_coding
chr2	45013152	45014555	45013152	45014555	-	transcript1547.chr2.nnic@NA	transcript1547.chr2.nnic	NA	45013152	45014555	Gene ID= novel_gene_chr2_1548 TPM= 3.86 Transcript Type= NA
chr2	45168789	45175929	45168789	45175929	+	transcript1549.chr2.nnic@AC093833.1	transcript1549.chr2.nnic	lincRNA	45168789,45175140	45168935,45175929	Gene ID= ENSG00000231054.1 TPM= 1.93 Transcript Type= NA
chr2	46297402	46386703	46297402	46386703	+	ENST00000263734.4@EPAS1	ENST00000263734.4	protein_coding	46297402,46346873,46356151,46356724,46360638,46360885,46369827,46375690,46376539,46377894,46378657,46380227,46381596,46381975,46382425,46384509	46297937,46347063,46356302,46356808,46360756,46361090,46369933,46375837,46376753,46378087,46378767,46380717,46381722,46382089,46382598,46386703	Gene ID= ENSG00000116016.13 TPM= 31.86 Transcript Type= protein_coding
chr2	46511851	46542632	46511851	46542632	-	transcript1587.chr2.nnic@ATP6V1E2	transcript1587.chr2.nnic	protein_coding	46541390,46536611,46535813,46527941,46511851	46542632,46536703,46535927,46528047,46512812	Gene ID= ENSG00000250565.6 TPM= 3.86 Transcript Type= NA
chr2	46542716	46576597	46542716	46576597	+	transcript1590.chr2.nic@RHOQ	transcript1590.chr2.nic	protein_coding	46542716,46543754,46576087,46576561	46543188,46543812,46576251,46576597	Gene ID= ENSG00000119729.11 TPM= 7.24 Transcript Type= NA
chr2	46542728	46583121	46542728	46583121	+	ENST00000238738.8@RHOQ	ENST00000238738.8	protein_coding	46542728,46543754,46576087,46576561,46580928	46543188,46543812,46576251,46576656,46583121	Gene ID= ENSG00000119729.11 TPM= 104.09 Transcript Type= protein_coding
chr2	46543399	46544346	46543399	46544346	+	transcript1601.chr2.nnic@NA	transcript1601.chr2.nnic	NA	46543399	46544346	Gene ID= novel_gene_chr2_1602 TPM= 1.93 Transcript Type= NA
chr2	46580937	46617119	46580937	46617119	-	ENST00000281382.10@PIGF	ENST00000281382.10	protein_coding	46616970,46614937,46613694,46612228,46592475,46580937	46617119,46615185,46613785,46612344,46592583,46581591	Gene ID= ENSG00000151665.12 TPM= 6.76 Transcript Type= protein_coding
chr2	46617151	46625742	46617151	46625742	+	ENST00000238892.3@CRIPT	ENST00000238892.3	protein_coding	46617151,46618773,46619627,46623764,46624163	46617298,46618838,46619681,46623867,46625742	Gene ID= ENSG00000119878.5 TPM= 8.69 Transcript Type= protein_coding
chr2	46625377	46628256	46625377	46628256	-	transcript1612.chr2.nnic@NA	transcript1612.chr2.nnic	NA	46625377	46628256	Gene ID= novel_gene_chr2_1613 TPM= 17.38 Transcript Type= NA
chr2	46627652	46629925	46627652	46629925	+	transcript1610.chr2.nnic@NA	transcript1610.chr2.nnic	NA	46627652	46629925	Gene ID= novel_gene_chr2_1611 TPM= 2.9 Transcript Type= NA
chr2	46699201	46875320	46699201	46875320	+	transcript1617.chr2.nnic@SOCS5	transcript1617.chr2.nnic	protein_coding	46699201,46855923,46874843	46699449,46855990,46875320	Gene ID= ENSG00000171150.7 TPM= 1.93 Transcript Type= NA
chr2	46699187	46762313	46699187	46762313	+	ENST00000394861.2@SOCS5	ENST00000394861.2	protein_coding	46699187,46758519	46699449,46762313	Gene ID= ENSG00000171150.7 TPM= 3.86 Transcript Type= protein_coding
chr2	46901874	46915868	46901874	46915868	-	ENST00000319466.8@MCFD2	ENST00000319466.8	protein_coding	46915723,46909023,46907810,46901874	46915868,46909177,46907969,46905594	Gene ID= ENSG00000180398.11 TPM= 104.25 Transcript Type= protein_coding
chr2	46901874	46915816	46901874	46915816	-	ENST00000409913.5@MCFD2	ENST00000409913.5	protein_coding	46915723,46907810,46901874	46915816,46907969,46905594	Gene ID= ENSG00000180398.11 TPM= 68.54 Transcript Type= protein_coding
chr2	47160082	47176601	47160082	47176601	-	ENST00000272298.11@CALM2	ENST00000272298.11	protein_coding	47176441,47170734,47162519,47162286,47161723,47160082	47176601,47170764,47162662,47162392,47161858,47160804	Gene ID= ENSG00000143933.16 TPM= 129.35 Transcript Type= protein_coding
chr2	47175083	47176511	47175083	47176511	-	transcript1644.chr2.nnic@NA	transcript1644.chr2.nnic	NA	47175083	47176511	Gene ID= novel_gene_chr2_1645 TPM= 5.79 Transcript Type= NA
chr2	47335315	47335514	47335315	47335514	+	ENST00000418539.2@BCYRN1	ENST00000418539.2	scRNA	47335315	47335514	Gene ID= ENSG00000236824.2 TPM= 147.69 Transcript Type= scRNA
chr2	47402969	47483228	47402969	47483228	+	ENST00000233146.6@MSH2	ENST00000233146.6	protein_coding	47402969,47408401,47410094,47412414,47414269,47416296,47429742,47445548,47463031,47466658,47470965,47475025,47476367,47478272,47480696,47482779	47403402,47408555,47410372,47412560,47414418,47416429,47429941,47445657,47463154,47466808,47471062,47475270,47476571,47478519,47480871,47483228	Gene ID= ENSG00000095002.13 TPM= 6.76 Transcript Type= protein_coding
chr2	47783116	47806953	47783116	47806953	+	transcript1655.chr2.nic@MSH6	transcript1655.chr2.nic	protein_coding	47783116,47790927,47795894,47798611,47803420,47803630,47804910,47805618,47806204,47806347,47806452,47806779	47783493,47791123,47796063,47801155,47803628,47803685,47805027,47805707,47806345,47806358,47806651,47806953	Gene ID= ENSG00000116062.14 TPM= 6.27 Transcript Type= NA
chr2	47783082	47806952	47783082	47806952	+	ENST00000622629.4@MSH6	ENST00000622629.4	protein_coding	47783082,47790927,47795894,47798611,47803420,47803630,47804902,47805618,47806204,47806310,47806347,47806452,47806779	47783493,47791123,47796063,47801155,47803628,47803678,47805027,47805707,47806307,47806345,47806358,47806651,47806952	Gene ID= ENSG00000116062.14 TPM= 6.27 Transcript Type= protein_coding
chr2	47806920	47905793	47806920	47905793	-	ENST00000403359.7@FBXO11	ENST00000403359.7	protein_coding	47905489,47839642,47839419,47838859,47835872,47834788,47834579,47832964,47832769,47832572,47832349,47823143,47822218,47820362,47818956,47818779,47813791,47813234,47810316,47809600,47809158,47808329,47806920	47905793,47839769,47839500,47839003,47836001,47834871,47834711,47833070,47832880,47832678,47832486,47823360,47822303,47820456,47819078,47818864,47813867,47813377,47810426,47809707,47809266,47808427,47808247	Gene ID= ENSG00000138081.20 TPM= 10.62 Transcript Type= protein_coding
chr2	48314713	48375432	48314713	48375432	+	transcript1661.chr2.nic@FOXN2	transcript1661.chr2.nic	protein_coding	48314713,48346201,48359047,48362643,48373292,48374920	48314814,48346751,48359147,48362707,48373360,48375432	Gene ID= ENSG00000170802.15 TPM= 1.93 Transcript Type= NA
chr2	48440797	48515386	48440797	48515386	+	ENST00000294952.12@PPP1R21	ENST00000294952.12	protein_coding	48440797,48451008,48454595,48458126,48459754,48460095,48461138,48464937,48465493,48471087,48471279,48474683,48479924,48486631,48491018,48495679,48498493,48505564,48507269,48510015,48511340,48514715	48441010,48451076,48454741,48458227,48459918,48460153,48461232,48464989,48465642,48471188,48471367,48474819,48480016,48486758,48491170,48495771,48498735,48505596,48507385,48510113,48511468,48515386	Gene ID= ENSG00000162869.15 TPM= 1.93 Transcript Type= protein_coding
chr2	53767792	53775196	53767792	53775196	+	ENST00000295304.4@CHAC2	ENST00000295304.4	protein_coding	53767792,53771907,53774142	53768021,53771942,53775196	Gene ID= ENSG00000143942.4 TPM= 3.86 Transcript Type= protein_coding
chr2	53787027	53797795	53787027	53797795	+	transcript1683.chr2.nic@ERLEC1	transcript1683.chr2.nic	protein_coding	53787027,53794345,53795933,53797515,53797732	53787372,53794449,53796013,53797592,53797795	Gene ID= ENSG00000068912.13 TPM= 4.83 Transcript Type= NA
chr2	53787080	53818819	53787080	53818819	+	ENST00000185150.8@ERLEC1	ENST00000185150.8	protein_coding	53787080,53794345,53795933,53797515,53797732,53799047,53801397,53801713,53808299,53809214,53812949,53814543,53814860,53817898	53787372,53794449,53796013,53797592,53797795,53799081,53801620,53801842,53808460,53809273,53813073,53814620,53814935,53818819	Gene ID= ENSG00000068912.13 TPM= 62.75 Transcript Type= protein_coding
chr2	53787080	53818819	53787080	53818819	+	ENST00000378239.5@ERLEC1	ENST00000378239.5	protein_coding	53787080,53794345,53795933,53797515,53797732,53799047,53801397,53801713,53809214,53812949,53814543,53814860,53817898	53787372,53794449,53796013,53797592,53797795,53799081,53801620,53801842,53809273,53813073,53814620,53814935,53818819	Gene ID= ENSG00000068912.13 TPM= 9.65 Transcript Type= protein_coding
chr2	53864067	53970840	53864067	53970840	-	ENST00000404125.5@PSME4	ENST00000404125.5	protein_coding	53970543,53949143,53948421,53939956,53937391,53936764,53936087,53934605,53932668,53931835,53928117,53927394,53925959,53925539,53923321,53923049,53922517,53920889,53920193,53919151,53910075,53908784,53908510,53908320,53906806,53906598,53904025,53901350,53899881,53898301,53897870,53896804,53895583,53895007,53893674,53892808,53890104,53888721,53887858,53887259,53885690,53875627,53874339,53869376,53866747,53866085,53864067	53970840,53949283,53948537,53940000,53937540,53936827,53936161,53934727,53932760,53932100,53928303,53927483,53926023,53925689,53923419,53923118,53922584,53921104,53920350,53919246,53910130,53908840,53908565,53908418,53906868,53906693,53904156,53901559,53900017,53898354,53897999,53896885,53895736,53895076,53893799,53892960,53890208,53888812,53887989,53887467,53885775,53875755,53874494,53869538,53866880,53866223,53865573	Gene ID= ENSG00000068878.14 TPM= 19.31 Transcript Type= protein_coding
chr2	53971074	54305144	53971074	54305144	+	transcript1694.chr2.nnic@ACYP2	transcript1694.chr2.nnic	protein_coding	53971074,53973713,54135453,54138639,54304688	53971321,53973810,54135469,54138748,54305144	Gene ID= ENSG00000170634.12 TPM= 92.67 Transcript Type= NA
chr2	53971108	54066047	53971108	54066047	+	ENST00000422521.2@ACYP2	ENST00000422521.2	protein_coding	53971108,53973713,54050958,54057239,54065460	53971321,53973810,54051050,54057360,54066047	Gene ID= ENSG00000170634.12 TPM= 1.93 Transcript Type= protein_coding
chr2	53971088	53972616	53971088	53972616	+	transcript1708.chr2.nnic@NA	transcript1708.chr2.nnic	NA	53971088	53972616	Gene ID= novel_gene_chr2_1709 TPM= 1.93 Transcript Type= NA
chr2	54115276	54115916	54115276	54115916	-	transcript1710.chr2.nnic@NA	transcript1710.chr2.nnic	NA	54115276	54115916	Gene ID= novel_gene_chr2_1711 TPM= 4.83 Transcript Type= NA
chr2	54456274	54622330	54456274	54622330	+	transcript1722.chr2.nic@SPTBN1	transcript1722.chr2.nic	protein_coding	54456274,54526372,54599092,54612161,54616207,54617608,54618078,54621400,54622300	54456518,54526566,54599243,54612334,54616298,54617688,54618193,54621512,54622330	Gene ID= ENSG00000115306.15 TPM= 3.86 Transcript Type= NA
chr2	54662901	54669674	54662901	54669674	+	ENST00000467371.1@SPTBN1	ENST00000467371.1	protein_coding	54662901,54665915,54667604,54668351	54664691,54666088,54667646,54669674	Gene ID= ENSG00000115306.15 TPM= 4.83 Transcript Type= retained_intron
chr2	54456285	54669675	54456285	54669675	+	ENST00000356805.8@SPTBN1	ENST00000356805.8	protein_coding	54456285,54526372,54599092,54612161,54616207,54617608,54618078,54621400,54622300,54623479,54624804,54625932,54628097,54628933,54629892,54630855,54632566,54637713,54642983,54644323,54645229,54645928,54646194,54647131,54648986,54649615,54653609,54655070,54655914,54657850,54659154,54659936,54664453,54665915,54667604,54668351	54456518,54526566,54599243,54612334,54616298,54617688,54618193,54621512,54622487,54623596,54624962,54626234,54628250,54629803,54630029,54631611,54632768,54637803,54643129,54644586,54645453,54646017,54646475,54647261,54649190,54649989,54653853,54655208,54655998,54658046,54659266,54659999,54664691,54666088,54667646,54669675	Gene ID= ENSG00000115306.15 TPM= 22.2 Transcript Type= protein_coding
chr2	54966287	54972018	54966287	54972018	+	transcript1726.chr2.nnic@EML6	transcript1726.chr2.nnic	protein_coding	54966287,54967000,54968128,54968668,54970071	54966446,54967103,54968281,54968768,54972018	Gene ID= ENSG00000214595.11 TPM= 3.86 Transcript Type= NA
chr2	54972189	55050544	54972189	55050544	-	ENST00000337526.10@RTN4	ENST00000337526.10	protein_coding	55049745,55028164,55025086,54987491,54982515,54974695,54973821,54973563,54972189	55050544,55028220,55027485,54987698,54982653,54974764,54973867,54973621,54973198	Gene ID= ENSG00000115310.17 TPM= 14.8 Transcript Type= protein_coding
chr2	54972189	55050544	54972189	55050544	-	ENST00000357732.8@RTN4	ENST00000357732.8	protein_coding	55049745,55028164,54987491,54982515,54974695,54973821,54973563,54972189	55050544,55028220,54987698,54982653,54974764,54973867,54973621,54973198	Gene ID= ENSG00000115310.17 TPM= 6.27 Transcript Type= protein_coding
chr2	54972187	55010449	54972187	55010449	-	ENST00000394609.6@RTN4	ENST00000394609.6	protein_coding	55010087,54987491,54982515,54974695,54973821,54973563,54972187	55010449,54987698,54982653,54974764,54973867,54973621,54973198	Gene ID= ENSG00000115310.17 TPM= 109.73 Transcript Type= protein_coding
chr2	54972189	55050544	54972189	55050544	-	ENST00000317610.11@RTN4	ENST00000317610.11	protein_coding	55049745,54987491,54982515,54974695,54973821,54973563,54972189	55050544,54987698,54982653,54974764,54973867,54973621,54973198	Gene ID= ENSG00000115310.17 TPM= 13.03 Transcript Type= protein_coding
chr2	55232678	55235755	55232678	55235755	+	ENST00000404735.1@RPS27A	ENST00000404735.1	protein_coding	55232678,55233363,55234119,55234831,55235428	55232872,55233417,55234204,55234962,55235755	Gene ID= ENSG00000143947.13 TPM= 3.86 Transcript Type= protein_coding
chr2	55236621	55269266	55236621	55269266	-	transcript1740.chr2.nic@MTIF2	transcript1740.chr2.nic	protein_coding	55269169,55268578,55267569,55266381,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236621	55269266,55268739,55267635,55266518,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820	Gene ID= ENSG00000085760.14 TPM= 6.11 Transcript Type= NA
chr2	55236595	55269243	55236595	55269243	-	ENST00000403721.5@MTIF2	ENST00000403721.5	protein_coding	55269169,55267569,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236595	55269243,55267635,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820	Gene ID= ENSG00000085760.14 TPM= 1.77 Transcript Type= protein_coding
chr2	55237325	55269266	55237325	55269266	-	transcript1747.chr2.nic@MTIF2	transcript1747.chr2.nic	protein_coding	55269169,55268578,55267569,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237325	55269266,55268739,55267635,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428	Gene ID= ENSG00000085760.14 TPM= 1.93 Transcript Type= NA
chr2	55236620	55269248	55236620	55269248	-	ENST00000263629.8@MTIF2	ENST00000263629.8	protein_coding	55269169,55268578,55267569,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236620	55269248,55268739,55267635,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820	Gene ID= ENSG00000085760.14 TPM= 26.86 Transcript Type= protein_coding
chr2	55282319	55284472	55282319	55284472	+	ENST00000563365.1@PRORSD1P	ENST00000563365.1	transcribed_unitary_pseudogene	55282319	55284472	Gene ID= ENSG00000162997.15 TPM= 1.93 Transcript Type= processed_transcript
chr2	55334990	55419892	55334990	55419892	-	transcript1760.chr2.nic@CCDC88A	transcript1760.chr2.nic	protein_coding	55419017,55418816,55388778,55374814,55372452,55363950,55362308,55355579,55349518,55346175,55344368,55343648,55339464,55336681,55334990	55419892,55418916,55388886,55374883,55372510,55364033,55362448,55355751,55349599,55346333,55344514,55343792,55339648,55336818,55335164	Gene ID= ENSG00000115355.15 TPM= 4.83 Transcript Type= NA
chr2	55548378	55617647	55548378	55617647	-	transcript1772.chr2.nic@PPP4R3B	transcript1772.chr2.nic	protein_coding	55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55578247,55577315,55568194,55564902,55564313,55558775,55548378	55617647,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55578342,55577356,55568363,55565041,55564497,55558968,55550006	Gene ID= ENSG00000275052.4 TPM= 2.25 Transcript Type= NA
chr2	55548378	55617632	55548378	55617632	-	transcript1774.chr2.nnic@PPP4R3B	transcript1774.chr2.nnic	protein_coding	55617144,55615451,55603978,55588879,55586618,55585051,55581567,55579679,55577315,55568194,55564902,55564313,55558775,55548378	55617632,55615506,55604076,55588956,55586734,55585167,55581698,55579781,55577356,55568363,55565041,55564497,55558968,55550006	Gene ID= ENSG00000275052.4 TPM= 2.25 Transcript Type= NA
chr2	55613997	55617719	55613997	55617719	-	transcript1779.chr2.nnic@PPP4R3B	transcript1779.chr2.nnic	protein_coding	55617144,55615451,55613997	55617719,55615506,55615313	Gene ID= ENSG00000275052.4 TPM= 6.76 Transcript Type= NA
chr2	55613381	55617626	55613381	55617626	-	transcript1781.chr2.nic@PPP4R3B	transcript1781.chr2.nic	protein_coding	55617144,55613381	55617626,55615506	Gene ID= ENSG00000275052.4 TPM= 1.93 Transcript Type= NA
chr2	55613997	55617776	55613997	55617776	-	transcript1782.chr2.nic@PPP4R3B	transcript1782.chr2.nic	protein_coding	55617144,55613997	55617776,55615506	Gene ID= ENSG00000275052.4 TPM= 33.79 Transcript Type= NA
chr2	55614176	55618880	55614176	55618880	-	ENST00000612688.1@PPP4R3B	ENST00000612688.1	protein_coding	55618066,55617144,55614176	55618880,55617978,55615506	Gene ID= ENSG00000275052.4 TPM= 1.93 Transcript Type= processed_transcript
chr2	55548378	55617608	55548378	55617608	-	ENST00000616288.4@PPP4R3B	ENST00000616288.4	protein_coding	55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55577315,55573619,55568194,55564902,55564313,55558775,55548378	55617608,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55577356,55573777,55568363,55565041,55564497,55558968,55550006	Gene ID= ENSG00000275052.4 TPM= 2.25 Transcript Type= protein_coding
chr2	55548379	55617588	55548379	55617588	-	ENST00000616407.1@PPP4R3B	ENST00000616407.1	protein_coding	55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55578247,55577315,55573619,55568194,55564902,55564313,55558775,55548379	55617588,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55578342,55577356,55573777,55568363,55565041,55564497,55558968,55550006	Gene ID= ENSG00000275052.4 TPM= 2.9 Transcript Type= protein_coding
chr2	55634265	55693910	55634265	55693910	-	ENST00000447944.6@PNPT1	ENST00000447944.6	protein_coding	55693663,55687645,55686370,55684943,55683785,55680855,55680712,55679682,55672893,55671995,55671319,55667862,55666991,55661956,55660157,55656305,55656131,55654900,55647347,55646415,55646259,55645349,55644637,55643319,55643158,55640627,55637552,55634265	55693910,55687705,55686444,55685048,55683834,55680918,55680759,55679795,55673079,55672046,55671376,55667958,55667093,55662026,55660193,55656371,55656220,55654953,55647453,55646486,55646322,55645432,55644720,55643425,55643213,55640705,55637599,55636392	Gene ID= ENSG00000138035.14 TPM= 21.48 Transcript Type= protein_coding
chr2	55635993	55693867	55635993	55693867	-	transcript1798.chr2.nic@PNPT1	transcript1798.chr2.nic	protein_coding	55693663,55687645,55686370,55684943,55683785,55680855,55680712,55679682,55672893,55671995,55671319,55667862,55666991,55661956,55660157,55656305,55656131,55654900,55647347,55646415,55646259,55644637,55643319,55643158,55640627,55637552,55635993	55693867,55687705,55686444,55685048,55683834,55680918,55680759,55679795,55673079,55672046,55671376,55667958,55667093,55662026,55660193,55656371,55656220,55654953,55647453,55646486,55646322,55645432,55643425,55643213,55640705,55637599,55636392	Gene ID= ENSG00000138035.14 TPM= 4.1 Transcript Type= NA
chr2	55865967	55924139	55865967	55924139	-	ENST00000394555.6@EFEMP1	ENST00000394555.6	protein_coding	55923711,55922360,55918219,55917665,55881612,55877746,55876623,55874946,55871000,55870720,55865967	55924139,55922447,55918267,55918051,55881734,55877865,55876742,55875065,55871123,55870915,55867234	Gene ID= ENSG00000115380.19 TPM= 1.93 Transcript Type= protein_coding
chr2	56183904	56386171	56183904	56386171	+	transcript1814.chr2.nic@CCDC85A	transcript1814.chr2.nic	protein_coding	56183904,56192477,56342879,56384266	56184900,56193440,56342955,56386171	Gene ID= ENSG00000055813.5 TPM= 4.83 Transcript Type= NA
chr2	56184023	56386169	56184023	56386169	+	transcript1816.chr2.nnic@CCDC85A	transcript1816.chr2.nnic	protein_coding	56184023,56192477,56384266	56184900,56193440,56386169	Gene ID= ENSG00000055813.5 TPM= 3.86 Transcript Type= NA
chr2	58046799	58163095	58046799	58163095	+	transcript1819.chr2.nnic@VRK2	transcript1819.chr2.nnic	protein_coding	58046799,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58141731,58146316,58154754,58159349	58046868,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58141784,58146474,58154802,58163095	Gene ID= ENSG00000028116.16 TPM= 3.21 Transcript Type= NA
chr2	58046622	58163095	58046622	58163095	+	transcript1824.chr2.nic@VRK2	transcript1824.chr2.nic	protein_coding	58046622,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58154754,58159349	58046821,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58154802,58163095	Gene ID= ENSG00000028116.16 TPM= 1.93 Transcript Type= NA
chr2	58046691	58159871	58046691	58159871	+	transcript1827.chr2.nic@VRK2	transcript1827.chr2.nic	protein_coding	58046691,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58154754,58159349	58046868,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58154802,58159871	Gene ID= ENSG00000028116.16 TPM= 6.59 Transcript Type= NA
chr2	58046799	58133300	58046799	58133300	+	transcript1837.chr2.nic@VRK2	transcript1837.chr2.nic	protein_coding	58046799,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808	58046821,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58133300	Gene ID= ENSG00000028116.16 TPM= 1.93 Transcript Type= NA
chr2	58159247	58241350	58159247	58241350	-	ENST00000233741.8@FANCL	ENST00000233741.8	protein_coding	58241218,58232054,58229814,58226728,58221942,58204130,58198594,58165724,58163434,58163029,58162866,58161522,58160108,58159247	58241350,58232112,58229874,58226784,58222042,58204226,58198662,58165874,58163517,58163074,58162947,58161638,58160179,58159800	Gene ID= ENSG00000115392.11 TPM= 4.83 Transcript Type= protein_coding
chr2	60756230	60798963	60756230	60798963	+	ENST00000238714.7@PAPOLG	ENST00000238714.7	protein_coding	60756230,60760134,60761741,60768470,60768781,60770458,60771519,60775034,60779637,60780707,60781885,60782686,60783156,60786947,60787511,60791761,60792129,60793627,60793971,60794710,60794964,60797062	60756495,60760295,60761807,60768551,60768890,60770511,60771630,60775123,60779775,60780779,60782005,60782770,60783209,60787066,60787620,60791882,60792289,60793715,60794191,60794775,60795020,60798963	Gene ID= ENSG00000115421.12 TPM= 1.93 Transcript Type= protein_coding
chr2	60881620	60940021	60881620	60940021	+	transcript1851.chr2.nnic@REL	transcript1851.chr2.nnic	protein_coding	60881620,60891683,60894397,60900992,60916877,60918191,60918394,60920041,60920574,60921763,60937223	60881850,60891825,60894545,60901083,60917017,60918295,60918606,60920109,60920642,60921999,60940021	Gene ID= ENSG00000162924.13 TPM= 1.93 Transcript Type= NA
chr2	61017702	61051721	61017702	61051721	+	transcript1859.chr2.nnic@PEX13	transcript1859.chr2.nnic	protein_coding	61017702,61031419,61045726,61048472,61050906	61017851,61032113,61045851,61049493,61051721	Gene ID= ENSG00000162928.8 TPM= 1.93 Transcript Type= NA
chr2	61177420	61186913	61177420	61186913	+	transcript1872.chr2.nnic@AHSA2	transcript1872.chr2.nnic	protein_coding	61177420,61178981,61181320,61184712,61185502,61186446,61186617	61177789,61179171,61181405,61184800,61185618,61186497,61186913	Gene ID= ENSG00000173209.22 TPM= 1.93 Transcript Type= NA
chr2	61177420	61191210	61177420	61191210	+	transcript1874.chr2.nnic@AHSA2	transcript1874.chr2.nnic	protein_coding	61177420,61178981,61181320,61184712,61185502,61186446,61187909	61177789,61179171,61181405,61184800,61185618,61186497,61191210	Gene ID= ENSG00000173209.22 TPM= 6.76 Transcript Type= NA
chr2	61477934	61538375	61477934	61538375	-	transcript1889.chr2.nic@XPO1	transcript1889.chr2.nic	protein_coding	61537562,61534558,61533772,61526420,61522611,61502249,61501996,61499713,61498865,61498673,61496879,61495455,61493894,61492915,61492567,61492325,61492035,61490642,61488588,61488165,61485768,61483937,61482957,61482380,61481185,61477934	61538375,61534678,61533903,61526521,61522683,61502310,61502040,61499894,61498913,61498792,61497007,61495613,61494091,61493053,61492748,61492481,61492198,61490776,61488771,61488271,61485962,61484105,61483091,61482539,61481281,61478966	Gene ID= ENSG00000082898.16 TPM= 7.72 Transcript Type= NA
chr2	61477934	61538023	61477934	61538023	-	transcript1895.chr2.nnic@XPO1	transcript1895.chr2.nnic	protein_coding	61537562,61526420,61522611,61502249,61501996,61499713,61498865,61498673,61496879,61495455,61493894,61492915,61492567,61492325,61492035,61490642,61488588,61488165,61485768,61483937,61482957,61482380,61481185,61477934	61538023,61526521,61522683,61502310,61502040,61499894,61498913,61498792,61497007,61495613,61494091,61493053,61492748,61492481,61492198,61490776,61488771,61488271,61485962,61484105,61483091,61482539,61481281,61478966	Gene ID= ENSG00000082898.16 TPM= 4.83 Transcript Type= NA
chr2	61836057	61854531	61836057	61854531	-	transcript1900.chr2.nic@FAM161A	transcript1900.chr2.nic	protein_coding	61853859,61842122,61839421,61836057	61854531,61842360,61840581,61836109	Gene ID= ENSG00000170264.12 TPM= 2.9 Transcript Type= NA
chr2	61868089	61888804	61868089	61888804	-	ENST00000394440.7@CCT4	ENST00000394440.7	protein_coding	61888381,61885020,61883459,61880286,61878869,61877393,61876920,61876095,61873197,61873002,61872458,61872082,61869440,61868089	61888804,61885072,61883548,61880394,61879011,61877514,61877052,61876234,61873293,61873112,61872588,61872316,61869553,61868706	Gene ID= ENSG00000115484.14 TPM= 12.55 Transcript Type= protein_coding
chr2	61887938	61888640	61887938	61888640	-	transcript1917.chr2.nnic@NA	transcript1917.chr2.nnic	NA	61887938	61888640	Gene ID= novel_gene_chr2_1918 TPM= 5.79 Transcript Type= NA
chr2	61905647	62136247	61905647	62136247	+	ENST00000311832.5@COMMD1	ENST00000311832.5	protein_coding	61905647,62000701,62135831	61905858,62000982,62136247	Gene ID= ENSG00000173163.10 TPM= 19.31 Transcript Type= protein_coding
chr2	62196113	62224731	62196113	62224731	+	ENST00000301998.4@B3GNT2	ENST00000301998.4	protein_coding	62196113,62222212	62196355,62224731	Gene ID= ENSG00000170340.10 TPM= 10.62 Transcript Type= protein_coding
chr2	62505954	62506745	62505954	62506745	+	transcript1923.chr2.nnic@NA	transcript1923.chr2.nnic	NA	62505954	62506745	Gene ID= novel_gene_chr2_1924 TPM= 1.93 Transcript Type= NA
chr2	62705742	63046487	62705742	63046487	+	ENST00000431489.5@EHBP1	ENST00000431489.5	protein_coding	62705742,62706897,62747395,62764266,62771339,62826087,62831019,62859169,62864731,62874346,62942718,62943802,62948260,62955517,62979188,62990716,62993530,62993871,62996643,63037535,63038743,63045066,63045410	62706052,62707295,62747452,62764361,62771392,62826268,62831158,62859291,62864971,62874532,62942896,62943850,62949162,62955660,62979335,62990840,62993668,62993977,62996766,63037634,63038816,63045180,63046487	Gene ID= ENSG00000115504.14 TPM= 1.93 Transcript Type= protein_coding
chr2	63588609	63607197	63588609	63607197	+	ENST00000233114.12@MDH1	ENST00000233114.12	protein_coding	63588609,63594488,63595423,63597399,63599170,63604696,63605280,63605939,63606862	63589046,63594586,63595519,63597574,63599292,63604872,63605393,63606028,63607197	Gene ID= ENSG00000014641.17 TPM= 431.01 Transcript Type= protein_coding
chr2	63589151	63607194	63589151	63607194	+	ENST00000539945.5@MDH1	ENST00000539945.5	protein_coding	63589151,63594488,63595423,63597399,63599170,63604696,63605280,63605939,63606862	63589384,63594586,63595519,63597574,63599292,63604872,63605393,63606028,63607194	Gene ID= ENSG00000014641.17 TPM= 9.17 Transcript Type= protein_coding
chr2	63840921	63891561	63840921	63891561	+	transcript1953.chr2.nic@UGP2	transcript1953.chr2.nic	protein_coding	63840921,63856306,63857550,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120	63841232,63856433,63857718,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891561	Gene ID= ENSG00000169764.15 TPM= 17.41 Transcript Type= NA
chr2	63840940	63891562	63840940	63891562	+	ENST00000394417.6@UGP2	ENST00000394417.6	protein_coding	63840940,63856306,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120	63841232,63856433,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891562	Gene ID= ENSG00000169764.15 TPM= 264.51 Transcript Type= protein_coding
chr2	63841710	63891562	63841710	63891562	+	ENST00000337130.9@UGP2	ENST00000337130.9	protein_coding	63841710,63856306,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120	63842204,63856433,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891562	Gene ID= ENSG00000169764.15 TPM= 294.63 Transcript Type= protein_coding
chr2	64092652	64144454	64092652	64144454	-	ENST00000358912.4@PELI1	ENST00000358912.4	protein_coding	64144081,64108240,64104701,64100398,64096413,64096125,64092652	64144454,64108379,64104830,64100499,64096610,64096313,64095268	Gene ID= ENSG00000197329.11 TPM= 2.9 Transcript Type= protein_coding
chr2	64454092	64461381	64454092	64461381	+	ENST00000238875.9@LGALSL	ENST00000238875.9	protein_coding	64454092,64455344,64455589,64456288,64458285	64454581,64455415,64455677,64456465,64461381	Gene ID= ENSG00000119862.12 TPM= 11.58 Transcript Type= protein_coding
chr2	64524305	64592997	64524305	64592997	+	ENST00000238855.11@AFTPH	ENST00000238855.11	protein_coding	64524305,64551443,64567562,64569092,64569623,64572946,64579486,64581190,64585422,64591888	64524612,64553409,64567713,64569218,64569679,64573068,64579546,64581273,64585545,64592997	Gene ID= ENSG00000119844.15 TPM= 1.45 Transcript Type= protein_coding
chr2	64524305	64593005	64524305	64593005	+	ENST00000238856.8@AFTPH	ENST00000238856.8	protein_coding	64524305,64551443,64567562,64569092,64569623,64572946,64579486,64585422,64591885	64524612,64553409,64567713,64569218,64569679,64573068,64579546,64585545,64593005	Gene ID= ENSG00000119844.15 TPM= 9.17 Transcript Type= protein_coding
chr2	64631621	64653913	64631621	64653913	-	ENST00000313349.3@SERTAD2	ENST00000313349.3	protein_coding	64653620,64631621	64653913,64636875	Gene ID= ENSG00000179833.4 TPM= 3.86 Transcript Type= protein_coding
chr2	64988506	65022846	64988506	65022846	+	transcript2021.chr2.nnic@SLC1A4	transcript2021.chr2.nnic	protein_coding	64988506,64989598,65001448,65003953,65010597,65016440,65018071,65018545,65020912	64988620,64990170,65001490,65004015,65010763,65016673,65018265,65018679,65022846	Gene ID= ENSG00000115902.10 TPM= 3.86 Transcript Type= NA
chr2	64988449	65022846	64988449	65022846	+	transcript2022.chr2.nic@SLC1A4	transcript2022.chr2.nic	protein_coding	64988449,65001448,65003953,65010597,65016440,65018071,65018545,65020912	64988620,65001490,65004015,65010763,65016673,65018265,65018679,65022846	Gene ID= ENSG00000115902.10 TPM= 11.58 Transcript Type= NA
chr2	64989401	65023865	64989401	65023865	+	ENST00000234256.3@SLC1A4	ENST00000234256.3	protein_coding	64989401,65001448,65003953,65010597,65016440,65018071,65018545,65020912	64990170,65001490,65004015,65010763,65016673,65018265,65018679,65023865	Gene ID= ENSG00000115902.10 TPM= 12.55 Transcript Type= protein_coding
chr2	65056372	65087004	65056372	65087004	+	ENST00000377990.6@CEP68	ENST00000377990.6	protein_coding	65056372,65069399,65071454,65074282,65077868,65082536,65083639	65056528,65069801,65072980,65074404,65077964,65082709,65087004	Gene ID= ENSG00000011523.13 TPM= 26.86 Transcript Type= protein_coding
chr2	65056371	65084536	65056371	65084536	+	transcript2033.chr2.nnic@CEP68	transcript2033.chr2.nnic	protein_coding	65056371,65069399,65071454,65074282,65082536,65083639	65056528,65069801,65072980,65074404,65082709,65084536	Gene ID= ENSG00000011523.13 TPM= 3.21 Transcript Type= NA
chr2	65056416	65087004	65056416	65087004	+	transcript2035.chr2.nic@CEP68	transcript2035.chr2.nic	protein_coding	65056416,65071454,65074282,65077868,65082536,65083639	65056524,65072980,65074404,65077964,65082709,65087004	Gene ID= ENSG00000011523.13 TPM= 4.34 Transcript Type= NA
chr2	65056371	65074487	65056371	65074487	+	transcript2045.chr2.nic@CEP68	transcript2045.chr2.nic	protein_coding	65056371,65069399,65071454,65074282	65056528,65069801,65072980,65074487	Gene ID= ENSG00000011523.13 TPM= 6.11 Transcript Type= NA
chr2	65087871	65130127	65087871	65130127	-	transcript2043.chr2.nnic@RAB1A	transcript2043.chr2.nnic	protein_coding	65129893,65104734,65097971,65090983,65087871	65130127,65104806,65098066,65091078,65088690	Gene ID= ENSG00000138069.16 TPM= 5.79 Transcript Type= NA
chr2	65097791	65130127	65097791	65130127	-	transcript2053.chr2.nic@RAB1A	transcript2053.chr2.nic	protein_coding	65129893,65104734,65097791	65130127,65104806,65098066	Gene ID= ENSG00000138069.16 TPM= 2.9 Transcript Type= NA
chr2	65086855	65130106	65086855	65130106	-	ENST00000409784.7@RAB1A	ENST00000409784.7	protein_coding	65129893,65104734,65097971,65090983,65088939,65086855	65130106,65104806,65098066,65091078,65089070,65088690	Gene ID= ENSG00000138069.16 TPM= 19.62 Transcript Type= protein_coding
chr2	65087871	65130101	65087871	65130101	-	ENST00000398529.7@RAB1A	ENST00000398529.7	protein_coding	65129893,65104734,65097971,65087871	65130101,65104806,65098066,65088690	Gene ID= ENSG00000138069.16 TPM= 5.79 Transcript Type= protein_coding
chr2	65226616	65228045	65226616	65228045	-	transcript2063.chr2.nnic@NA	transcript2063.chr2.nnic	NA	65226616	65228045	Gene ID= novel_gene_chr2_2064 TPM= 1.93 Transcript Type= NA
chr2	65227753	65271253	65227753	65271253	+	ENST00000260641.9@ACTR2	ENST00000260641.9	protein_coding	65227753,65239852,65246524,65251027,65253728,65255545,65261247,65265043,65268564	65227957,65239962,65246739,65251099,65253864,65255694,65261392,65265175,65271253	Gene ID= ENSG00000138071.13 TPM= 2.9 Transcript Type= protein_coding
chr2	65269314	65270911	65269314	65270911	+	transcript2065.chr2.nnic@NA	transcript2065.chr2.nnic	NA	65269314	65270911	Gene ID= novel_gene_chr2_2066 TPM= 1.93 Transcript Type= NA
chr2	65301007	65302933	65301007	65302933	-	transcript2067.chr2.nnic@NA	transcript2067.chr2.nnic	NA	65301007	65302933	Gene ID= novel_gene_chr2_2068 TPM= 1.93 Transcript Type= NA
chr2	67397319	67410545	67397319	67410545	+	ENST00000272342.5@ETAA1	ENST00000272342.5	protein_coding	67397319,67399169,67399550,67402862,67403225,67409911	67397671,67399297,67399626,67402974,67405335,67410545	Gene ID= ENSG00000143971.7 TPM= 1.93 Transcript Type= protein_coding
chr2	68042209	68063021	68042209	68063021	-	transcript2074.chr2.nnic@C1D	transcript2074.chr2.nnic	protein_coding	68062945,68053061,68047173,68046344,68045988,68042209	68063021,68053137,68047319,68046410,68046043,68043053	Gene ID= ENSG00000197223.11 TPM= 10.62 Transcript Type= NA
chr2	68130635	68157539	68130635	68157539	-	transcript2082.chr2.nic@WDR92	transcript2082.chr2.nic	protein_coding	68157374,68147467,68144585,68141694,68138742,68137299,68134702,68130635	68157539,68147567,68144715,68141795,68138857,68137433,68134799,68131445	Gene ID= ENSG00000243667.6 TPM= 1.93 Transcript Type= NA
chr2	68157844	68176238	68157844	68176238	+	ENST00000263657.6@PNO1	ENST00000263657.6	protein_coding	68157844,68158380,68161683,68162265,68162546,68173347,68174735	68158141,68158529,68161766,68162325,68162663,68173417,68176238	Gene ID= ENSG00000115946.7 TPM= 14.48 Transcript Type= protein_coding
chr2	68293010	68320006	68293010	68320006	-	ENST00000263655.3@CNRIP1	ENST00000263655.3	protein_coding	68319222,68317157,68293010	68320006,68317307,68294026	Gene ID= ENSG00000119865.8 TPM= 3.86 Transcript Type= protein_coding
chr2	68365173	68397453	68365173	68397453	+	ENST00000234313.7@PLEK	ENST00000234313.7	protein_coding	68365173,68380328,68380723,68382542,68386502,68388387,68393162,68394107,68395680	68365393,68380483,68380904,68382633,68386686,68388491,68393245,68394176,68397453	Gene ID= ENSG00000115956.9 TPM= 4.83 Transcript Type= protein_coding
chr2	68466234	68467327	68466234	68467327	-	transcript2106.chr2.nnic@FBXO48	transcript2106.chr2.nnic	protein_coding	68467211,68466234	68467327,68466473	Gene ID= ENSG00000204923.3 TPM= 1.93 Transcript Type= NA
chr2	68467587	68578727	68467587	68578727	+	transcript2108.chr2.nnic@APLF	transcript2108.chr2.nnic	protein_coding	68467587,68490190,68502731,68513548,68526061,68537872,68545187,68567341,68577820	68467827,68490261,68502903,68513680,68526242,68538227,68545312,68567387,68578727	Gene ID= ENSG00000169621.9 TPM= 1.93 Transcript Type= NA
chr2	68774801	68826833	68774801	68826833	+	ENST00000409220.5@ARHGAP25	ENST00000409220.5	protein_coding	68774801,68782233,68787840,68807273,68813287,68816289,68817873,68819123,68822340,68825987	68775420,68782320,68787956,68807480,68813419,68816362,68817994,68819319,68822872,68826833	Gene ID= ENSG00000163219.11 TPM= 1.93 Transcript Type= protein_coding
chr2	69395750	69437628	69395750	69437628	-	ENST00000410022.6@NFU1	ENST00000410022.6	protein_coding	69437361,69431902,69423582,69419538,69415185,69406022,69400364,69395750	69437628,69432005,69423717,69419604,69415299,69406082,69400538,69396290	Gene ID= ENSG00000169599.12 TPM= 19.31 Transcript Type= protein_coding
chr2	69396123	69437435	69396123	69437435	-	transcript2114.chr2.nic@NFU1	transcript2114.chr2.nic	protein_coding	69437361,69431902,69419538,69415185,69406022,69400364,69396123	69437435,69432005,69419604,69415299,69406082,69400538,69396290	Gene ID= ENSG00000169599.12 TPM= 6.76 Transcript Type= NA
chr2	69643093	69643845	69643093	69643845	-	ENST00000492192.1@AAK1	ENST00000492192.1	protein_coding	69643575,69643093	69643845,69643274	Gene ID= ENSG00000115977.18 TPM= 12.55 Transcript Type= processed_transcript
chr2	69829642	69881396	69829642	69881396	+	ENST00000282570.3@GMCL1	ENST00000282570.3	protein_coding	69829642,69837547,69839457,69840942,69843149,69844131,69847543,69849652,69854823,69861278,69864900,69869719,69871745,69878909	69830152,69837670,69839553,69841039,69843261,69844196,69847627,69849742,69854960,69861347,69864975,69869864,69871832,69881396	Gene ID= ENSG00000087338.4 TPM= 2.9 Transcript Type= protein_coding
chr2	69893560	69905217	69893560	69905217	+	ENST00000244227.7@SNRNP27	ENST00000244227.7	protein_coding	69893560,69895094,69896436,69897377,69903181,69904254	69894018,69895214,69896548,69897456,69903245,69905217	Gene ID= ENSG00000124380.10 TPM= 31.37 Transcript Type= protein_coding
chr2	69893964	69904671	69893964	69904671	+	ENST00000450162.6@SNRNP27	ENST00000450162.6	protein_coding	69893964,69895094,69896436,69897377,69903181,69904254,69904512	69894018,69895214,69896548,69897456,69903245,69904425,69904671	Gene ID= ENSG00000124380.10 TPM= 7.24 Transcript Type= nonsense_mediated_decay
chr2	69906730	69909367	69906730	69909367	-	transcript2145.chr2.nnic@NA	transcript2145.chr2.nnic	NA	69906730	69909367	Gene ID= novel_gene_chr2_2146 TPM= 71.43 Transcript Type= NA
chr2	69908279	69913053	69908279	69913053	+	transcript2141.chr2.nnic@NA	transcript2141.chr2.nnic	NA	69908279	69913053	Gene ID= novel_gene_chr2_2142 TPM= 3.86 Transcript Type= NA
chr2	69915071	69942945	69915071	69942945	+	ENST00000264444.6@MXD1	ENST00000264444.6	protein_coding	69915071,69916121,69921736,69935351,69937235,69938097	69915403,69916220,69921765,69935465,69937394,69942945	Gene ID= ENSG00000059728.10 TPM= 5.79 Transcript Type= protein_coding
chr2	69915071	69923955	69915071	69923955	+	transcript2148.chr2.nnic@MXD1	transcript2148.chr2.nnic	protein_coding	69915071,69916121,69921736,69923807	69915403,69916220,69921765,69923955	Gene ID= ENSG00000059728.10 TPM= 1.93 Transcript Type= NA
chr2	70087454	70089203	70087454	70089203	+	ENST00000303577.6@PCBP1	ENST00000303577.6	protein_coding	70087454	70089203	Gene ID= ENSG00000169564.6 TPM= 1039.64 Transcript Type= protein_coding
chr2	70149880	70191071	70149880	70191071	-	ENST00000264434.6@C2orf42	ENST00000264434.6	protein_coding	70190973,70182667,70181163,70179532,70175673,70169557,70165528,70165092,70160625,70149880	70191071,70182935,70181997,70179642,70175777,70169661,70165635,70165192,70160787,70150564	Gene ID= ENSG00000115998.7 TPM= 3.86 Transcript Type= protein_coding
chr2	70210204	70248580	70210204	70248580	-	ENST00000282574.8@TIA1	ENST00000282574.8	protein_coding	70248405,70236079,70230756,70229264,70229059,70227735,70224554,70216886,70216404,70216208,70215371,70214349,70210204	70248580,70236175,70230854,70229318,70229091,70227822,70224629,70216994,70216499,70216292,70215494,70214491,70212845	Gene ID= ENSG00000116001.15 TPM= 2.9 Transcript Type= protein_coding
chr2	70258137	70281191	70258137	70281191	+	ENST00000433351.6@PCYOX1	ENST00000433351.6	protein_coding	70258137,70259360,70261212,70274959,70275514,70276734	70258276,70259566,70261386,70275170,70275666,70281191	Gene ID= ENSG00000116005.11 TPM= 4.83 Transcript Type= protein_coding
chr2	70281362	70293771	70281362	70293771	-	ENST00000272348.6@SNRPG	ENST00000272348.6	protein_coding	70293618,70289350,70288068,70281362	70293771,70289372,70288192,70281684	Gene ID= ENSG00000143977.13 TPM= 6.76 Transcript Type= protein_coding
chr2	70281367	70293740	70281367	70293740	-	ENST00000429728.1@SNRPG	ENST00000429728.1	protein_coding	70293618,70288068,70281367	70293740,70288192,70281684	Gene ID= ENSG00000143977.13 TPM= 8.69 Transcript Type= processed_transcript
chr2	70295975	70302090	70295975	70302090	-	ENST00000037869.7@FAM136A	ENST00000037869.7	protein_coding	70301925,70300840,70295975	70302090,70300980,70297477	Gene ID= ENSG00000035141.7 TPM= 25.1 Transcript Type= protein_coding
chr2	70985938	70994945	70985938	70994945	-	ENST00000272438.8@TEX261	ENST00000272438.8	protein_coding	70994688,70993696,70991830,70989749,70988915,70985938	70994945,70993775,70991983,70989816,70989017,70988715	Gene ID= ENSG00000144043.11 TPM= 71.43 Transcript Type= protein_coding
chr2	71068298	71078641	71068298	71078641	+	transcript2211.chr2.nic@NAGK	transcript2211.chr2.nic	protein_coding	71068298,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318	71068336,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078641	Gene ID= ENSG00000124357.12 TPM= 2.9 Transcript Type= NA
chr2	71068619	71078641	71068619	71078641	+	ENST00000443938.6@NAGK	ENST00000443938.6	protein_coding	71068619,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077570,71078318	71068712,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078641	Gene ID= ENSG00000124357.12 TPM= 16.41 Transcript Type= protein_coding
chr2	71068622	71078565	71068622	71078565	+	ENST00000244204.10@NAGK	ENST00000244204.10	protein_coding	71068622,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318	71068712,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078565	Gene ID= ENSG00000124357.12 TPM= 1.93 Transcript Type= protein_coding
chr2	71067518	71068557	71067518	71068557	-	transcript2214.chr2.nnic@NA	transcript2214.chr2.nnic	NA	71067518	71068557	Gene ID= novel_gene_chr2_2215 TPM= 2.9 Transcript Type= NA
chr2	71109814	71130281	71109814	71130281	-	transcript2218.chr2.nnic@MCEE	transcript2218.chr2.nnic	protein_coding	71130180,71124206,71110763,71109814	71130281,71124543,71110858,71110122	Gene ID= ENSG00000124370.10 TPM= 1.93 Transcript Type= NA
chr2	71109684	71130251	71109684	71130251	-	transcript2219.chr2.nic@MCEE	transcript2219.chr2.nic	protein_coding	71129717,71124206,71109684	71130251,71124543,71110122	Gene ID= ENSG00000124370.10 TPM= 2.9 Transcript Type= NA
chr2	71109684	71130237	71109684	71130237	-	ENST00000244217.5@MCEE	ENST00000244217.5	protein_coding	71130180,71124206,71109684	71130237,71124543,71110122	Gene ID= ENSG00000124370.10 TPM= 4.83 Transcript Type= protein_coding
chr2	71130314	71150101	71130314	71150101	+	ENST00000244230.6@MPHOSPH10	ENST00000244230.6	protein_coding	71130314,71132898,71133948,71134626,71138490,71139795,71141232,71144428,71147999,71149223,71149866	71130754,71133576,71134105,71134797,71138631,71139862,71141369,71144538,71148106,71149453,71150101	Gene ID= ENSG00000124383.8 TPM= 50.2 Transcript Type= protein_coding
chr2	71130632	71139425	71130632	71139425	+	ENST00000498451.2@MPHOSPH10	ENST00000498451.2	protein_coding	71130632,71132898,71133948,71134626,71138490	71130754,71133576,71134105,71134797,71139425	Gene ID= ENSG00000124383.8 TPM= 2.9 Transcript Type= protein_coding
chr2	71331764	71435061	71331764	71435061	+	ENST00000264447.8@ZNF638	ENST00000264447.8	protein_coding	71331764,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742	71331875,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435061	Gene ID= ENSG00000075292.18 TPM= 4.34 Transcript Type= protein_coding
chr2	71331762	71435058	71331762	71435058	+	transcript2236.chr2.nic@ZNF638	transcript2236.chr2.nic	protein_coding	71331762,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742	71331865,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435058	Gene ID= ENSG00000075292.18 TPM= 3.06 Transcript Type= NA
chr2	71331783	71435058	71331783	71435058	+	transcript2239.chr2.nnic@ZNF638	transcript2239.chr2.nnic	protein_coding	71331783,71355719,71363153,71365429,71367304,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742	71331875,71355780,71363191,71365706,71367398,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435058	Gene ID= ENSG00000075292.18 TPM= 3.06 Transcript Type= NA
chr2	71276593	71395670	71276593	71395670	+	ENST00000410075.5@ZNF638	ENST00000410075.5	protein_coding	71276593,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71388623,71393394,71395247	71276754,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71388723,71393645,71395670	Gene ID= ENSG00000075292.18 TPM= 4.83 Transcript Type= protein_coding
chr2	71331782	71388581	71331782	71388581	+	transcript2250.chr2.nnic@ZNF638	transcript2250.chr2.nnic	protein_coding	71331782,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71388413	71331865,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71388581	Gene ID= ENSG00000075292.18 TPM= 1.93 Transcript Type= NA
chr2	71331764	71352509	71331764	71352509	+	transcript2258.chr2.nic@ZNF638	transcript2258.chr2.nic	protein_coding	71331764,71348753	71331875,71352509	Gene ID= ENSG00000075292.18 TPM= 1.93 Transcript Type= NA
chr2	71453096	71454448	71453096	71454448	-	transcript2270.chr2.nnic@NA	transcript2270.chr2.nnic	NA	71454369,71453096	71454448,71454266	Gene ID= novel_gene_chr2_2271 TPM= 13.51 Transcript Type= NA
chr2	71453722	71686768	71453722	71686768	+	ENST00000258104.7@DYSF	ENST00000258104.7	protein_coding	71453722,71480883,71481879,71503214,71511807,71513716,71515623,71516180,71516989,71520178,71520789,71526220,71528298,71535021,71535268,71539157,71549350,71551041,71551607,71553011,71553807,71555965,71561752,71564058,71567951,71568172,71569820,71570229,71570599,71574198,71589593,71590211,71598564,71600702,71601499,71602776,71611245,71611465,71612641,71613334,71643965,71656162,71658878,71660560,71664268,71665162,71667376,71668754,71669112,71669605,71674197,71679057,71681001,71682530,71686454	71454086,71480938,71481970,71503319,71511921,71513921,71515751,71516242,71517039,71520208,71520904,71526346,71528401,71535089,71535311,71539239,71549391,71551156,71551720,71553188,71553931,71556071,71561944,71564213,71568082,71568338,71569934,71570334,71570741,71574371,71589686,71590288,71598745,71600842,71601528,71602805,71611346,71611626,71612806,71613410,71644063,71656290,71659033,71660651,71664438,71665304,71667515,71668842,71669207,71669746,71674296,71679235,71681110,71682677,71686768	Gene ID= ENSG00000135636.13 TPM= 93.64 Transcript Type= protein_coding
chr2	72129238	72148038	72129238	72148038	-	ENST00000001146.6@CYP26B1	ENST00000001146.6	protein_coding	72147631,72143989,72135144,72134761,72133023,72129238	72148038,72144213,72135419,72134916,72133307,72132619	Gene ID= ENSG00000003137.8 TPM= 2.9 Transcript Type= protein_coding
chr2	72887404	72892158	72887404	72892158	+	transcript2283.chr2.nic@SPR	transcript2283.chr2.nic	protein_coding	72887404,72891347	72888604,72892158	Gene ID= ENSG00000116096.5 TPM= 6.76 Transcript Type= NA
chr2	72887360	72892158	72887360	72892158	+	ENST00000234454.5@SPR	ENST00000234454.5	protein_coding	72887360,72888314,72891347	72887736,72888604,72892158	Gene ID= ENSG00000116096.5 TPM= 65.64 Transcript Type= protein_coding
chr2	72942036	73071836	72942036	73071836	-	ENST00000272433.6@SFXN5	ENST00000272433.6	protein_coding	73071604,73058528,73040854,73023188,73022522,73020239,73001525,73000431,72998949,72988258,72971570,72968448,72961131,72942036	73071836,73058596,73040931,73023214,73022576,73020264,73001578,73000487,72999014,72988348,72971685,72968533,72961248,72945099	Gene ID= ENSG00000144040.12 TPM= 10.62 Transcript Type= protein_coding
chr2	73073382	73113018	73073382	73113018	-	ENST00000258098.6@RAB11FIP5	ENST00000258098.6	protein_coding	73112347,73088879,73088050,73075993,73073382	73113018,73089315,73088749,73076182,73075724	Gene ID= ENSG00000135631.16 TPM= 51.16 Transcript Type= protein_coding
chr2	73073382	73112783	73073382	73112783	-	ENST00000486777.6@RAB11FIP5	ENST00000486777.6	protein_coding	73112347,73088879,73088050,73079651,73075993,73073382	73112783,73089315,73088749,73081663,73076182,73075724	Gene ID= ENSG00000135631.16 TPM= 14.48 Transcript Type= protein_coding
chr2	73113018	73113630	73113018	73113630	+	ENST00000608612.1@AC010913.1	ENST00000608612.1	processed_transcript	73113018,73113400	73113206,73113630	Gene ID= ENSG00000272702.1 TPM= 1.93 Transcript Type= antisense_RNA
chr2	73214222	73227237	73214222	73227237	+	ENST00000389501.8@SMYD5	ENST00000389501.8	protein_coding	73214222,73218861,73220051,73220661,73221165,73221826,73222755,73223036,73223426,73223947,73224866,73225631,73225796	73214362,73218969,73220190,73220782,73221234,73221930,73222817,73223106,73223532,73224003,73224960,73225701,73227237	Gene ID= ENSG00000135632.11 TPM= 26.06 Transcript Type= protein_coding
chr2	73228010	73233304	73228010	73233304	-	transcript2317.chr2.nic@PRADC1	transcript2317.chr2.nic	protein_coding	73233094,73230113,73229461,73228010	73233304,73230213,73229570,73228962	Gene ID= ENSG00000135617.3 TPM= 3.86 Transcript Type= NA
chr2	73228006	73233228	73228006	73233228	-	ENST00000258083.2@PRADC1	ENST00000258083.2	protein_coding	73233094,73230113,73229461,73228795,73228006	73233228,73230213,73229570,73228962,73228574	Gene ID= ENSG00000135617.3 TPM= 134.18 Transcript Type= protein_coding
chr2	73234236	73253021	73234236	73253021	+	ENST00000539919.5@CCT7	ENST00000539919.5	protein_coding	73234236,73235550,73239643,73240437,73243004,73243997,73244544,73247762,73248991,73249819,73250306,73251226,73252640	73234384,73235645,73239796,73240543,73243129,73244049,73244715,73247926,73249179,73249916,73250438,73251432,73253021	Gene ID= ENSG00000135624.15 TPM= 23.65 Transcript Type= protein_coding
chr2	73234238	73253004	73234238	73253004	+	ENST00000258091.9@CCT7	ENST00000258091.9	protein_coding	73234238,73239643,73240437,73243004,73243997,73244544,73247762,73248991,73249819,73250306,73251226,73252640	73234384,73239796,73240543,73243129,73244049,73244715,73247926,73249179,73249916,73250438,73251432,73253004	Gene ID= ENSG00000135624.15 TPM= 381.78 Transcript Type= protein_coding
chr2	73234308	73253004	73234308	73253004	+	ENST00000398422.2@CCT7	ENST00000398422.2	protein_coding	73234308,73247762,73248991,73249819,73250306,73251226,73252640	73234384,73247926,73249179,73249916,73250438,73251432,73253004	Gene ID= ENSG00000135624.15 TPM= 11.58 Transcript Type= protein_coding
chr2	73729890	73737400	73729890	73737400	-	ENST00000318190.7@TPRKB	ENST00000318190.7	protein_coding	73737302,73734429,73732584,73732163,73730560,73729890	73737400,73734591,73732700,73732285,73730736,73730029	Gene ID= ENSG00000144034.14 TPM= 16.25 Transcript Type= protein_coding
chr2	73729830	73737386	73729830	73737386	-	ENST00000272424.9@TPRKB	ENST00000272424.9	protein_coding	73737302,73734429,73732163,73730560,73729830	73737386,73734591,73732285,73730736,73730029	Gene ID= ENSG00000144034.14 TPM= 37.97 Transcript Type= protein_coding
chr2	73729890	73737400	73729890	73737400	-	ENST00000409716.6@TPRKB	ENST00000409716.6	protein_coding	73737302,73734429,73732584,73732163,73730560,73729890	73737400,73734588,73732700,73732285,73730736,73730029	Gene ID= ENSG00000144034.14 TPM= 7.56 Transcript Type= protein_coding
chr2	73762184	73780157	73762184	73780157	-	ENST00000272444.7@DUSP11	ENST00000272444.7	protein_coding	73779874,73778301,73774913,73773800,73769265,73767161,73766828,73766418,73762184	73780157,73778376,73775044,73773923,73769325,73767207,73766903,73766594,73762859	Gene ID= ENSG00000144048.10 TPM= 6.76 Transcript Type= protein_coding
chr2	73828976	73873659	73828976	73873659	+	transcript2332.chr2.nic@STAMBP	transcript2332.chr2.nic	protein_coding	73828976,73829405,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203,73870143,73873352	73829070,73829510,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73862304,73870352,73873659	Gene ID= ENSG00000124356.15 TPM= 2.9 Transcript Type= NA
chr2	73828942	73862881	73828942	73862881	+	transcript2338.chr2.nic@STAMBP	transcript2338.chr2.nic	protein_coding	73828942,73829405,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73828996,73829510,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73862881	Gene ID= ENSG00000124356.15 TPM= 6.95 Transcript Type= NA
chr2	73828916	73867168	73828916	73867168	+	ENST00000339566.7@STAMBP	ENST00000339566.7	protein_coding	73828916,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73828996,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73867168	Gene ID= ENSG00000124356.15 TPM= 41.51 Transcript Type= protein_coding
chr2	73828990	73862881	73828990	73862881	+	transcript2346.chr2.nic@STAMBP	transcript2346.chr2.nic	protein_coding	73828990,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73829070,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73862881	Gene ID= ENSG00000124356.15 TPM= 3.09 Transcript Type= NA
chr2	73828958	73862881	73828958	73862881	+	transcript2347.chr2.nnic@STAMBP	transcript2347.chr2.nnic	protein_coding	73828958,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73828996,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73862881	Gene ID= ENSG00000124356.15 TPM= 3.09 Transcript Type= NA
chr2	73892979	73919865	73892979	73919865	+	ENST00000345517.7@ACTG2	ENST00000345517.7	protein_coding	73892979,73901276,73902360,73908673,73909055,73913485,73914680,73916584,73919432	73893051,73901437,73902488,73908783,73909139,73913646,73914871,73916765,73919865	Gene ID= ENSG00000163017.13 TPM= 1.93 Transcript Type= protein_coding
chr2	73926826	73958961	73926826	73958961	+	ENST00000264093.8@DGUOK	ENST00000264093.8	protein_coding	73926826,73938910,73946719,73950585,73957125,73958146,73958710	73927052,73939022,73946906,73950732,73957240,73958245,73958961	Gene ID= ENSG00000114956.19 TPM= 16.41 Transcript Type= protein_coding
chr2	73926881	73958946	73926881	73958946	+	transcript2359.chr2.nnic@DGUOK	transcript2359.chr2.nnic	protein_coding	73926881,73946719,73950585,73957125,73958146,73958710	73927052,73946888,73950732,73957240,73958245,73958946	Gene ID= ENSG00000114956.19 TPM= 2.9 Transcript Type= NA
chr2	73926865	73958946	73926865	73958946	+	transcript2361.chr2.nic@DGUOK	transcript2361.chr2.nic	protein_coding	73926865,73938910,73946719,73950585,73958146,73958710	73927052,73939022,73946906,73950732,73958245,73958946	Gene ID= ENSG00000114956.19 TPM= 2.9 Transcript Type= NA
chr2	73926826	73958959	73926826	73958959	+	ENST00000629438.2@DGUOK	ENST00000629438.2	protein_coding	73926826,73946719,73950585,73957125,73958146,73958710	73927052,73946906,73950732,73957240,73958245,73958959	Gene ID= ENSG00000114956.19 TPM= 17.38 Transcript Type= protein_coding
chr2	73926875	73958946	73926875	73958946	+	ENST00000418996.5@DGUOK	ENST00000418996.5	protein_coding	73926875,73946719,73958146,73958710	73927052,73946906,73958245,73958946	Gene ID= ENSG00000114956.19 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr2	74135401	74147905	74135401	74147905	-	transcript2372.chr2.nnic@BOLA3	transcript2372.chr2.nnic	protein_coding	74147821,74146242,74145189,74142272,74135401	74147905,74147231,74145303,74142360,74135658	Gene ID= ENSG00000163170.11 TPM= 6.76 Transcript Type= NA
chr2	74135398	74147994	74135398	74147994	-	ENST00000327428.9@BOLA3	ENST00000327428.9	protein_coding	74147821,74145189,74142272,74135398	74147994,74145303,74142360,74135658	Gene ID= ENSG00000163170.11 TPM= 32.82 Transcript Type= protein_coding
chr2	74135415	74147912	74135415	74147912	-	ENST00000469676.1@BOLA3	ENST00000469676.1	protein_coding	74147821,74146242,74145189,74135415	74147912,74147226,74145303,74135658	Gene ID= ENSG00000163170.11 TPM= 2.41 Transcript Type= processed_transcript
chr2	74135415	74147905	74135415	74147905	-	ENST00000295326.4@BOLA3	ENST00000295326.4	protein_coding	74147821,74145189,74135415	74147905,74145303,74135658	Gene ID= ENSG00000163170.11 TPM= 37.16 Transcript Type= protein_coding
chr2	74198562	74217565	74198562	74217565	+	ENST00000394053.6@MTHFD2	ENST00000394053.6	protein_coding	74198562,74205705,74207704,74208569,74209942,74211199,74211741,74214079	74198742,74205889,74207826,74208721,74210049,74211291,74211866,74217565	Gene ID= ENSG00000065911.11 TPM= 5.79 Transcript Type= protein_coding
chr2	74198604	74215298	74198604	74215298	+	transcript2400.chr2.nnic@MTHFD2	transcript2400.chr2.nnic	protein_coding	74198604,74201382,74207704,74208569,74209942,74211199,74211741,74214079	74198742,74201479,74207826,74208721,74210049,74211291,74211866,74215298	Gene ID= ENSG00000065911.11 TPM= 7.08 Transcript Type= NA
chr2	74361158	74392065	74361158	74392065	-	transcript2410.chr2.nnic@DCTN1	transcript2410.chr2.nnic	protein_coding	74391794,74378000,74377648,74377432,74372928,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361158	74392065,74378245,74377726,74377466,74372948,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 165.39 Transcript Type= NA
chr2	74361157	74392087	74361157	74392087	-	ENST00000409240.5@DCTN1	ENST00000409240.5	protein_coding	74391794,74378000,74377648,74377432,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361157	74392087,74378245,74377726,74377466,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 58.24 Transcript Type= protein_coding
chr2	74361158	74391865	74361158	74391865	-	ENST00000409868.5@DCTN1	ENST00000409868.5	protein_coding	74391794,74378000,74377648,74377432,74376742,74374323,74372928,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361158	74391865,74378245,74377726,74377466,74376762,74374340,74372948,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 23.49 Transcript Type= protein_coding
chr2	74421730	74425755	74421730	74425755	+	ENST00000348227.4@WDR54	ENST00000348227.4	protein_coding	74421730,74422153,74422870,74423319,74423478,74423855,74424875,74425075,74425417,74425570	74421816,74422375,74422932,74423385,74423531,74423982,74424975,74425237,74425491,74425755	Gene ID= ENSG00000005448.16 TPM= 1.93 Transcript Type= protein_coding
chr2	74425859	74440578	74425859	74440578	-	transcript2431.chr2.nic@RTKN	transcript2431.chr2.nic	protein_coding	74440353,74439551,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425859	74440578,74439977,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426759	Gene ID= ENSG00000114993.16 TPM= 2.17 Transcript Type= NA
chr2	74425836	74440583	74425836	74440583	-	ENST00000305557.9@RTKN	ENST00000305557.9	protein_coding	74440353,74439551,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425836	74440583,74439977,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426574	Gene ID= ENSG00000114993.16 TPM= 1.21 Transcript Type= protein_coding
chr2	74425859	74440559	74425859	74440559	-	transcript2433.chr2.nic@RTKN	transcript2433.chr2.nic	protein_coding	74440353,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425859	74440559,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426759	Gene ID= ENSG00000114993.16 TPM= 4.1 Transcript Type= NA
chr2	74425876	74441899	74425876	74441899	-	ENST00000272430.9@RTKN	ENST00000272430.9	protein_coding	74441706,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425876	74441899,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426574	Gene ID= ENSG00000114993.16 TPM= 2.17 Transcript Type= protein_coding
chr2	74455023	74457960	74455023	74457960	+	ENST00000233331.11@INO80B	ENST00000233331.11	protein_coding	74455023,74455406,74455818,74456103,74457334	74455174,74455598,74455936,74456272,74457960	Gene ID= ENSG00000115274.14 TPM= 22.2 Transcript Type= protein_coding
chr2	74458400	74460891	74458400	74460891	+	ENST00000393972.7@WBP1	ENST00000393972.7	protein_coding	74458400,74458997,74459643,74459873,74460221	74458671,74459098,74459745,74460049,74460891	Gene ID= ENSG00000239779.6 TPM= 4.34 Transcript Type= protein_coding
chr2	74458329	74460891	74458329	74460891	+	ENST00000233615.6@WBP1	ENST00000233615.6	protein_coding	74458329,74459643,74459873,74460221	74458671,74459745,74460049,74460891	Gene ID= ENSG00000239779.6 TPM= 8.21 Transcript Type= protein_coding
chr2	74461057	74465410	74461057	74465410	-	ENST00000233616.8@MOGS	ENST00000233616.8	protein_coding	74464896,74464496,74463190,74461057	74465410,74464722,74463386,74463012	Gene ID= ENSG00000115275.11 TPM= 4.83 Transcript Type= protein_coding
chr2	74463662	74465399	74463662	74465399	-	transcript2454.chr2.nnic@NA	transcript2454.chr2.nnic	NA	74463662	74465399	Gene ID= novel_gene_chr2_2455 TPM= 5.79 Transcript Type= NA
chr2	74471986	74472687	74471986	74472687	-	ENST00000409710.1@MRPL53	ENST00000409710.1	protein_coding	74472569,74471986	74472687,74472252	Gene ID= ENSG00000204822.6 TPM= 15.28 Transcript Type= protein_coding
chr2	74471993	74472664	74471993	74472664	-	ENST00000468875.1@MRPL53	ENST00000468875.1	protein_coding	74472569,74471993	74472664,74472470	Gene ID= ENSG00000204822.6 TPM= 3.21 Transcript Type= retained_intron
chr2	74471992	74472547	74471992	74472547	-	ENST00000467349.1@MRPL53	ENST00000467349.1	protein_coding	74472358,74471992	74472547,74472252	Gene ID= ENSG00000204822.6 TPM= 13.35 Transcript Type= retained_intron
chr2	74471986	74482926	74471986	74482926	-	transcript2458.chr2.nnic@CCDC142	transcript2458.chr2.nnic	protein_coding	74481817,74481452,74481223,74480956,74480769,74475612,74475225,74474916,74474698,74472569,74472358,74471986	74482926,74481538,74481372,74481086,74480882,74475726,74475402,74475115,74474802,74472796,74472470,74472252	Gene ID= ENSG00000135637.13 TPM= 98.46 Transcript Type= NA
chr2	74505043	74508580	74505043	74508580	-	ENST00000233630.10@PCGF1	ENST00000233630.10	protein_coding	74507576,74507042,74506732,74506181,74505952,74505737,74505552,74505339,74505043	74508580,74507147,74506884,74506252,74506057,74505770,74505638,74505419,74505190	Gene ID= ENSG00000115289.13 TPM= 2.25 Transcript Type= protein_coding
chr2	74505043	74507401	74505043	74507401	-	transcript2476.chr2.nic@PCGF1	transcript2476.chr2.nic	protein_coding	74506732,74506181,74505952,74505737,74505552,74505339,74505043	74507401,74506252,74506057,74505770,74505638,74505419,74505190	Gene ID= ENSG00000115289.13 TPM= 3.86 Transcript Type= NA
chr2	74505043	74507411	74505043	74507411	-	transcript2478.chr2.nic@PCGF1	transcript2478.chr2.nic	protein_coding	74506732,74505737,74505552,74505339,74505043	74507411,74505770,74505638,74505419,74505190	Gene ID= ENSG00000115289.13 TPM= 2.58 Transcript Type= NA
chr2	74505043	74507416	74505043	74507416	-	ENST00000475863.5@PCGF1	ENST00000475863.5	protein_coding	74507042,74506732,74506181,74505952,74505737,74505552,74505339,74505043	74507416,74506884,74506252,74506057,74505770,74505638,74505419,74505190	Gene ID= ENSG00000115289.13 TPM= 16.41 Transcript Type= retained_intron
chr2	74526648	74529939	74526648	74529939	-	ENST00000377526.3@AUP1	ENST00000377526.3	protein_coding	74529580,74529362,74529132,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526648	74529939,74529499,74529282,74528935,74528489,74528321,74528006,74527838,74527590,74527363,74527059,74526836	Gene ID= ENSG00000115307.16 TPM= 269.71 Transcript Type= protein_coding
chr2	74526689	74529685	74526689	74529685	-	ENST00000466894.5@AUP1	ENST00000466894.5	protein_coding	74529580,74529362,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526689	74529685,74529499,74529282,74528489,74528321,74528006,74527838,74527590,74527363,74527121,74526836	Gene ID= ENSG00000115307.16 TPM= 3.86 Transcript Type= retained_intron
chr2	74526652	74529697	74526652	74529697	-	ENST00000463900.5@AUP1	ENST00000463900.5	protein_coding	74529580,74529362,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526652	74529697,74529499,74529282,74528489,74528321,74528006,74527838,74527590,74527363,74527059,74526836	Gene ID= ENSG00000115307.16 TPM= 28.38 Transcript Type= retained_intron
chr2	74529377	74533348	74529377	74533348	+	ENST00000258080.7@HTRA2	ENST00000258080.7	protein_coding	74529377,74530617,74530911,74531339,74531597,74531856,74532619,74532820	74530512,74530821,74531105,74531371,74531702,74531925,74532714,74533348	Gene ID= ENSG00000115317.11 TPM= 23.17 Transcript Type= protein_coding
chr2	74554086	74557554	74554086	74557554	+	ENST00000233668.9@DOK1	ENST00000233668.9	protein_coding	74554086,74555154,74555575,74555894,74556308	74554814,74555453,74555668,74556078,74557554	Gene ID= ENSG00000115325.13 TPM= 2.9 Transcript Type= protein_coding
chr2	74832654	74835519	74832654	74835519	-	transcript2526.chr2.nnic@NA	transcript2526.chr2.nnic	NA	74832654	74835519	Gene ID= novel_gene_chr2_2527 TPM= 5.79 Transcript Type= NA
chr2	74833981	74893359	74833981	74893359	+	ENST00000290573.6@HK2	ENST00000290573.6	protein_coding	74833981,74854293,74867636,74872300,74873276,74873844,74874266,74877166,74878688,74880265,74881711,74882120,74885494,74886294,74886490,74887903,74889245,74890797	74834643,74854455,74867784,74872419,74873371,74873943,74874449,74877321,74878921,74880569,74881859,74882239,74885589,74886393,74886673,74888058,74889478,74893359	Gene ID= ENSG00000159399.9 TPM= 186.31 Transcript Type= protein_coding
chr2	74834149	74893359	74834149	74893359	+	transcript2518.chr2.nnic@HK2	transcript2518.chr2.nnic	protein_coding	74834149,74854293,74867636,74872300,74873276,74873844,74874266,74877166,74878688,74880265,74881711,74882120,74885494,74886294,74886490,74887903,74889245,74890797	74834643,74854455,74867784,74872419,74873371,74873943,74874449,74877321,74878921,74880569,74881859,74882302,74885589,74886393,74886673,74888058,74889478,74893359	Gene ID= ENSG00000159399.9 TPM= 44.4 Transcript Type= NA
chr2	74958492	74970128	74958492	74970128	+	ENST00000483063.1@POLE4	ENST00000483063.1	protein_coding	74958492,74959341,74960105,74969409	74958892,74959425,74960146,74970128	Gene ID= ENSG00000115350.11 TPM= 26.06 Transcript Type= protein_coding
chr2	75641904	75655731	75641904	75655731	+	transcript2539.chr2.nnic@MRPL19	transcript2539.chr2.nnic	protein_coding	75641904,75646730,75647102,75652142,75652523,75654736,75655064	75642120,75646910,75647219,75652260,75652657,75654917,75655731	Gene ID= ENSG00000115364.13 TPM= 41.99 Transcript Type= NA
chr2	75641891	75655731	75641891	75655731	+	transcript2541.chr2.nnic@MRPL19	transcript2541.chr2.nnic	protein_coding	75641891,75647102,75652142,75652523,75654736,75655064	75642120,75647219,75652260,75652657,75654917,75655731	Gene ID= ENSG00000115364.13 TPM= 5.31 Transcript Type= NA
chr2	75662706	75710989	75662706	75710989	-	ENST00000321027.7@GCFC2	ENST00000321027.7	protein_coding	75710591,75706523,75702199,75701190,75696200,75694241,75691977,75690638,75689969,75689026,75687827,75680193,75673444,75671950,75670138,75665929,75662706	75710989,75706651,75702423,75701287,75696315,75694427,75692100,75690719,75690081,75689225,75687977,75680314,75673520,75672016,75670284,75666053,75664783	Gene ID= ENSG00000005436.13 TPM= 11.58 Transcript Type= protein_coding
chr2	75701796	75710899	75701796	75710899	-	ENST00000470503.1@GCFC2	ENST00000470503.1	protein_coding	75710591,75706523,75701796	75710899,75706651,75702423	Gene ID= ENSG00000005436.13 TPM= 11.58 Transcript Type= protein_coding
chr2	82826146	82839217	82826146	82839217	+	transcript2550.chr2.nnic@NA	transcript2550.chr2.nnic	NA	82826146,82827672,82837844	82826371,82827777,82839217	Gene ID= novel_gene_chr2_2551 TPM= 3.86 Transcript Type= NA
chr2	84423523	84459480	84423523	84459480	-	ENST00000393868.6@SUCLG1	ENST00000393868.6	protein_coding	84459173,84449649,84443284,84441247,84441047,84433352,84431508,84425415,84423523	84459480,84449752,84443400,84441459,84441104,84433435,84431659,84425603,84423772	Gene ID= ENSG00000163541.11 TPM= 201.59 Transcript Type= protein_coding
chr2	84905625	84906675	84905625	84906675	+	ENST00000233143.5@TMSB10	ENST00000233143.5	protein_coding	84905625,84906003,84906389	84905718,84906117,84906675	Gene ID= ENSG00000034510.5 TPM= 193.06 Transcript Type= protein_coding
chr2	84905772	84906675	84905772	84906675	+	transcript2565.chr2.nic@TMSB10	transcript2565.chr2.nic	protein_coding	84905772,84906389	84906117,84906675	Gene ID= ENSG00000034510.5 TPM= 18.34 Transcript Type= NA
chr2	84968611	84970977	84968611	84970977	-	transcript2590.chr2.nnic@NA	transcript2590.chr2.nnic	NA	84968611	84970977	Gene ID= novel_gene_chr2_2591 TPM= 2.9 Transcript Type= NA
chr2	85133410	85310388	85133410	85310388	+	ENST00000282111.3@TCF7L1	ENST00000282111.3	protein_coding	85133410,85134016,85134323,85283495,85302484,85303895,85304255,85305260,85306206,85306452,85307642,85309029	85133933,85134079,85134450,85283578,85302616,85303997,85304338,85305403,85306365,85306559,85307717,85310388	Gene ID= ENSG00000152284.4 TPM= 16.41 Transcript Type= protein_coding
chr2	85318027	85328251	85318027	85328251	-	ENST00000398263.6@TGOLN2	ENST00000398263.6	protein_coding	85327917,85326979,85326508,85324915,85318027	85328251,85327685,85326804,85324998,85322741	Gene ID= ENSG00000152291.13 TPM= 14.96 Transcript Type= protein_coding
chr2	85318024	85328425	85318024	85328425	-	ENST00000377386.7@TGOLN2	ENST00000377386.7	protein_coding	85327917,85326508,85324915,85318024	85328425,85327685,85324998,85322741	Gene ID= ENSG00000152291.13 TPM= 17.86 Transcript Type= protein_coding
chr2	85321894	85328024	85321894	85328024	-	ENST00000409232.7@TGOLN2	ENST00000409232.7	protein_coding	85327917,85326508,85324915,85321894	85328024,85327685,85324998,85322758	Gene ID= ENSG00000152291.13 TPM= 2.9 Transcript Type= protein_coding
chr2	85342088	85354620	85342088	85354620	-	ENST00000295802.8@RETSAT	ENST00000295802.8	protein_coding	85354336,85351680,85350780,85350040,85349384,85345975,85344594,85344239,85343999,85343639,85342088	85354620,85351862,85351021,85350241,85349581,85346094,85344732,85344348,85344165,85343798,85343381	Gene ID= ENSG00000042445.13 TPM= 32.34 Transcript Type= protein_coding
chr2	85342088	85347573	85342088	85347573	-	transcript2653.chr2.nic@RETSAT	transcript2653.chr2.nic	protein_coding	85344594,85344239,85343999,85343639,85342088	85347573,85344348,85344165,85343798,85343381	Gene ID= ENSG00000042445.13 TPM= 3.38 Transcript Type= NA
chr2	85354720	85391748	85354720	85391748	+	ENST00000409013.7@ELMOD3	ENST00000409013.7	protein_coding	85354720,85355076,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355170,85355598,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 5.18 Transcript Type= protein_coding
chr2	85354726	85391748	85354726	85391748	+	transcript2618.chr2.nic@ELMOD3	transcript2618.chr2.nic	protein_coding	85354726,85355076,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355170,85355716,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 3.25 Transcript Type= NA
chr2	85354735	85391748	85354735	85391748	+	transcript2622.chr2.nnic@ELMOD3	transcript2622.chr2.nnic	protein_coding	85354735,85356967,85362186,85363097,85368686,85369739,85371086,85377344,85377945,85387098,85389751,85390138,85390760	85354829,85357252,85362260,85363166,85368754,85369830,85371209,85377474,85378023,85387225,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 3.54 Transcript Type= NA
chr2	85354735	85391748	85354735	85391748	+	transcript2627.chr2.nic@ELMOD3	transcript2627.chr2.nic	protein_coding	85354735,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355896,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 3.25 Transcript Type= NA
chr2	85354726	85391748	85354726	85391748	+	transcript2632.chr2.nic@ELMOD3	transcript2632.chr2.nic	protein_coding	85354726,85355076,85356967,85362186,85363097,85368686,85369739,85371086,85377344,85389751,85390138,85390760	85354829,85355170,85357252,85362260,85363166,85368754,85369830,85371209,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 3.74 Transcript Type= NA
chr2	85354726	85356895	85354726	85356895	+	transcript2655.chr2.nic@ELMOD3	transcript2655.chr2.nic	protein_coding	85354726,85355076,85355555	85354829,85355170,85356895	Gene ID= ENSG00000115459.17 TPM= 1.93 Transcript Type= NA
chr2	85354726	85356895	85354726	85356895	+	transcript2657.chr2.nic@ELMOD3	transcript2657.chr2.nic	protein_coding	85354726,85355076	85354829,85356895	Gene ID= ENSG00000115459.17 TPM= 2.9 Transcript Type= NA
chr2	85354757	85391748	85354757	85391748	+	ENST00000393852.8@ELMOD3	ENST00000393852.8	protein_coding	85354757,85355076,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355170,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 6.15 Transcript Type= protein_coding
chr2	85394748	85410553	85394748	85410553	-	ENST00000263867.8@CAPG	ENST00000263867.8	protein_coding	85410317,85402123,85401785,85401529,85401165,85399136,85398690,85398020,85395538,85394748	85410553,85402158,85401957,85401683,85401329,85399285,85398782,85398152,85395626,85394958	Gene ID= ENSG00000042493.15 TPM= 1.93 Transcript Type= protein_coding
chr2	85394767	85419507	85394767	85419507	-	transcript2648.chr2.nnic@CAPG	transcript2648.chr2.nnic	protein_coding	85419407,85402123,85401785,85401529,85401165,85399136,85398690,85398020,85395538,85394767	85419507,85402158,85401957,85401683,85401329,85399285,85398782,85398152,85395626,85394958	Gene ID= ENSG00000042493.15 TPM= 2.9 Transcript Type= NA
chr2	85537467	85539557	85537467	85539557	-	transcript2683.chr2.nnic@NA	transcript2683.chr2.nnic	NA	85537467	85539557	Gene ID= novel_gene_chr2_2684 TPM= 6.76 Transcript Type= NA
chr2	85539165	85545280	85539165	85545280	+	ENST00000306434.7@MAT2A	ENST00000306434.7	protein_coding	85539165,85541083,85541255,85541633,85541829,85542155,85542565,85542901,85543670	85539378,85541160,85541377,85541745,85541972,85542373,85542747,85543034,85545280	Gene ID= ENSG00000168906.12 TPM= 247.55 Transcript Type= protein_coding
chr2	85539163	85545280	85539163	85545280	+	transcript2667.chr2.nic@MAT2A	transcript2667.chr2.nic	protein_coding	85539163,85541083,85541255,85541633,85541829,85542155,85542565,85542901	85539378,85541160,85541377,85541745,85541972,85542373,85542747,85545280	Gene ID= ENSG00000168906.12 TPM= 60.04 Transcript Type= NA
chr2	85558725	85561547	85558725	85561547	-	ENST00000496962.1@GGCX	ENST00000496962.1	protein_coding	85561386,85560815,85558725	85561547,85560985,85559075	Gene ID= ENSG00000115486.11 TPM= 5.79 Transcript Type= processed_transcript
chr2	85577491	85582031	85577491	85582031	+	ENST00000263864.9@VAMP8	ENST00000263864.9	protein_coding	85577491,85579009,85581576	85577649,85579167,85582031	Gene ID= ENSG00000118640.10 TPM= 2.9 Transcript Type= protein_coding
chr2	85561562	85581997	85561562	85581997	+	ENST00000432071.1@VAMP8	ENST00000432071.1	protein_coding	85561562,85579009,85581576	85561644,85579167,85581997	Gene ID= ENSG00000118640.10 TPM= 1.93 Transcript Type= protein_coding
chr2	85584408	85593412	85584408	85593412	+	ENST00000306384.4@VAMP5	ENST00000306384.4	protein_coding	85584408,85591725,85592948	85584493,85591862,85593412	Gene ID= ENSG00000168899.4 TPM= 72.4 Transcript Type= protein_coding
chr2	85595745	85597581	85595745	85597581	+	transcript2742.chr2.nnic@RNF181	transcript2742.chr2.nnic	protein_coding	85595745,85596519,85597104,85597445	85595849,85596649,85597178,85597581	Gene ID= ENSG00000168894.9 TPM= 4.34 Transcript Type= NA
chr2	85595734	85597581	85595734	85597581	+	ENST00000306368.8@RNF181	ENST00000306368.8	protein_coding	85595734,85596519,85596822,85597104,85597445	85595849,85596649,85596931,85597178,85597581	Gene ID= ENSG00000168894.9 TPM= 43.92 Transcript Type= protein_coding
chr2	85598548	85602717	85598548	85602717	-	transcript2719.chr2.nic@TMEM150A	transcript2719.chr2.nic	protein_coding	85602607,85601884,85601306,85601021,85600345,85599891,85599525,85598548	85602717,85602064,85601482,85601107,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 8.88 Transcript Type= NA
chr2	85598548	85602717	85598548	85602717	-	transcript2727.chr2.nnic@TMEM150A	transcript2727.chr2.nnic	protein_coding	85602607,85602027,85601021,85600345,85599891,85599525,85598548	85602717,85602064,85601107,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 4.05 Transcript Type= NA
chr2	85598548	85602717	85598548	85602717	-	transcript2734.chr2.nnic@TMEM150A	transcript2734.chr2.nnic	protein_coding	85602607,85601884,85601021,85599891,85599525,85598548	85602717,85602064,85601107,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 3.41 Transcript Type= NA
chr2	85598548	85602698	85598548	85602698	-	ENST00000306353.7@TMEM150A	ENST00000306353.7	protein_coding	85602607,85601884,85601435,85601021,85599891,85599525,85598548	85602698,85602064,85601482,85601107,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 11.13 Transcript Type= protein_coding
chr2	85598578	85602659	85598578	85602659	-	ENST00000444380.5@TMEM150A	ENST00000444380.5	protein_coding	85602607,85601884,85601021,85600345,85599891,85599525,85598578	85602659,85602064,85601482,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 16.41 Transcript Type= retained_intron
chr2	85598562	85602678	85598562	85602678	-	ENST00000334462.9@TMEM150A	ENST00000334462.9	protein_coding	85602607,85601884,85601435,85601021,85600345,85599891,85599525,85598562	85602678,85602064,85601482,85601107,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 66.61 Transcript Type= protein_coding
chr2	85602417	85605308	85602417	85605308	+	transcript2755.chr2.nnic@NA	transcript2755.chr2.nnic	NA	85602417	85605308	Gene ID= novel_gene_chr2_2756 TPM= 9.65 Transcript Type= NA
chr2	85616094	85649280	85616094	85649280	+	transcript2707.chr2.nic@USP39	transcript2707.chr2.nic	protein_coding	85616094,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85645814,85647930,85648761	85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85645899,85648016,85649280	Gene ID= ENSG00000168883.19 TPM= 5.39 Transcript Type= NA
chr2	85602841	85649280	85602841	85649280	+	transcript2710.chr2.nic@USP39	transcript2710.chr2.nic	protein_coding	85602841,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761	85603081,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649280	Gene ID= ENSG00000168883.19 TPM= 8.28 Transcript Type= NA
chr2	85602856	85649280	85602856	85649280	+	ENST00000459775.5@USP39	ENST00000459775.5	protein_coding	85602856,85619220,85621485,85623626,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761	85603081,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649280	Gene ID= ENSG00000168883.19 TPM= 6.35 Transcript Type= processed_transcript
chr2	85616186	85649277	85616186	85649277	+	ENST00000323701.10@USP39	ENST00000323701.10	protein_coding	85616186,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761	85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649277	Gene ID= ENSG00000168883.19 TPM= 53.01 Transcript Type= protein_coding
chr2	85616169	85649280	85616169	85649280	+	ENST00000409470.5@USP39	ENST00000409470.5	protein_coding	85616169,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761,85649017	85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85648853,85649280	Gene ID= ENSG00000168883.19 TPM= 3.21 Transcript Type= protein_coding
chr2	85610761	85612090	85610761	85612090	-	transcript2750.chr2.nic@C2orf68	transcript2750.chr2.nic	protein_coding	85611878,85611668,85610761	85612090,85611786,85611573	Gene ID= ENSG00000168887.10 TPM= 1.93 Transcript Type= NA
chr2	85610220	85612032	85610220	85612032	-	ENST00000409734.3@C2orf68	ENST00000409734.3	protein_coding	85611878,85610220	85612032,85611786	Gene ID= ENSG00000168887.10 TPM= 1.93 Transcript Type= protein_coding
chr2	85674793	85684034	85674793	85684034	+	transcript2765.chr2.nnic@NA	transcript2765.chr2.nnic	NA	85674793,85682442,85683060	85674966,85682530,85684034	Gene ID= novel_gene_chr2_2766 TPM= 1.93 Transcript Type= NA
chr2	85694358	85698744	85694358	85698744	+	ENST00000524600.5@GNLY	ENST00000524600.5	protein_coding	85694358,85694916,85695320,85695958,85697506,85698564	85694470,85694996,85695423,85696056,85697677,85698744	Gene ID= ENSG00000115523.16 TPM= 5.79 Transcript Type= protein_coding
chr2	85753787	85788066	85753787	85788066	+	transcript2791.chr2.nnic@ATOH8	transcript2791.chr2.nnic	protein_coding	85753787,85763991,85770017,85786885	85754957,85764182,85770219,85788066	Gene ID= ENSG00000168874.12 TPM= 13.18 Transcript Type= NA
chr2	85753787	85788039	85753787	85788039	+	transcript2793.chr2.nnic@ATOH8	transcript2793.chr2.nnic	protein_coding	85753787,85763991,85780965,85786885	85754957,85764182,85781166,85788039	Gene ID= ENSG00000168874.12 TPM= 3.28 Transcript Type= NA
chr2	85754131	85775208	85754131	85775208	+	transcript2800.chr2.nnic@ATOH8	transcript2800.chr2.nnic	protein_coding	85754131,85763991,85772862	85754957,85764182,85775208	Gene ID= ENSG00000168874.12 TPM= 19.31 Transcript Type= NA
chr2	85753786	85788057	85753786	85788057	+	transcript2802.chr2.nnic@ATOH8	transcript2802.chr2.nnic	protein_coding	85753786,85786885	85754957,85788057	Gene ID= ENSG00000168874.12 TPM= 12.21 Transcript Type= NA
chr2	85753894	85788066	85753894	85788066	+	ENST00000306279.3@ATOH8	ENST00000306279.3	protein_coding	85753894,85763991,85786885	85754957,85764182,85788066	Gene ID= ENSG00000168874.12 TPM= 84.61 Transcript Type= protein_coding
chr2	85787123	85791382	85787123	85791382	+	transcript2805.chr2.nnic@NA	transcript2805.chr2.nnic	NA	85787123	85791382	Gene ID= novel_gene_chr2_2806 TPM= 5.79 Transcript Type= NA
chr2	85837120	85889055	85837120	85889055	-	ENST00000638572.1@ST3GAL5	ENST00000638572.1	protein_coding	85888824,85863362,85861181,85847861,85846377,85844396,85837120	85889055,85863485,85861292,85848204,85846563,85844554,85840392	Gene ID= ENSG00000115525.17 TPM= 13.51 Transcript Type= protein_coding
chr2	85839194	85889000	85839194	85889000	-	ENST00000638227.1@ST3GAL5	ENST00000638227.1	protein_coding	85888824,85870072,85863362,85861181,85847861,85846377,85844396,85839194	85889000,85870258,85863485,85861292,85848204,85846563,85844554,85840392	Gene ID= ENSG00000115525.17 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr2	86087944	86105837	86087944	86105837	-	transcript2809.chr2.nic@POLR1A	transcript2809.chr2.nic	protein_coding	86105700,86099968,86098611,86089822,86088785,86087944	86105837,86100172,86098760,86089929,86088870,86088669	Gene ID= ENSG00000068654.15 TPM= 1.93 Transcript Type= NA
chr2	86020888	86022351	86020888	86022351	-	transcript2813.chr2.nnic@NA	transcript2813.chr2.nnic	NA	86020888	86022351	Gene ID= novel_gene_chr2_2814 TPM= 2.9 Transcript Type= NA
chr2	86106182	86142157	86106182	86142157	+	ENST00000254630.11@PTCD3	ENST00000254630.11	protein_coding	86106182,86108350,86108500,86111113,86116530,86117055,86118921,86121479,86123701,86124995,86125455,86125795,86127161,86127941,86130648,86131078,86132318,86133178,86133346,86134292,86134839,86136521,86136982,86137469	86106351,86108402,86108536,86111158,86116598,86117159,86119044,86121594,86123762,86125082,86125515,86125880,86127305,86127991,86130737,86131106,86132424,86133256,86133436,86134377,86134987,86136562,86137140,86142157	Gene ID= ENSG00000132300.18 TPM= 5.79 Transcript Type= protein_coding
chr2	86106223	86138188	86106223	86138188	+	transcript2824.chr2.nnic@PTCD3	transcript2824.chr2.nnic	protein_coding	86106223,86108350,86108500,86111113,86116530,86117055,86118921,86119544,86121479,86123701,86124995,86125795,86127161,86130648,86131078,86132318,86133178,86133346,86134292,86134839,86136521,86136982,86137469	86106351,86108402,86108536,86111158,86116598,86117159,86119044,86119614,86121594,86123762,86125082,86125880,86127991,86130737,86131106,86132424,86133256,86133436,86134377,86134987,86136562,86137140,86138188	Gene ID= ENSG00000132300.18 TPM= 3.86 Transcript Type= NA
chr2	86106223	86138137	86106223	86138137	+	transcript2829.chr2.nnic@PTCD3	transcript2829.chr2.nnic	protein_coding	86106223,86108350,86108500,86111113,86116530,86117055,86118921,86121479,86123701,86124995,86127161,86127941,86130648,86131078,86132318,86133178,86133346,86134292,86134839,86136521,86136982,86137469	86106351,86108402,86108536,86111158,86116598,86117159,86119044,86121594,86123762,86125082,86127305,86127991,86130737,86131106,86132424,86133256,86133436,86134377,86134987,86136562,86137140,86138137	Gene ID= ENSG00000132300.18 TPM= 1.93 Transcript Type= NA
chr2	86143932	86195770	86143932	86195770	-	ENST00000410111.7@IMMT	ENST00000410111.7	protein_coding	86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143932	86195770,86181372,86179622,86173761,86171345,86170844,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 54.35 Transcript Type= protein_coding
chr2	86143936	86195626	86143936	86195626	-	transcript2840.chr2.nic@IMMT	transcript2840.chr2.nic	protein_coding	86195338,86181299,86179433,86173650,86171208,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143936	86195626,86181372,86179622,86173761,86171312,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 110.5 Transcript Type= NA
chr2	86143936	86195626	86143936	86195626	-	transcript2841.chr2.nic@IMMT	transcript2841.chr2.nic	protein_coding	86195338,86181299,86179433,86173650,86171208,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143936	86195626,86181372,86179622,86173761,86171345,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 85.4 Transcript Type= NA
chr2	86143932	86195472	86143932	86195472	-	ENST00000449247.6@IMMT	ENST00000449247.6	protein_coding	86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143932	86195472,86181372,86179622,86173761,86171312,86170844,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 90.06 Transcript Type= protein_coding
chr2	86143936	86195403	86143936	86195403	-	ENST00000442664.6@IMMT	ENST00000442664.6	protein_coding	86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143936	86195403,86181372,86179622,86173761,86171345,86170841,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 9.14 Transcript Type= protein_coding
chr2	86199457	86213794	86199457	86213794	+	ENST00000337109.8@MRPL35	ENST00000337109.8	protein_coding	86199457,86206106,86207183,86210480	86199533,86206295,86207327,86213794	Gene ID= ENSG00000132313.14 TPM= 8.69 Transcript Type= protein_coding
chr2	86213993	86337717	86213993	86337717	-	transcript2854.chr2.nnic@REEP1	transcript2854.chr2.nnic	protein_coding	86337479,86282170,86263965,86254694,86251957,86239922,86232625,86227363,86219970,86213993	86337717,86282242,86264041,86254814,86252070,86240071,86232802,86227398,86220121,86217110	Gene ID= ENSG00000068615.17 TPM= 2.9 Transcript Type= NA
chr2	86441379	86492716	86441379	86492716	+	transcript2868.chr2.nnic@KDM3A	transcript2868.chr2.nnic	protein_coding	86441379,86442018,86449807,86451103,86455085,86456442,86456805,86456983,86464053,86466372,86470204,86474776,86477877,86478170,86478608,86480097,86481930,86482458,86483987,86484942,86485729,86489318,86489520,86490881,86491141,86492039	86441444,86442233,86449962,86451213,86455187,86456566,86456877,86457071,86464216,86466883,86470408,86474990,86478029,86478265,86478735,86480362,86482102,86482694,86484158,86485029,86485859,86489437,86489659,86491057,86491275,86492716	Gene ID= ENSG00000115548.16 TPM= 2.9 Transcript Type= NA
chr2	86440801	86492716	86440801	86492716	+	ENST00000409556.5@KDM3A	ENST00000409556.5	protein_coding	86440801,86441272,86442018,86449807,86451103,86455085,86456442,86456805,86456983,86464053,86466372,86470204,86474776,86477877,86478170,86478608,86480167,86481930,86482458,86483987,86484942,86485729,86489318,86489520,86490881,86491141,86492039	86440962,86441444,86442233,86449962,86451213,86455187,86456566,86456877,86457071,86464216,86466883,86470408,86474990,86478029,86478265,86478735,86480362,86482102,86482694,86484158,86485029,86485859,86489437,86489659,86491057,86491275,86492716	Gene ID= ENSG00000115548.16 TPM= 10.62 Transcript Type= protein_coding
chr2	86499591	86504552	86499591	86504552	-	transcript2893.chr2.nnic@NA	transcript2893.chr2.nnic	NA	86499591	86504552	Gene ID= novel_gene_chr2_2894 TPM= 18.34 Transcript Type= NA
chr2	86503431	86563477	86503431	86563477	-	ENST00000263856.8@CHMP3	ENST00000263856.8	protein_coding	86563304,86542252,86529218,86510358,86507479,86503431	86563477,86542312,86529397,86510479,86507593,86505949	Gene ID= ENSG00000115561.15 TPM= 17.38 Transcript Type= protein_coding
chr2	86505444	86563479	86505444	86563479	-	ENST00000409225.2@CHMP3	ENST00000409225.2	protein_coding	86563304,86529218,86510358,86507479,86505444	86563479,86529397,86510479,86507593,86505949	Gene ID= ENSG00000115561.15 TPM= 3.86 Transcript Type= protein_coding
chr2	86504528	86623876	86504528	86623876	-	transcript2874.chr2.nic@RNF103-CHMP3	transcript2874.chr2.nic	protein_coding	86622661,86620330,86542252,86529218,86510358,86507479,86504528	86623876,86620469,86542312,86529397,86510479,86507593,86505949	Gene ID= ENSG00000249884.8 TPM= 5.79 Transcript Type= NA
chr2	86603402	86623854	86603402	86623854	-	transcript2889.chr2.nnic@RNF103-CHMP3	transcript2889.chr2.nnic	protein_coding	86622661,86620330,86603402	86623854,86620469,86605418	Gene ID= ENSG00000249884.8 TPM= 8.21 Transcript Type= NA
chr2	86522253	86526363	86522253	86526363	+	transcript2891.chr2.nnic@NA	transcript2891.chr2.nnic	NA	86522253	86526363	Gene ID= novel_gene_chr2_2892 TPM= 1.93 Transcript Type= NA
chr2	86603393	86623855	86603393	86623855	-	ENST00000237455.4@RNF103	ENST00000237455.4	protein_coding	86622661,86620330,86612159,86603393	86623855,86620469,86612274,86605418	Gene ID= ENSG00000239305.6 TPM= 80.6 Transcript Type= protein_coding
chr2	86720344	86773862	86720344	86773862	+	transcript2901.chr2.nnic@RMND5A	transcript2901.chr2.nnic	protein_coding	86720344,86740927,86751896,86753458,86765027,86765859,86770023,86771558,86773348	86721514,86741069,86752030,86753558,86765193,86766024,86770125,86771712,86773862	Gene ID= ENSG00000153561.12 TPM= 1.93 Transcript Type= NA
chr2	86773571	86777801	86773571	86777801	+	transcript2904.chr2.nnic@NA	transcript2904.chr2.nnic	NA	86773571	86777801	Gene ID= novel_gene_chr2_2905 TPM= 102.32 Transcript Type= NA
chr2	87030675	87076455	87030675	87076455	-	transcript2908.chr2.nnic@AC125232.1	transcript2908.chr2.nnic	unprocessed_pseudogene	87075919,87055658,87052814,87049589,87047188,87043713,87037294,87034152,87032069,87031816,87030675	87076455,87055800,87052992,87049778,87047306,87043984,87037528,87034243,87032203,87031898,87030907	Gene ID= ENSG00000231259.4 TPM= 2.9 Transcript Type= NA
chr2	87455429	87521518	87455429	87521518	+	ENST00000331944.10@CYTOR	ENST00000331944.10	lincRNA	87455429,87521207	87455645,87521518	Gene ID= ENSG00000222041.10 TPM= 1.93 Transcript Type= lincRNA
chr2	88027205	88055824	88027205	88055824	-	transcript2915.chr2.nnic@KRCC1	transcript2915.chr2.nnic	protein_coding	88055626,88036943,88034134,88027205	88055824,88037051,88034231,88028585	Gene ID= ENSG00000172086.7 TPM= 4.83 Transcript Type= NA
chr2	88027205	88055729	88027205	88055729	-	ENST00000347055.3@KRCC1	ENST00000347055.3	protein_coding	88055626,88036943,88034134,88027205	88055729,88037051,88034292,88028585	Gene ID= ENSG00000172086.7 TPM= 20.27 Transcript Type= protein_coding
chr2	88067780	88113387	88067780	88113387	+	ENST00000419482.6@SMYD1	ENST00000419482.6	protein_coding	88067780,88084316,88087862,88091012,88093517,88096595,88103058,88106325,88108371,88110354	88068001,88084492,88088075,88091142,88093555,88096784,88103150,88106488,88108539,88113387	Gene ID= ENSG00000115593.14 TPM= 73.36 Transcript Type= protein_coding
chr2	88067825	88110854	88067825	88110854	+	ENST00000444564.2@SMYD1	ENST00000444564.2	protein_coding	88067825,88084316,88087862,88091012,88096595,88103058,88106325,88108371,88110354	88068001,88084492,88088075,88091142,88096784,88103150,88106488,88108539,88110854	Gene ID= ENSG00000115593.14 TPM= 17.38 Transcript Type= protein_coding
chr2	88170308	88186626	88170308	88186626	+	transcript2938.chr2.nnic@THNSL2	transcript2938.chr2.nnic	protein_coding	88170308,88173139,88174639,88175249,88178783,88182699,88182948,88185328,88185898	88170438,88173373,88174833,88175401,88179013,88182847,88183073,88185479,88186626	Gene ID= ENSG00000144115.16 TPM= 9.82 Transcript Type= NA
chr2	88170308	88186627	88170308	88186627	+	transcript2940.chr2.nnic@THNSL2	transcript2940.chr2.nnic	protein_coding	88170308,88173139,88174639,88175249,88178783,88182699,88182948,88185328,88185898	88170438,88173373,88174833,88175401,88179013,88182847,88183073,88185724,88186627	Gene ID= ENSG00000144115.16 TPM= 6.44 Transcript Type= NA
chr2	88170308	88186636	88170308	88186636	+	transcript2956.chr2.nnic@THNSL2	transcript2956.chr2.nnic	protein_coding	88170308,88173139,88174639,88175249,88178783,88182699,88182948,88185898	88170438,88173373,88174833,88175401,88179013,88182847,88183073,88186636	Gene ID= ENSG00000144115.16 TPM= 13.77 Transcript Type= NA
chr2	88170638	88186627	88170638	88186627	+	transcript2961.chr2.nic@THNSL2	transcript2961.chr2.nic	protein_coding	88170638,88174639,88175249,88178783,88182699,88182948,88185328,88185898	88173373,88174833,88175401,88179013,88182847,88183073,88185724,88186627	Gene ID= ENSG00000144115.16 TPM= 3.86 Transcript Type= NA
chr2	88170390	88186636	88170390	88186636	+	transcript2964.chr2.nnic@THNSL2	transcript2964.chr2.nnic	protein_coding	88170390,88173139,88175249,88178783,88182699,88182948,88185898	88170456,88173373,88175401,88179013,88182847,88183073,88186636	Gene ID= ENSG00000144115.16 TPM= 3.16 Transcript Type= NA
chr2	88170326	88186636	88170326	88186636	+	transcript2966.chr2.nnic@THNSL2	transcript2966.chr2.nnic	protein_coding	88170326,88174639,88175249,88178783,88182699,88182948,88185898	88170456,88174833,88175401,88179013,88182847,88183073,88186636	Gene ID= ENSG00000144115.16 TPM= 3.16 Transcript Type= NA
chr2	88170638	88186636	88170638	88186636	+	transcript2967.chr2.nic@THNSL2	transcript2967.chr2.nic	protein_coding	88170638,88174639,88175249,88178783,88182699,88182948,88185898	88173373,88174833,88175401,88179013,88182847,88183073,88186636	Gene ID= ENSG00000144115.16 TPM= 6.37 Transcript Type= NA
chr2	88170353	88186626	88170353	88186626	+	ENST00000449349.5@THNSL2	ENST00000449349.5	protein_coding	88170353,88171227,88173251,88174639,88175249,88178783,88185898	88170456,88171307,88173373,88174833,88175401,88179013,88186626	Gene ID= ENSG00000144115.16 TPM= 1.61 Transcript Type= protein_coding
chr2	88170398	88186627	88170398	88186627	+	ENST00000343544.8@THNSL2	ENST00000343544.8	protein_coding	88170398,88173139,88174639,88175249,88178783,88182699,88182948,88185551,88185898	88170456,88173373,88174833,88175401,88179013,88182847,88183073,88185724,88186627	Gene ID= ENSG00000144115.16 TPM= 1.61 Transcript Type= protein_coding
chr2	88556743	88627459	88556743	88627459	-	transcript2978.chr2.nnic@EIF2AK3	transcript2978.chr2.nnic	protein_coding	88626967,88613724,88612285,88595469,88593272,88590818,88590443,88588761,88587982,88585841,88583430,88579518,88576554,88574666,88570874,88562289,88558917,88556743	88627459,88613853,88612336,88595663,88593405,88591052,88590605,88588901,88588104,88586061,88583542,88579640,88576703,88575446,88571041,88562390,88558979,88557936	Gene ID= ENSG00000172071.11 TPM= 1.93 Transcript Type= NA
chr2	88691644	88750935	88691644	88750935	+	ENST00000283646.4@RPIA	ENST00000283646.4	protein_coding	88691644,88698484,88700009,88729278,88734552,88735669,88736535,88737977,88749981	88691983,88698544,88700064,88729337,88734616,88735737,88736676,88738076,88750935	Gene ID= ENSG00000153574.8 TPM= 16.41 Transcript Type= protein_coding
chr2	88857166	89040500	88857166	89040500	-	transcript2999.chr2.nnic@AC244205.1	transcript2999.chr2.nnic	processed_transcript	89040486,89027185,88861221,88857166	89040500,89027241,88861252,88857683	Gene ID= ENSG00000240040.6 TPM= 2.58 Transcript Type= NA
chr2	88857166	88947801	88857166	88947801	-	transcript3007.chr2.nnic@IGKV1-5	transcript3007.chr2.nnic	IG_V_gene	88947722,88947300,88861886,88857166	88947801,88947596,88861921,88857683	Gene ID= ENSG00000243466.1 TPM= 3.54 Transcript Type= NA
chr2	88857166	89027717	88857166	89027717	-	transcript3000.chr2.nnic@IGKV3-11	transcript3000.chr2.nnic	IG_V_gene	89027636,89027165,88861221,88857166	89027717,89027466,88861255,88857683	Gene ID= ENSG00000241351.3 TPM= 2.9 Transcript Type= NA
chr2	88857166	89027717	88857166	89027717	-	transcript3003.chr2.nnic@IGKV3-11	transcript3003.chr2.nnic	IG_V_gene	89027636,89027165,88861525,88857166	89027717,89027466,88861556,88857683	Gene ID= ENSG00000241351.3 TPM= 4.83 Transcript Type= NA
chr2	88857166	89085724	88857166	89085724	-	transcript2995.chr2.nnic@IGKV3-15	transcript2995.chr2.nnic	IG_V_gene	89085642,89085178,88860886,88857166	89085724,89085472,88860923,88857683	Gene ID= ENSG00000244437.1 TPM= 3.86 Transcript Type= NA
chr2	88857166	89085724	88857166	89085724	-	transcript3004.chr2.nnic@IGKV3-15	transcript3004.chr2.nnic	IG_V_gene	89085642,89085171,88861525,88857166	89085724,89085472,88861556,88857683	Gene ID= ENSG00000244437.1 TPM= 1.93 Transcript Type= NA
chr2	88857166	89245597	88857166	89245597	-	transcript3009.chr2.nnic@IGKV2-30	transcript3009.chr2.nnic	IG_V_gene	89245518,89244780,88861886,88857166	89245597,89245091,88861921,88857683	Gene ID= ENSG00000243238.1 TPM= 1.93 Transcript Type= NA
chr2	88857166	89268500	88857166	89268500	-	transcript2994.chr2.nnic@IGKV1-33	transcript2994.chr2.nnic	IG_V_gene	89268421,89267995,88860886,88857166	89268500,89268296,88860917,88857683	Gene ID= ENSG00000242076.2 TPM= 2.58 Transcript Type= NA
chr2	89562335	89585608	89562335	89585608	-	ENST00000636560.1@AC006453.2	ENST00000636560.1	lincRNA	89585550,89581006,89580558,89562335	89585608,89581140,89580635,89562684	Gene ID= ENSG00000283196.1 TPM= 1.93 Transcript Type= lincRNA
chr2	95086350	95121804	95086350	95121804	-	transcript3028.chr2.nnic@MRPS5	transcript3028.chr2.nnic	protein_coding	95121734,95117865,95115066,95109916,95108254,95106423,95104640,95101677,95100837,95100474,95090386,95086350	95121804,95117945,95115203,95110041,95108408,95106457,95104730,95101723,95100894,95100536,95090522,95087581	Gene ID= ENSG00000144029.11 TPM= 1.93 Transcript Type= NA
chr2	95087207	95122000	95087207	95122000	-	ENST00000272418.6@MRPS5	ENST00000272418.6	protein_coding	95121734,95117865,95115066,95109916,95108175,95106423,95104640,95101677,95100837,95100474,95090386,95087207	95122000,95117945,95115203,95110041,95108408,95106457,95104730,95101723,95100894,95100536,95090522,95087581	Gene ID= ENSG00000144029.11 TPM= 40.54 Transcript Type= protein_coding
chr2	95098922	95121807	95098922	95121807	-	transcript3038.chr2.nic@MRPS5	transcript3038.chr2.nic	protein_coding	95121734,95117865,95115066,95109916,95108175,95106423,95104640,95100837,95098922	95121807,95117945,95115203,95110041,95108408,95106457,95104730,95101723,95100536	Gene ID= ENSG00000144029.11 TPM= 1.93 Transcript Type= NA
chr2	95164193	95165672	95164193	95165672	-	transcript3042.chr2.nnic@NA	transcript3042.chr2.nnic	NA	95164193	95165672	Gene ID= novel_gene_chr2_3043 TPM= 4.83 Transcript Type= NA
chr2	95402708	95413096	95402708	95413096	+	transcript3051.chr2.nic@FAHD2A	transcript3051.chr2.nic	protein_coding	95402708,95405277,95405553,95406941,95410527,95410864,95412434,95412677,95412895	95402992,95405402,95405803,95407157,95410586,95411026,95412542,95412764,95413096	Gene ID= ENSG00000115042.9 TPM= 5.79 Transcript Type= NA
chr2	95402706	95413096	95402706	95413096	+	transcript3054.chr2.nic@FAHD2A	transcript3054.chr2.nic	protein_coding	95402706,95405553,95406941,95410527,95410864,95412434,95412677,95412895	95402992,95405803,95407157,95410586,95411026,95412542,95412764,95413096	Gene ID= ENSG00000115042.9 TPM= 2.9 Transcript Type= NA
chr2	95402723	95413096	95402723	95413096	+	ENST00000447036.5@FAHD2A	ENST00000447036.5	protein_coding	95402723,95405277,95405553,95406941,95410527,95410864,95412434,95412677,95412895	95402872,95405402,95405803,95407157,95410586,95411026,95412542,95412764,95413096	Gene ID= ENSG00000115042.9 TPM= 18.34 Transcript Type= protein_coding
chr2	96010563	96023382	96010563	96023382	+	transcript3089.chr2.nnic@FAHD2CP	transcript3089.chr2.nnic	transcribed_unprocessed_pseudogene	96010563,96015109,96019201,96021125,96021368,96022674,96022992	96010732,96015325,96019700,96021233,96021465,96022753,96023382	Gene ID= ENSG00000231584.8 TPM= 2.25 Transcript Type= NA
chr2	96010563	96023382	96010563	96023382	+	transcript3091.chr2.nnic@FAHD2CP	transcript3091.chr2.nnic	transcribed_unprocessed_pseudogene	96010563,96015109,96019201,96021125,96021368,96022674	96010732,96015325,96019700,96021233,96021465,96023382	Gene ID= ENSG00000231584.8 TPM= 3.7 Transcript Type= NA
chr2	96010554	96023382	96010554	96023382	+	transcript3093.chr2.nnic@FAHD2CP	transcript3093.chr2.nnic	transcribed_unprocessed_pseudogene	96010554,96019201,96021125,96021368,96022674	96010732,96019700,96021233,96021465,96023382	Gene ID= ENSG00000231584.8 TPM= 5.63 Transcript Type= NA
chr2	96021946	96034915	96021946	96034915	-	ENST00000486463.5@GPAT2	ENST00000486463.5	protein_coding	96034853,96032297,96032033,96031261,96030744,96030406,96027419,96027007,96026697,96026183,96025930,96025485,96024773,96024427,96024189,96023923,96023309,96023106,96022958,96022668,96021946	96034915,96032365,96032146,96031334,96030848,96030534,96028090,96027106,96026909,96026305,96026012,96025603,96024843,96024685,96024337,96024000,96023440,96023226,96023023,96022723,96022275	Gene ID= ENSG00000186281.12 TPM= 4.57 Transcript Type= retained_intron
chr2	96021946	96027688	96021946	96027688	-	transcript3069.chr2.nnic@GPAT2	transcript3069.chr2.nnic	protein_coding	96027419,96027007,96026697,96026183,96025930,96025485,96024773,96024427,96024189,96023923,96023309,96022958,96022668,96021946	96027688,96027106,96026909,96026305,96026012,96025603,96024843,96024685,96024337,96024000,96023440,96023023,96022723,96022275	Gene ID= ENSG00000186281.12 TPM= 3.76 Transcript Type= NA
chr2	96021946	96027688	96021946	96027688	-	transcript3070.chr2.nnic@GPAT2	transcript3070.chr2.nnic	protein_coding	96027419,96026183,96025930,96025485,96024773,96024427,96024189,96023923,96023309,96023106,96022958,96022668,96021946	96027688,96026305,96026012,96025603,96024843,96024667,96024337,96024000,96023440,96023226,96023023,96022723,96022275	Gene ID= ENSG00000186281.12 TPM= 2.64 Transcript Type= NA
chr2	96021946	96027688	96021946	96027688	-	transcript3079.chr2.nnic@GPAT2	transcript3079.chr2.nnic	protein_coding	96027419,96026183,96025930,96025485,96024773,96024427,96024189,96023923,96023309,96022958,96022668,96021946	96027688,96026305,96026012,96025603,96024843,96024685,96024337,96024000,96023440,96023023,96022723,96022275	Gene ID= ENSG00000186281.12 TPM= 3.76 Transcript Type= NA
chr2	96112876	96116555	96112876	96116555	-	transcript3097.chr2.nnic@NA	transcript3097.chr2.nnic	NA	96112876	96116555	Gene ID= novel_gene_chr2_3098 TPM= 5.79 Transcript Type= NA
chr2	96143166	96145440	96143166	96145440	-	ENST00000288943.4@DUSP2	ENST00000288943.4	protein_coding	96144967,96144761,96144154,96143166	96145440,96144882,96144373,96144037	Gene ID= ENSG00000158050.4 TPM= 8.69 Transcript Type= protein_coding
chr2	96184859	96208827	96184859	96208827	-	transcript3109.chr2.nnic@STARD7	transcript3109.chr2.nnic	protein_coding	96208145,96196941,96195341,96194958,96193242,96193078,96192369,96187217,96184859	96208827,96197038,96195549,96195007,96193352,96193160,96192468,96187301,96186914	Gene ID= ENSG00000084090.13 TPM= 23.55 Transcript Type= NA
chr2	96184859	96208829	96184859	96208829	-	transcript3113.chr2.nic@STARD7	transcript3113.chr2.nic	protein_coding	96208539,96195341,96194958,96193242,96193078,96192369,96187217,96184859	96208829,96195549,96195007,96193352,96193160,96192468,96187301,96186914	Gene ID= ENSG00000084090.13 TPM= 25.48 Transcript Type= NA
chr2	96184859	96208818	96184859	96208818	-	ENST00000337288.9@STARD7	ENST00000337288.9	protein_coding	96208145,96195341,96194958,96193242,96193078,96192369,96187217,96184859	96208818,96195549,96195007,96193352,96193160,96192468,96187301,96186914	Gene ID= ENSG00000084090.13 TPM= 551.58 Transcript Type= protein_coding
chr2	96208388	96243395	96208388	96243395	+	transcript3120.chr2.nnic@STARD7-AS1	transcript3120.chr2.nnic	processed_transcript	96208388,96237905,96239713,96241877	96208979,96238099,96240688,96243395	Gene ID= ENSG00000204685.6 TPM= 2.9 Transcript Type= NA
chr2	96251660	96265994	96251660	96265994	-	ENST00000432959.1@TMEM127	ENST00000432959.1	protein_coding	96265869,96265138,96254833,96251660	96265994,96265489,96254997,96254115	Gene ID= ENSG00000135956.8 TPM= 25.1 Transcript Type= protein_coding
chr2	96266132	96271645	96266132	96271645	+	ENST00000488633.1@CIAO1	ENST00000488633.1	protein_coding	96266132,96267321,96267625,96267836,96268457,96269268,96271111	96266489,96267469,96267736,96267924,96268658,96269355,96271645	Gene ID= ENSG00000144021.2 TPM= 6.11 Transcript Type= protein_coding
chr2	96266159	96273686	96266159	96273686	+	transcript3157.chr2.nic@CIAO1	transcript3157.chr2.nic	protein_coding	96266159,96267321,96267625,96267836,96268457,96271111	96266489,96267469,96267736,96267924,96269355,96273686	Gene ID= ENSG00000144021.2 TPM= 7.56 Transcript Type= NA
chr2	96274336	96305515	96274336	96305515	-	ENST00000323853.9@SNRNP200	ENST00000323853.9	protein_coding	96305393,96304705,96303159,96301524,96300998,96299329,96298815,96298603,96298284,96297637,96297363,96296933,96296536,96295488,96293316,96292972,96291751,96291392,96290684,96290326,96289799,96289227,96289037,96288663,96287863,96287439,96287006,96286688,96286311,96285180,96284358,96283813,96283535,96283201,96281814,96279451,96278809,96278547,96278237,96277807,96277539,96277081,96276904,96275257,96274336	96305515,96304868,96303330,96301716,96301053,96299427,96298967,96298702,96298420,96297720,96297536,96297070,96296691,96295658,96293509,96293095,96291900,96291502,96290815,96290514,96289996,96289379,96289117,96288746,96287969,96287557,96287160,96286877,96286484,96285340,96284585,96284004,96283713,96283352,96281922,96279559,96278998,96278711,96278358,96277950,96277715,96277241,96276985,96275349,96275155	Gene ID= ENSG00000144028.14 TPM= 42.47 Transcript Type= protein_coding
chr2	96536696	96552630	96536696	96552630	+	transcript3172.chr2.nnic@ARID5A	transcript3172.chr2.nnic	protein_coding	96536696,96547402,96549321,96549753,96550188,96550574,96551099,96551733	96536830,96547517,96549459,96549805,96550285,96550733,96551326,96552630	Gene ID= ENSG00000196843.15 TPM= 5.31 Transcript Type= NA
chr2	96536696	96552630	96536696	96552630	+	transcript3173.chr2.nnic@ARID5A	transcript3173.chr2.nnic	protein_coding	96536696,96547402,96549321,96549753,96550029,96550574,96551099	96536830,96547517,96549459,96549805,96550285,96550733,96552630	Gene ID= ENSG00000196843.15 TPM= 3.96 Transcript Type= NA
chr2	96536752	96552630	96536752	96552630	+	transcript3177.chr2.nic@ARID5A	transcript3177.chr2.nic	protein_coding	96536752,96547402,96549321,96549753,96550574,96551099	96536830,96547517,96549459,96550285,96550733,96552630	Gene ID= ENSG00000196843.15 TPM= 5.89 Transcript Type= NA
chr2	96536696	96552630	96536696	96552630	+	transcript3178.chr2.nnic@ARID5A	transcript3178.chr2.nnic	protein_coding	96536696,96547402,96549753,96550029,96550574,96551099	96536830,96547517,96549805,96550285,96550733,96552630	Gene ID= ENSG00000196843.15 TPM= 5.89 Transcript Type= NA
chr2	96536749	96552638	96536749	96552638	+	ENST00000357485.7@ARID5A	ENST00000357485.7	protein_coding	96536749,96547402,96549321,96549753,96550188,96550574,96551099	96536830,96547517,96549459,96549805,96550285,96550733,96552638	Gene ID= ENSG00000196843.15 TPM= 21.33 Transcript Type= protein_coding
chr2	96536752	96552630	96536752	96552630	+	ENST00000412735.5@ARID5A	ENST00000412735.5	protein_coding	96536752,96547402,96549753,96550188,96550574,96551099	96536830,96547517,96549805,96550285,96550733,96552630	Gene ID= ENSG00000196843.15 TPM= 16.51 Transcript Type= nonsense_mediated_decay
chr2	96593174	96638331	96593174	96638331	-	ENST00000420155.5@KANSL3	ENST00000420155.5	protein_coding	96638283,96636921,96631312,96619672,96619359,96613488,96612818,96612462,96612282,96611064,96610726,96609499,96608864,96608508,96606970,96605320,96604779,96604250,96602753,96601643,96593174	96638331,96637185,96631482,96619762,96619544,96613619,96612934,96612563,96612353,96611138,96610883,96609562,96609064,96608664,96607047,96605511,96604863,96604380,96602862,96601776,96595631	Gene ID= ENSG00000114982.17 TPM= 21.24 Transcript Type= nonsense_mediated_decay
chr2	96631282	96636005	96631282	96636005	+	transcript3193.chr2.nnic@NA	transcript3193.chr2.nnic	NA	96631282	96636005	Gene ID= novel_gene_chr2_3194 TPM= 2.9 Transcript Type= NA
chr2	96705929	96740063	96705929	96740063	-	ENST00000264963.8@LMAN2L	ENST00000264963.8	protein_coding	96739854,96737949,96734409,96733519,96711864,96711656,96707714,96705929	96740063,96738067,96734526,96733601,96712025,96711770,96707833,96707398	Gene ID= ENSG00000114988.11 TPM= 38.13 Transcript Type= protein_coding
chr2	96705929	96740082	96705929	96740082	-	transcript3199.chr2.nic@LMAN2L	transcript3199.chr2.nic	protein_coding	96739854,96737949,96737137,96734409,96711864,96711656,96707714,96705929	96740082,96738067,96737217,96734526,96712025,96711770,96707833,96707398	Gene ID= ENSG00000114988.11 TPM= 3.38 Transcript Type= NA
chr2	96705975	96740041	96705975	96740041	-	ENST00000434524.5@LMAN2L	ENST00000434524.5	protein_coding	96739854,96737949,96737137,96734409,96733519,96711864,96711656,96707714,96705975	96740041,96738067,96737217,96734526,96733601,96712025,96711770,96707833,96707398	Gene ID= ENSG00000114988.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr2	96816238	96833567	96816238	96833567	+	transcript3259.chr2.nic@CNNM3	transcript3259.chr2.nic	protein_coding	96816238,96825058,96826833,96827731,96828099,96828567,96828996,96831969,96832552	96817502,96825201,96826982,96827900,96828195,96828700,96829134,96832068,96833567	Gene ID= ENSG00000168763.15 TPM= 6.76 Transcript Type= NA
chr2	96837915	96844022	96837915	96844022	-	transcript3285.chr2.nnic@ANKRD23	transcript3285.chr2.nnic	protein_coding	96843966,96842365,96842060,96840773,96840416,96840232,96839997,96839727,96837915	96844022,96842511,96842185,96840912,96840514,96840330,96840095,96839825,96839644	Gene ID= ENSG00000163126.14 TPM= 120.58 Transcript Type= NA
chr2	96837912	96844034	96837912	96844034	-	ENST00000318357.8@ANKRD23	ENST00000318357.8	protein_coding	96843966,96842365,96842060,96840787,96840416,96840232,96839997,96839727,96837912	96844034,96842511,96842185,96840912,96840514,96840330,96840095,96839825,96839644	Gene ID= ENSG00000163126.14 TPM= 1469.32 Transcript Type= protein_coding
chr2	96837915	96844024	96837915	96844024	-	transcript3290.chr2.nic@ANKRD23	transcript3290.chr2.nic	protein_coding	96843966,96842365,96842060,96840827,96840416,96840232,96839997,96839727,96837915	96844024,96842511,96842185,96840912,96840514,96840330,96840095,96839825,96839644	Gene ID= ENSG00000163126.14 TPM= 88.4 Transcript Type= NA
chr2	96837914	96844005	96837914	96844005	-	ENST00000418232.5@ANKRD23	ENST00000418232.5	protein_coding	96843966,96842365,96842060,96840787,96840416,96840232,96839997,96839727,96838499,96837914	96844005,96842511,96842185,96840912,96840514,96840330,96840095,96839825,96839644,96838088	Gene ID= ENSG00000163126.14 TPM= 271.27 Transcript Type= protein_coding
chr2	96837915	96844021	96837915	96844021	-	ENST00000331001.2@ANKRD23	ENST00000331001.2	protein_coding	96843966,96842365,96842060,96840416,96840232,96839997,96839727,96837915	96844021,96842511,96842185,96840514,96840330,96840095,96839825,96839644	Gene ID= ENSG00000163126.14 TPM= 71.03 Transcript Type= protein_coding
chr2	96847985	96858095	96847985	96858095	-	ENST00000393537.4@ANKRD39	ENST00000393537.4	protein_coding	96857888,96854338,96853401,96847985	96858095,96854441,96853604,96848444	Gene ID= ENSG00000213337.8 TPM= 20.27 Transcript Type= protein_coding
chr2	97083583	97094869	97083583	97094869	-	transcript3382.chr2.nnic@FAHD2B	transcript3382.chr2.nnic	protein_coding	97094582,97091863,97091462,97090109,97086139,97085699,97084169,97083948,97083583	97094869,97091988,97091712,97090325,97086198,97085861,97084277,97084035,97083817	Gene ID= ENSG00000144199.11 TPM= 1.93 Transcript Type= NA
chr2	97083583	97094882	97083583	97094882	-	ENST00000272610.3@FAHD2B	ENST00000272610.3	protein_coding	97094701,97091462,97090109,97086139,97085699,97084169,97083948,97083583	97094882,97091712,97090325,97086198,97085861,97084277,97084035,97083817	Gene ID= ENSG00000144199.11 TPM= 10.62 Transcript Type= protein_coding
chr2	97083586	97094897	97083586	97094897	-	transcript3387.chr2.nic@FAHD2B	transcript3387.chr2.nic	protein_coding	97094701,97091863,97091462,97090109,97085699,97083586	97094897,97091988,97091712,97090325,97086198,97084277	Gene ID= ENSG00000144199.11 TPM= 1.93 Transcript Type= NA
chr2	97083583	97094839	97083583	97094839	-	ENST00000414820.5@FAHD2B	ENST00000414820.5	protein_coding	97094701,97091863,97091462,97090109,97086139,97085699,97084169,97083948,97083583	97094839,97091988,97091712,97090325,97086198,97085861,97084277,97084035,97083817	Gene ID= ENSG00000144199.11 TPM= 22.2 Transcript Type= protein_coding
chr2	97646040	97648383	97646040	97648383	+	ENST00000258424.2@COX5B	ENST00000258424.2	protein_coding	97646040,97647067,97647344,97647996	97646189,97647140,97647443,97648383	Gene ID= ENSG00000135940.6 TPM= 3.86 Transcript Type= protein_coding
chr2	97655963	97664107	97655963	97664107	-	ENST00000289228.6@ACTR1B	ENST00000289228.6	protein_coding	97663843,97661882,97660571,97659352,97658879,97658427,97658224,97657943,97657448,97657152,97655963	97664107,97661946,97660646,97659477,97659003,97658643,97658316,97658117,97657509,97657192,97656960	Gene ID= ENSG00000115073.7 TPM= 44.4 Transcript Type= protein_coding
chr2	97756340	97995891	97756340	97995891	-	ENST00000186436.9@TMEM131	ENST00000186436.9	protein_coding	97995476,97927426,97908658,97888052,97859304,97844145,97841815,97837077,97834775,97834621,97833365,97818613,97815199,97814235,97813971,97812639,97812421,97811128,97809688,97805551,97805376,97805088,97802652,97802428,97801895,97797365,97796844,97796218,97794930,97793395,97792386,97775843,97772297,97766478,97766114,97762035,97760793,97760593,97759652,97758893,97756340	97995891,97927487,97908698,97888120,97859427,97844261,97841937,97837157,97834925,97834677,97833426,97818721,97815307,97814388,97814141,97812749,97812555,97811232,97809774,97805703,97805451,97805205,97802790,97802537,97801961,97797516,97796986,97796404,97795115,97793553,97792984,97776018,97772424,97766602,97766263,97762200,97760914,97760689,97759749,97759053,97757383	Gene ID= ENSG00000075568.16 TPM= 3.86 Transcript Type= protein_coding
chr2	97797142	97800606	97797142	97800606	+	transcript3412.chr2.nnic@NA	transcript3412.chr2.nnic	NA	97797142	97800606	Gene ID= novel_gene_chr2_3413 TPM= 1.93 Transcript Type= NA
chr2	98444874	98582226	98444874	98582226	+	transcript3419.chr2.nnic@INPP4A	transcript3419.chr2.nnic	protein_coding	98444874,98518964,98519946,98520687,98533377,98535729,98536129,98537863,98538891,98539528,98543877,98545969,98546586,98548952,98552786,98554271,98555553,98559463,98563465,98564640,98565640,98566029,98568571,98572815,98576989,98581576	98445085,98519025,98520154,98520731,98533495,98535845,98536208,98537974,98538981,98539675,98544007,98546073,98546694,98548969,98552969,98554489,98555808,98559495,98563637,98564763,98565766,98566169,98568668,98572927,98577143,98582226	Gene ID= ENSG00000040933.15 TPM= 2.9 Transcript Type= NA
chr2	98600473	98608512	98600473	98608512	-	transcript3431.chr2.nnic@COA5	transcript3431.chr2.nnic	protein_coding	98608197,98604108,98600473	98608512,98604191,98600793	Gene ID= ENSG00000183513.8 TPM= 2.9 Transcript Type= NA
chr2	98608578	98618515	98608578	98618515	+	transcript3446.chr2.nnic@UNC50	transcript3446.chr2.nnic	protein_coding	98608578,98609643,98610775,98616207,98616432,98618168	98608726,98610039,98610895,98616346,98616533,98618515	Gene ID= ENSG00000115446.11 TPM= 5.31 Transcript Type= NA
chr2	98608558	98618515	98608558	98618515	+	transcript3451.chr2.nnic@UNC50	transcript3451.chr2.nnic	protein_coding	98608558,98609756,98610775,98616432,98618168	98608726,98610039,98610895,98616533,98618515	Gene ID= ENSG00000115446.11 TPM= 6.76 Transcript Type= NA
chr2	98608558	98613285	98608558	98613285	+	transcript3455.chr2.nnic@UNC50	transcript3455.chr2.nnic	protein_coding	98608558,98609756,98610775,98612431	98608726,98610039,98610895,98613285	Gene ID= ENSG00000115446.11 TPM= 2.9 Transcript Type= NA
chr2	98608558	98618510	98608558	98618510	+	transcript3456.chr2.nnic@UNC50	transcript3456.chr2.nnic	protein_coding	98608558,98609756,98610775,98618168	98608726,98610039,98610895,98618510	Gene ID= ENSG00000115446.11 TPM= 1.93 Transcript Type= NA
chr2	98608579	98618515	98608579	98618515	+	ENST00000357765.6@UNC50	ENST00000357765.6	protein_coding	98608579,98609756,98610775,98616207,98616432,98618168	98608726,98610039,98610895,98616346,98616533,98618515	Gene ID= ENSG00000115446.11 TPM= 31.37 Transcript Type= protein_coding
chr2	98608579	98618515	98608579	98618515	+	ENST00000409975.5@UNC50	ENST00000409975.5	protein_coding	98608579,98610775,98616207,98616432,98618168	98610039,98610895,98616346,98616533,98618515	Gene ID= ENSG00000115446.11 TPM= 3.86 Transcript Type= protein_coding
chr2	98793846	98936259	98793846	98936259	-	ENST00000397899.6@KIAA1211L	ENST00000397899.6	protein_coding	98935938,98846731,98838119,98832862,98832348,98826975,98821857,98797350,98796120,98793846	98936259,98846810,98838287,98832997,98832512,98827169,98823537,98797537,98796264,98794671	Gene ID= ENSG00000196872.11 TPM= 16.41 Transcript Type= protein_coding
chr2	99154955	99163157	99154955	99163157	+	ENST00000393473.6@LIPT1	ENST00000393473.6	protein_coding	99154955,99156301,99161957	99155051,99156426,99163157	Gene ID= ENSG00000144182.16 TPM= 5.79 Transcript Type= protein_coding
chr2	99161427	99181061	99161427	99181061	-	transcript3465.chr2.nic@MITD1	transcript3465.chr2.nic	protein_coding	99180831,99173915,99171510,99171343,99170537,99169550,99161427	99181061,99174016,99171646,99171429,99170652,99169610,99161668	Gene ID= ENSG00000158411.11 TPM= 1.93 Transcript Type= NA
chr2	99169263	99181058	99169263	99181058	-	ENST00000289359.6@MITD1	ENST00000289359.6	protein_coding	99180831,99173915,99171510,99171343,99170537,99169550,99169263	99181058,99174016,99171646,99171429,99170652,99169610,99169470	Gene ID= ENSG00000158411.11 TPM= 2.9 Transcript Type= protein_coding
chr2	99181079	99197626	99181079	99197626	+	ENST00000338148.7@MRPL30	ENST00000338148.7	protein_coding	99181079,99186177,99188177,99194751,99195116,99195573	99181249,99186254,99188257,99194897,99195189,99197626	Gene ID= ENSG00000185414.19 TPM= 9.65 Transcript Type= protein_coding
chr2	99181186	99195298	99181186	99195298	+	transcript3474.chr2.nic@MRPL30	transcript3474.chr2.nic	protein_coding	99181186,99186177,99188177,99194751,99195116	99181249,99186254,99188257,99194897,99195298	Gene ID= ENSG00000185414.19 TPM= 1.93 Transcript Type= NA
chr2	99284238	99336320	99284238	99336320	-	transcript3481.chr2.nnic@LYG1	transcript3481.chr2.nnic	protein_coding	99336239,99333022,99327535,99321955,99301050,99298459,99295628,99291237,99284688,99284238	99336320,99333242,99327653,99322209,99301140,99298549,99295702,99292640,99284820,99284511	Gene ID= ENSG00000144214.9 TPM= 1.93 Transcript Type= NA
chr2	99318982	99336462	99318982	99336462	-	ENST00000264255.7@TXNDC9	ENST00000264255.7	protein_coding	99336239,99333022,99327535,99321955,99318982	99336462,99333242,99327653,99322209,99319799	Gene ID= ENSG00000115514.11 TPM= 27.99 Transcript Type= protein_coding
chr2	99337332	99363863	99337332	99363863	+	transcript3524.chr2.nic@EIF5B	transcript3524.chr2.nic	protein_coding	99337332,99360236,99360465,99361148,99363645	99337589,99360361,99360549,99361820,99363863	Gene ID= ENSG00000158417.10 TPM= 1.93 Transcript Type= NA
chr2	99400475	99490035	99400475	99490035	-	ENST00000258428.7@REV1	ENST00000258428.7	protein_coding	99489817,99464922,99462496,99449336,99442317,99438601,99435834,99434332,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99402889,99402644,99402244,99400475	99490035,99464985,99462622,99449504,99442469,99439310,99435941,99434448,99429948,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106,99402800,99402346,99401352	Gene ID= ENSG00000135945.9 TPM= 3.86 Transcript Type= protein_coding
chr2	99403056	99490047	99403056	99490047	-	transcript3511.chr2.nnic@REV1	transcript3511.chr2.nnic	protein_coding	99489817,99449336,99442317,99438601,99435834,99434332,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99403056	99490047,99449504,99442469,99439310,99435941,99434448,99429948,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106	Gene ID= ENSG00000135945.9 TPM= 3.86 Transcript Type= NA
chr2	99437531	99490032	99437531	99490032	-	transcript3518.chr2.nic@REV1	transcript3518.chr2.nic	protein_coding	99489817,99464922,99462496,99449336,99442317,99437531	99490032,99464985,99462622,99449504,99442469,99439310	Gene ID= ENSG00000135945.9 TPM= 1.93 Transcript Type= NA
chr2	100273448	100280501	100273448	100280501	-	transcript3534.chr2.nnic@NA	transcript3534.chr2.nnic	NA	100273448	100280501	Gene ID= novel_gene_chr2_3535 TPM= 6.76 Transcript Type= NA
chr2	100281886	100322212	100281886	100322212	-	transcript3536.chr2.nnic@LONRF2	transcript3536.chr2.nnic	protein_coding	100321415,100309107,100302921,100300644,100299717,100299226,100298836,100295432,100294229,100290258,100286914,100282850,100281886	100322212,100309225,100303043,100300787,100299918,100299319,100298950,100295553,100294387,100290420,100287063,100284492,100282800	Gene ID= ENSG00000170500.12 TPM= 2.41 Transcript Type= NA
chr2	100273291	100322733	100273291	100322733	-	ENST00000393437.7@LONRF2	ENST00000393437.7	protein_coding	100321415,100309107,100302921,100300644,100299717,100299226,100298836,100295432,100294229,100290258,100286914,100273291	100322733,100309225,100303043,100300787,100299918,100299319,100298950,100295553,100294387,100290420,100287063,100284492	Gene ID= ENSG00000170500.12 TPM= 2.41 Transcript Type= protein_coding
chr2	100391860	100417656	100391860	100417656	-	ENST00000264249.7@CHST10	ENST00000264249.7	protein_coding	100417374,100415041,100406576,100402564,100397908,100395509,100391860	100417656,100415111,100406707,100402655,100398142,100395614,100393782	Gene ID= ENSG00000115526.10 TPM= 14.48 Transcript Type= protein_coding
chr2	100562690	100576735	100562690	100576735	+	ENST00000264254.10@PDCL3	ENST00000264254.10	protein_coding	100562690,100566503,100568931,100569578,100571590,100576354	100563073,100566629,100569021,100569721,100571798,100576735	Gene ID= ENSG00000115539.13 TPM= 79.64 Transcript Type= protein_coding
chr2	100820127	100936156	100820127	100936156	+	transcript3554.chr2.nnic@NPAS2	transcript3554.chr2.nnic	protein_coding	100820127,100904733,100925146,100932910,100934860	100820414,100904786,100925294,100933001,100936156	Gene ID= ENSG00000170485.16 TPM= 2.9 Transcript Type= NA
chr2	100820152	100996829	100820152	100996829	+	ENST00000335681.9@NPAS2	ENST00000335681.9	protein_coding	100820152,100904733,100925146,100932910,100937753,100948235,100949367,100964058,100964861,100965660,100968281,100970990,100974803,100975458,100977710,100982231,100988079,100990256,100990780,100993347,100995400	100820414,100904786,100925294,100933001,100937842,100948355,100949480,100964176,100964943,100965766,100968428,100971074,100974944,100975567,100977799,100982377,100988276,100990446,100990872,100993527,100996829	Gene ID= ENSG00000170485.16 TPM= 9.65 Transcript Type= protein_coding
chr2	101001715	101007267	101001715	101007267	+	ENST00000264258.7@RPL31	ENST00000264258.7	protein_coding	101001715,101002702,101004158,101005959,101006350	101002315,101002808,101004283,101006071,101007267	Gene ID= ENSG00000071082.10 TPM= 245.19 Transcript Type= protein_coding
chr2	101002293	101006418	101002293	101006418	+	ENST00000409320.7@RPL31	ENST00000409320.7	protein_coding	101002293,101002702,101004158,101005959	101002315,101002808,101004283,101006418	Gene ID= ENSG00000071082.10 TPM= 2.9 Transcript Type= protein_coding
chr2	101252802	101270316	101252802	101270316	+	ENST00000289382.7@CNOT11	ENST00000289382.7	protein_coding	101252802,101257791,101262539,101264845,101266677,101269040,101269216	101253478,101257955,101262691,101265047,101266879,101269136,101270316	Gene ID= ENSG00000158435.7 TPM= 78.51 Transcript Type= protein_coding
chr2	101252887	101270316	101252887	101270316	+	transcript3613.chr2.nnic@CNOT11	transcript3613.chr2.nnic	protein_coding	101252887,101257838,101262539,101264845,101266677,101269040,101269216	101253478,101257955,101262691,101265047,101266879,101269136,101270316	Gene ID= ENSG00000158435.7 TPM= 7.08 Transcript Type= NA
chr2	101252886	101270316	101252886	101270316	+	transcript3615.chr2.nnic@CNOT11	transcript3615.chr2.nnic	protein_coding	101252886,101262539,101264845,101266677,101269040,101269216	101253478,101262691,101265047,101266879,101269136,101270316	Gene ID= ENSG00000158435.7 TPM= 6.11 Transcript Type= NA
chr2	101271223	101308695	101271223	101308695	-	transcript3619.chr2.nnic@RNF149	transcript3619.chr2.nnic	protein_coding	101308129,101294931,101294014,101288973,101286081,101281859,101275740,101271223	101308695,101295181,101294082,101289055,101286177,101282057,101277281,101271389	Gene ID= ENSG00000163162.8 TPM= 1.93 Transcript Type= NA
chr2	101276537	101308705	101276537	101308705	-	transcript3628.chr2.nnic@RNF149	transcript3628.chr2.nnic	protein_coding	101308129,101294931,101294014,101288973,101281859,101276537	101308705,101295181,101294082,101289055,101282057,101277281	Gene ID= ENSG00000163162.8 TPM= 1.93 Transcript Type= NA
chr2	101288231	101308701	101288231	101308701	-	transcript3631.chr2.nic@RNF149	transcript3631.chr2.nic	protein_coding	101308129,101294931,101294014,101288231	101308701,101295181,101294082,101289055	Gene ID= ENSG00000163162.8 TPM= 4.83 Transcript Type= NA
chr2	101271222	101308701	101271222	101308701	-	ENST00000424632.5@RNF149	ENST00000424632.5	protein_coding	101308129,101294931,101294014,101288973,101286081,101281859,101273127,101271222	101308701,101295181,101294082,101289055,101286177,101282057,101273341,101271744	Gene ID= ENSG00000163162.8 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr2	101276091	101308696	101276091	101308696	-	ENST00000295317.3@RNF149	ENST00000295317.3	protein_coding	101308129,101294931,101294014,101288973,101286081,101281859,101276091	101308696,101295181,101294082,101289055,101286177,101282057,101277281	Gene ID= ENSG00000163162.8 TPM= 2.9 Transcript Type= protein_coding
chr2	101697683	101891496	101697683	101891496	+	transcript3641.chr2.nic@MAP4K4	transcript3641.chr2.nic	protein_coding	101697683,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101864930,101866428,101867212,101869622,101870295,101871494,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101871685,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 7.75 Transcript Type= NA
chr2	101697688	101891496	101697688	101891496	+	transcript3644.chr2.nic@MAP4K4	transcript3644.chr2.nic	protein_coding	101697688,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859736,101864930,101866428,101867212,101869622,101870295,101871494,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101871685,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 7.75 Transcript Type= NA
chr2	101697688	101891496	101697688	101891496	+	transcript3646.chr2.nic@MAP4K4	transcript3646.chr2.nic	protein_coding	101697688,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101864930,101866428,101867212,101869622,101870295,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 5.82 Transcript Type= NA
chr2	101697688	101856039	101697688	101856039	+	transcript3661.chr2.nnic@MAP4K4	transcript3661.chr2.nnic	protein_coding	101697688,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101839819,101842609,101844101,101855977	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101839994,101842681,101844311,101856039	Gene ID= ENSG00000071054.16 TPM= 2.12 Transcript Type= NA
chr2	102142748	102179871	102142748	102179871	+	transcript3670.chr2.nnic@IL1R1	transcript3670.chr2.nnic	protein_coding	102142748,102153941,102157719,102164774,102165115,102166113,102168598,102171801,102172687,102174587,102175571,102176353,102178031	102143020,102154017,102157785,102165008,102165304,102166281,102168663,102171918,102172838,102174730,102175645,102176648,102179871	Gene ID= ENSG00000115594.11 TPM= 1.93 Transcript Type= NA
chr2	102070432	102175817	102070432	102175817	+	transcript3672.chr2.nnic@IL1R1	transcript3672.chr2.nnic	protein_coding	102070432,102101264,102153941,102157719,102164774,102165115,102166113,102168598,102171801,102172687,102174587,102175478	102070533,102101361,102154017,102157785,102165008,102165304,102166281,102168663,102171918,102172838,102174730,102175817	Gene ID= ENSG00000115594.11 TPM= 1.93 Transcript Type= NA
chr2	102172032	102179874	102172032	102179874	+	transcript3679.chr2.nic@IL1R1	transcript3679.chr2.nic	protein_coding	102172032,102174587,102175478,102176353	102172838,102174730,102175645,102179874	Gene ID= ENSG00000115594.11 TPM= 3.38 Transcript Type= NA
chr2	102142786	102179874	102142786	102179874	+	ENST00000410023.5@IL1R1	ENST00000410023.5	protein_coding	102142786,102153941,102157719,102164774,102165115,102166113,102168598,102171801,102172687,102174587,102175478,102176353	102143020,102154017,102157785,102165008,102165304,102166281,102168663,102171918,102172838,102174730,102175645,102179874	Gene ID= ENSG00000115594.11 TPM= 7.24 Transcript Type= protein_coding
chr2	102337148	102346100	102337148	102346100	+	ENST00000311734.6@IL1RL1	ENST00000311734.6	protein_coding	102337148,102338116,102338837,102340098,102340666,102342223,102343036,102343270	102337337,102338325,102339047,102340272,102340828,102342294,102343177,102346100	Gene ID= ENSG00000115602.16 TPM= 4.83 Transcript Type= protein_coding
chr2	102717692	102736888	102717692	102736888	-	transcript3697.chr2.nic@MFSD9	transcript3697.chr2.nic	protein_coding	102736646,102732322,102731025,102726845,102723700,102717692	102736888,102732409,102731068,102726974,102723878,102719207	Gene ID= ENSG00000135953.10 TPM= 1.93 Transcript Type= NA
chr2	102762013	102817666	102762013	102817666	+	ENST00000412401.2@TMEM182	ENST00000412401.2	protein_coding	102762013,102762587,102764329,102797863,102814748	102762349,102762686,102764427,102798000,102817666	Gene ID= ENSG00000170417.15 TPM= 12.55 Transcript Type= protein_coding
chr2	105037983	105099960	105037983	105099960	+	ENST00000258455.7@MRPS9	ENST00000258455.7	protein_coding	105037983,105049171,105071313,105071459,105079983,105088984,105089920,105092401,105093530,105097155,105099670	105038227,105049350,105071375,105071489,105080062,105089069,105089995,105092569,105093638,105097324,105099960	Gene ID= ENSG00000135972.8 TPM= 119.7 Transcript Type= protein_coding
chr2	105267072	105330023	105267072	105330023	-	transcript3716.chr2.nnic@TGFBRAP1	transcript3716.chr2.nnic	protein_coding	105329625,105307614,105298511,105296356,105284316,105280382,105277614,105275560,105273544,105272855,105269272,105267217,105267072	105330023,105308318,105298705,105296510,105284398,105280723,105277671,105275703,105273690,105273014,105269705,105267559,105267188	Gene ID= ENSG00000135966.12 TPM= 8.37 Transcript Type= NA
chr2	105264414	105330034	105264414	105330034	-	ENST00000393359.6@TGFBRAP1	ENST00000393359.6	protein_coding	105329625,105307614,105298511,105296356,105284316,105280382,105277614,105275560,105273544,105272855,105269272,105264414	105330034,105308318,105298705,105296510,105284398,105280723,105277671,105275703,105273690,105273014,105269705,105267559	Gene ID= ENSG00000135966.12 TPM= 9.33 Transcript Type= protein_coding
chr2	105337359	105349211	105337359	105349211	+	ENST00000258457.6@C2orf49	ENST00000258457.6	protein_coding	105337359,105339583,105342848,105345315	105337686,105339749,105343223,105349211	Gene ID= ENSG00000135974.9 TPM= 7.72 Transcript Type= protein_coding
chr2	105360812	105399224	105360812	105399224	-	ENST00000344213.8@FHL2	ENST00000344213.8	protein_coding	105398842,105396647,105386361,105373559,105367570,105363285,105360812	105399224,105396697,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 13.83 Transcript Type= protein_coding
chr2	105360828	105399061	105360828	105399061	-	ENST00000322142.12@FHL2	ENST00000322142.12	protein_coding	105398970,105396647,105386361,105373559,105367570,105363285,105360828	105399061,105396697,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 15.28 Transcript Type= protein_coding
chr2	105360826	105399051	105360826	105399051	-	ENST00000393353.7@FHL2	ENST00000393353.7	protein_coding	105398842,105386361,105373559,105367570,105363285,105360826	105399051,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 10.45 Transcript Type= protein_coding
chr2	105360861	105399050	105360861	105399050	-	ENST00000408995.5@FHL2	ENST00000408995.5	protein_coding	105398970,105386361,105373559,105367570,105363285,105360861	105399050,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 12.55 Transcript Type= protein_coding
chr2	105744897	105894274	105744897	105894274	+	ENST00000233154.8@NCK2	ENST00000233154.8	protein_coding	105744897,105816430,105855048,105881328,105892982	105745138,105816613,105855289,105882049,105894274	Gene ID= ENSG00000071051.13 TPM= 193.06 Transcript Type= protein_coding
chr2	106093303	106194339	106093303	106194339	-	ENST00000283148.11@UXS1	ENST00000283148.11	protein_coding	106194148,106166056,106164736,106163667,106158058,106145190,106129674,106125620,106122970,106112646,106104794,106101058,106098716,106096718,106093303	106194339,106166083,106164799,106163710,106158118,106145370,106129778,106125679,106123091,106112765,106104837,106101118,106098773,106096821,106094157	Gene ID= ENSG00000115652.14 TPM= 15.44 Transcript Type= protein_coding
chr2	108448561	108509398	108448561	108509398	+	ENST00000309863.10@GCC2	ENST00000309863.10	protein_coding	108448561,108449633,108451028,108452399,108468980,108469651,108472827,108475535,108475752,108481697,108482287,108483062,108484149,108485636,108485831,108486511,108487699,108489838,108492573,108495291,108496970,108499553,108507560	108449280,108449689,108451112,108452466,108469084,108472116,108472899,108475635,108475850,108481816,108482451,108483166,108484311,108485736,108485908,108486648,108487820,108490014,108492790,108495485,108497109,108499754,108509398	Gene ID= ENSG00000135968.20 TPM= 1.93 Transcript Type= protein_coding
chr2	108534398	108684445	108534398	108684445	+	transcript3776.chr2.nnic@LIMS1	transcript3776.chr2.nnic	protein_coding	108534398,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108680969,108683885	108534594,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108681160,108684445	Gene ID= ENSG00000169756.16 TPM= 15.93 Transcript Type= NA
chr2	108655005	108684445	108655005	108684445	+	transcript3781.chr2.nnic@LIMS1	transcript3781.chr2.nnic	protein_coding	108655005,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108680969,108683885	108655256,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108681104,108684445	Gene ID= ENSG00000169756.16 TPM= 1.93 Transcript Type= NA
chr2	108655005	108686624	108655005	108686624	+	transcript3785.chr2.nnic@LIMS1	transcript3785.chr2.nnic	protein_coding	108655005,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108680969,108683885	108655256,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108681160,108686624	Gene ID= ENSG00000169756.16 TPM= 6.27 Transcript Type= NA
chr2	108534355	108687238	108534355	108687238	+	ENST00000544547.5@LIMS1	ENST00000544547.5	protein_coding	108534355,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108683885	108534594,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108687238	Gene ID= ENSG00000169756.16 TPM= 17.86 Transcript Type= protein_coding
chr2	108719481	108785811	108719481	108785811	+	ENST00000283195.10@RANBP2	ENST00000283195.10	protein_coding	108719481,108729132,108730774,108731322,108735532,108736104,108740489,108746711,108748920,108751264,108751528,108751871,108752998,108753426,108753825,108754905,108755176,108758413,108762101,108763237,108771701,108772489,108772868,108775732,108777130,108781269,108782128,108782528,108783596	108719678,108729199,108730885,108731474,108735762,108736249,108740681,108746798,108749129,108751445,108751703,108751994,108753159,108753563,108753971,108755084,108755259,108758548,108762195,108768388,108771871,108772581,108773046,108775936,108777231,108781429,108782401,108782862,108785811	Gene ID= ENSG00000153201.15 TPM= 14.48 Transcript Type= protein_coding
chr2	109127332	109130088	109127332	109130088	-	transcript3809.chr2.nnic@NA	transcript3809.chr2.nnic	NA	109127332	109130088	Gene ID= novel_gene_chr2_3810 TPM= 13.51 Transcript Type= NA
chr2	109436653	109504632	109436653	109504632	+	transcript3804.chr2.nic@SH3RF3	transcript3804.chr2.nic	protein_coding	109436653,109449170,109490605,109501503	109437146,109449489,109490936,109504632	Gene ID= ENSG00000172985.10 TPM= 66.61 Transcript Type= NA
chr2	109436653	109438089	109436653	109438089	+	transcript3806.chr2.nnic@SH3RF3	transcript3806.chr2.nnic	protein_coding	109436653,109436893,109437865	109436807,109437146,109438089	Gene ID= ENSG00000172985.10 TPM= 2.9 Transcript Type= NA
chr2	109436597	109438089	109436597	109438089	+	transcript3808.chr2.nnic@SH3RF3	transcript3808.chr2.nnic	protein_coding	109436597,109437865	109437146,109438089	Gene ID= ENSG00000172985.10 TPM= 5.79 Transcript Type= NA
chr2	109542982	109614206	109542982	109614206	-	ENST00000397712.6@SEPT10	ENST00000397712.6	protein_coding	109613798,109593051,109585721,109585126,109574581,109567815,109565763,109564366,109553087,109546050,109542982	109614206,109593119,109585838,109585321,109574767,109567976,109565859,109564534,109553219,109546237,109544324	Gene ID= ENSG00000186522.14 TPM= 33.06 Transcript Type= protein_coding
chr2	109542982	109613957	109542982	109613957	-	transcript3826.chr2.nic@SEPT10	transcript3826.chr2.nic	protein_coding	109613798,109574581,109567815,109565763,109564366,109553087,109546050,109542982	109613957,109574767,109567976,109565859,109564534,109553219,109546237,109544324	Gene ID= ENSG00000186522.14 TPM= 2.17 Transcript Type= NA
chr2	109542982	109614154	109542982	109614154	-	transcript3827.chr2.nic@SEPT10	transcript3827.chr2.nic	protein_coding	109613798,109593051,109567815,109565763,109564366,109553087,109546050,109542982	109614154,109593119,109567976,109565859,109564534,109553219,109546237,109544324	Gene ID= ENSG00000186522.14 TPM= 3.14 Transcript Type= NA
chr2	109542986	109613927	109542986	109613927	-	ENST00000397714.6@SEPT10	ENST00000397714.6	protein_coding	109613798,109585721,109585126,109574581,109567815,109565763,109564366,109553087,109546050,109542986	109613927,109585838,109585321,109574767,109567976,109565859,109564534,109553219,109546237,109544324	Gene ID= ENSG00000186522.14 TPM= 3.14 Transcript Type= protein_coding
chr2	110083870	110116566	110083870	110116566	-	ENST00000272462.2@MALL	ENST00000272462.2	protein_coding	110115688,110091603,110087572,110083870	110116566,110091770,110087697,110085757	Gene ID= ENSG00000144063.3 TPM= 15.44 Transcript Type= protein_coding
chr2	110123336	110205036	110123336	110205036	-	transcript3837.chr2.nic@NPHP1	transcript3837.chr2.nic	protein_coding	110204900,110201421,110179624,110178423,110169806,110168452,110165052,110164688,110163048,110161603,110160127,110150182,110147916,110146753,110144493,110143542,110131679,110129186,110125637,110123336	110205036,110201494,110179684,110178547,110169998,110168553,110165155,110164730,110163132,110161697,110160255,110150256,110148026,110146835,110144569,110143641,110131791,110129259,110125681,110124063	Gene ID= ENSG00000144061.12 TPM= 2.9 Transcript Type= NA
chr2	110122311	110205042	110122311	110205042	-	ENST00000316534.8@NPHP1	ENST00000316534.8	protein_coding	110204900,110201421,110179624,110178423,110169806,110168452,110165052,110164520,110163048,110161603,110160127,110150182,110147916,110146753,110144493,110143542,110131679,110129186,110125637,110122311	110205042,110201494,110179684,110178547,110169998,110168553,110165155,110164730,110163135,110161697,110160255,110150256,110148026,110146835,110144569,110143641,110131791,110129259,110125681,110124063	Gene ID= ENSG00000144061.12 TPM= 1.93 Transcript Type= protein_coding
chr2	110164339	110204983	110164339	110204983	-	transcript3844.chr2.nic@NPHP1	transcript3844.chr2.nic	protein_coding	110204900,110201421,110179624,110178423,110169806,110168452,110165052,110164339	110204983,110201494,110179684,110178547,110169998,110168553,110165155,110164730	Gene ID= ENSG00000144061.12 TPM= 1.93 Transcript Type= NA
chr2	110178047	110205036	110178047	110205036	-	transcript3849.chr2.nic@NPHP1	transcript3849.chr2.nic	protein_coding	110204900,110201421,110179624,110178047	110205036,110201494,110179684,110178935	Gene ID= ENSG00000144061.12 TPM= 1.93 Transcript Type= NA
chr2	110123336	110204992	110123336	110204992	-	ENST00000445609.6@NPHP1	ENST00000445609.6	protein_coding	110204900,110201421,110179624,110178423,110169806,110168452,110165052,110164688,110163048,110161603,110160127,110150182,110147916,110146753,110144493,110143542,110131679,110129186,110125637,110123336	110204992,110201494,110179684,110178547,110169998,110168553,110165155,110164730,110163135,110161697,110160255,110150256,110148026,110146835,110144569,110143641,110131791,110129259,110125681,110124063	Gene ID= ENSG00000144061.12 TPM= 2.9 Transcript Type= protein_coding
chr2	110211529	110245420	110211529	110245420	-	ENST00000414416.2@LINC00116	ENST00000414416.2	protein_coding	110244988,110222737,110219651,110217659,110216664,110215677,110214786,110212215,110211529	110245420,110222939,110219777,110217788,110216763,110215807,110214957,110212875,110211622	Gene ID= ENSG00000175701.10 TPM= 422.81 Transcript Type= protein_coding
chr2	110211530	110212562	110211530	110212562	-	ENST00000611969.4@LINC00116	ENST00000611969.4	protein_coding	110212215,110211530	110212562,110211622	Gene ID= ENSG00000175701.10 TPM= 2.9 Transcript Type= protein_coding
chr2	110465052	110473075	110465052	110473075	-	ENST00000413601.3@LIMS4	ENST00000413601.3	protein_coding	110472597,110468095,110465052	110473075,110468254,110465627	Gene ID= ENSG00000256671.6 TPM= 2.9 Transcript Type= protein_coding
chr2	111118492	111120040	111118492	111120040	-	transcript3861.chr2.nnic@NA	transcript3861.chr2.nnic	NA	111118492	111120040	Gene ID= novel_gene_chr2_3862 TPM= 3.86 Transcript Type= NA
chr2	111120119	111122451	111120119	111122451	-	transcript3859.chr2.nnic@NA	transcript3859.chr2.nnic	NA	111120119	111122451	Gene ID= novel_gene_chr2_3860 TPM= 2.9 Transcript Type= NA
chr2	111767637	111884690	111767637	111884690	-	ENST00000341068.7@ANAPC1	ENST00000341068.7	protein_coding	111883942,111880613,111878810,111873613,111873308,111872630,111868023,111864806,111863675,111862389,111858306,111856796,111856614,111850776,111847725,111847138,111843412,111838438,111834604,111833220,111831286,111825777,111825131,111824966,111822422,111821239,111818840,111815370,111808947,111805802,111803705,111803448,111802428,111800797,111794818,111794233,111794078,111792362,111788234,111785360,111784323,111783897,111782369,111780299,111778675,111776859,111772341,111767637	111884690,111880849,111878971,111873664,111873408,111872712,111868096,111864951,111863895,111862598,111858401,111856886,111856679,111850910,111847865,111847198,111843599,111838512,111834872,111833311,111831434,111825855,111825167,111825036,111822600,111821453,111818958,111815641,111809181,111805893,111803839,111803530,111802506,111800871,111794894,111794323,111794131,111792555,111788320,111785477,111784400,111783964,111782507,111780385,111778770,111777057,111772475,111769406	Gene ID= ENSG00000153107.11 TPM= 3.86 Transcript Type= protein_coding
chr2	112211525	112255111	112211525	112255111	-	ENST00000409573.6@ZC3H8	ENST00000409573.6	protein_coding	112254908,112250191,112238315,112236562,112234120,112233260,112231838,112230903,112211525	112255111,112250272,112238528,112236695,112234236,112233371,112231947,112230950,112216468	Gene ID= ENSG00000144161.12 TPM= 1.93 Transcript Type= protein_coding
chr2	112215905	112255086	112215905	112255086	-	transcript3876.chr2.nic@ZC3H8	transcript3876.chr2.nic	protein_coding	112254908,112250191,112238315,112236562,112234120,112233260,112231838,112230703,112215905	112255086,112250272,112238528,112236695,112234236,112233371,112231947,112230950,112216468	Gene ID= ENSG00000144161.12 TPM= 1.93 Transcript Type= NA
chr2	112215865	112255087	112215865	112255087	-	ENST00000272570.9@ZC3H8	ENST00000272570.9	protein_coding	112254908,112250191,112238315,112236562,112234120,112233258,112231838,112230903,112215865	112255087,112250272,112238528,112236695,112234236,112233371,112231945,112230950,112216468	Gene ID= ENSG00000144161.12 TPM= 3.86 Transcript Type= protein_coding
chr2	112275594	112340059	112275594	112340059	+	ENST00000409871.5@ZC3H6	ENST00000409871.5	protein_coding	112275594,112299849,112303229,112309885,112311804,112316470,112317221,112321756,112322649,112324152,112324964,112331005	112276026,112300029,112303351,112310161,112311937,112316586,112317332,112321865,112322902,112324663,112325197,112340059	Gene ID= ENSG00000188177.13 TPM= 3.86 Transcript Type= protein_coding
chr2	112484085	112532406	112484085	112532406	+	transcript3896.chr2.nnic@TTL	transcript3896.chr2.nnic	protein_coding	112484085,112485917,112494143,112501206,112502912,112520282,112528681	112484204,112485995,112494375,112501341,112503181,112520425,112532406	Gene ID= ENSG00000114999.7 TPM= 10.62 Transcript Type= NA
chr2	112482169	112532402	112482169	112532402	+	transcript3897.chr2.nnic@TTL	transcript3897.chr2.nnic	protein_coding	112482169,112485917,112494143,112501206,112502912,112528681	112482501,112485995,112494375,112501341,112503181,112532402	Gene ID= ENSG00000114999.7 TPM= 9.65 Transcript Type= NA
chr2	112482122	112532406	112482122	112532406	+	transcript3898.chr2.nnic@TTL	transcript3898.chr2.nnic	protein_coding	112482122,112494143,112501206,112502912,112520282,112528681	112482501,112494375,112501341,112503181,112520425,112532406	Gene ID= ENSG00000114999.7 TPM= 10.62 Transcript Type= NA
chr2	112482166	112484225	112482166	112484225	+	transcript3903.chr2.nnic@NA	transcript3903.chr2.nnic	NA	112482166	112484225	Gene ID= novel_gene_chr2_3904 TPM= 1.93 Transcript Type= NA
chr2	112542429	112576295	112542429	112576295	+	transcript3907.chr2.nnic@POLR1B	transcript3907.chr2.nnic	protein_coding	112542429,112547012,112547421,112549267,112550866,112551775,112552645,112554524,112557910,112559293,112564366,112567967,112568746,112572562,112573562,112574847	112542671,112547179,112547567,112549399,112551002,112551998,112552816,112554578,112558081,112559574,112564499,112568137,112568902,112572758,112573815,112576295	Gene ID= ENSG00000125630.15 TPM= 1.93 Transcript Type= NA
chr2	112542036	112577150	112542036	112577150	+	ENST00000541869.5@POLR1B	ENST00000541869.5	protein_coding	112542036,112542396,112547012,112547421,112549267,112550866,112551775,112552645,112557910,112559293,112564366,112567967,112568746,112572562,112573562,112574847	112542166,112542671,112547179,112547567,112549399,112551002,112551998,112552816,112558081,112559574,112564499,112568137,112568902,112572758,112573815,112577150	Gene ID= ENSG00000125630.15 TPM= 4.83 Transcript Type= protein_coding
chr2	112584423	112589040	112584423	112589040	+	transcript3917.chr2.nic@CHCHD5	transcript3917.chr2.nic	protein_coding	112584423,112585974,112586200,112588866	112584486,112586114,112586365,112589040	Gene ID= ENSG00000125611.15 TPM= 6.76 Transcript Type= NA
chr2	112584441	112589040	112584441	112589040	+	ENST00000324913.9@CHCHD5	ENST00000324913.9	protein_coding	112584441,112585974,112586200,112588866	112584649,112586114,112586365,112589040	Gene ID= ENSG00000125611.15 TPM= 30.89 Transcript Type= protein_coding
chr2	112584447	112589040	112584447	112589040	+	transcript3920.chr2.nnic@CHCHD5	transcript3920.chr2.nnic	protein_coding	112584447,112588866	112584649,112589040	Gene ID= ENSG00000125611.15 TPM= 4.83 Transcript Type= NA
chr2	112645030	112645308	112645030	112645308	-	transcript3923.chr2.nnic@NA	transcript3923.chr2.nnic	NA	112645030	112645308	Gene ID= novel_gene_chr2_3924 TPM= 2.9 Transcript Type= NA
chr2	112645923	112663825	112645923	112663825	+	transcript3926.chr2.nic@SLC20A1	transcript3926.chr2.nic	protein_coding	112645923,112646563,112647324,112647653,112652702,112652889,112657122,112658825,112659204,112660387,112661142,112662864	112646129,112647162,112647464,112647738,112652798,112652947,112657241,112659094,112659762,112660572,112661226,112663825	Gene ID= ENSG00000144136.10 TPM= 6.76 Transcript Type= NA
chr2	112645857	112663827	112645857	112663827	+	ENST00000272542.7@SLC20A1	ENST00000272542.7	protein_coding	112645857,112646563,112647324,112647653,112652702,112657122,112658825,112659204,112660387,112661142,112662864	112646129,112647162,112647464,112647738,112652798,112657241,112659094,112659762,112660572,112661226,112663827	Gene ID= ENSG00000144136.10 TPM= 24.13 Transcript Type= protein_coding
chr2	113437691	113496189	113437691	113496189	+	ENST00000259199.8@CBWD2	ENST00000259199.8	protein_coding	113437691,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113465129,113471033,113482177,113493757,113493929,113495120,113495637	113438022,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113465173,113471089,113482228,113493825,113493994,113495249,113496189	Gene ID= ENSG00000136682.14 TPM= 52.13 Transcript Type= protein_coding
chr2	113437777	113496119	113437777	113496119	+	transcript3950.chr2.nnic@CBWD2	transcript3950.chr2.nnic	protein_coding	113437777,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113471033,113482177,113493757,113493929,113495120,113495637	113438022,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113471089,113482228,113493825,113493994,113495249,113496119	Gene ID= ENSG00000136682.14 TPM= 2.9 Transcript Type= NA
chr2	113437777	113496171	113437777	113496171	+	transcript3954.chr2.nnic@CBWD2	transcript3954.chr2.nnic	protein_coding	113437777,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113482177,113493757,113493929,113495120,113495637	113438022,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113482228,113493825,113493994,113495249,113496171	Gene ID= ENSG00000136682.14 TPM= 1.93 Transcript Type= NA
chr2	113437791	113496119	113437791	113496119	+	ENST00000358604.7@CBWD2	ENST00000358604.7	protein_coding	113437791,113439020,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113465129,113471033,113482177,113493757,113493929,113495120,113495637	113438022,113439117,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113465173,113471089,113482228,113493825,113493994,113495249,113496119	Gene ID= ENSG00000136682.14 TPM= 13.51 Transcript Type= nonsense_mediated_decay
chr2	113588550	113599034	113588550	113599034	+	ENST00000453662.6@WASH2P	ENST00000453662.6	transcribed_unprocessed_pseudogene	113588550,113595063,113595369,113595693,113596068,113596381,113596671,113597486,113598398,113598607	113588703,113595161,113595515,113595829,113596203,113596582,113596829,113597638,113598466,113599034	Gene ID= ENSG00000146556.14 TPM= 18.34 Transcript Type= transcribed_unprocessed_pseudogene
chr2	113599027	113603817	113599027	113603817	-	transcript3962.chr2.nnic@DDX11L2	transcript3962.chr2.nnic	unprocessed_pseudogene	113603595,113601212,113599027	113603817,113601429,113600826	Gene ID= ENSG00000236397.3 TPM= 2.9 Transcript Type= NA
chr2	113712792	113756823	113712792	113756823	-	ENST00000245680.6@SLC35F5	ENST00000245680.6	protein_coding	113756370,113755454,113755165,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113717753,113712792	113756823,113755544,113755306,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113717850,113715195	Gene ID= ENSG00000115084.13 TPM= 8.69 Transcript Type= protein_coding
chr2	113714356	113756673	113714356	113756673	-	transcript3976.chr2.nic@SLC35F5	transcript3976.chr2.nic	protein_coding	113755855,113755454,113755165,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113717753,113714356	113756673,113755544,113755306,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113717850,113715195	Gene ID= ENSG00000115084.13 TPM= 1.93 Transcript Type= NA
chr2	113714355	113756644	113714355	113756644	-	transcript3980.chr2.nnic@SLC35F5	transcript3980.chr2.nnic	protein_coding	113756370,113755454,113755165,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113714355	113756644,113755544,113755306,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113715195	Gene ID= ENSG00000115084.13 TPM= 1.93 Transcript Type= NA
chr2	113717307	113756644	113717307	113756644	-	transcript3985.chr2.nic@SLC35F5	transcript3985.chr2.nic	protein_coding	113756370,113755454,113755165,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113717307	113756644,113755544,113755306,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113717850	Gene ID= ENSG00000115084.13 TPM= 2.9 Transcript Type= NA
chr2	113889960	113962596	113889960	113962596	+	ENST00000263238.6@ACTR3	ENST00000263238.6	protein_coding	113889960,113913172,113916884,113927345,113931301,113934279,113939959,113942186,113951479,113951720,113955623,113957360	113890323,113913227,113917008,113927455,113931396,113934386,113940102,113942359,113951571,113951845,113955706,113962596	Gene ID= ENSG00000115091.11 TPM= 18.34 Transcript Type= protein_coding
chr2	117814650	117832379	117814650	117832379	+	ENST00000263239.6@DDX18	ENST00000263239.6	protein_coding	117814650,117817444,117819649,117821161,117821650,117821862,117822147,117824569,117824940,117825447,117826269,117828949,117829289,117830582	117814862,117817728,117819792,117821296,117821750,117822061,117822261,117824708,117825101,117825599,117826382,117829005,117829466,117832379	Gene ID= ENSG00000088205.12 TPM= 14.48 Transcript Type= protein_coding
chr2	117919997	118014154	117919997	118014154	-	transcript4008.chr2.nnic@CCDC93	transcript4008.chr2.nnic	protein_coding	118013954,118008545,118006722,118000821,117996264,117995446,117985969,117985389,117977994,117975188,117974850,117973908,117958365,117952373,117949322,117948105,117946811,117945529,117944024,117941189,117939029,117936702,117935495,117931037,117919997	118014154,118008658,118006816,118000932,117996362,117995502,117986069,117985406,117978030,117975280,117974900,117973994,117958481,117952435,117949395,117948186,117946882,117945582,117944086,117941297,117939111,117936739,117935579,117931150,117920396	Gene ID= ENSG00000125633.10 TPM= 1.93 Transcript Type= NA
chr2	117935498	118014154	117935498	118014154	-	transcript4010.chr2.nic@CCDC93	transcript4010.chr2.nic	protein_coding	118013954,118008545,118006722,118000821,117996264,117995446,117985969,117977994,117975188,117974850,117973908,117958365,117952373,117949322,117948105,117946811,117945529,117944024,117941189,117939029,117936702,117935498	118014154,118008658,118006816,118000932,117996362,117995502,117986069,117978030,117975280,117974900,117973994,117958481,117952435,117949395,117948186,117946882,117945582,117944086,117941297,117939111,117936739,117935579	Gene ID= ENSG00000125633.10 TPM= 2.9 Transcript Type= NA
chr2	118088474	118110028	118088474	118110028	+	ENST00000245787.8@INSIG2	ENST00000245787.8	protein_coding	118088474,118096419,118103197,118106737,118107090,118108281	118088541,118096800,118103321,118106903,118107189,118110028	Gene ID= ENSG00000125629.14 TPM= 8.69 Transcript Type= protein_coding
chr2	118835263	118836760	118835263	118836760	+	transcript4022.chr2.nnic@NA	transcript4022.chr2.nnic	NA	118835263	118836760	Gene ID= novel_gene_chr2_4023 TPM= 3.86 Transcript Type= NA
chr2	118842171	118847678	118842171	118847678	-	ENST00000295206.6@EN1	ENST00000295206.6	protein_coding	118846306,118842171	118847678,118843254	Gene ID= ENSG00000163064.6 TPM= 7.72 Transcript Type= protein_coding
chr2	119223716	119265652	119223716	119265652	+	transcript4026.chr2.nnic@STEAP3	transcript4026.chr2.nnic	protein_coding	119223716,119244424,119245489,119247679,119254684,119263057	119223888,119244516,119245988,119248206,119254848,119265652	Gene ID= ENSG00000115107.19 TPM= 7.72 Transcript Type= NA
chr2	119223831	119265652	119223831	119265652	+	ENST00000393110.6@STEAP3	ENST00000393110.6	protein_coding	119223831,119230620,119245489,119247679,119254684,119263057	119223888,119231034,119245988,119248206,119254848,119265652	Gene ID= ENSG00000115107.19 TPM= 9.65 Transcript Type= protein_coding
chr2	119223831	119265652	119223831	119265652	+	ENST00000393106.6@STEAP3	ENST00000393106.6	protein_coding	119223831,119239363,119245489,119247679,119254684,119263057	119223888,119239430,119245988,119248206,119254848,119265652	Gene ID= ENSG00000115107.19 TPM= 7.72 Transcript Type= protein_coding
chr2	119366921	119372560	119366921	119372560	+	ENST00000355857.7@DBI	ENST00000355857.7	protein_coding	119366921,119368188,119370740,119372245	119367060,119368305,119370802,119372560	Gene ID= ENSG00000155368.16 TPM= 58.88 Transcript Type= protein_coding
chr2	119679167	119682118	119679167	119682118	+	ENST00000401466.5@TMEM177	ENST00000401466.5	protein_coding	119679167,119680832	119679225,119682118	Gene ID= ENSG00000144120.12 TPM= 11.27 Transcript Type= protein_coding
chr2	119679170	119682118	119679170	119682118	+	ENST00000272521.6@TMEM177	ENST00000272521.6	protein_coding	119679170,119680832	119679276,119682118	Gene ID= ENSG00000144120.12 TPM= 11.27 Transcript Type= protein_coding
chr2	119679167	119682118	119679167	119682118	+	ENST00000424086.5@TMEM177	ENST00000424086.5	protein_coding	119679167,119680832	119679617,119682118	Gene ID= ENSG00000144120.12 TPM= 2.58 Transcript Type= protein_coding
chr2	119759960	119977461	119759960	119977461	+	transcript4045.chr2.nnic@PTPN4	transcript4045.chr2.nnic	protein_coding	119759960,119809837,119862536,119877323,119877464,119881786,119882097,119882503,119885795,119900718,119915179,119916467,119920069,119926598,119932424,119934800,119945081,119946341,119946518,119951973,119955157,119956844,119957016,119960807,119962616,119965497,119967837,119976984	119760384,119809991,119862643,119877365,119877542,119881830,119882149,119882623,119885882,119900806,119915242,119916690,119920241,119926666,119932549,119934958,119945240,119946424,119946574,119952129,119955323,119956934,119957077,119960953,119962744,119965645,119967972,119977461	Gene ID= ENSG00000088179.8 TPM= 2.9 Transcript Type= NA
chr2	120013032	120105686	120013032	120105686	+	transcript4058.chr2.nnic@EPB41L5	transcript4058.chr2.nnic	protein_coding	120013032,120019077,120042006,120073178,120074100,120075476,120075701,120076971,120077229,120078493,120087171,120090347,120091555,120093249,120100244,120100699,120101589,120104060	120013210,120019264,120042110,120073220,120074178,120075520,120075753,120077091,120077316,120078581,120087240,120090516,120091661,120093276,120100286,120100814,120101719,120105686	Gene ID= ENSG00000115109.13 TPM= 1.93 Transcript Type= NA
chr2	120013032	120105112	120013032	120105112	+	transcript4060.chr2.nnic@EPB41L5	transcript4060.chr2.nnic	protein_coding	120013032,120019077,120042006,120073178,120074100,120075476,120075701,120076971,120077229,120078493,120087171,120090347,120091555,120093249,120100244,120100699,120101635,120104060	120013210,120019264,120042110,120073220,120074178,120075520,120075753,120077091,120077316,120078581,120087240,120090516,120091661,120093276,120100286,120100814,120101719,120105112	Gene ID= ENSG00000115109.13 TPM= 4.83 Transcript Type= NA
chr2	120217478	120223373	120217478	120223373	-	transcript4066.chr2.nnic@NA	transcript4066.chr2.nnic	NA	120217478	120223373	Gene ID= novel_gene_chr2_4067 TPM= 4.83 Transcript Type= NA
chr2	120221278	120223408	120221278	120223408	-	ENST00000426077.2@TMEM185B	ENST00000426077.2	protein_coding	120221278	120223408	Gene ID= ENSG00000226479.3 TPM= 5.79 Transcript Type= protein_coding
chr2	120252817	120294713	120252817	120294713	+	transcript4075.chr2.nnic@RALB	transcript4075.chr2.nnic	protein_coding	120252817,120278618,120289580,120293141	120252980,120278778,120289757,120294713	Gene ID= ENSG00000144118.13 TPM= 7.96 Transcript Type= NA
chr2	121376044	121649493	121376044	121649493	-	transcript4080.chr2.nnic@CLASP1	transcript4080.chr2.nnic	protein_coding	121649374,121605701,121530247,121528677,121527799,121525845,121515665,121503167,121469808,121462532,121461101,121459980,121458840,121457687,121451790,121450913,121448953,121448282,121447337,121445449,121430073,121425139,121410866,121409024,121407471,121404371,121401868,121401509,121398318,121397140,121387763,121387122,121376044	121649493,121606187,121530327,121528780,121527892,121525920,121515762,121503236,121469960,121462607,121461195,121460125,121458975,121457759,121451849,121450990,121449120,121448325,121447512,121445496,121430177,121425306,121410969,121409047,121407712,121404434,121401870,121401672,121398400,121397283,121387906,121387228,121377649	Gene ID= ENSG00000074054.17 TPM= 31.86 Transcript Type= NA
chr2	121337776	121649476	121337776	121649476	-	ENST00000541377.5@CLASP1	ENST00000541377.5	protein_coding	121649372,121605701,121530247,121528677,121527799,121525845,121515665,121503167,121469808,121462532,121461101,121459980,121458840,121457687,121451790,121450913,121448953,121448276,121447337,121445449,121430073,121425139,121410866,121409024,121407471,121404371,121401868,121401509,121398322,121397140,121387763,121387122,121377499,121367588,121365094,121363172,121348512,121347038,121337776	121649476,121606180,121530325,121528780,121527890,121525920,121515762,121503234,121469960,121462605,121461193,121460125,121458975,121457757,121451849,121450990,121449120,121448325,121447507,121445496,121430177,121425306,121410969,121409047,121407712,121404434,121401870,121401672,121398400,121397283,121387906,121387228,121377649,121367831,121365284,121363300,121348718,121347154,121340947	Gene ID= ENSG00000074054.17 TPM= 74.33 Transcript Type= protein_coding
chr2	121530881	121531007	121530881	121531007	+	ENST00000580972.1@RNU4ATAC	ENST00000580972.1	snRNA	121530881	121531007	Gene ID= ENSG00000264229.1 TPM= 1.93 Transcript Type= snRNA
chr2	121650082	121651535	121650082	121651535	+	ENST00000447668.2@NIFK-AS1	ENST00000447668.2	antisense_RNA	121650082,121650468	121650381,121651535	Gene ID= ENSG00000236859.6 TPM= 1.93 Transcript Type= antisense_RNA
chr2	121726945	121736923	121726945	121736923	-	ENST00000285814.8@NIFK	ENST00000285814.8	protein_coding	121736746,121735613,121732096,121730893,121728477,121728288,121726945	121736923,121735750,121732204,121731104,121728536,121728356,121727912	Gene ID= ENSG00000155438.11 TPM= 10.62 Transcript Type= protein_coding
chr2	121755533	121767853	121755533	121767853	+	ENST00000389682.7@TSN	ENST00000389682.7	protein_coding	121755533,121757240,121758710,121761409,121763005,121765134	121755845,121757333,121758806,121761524,121763084,121767853	Gene ID= ENSG00000211460.11 TPM= 39.58 Transcript Type= protein_coding
chr2	121755659	121767294	121755659	121767294	+	ENST00000467324.5@TSN	ENST00000467324.5	protein_coding	121755659,121757240,121758710,121761409,121763005,121765134	121755953,121757333,121758806,121761524,121763084,121767294	Gene ID= ENSG00000211460.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr2	126655933	126696670	126655933	126696670	+	ENST00000259254.8@GYPC	ENST00000259254.8	protein_coding	126655933,126690255,126693864,126695946	126656312,126690311,126693947,126696670	Gene ID= ENSG00000136732.14 TPM= 55.02 Transcript Type= protein_coding
chr2	126656184	126696664	126656184	126696664	+	ENST00000409836.3@GYPC	ENST00000409836.3	protein_coding	126656184,126693864,126695946	126656312,126693947,126696664	Gene ID= ENSG00000136732.14 TPM= 9.65 Transcript Type= protein_coding
chr2	127048038	127107329	127048038	127107329	-	transcript4128.chr2.nic@BIN1	transcript4128.chr2.nic	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127060596,127059011,127052255,127051154,127050802,127050421,127048038	127107329,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127060640,127059155,127052362,127051243,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 137.55 Transcript Type= NA
chr2	127048027	127107355	127048027	127107355	-	ENST00000316724.9@BIN1	ENST00000316724.9	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127068163,127063933,127063571,127062115,127059011,127057473,127053905,127053422,127052255,127051154,127050802,127050421,127048027	127107355,127076706,127070816,127070647,127070090,127069031,127068255,127064018,127063646,127062197,127059155,127057601,127054012,127053445,127052362,127051243,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 23.61 Transcript Type= protein_coding
chr2	127048035	127107078	127048035	127107078	-	transcript4266.chr2.nnic@BIN1	transcript4266.chr2.nnic	protein_coding	127107028,127048035	127107078,127048243	Gene ID= ENSG00000136717.14 TPM= 68.54 Transcript Type= NA
chr2	127048027	127107288	127048027	127107288	-	ENST00000352848.7@BIN1	ENST00000352848.7	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127060596,127059011,127051154,127050802,127050421,127048027	127107288,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127060640,127059155,127051243,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 3312.42 Transcript Type= protein_coding
chr2	127048027	127107001	127048027	127107001	-	ENST00000376113.6@BIN1	ENST00000376113.6	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127060596,127059011,127050802,127050421,127048027	127107001,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127060640,127059155,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 715 Transcript Type= protein_coding
chr2	127048027	127107288	127048027	127107288	-	ENST00000259238.8@BIN1	ENST00000259238.8	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127060596,127059011,127057473,127051154,127050802,127050421,127048027	127107288,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127060640,127059155,127057601,127051243,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 186.69 Transcript Type= protein_coding
chr2	127048038	127107278	127048038	127107278	-	ENST00000409400.1@BIN1	ENST00000409400.1	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127051154,127050802,127050421,127048038	127107278,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127051243,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 51.67 Transcript Type= protein_coding
chr2	127048027	127107288	127048027	127107288	-	ENST00000348750.8@BIN1	ENST00000348750.8	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127050802,127050421,127048027	127107288,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 48.33 Transcript Type= protein_coding
chr2	127135751	127137967	127135751	127137967	-	transcript4271.chr2.nnic@NA	transcript4271.chr2.nnic	NA	127135751	127137967	Gene ID= novel_gene_chr2_4272 TPM= 1.93 Transcript Type= NA
chr2	127141886	127147232	127141886	127147232	-	transcript4273.chr2.nnic@NA	transcript4273.chr2.nnic	NA	127146913,127141886	127147232,127143081	Gene ID= novel_gene_chr2_4274 TPM= 2.9 Transcript Type= NA
chr2	127257290	127294176	127257290	127294176	-	ENST00000285398.6@ERCC3	ENST00000285398.6	protein_coding	127294054,127293513,127292610,127290224,127289689,127289337,127288660,127286703,127280447,127279173,127272865,127271336,127261228,127259296,127257290	127294176,127293718,127292846,127290273,127289824,127289501,127288864,127287017,127280631,127279375,127272961,127271453,127261346,127259448,127257727	Gene ID= ENSG00000163161.12 TPM= 60.81 Transcript Type= protein_coding
chr2	127300388	127302018	127300388	127302018	-	transcript4282.chr2.nnic@NA	transcript4282.chr2.nnic	NA	127300388	127302018	Gene ID= novel_gene_chr2_4283 TPM= 2.9 Transcript Type= NA
chr2	127305931	127388064	127305931	127388064	-	transcript4286.chr2.nic@MAP3K2	transcript4286.chr2.nic	protein_coding	127387452,127343126,127338932,127337738,127335870,127330392,127329921,127326687,127325728,127324174,127323902,127322046,127318169,127317629,127314754,127308585,127305931	127388064,127343194,127339050,127337778,127335969,127330505,127330008,127326817,127325807,127324241,127323994,127322252,127318317,127317760,127314883,127308762,127307804	Gene ID= ENSG00000169967.16 TPM= 35.72 Transcript Type= NA
chr2	127383876	127387974	127383876	127387974	-	transcript4293.chr2.nnic@NA	transcript4293.chr2.nnic	NA	127383876	127387974	Gene ID= novel_gene_chr2_4294 TPM= 2.9 Transcript Type= NA
chr2	127387499	127389408	127387499	127389408	+	transcript4291.chr2.nnic@AC068282.1	transcript4291.chr2.nnic	lincRNA	127387499,127388881,127389111	127388311,127388998,127389408	Gene ID= ENSG00000236682.1 TPM= 2.9 Transcript Type= NA
chr2	127387499	127389408	127387499	127389408	+	transcript4292.chr2.nnic@AC068282.1	transcript4292.chr2.nnic	lincRNA	127387499,127389111	127388998,127389408	Gene ID= ENSG00000236682.1 TPM= 1.93 Transcript Type= NA
chr2	127480810	127526518	127480810	127526518	-	transcript4297.chr2.nic@IWS1	transcript4297.chr2.nic	protein_coding	127526175,127523676,127504684,127503387,127502815,127498140,127495998,127494872,127493281,127491971,127489832,127489179,127486553,127485874,127480810	127526518,127523791,127505752,127503576,127502872,127498237,127496148,127494954,127493410,127492088,127489943,127489235,127486664,127486033,127481175	Gene ID= ENSG00000163166.14 TPM= 36.2 Transcript Type= NA
chr2	127489900	127526518	127489900	127526518	-	transcript4306.chr2.nic@IWS1	transcript4306.chr2.nic	protein_coding	127526175,127523676,127506692,127504684,127503387,127502815,127498140,127495998,127494872,127493281,127491971,127489900	127526518,127523791,127506719,127505752,127503576,127502872,127498237,127496148,127494954,127493410,127492088,127489943	Gene ID= ENSG00000163166.14 TPM= 1.93 Transcript Type= NA
chr2	127480806	127526468	127480806	127526468	-	ENST00000295321.8@IWS1	ENST00000295321.8	protein_coding	127526175,127523676,127504684,127503387,127502815,127498140,127495998,127494872,127493281,127491971,127489832,127489179,127486553,127480806	127526468,127523791,127505752,127503576,127502872,127498237,127496148,127494954,127493410,127492088,127489943,127489235,127486664,127481175	Gene ID= ENSG00000163166.14 TPM= 21.72 Transcript Type= protein_coding
chr2	127638428	127675190	127638428	127675190	-	ENST00000355119.8@LIMS2	ENST00000355119.8	protein_coding	127675014,127657403,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638428	127675190,127657562,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 14 Transcript Type= protein_coding
chr2	127638428	127681786	127638428	127681786	-	ENST00000410011.5@LIMS2	ENST00000410011.5	protein_coding	127681320,127657403,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638428	127681786,127657562,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 11.1 Transcript Type= protein_coding
chr2	127701496	127703831	127701496	127703831	+	transcript4320.chr2.nnic@NA	transcript4320.chr2.nnic	NA	127701496	127703831	Gene ID= novel_gene_chr2_4321 TPM= 25.1 Transcript Type= NA
chr2	127721922	127811169	127721922	127811169	-	transcript4325.chr2.nic@WDR33	transcript4325.chr2.nic	protein_coding	127811012,127770778,127768933,127768189,127765174,127764828,127763062,127726651,127725061,127724887,127724333,127723253,127722958,127722591,127721922	127811169,127771004,127769001,127768293,127765269,127764979,127763159,127726777,127725215,127724965,127724443,127723347,127723044,127722730,127721988	Gene ID= ENSG00000136709.11 TPM= 2.9 Transcript Type= NA
chr2	127843553	127858148	127843553	127858148	-	transcript4336.chr2.nnic@POLR2D	transcript4336.chr2.nnic	protein_coding	127858028,127850590,127846221,127843553	127858148,127850685,127848185,127844735	Gene ID= ENSG00000144231.10 TPM= 3.86 Transcript Type= NA
chr2	127845374	127858148	127845374	127858148	-	transcript4343.chr2.nnic@POLR2D	transcript4343.chr2.nnic	protein_coding	127858028,127850590,127845374	127858148,127850685,127848185	Gene ID= ENSG00000144231.10 TPM= 4.83 Transcript Type= NA
chr2	127846699	127858117	127846699	127858117	-	ENST00000409955.1@POLR2D	ENST00000409955.1	protein_coding	127858028,127852925,127846699	127858117,127853105,127848185	Gene ID= ENSG00000144231.10 TPM= 14 Transcript Type= protein_coding
chr2	127843551	127858157	127843551	127858157	-	ENST00000272645.8@POLR2D	ENST00000272645.8	protein_coding	127858028,127852925,127850590,127843551	127858157,127853105,127850685,127848185	Gene ID= ENSG00000144231.10 TPM= 12.07 Transcript Type= protein_coding
chr2	128091311	128195677	128091311	128195677	+	ENST00000259253.10@UGGT1	ENST00000259253.10	protein_coding	128091311,128097429,128103932,128107938,128109634,128113084,128115124,128116265,128120356,128121199,128123186,128127361,128129029,128133141,128134876,128138717,128143094,128145803,128152784,128155489,128156392,128157252,128159514,128160460,128161138,128164730,128170288,128171205,128172573,128173781,128174773,128176814,128177832,128178468,128179786,128180890,128182130,128183675,128186683,128187449,128189717	128091415,128097564,128104014,128108068,128109746,128113258,128115220,128116343,128120456,128121298,128123246,128127452,128129179,128133260,128134961,128138852,128143225,128145967,128152904,128155587,128156415,128157346,128159720,128160591,128161268,128164825,128170390,128171284,128172762,128173939,128174858,128176898,128177920,128178569,128179870,128181072,128182290,128183789,128186799,128187614,128195677	Gene ID= ENSG00000136731.12 TPM= 8.69 Transcript Type= protein_coding
chr2	128231658	128233644	128231658	128233644	-	transcript4366.chr2.nnic@NA	transcript4366.chr2.nnic	NA	128231658	128233644	Gene ID= novel_gene_chr2_4367 TPM= 1.93 Transcript Type= NA
chr2	128265480	128318577	128265480	128318577	-	ENST00000259241.6@HS6ST1	ENST00000259241.6	protein_coding	128318037,128265480	128318577,128268870	Gene ID= ENSG00000136720.6 TPM= 87.84 Transcript Type= protein_coding
chr2	129242173	129273848	129242173	129273848	-	ENST00000375987.3@LINC01854	ENST00000375987.3	lincRNA	129273607,129249866,129245153,129244143,129242173	129273848,129250074,129245229,129244349,129243650	Gene ID= ENSG00000204460.3 TPM= 9.49 Transcript Type= lincRNA
chr2	129242173	129273806	129242173	129273806	-	transcript4377.chr2.nnic@LINC01854	transcript4377.chr2.nnic	lincRNA	129273607,129249866,129244143,129242173	129273806,129250074,129244338,129243650	Gene ID= ENSG00000204460.3 TPM= 6.11 Transcript Type= NA
chr2	129922863	129934317	129922863	129934317	-	ENST00000433290.5@PLAC9P1	ENST00000433290.5	transcribed_unprocessed_pseudogene	129934179,129923558,129922863	129934317,129923681,129922999	Gene ID= ENSG00000214100.8 TPM= 1.93 Transcript Type= processed_transcript
chr2	130151409	130182750	130151409	130182750	-	ENST00000409031.5@SMPD4	ENST00000409031.5	protein_coding	130181530,130176554,130174914,130173514,130173279,130172787,130172625,130172349,130167458,130164374,130161186,130157251,130156585,130156035,130155096,130154277,130153702,130153319,130153043,130151409	130182750,130176637,130175000,130173656,130173354,130172895,130172677,130172500,130167590,130164445,130161272,130157396,130156675,130156135,130155259,130154482,130153935,130153450,130153171,130152884	Gene ID= ENSG00000136699.19 TPM= 46.33 Transcript Type= protein_coding
chr2	130181682	130190712	130181682	130190712	+	transcript4389.chr2.nic@MZT2B	transcript4389.chr2.nic	protein_coding	130181682,130182627,130183787,130190469	130181797,130182775,130183966,130190712	Gene ID= ENSG00000152082.13 TPM= 2.9 Transcript Type= NA
chr2	130181928	130190727	130181928	130190727	+	ENST00000281871.10@MZT2B	ENST00000281871.10	protein_coding	130181928,130182627,130190469	130182452,130182775,130190727	Gene ID= ENSG00000152082.13 TPM= 102.16 Transcript Type= protein_coding
chr2	130182248	130190713	130182248	130190713	+	transcript4395.chr2.nnic@MZT2B	transcript4395.chr2.nnic	protein_coding	130182248,130182679,130190469	130182452,130182775,130190713	Gene ID= ENSG00000152082.13 TPM= 6.76 Transcript Type= NA
chr2	130181737	130190713	130181737	130190713	+	ENST00000425361.5@MZT2B	ENST00000425361.5	protein_coding	130181737,130182627,130190469	130181797,130182775,130190713	Gene ID= ENSG00000152082.13 TPM= 19.31 Transcript Type= protein_coding
chr2	130181772	130190695	130181772	130190695	+	ENST00000457492.5@MZT2B	ENST00000457492.5	protein_coding	130181772,130182627,130190469	130181830,130182775,130190695	Gene ID= ENSG00000152082.13 TPM= 2.9 Transcript Type= protein_coding
chr2	130182257	130190712	130182257	130190712	+	ENST00000409255.1@MZT2B	ENST00000409255.1	protein_coding	130182257,130182627,130183787,130190469	130182452,130182775,130183966,130190712	Gene ID= ENSG00000152082.13 TPM= 5.79 Transcript Type= protein_coding
chr2	130182313	130190729	130182313	130190729	+	ENST00000455239.1@MZT2B	ENST00000455239.1	protein_coding	130182313,130190469	130182452,130190729	Gene ID= ENSG00000152082.13 TPM= 9.82 Transcript Type= protein_coding
chr2	130229364	130232121	130229364	130232121	+	transcript4398.chr2.nnic@NA	transcript4398.chr2.nnic	NA	130229364	130232121	Gene ID= novel_gene_chr2_4399 TPM= 8.69 Transcript Type= NA
chr2	130338241	130342349	130338241	130342349	-	ENST00000259229.6@CCDC115	ENST00000259229.6	protein_coding	130342015,130341841,130341667,130340908,130338241	130342349,130341944,130341749,130341039,130339232	Gene ID= ENSG00000136710.9 TPM= 14.48 Transcript Type= protein_coding
chr2	130342225	130346624	130342225	130346624	+	ENST00000259239.7@IMP4	ENST00000259239.7	protein_coding	130342225,130343086,130344629,130345376,130345567,130345779,130346018,130346201,130346356	130342935,130343194,130344712,130345485,130345699,130345933,130346112,130346274,130346624	Gene ID= ENSG00000136718.9 TPM= 52.93 Transcript Type= protein_coding
chr2	130342922	130347810	130342922	130347810	+	ENST00000460766.5@IMP4	ENST00000460766.5	protein_coding	130342922,130344629,130345376,130345567,130345779,130346018,130346201,130346356	130343194,130344712,130345485,130345699,130345933,130346112,130346274,130347810	Gene ID= ENSG00000136718.9 TPM= 28.31 Transcript Type= retained_intron
chr2	130354839	130355930	130354839	130355930	-	transcript4430.chr2.nnic@NA	transcript4430.chr2.nnic	NA	130354839	130355930	Gene ID= novel_gene_chr2_4431 TPM= 1.93 Transcript Type= NA
chr2	130356007	130375409	130356007	130375409	+	ENST00000175756.9@PTPN18	ENST00000175756.9	protein_coding	130356007,130358867,130359233,130359397,130359608,130369133,130369765,130370048,130370557,130370705,130370875,130371199,130372257,130372873,130373157	130356200,130358975,130359309,130359492,130359646,130369201,130369827,130370190,130370623,130370782,130370964,130371287,130372483,130372947,130375409	Gene ID= ENSG00000072135.12 TPM= 2.9 Transcript Type= protein_coding
chr2	130356045	130374571	130356045	130374571	+	ENST00000347849.7@PTPN18	ENST00000347849.7	protein_coding	130356045,130369133,130369765,130370048,130370557,130370705,130370875,130371199,130372257,130372873,130373157	130356200,130369201,130369827,130370190,130370623,130370782,130370964,130371287,130372483,130372947,130374571	Gene ID= ENSG00000072135.12 TPM= 1.93 Transcript Type= protein_coding
chr2	131035012	131047253	131035012	131047253	+	transcript4439.chr2.nnic@ARHGEF4	transcript4439.chr2.nnic	protein_coding	131035012,131035704,131038853,131040016,131040261,131041230,131041815,131043452,131044299,131045369,131046038	131035288,131035836,131039032,131040192,131040440,131041462,131041944,131043583,131044542,131045446,131047253	Gene ID= ENSG00000136002.18 TPM= 6.27 Transcript Type= NA
chr2	131034925	131047253	131034925	131047253	+	transcript4440.chr2.nic@ARHGEF4	transcript4440.chr2.nic	protein_coding	131034925,131038853,131040016,131040261,131041230,131041815,131043452,131044299,131045369,131046038	131035288,131039032,131040192,131040440,131041462,131041944,131043583,131044542,131045446,131047253	Gene ID= ENSG00000136002.18 TPM= 14.96 Transcript Type= NA
chr2	131104847	131149851	131104847	131149851	+	ENST00000403716.5@PLEKHB2	ENST00000403716.5	protein_coding	131104847,131120934,131125753,131126684,131130721,131132902,131140167,131144408,131146637	131105398,131120978,131125905,131126786,131130760,131132991,131140275,131144449,131149851	Gene ID= ENSG00000115762.16 TPM= 10.94 Transcript Type= protein_coding
chr2	131104847	131147797	131104847	131147797	+	ENST00000409158.5@PLEKHB2	ENST00000409158.5	protein_coding	131104847,131120934,131125753,131126684,131130721,131132902,131140167,131146637	131105398,131120978,131125905,131126786,131130760,131133015,131140275,131147797	Gene ID= ENSG00000115762.16 TPM= 21.24 Transcript Type= protein_coding
chr2	131104847	131149851	131104847	131149851	+	transcript4462.chr2.nnic@PLEKHB2	transcript4462.chr2.nnic	protein_coding	131104847,131125753,131126684,131130721,131132902,131140167,131146637	131105398,131125905,131126786,131130760,131132991,131140275,131149851	Gene ID= ENSG00000115762.16 TPM= 9.97 Transcript Type= NA
chr2	131104847	131149851	131104847	131149851	+	ENST00000439822.6@PLEKHB2	ENST00000439822.6	protein_coding	131104847,131120934,131125753,131126684,131140167,131146637	131105398,131120978,131125905,131126786,131140275,131149851	Gene ID= ENSG00000115762.16 TPM= 8.04 Transcript Type= protein_coding
chr2	131105304	131149847	131105304	131149847	+	transcript4468.chr2.nnic@PLEKHB2	transcript4468.chr2.nnic	protein_coding	131105304,131107461,131147628	131105398,131107819,131149847	Gene ID= ENSG00000115762.16 TPM= 11.58 Transcript Type= NA
chr2	131483960	131492422	131483960	131492422	-	ENST00000309451.6@MZT2A	ENST00000309451.6	protein_coding	131492207,131491876,131483960	131492422,131492024,131484218	Gene ID= ENSG00000173272.15 TPM= 53.09 Transcript Type= protein_coding
chr2	131493081	131521573	131493081	131521573	+	transcript4471.chr2.nnic@AC073869.1	transcript4471.chr2.nnic	transcribed_processed_pseudogene	131493081,131497210,131498867,131500204,131500506,131500962,131501181,131501358,131506312,131508537,131511715,131515602,131516314,131516857,131517727,131518503,131519050,131519535,131520097	131493140,131497293,131498953,131500346,131500581,131501070,131501233,131501508,131506442,131508608,131511801,131515747,131516404,131516957,131517890,131518708,131519283,131519666,131521573	Gene ID= ENSG00000152117.17 TPM= 12.55 Transcript Type= NA
chr2	131511873	131521573	131511873	131521573	+	transcript4473.chr2.nnic@AC073869.1	transcript4473.chr2.nnic	transcribed_processed_pseudogene	131511873,131515602,131516314,131516857,131517727,131518503,131519050,131519535,131520097	131513474,131515747,131516404,131516957,131517890,131518708,131519283,131519666,131521573	Gene ID= ENSG00000152117.17 TPM= 9.65 Transcript Type= NA
chr2	135052265	135170706	135052265	135170706	+	ENST00000264158.12@RAB3GAP1	ENST00000264158.12	protein_coding	135052265,135052430,135058011,135090998,135093615,135113151,135115216,135120819,135124165,135126181,135126583,135129995,135130552,135132895,135133861,135135265,135135564,135150369,135153649,135162555,135162748,135162986,135164594,135168545	135052325,135052485,135058086,135091130,135093693,135113270,135115381,135120918,135124246,135126249,135126656,135130087,135130721,135132984,135134033,135135319,135135932,135150506,135153876,135162651,135162851,135163101,135164696,135170706	Gene ID= ENSG00000115839.17 TPM= 3.86 Transcript Type= protein_coding
chr2	135052298	135169989	135052298	135169989	+	ENST00000442034.5@RAB3GAP1	ENST00000442034.5	protein_coding	135052298,135052430,135058011,135090998,135093615,135113151,135115216,135120819,135124165,135126181,135126583,135129995,135130552,135132895,135133861,135135265,135135564,135150369,135153649,135162555,135162748,135162986,135164594,135167693,135168545	135052325,135052485,135058086,135091130,135093693,135113270,135115381,135120918,135124246,135126249,135126656,135130087,135130721,135132984,135134033,135135319,135135932,135150506,135153876,135162651,135162851,135163101,135164696,135167713,135169989	Gene ID= ENSG00000115839.17 TPM= 12.55 Transcript Type= protein_coding
chr2	135531471	135636125	135531471	135636125	+	transcript4514.chr2.nic@R3HDM1	transcript4514.chr2.nic	protein_coding	135531471,135602500,135604806,135616152,135616668,135621494,135622654,135631718,135631861,135635890,135636088	135531633,135602708,135605016,135616193,135616757,135621608,135622732,135631777,135632001,135635998,135636125	Gene ID= ENSG00000048991.16 TPM= 1.93 Transcript Type= NA
chr2	135531513	135725270	135531513	135725270	+	ENST00000264160.8@R3HDM1	ENST00000264160.8	protein_coding	135531513,135602500,135604806,135616152,135616668,135621494,135622654,135631718,135631861,135635890,135636088,135638618,135638739,135638896,135641536,135645379,135651733,135661270,135675332,135680173,135709433,135710059,135715550,135721924,135722469,135723937	135531633,135602708,135605016,135616193,135616757,135621608,135622732,135631777,135632001,135635998,135636183,135638655,135638789,135639122,135641790,135645527,135652032,135661393,135675486,135680324,135709536,135710231,135715694,135722006,135722553,135725270	Gene ID= ENSG00000048991.16 TPM= 8.69 Transcript Type= protein_coding
chr2	135710088	135725270	135710088	135725270	+	transcript4518.chr2.nnic@R3HDM1	transcript4518.chr2.nnic	protein_coding	135710088,135715587,135721924,135722469,135723937	135710231,135715694,135722006,135722553,135725270	Gene ID= ENSG00000048991.16 TPM= 5.79 Transcript Type= NA
chr2	135741619	135785055	135741619	135785055	+	ENST00000272638.13@UBXN4	ENST00000272638.13	protein_coding	135741619,135748267,135753539,135754159,135755517,135761818,135769769,135770571,135772420,135776249,135778948,135780183,135782749	135742011,135748369,135753567,135754277,135755691,135761911,135769823,135770735,135772547,135776351,135779079,135780385,135785055	Gene ID= ENSG00000144224.16 TPM= 96.05 Transcript Type= protein_coding
chr2	135741635	135743398	135741635	135743398	+	transcript4544.chr2.nnic@NA	transcript4544.chr2.nnic	NA	135741635	135743398	Gene ID= novel_gene_chr2_4545 TPM= 2.9 Transcript Type= NA
chr2	135906677	135985684	135906677	135985684	-	ENST00000264161.8@DARS	ENST00000264161.8	protein_coding	135985403,135983397,135979274,135961396,135943378,135933910,135932783,135924387,135922784,135920453,135916226,135914469,135912486,135911382,135911139,135906677	135985684,135983454,135979366,135961498,135943480,135933990,135932842,135924498,135922918,135920600,135916372,135914511,135912566,135911493,135911210,135907407	Gene ID= ENSG00000115866.10 TPM= 29.92 Transcript Type= protein_coding
chr2	147844517	147930824	147844517	147930824	+	ENST00000241416.11@ACVR2A	ENST00000241416.11	protein_coding	147844517,147896301,147899458,147899744,147915191,147917283,147918447,147920230,147922973,147926031,147927080	147845207,147896508,147899567,147899898,147915334,147917426,147918592,147920344,147923111,147926161,147930824	Gene ID= ENSG00000121989.14 TPM= 2.9 Transcript Type= protein_coding
chr2	147844967	147929153	147844967	147929153	+	transcript4608.chr2.nnic@ACVR2A	transcript4608.chr2.nnic	protein_coding	147844967,147896299,147899456,147899742,147915191,147917283,147918447,147920230,147926031,147927080	147845207,147896508,147899567,147899898,147915334,147917426,147918592,147920344,147926161,147929153	Gene ID= ENSG00000121989.14 TPM= 16.41 Transcript Type= NA
chr2	148690335	148690524	148690335	148690524	+	transcript4618.chr2.nnic@NA	transcript4618.chr2.nnic	NA	148690335	148690524	Gene ID= novel_gene_chr2_4619 TPM= 1.93 Transcript Type= NA
chr2	149568782	149572345	149568782	149572345	+	transcript4626.chr2.nnic@NA	transcript4626.chr2.nnic	NA	149568782	149572345	Gene ID= novel_gene_chr2_4627 TPM= 1.93 Transcript Type= NA
chr2	149569634	149587816	149569634	149587816	-	ENST00000303319.9@MMADHC	ENST00000303319.9	protein_coding	149587664,149587089,149582127,149579431,149576437,149575711,149571085,149569634	149587816,149587149,149582271,149579648,149576542,149575841,149571171,149570168	Gene ID= ENSG00000168288.12 TPM= 208.51 Transcript Type= protein_coding
chr2	150468195	150487667	150468195	150487667	-	ENST00000375734.6@RND3	ENST00000375734.6	protein_coding	150487268,150486694,150474875,150471627,150468195	150487667,150486781,150474984,150471761,150470238	Gene ID= ENSG00000115963.13 TPM= 26.55 Transcript Type= protein_coding
chr2	150468195	150487694	150468195	150487694	-	ENST00000263895.8@RND3	ENST00000263895.8	protein_coding	150487549,150487268,150486694,150474875,150471627,150468195	150487694,150487455,150486781,150474984,150471761,150470238	Gene ID= ENSG00000115963.13 TPM= 14.96 Transcript Type= protein_coding
chr2	151270465	151290057	151270465	151290057	-	ENST00000243346.9@NMI	ENST00000243346.9	protein_coding	151289593,151282868,151281948,151278828,151275758,151275484,151271626,151270465	151290057,151282954,151282043,151278990,151275864,151275670,151271732,151270875	Gene ID= ENSG00000123609.10 TPM= 3.86 Transcript Type= protein_coding
chr2	151357592	151380048	151357592	151380048	+	ENST00000243347.4@TNFAIP6	ENST00000243347.4	protein_coding	151357592,151363943,151366056,151370020,151373549,151379364	151357760,151364080,151366217,151370248,151373589,151380048	Gene ID= ENSG00000123610.4 TPM= 2.9 Transcript Type= protein_coding
chr2	151409886	151475388	151409886	151475388	+	ENST00000428287.6@RIF1	ENST00000428287.6	protein_coding	151409886,151410414,151411260,151414823,151416561,151416807,151420190,151422950,151428784,151433077,151435463,151436827,151437241,151438684,151440027,151441905,151443259,151443529,151445338,151446426,151451606,151454895,151456578,151457761,151458811,151460000,151461138,151462242,151462412,151462884,151468000,151468641,151469711,151473964,151474857	151409939,151410527,151411338,151414919,151416688,151416901,151420379,151423042,151428922,151433228,151435580,151437003,151437351,151438746,151440127,151441991,151443329,151443709,151445445,151446575,151451705,151455159,151456620,151457963,151458910,151460119,151461289,151462322,151462466,151466120,151468146,151468756,151469864,151474072,151475388	Gene ID= ENSG00000080345.17 TPM= 1.45 Transcript Type= protein_coding
chr2	151409941	151482172	151409941	151482172	+	ENST00000243326.9@RIF1	ENST00000243326.9	protein_coding	151409941,151411260,151414823,151416561,151416807,151420190,151422950,151428784,151433077,151435463,151436827,151437241,151438684,151440027,151441905,151443259,151443529,151445338,151446426,151451606,151454895,151456578,151457761,151458811,151460000,151461138,151462242,151462412,151462884,151468000,151468474,151468641,151469711,151473964,151474857	151410527,151411338,151414919,151416688,151416901,151420379,151423042,151428922,151433228,151435580,151437003,151437351,151438746,151440127,151441991,151443329,151443709,151445445,151446575,151451705,151455159,151456620,151457963,151458910,151460119,151461289,151462322,151462466,151466120,151468146,151468551,151468756,151469864,151474072,151482172	Gene ID= ENSG00000080345.17 TPM= 2.41 Transcript Type= protein_coding
chr2	151664588	151734515	151664588	151734515	-	transcript4645.chr2.nic@NEB	transcript4645.chr2.nic	protein_coding	151734398,151733712,151733121,151729615,151727691,151725453,151724857,151724260,151723382,151717416,151710434,151709656,151706881,151697544,151697350,151697148,151696637,151695578,151694522,151694323,151692261,151692059,151691864,151690727,151688292,151687626,151687419,151684778,151682662,151680730,151679918,151679721,151677876,151677565,151675287,151674477,151672369,151671023,151669027,151667804,151666090,151665333,151664759,151664588	151734515,151733795,151733185,151729656,151727906,151725560,151724961,151724364,151723486,151717520,151710538,151709763,151706997,151697648,151697457,151697252,151696735,151695682,151694629,151694436,151692362,151692166,151691968,151690825,151688396,151687733,151687532,151684975,151682769,151680828,151680022,151679828,151678187,151677771,151675391,151674584,151672680,151671229,151669131,151667911,151666401,151665539,151664863,151664608	Gene ID= ENSG00000183091.19 TPM= 36.99 Transcript Type= NA
chr2	151730658	151734474	151730658	151734474	-	transcript4725.chr2.nnic@NA	transcript4725.chr2.nnic	NA	151730658	151734474	Gene ID= novel_gene_chr2_4726 TPM= 9.65 Transcript Type= NA
chr2	151826224	151828472	151826224	151828472	-	transcript4742.chr2.nnic@ARL5A	transcript4742.chr2.nnic	protein_coding	151828131,151826224	151828472,151827799	Gene ID= ENSG00000162980.16 TPM= 3.86 Transcript Type= NA
chr2	151798802	151828488	151798802	151828488	-	ENST00000295087.12@ARL5A	ENST00000295087.12	protein_coding	151828131,151815139,151814169,151812357,151806821,151798802	151828488,151815199,151814316,151812440,151806972,151803324	Gene ID= ENSG00000162980.16 TPM= 4.83 Transcript Type= protein_coding
chr2	152116801	152175992	152116801	152175992	-	ENST00000263904.4@STAM2	ENST00000263904.4	protein_coding	152175603,152150145,152148225,152148024,152147162,152144888,152143827,152135509,152133402,152133173,152132114,152126226,152123766,152116801	152175992,152150229,152148300,152148122,152147308,152144957,152144013,152135603,152133484,152133260,152132168,152126379,152123935,152120802	Gene ID= ENSG00000115145.9 TPM= 9.65 Transcript Type= protein_coding
chr2	152335097	152618932	152335097	152618932	+	transcript4752.chr2.nic@FMNL2	transcript4752.chr2.nic	protein_coding	152335097,152521943,152542739,152549021,152558740,152560883,152575136,152578888,152580956,152607339,152611495,152614851,152617091,152618846	152335720,152522026,152542819,152549097,152558823,152561035,152575244,152578964,152581049,152607413,152611605,152615000,152617192,152618932	Gene ID= ENSG00000157827.19 TPM= 1.93 Transcript Type= NA
chr2	152655329	152717433	152655329	152717433	-	transcript4759.chr2.nic@PRPF40A	transcript4759.chr2.nic	protein_coding	152717230,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672459,152671273,152670231,152669137,152664138,152663876,152663655,152663035,152662603,152659270,152659093,152658948,152657889,152655329	152717433,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623,152671381,152670381,152669270,152664252,152663967,152663771,152663172,152662698,152659356,152659189,152659009,152658020,152656398	Gene ID= ENSG00000196504.15 TPM= 2.9 Transcript Type= NA
chr2	152672565	152717900	152672565	152717900	-	transcript4764.chr2.nic@PRPF40A	transcript4764.chr2.nic	protein_coding	152717831,152717356,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672565	152717900,152717625,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623	Gene ID= ENSG00000196504.15 TPM= 22.2 Transcript Type= NA
chr2	152651593	152717981	152651593	152717981	-	ENST00000410080.5@PRPF40A	ENST00000410080.5	protein_coding	152717356,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672459,152671273,152670231,152669137,152664138,152663876,152663655,152663035,152662603,152659270,152659093,152658948,152657889,152651593	152717981,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623,152671381,152670381,152669270,152664252,152663967,152663771,152663172,152662698,152659356,152659189,152659009,152658020,152656398	Gene ID= ENSG00000196504.15 TPM= 1.93 Transcript Type= protein_coding
chr2	152672565	152717407	152672565	152717407	-	ENST00000545856.5@PRPF40A	ENST00000545856.5	protein_coding	152717230,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672565	152717407,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623	Gene ID= ENSG00000196504.15 TPM= 5.79 Transcript Type= protein_coding
chr2	156341454	156342317	156341454	156342317	-	transcript4773.chr2.nnic@NA	transcript4773.chr2.nnic	NA	156341454	156342317	Gene ID= novel_gene_chr2_4774 TPM= 2.9 Transcript Type= NA
chr2	156436366	156586404	156436366	156586404	+	transcript4777.chr2.nnic@GPD2	transcript4777.chr2.nnic	protein_coding	156436366,156476098,156496044,156510796,156512220,156513333,156549608,156550602,156557389,156568825,156569363,156570087,156571134,156578889,156579086,156579690,156582793,156584894	156436513,156476207,156496215,156510920,156512317,156513496,156549772,156550746,156557582,156568959,156569538,156570218,156571292,156579001,156579164,156579788,156582914,156586404	Gene ID= ENSG00000115159.15 TPM= 1.93 Transcript Type= NA
chr2	157736449	157876235	157736449	157876235	-	transcript4785.chr2.nnic@ACVR1	transcript4785.chr2.nnic	protein_coding	157875796,157826528,157819403,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876235,157826646,157819489,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 2.94 Transcript Type= NA
chr2	157736449	157876090	157736449	157876090	-	transcript4786.chr2.nic@ACVR1	transcript4786.chr2.nic	protein_coding	157875796,157819403,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876090,157819489,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 2.94 Transcript Type= NA
chr2	157736449	157876085	157736449	157876085	-	transcript4791.chr2.nnic@ACVR1	transcript4791.chr2.nnic	protein_coding	157875796,157818269,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876085,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 2.7 Transcript Type= NA
chr2	157736449	157876075	157736449	157876075	-	transcript4792.chr2.nnic@ACVR1	transcript4792.chr2.nnic	protein_coding	157875742,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876075,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 5.84 Transcript Type= NA
chr2	157736449	157751439	157736449	157751439	-	transcript4799.chr2.nnic@ACVR1	transcript4799.chr2.nnic	protein_coding	157751233,157738440,157736449	157751439,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 5.79 Transcript Type= NA
chr2	157736449	157875862	157736449	157875862	-	ENST00000434821.5@ACVR1	ENST00000434821.5	protein_coding	157875796,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157875862,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 3.91 Transcript Type= protein_coding
chr2	158457899	158663003	158457899	158663003	+	transcript4801.chr2.nic@PKP4	transcript4801.chr2.nic	protein_coding	158457899,158533180,158533438,158577271,158603070,158620990,158621231,158624878,158631753,158634070,158640627,158642486,158658131,158661333,158662897	158458307,158533316,158533534,158577383,158603104,158621121,158621421,158625427,158631941,158634289,158640759,158642699,158658314,158661450,158663003	Gene ID= ENSG00000144283.21 TPM= 3.86 Transcript Type= NA
chr2	158662242	158681426	158662242	158681426	+	ENST00000480171.7@PKP4	ENST00000480171.7	protein_coding	158662242,158663272,158666413,158669720,158673677,158673883,158676739,158678581,158680429	158663088,158663445,158666563,158669915,158673761,158674000,158676867,158678654,158681426	Gene ID= ENSG00000144283.21 TPM= 1.93 Transcript Type= retained_intron
chr2	159235801	159286722	159235801	159286722	-	transcript4809.chr2.nnic@WDSUB1	transcript4809.chr2.nnic	protein_coding	159286583,159282672,159279761,159275546,159259810,159257945,159257758,159256196,159248372,159235801	159286722,159283093,159279945,159275638,159259843,159257985,159257864,159256375,159248512,159236190	Gene ID= ENSG00000196151.10 TPM= 2.9 Transcript Type= NA
chr2	159235801	159286722	159235801	159286722	-	transcript4816.chr2.nnic@WDSUB1	transcript4816.chr2.nnic	protein_coding	159286583,159282672,159256196,159248372,159235801	159286722,159283093,159256375,159248512,159236190	Gene ID= ENSG00000196151.10 TPM= 2.9 Transcript Type= NA
chr2	159712507	159768573	159712507	159768573	+	transcript4822.chr2.nnic@MARCH7	transcript4822.chr2.nnic	protein_coding	159712507,159714557,159715533,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159764626,159767284	159712661,159714598,159715631,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159764674,159768573	Gene ID= ENSG00000136536.14 TPM= 6.76 Transcript Type= NA
chr2	159712469	159768573	159712469	159768573	+	transcript4828.chr2.nic@MARCH7	transcript4828.chr2.nic	protein_coding	159712469,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159764626,159767284	159712661,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159764674,159768573	Gene ID= ENSG00000136536.14 TPM= 145.76 Transcript Type= NA
chr2	159712499	159771027	159712499	159771027	+	ENST00000259050.8@MARCH7	ENST00000259050.8	protein_coding	159712499,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159764626,159767284	159712606,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159764674,159771027	Gene ID= ENSG00000136536.14 TPM= 1.93 Transcript Type= protein_coding
chr2	159768853	159798242	159768853	159798242	-	ENST00000259053.5@CD302	ENST00000259053.5	protein_coding	159798132,159783359,159780882,159780005,159777938,159768853	159798242,159783469,159780998,159780178,159777964,159772053	Gene ID= ENSG00000241399.6 TPM= 1.93 Transcript Type= protein_coding
chr2	160257719	160270471	160257719	160270471	-	transcript4848.chr2.nnic@ITGB6	transcript4848.chr2.nnic	protein_coding	160270202,160257719	160270471,160258046	Gene ID= ENSG00000115221.10 TPM= 7.72 Transcript Type= NA
chr2	160274518	160407895	160274518	160407895	-	transcript4851.chr2.nic@RBMS1	transcript4851.chr2.nic	protein_coding	160407464,160367216,160318169,160313156,160303330,160300651,160286978,160284995,160284775,160282257,160281314,160278548,160277303,160275630,160274518	160407895,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160282304,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 1.93 Transcript Type= NA
chr2	160274518	160407976	160274518	160407976	-	transcript4852.chr2.nic@RBMS1	transcript4852.chr2.nic	protein_coding	160407464,160367216,160318169,160313156,160303330,160300651,160286969,160284995,160284775,160281314,160278548,160277303,160275630,160274518	160407976,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 6.76 Transcript Type= NA
chr2	160274520	160407889	160274520	160407889	-	ENST00000409972.5@RBMS1	ENST00000409972.5	protein_coding	160407464,160367216,160318169,160313156,160303330,160300651,160286978,160284995,160284775,160281314,160278548,160277303,160275630,160274520	160407889,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 11.58 Transcript Type= protein_coding
chr2	161160384	161236172	161160384	161236172	+	transcript4857.chr2.nic@TANK	transcript4857.chr2.nic	protein_coding	161160384,161161285,161179614,161203487,161204675,161223915,161224631,161230971,161235342	161160486,161161412,161179761,161203595,161204793,161223991,161224746,161231551,161236172	Gene ID= ENSG00000136560.13 TPM= 8.04 Transcript Type= NA
chr2	161136908	161236187	161136908	161236187	+	ENST00000259075.6@TANK	ENST00000259075.6	protein_coding	161136908,161179614,161203487,161204675,161223915,161224631,161230971,161235342	161137063,161179761,161203595,161204793,161223991,161224746,161231551,161236187	Gene ID= ENSG00000136560.13 TPM= 1.28 Transcript Type= protein_coding
chr2	161160297	161236172	161160297	161236172	+	ENST00000392749.6@TANK	ENST00000392749.6	protein_coding	161160297,161179614,161203487,161204675,161223915,161224631,161230971,161235342	161160486,161179761,161203595,161204793,161223991,161224746,161231551,161236172	Gene ID= ENSG00000136560.13 TPM= 45.69 Transcript Type= protein_coding
chr2	161308038	161411717	161308038	161411717	+	ENST00000409682.7@PSMD14	ENST00000409682.7	protein_coding	161308038,161316437,161318822,161367478,161367784,161370107,161371172,161385464,161391104,161395078,161408837,161411302	161308604,161316569,161318873,161367549,161367903,161370177,161371322,161385571,161391178,161395203,161408899,161411717	Gene ID= ENSG00000115233.11 TPM= 225.64 Transcript Type= protein_coding
chr2	161308436	161373186	161308436	161373186	+	transcript4877.chr2.nnic@PSMD14	transcript4877.chr2.nnic	protein_coding	161308436,161316437,161318822,161367478,161367784,161370107,161371172,161371996	161308604,161316569,161318873,161367549,161367903,161370177,161371322,161373186	Gene ID= ENSG00000115233.11 TPM= 6.76 Transcript Type= NA
chr2	162344088	162361420	162344088	162361420	+	ENST00000437150.6@GCA	ENST00000437150.6	protein_coding	162344088,162347578,162352338,162356438,162356758,162359044,162359494,162360217	162344275,162347742,162352407,162356481,162356905,162359157,162359552,162361420	Gene ID= ENSG00000115271.10 TPM= 1.93 Transcript Type= protein_coding
chr2	164492816	164621848	164492816	164621848	-	ENST00000263915.7@GRB14	ENST00000263915.7	protein_coding	164621119,164619687,164547660,164527014,164525004,164521980,164508742,164508455,164502255,164497374,164497211,164497008,164494431,164492816	164621848,164619819,164547816,164527135,164525078,164522117,164508852,164508550,164502335,164497490,164497283,164497095,164494524,164493182	Gene ID= ENSG00000115290.9 TPM= 7.72 Transcript Type= protein_coding
chr2	165873362	165953843	165873362	165953843	-	ENST00000243344.7@TTC21B	ENST00000243344.7	protein_coding	165953685,165949595,165949394,165945524,165943219,165941027,165932973,165931758,165930172,165929650,165929135,165924549,165919276,165917257,165915201,165913574,165912514,165911327,165907678,165901722,165899770,165898686,165890838,165890479,165888279,165883794,165880679,165876165,165873362	165953843,165949724,165949504,165945690,165943341,165941184,165933057,165931856,165930364,165929747,165929335,165924678,165919433,165917481,165915439,165913646,165912624,165911465,165907784,165901910,165899880,165898767,165890988,165890640,165888474,165884018,165880799,165876232,165874832	Gene ID= ENSG00000123607.14 TPM= 4.83 Transcript Type= protein_coding
chr2	167187234	167249057	167187234	167249057	+	transcript4918.chr2.nic@XIRP2	transcript4918.chr2.nic	protein_coding	167187234,167210735,167218166,167239855,167240664,167241777,167242569	167187531,167210895,167218300,167239965,167240736,167241910,167249057	Gene ID= ENSG00000163092.19 TPM= 102.25 Transcript Type= NA
chr2	166888487	167259753	166888487	167259753	+	ENST00000409195.5@XIRP2	ENST00000409195.5	protein_coding	166888487,166903465,167135909,167210735,167218166,167239855,167240664,167241777,167242569,167254032,167257857	166888557,166903890,167136062,167210895,167218300,167239965,167240736,167241910,167251947,167254165,167259753	Gene ID= ENSG00000163092.19 TPM= 136.35 Transcript Type= protein_coding
chr2	167250778	167260313	167250778	167260313	+	transcript4935.chr2.nic@XIRP2	transcript4935.chr2.nic	protein_coding	167250778,167254032,167257857	167251947,167254165,167260313	Gene ID= ENSG00000163092.19 TPM= 13.51 Transcript Type= NA
chr2	167187372	167191210	167187372	167191210	+	transcript4952.chr2.nnic@NA	transcript4952.chr2.nnic	NA	167187372	167191210	Gene ID= novel_gene_chr2_4953 TPM= 10.62 Transcript Type= NA
chr2	167954020	168248141	167954020	168248141	-	ENST00000355999.4@STK39	ENST00000355999.4	protein_coding	168247228,168181978,168167299,168163739,168161787,168140649,168140289,168138088,168129710,168129541,168075109,168074982,168065319,168063500,168017043,168012634,167964662,167954020	168248141,168182090,168167407,168163880,168161842,168140758,168140390,168138221,168129758,168129606,168075231,168075011,168065381,168063570,168017095,168012702,167964726,167955570	Gene ID= ENSG00000198648.10 TPM= 3.86 Transcript Type= protein_coding
chr2	167954020	168247591	167954020	168247591	-	transcript4969.chr2.nnic@STK39	transcript4969.chr2.nnic	protein_coding	168247228,168181978,168167299,168163739,168161787,168140649,168140289,168138088,168129710,168129541,168075109,168074982,168063500,168017043,168012634,167964662,167954020	168247591,168182090,168167407,168163880,168161842,168140758,168140390,168138221,168129758,168129606,168075231,168075011,168063570,168017095,168012702,167964726,167955570	Gene ID= ENSG00000198648.10 TPM= 2.9 Transcript Type= NA
chr2	168456284	168459834	168456284	168459834	+	transcript4979.chr2.nnic@CERS6	transcript4979.chr2.nnic	protein_coding	168456284,168457720	168456618,168459834	Gene ID= ENSG00000172292.14 TPM= 3.86 Transcript Type= NA
chr2	168802418	168865514	168802418	168865514	+	ENST00000317647.11@NOSTRIN	ENST00000317647.11	protein_coding	168802418,168811567,168824634,168828158,168828420,168831472,168834227,168842992,168851084,168851279,168855352,168856690,168859512,168860795,168861960,168864834	168802673,168811652,168824717,168828220,168828501,168831534,168834325,168843117,168851182,168851404,168855460,168856778,168859637,168860909,168862049,168865514	Gene ID= ENSG00000163072.15 TPM= 1.93 Transcript Type= protein_coding
chr2	169479178	169506655	169479178	169506655	+	ENST00000295240.7@BBS5	ENST00000295240.7	protein_coding	169479178,169482251,169487069,169487806,169487987,169492874,169493741,169497627,169499486,169503095,169504303,169504481	169479612,169482333,169487134,169487855,169488114,169493009,169493836,169497689,169499620,169503178,169504326,169506655	Gene ID= ENSG00000163093.11 TPM= 11.58 Transcript Type= protein_coding
chr2	169479483	169506655	169479483	169506655	+	ENST00000392663.6@BBS5	ENST00000392663.6	protein_coding	169479483,169482251,169487069,169487806,169487987,169492874,169493741,169499486,169503095,169504303,169504481	169479612,169482333,169487134,169487855,169488114,169493009,169493836,169499620,169503178,169504326,169506655	Gene ID= ENSG00000163093.11 TPM= 12.55 Transcript Type= protein_coding
chr2	169509702	169526262	169509702	169526262	+	ENST00000284669.1@KLHL41	ENST00000284669.1	protein_coding	169509702,169514574,169514854,169518190,169520861,169525585	169510888,169514731,169514961,169518375,169521007,169526262	Gene ID= ENSG00000239474.6 TPM= 796.62 Transcript Type= protein_coding
chr2	169529749	169573873	169529749	169573873	-	ENST00000453153.6@FASTKD1	ENST00000453153.6	protein_coding	169573669,169571653,169569184,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169538013,169537227,169531352,169530587,169529749	169573873,169572171,169569252,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169538141,169537340,169531490,169530701,169529926	Gene ID= ENSG00000138399.17 TPM= 5.79 Transcript Type= protein_coding
chr2	169529749	169573862	169529749	169573862	-	transcript5029.chr2.nic@FASTKD1	transcript5029.chr2.nic	protein_coding	169573669,169571653,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169538013,169537227,169531352,169530587,169529749	169573862,169572171,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169538141,169537340,169531490,169530701,169529926	Gene ID= ENSG00000138399.17 TPM= 1.93 Transcript Type= NA
chr2	169529749	169573862	169529749	169573862	-	transcript5030.chr2.nic@FASTKD1	transcript5030.chr2.nic	protein_coding	169573669,169571653,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169538013,169531352,169530587,169529749	169573862,169572171,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169538141,169531490,169530701,169529926	Gene ID= ENSG00000138399.17 TPM= 1.93 Transcript Type= NA
chr2	169584340	169641406	169584340	169641406	+	ENST00000260970.7@PPIG	ENST00000260970.7	protein_coding	169584340,169603642,169604026,169604187,169606039,169607104,169608671,169614464,169614585,169630774,169631766,169633160,169636092,169636413	169584490,169603694,169604102,169604261,169606146,169607148,169608758,169614493,169614724,169630987,169631933,169633247,169636228,169641406	Gene ID= ENSG00000138398.15 TPM= 9.65 Transcript Type= protein_coding
chr2	169584353	169630966	169584353	169630966	+	transcript5041.chr2.nnic@PPIG	transcript5041.chr2.nnic	protein_coding	169584353,169592651,169603642,169604026,169604187,169606039,169607104,169608671,169614464,169614585,169630774	169584490,169592739,169603694,169604102,169604261,169606146,169607148,169608758,169614493,169614724,169630966	Gene ID= ENSG00000138398.15 TPM= 3.86 Transcript Type= NA
chr2	169733834	169735223	169733834	169735223	+	transcript5072.chr2.nic@KLHL23	transcript5072.chr2.nic	protein_coding	169733834,169735013	169734087,169735223	Gene ID= ENSG00000213160.9 TPM= 1.93 Transcript Type= NA
chr2	169798812	169812064	169798812	169812064	+	ENST00000260956.8@SSB	ENST00000260956.8	protein_coding	169798812,169800952,169805474,169805665,169806785,169806971,169808482,169808860,169810283,169810858,169811183,169811668	169798976,169801026,169805577,169805839,169806892,169807071,169808553,169808902,169810423,169811044,169811323,169812064	Gene ID= ENSG00000138385.15 TPM= 31.86 Transcript Type= protein_coding
chr2	169798859	169812064	169798859	169812064	+	transcript5051.chr2.nic@SSB	transcript5051.chr2.nic	protein_coding	169798859,169800952,169805474,169805665,169808482,169808860,169810283,169810858,169811183,169811668	169798976,169801026,169805577,169807071,169808553,169808902,169810423,169811044,169811323,169812064	Gene ID= ENSG00000138385.15 TPM= 1.93 Transcript Type= NA
chr2	169791963	169824941	169791963	169824941	-	transcript5052.chr2.nnic@METTL5	transcript5052.chr2.nnic	protein_coding	169824782,169824489,169821943,169821092,169819561,169815477,169812457,169801917,169791963	169824941,169824640,169822057,169821273,169819643,169815528,169812506,169802014,169793807	Gene ID= ENSG00000138382.14 TPM= 1.93 Transcript Type= NA
chr2	169811757	169824914	169811757	169824914	-	ENST00000260953.9@METTL5	ENST00000260953.9	protein_coding	169824489,169821943,169821092,169819561,169815477,169812457,169811757	169824914,169822057,169821273,169819643,169815528,169812506,169811858	Gene ID= ENSG00000138382.14 TPM= 7.96 Transcript Type= protein_coding
chr2	169811757	169824941	169811757	169824941	-	transcript5059.chr2.nic@METTL5	transcript5059.chr2.nic	protein_coding	169824782,169824489,169821943,169819561,169815477,169812457,169811757	169824941,169824640,169822057,169819643,169815528,169812506,169811858	Gene ID= ENSG00000138382.14 TPM= 2.17 Transcript Type= NA
chr2	169811757	169824925	169811757	169824925	-	ENST00000409965.5@METTL5	ENST00000409965.5	protein_coding	169824782,169824489,169821943,169821092,169819561,169815477,169812457,169811757	169824925,169824640,169822057,169821273,169819643,169815528,169812506,169811858	Gene ID= ENSG00000138382.14 TPM= 27.27 Transcript Type= protein_coding
chr2	169811757	169824931	169811757	169824931	-	ENST00000392640.6@METTL5	ENST00000392640.6	protein_coding	169824868,169824489,169821943,169821092,169819561,169815477,169812457,169811757	169824931,169824640,169822057,169821273,169819643,169815528,169812506,169811858	Gene ID= ENSG00000138382.14 TPM= 27.27 Transcript Type= protein_coding
chr2	169827415	170084127	169827415	170084127	+	transcript5078.chr2.nnic@UBR3	transcript5078.chr2.nnic	protein_coding	169827415,169872236,169875791,169877494,169878525,169891165,169895181,169896507,169905114,169906031,169914060,169923929,169924084,169925619,169926692,169926838,169927320,169928727,169932912,169942493,169946288,169947542,169947905,169949605,169958438,169986645,169994323,170001304,170006990,170008804,170015281,170029346,170040882,170055460,170061079,170061318,170073428,170079814,170080545,170081726	169828052,169872375,169875949,169877637,169878574,169891231,169895311,169896735,169905293,169906164,169914146,169923994,169924173,169925747,169926744,169926971,169927405,169928868,169933008,169942634,169946392,169947715,169947937,169950065,169958526,169986794,169994456,170001414,170007190,170008940,170015366,170029448,170040985,170055584,170061186,170061443,170073607,170080023,170080684,170084127	Gene ID= ENSG00000144357.16 TPM= 27.4 Transcript Type= NA
chr2	169827415	169943767	169827415	169943767	+	transcript5102.chr2.nic@UBR3	transcript5102.chr2.nic	protein_coding	169827415,169872236,169875791,169877494,169878525,169891165,169895181,169896507,169905114,169906031,169914060,169923929,169924084,169925619,169926692,169926838,169927320,169928727,169932912,169942493	169828052,169872375,169875949,169877637,169878574,169891231,169895311,169896735,169905293,169906164,169914146,169923994,169924173,169925747,169926744,169926971,169927405,169928868,169933008,169943767	Gene ID= ENSG00000144357.16 TPM= 3.96 Transcript Type= NA
chr2	169827458	170084131	169827458	170084131	+	ENST00000272793.9@UBR3	ENST00000272793.9	protein_coding	169827458,169872236,169875791,169877494,169878525,169891165,169895181,169896507,169905114,169906031,169914060,169923929,169924084,169925619,169926692,169926838,169927320,169928729,169932912,169942493,169946288,169947542,169949605,169958438,169986645,169994323,170001304,170006990,170008804,170015281,170029346,170040882,170055460,170061079,170061318,170073428,170079814,170080545,170081726	169828052,169872375,169875949,169877637,169878574,169891231,169895311,169896735,169905293,169906164,169914146,169923994,169924173,169925747,169926744,169926971,169927407,169928868,169933008,169942634,169946392,169947715,169950065,169958526,169986794,169994456,170001414,170007190,170008940,170015366,170029448,170040985,170055584,170061186,170061443,170073607,170080023,170080684,170084131	Gene ID= ENSG00000144357.16 TPM= 12.67 Transcript Type= protein_coding
chr2	169827508	170084127	169827508	170084127	+	ENST00000418381.5@UBR3	ENST00000418381.5	protein_coding	169827508,169872236,169875791,169877494,169878525,169891165,169895181,169896507,169905114,169906031,169914060,169923929,169924084,169925619,169926692,169926838,169927320,169928727,169932912,169942493,169946288,169947542,169949605,169958438,169986645,169994323,170001304,170006990,170008804,170015281,170029346,170040882,170055460,170061079,170061318,170073428,170079814,170080545,170081726	169828052,169872375,169875949,169877637,169878574,169891231,169895311,169896735,169905293,169906164,169914146,169923994,169924173,169925747,169926744,169926971,169927405,169928868,169933008,169942634,169946392,169947715,169950065,169958526,169986794,169994456,170001414,170007190,170008940,170015366,170029448,170040985,170055584,170061186,170061443,170073607,170080023,170080684,170084127	Gene ID= ENSG00000144357.16 TPM= 9.78 Transcript Type= protein_coding
chr2	170928526	170967129	170928526	170967129	+	ENST00000234160.4@GORASP2	ENST00000234160.4	protein_coding	170928526,170948350,170949539,170950204,170951328,170954650,170956436,170961663,170962839,170965790	170929403,170948430,170949742,170950290,170951458,170954782,170956559,170961749,170962946,170967129	Gene ID= ENSG00000115806.12 TPM= 22.2 Transcript Type= protein_coding
chr2	171517270	171517716	171517270	171517716	-	ENST00000433675.1@AC007969.1	ENST00000433675.1	processed_pseudogene	171517270	171517716	Gene ID= ENSG00000233762.3 TPM= 106.18 Transcript Type= processed_pseudogene
chr2	171522348	171558133	171522348	171558133	+	ENST00000321348.8@CYBRD1	ENST00000321348.8	protein_coding	171522348,171541585,171553346,171554524	171522738,171541793,171553500,171558133	Gene ID= ENSG00000071967.11 TPM= 12.55 Transcript Type= protein_coding
chr2	171687409	171748411	171687409	171748411	+	ENST00000340296.8@DYNC1I2	ENST00000340296.8	protein_coding	171687409,171690147,171692777,171707287,171715328,171725618,171725919,171726194,171726791,171727821,171728305,171728717,171729709,171744049,171745802,171747776	171687627,171690263,171692894,171707377,171715443,171725713,171726081,171726293,171726916,171727967,171728418,171728850,171729853,171744189,171745927,171748411	Gene ID= ENSG00000077380.15 TPM= 16.89 Transcript Type= protein_coding
chr2	171687672	171748411	171687672	171748411	+	ENST00000409197.5@DYNC1I2	ENST00000409197.5	protein_coding	171687672,171690147,171692777,171707287,171715328,171725618,171725919,171726194,171726791,171727821,171728305,171728717,171729709,171744049,171745802,171747776	171687873,171690263,171692894,171707377,171715443,171725713,171726081,171726293,171726916,171727967,171728418,171728850,171729853,171744189,171745927,171748411	Gene ID= ENSG00000077380.15 TPM= 30.41 Transcript Type= protein_coding
chr2	171781400	171785102	171781400	171785102	-	transcript5163.chr2.nnic@NA	transcript5163.chr2.nnic	NA	171781400	171785102	Gene ID= novel_gene_chr2_5164 TPM= 1.93 Transcript Type= NA
chr2	171784778	171894404	171784778	171894404	-	transcript5160.chr2.nnic@SLC25A12	transcript5160.chr2.nnic	protein_coding	171894203,171893205,171868681,171855834,171844369,171837121,171834727,171833963,171826798,171815121,171813339,171810224,171809606,171793627,171791451,171787789,171784778	171894404,171893258,171868823,171855949,171844508,171837267,171834865,171834056,171826882,171815202,171813497,171810276,171809686,171793767,171791589,171787947,171785475	Gene ID= ENSG00000115840.13 TPM= 3.86 Transcript Type= NA
chr2	171784370	171894252	171784370	171894252	-	ENST00000422440.6@SLC25A12	ENST00000422440.6	protein_coding	171894203,171893205,171868681,171855834,171844369,171837121,171834727,171833963,171826798,171815121,171813339,171810224,171809606,171793627,171791451,171787789,171787571,171784370	171894252,171893258,171868823,171855949,171844508,171837267,171834865,171834056,171826882,171815202,171813497,171810276,171809686,171793767,171791589,171787947,171787661,171785475	Gene ID= ENSG00000115840.13 TPM= 33.79 Transcript Type= protein_coding
chr2	171922466	171983623	171922466	171983623	+	transcript5166.chr2.nnic@HAT1	transcript5166.chr2.nnic	protein_coding	171922466,171922922,171925537,171946708,171952881,171965338,171965787,171966409,171966843,171976157,171979247,171983185	171922507,171923117,171925641,171946783,171953001,171965517,171965908,171966513,171966949,171976308,171979363,171983623	Gene ID= ENSG00000128708.12 TPM= 1.93 Transcript Type= NA
chr2	171922465	171983682	171922465	171983682	+	ENST00000264108.4@HAT1	ENST00000264108.4	protein_coding	171922465,171925537,171946708,171952881,171965338,171965787,171966409,171966843,171976157,171979247,171983185	171922507,171925641,171946783,171953001,171965517,171965908,171966513,171966949,171976308,171979363,171983682	Gene ID= ENSG00000128708.12 TPM= 24.13 Transcript Type= protein_coding
chr2	171999583	172082430	171999583	172082430	+	ENST00000315796.4@METAP1D	ENST00000315796.4	protein_coding	171999583,172061498,172063711,172065604,172066264,172070907,172077797,172079215,172080128,172080328	172000009,172061655,172063860,172065752,172066306,172071070,172077894,172079262,172080206,172082430	Gene ID= ENSG00000172878.13 TPM= 12.55 Transcript Type= protein_coding
chr2	171999942	172082426	171999942	172082426	+	transcript5179.chr2.nic@METAP1D	transcript5179.chr2.nic	protein_coding	171999942,172061498,172063711,172065604,172066264,172070907,172077797,172079215,172080128	172000009,172061655,172063860,172065752,172066306,172071070,172077894,172079262,172082426	Gene ID= ENSG00000172878.13 TPM= 3.86 Transcript Type= NA
chr2	172427555	172506230	172427555	172506230	+	ENST00000264107.11@ITGA6	ENST00000264107.11	protein_coding	172427555,172465539,172467481,172469125,172470974,172474055,172474929,172475597,172476395,172479641,172479990,172484782,172485121,172487023,172487264,172487547,172487728,172487961,172488126,172489485,172491024,172491221,172491425,172497975,172501772,172504091	172427970,172465663,172467560,172469380,172471105,172474265,172475122,172475685,172476513,172479739,172480051,172484942,172485264,172487138,172487453,172487630,172487807,172488038,172488228,172489658,172491122,172491331,172491523,172498100,172501901,172506230	Gene ID= ENSG00000091409.14 TPM= 5.79 Transcript Type= protein_coding
chr2	172555969	172608669	172555969	172608669	+	ENST00000282077.7@PDK1	ENST00000282077.7	protein_coding	172555969,172558708,172562220,172564503,172564978,172566856,172568741,172570726,172586278,172592935,172595829	172556346,172558849,172562291,172564687,172565073,172566933,172568817,172570824,172586388,172593048,172608669	Gene ID= ENSG00000152256.13 TPM= 2.9 Transcript Type= protein_coding
chr2	173074677	173077245	173074677	173077245	-	transcript5232.chr2.nnic@NA	transcript5232.chr2.nnic	NA	173077133,173076833,173074677	173077245,173076919,173076625	Gene ID= novel_gene_chr2_5233 TPM= 14.48 Transcript Type= NA
chr2	173075435	173222204	173075435	173222204	+	ENST00000539448.5@MAP3K20	ENST00000539448.5	protein_coding	173075435,173090998,173169805,173182854,173187558,173190895,173191040,173198026,173203796,173209729,173217115,173221150	173075670,173091190,173169892,173182955,173187623,173190923,173191177,173198112,173203870,173209835,173217250,173222204	Gene ID= ENSG00000091436.16 TPM= 5.15 Transcript Type= protein_coding
chr2	173090643	173222204	173090643	173222204	+	transcript5205.chr2.nic@MAP3K20	transcript5205.chr2.nic	protein_coding	173090643,173090998,173169805,173182854,173187558,173190895,173191040,173198026,173203796,173209729,173217115,173221150	173090830,173091190,173169892,173182955,173187623,173190923,173191177,173198112,173203870,173209835,173217250,173222204	Gene ID= ENSG00000091436.16 TPM= 87.2 Transcript Type= NA
chr2	173075842	173227146	173075842	173227146	+	ENST00000338983.7@MAP3K20	ENST00000338983.7	protein_coding	173075842,173090998,173169805,173182854,173187558,173190895,173191040,173198026,173203796,173209729,173217115,173221150	173076002,173091190,173169892,173182955,173187623,173190923,173191177,173198112,173203870,173209835,173217250,173227146	Gene ID= ENSG00000091436.16 TPM= 50.51 Transcript Type= protein_coding
chr2	173354820	173368904	173354820	173368904	+	ENST00000347703.7@CDCA7	ENST00000347703.7	protein_coding	173354820,173358712,173363226,173363818,173364795,173365452,173366283,173367150,173367634	173354984,173358837,173363462,173363895,173364989,173365592,173366432,173367286,173368904	Gene ID= ENSG00000144354.13 TPM= 3.86 Transcript Type= protein_coding
chr2	173354861	173368997	173354861	173368997	+	ENST00000306721.7@CDCA7	ENST00000306721.7	protein_coding	173354861,173358712,173359255,173363226,173363818,173364795,173365452,173366283,173367150,173367634	173354984,173358837,173359491,173363462,173363895,173364989,173365592,173366432,173367286,173368997	Gene ID= ENSG00000144354.13 TPM= 2.9 Transcript Type= protein_coding
chr2	173906459	173965702	173906459	173965702	-	ENST00000310015.10@SP3	ENST00000310015.10	protein_coding	173965165,173964405,173963761,173954873,173918593,173913070,173906459	173965702,173964553,173963883,173956232,173918785,173913266,173910257	Gene ID= ENSG00000172845.14 TPM= 1.93 Transcript Type= protein_coding
chr2	173908530	173964738	173908530	173964738	-	transcript5249.chr2.nic@SP3	transcript5249.chr2.nic	protein_coding	173964405,173963761,173954873,173918593,173913070,173908530	173964738,173963883,173956232,173918785,173913266,173910257	Gene ID= ENSG00000172845.14 TPM= 10.62 Transcript Type= NA
chr2	174075008	174248594	174075008	174248594	-	transcript5255.chr2.nnic@OLA1	transcript5255.chr2.nnic	protein_coding	174248452,174246715,174229308,174223033,174141825,174123595,174123180,174081924,174081152,174078968,174075008	174248594,174246815,174229451,174223160,174142000,174123675,174123277,174082001,174081248,174079090,174075527	Gene ID= ENSG00000138430.15 TPM= 3.86 Transcript Type= NA
chr2	174072447	174248698	174072447	174248698	-	ENST00000284719.7@OLA1	ENST00000284719.7	protein_coding	174248452,174246715,174229308,174223033,174141825,174123595,174123180,174081924,174081152,174078968,174072447	174248698,174246815,174229451,174223160,174142000,174123675,174123277,174082064,174081248,174079090,174075527	Gene ID= ENSG00000138430.15 TPM= 138.04 Transcript Type= protein_coding
chr2	174075008	174248599	174075008	174248599	-	ENST00000344357.9@OLA1	ENST00000344357.9	protein_coding	174248452,174229308,174223033,174141825,174123595,174123180,174081924,174081152,174078968,174075008	174248599,174229451,174223160,174142000,174123675,174123277,174082064,174081248,174079090,174075527	Gene ID= ENSG00000138430.15 TPM= 14.48 Transcript Type= protein_coding
chr2	174348022	174395715	174348022	174395715	-	ENST00000342016.7@CIR1	ENST00000342016.7	protein_coding	174395551,174387685,174381704,174380804,174380651,174380202,174378923,174351619,174350660,174348022	174395715,174387779,174381777,174380814,174380715,174380250,174379040,174351725,174350745,174349172	Gene ID= ENSG00000138433.15 TPM= 14.48 Transcript Type= protein_coding
chr2	174434152	174487094	174434152	174487094	-	ENST00000392551.6@GPR155	ENST00000392551.6	protein_coding	174486873,174482873,174481497,174472965,174470390,174468912,174466544,174465785,174461588,174461402,174459878,174453737,174446611,174445081,174442119,174439898,174434152	174487094,174482918,174481987,174473364,174470555,174469067,174466627,174465902,174461672,174461492,174460088,174453841,174446747,174445176,174442183,174440035,174436416	Gene ID= ENSG00000163328.13 TPM= 1.93 Transcript Type= protein_coding
chr2	174747592	174764472	174747592	174764472	-	ENST00000348749.9@CHRNA1	ENST00000348749.9	protein_coding	174764352,174759488,174759331,174757566,174754219,174753503,174749946,174748580,174747592	174764472,174759633,174759375,174757675,174754414,174753740,174750169,174748819,174748255	Gene ID= ENSG00000138435.15 TPM= 40.54 Transcript Type= protein_coding
chr2	175072250	175168206	175072250	175168206	-	ENST00000264110.6@ATF2	ENST00000264110.6	protein_coding	175168050,175151060,175136412,175130138,175121444,175118251,175117990,175114690,175113994,175111568,175097444,175093061,175080660,175072250	175168206,175151158,175136486,175130207,175121540,175118369,175118118,175114868,175114108,175111654,175097593,175093267,175080765,175074835	Gene ID= ENSG00000115966.16 TPM= 3.86 Transcript Type= protein_coding
chr2	175072250	175168206	175072250	175168206	-	ENST00000345739.9@ATF2	ENST00000345739.9	protein_coding	175168050,175151060,175136412,175130138,175118251,175117990,175114690,175113994,175111568,175097444,175093061,175080660,175072250	175168206,175151158,175136486,175130207,175118369,175118118,175114868,175114108,175111654,175097593,175093267,175080765,175074835	Gene ID= ENSG00000115966.16 TPM= 3.86 Transcript Type= protein_coding
chr2	175176258	175184607	175176258	175184607	-	ENST00000284727.8@ATP5G3	ENST00000284727.8	protein_coding	175181656,175181355,175180098,175179057,175176258	175184607,175181466,175180178,175179250,175178402	Gene ID= ENSG00000154518.9 TPM= 22.68 Transcript Type= protein_coding
chr2	175178067	175181710	175178067	175181710	-	ENST00000409194.5@ATP5G3	ENST00000409194.5	protein_coding	175181656,175181355,175180098,175179057,175178067	175181710,175181483,175180178,175179250,175178402	Gene ID= ENSG00000154518.9 TPM= 2.41 Transcript Type= protein_coding
chr2	175178145	175181663	175178145	175181663	-	ENST00000392541.3@ATP5G3	ENST00000392541.3	protein_coding	175181355,175180098,175179057,175178145	175181663,175180178,175179250,175178402	Gene ID= ENSG00000154518.9 TPM= 54.54 Transcript Type= protein_coding
chr2	175927760	176002282	175927760	176002282	-	transcript5322.chr2.nnic@LNPK	transcript5322.chr2.nnic	protein_coding	176002160,175995558,175993182,175992231,175979810,175970764,175964506,175964372,175947480,175939552,175938313,175937344,175935708,175927760	176002282,175995646,175993223,175992418,175979868,175970804,175964589,175964423,175947692,175939657,175938383,175937514,175935790,175930199	Gene ID= ENSG00000144320.13 TPM= 3.38 Transcript Type= NA
chr2	175923892	176002345	175923892	176002345	-	ENST00000272748.8@LNPK	ENST00000272748.8	protein_coding	176002160,175995558,175993182,175992231,175979810,175970764,175964506,175964372,175947480,175939552,175938313,175937344,175923892	176002345,175995646,175993223,175992418,175979868,175970804,175964589,175964423,175947692,175939657,175938383,175937514,175930199	Gene ID= ENSG00000144320.13 TPM= 14 Transcript Type= protein_coding
chr2	176122720	176124937	176122720	176124937	+	ENST00000249499.7@HOXD9	ENST00000249499.7	protein_coding	176122720,176123934	176123585,176124937	Gene ID= ENSG00000128709.12 TPM= 7.72 Transcript Type= protein_coding
chr2	176134606	176137098	176134606	176137098	-	ENST00000426965.1@HOXD-AS2	ENST00000426965.1	antisense_RNA	176136621,176135319,176134606	176137098,176135422,176134950	Gene ID= ENSG00000237380.6 TPM= 1.93 Transcript Type= antisense_RNA
chr2	176127825	176129507	176127825	176129507	-	transcript5361.chr2.nnic@NA	transcript5361.chr2.nnic	NA	176127825	176129507	Gene ID= novel_gene_chr2_5362 TPM= 1.93 Transcript Type= NA
chr2	176129557	176132364	176129557	176132364	+	transcript5356.chr2.nnic@HOXD8	transcript5356.chr2.nnic	protein_coding	176129557,176131320	176129774,176132364	Gene ID= ENSG00000175879.8 TPM= 3.86 Transcript Type= NA
chr2	176200908	176201252	176200908	176201252	-	ENST00000405359.2@AC016739.1	ENST00000405359.2	processed_pseudogene	176200908	176201252	Gene ID= ENSG00000218175.2 TPM= 6.76 Transcript Type= processed_pseudogene
chr2	176269395	176338025	176269395	176338025	+	ENST00000420864.5@MTX2	ENST00000420864.5	protein_coding	176269395,176270216,176296860,176297849,176323392,176326825,176328293,176328874,176329301,176330584,176337493	176269669,176270419,176296907,176297895,176323464,176326901,176328385,176328912,176329426,176330660,176338025	Gene ID= ENSG00000128654.13 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr2	176269419	176338025	176269419	176338025	+	ENST00000249442.10@MTX2	ENST00000249442.10	protein_coding	176269419,176296860,176297849,176323392,176326825,176328293,176328874,176329301,176330584,176337493	176269669,176296907,176297895,176323464,176326901,176328385,176328912,176329426,176330660,176338025	Gene ID= ENSG00000128654.13 TPM= 8.69 Transcript Type= protein_coding
chr2	176269416	176337935	176269416	176337935	+	transcript5371.chr2.nnic@MTX2	transcript5371.chr2.nnic	protein_coding	176269416,176296860,176297849,176326825,176328293,176328874,176329301,176330584,176337493	176269669,176296907,176297895,176326901,176328385,176328912,176329426,176330660,176337935	Gene ID= ENSG00000128654.13 TPM= 5.79 Transcript Type= NA
chr2	177212563	177220085	177212563	177220085	+	ENST00000392524.6@HNRNPA3	ENST00000392524.6	protein_coding	177212563,177215539,177215750,177215978,177216503,177216676,177216860,177217705,177219037,177219247,177219408	177212871,177215661,177215896,177216188,177216592,177216771,177216940,177217845,177219159,177219314,177220085	Gene ID= ENSG00000170144.20 TPM= 9.65 Transcript Type= protein_coding
chr2	177212741	177223957	177212741	177223957	+	transcript5382.chr2.nnic@HNRNPA3	transcript5382.chr2.nnic	protein_coding	177212741,177215539,177215750,177215978,177216503,177216676,177216860,177217705,177219037,177219247,177222060	177212871,177215661,177215896,177216188,177216592,177216771,177216940,177217845,177219159,177219314,177223957	Gene ID= ENSG00000170144.20 TPM= 1.93 Transcript Type= NA
chr2	177212749	177223958	177212749	177223958	+	ENST00000411529.6@HNRNPA3	ENST00000411529.6	protein_coding	177212749,177215539,177215750,177215978,177216503,177216676,177216860,177217705,177219037,177219247,177219408	177212805,177215661,177215896,177216188,177216592,177216771,177216940,177217845,177219159,177219314,177223958	Gene ID= ENSG00000170144.20 TPM= 6.76 Transcript Type= protein_coding
chr2	177212748	177223841	177212748	177223841	+	transcript5386.chr2.nnic@HNRNPA3	transcript5386.chr2.nnic	protein_coding	177212748,177215539,177215750,177215978,177216503,177216676,177216860,177217705,177219037,177219247,177222060	177212805,177215661,177215896,177216188,177216592,177216771,177216940,177217845,177219159,177219314,177223841	Gene ID= ENSG00000170144.20 TPM= 2.9 Transcript Type= NA
chr2	177230305	177265131	177230305	177265131	-	ENST00000397062.7@NFE2L2	ENST00000397062.7	protein_coding	177264532,177234005,177233250,177232392,177230305	177265131,177234271,177233339,177232583,177232008	Gene ID= ENSG00000116044.15 TPM= 138.04 Transcript Type= protein_coding
chr2	177263706	177265622	177263706	177265622	+	transcript5403.chr2.nnic@NA	transcript5403.chr2.nnic	NA	177263706	177265622	Gene ID= novel_gene_chr2_5404 TPM= 4.83 Transcript Type= NA
chr2	177392644	177543836	177392644	177543836	+	ENST00000264167.8@AGPS	ENST00000264167.8	protein_coding	177392644,177420269,177434327,177436764,177436980,177440965,177442407,177445546,177461893,177468416,177482059,177493148,177497689,177499618,177505506,177507970,177513819,177521269,177523748,177538074	177393049,177420358,177434417,177436884,177437054,177441036,177442486,177445626,177462018,177468524,177482186,177493199,177497765,177499730,177505575,177508031,177513908,177521368,177523805,177543836	Gene ID= ENSG00000018510.13 TPM= 2.9 Transcript Type= protein_coding
chr2	177614755	177618734	177614755	177618734	-	transcript5414.chr2.nnic@NA	transcript5414.chr2.nnic	NA	177614755	177618734	Gene ID= novel_gene_chr2_5415 TPM= 3.86 Transcript Type= NA
chr2	178112415	178129652	178112415	178129652	+	transcript5416.chr2.nnic@RBM45	transcript5416.chr2.nnic	protein_coding	178112415,178116262,178118055,178120287,178121180,178123522,178123828,178124127,178125984,178129359	178112846,178116384,178118181,178120409,178121359,178123651,178123912,178124290,178126184,178129652	Gene ID= ENSG00000155636.14 TPM= 1.93 Transcript Type= NA
chr2	178112455	178129653	178112455	178129653	+	ENST00000616198.4@RBM45	ENST00000616198.4	protein_coding	178112455,178116262,178118055,178120287,178121174,178123522,178123828,178124127,178125984,178129397	178112846,178116384,178118181,178120409,178121359,178123651,178123912,178124290,178126184,178129653	Gene ID= ENSG00000155636.14 TPM= 1.93 Transcript Type= protein_coding
chr2	178194513	178395785	178194513	178395785	+	transcript5423.chr2.nic@OSBPL6	transcript5423.chr2.nic	protein_coding	178194513,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178339672,178344286,178349224,178361682,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178194674,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178339764,178344360,178349389,178361815,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395785	Gene ID= ENSG00000079156.16 TPM= 3.86 Transcript Type= NA
chr2	178194516	178395785	178194516	178395785	+	transcript5424.chr2.nnic@OSBPL6	transcript5424.chr2.nnic	protein_coding	178194516,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178344286,178349224,178361682,178372126,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178194674,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178344360,178349389,178361815,178372233,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395785	Gene ID= ENSG00000079156.16 TPM= 1.93 Transcript Type= NA
chr2	178194439	178395785	178194439	178395785	+	transcript5429.chr2.nnic@OSBPL6	transcript5429.chr2.nnic	protein_coding	178194439,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178344286,178349224,178361682,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178194674,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178344360,178349389,178361815,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395785	Gene ID= ENSG00000079156.16 TPM= 17.38 Transcript Type= NA
chr2	178194461	178395785	178194461	178395785	+	transcript5433.chr2.nic@OSBPL6	transcript5433.chr2.nic	protein_coding	178194461,178230426,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178349224,178361682,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178194674,178230513,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178349389,178361815,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395785	Gene ID= ENSG00000079156.16 TPM= 5.79 Transcript Type= NA
chr2	178194451	178395785	178194451	178395785	+	transcript5438.chr2.nic@OSBPL6	transcript5438.chr2.nic	protein_coding	178194451,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178349224,178361682,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178194674,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178349389,178361815,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395785	Gene ID= ENSG00000079156.16 TPM= 15.76 Transcript Type= NA
chr2	178194513	178395785	178194513	178395785	+	transcript5441.chr2.nnic@OSBPL6	transcript5441.chr2.nnic	protein_coding	178194513,178284927,178306069,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178349224,178361682,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178194674,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178349389,178361815,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395785	Gene ID= ENSG00000079156.16 TPM= 2.9 Transcript Type= NA
chr2	178263385	178395785	178263385	178395785	+	transcript5443.chr2.nnic@OSBPL6	transcript5443.chr2.nnic	protein_coding	178263385,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178349224,178361682,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178263573,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178349389,178361815,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395785	Gene ID= ENSG00000079156.16 TPM= 1.93 Transcript Type= NA
chr2	178263576	178395785	178263576	178395785	+	transcript5445.chr2.nnic@OSBPL6	transcript5445.chr2.nnic	protein_coding	178263576,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178349224,178361682,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178263647,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178349389,178361815,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395785	Gene ID= ENSG00000079156.16 TPM= 1.93 Transcript Type= NA
chr2	178194523	178395772	178194523	178395772	+	ENST00000409045.7@OSBPL6	ENST00000409045.7	protein_coding	178194523,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178349224,178361682,178372126,178373890,178382420,178383024,178384039,178385458,178387061,178389009,178391073,178392412,178394313,178395451	178194674,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178349389,178361815,178372233,178374027,178382507,178383277,178384176,178385521,178387139,178389153,178391217,178392538,178394435,178395772	Gene ID= ENSG00000079156.16 TPM= 4.18 Transcript Type= protein_coding
chr2	178431414	178451231	178431414	178451231	-	ENST00000325748.8@PRKRA	ENST00000325748.8	protein_coding	178450966,178450242,178447505,178444422,178443267,178441610,178436145,178431414	178451231,178450411,178447586,178444500,178443384,178441704,178436319,178432254	Gene ID= ENSG00000180228.12 TPM= 148.98 Transcript Type= protein_coding
chr2	178463664	178478558	178463664	178478558	-	ENST00000424785.6@FKBP7	ENST00000424785.6	protein_coding	178478279,178477062,178469652,178463664	178478558,178477213,178469785,178465931	Gene ID= ENSG00000079150.17 TPM= 2.9 Transcript Type= protein_coding
chr2	178480480	178490813	178480480	178490813	+	transcript5477.chr2.nic@PLEKHA3	transcript5477.chr2.nic	protein_coding	178480480,178485641,178488968,178490659	178480909,178485757,178489014,178490813	Gene ID= ENSG00000116095.10 TPM= 1.93 Transcript Type= NA
chr2	178780081	178807470	178780081	178807470	-	transcript5487.chr2.nic@TTN	transcript5487.chr2.nic	protein_coding	178807212,178804552,178802138,178800395,178799825,178799487,178794922,178794399,178793404,178792072,178789978,178789360,178785848,178785620,178784070,178783720,178782806,178782539,178782212,178781121,178780081	178807470,178804655,178802341,178800682,178799910,178799731,178795252,178794551,178793541,178792197,178790115,178789497,178786141,178785742,178784351,178783785,178783064,178782602,178782427,178781263,178780205	Gene ID= ENSG00000155657.26 TPM= 155.2 Transcript Type= NA
chr2	178798495	178807408	178798495	178807408	-	ENST00000470257.1@TTN	ENST00000470257.1	protein_coding	178807212,178804552,178802138,178800395,178799825,178798495	178807408,178804655,178802341,178800682,178799910,178799731	Gene ID= ENSG00000155657.26 TPM= 11.19 Transcript Type= retained_intron
chr2	178531253	178534705	178531253	178534705	-	transcript5563.chr2.nnic@NA	transcript5563.chr2.nnic	NA	178531253	178534705	Gene ID= novel_gene_chr2_5564 TPM= 12.55 Transcript Type= NA
chr2	178533035	178534705	178533035	178534705	-	transcript5555.chr2.nnic@NA	transcript5555.chr2.nnic	NA	178533035	178534705	Gene ID= novel_gene_chr2_5556 TPM= 8.69 Transcript Type= NA
chr2	178559336	178568155	178559336	178568155	-	transcript5557.chr2.nnic@NA	transcript5557.chr2.nnic	NA	178559336	178568155	Gene ID= novel_gene_chr2_5558 TPM= 26.06 Transcript Type= NA
chr2	178561852	178565836	178561852	178565836	-	transcript5551.chr2.nnic@NA	transcript5551.chr2.nnic	NA	178561852	178565836	Gene ID= novel_gene_chr2_5552 TPM= 6.76 Transcript Type= NA
chr2	178564799	178568372	178564799	178568372	-	transcript5549.chr2.nnic@NA	transcript5549.chr2.nnic	NA	178564799	178568372	Gene ID= novel_gene_chr2_5550 TPM= 8.69 Transcript Type= NA
chr2	178568043	178575474	178568043	178575474	-	transcript5553.chr2.nnic@NA	transcript5553.chr2.nnic	NA	178568043	178575474	Gene ID= novel_gene_chr2_5554 TPM= 22.2 Transcript Type= NA
chr2	178664927	178668747	178664927	178668747	+	transcript5545.chr2.nnic@NA	transcript5545.chr2.nnic	NA	178664927	178668747	Gene ID= novel_gene_chr2_5546 TPM= 5.79 Transcript Type= NA
chr2	178745318	178749687	178745318	178749687	-	transcript5547.chr2.nnic@NA	transcript5547.chr2.nnic	NA	178745318	178749687	Gene ID= novel_gene_chr2_5548 TPM= 9.65 Transcript Type= NA
chr2	178835756	178874696	178835756	178874696	-	transcript5565.chr2.nnic@CCDC141	transcript5565.chr2.nnic	protein_coding	178874603,178872133,178871427,178869117,178868026,178865767,178856257,178855347,178853441,178850049,178845626,178835756	178874696,178872312,178871552,178869305,178868205,178865916,178856397,178855541,178853624,178850161,178845742,178837744	Gene ID= ENSG00000163492.14 TPM= 3.86 Transcript Type= NA
chr2	179109322	179264840	179109322	179264840	-	transcript5572.chr2.nnic@SESTD1	transcript5572.chr2.nnic	protein_coding	179264499,179191787,179183080,179176448,179172120,179151278,179149297,179146402,179143592,179140404,179132304,179124364,179121770,179117532,179116668,179115065,179112724,179109322	179264840,179191866,179183188,179176538,179172233,179151391,179149394,179146457,179143803,179140527,179132426,179124558,179121929,179117613,179116790,179115256,179112845,179110028	Gene ID= ENSG00000187231.13 TPM= 1.93 Transcript Type= NA
chr2	179441982	179861505	179441982	179861505	-	ENST00000410066.5@ZNF385B	ENST00000410066.5	protein_coding	179861101,179770521,179769503,179544827,179518528,179483272,179446525,179445550,179444876,179441982	179861505,179770672,179769802,179544969,179518638,179483434,179446770,179445728,179444977,179443468	Gene ID= ENSG00000144331.18 TPM= 3.86 Transcript Type= protein_coding
chr2	179944879	180007109	179944879	180007109	-	transcript5587.chr2.nnic@CWC22	transcript5587.chr2.nnic	protein_coding	180007070,179993315,179988577,179986695,179981752,179978190,179973634,179973193,179970941,179970650,179970501,179965878,179964547,179959022,179954957,179954205,179952471,179944879	180007109,179993454,179988644,179986805,179981997,179978318,179973802,179973246,179971076,179970856,179970563,179965982,179964628,179959082,179955034,179954357,179952598,179945715	Gene ID= ENSG00000163510.13 TPM= 2.9 Transcript Type= NA
chr2	179945621	180007113	179945621	180007113	-	ENST00000404136.2@CWC22	ENST00000404136.2	protein_coding	180007070,179993315,179988577,179986695,179981752,179978190,179973634,179973193,179970941,179970650,179970501,179965878,179964547,179959022,179954957,179954205,179952471,179950825,179950512,179945621	180007113,179993454,179988644,179986805,179981997,179978318,179973802,179973246,179971076,179970856,179970563,179965982,179964628,179959082,179955034,179954357,179952598,179950926,179950732,179945715	Gene ID= ENSG00000163510.13 TPM= 5.79 Transcript Type= protein_coding
chr2	180980341	181076586	180980341	181076586	+	transcript5592.chr2.nic@UBE2E3	transcript5592.chr2.nic	protein_coding	180980341,180982018,180984043,181057693,181060665,181062791,181075496,181076196	180980973,180982236,180984093,181057825,181060812,181063041,181075528,181076586	Gene ID= ENSG00000170035.15 TPM= 6.27 Transcript Type= NA
chr2	180980325	181063424	180980325	181063424	+	transcript5594.chr2.nic@UBE2E3	transcript5594.chr2.nic	protein_coding	180980325,180980942,180982018,180984043,181057693,181060665,181062791	180980546,180980973,180982236,180984093,181057825,181060812,181063424	Gene ID= ENSG00000170035.15 TPM= 9.41 Transcript Type= NA
chr2	180980606	181063441	180980606	181063441	+	ENST00000410062.8@UBE2E3	ENST00000410062.8	protein_coding	180980606,180982018,180984043,181057693,181060665,181062791	180980973,180982236,180984093,181057825,181060812,181063441	Gene ID= ENSG00000170035.15 TPM= 92.91 Transcript Type= protein_coding
chr2	180981124	181063441	180981124	181063441	+	ENST00000602710.5@UBE2E3	ENST00000602710.5	protein_coding	180981124,180982018,180984043,181057693,181060665,181062791	180981477,180982236,180984093,181057825,181060812,181063441	Gene ID= ENSG00000170035.15 TPM= 4.1 Transcript Type= protein_coding
chr2	181891713	181930738	181891713	181930738	+	transcript5609.chr2.nnic@SSFA2	transcript5609.chr2.nnic	protein_coding	181891713,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181916600,181918598,181918755,181919296,181920597,181921948,181928161,181929561	181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181917005,181918675,181918882,181919446,181920662,181922412,181928278,181930738	Gene ID= ENSG00000138434.16 TPM= 3.86 Transcript Type= NA
chr2	181891790	181930738	181891790	181930738	+	transcript5610.chr2.nnic@SSFA2	transcript5610.chr2.nnic	protein_coding	181891790,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181916838,181918598,181918755,181919296,181920597,181921948,181928161,181929561	181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181917005,181918675,181918882,181919446,181920662,181922412,181928278,181930738	Gene ID= ENSG00000138434.16 TPM= 5.79 Transcript Type= NA
chr2	181891833	181894695	181891833	181894695	+	ENST00000480753.1@SSFA2	ENST00000480753.1	protein_coding	181891833,181892615	181892277,181894695	Gene ID= ENSG00000138434.16 TPM= 5.79 Transcript Type= retained_intron
chr2	182833275	182867162	182833275	182867162	-	ENST00000295113.4@FRZB	ENST00000295113.4	protein_coding	182866075,182858786,182842478,182838409,182837948,182833275	182867162,182858833,182842543,182838613,182838011,182834965	Gene ID= ENSG00000162998.4 TPM= 3.86 Transcript Type= protein_coding
chr2	182924877	183038858	182924877	183038858	-	ENST00000360982.2@NCKAP1	ENST00000360982.2	protein_coding	183037992,183024978,183023806,183003233,183002974,183002127,183001953,182995701,182994839,182989030,182986171,182983286,182982821,182981244,182978834,182976893,182967216,182964676,182962159,182957457,182956462,182953113,182952793,182952405,182942070,182935293,182934752,182930695,182928783,182928117,182926816,182924877	183038858,183024995,183023916,183003325,183003030,183002269,183002043,182995838,182994887,182989186,182986227,182983382,182982927,182981376,182978915,182976951,182967361,182964808,182962278,182957596,182956593,182953331,182952923,182952502,182942163,182935375,182934832,182930788,182928899,182928226,182926905,182925818	Gene ID= ENSG00000061676.14 TPM= 159.28 Transcript Type= protein_coding
chr2	182909115	183038472	182909115	183038472	-	ENST00000361354.8@NCKAP1	ENST00000361354.8	protein_coding	183037992,183023806,183003233,183002974,183002127,183001953,182995701,182994839,182989030,182986171,182983286,182982821,182981244,182978834,182976893,182967216,182964676,182962159,182957457,182956462,182953113,182952793,182952405,182942070,182935293,182934752,182930695,182928783,182928117,182926816,182909115	183038472,183023916,183003325,183003030,183002269,183002043,182995838,182994887,182989186,182986227,182983382,182982927,182981376,182978915,182976951,182967361,182964808,182962278,182957596,182956593,182953331,182952923,182952502,182942163,182935375,182934832,182930788,182928899,182928226,182926905,182925818	Gene ID= ENSG00000061676.14 TPM= 16.41 Transcript Type= protein_coding
chr2	183078759	183100005	183078759	183100005	+	ENST00000354221.4@DUSP19	ENST00000354221.4	protein_coding	183078759,183083508,183087040,183095431	183079159,183083554,183087192,183100005	Gene ID= ENSG00000162999.12 TPM= 1.93 Transcript Type= protein_coding
chr2	183124355	183161680	183124355	183161680	+	ENST00000295119.8@NUP35	ENST00000295119.8	protein_coding	183124355,183128287,183130418,183133566,183151508,183157444,183158283,183159488,183161054	183124497,183128457,183130545,183133623,183151649,183157513,183158411,183159652,183161680	Gene ID= ENSG00000163002.12 TPM= 8.69 Transcript Type= protein_coding
chr2	186486156	186509363	186486156	186509363	+	ENST00000337859.10@ZC3H15	ENST00000337859.10	protein_coding	186486156,186495233,186500182,186501273,186502496,186504032,186505451,186505740,186506713,186508543	186486457,186495334,186500293,186501425,186502587,186504214,186505597,186505841,186506836,186509363	Gene ID= ENSG00000065548.17 TPM= 45.21 Transcript Type= protein_coding
chr2	186590293	186680896	186590293	186680896	+	transcript5672.chr2.nnic@ITGAV	transcript5672.chr2.nnic	protein_coding	186590293,186602021,186622339,186625473,186630797,186633329,186636082,186637065,186638277,186638409,186640915,186641386,186646686,186649840,186651982,186654650,186656247,186659038,186663768,186664494,186665126,186666704,186667150,186667671,186668762,186669701,186675604,186675820,186677197	186590523,186602151,186622430,186625587,186630858,186633374,186636207,186637109,186638320,186638465,186640967,186641588,186646877,186649885,186652089,186654708,186656401,186659175,186663835,186664641,186665218,186666783,186667230,186667776,186668920,186669814,186675717,186675927,186680896	Gene ID= ENSG00000138448.11 TPM= 2.9 Transcript Type= NA
chr2	186589954	186668020	186589954	186668020	+	transcript5674.chr2.nic@ITGAV	transcript5674.chr2.nic	protein_coding	186589954,186602021,186622339,186625473,186630797,186633329,186636082,186637065,186638277,186638409,186640915,186641386,186646686,186649840,186651982,186654650,186656247,186659038,186663768,186664494,186665126,186666704,186667150,186667671	186590523,186602151,186622430,186625587,186630858,186633374,186636207,186637109,186638320,186638465,186640967,186641588,186646877,186649885,186652089,186654708,186656401,186659175,186663835,186664641,186665218,186666783,186667230,186668020	Gene ID= ENSG00000138448.11 TPM= 1.93 Transcript Type= NA
chr2	186590030	186629584	186590030	186629584	+	transcript5676.chr2.nic@ITGAV	transcript5676.chr2.nic	protein_coding	186590030,186602021,186622339,186625473	186590523,186602151,186622430,186629584	Gene ID= ENSG00000138448.11 TPM= 1.93 Transcript Type= NA
chr2	186590065	186680901	186590065	186680901	+	ENST00000261023.7@ITGAV	ENST00000261023.7	protein_coding	186590065,186602021,186622339,186625473,186630797,186633329,186636082,186637065,186638277,186638409,186640915,186641386,186646686,186649840,186651982,186654650,186656247,186659038,186663768,186664494,186665126,186666704,186667150,186667671,186668762,186669701,186675604,186675820,186676813,186677197	186590523,186602151,186622430,186625587,186630858,186633374,186636207,186637109,186638320,186638465,186640967,186641588,186646877,186649885,186652089,186654708,186656401,186659175,186663835,186664641,186665218,186666783,186667230,186667776,186668920,186669814,186675717,186675927,186676935,186680901	Gene ID= ENSG00000138448.11 TPM= 23.17 Transcript Type= protein_coding
chr2	187464230	187522744	187464230	187522744	-	transcript5686.chr2.nnic@TFPI	transcript5686.chr2.nnic	protein_coding	187522624,187520542,187513616,187503648,187496881,187488337,187484811,187484124,187467753,187464230	187522744,187520618,187513646,187503770,187497078,187488375,187484987,187484216,187467932,187467042	Gene ID= ENSG00000003436.15 TPM= 3.62 Transcript Type= NA
chr2	187464230	187554435	187464230	187554435	-	transcript5690.chr2.nic@TFPI	transcript5690.chr2.nic	protein_coding	187554200,187513616,187503648,187496881,187488337,187484811,187484124,187467753,187464230	187554435,187513646,187503770,187497078,187488375,187484987,187484216,187467932,187467042	Gene ID= ENSG00000003436.15 TPM= 3.62 Transcript Type= NA
chr2	187464230	187554462	187464230	187554462	-	transcript5693.chr2.nic@TFPI	transcript5693.chr2.nic	protein_coding	187554200,187529364,187503648,187496881,187488337,187484811,187484124,187467753,187464230	187554462,187529485,187503770,187497078,187488375,187484987,187484216,187467932,187467042	Gene ID= ENSG00000003436.15 TPM= 3.62 Transcript Type= NA
chr2	187464261	187554492	187464261	187554492	-	ENST00000233156.8@TFPI	ENST00000233156.8	protein_coding	187554200,187503648,187496881,187488337,187484811,187484124,187467753,187464261	187554492,187503770,187497078,187488375,187484987,187484216,187467932,187467042	Gene ID= ENSG00000003436.15 TPM= 1.69 Transcript Type= protein_coding
chr2	188291872	188595059	188291872	188595059	+	transcript5705.chr2.nic@GULP1	transcript5705.chr2.nic	protein_coding	188291872,188383763,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188582341,188584265,188587855,188589740,188593940	188292166,188383889,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188582565,188584403,188587949,188589750,188595059	Gene ID= ENSG00000144366.15 TPM= 5.79 Transcript Type= NA
chr2	188974320	189012746	188974320	189012746	+	ENST00000304636.7@COL3A1	ENST00000304636.7	protein_coding	188974320,188984760,188985197,188985665,188987059,188988081,188988590,188989396,188990096,188990307,188991004,188991487,188991669,188992184,188992887,188993361,188994038,188994234,188994541,188994724,188995046,188995692,188996125,188996398,188997165,188997336,188997700,188998266,188998674,188999285,188999470,188999842,189001397,189001536,189002298,189002955,189003411,189003734,189003982,189004257,189005350,189006206,189006345,189006937,189007500,189007885,189008035,189008924,189010178,189010648,189011628	188974568,188984962,188985247,188985778,188987139,188988134,188988643,188989449,188990149,188990360,188991057,188991531,188991722,188992228,188992940,188993459,188994082,188994332,188994594,188994831,188995099,188995790,188996178,188996496,188997218,188997389,188997753,188998319,188998718,188999383,188999577,188999895,189001450,189001589,189002351,189003062,189003464,189003787,189004143,189004364,189005457,189006259,189006452,189006990,189007607,189007938,189008142,189009221,189010365,189010890,189012746	Gene ID= ENSG00000168542.14 TPM= 32.82 Transcript Type= protein_coding
chr2	189441473	189465071	189441473	189465071	+	transcript5729.chr2.nic@WDR75	transcript5729.chr2.nic	protein_coding	189441473,189448379,189450903,189451805,189455320,189457311,189458753,189459336,189462484,189463694	189441578,189448508,189450968,189451895,189455444,189457381,189458872,189459424,189462642,189465071	Gene ID= ENSG00000115368.9 TPM= 1.93 Transcript Type= NA
chr2	189441433	189475565	189441433	189475565	+	ENST00000314761.8@WDR75	ENST00000314761.8	protein_coding	189441433,189448379,189450903,189451805,189455320,189457311,189458753,189459336,189462484,189463694,189463846,189465079,189466425,189467468,189468475,189469344,189470076,189470819,189474186,189474717,189475213	189441578,189448508,189450968,189451895,189455444,189457381,189458872,189459424,189462642,189463753,189463961,189465254,189466582,189467648,189468569,189469439,189470245,189470878,189474332,189474808,189475565	Gene ID= ENSG00000115368.9 TPM= 20.27 Transcript Type= protein_coding
chr2	189560579	189580802	189560579	189580802	-	transcript5734.chr2.nnic@SLC40A1	transcript5734.chr2.nnic	protein_coding	189580418,189579813,189578219,189575161,189572846,189571715,189565354,189563584,189560579	189580802,189579880,189578472,189575320,189572961,189571841,189565599,189564225,189562191	Gene ID= ENSG00000138449.10 TPM= 9.65 Transcript Type= NA
chr2	189560579	189580887	189560579	189580887	-	ENST00000261024.6@SLC40A1	ENST00000261024.6	protein_coding	189580418,189579813,189575161,189572846,189571715,189565354,189563584,189560579	189580887,189579880,189575320,189572961,189571841,189565599,189564225,189562191	Gene ID= ENSG00000138449.10 TPM= 147.21 Transcript Type= protein_coding
chr2	189661374	189670831	189661374	189670831	+	transcript5744.chr2.nic@ASNSD1	transcript5744.chr2.nic	protein_coding	189661374,189663901,189665422,189666041,189667764,189670441	189661610,189663954,189665451,189667596,189667945,189670831	Gene ID= ENSG00000138381.9 TPM= 45.37 Transcript Type= NA
chr2	189661420	189670831	189661420	189670831	+	ENST00000260952.8@ASNSD1	ENST00000260952.8	protein_coding	189661420,189663901,189665376,189666041,189667764,189670441	189661610,189663954,189665451,189667596,189667945,189670831	Gene ID= ENSG00000138381.9 TPM= 74.33 Transcript Type= protein_coding
chr2	189746660	189762767	189746660	189762767	-	ENST00000264151.9@OSGEPL1	ENST00000264151.9	protein_coding	189762685,189761420,189755173,189754141,189753916,189752849,189752653,189750550,189746660	189762767,189761660,189755560,189754345,189754064,189752979,189752724,189750656,189747168	Gene ID= ENSG00000128694.11 TPM= 2.9 Transcript Type= protein_coding
chr2	189762704	189765556	189762704	189765556	+	ENST00000520651.1@OSGEPL1-AS1	ENST00000520651.1	antisense_RNA	189762704,189764855,189765459	189762992,189764975,189765556	Gene ID= ENSG00000253559.1 TPM= 1.93 Transcript Type= antisense_RNA
chr2	189771312	189784371	189771312	189784371	-	ENST00000392349.8@ORMDL1	ENST00000392349.8	protein_coding	189784269,189783014,189782422,189775565,189771312	189784371,189783123,189782602,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 2.9 Transcript Type= protein_coding
chr2	189771312	189784346	189771312	189784346	-	transcript5785.chr2.nnic@ORMDL1	transcript5785.chr2.nnic	protein_coding	189784269,189783014,189782422,189775565,189771312	189784346,189783402,189782602,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 1.93 Transcript Type= NA
chr2	189771312	189784347	189771312	189784347	-	transcript5792.chr2.nic@ORMDL1	transcript5792.chr2.nic	protein_coding	189784269,189782422,189775565,189771312	189784347,189783123,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 1.93 Transcript Type= NA
chr2	189770323	189784364	189770323	189784364	-	ENST00000392350.7@ORMDL1	ENST00000392350.7	protein_coding	189784269,189782422,189775565,189770323	189784364,189782602,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 2.9 Transcript Type= protein_coding
chr2	189784476	189877627	189784476	189877627	+	transcript5758.chr2.nnic@PMS1	transcript5758.chr2.nnic	protein_coding	189784476,189785346,189791790,189795769,189805652,189818017,189843964,189852655,189853939,189854239,189863743,189867799,189873496,189877272	189784593,189785471,189791941,189795951,189805754,189818180,189844080,189852777,189854082,189855128,189864228,189867929,189873656,189877627	Gene ID= ENSG00000064933.17 TPM= 5.79 Transcript Type= NA
chr2	189784381	189877629	189784381	189877629	+	ENST00000441310.6@PMS1	ENST00000441310.6	protein_coding	189784381,189791790,189795769,189805652,189818017,189843964,189852655,189853939,189854239,189863743,189867799,189873496,189877272	189784593,189791941,189795951,189805754,189818180,189844080,189852777,189854082,189855128,189864228,189867929,189873656,189877629	Gene ID= ENSG00000064933.17 TPM= 2.9 Transcript Type= protein_coding
chr2	190180863	190203484	190180863	190203484	+	ENST00000340623.4@C2orf88	ENST00000340623.4	protein_coding	190180863,190199697	190181109,190203484	Gene ID= ENSG00000187699.10 TPM= 6.76 Transcript Type= protein_coding
chr2	190180955	190200214	190180955	190200214	+	ENST00000443551.2@C2orf88	ENST00000443551.2	protein_coding	190180955,190199697	190181128,190200214	Gene ID= ENSG00000187699.10 TPM= 1.93 Transcript Type= protein_coding
chr2	190204635	190319860	190204635	190319860	-	transcript5807.chr2.nic@HIBCH	transcript5807.chr2.nic	protein_coding	190319716,190310754,190296813,190294546,190290405,190287586,190261156,190252162,190249640,190246154,190244887,190212956,190208880,190205100,190204635	190319860,190310796,190296953,190294630,190290485,190287638,190261234,190252307,190249726,190246212,190244968,190213075,190208913,190205232,190204802	Gene ID= ENSG00000198130.15 TPM= 4.83 Transcript Type= NA
chr2	190204634	190320045	190204634	190320045	-	ENST00000359678.9@HIBCH	ENST00000359678.9	protein_coding	190319716,190310754,190296813,190294546,190290405,190287586,190261156,190252162,190249640,190246154,190244887,190212956,190208880,190204634	190320045,190310796,190296953,190294630,190290485,190287638,190261234,190252307,190249726,190246212,190244968,190213075,190208913,190205232	Gene ID= ENSG00000198130.15 TPM= 22.2 Transcript Type= protein_coding
chr2	190343470	190371664	190343470	190371664	+	ENST00000392329.6@INPP1	ENST00000392329.6	protein_coding	190343470,190348888,190360039,190362627,190366695,190369103,190370844	190343961,190349031,190360306,190362687,190366895,190369277,190371664	Gene ID= ENSG00000151689.12 TPM= 11.1 Transcript Type= protein_coding
chr2	190343587	190371583	190343587	190371583	+	transcript5819.chr2.nnic@INPP1	transcript5819.chr2.nnic	protein_coding	190343587,190360039,190362627,190365113,190366695,190369103,190370844	190343961,190360306,190362687,190365202,190366895,190369277,190371583	Gene ID= ENSG00000151689.12 TPM= 1.93 Transcript Type= NA
chr2	190343570	190371665	190343570	190371665	+	ENST00000322522.8@INPP1	ENST00000322522.8	protein_coding	190343570,190360039,190362627,190366695,190369103,190370844	190343961,190360306,190362687,190366895,190369277,190371665	Gene ID= ENSG00000151689.12 TPM= 28.48 Transcript Type= protein_coding
chr2	190408242	190502078	190408242	190502078	+	transcript5829.chr2.nic@MFSD6	transcript5829.chr2.nic	protein_coding	190408242,190435977,190469758,190488657,190489768,190497439,190500015	190408503,190437561,190469855,190488818,190489866,190497719,190502078	Gene ID= ENSG00000151690.14 TPM= 4.83 Transcript Type= NA
chr2	190880834	190935289	190880834	190935289	+	ENST00000338435.8@GLS	ENST00000338435.8	protein_coding	190880834,190895152,190895604,190900564,190901947,190905004,190910263,190921024,190921145,190923917,190924543,190927306,190930437,190931545,190932716	190881470,190895248,190895725,190900693,190902026,190905167,190910321,190921056,190921203,190923983,190924593,190927482,190930568,190931637,190935289	Gene ID= ENSG00000115419.12 TPM= 24.13 Transcript Type= protein_coding
chr2	190880827	190965552	190880827	190965552	+	ENST00000320717.7@GLS	ENST00000320717.7	protein_coding	190880827,190895152,190895604,190900564,190901947,190905004,190910263,190921024,190921145,190923917,190924543,190927306,190930437,190931545,190953565,190954584,190954755,190962830	190881470,190895248,190895725,190900693,190902026,190905167,190910321,190921056,190921203,190923983,190924593,190927482,190930568,190931637,190953626,190954660,190954818,190965552	Gene ID= ENSG00000115419.12 TPM= 3.86 Transcript Type= protein_coding
chr2	190969149	191014200	190969149	191014200	-	transcript5842.chr2.nic@STAT1	transcript5842.chr2.nic	protein_coding	191014018,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975812,190974830,190969149	191014200,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887,190974932,190970717	Gene ID= ENSG00000115415.18 TPM= 6.76 Transcript Type= NA
chr2	190969266	191014158	190969266	191014158	-	transcript5844.chr2.nnic@STAT1	transcript5844.chr2.nnic	protein_coding	191014018,191013525,191009876,191008963,191007563,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975812,190974830,190969266	191014158,191013678,191010004,191009107,191007661,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887,190974932,190970717	Gene ID= ENSG00000115415.18 TPM= 1.93 Transcript Type= NA
chr2	190975537	191014168	190975537	191014168	-	ENST00000392322.7@STAT1	ENST00000392322.7	protein_coding	191014018,191013525,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975537	191014168,191013678,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887	Gene ID= ENSG00000115415.18 TPM= 5.79 Transcript Type= protein_coding
chr2	191245404	191425160	191245404	191425160	+	transcript5847.chr2.nic@MYO1B	transcript5847.chr2.nic	protein_coding	191245404,191276887,191296111,191329935,191341461,191346236,191350162,191360631,191362268,191363728,191364158,191369542,191370227,191381462,191383280,191385884,191387224,191390292,191392108,191393073,191396429,191400382,191402632,191408115,191409044,191411066,191414048,191414517,191416115,191423837	191245626,191277030,191296226,191330029,191341565,191346282,191350225,191360729,191362371,191363875,191364276,191369628,191370292,191381566,191383342,191386084,191387450,191390492,191392201,191393222,191396497,191400468,191402718,191408189,191409178,191411172,191414180,191414669,191416242,191425160	Gene ID= ENSG00000128641.18 TPM= 3.86 Transcript Type= NA
chr2	191678532	191686948	191678532	191686948	+	ENST00000425611.6@NABP1	ENST00000425611.6	protein_coding	191678532,191678990,191681946,191683729,191684230,191685599	191678705,191679128,191682017,191683804,191684296,191686948	Gene ID= ENSG00000173559.12 TPM= 1.93 Transcript Type= protein_coding
chr2	191834302	191847255	191834302	191847255	-	ENST00000304141.4@CAVIN2	ENST00000304141.4	protein_coding	191846443,191834302	191847255,191836717	Gene ID= ENSG00000168497.4 TPM= 82.05 Transcript Type= protein_coding
chr2	196133566	196171575	196133566	196171575	-	ENST00000263955.8@STK17B	ENST00000263955.8	protein_coding	196171333,196163262,196156439,196145911,196143560,196141249,196139620,196133566	196171575,196163427,196156651,196146055,196143686,196141297,196139799,196137729	Gene ID= ENSG00000081320.10 TPM= 4.83 Transcript Type= protein_coding
chr2	196763032	196799701	196763032	196799701	-	ENST00000263956.7@GTF3C3	ENST00000263956.7	protein_coding	196799510,196797797,196792956,196791337,196789879,196789204,196785441,196784857,196780559,196778896,196776427,196776010,196775116,196772916,196771748,196769915,196766565,196763032	196799701,196797908,196793152,196791460,196790070,196789369,196785588,196784929,196780662,196779067,196776629,196776111,196775251,196773153,196771938,196770039,196766717,196764685	Gene ID= ENSG00000119041.10 TPM= 5.79 Transcript Type= protein_coding
chr2	197389784	197435091	197389784	197435091	-	ENST00000335508.10@SF3B1	ENST00000335508.10	protein_coding	197434972,197423808,197421029,197420428,197418509,197416741,197409770,197408369,197407998,197405275,197405076,197403585,197402949,197402556,197401985,197401742,197401400,197400715,197400252,197400055,197398461,197397985,197396056,197392972,197389784	197435091,197423974,197421133,197420542,197418588,197416911,197410007,197408581,197408119,197405472,197405177,197403764,197403035,197402826,197402130,197401888,197401525,197400936,197400434,197400166,197398581,197398116,197396328,197393188,197392461	Gene ID= ENSG00000115524.15 TPM= 128.39 Transcript Type= protein_coding
chr2	197453423	197475308	197453423	197475308	+	ENST00000263960.6@COQ10B	ENST00000263960.6	protein_coding	197453423,197459932,197462539,197470070,197473757	197453664,197460081,197462731,197470171,197475308	Gene ID= ENSG00000115520.8 TPM= 50.2 Transcript Type= protein_coding
chr2	197486581	197500047	197486581	197500047	-	ENST00000388968.7@HSPD1	ENST00000388968.7	protein_coding	197499782,197498675,197497140,197495294,197494657,197494157,197493324,197490197,197489002,197488317,197487858,197486581	197500047,197498850,197497392,197495376,197494752,197494250,197493492,197490296,197489247,197488491,197488036,197487198	Gene ID= ENSG00000144381.16 TPM= 319.28 Transcript Type= protein_coding
chr2	197486586	197500274	197486586	197500274	-	ENST00000345042.6@HSPD1	ENST00000345042.6	protein_coding	197500160,197498675,197497140,197495294,197494657,197494157,197493324,197490197,197489002,197488317,197487858,197486586	197500274,197498850,197497392,197495376,197494752,197494250,197493492,197490296,197489247,197488491,197488036,197487198	Gene ID= ENSG00000144381.16 TPM= 13.27 Transcript Type= protein_coding
chr2	197499994	197503457	197499994	197503457	+	ENST00000233893.9@HSPE1	ENST00000233893.9	protein_coding	197499994,197501074,197503039,197503209	197500439,197501238,197503128,197503457	Gene ID= ENSG00000115541.10 TPM= 234.57 Transcript Type= protein_coding
chr2	197515832	197553699	197515832	197553699	+	ENST00000323303.8@MOB4	ENST00000323303.8	protein_coding	197515832,197523624,197535530,197540111,197540351,197548336,197550275,197550515	197516146,197523686,197535630,197540153,197540437,197548415,197550386,197553699	Gene ID= ENSG00000115540.14 TPM= 11.58 Transcript Type= protein_coding
chr2	197568224	197675995	197568224	197675995	-	ENST00000295049.8@RFTN2	ENST00000295049.8	protein_coding	197675320,197646483,197644158,197633718,197631011,197617800,197615876,197595991,197568224	197675995,197646666,197644272,197633997,197631220,197617921,197615979,197596069,197572280	Gene ID= ENSG00000162944.10 TPM= 1.93 Transcript Type= protein_coding
chr2	197705369	197708387	197705369	197708387	+	ENST00000282276.7@MARS2	ENST00000282276.7	protein_coding	197705369	197708387	Gene ID= ENSG00000247626.4 TPM= 19.31 Transcript Type= protein_coding
chr2	197726879	197786818	197726879	197786818	-	transcript5935.chr2.nnic@BOLL	transcript5935.chr2.nnic	protein_coding	197785983,197781722,197778975,197777059,197775665,197771855,197757353,197756428,197743061,197726879	197786818,197781865,197779066,197777113,197775740,197771982,197757400,197756556,197743159,197728578	Gene ID= ENSG00000152430.17 TPM= 3.86 Transcript Type= NA
chr2	199662782	199851205	199662782	199851205	-	transcript5955.chr2.nnic@FTCDNL1	transcript5955.chr2.nnic	protein_coding	199851072,199846075,199667338,199662782	199851205,199846170,199667469,199664037	Gene ID= ENSG00000226124.6 TPM= 1.93 Transcript Type= NA
chr2	199818360	199851178	199818360	199851178	-	transcript5958.chr2.nic@FTCDNL1	transcript5958.chr2.nic	protein_coding	199850759,199848848,199846075,199818360	199851178,199848969,199846170,199819757	Gene ID= ENSG00000226124.6 TPM= 3.38 Transcript Type= NA
chr2	199818360	199851192	199818360	199851192	-	transcript5959.chr2.nnic@FTCDNL1	transcript5959.chr2.nnic	protein_coding	199851072,199848848,199846075,199818360	199851192,199848969,199846170,199819757	Gene ID= ENSG00000226124.6 TPM= 3.38 Transcript Type= NA
chr2	199790983	199793469	199790983	199793469	-	transcript5966.chr2.nnic@NA	transcript5966.chr2.nnic	NA	199790983	199793469	Gene ID= novel_gene_chr2_5967 TPM= 1.93 Transcript Type= NA
chr2	199911293	199927328	199911293	199927328	+	transcript5968.chr2.nnic@C2orf69	transcript5968.chr2.nnic	protein_coding	199911293,199923831,199925062	199911771,199923933,199927328	Gene ID= ENSG00000178074.5 TPM= 2.9 Transcript Type= NA
chr2	199911301	199927328	199911301	199927328	+	transcript5969.chr2.nnic@C2orf69	transcript5969.chr2.nnic	protein_coding	199911301,199918383,199925062	199911771,199918504,199927328	Gene ID= ENSG00000178074.5 TPM= 2.9 Transcript Type= NA
chr2	199911256	199928273	199911256	199928273	+	ENST00000319974.5@C2orf69	ENST00000319974.5	protein_coding	199911256,199925062	199911771,199928273	Gene ID= ENSG00000178074.5 TPM= 101.36 Transcript Type= protein_coding
chr2	199955809	199964108	199955809	199964108	+	transcript5979.chr2.nnic@MAIP1	transcript5979.chr2.nnic	protein_coding	199955809,199959268,199959754,199961827,199963733	199956248,199959339,199959880,199961928,199964108	Gene ID= ENSG00000162972.10 TPM= 1.93 Transcript Type= NA
chr2	199955615	199964114	199955615	199964114	+	transcript5980.chr2.nic@MAIP1	transcript5980.chr2.nic	protein_coding	199955615,199959268,199959754,199963733	199956248,199959339,199959880,199964114	Gene ID= ENSG00000162972.10 TPM= 13.51 Transcript Type= NA
chr2	199955783	199961470	199955783	199961470	+	transcript5981.chr2.nic@MAIP1	transcript5981.chr2.nic	protein_coding	199955783,199959268,199959754	199956248,199959339,199961470	Gene ID= ENSG00000162972.10 TPM= 2.9 Transcript Type= NA
chr2	200306151	200478529	200306151	200478529	+	ENST00000409988.7@SPATS2L	ENST00000409988.7	protein_coding	200306151,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636	200306601,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200478529	Gene ID= ENSG00000196141.13 TPM= 5.63 Transcript Type= protein_coding
chr2	200306613	200478530	200306613	200478530	+	transcript5985.chr2.nic@SPATS2L	transcript5985.chr2.nic	protein_coding	200306613,200329431,200372109,200389223,200412311,200416379,200419250,200440649,200459769,200467290,200469914,200472832,200477636	200306922,200329480,200372251,200389283,200412419,200416428,200419496,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 5.82 Transcript Type= NA
chr2	200306524	200478530	200306524	200478530	+	ENST00000360760.9@SPATS2L	ENST00000360760.9	protein_coding	200306524,200329431,200389223,200412311,200416379,200419250,200440649,200459769,200467290,200469914,200472832,200477636	200306601,200329480,200389283,200412419,200416428,200419496,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 11.94 Transcript Type= protein_coding
chr2	200306666	200478530	200306666	200478530	+	transcript5990.chr2.nic@SPATS2L	transcript5990.chr2.nic	protein_coding	200306666,200329431,200389223,200412311,200416379,200419250,200440649,200459769,200467290,200469914,200472832,200477636	200306922,200329480,200389283,200412419,200416428,200419496,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 30.92 Transcript Type= NA
chr2	200305893	200478530	200305893	200478530	+	ENST00000409718.5@SPATS2L	ENST00000409718.5	protein_coding	200305893,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636	200306292,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 2.61 Transcript Type= protein_coding
chr2	200306708	200478530	200306708	200478530	+	ENST00000409140.7@SPATS2L	ENST00000409140.7	protein_coding	200306708,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636	200306922,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 6.47 Transcript Type= protein_coding
chr2	200488952	200510063	200488952	200510063	-	ENST00000359878.7@KCTD18	ENST00000359878.7	protein_coding	200509628,200506857,200504748,200498891,200497753,200493172,200488952	200510063,200507091,200504959,200499084,200497847,200493274,200490616	Gene ID= ENSG00000155729.12 TPM= 2.41 Transcript Type= protein_coding
chr2	200488958	200510068	200488958	200510068	-	ENST00000409157.5@KCTD18	ENST00000409157.5	protein_coding	200510011,200506857,200504748,200498891,200497753,200493172,200488958	200510068,200507091,200504959,200499084,200497847,200493274,200490616	Gene ID= ENSG00000155729.12 TPM= 5.31 Transcript Type= protein_coding
chr2	200585868	200671495	200585868	200671495	+	ENST00000374700.6@AOX1	ENST00000374700.6	protein_coding	200585868,200593146,200595272,200597397,200599620,200602284,200603267,200604017,200604696,200605536,200608984,200609321,200611384,200612609,200613804,200615971,200620650,200621120,200623861,200627353,200634791,200636911,200638215,200641098,200642610,200650974,200656842,200659165,200659995,200661579,200662855,200666687,200668615,200669575,200670629	200586153,200593203,200595368,200597505,200599746,200602345,200603356,200604097,200604840,200605628,200609135,200609414,200611493,200612793,200613966,200616063,200620819,200621246,200623983,200627449,200634915,200637044,200638302,200641184,200642801,200651201,200656937,200659293,200660069,200661631,200662969,200666752,200668803,200669742,200671495	Gene ID= ENSG00000138356.13 TPM= 7.72 Transcript Type= protein_coding
chr2	200595632	200598754	200595632	200598754	+	transcript6009.chr2.nnic@NA	transcript6009.chr2.nnic	NA	200595632	200598754	Gene ID= novel_gene_chr2_6010 TPM= 1.93 Transcript Type= NA
chr2	200811550	200823834	200811550	200823834	+	transcript6014.chr2.nic@BZW1	transcript6014.chr2.nic	protein_coding	200811550,200813208,200815341,200815667,200816325,200817106,200817974,200818223,200818755,200819982,200821183,200822147	200811727,200813281,200815517,200815761,200816390,200817241,200818083,200818393,200818901,200820120,200821305,200823834	Gene ID= ENSG00000082153.17 TPM= 7.08 Transcript Type= NA
chr2	200811546	200827338	200811546	200827338	+	ENST00000409600.5@BZW1	ENST00000409600.5	protein_coding	200811546,200813208,200815341,200815667,200816325,200817106,200817974,200818223,200818755,200819982,200821183,200822147	200811990,200813281,200815517,200815761,200816390,200817241,200818083,200818393,200818901,200820120,200821305,200827338	Gene ID= ENSG00000082153.17 TPM= 32.17 Transcript Type= protein_coding
chr2	200853081	200864656	200853081	200864656	-	ENST00000432425.5@CLK1	ENST00000432425.5	protein_coding	200864564,200861702,200861238,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853081	200864656,200861862,200861466,200859746,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449	Gene ID= ENSG00000013441.15 TPM= 9.65 Transcript Type= nonsense_mediated_decay
chr2	200853081	200864691	200853081	200864691	-	ENST00000473565.5@CLK1	ENST00000473565.5	protein_coding	200864564,200861702,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853081	200864691,200861862,200861466,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449	Gene ID= ENSG00000013441.15 TPM= 8.69 Transcript Type= retained_intron
chr2	200863538	200864655	200863538	200864655	+	transcript6041.chr2.nnic@NA	transcript6041.chr2.nnic	NA	200863538	200864655	Gene ID= novel_gene_chr2_6042 TPM= 1.93 Transcript Type= NA
chr2	200889357	200903925	200889357	200903925	+	transcript6044.chr2.nnic@NIF3L1	transcript6044.chr2.nnic	protein_coding	200889357,200891918,200893246,200895264,200897076,200899385,200903494	200889391,200892379,200893408,200895390,200897214,200899468,200903925	Gene ID= ENSG00000196290.14 TPM= 3.86 Transcript Type= NA
chr2	200889362	200903925	200889362	200903925	+	transcript6045.chr2.nic@NIF3L1	transcript6045.chr2.nic	protein_coding	200889362,200891969,200893246,200895264,200897076,200899385,200903494	200889391,200892379,200893408,200895390,200897214,200899468,200903925	Gene ID= ENSG00000196290.14 TPM= 2.41 Transcript Type= NA
chr2	200889388	200903930	200889388	200903930	+	ENST00000359683.8@NIF3L1	ENST00000359683.8	protein_coding	200889388,200891969,200893246,200895264,200897076,200899385,200903494	200889652,200892379,200893408,200895390,200897214,200899468,200903930	Gene ID= ENSG00000196290.14 TPM= 2.41 Transcript Type= protein_coding
chr2	200889385	200903930	200889385	200903930	+	ENST00000409020.5@NIF3L1	ENST00000409020.5	protein_coding	200889385,200891918,200893246,200895264,200897076,200899385,200903494	200889652,200892379,200893408,200895390,200897214,200899468,200903930	Gene ID= ENSG00000196290.14 TPM= 1.93 Transcript Type= protein_coding
chr2	200908973	200963680	200908973	200963680	-	ENST00000234296.6@ORC2	ENST00000234296.6	protein_coding	200963490,200959392,200958030,200957401,200949554,200942685,200941248,200937906,200935699,200933876,200931339,200926768,200925836,200920993,200920222,200913931,200913295,200908973	200963680,200959440,200958133,200957544,200949643,200942777,200941279,200937966,200935892,200933974,200931448,200926900,200925932,200921139,200920393,200913992,200913413,200911387	Gene ID= ENSG00000115942.8 TPM= 3.86 Transcript Type= protein_coding
chr2	200978493	201071665	200978493	201071665	-	ENST00000286181.7@FAM126B	ENST00000286181.7	protein_coding	201071610,201045496,201023959,201022831,201022059,201016991,201011392,201008973,200997445,200992887,200992281,200988262,200987365,200978493	201071665,201045593,201024039,201022932,201022114,201017170,201011472,201009088,200997540,200993003,200992368,200988421,200987532,200981871	Gene ID= ENSG00000155744.9 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr2	201071739	201085750	201071739	201085750	+	ENST00000237889.8@NDUFB3	ENST00000237889.8	protein_coding	201071739,201078881,201085459	201072059,201079022,201085750	Gene ID= ENSG00000119013.8 TPM= 128.39 Transcript Type= protein_coding
chr2	201072030	201085750	201072030	201085750	+	ENST00000454214.1@NDUFB3	ENST00000454214.1	protein_coding	201072030,201072279,201078881,201085459	201072059,201072361,201079022,201085750	Gene ID= ENSG00000119013.8 TPM= 4.83 Transcript Type= protein_coding
chr2	201122489	201167533	201122489	201167533	+	transcript6080.chr2.nic@CFLAR	transcript6080.chr2.nic	protein_coding	201122489,201129729,201133029,201135972,201140357,201145378,201149003,201149754,201160432,201163835	201122747,201130146,201133134,201136107,201140439,201145432,201149052,201149835,201160942,201167533	Gene ID= ENSG00000003402.19 TPM= 17.69 Transcript Type= NA
chr2	201116154	201164162	201116154	201164162	+	ENST00000443227.5@CFLAR	ENST00000443227.5	protein_coding	201116154,201133029,201135972,201140357,201145378,201149003,201149754,201160432,201163835	201116481,201133134,201136107,201140439,201145432,201149052,201149835,201160942,201164162	Gene ID= ENSG00000003402.19 TPM= 2.41 Transcript Type= protein_coding
chr2	201122589	201141598	201122589	201141598	+	transcript6096.chr2.nic@CFLAR	transcript6096.chr2.nic	protein_coding	201122589,201129729,201133029,201135972,201140357,201141374	201122747,201130146,201133134,201136107,201140439,201141598	Gene ID= ENSG00000003402.19 TPM= 6.44 Transcript Type= NA
chr2	201117751	201141598	201117751	201141598	+	transcript6098.chr2.nic@CFLAR	transcript6098.chr2.nic	protein_coding	201117751,201129729,201133029,201135972,201140357,201141374	201118901,201130146,201133134,201136107,201140439,201141598	Gene ID= ENSG00000003402.19 TPM= 17.54 Transcript Type= NA
chr2	201118523	201119177	201118523	201119177	+	ENST00000490965.1@CFLAR	ENST00000490965.1	protein_coding	201118523,201119028	201118901,201119177	Gene ID= ENSG00000003402.19 TPM= 2.9 Transcript Type= processed_transcript
chr2	201116167	201141598	201116167	201141598	+	ENST00000341222.10@CFLAR	ENST00000341222.10	protein_coding	201116167,201129729,201133029,201135972,201140357,201141374	201116481,201130146,201133134,201136107,201140439,201141598	Gene ID= ENSG00000003402.19 TPM= 30.57 Transcript Type= protein_coding
chr2	201116164	201119179	201116164	201119179	+	transcript6110.chr2.nnic@NA	transcript6110.chr2.nnic	NA	201116164	201119179	Gene ID= novel_gene_chr2_6111 TPM= 39.1 Transcript Type= NA
chr2	201120025	201122989	201120025	201122989	-	transcript6116.chr2.nnic@NA	transcript6116.chr2.nnic	NA	201120025	201122989	Gene ID= novel_gene_chr2_6117 TPM= 6.76 Transcript Type= NA
chr2	201120190	201126090	201120190	201126090	-	transcript6118.chr2.nnic@NA	transcript6118.chr2.nnic	NA	201120190	201126090	Gene ID= novel_gene_chr2_6119 TPM= 1.93 Transcript Type= NA
chr2	201137493	201140850	201137493	201140850	+	transcript6112.chr2.nnic@NA	transcript6112.chr2.nnic	NA	201137493	201140850	Gene ID= novel_gene_chr2_6113 TPM= 2.9 Transcript Type= NA
chr2	201379815	201451556	201379815	201451556	-	transcript6125.chr2.nnic@TRAK2	transcript6125.chr2.nnic	protein_coding	201451350,201420417,201407403,201401018,201399377,201398145,201397502,201395314,201394798,201392909,201389801,201389300,201387703,201386218,201384111,201381124,201379815	201451556,201420706,201407597,201401094,201399493,201398354,201397580,201395444,201394872,201393046,201389880,201389503,201388001,201386484,201384216,201381218,201380908	Gene ID= ENSG00000115993.12 TPM= 4.34 Transcript Type= NA
chr2	201377207	201451579	201377207	201451579	-	ENST00000332624.7@TRAK2	ENST00000332624.7	protein_coding	201451350,201420417,201407403,201401018,201399377,201398145,201397502,201395314,201394798,201392909,201389801,201389300,201387703,201386218,201384111,201377207	201451579,201420706,201407597,201401094,201399493,201398354,201397580,201395444,201394872,201393046,201389880,201389503,201388001,201386484,201384216,201381218	Gene ID= ENSG00000115993.12 TPM= 19.79 Transcript Type= protein_coding
chr2	201451669	201480846	201451669	201480846	+	ENST00000194530.7@STRADB	ENST00000194530.7	protein_coding	201451669,201454746,201458784,201469953,201472955,201474647,201475619,201477619,201478087,201478357,201479489,201480032	201451938,201454852,201458864,201470052,201473076,201474755,201475742,201477790,201478191,201478601,201479531,201480846	Gene ID= ENSG00000082146.12 TPM= 134.37 Transcript Type= protein_coding
chr2	201451684	201480846	201451684	201480846	+	transcript6144.chr2.nic@STRADB	transcript6144.chr2.nic	protein_coding	201451684,201454746,201458784,201472955,201474647,201475619,201477619,201478087,201478357,201479489,201480032	201451938,201454852,201458864,201473076,201474755,201475742,201477790,201478191,201478601,201479531,201480846	Gene ID= ENSG00000082146.12 TPM= 10.81 Transcript Type= NA
chr2	201451658	201452417	201451658	201452417	+	transcript6155.chr2.nnic@NA	transcript6155.chr2.nnic	NA	201451658	201452417	Gene ID= novel_gene_chr2_6156 TPM= 2.9 Transcript Type= NA
chr2	201620184	201642944	201620184	201642944	-	ENST00000409444.6@TMEM237	ENST00000409444.6	protein_coding	201642609,201640893,201640261,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201620184	201642944,201640924,201640265,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322	Gene ID= ENSG00000155755.18 TPM= 1.93 Transcript Type= protein_coding
chr2	201620184	201643517	201620184	201643517	-	ENST00000409883.6@TMEM237	ENST00000409883.6	protein_coding	201643359,201640893,201640261,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201620184	201643517,201640924,201640265,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322	Gene ID= ENSG00000155755.18 TPM= 3.86 Transcript Type= protein_coding
chr2	201623756	201643484	201623756	201643484	-	ENST00000286196.9@TMEM237	ENST00000286196.9	protein_coding	201643359,201640893,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201623756	201643484,201640924,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322	Gene ID= ENSG00000155755.18 TPM= 7.72 Transcript Type= nonsense_mediated_decay
chr2	201642727	201643776	201642727	201643776	+	transcript6172.chr2.nnic@NA	transcript6172.chr2.nnic	NA	201642727	201643776	Gene ID= novel_gene_chr2_6173 TPM= 1.93 Transcript Type= NA
chr2	201700554	201781189	201700554	201781189	-	ENST00000264276.10@ALS2	ENST00000264276.10	protein_coding	201780877,201768866,201767229,201760881,201757402,201754503,201753146,201749712,201746566,201744258,201741674,201738670,201733276,201729052,201728512,201727705,201727212,201726664,201726484,201725356,201724295,201723330,201723043,201718077,201715672,201710991,201709881,201707869,201706846,201705416,201705139,201704454,201704122,201700554	201781189,201768945,201767383,201761818,201757759,201754671,201753242,201749789,201746748,201744429,201741854,201738735,201733438,201729183,201728640,201727775,201727278,201726866,201726549,201725454,201724459,201723441,201723120,201718210,201715839,201711108,201710038,201707991,201707022,201705461,201705200,201704603,201704218,201701889	Gene ID= ENSG00000003393.14 TPM= 6.76 Transcript Type= protein_coding
chr2	201759457	201780956	201759457	201780956	-	ENST00000467448.5@ALS2	ENST00000467448.5	protein_coding	201780877,201768866,201767229,201759457	201780956,201768945,201767383,201761818	Gene ID= ENSG00000003393.14 TPM= 13.51 Transcript Type= protein_coding
chr2	202032770	202033537	202032770	202033537	-	ENST00000608741.1@AC069148.1	ENST00000608741.1	lincRNA	202032770	202033537	Gene ID= ENSG00000273209.1 TPM= 5.79 Transcript Type= lincRNA
chr2	202034587	202038445	202034587	202038445	+	ENST00000286201.2@FZD7	ENST00000286201.2	protein_coding	202034587	202038445	Gene ID= ENSG00000155760.2 TPM= 17.38 Transcript Type= protein_coding
chr2	202206180	202238608	202206180	202238608	-	ENST00000392246.6@SUMO1	ENST00000392246.6	protein_coding	202238440,202220032,202214357,202210735,202206180	202238608,202220106,202214434,202210806,202207321	Gene ID= ENSG00000116030.16 TPM= 18.34 Transcript Type= protein_coding
chr2	202265713	202303057	202265713	202303057	+	transcript6202.chr2.nnic@NOP58	transcript6202.chr2.nnic	protein_coding	202265713,202275113,202277950,202278212,202282351,202284345,202287660,202290323,202291125,202292777,202295674,202297379,202297845,202300086,202300234,202302921	202265986,202275189,202278002,202278329,202282472,202284481,202287724,202290457,202291270,202292903,202295837,202297513,202297906,202300137,202300367,202303057	Gene ID= ENSG00000055044.10 TPM= 1.93 Transcript Type= NA
chr2	202265716	202303666	202265716	202303666	+	ENST00000264279.9@NOP58	ENST00000264279.9	protein_coding	202265716,202275113,202277950,202282351,202284345,202287660,202290323,202291125,202292777,202295674,202297379,202297845,202300234,202302921,202303386	202265986,202275189,202278002,202282472,202284481,202287724,202290457,202291270,202292903,202295837,202297513,202297906,202300367,202303057,202303666	Gene ID= ENSG00000055044.10 TPM= 13.51 Transcript Type= protein_coding
chr2	202265713	202302934	202265713	202302934	+	transcript6206.chr2.nic@NOP58	transcript6206.chr2.nic	protein_coding	202265713,202275113,202277950,202282351,202284345,202287660,202290323,202291021,202292777,202295674,202297379,202297845,202300234,202302921	202265986,202275189,202278002,202282472,202284481,202287724,202290457,202291270,202292903,202295837,202297513,202297906,202300367,202302934	Gene ID= ENSG00000055044.10 TPM= 2.9 Transcript Type= NA
chr2	202374933	202376076	202374933	202376076	-	transcript6219.chr2.nnic@NA	transcript6219.chr2.nnic	NA	202374933	202376076	Gene ID= novel_gene_chr2_6220 TPM= 1.93 Transcript Type= NA
chr2	202777899	202871771	202777899	202871771	-	transcript6221.chr2.nic@ICA1L	transcript6221.chr2.nic	protein_coding	202871619,202870530,202869536,202828848,202825695,202821358,202819701,202817418,202815911,202814702,202811746,202796890,202788830,202785918,202777899	202871771,202870656,202869605,202829016,202825767,202821481,202819899,202817543,202816009,202814784,202811789,202796964,202789087,202786007,202779648	Gene ID= ENSG00000163596.16 TPM= 1.93 Transcript Type= NA
chr2	202895690	202912650	202895690	202912650	-	transcript6234.chr2.nic@WDR12	transcript6234.chr2.nic	protein_coding	202911436,202907865,202901025,202899531,202897300,202895690	202912650,202907959,202901119,202899637,202897415,202896219	Gene ID= ENSG00000138442.9 TPM= 1.93 Transcript Type= NA
chr2	203238215	203239286	203238215	203239286	-	transcript6258.chr2.nnic@NA	transcript6258.chr2.nnic	NA	203238215	203239286	Gene ID= novel_gene_chr2_6259 TPM= 3.86 Transcript Type= NA
chr2	203328281	203429770	203328281	203429770	+	transcript6268.chr2.nic@ABI2	transcript6268.chr2.nic	protein_coding	203328281,203366877,203380208,203391046,203395656,203402576,203411285,203416908,203427177	203328631,203367044,203380384,203391143,203395780,203402734,203411371,203417081,203429770	Gene ID= ENSG00000138443.15 TPM= 1.93 Transcript Type= NA
chr2	203433816	203440697	203433816	203440697	-	transcript6271.chr2.nnic@NA	transcript6271.chr2.nnic	NA	203433816	203440697	Gene ID= novel_gene_chr2_6272 TPM= 3.86 Transcript Type= NA
chr2	206019605	206086163	206019605	206086163	-	transcript6288.chr2.nic@INO80D	transcript6288.chr2.nic	protein_coding	206085901,206063151,206062799,206056198,206046504,206028111,206019605	206086163,206063244,206063045,206056943,206046612,206028335,206019845	Gene ID= ENSG00000114933.15 TPM= 1.93 Transcript Type= NA
chr2	205996304	205998470	205996304	205998470	+	transcript6295.chr2.nnic@NA	transcript6295.chr2.nnic	NA	205996304	205998470	Gene ID= novel_gene_chr2_6296 TPM= 10.62 Transcript Type= NA
chr2	206085205	206086851	206085205	206086851	+	transcript6293.chr2.nnic@NA	transcript6293.chr2.nnic	NA	206085205	206086851	Gene ID= novel_gene_chr2_6294 TPM= 11.58 Transcript Type= NA
chr2	206114817	206159603	206114817	206159603	-	ENST00000233190.10@NDUFS1	ENST00000233190.10	protein_coding	206159341,206153618,206152419,206149818,206149020,206147753,206147531,206146903,206144892,206144018,206142686,206141941,206138485,206132945,206130088,206127797,206126710,206126539,206114817	206159603,206153682,206152510,206149925,206149096,206147834,206147661,206147088,206145026,206144132,206142831,206142069,206138614,206133105,206130242,206127972,206126844,206126611,206124276	Gene ID= ENSG00000023228.13 TPM= 40.22 Transcript Type= protein_coding
chr2	206159585	206162928	206159585	206162928	+	ENST00000236957.9@EEF1B2	ENST00000236957.9	protein_coding	206159585,206159959,206160588,206161346,206162038,206162489,206162729	206159684,206160059,206160710,206161472,206162104,206162614,206162928	Gene ID= ENSG00000114942.13 TPM= 51.24 Transcript Type= protein_coding
chr2	206159594	206162927	206159594	206162927	+	ENST00000392221.5@EEF1B2	ENST00000392221.5	protein_coding	206159594,206159913,206160588,206161346,206162038,206162489,206162729	206159684,206160059,206160710,206161472,206162104,206162614,206162927	Gene ID= ENSG00000114942.13 TPM= 28.55 Transcript Type= protein_coding
chr2	206159605	206162928	206159605	206162928	+	ENST00000392222.6@EEF1B2	ENST00000392222.6	protein_coding	206159605,206160588,206161346,206162038,206162489,206162729	206160059,206160710,206161472,206162104,206162614,206162928	Gene ID= ENSG00000114942.13 TPM= 485.63 Transcript Type= protein_coding
chr2	206443539	206621130	206443539	206621130	+	ENST00000264377.7@ADAM23	ENST00000264377.7	protein_coding	206443539,206445307,206481232,206530885,206542052,206543253,206547429,206548281,206550095,206557427,206559955,206561128,206562203,206565020,206567223,206570740,206571727,206573115,206587325,206588091,206589409,206592617,206594737,206596051,206609910,206617579	206444080,206445524,206481308,206530948,206542134,206543316,206547501,206548354,206550160,206557498,206560118,206561212,206562293,206565068,206567322,206570811,206571816,206573195,206587375,206588154,206589514,206592736,206594905,206596162,206610000,206621130	Gene ID= ENSG00000114948.12 TPM= 2.9 Transcript Type= protein_coding
chr2	206765357	206792509	206765357	206792509	+	ENST00000236980.10@FASTKD2	ENST00000236980.10	protein_coding	206765357,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206791683	206765654,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206792509	Gene ID= ENSG00000118246.13 TPM= 42.47 Transcript Type= protein_coding
chr2	206765432	206791889	206765432	206791889	+	ENST00000402774.7@FASTKD2	ENST00000402774.7	protein_coding	206765432,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206791683	206765747,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206791889	Gene ID= ENSG00000118246.13 TPM= 41.51 Transcript Type= protein_coding
chr2	206765606	206791806	206765606	206791806	+	ENST00000403094.3@FASTKD2	ENST00000403094.3	protein_coding	206765606,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206791683	206765762,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206791806	Gene ID= ENSG00000118246.13 TPM= 27.99 Transcript Type= protein_coding
chr2	206794530	206796187	206794530	206796187	+	transcript6371.chr2.nnic@NA	transcript6371.chr2.nnic	NA	206794530	206796187	Gene ID= novel_gene_chr2_6372 TPM= 4.83 Transcript Type= NA
chr2	207172195	207174396	207172195	207174396	+	transcript6374.chr2.nnic@NA	transcript6374.chr2.nnic	NA	207172195	207174396	Gene ID= novel_gene_chr2_6375 TPM= 1.93 Transcript Type= NA
chr2	207529912	207603431	207529912	207603431	+	ENST00000353267.7@CREB1	ENST00000353267.7	protein_coding	207529912,207555628,207560226,207567463,207570179,207575272,207577505,207596914	207530134,207555749,207560372,207567563,207570321,207575454,207577655,207603431	Gene ID= ENSG00000118260.14 TPM= 2.9 Transcript Type= protein_coding
chr2	207530122	207530820	207530122	207530820	+	transcript6407.chr2.nnic@NA	transcript6407.chr2.nnic	NA	207530122	207530820	Gene ID= novel_gene_chr2_6408 TPM= 1.93 Transcript Type= NA
chr2	207581353	207625331	207581353	207625331	-	transcript6392.chr2.nic@METTL21A	transcript6392.chr2.nic	protein_coding	207625062,207624229,207621806,207581353	207625331,207624404,207621917,207581946	Gene ID= ENSG00000144401.14 TPM= 3.86 Transcript Type= NA
chr2	207581427	207625415	207581427	207625415	-	transcript6396.chr2.nic@METTL21A	transcript6396.chr2.nic	protein_coding	207625265,207624229,207621806,207581427	207625415,207624404,207621917,207581946	Gene ID= ENSG00000144401.14 TPM= 2.9 Transcript Type= NA
chr2	208236227	208255133	208236227	208255133	-	ENST00000345146.6@IDH1	ENST00000345146.6	protein_coding	208254939,208253886,208251430,208248369,208245319,208243427,208241994,208239863,208239071,208236227	208255133,208253959,208251567,208248660,208245424,208243604,208242145,208240003,208239233,208237169	Gene ID= ENSG00000138413.13 TPM= 9.17 Transcript Type= protein_coding
chr2	208236232	208254458	208236232	208254458	-	ENST00000446179.5@IDH1	ENST00000446179.5	protein_coding	208254343,208253886,208251430,208248369,208245319,208243427,208241994,208239863,208239071,208236232	208254458,208253959,208251567,208248660,208245424,208243604,208242145,208240003,208239233,208237169	Gene ID= ENSG00000138413.13 TPM= 6.27 Transcript Type= protein_coding
chr2	210002565	210021576	210002565	210021576	+	ENST00000359429.10@RPE	ENST00000359429.10	protein_coding	210002565,210009657,210015973,210016507,210017473,210019669	210002783,210009736,210016112,210016641,210017559,210021576	Gene ID= ENSG00000197713.14 TPM= 13.51 Transcript Type= protein_coding
chr2	210021423	210171383	210021423	210171383	-	ENST00000281772.13@KANSL1L	ENST00000281772.13	protein_coding	210171149,210153495,210129031,210104104,210098086,210075552,210043939,210040420,210031421,210029803,210028845,210027296,210025104,210024033,210021423	210171383,210154611,210129172,210104301,210098207,210075756,210044104,210040527,210031546,210029918,210028969,210027350,210025216,210024201,210023179	Gene ID= ENSG00000144445.16 TPM= 2.9 Transcript Type= protein_coding
chr2	210187939	210225491	210187939	210225491	-	ENST00000233710.3@ACADL	ENST00000233710.3	protein_coding	210225187,210220647,210217965,210216347,210210196,210205632,210204581,210203331,210195211,210192804,210187939	210225491,210220802,210218102,210216511,210210262,210205796,210204682,210203444,210195338,210192890,210189054	Gene ID= ENSG00000115361.7 TPM= 3.86 Transcript Type= protein_coding
chr2	210290150	210303629	210290150	210303629	-	ENST00000341685.8@MYL1	ENST00000341685.8	protein_coding	210303542,210302768,210298420,210294245,210293723,210291032,210290150	210303629,210302792,210298563,210294418,210293800,210291074,210290467	Gene ID= ENSG00000168530.15 TPM= 1683.24 Transcript Type= protein_coding
chr2	210290150	210315190	210290150	210315190	-	ENST00000352451.3@MYL1	ENST00000352451.3	protein_coding	210314911,210302488,210298420,210294245,210293723,210291032,210290150	210315190,210302515,210298563,210294418,210293800,210291074,210290467	Gene ID= ENSG00000168530.15 TPM= 465.97 Transcript Type= protein_coding
chr2	210431249	210476733	210431249	210476733	-	transcript6494.chr2.nnic@LANCL1	transcript6494.chr2.nnic	protein_coding	210476620,210476316,210471959,210468148,210455107,210441308,210440598,210437690,210436216,210435387,210431249	210476733,210476412,210472076,210468241,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 4.59 Transcript Type= NA
chr2	210431249	210476767	210431249	210476767	-	ENST00000450366.6@LANCL1	ENST00000450366.6	protein_coding	210476620,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249	210476767,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 14.24 Transcript Type= protein_coding
chr2	210431249	210476739	210431249	210476739	-	ENST00000443314.5@LANCL1	ENST00000443314.5	protein_coding	210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249	210476739,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 8.45 Transcript Type= protein_coding
chr2	210431249	210476757	210431249	210476757	-	ENST00000441020.7@LANCL1	ENST00000441020.7	protein_coding	210476709,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249	210476757,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 7.48 Transcript Type= protein_coding
chr2	210434115	210476705	210434115	210476705	-	ENST00000233714.8@LANCL1	ENST00000233714.8	protein_coding	210476647,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210434115	210476705,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 1.93 Transcript Type= protein_coding
chr2	211619253	212538529	211619253	212538529	-	ENST00000260943.10@ERBB4	ENST00000260943.10	protein_coding	212538449,212124752,211947430,211788025,211750639,211725076,211722393,211713535,211712050,211705318,211704104,211701967,211679052,211673164,211665323,211657950,211630462,211623922,211619253	212538529,212124903,211947616,211788159,211750704,211725194,211722534,211713648,211712176,211705391,211704194,211702166,211679184,211673257,211665477,211657994,211630594,211624044,211619275	Gene ID= ENSG00000178568.14 TPM= 2.9 Transcript Type= protein_coding
chr2	212538285	212539198	212538285	212539198	+	transcript6508.chr2.nnic@NA	transcript6508.chr2.nnic	NA	212538285	212539198	Gene ID= novel_gene_chr2_6509 TPM= 5.79 Transcript Type= NA
chr2	213151914	213153657	213151914	213153657	+	transcript6512.chr2.nnic@NA	transcript6512.chr2.nnic	NA	213151914	213153657	Gene ID= novel_gene_chr2_6513 TPM= 5.79 Transcript Type= NA
chr2	213284392	213317978	213284392	213317978	+	ENST00000432529.6@SPAG16	ENST00000432529.6	protein_coding	213284392,213296064,213297262,213310059,213317219	213284619,213296110,213297357,213310177,213317978	Gene ID= ENSG00000144451.18 TPM= 10.62 Transcript Type= protein_coding
chr2	214725646	214809704	214725646	214809704	-	ENST00000260947.8@BARD1	ENST00000260947.8	protein_coding	214809412,214797061,214792297,214780560,214769232,214767482,214752447,214745722,214745067,214730411,214725646	214809704,214797117,214792445,214781509,214769312,214767654,214752555,214745854,214745159,214730508,214729008	Gene ID= ENSG00000138376.10 TPM= 1.93 Transcript Type= protein_coding
chr2	215311817	215349763	215311817	215349763	+	ENST00000236959.13@ATIC	ENST00000236959.13	protein_coding	215311817,215312498,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759,215349094,215349536	215312161,215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215346941,215349249,215349763	Gene ID= ENSG00000138363.14 TPM= 74.57 Transcript Type= protein_coding
chr2	215312072	215349763	215312072	215349763	+	ENST00000443953.5@ATIC	ENST00000443953.5	protein_coding	215312072,215312498,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759,215349094,215349536	215312390,215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215346941,215349249,215349763	Gene ID= ENSG00000138363.14 TPM= 18.58 Transcript Type= nonsense_mediated_decay
chr2	215312091	215349763	215312091	215349763	+	ENST00000435675.5@ATIC	ENST00000435675.5	protein_coding	215312091,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759,215349094,215349536	215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215346941,215349249,215349763	Gene ID= ENSG00000138363.14 TPM= 27.27 Transcript Type= protein_coding
chr2	215360862	215436073	215360862	215436073	-	ENST00000443816.5@FN1	ENST00000443816.5	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215372109,215371909,215370294,215367863,215365505,215364879,215361969,215360862	215436073,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215372015,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 2.9 Transcript Type= protein_coding
chr2	215360454	215436068	215360454	215436068	-	ENST00000357867.8@FN1	ENST00000357867.8	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360454	215436068,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372015,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 2.9 Transcript Type= protein_coding
chr2	215360866	215436068	215360866	215436068	-	ENST00000356005.8@FN1	ENST00000356005.8	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360866	215436068,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 2.9 Transcript Type= protein_coding
chr2	216107464	216206303	216107464	216206303	+	ENST00000392133.7@XRCC5	ENST00000392133.7	protein_coding	216107464,216107653,216109091,216113016,216116659,216117746,216119043,216122062,216125917,216127536,216130875,216132325,216137088,216138089,216141186,216148083,216160068,216161979,216190225,216192639,216194919,216204322,216205188	216107532,216107698,216109457,216113129,216116842,216117794,216119165,216122253,216126031,216127674,216130987,216132387,216137225,216138179,216141319,216148276,216160161,216162048,216190334,216192735,216194986,216204396,216206303	Gene ID= ENSG00000079246.15 TPM= 95.57 Transcript Type= protein_coding
chr2	216109297	216206291	216109297	216206291	+	ENST00000392132.6@XRCC5	ENST00000392132.6	protein_coding	216109297,216113016,216116659,216117746,216119043,216122062,216125917,216127536,216130875,216132325,216137088,216138089,216141186,216148083,216160068,216161979,216190225,216192639,216194919,216204322,216205188	216109457,216113129,216116842,216117794,216119165,216122253,216126031,216127674,216130987,216132387,216137225,216138179,216141319,216148276,216160161,216162048,216190334,216192735,216194986,216204396,216206291	Gene ID= ENSG00000079246.15 TPM= 73.36 Transcript Type= protein_coding
chr2	216412453	216483053	216412453	216483053	+	transcript6548.chr2.nic@SMARCAL1	transcript6548.chr2.nic	protein_coding	216412453,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738	216412603,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483053	Gene ID= ENSG00000138375.12 TPM= 5.15 Transcript Type= NA
chr2	216412414	216483053	216412414	216483053	+	ENST00000357276.8@SMARCAL1	ENST00000357276.8	protein_coding	216412414,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738	216412648,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483053	Gene ID= ENSG00000138375.12 TPM= 8.04 Transcript Type= protein_coding
chr2	216412556	216483053	216412556	216483053	+	transcript6550.chr2.nic@SMARCAL1	transcript6550.chr2.nic	protein_coding	216412556,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738	216412734,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483053	Gene ID= ENSG00000138375.12 TPM= 2.25 Transcript Type= NA
chr2	216412743	216483017	216412743	216483017	+	ENST00000358207.9@SMARCAL1	ENST00000358207.9	protein_coding	216412743,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738	216412798,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483017	Gene ID= ENSG00000138375.12 TPM= 3.86 Transcript Type= protein_coding
chr2	216498189	216504086	216498189	216504086	+	ENST00000491306.5@RPL37A	ENST00000491306.5	protein_coding	216498189,216499270,216499949,216501341	216498877,216499398,216500031,216504086	Gene ID= ENSG00000197756.9 TPM= 473.97 Transcript Type= protein_coding
chr2	216498825	216501467	216498825	216501467	+	ENST00000490649.1@RPL37A	ENST00000490649.1	protein_coding	216498825,216499270,216499949	216498877,216499398,216501467	Gene ID= ENSG00000197756.9 TPM= 12.55 Transcript Type= retained_intron
chr2	216633395	216664436	216633395	216664436	+	ENST00000233809.8@IGFBP2	ENST00000233809.8	protein_coding	216633395,216660557,216661858,216663940	216633965,216660786,216661998,216664436	Gene ID= ENSG00000115457.9 TPM= 67.57 Transcript Type= protein_coding
chr2	216672105	216695525	216672105	216695525	-	ENST00000233813.4@IGFBP5	ENST00000233813.4	protein_coding	216694439,216678850,216678112,216672105	216695525,216679079,216678231,216676882	Gene ID= ENSG00000115461.4 TPM= 332.07 Transcript Type= protein_coding
chr2	217802789	217837151	217802789	217837151	-	transcript6567.chr2.nnic@TNS1	transcript6567.chr2.nnic	protein_coding	217837074,217836015,217835091,217831455,217829844,217821740,217817690,217814912,217813685,217813215,217812368,217810248,217809823,217808603,217808075,217802789	217837151,217836211,217835166,217831547,217829882,217821938,217818759,217814998,217813816,217813307,217812445,217810319,217809991,217808671,217808107,217804603	Gene ID= ENSG00000079308.16 TPM= 557.01 Transcript Type= NA
chr2	217799789	217818028	217799789	217818028	-	transcript6577.chr2.nnic@TNS1	transcript6577.chr2.nnic	protein_coding	217817690,217814912,217813685,217813215,217812368,217810248,217809823,217808603,217808075,217799789	217818028,217814987,217813816,217813307,217812445,217810319,217809991,217808671,217808107,217804603	Gene ID= ENSG00000079308.16 TPM= 495.88 Transcript Type= NA
chr2	217839338	217843144	217839338	217843144	+	transcript6586.chr2.nnic@NA	transcript6586.chr2.nnic	NA	217839338	217843144	Gene ID= novel_gene_chr2_6587 TPM= 7.72 Transcript Type= NA
chr2	217843341	217848263	217843341	217848263	-	transcript6588.chr2.nnic@NA	transcript6588.chr2.nnic	NA	217843341	217848263	Gene ID= novel_gene_chr2_6589 TPM= 11.58 Transcript Type= NA
chr2	218216102	218217059	218216102	218217059	-	transcript6619.chr2.nnic@NA	transcript6619.chr2.nnic	NA	218216102	218217059	Gene ID= novel_gene_chr2_6620 TPM= 4.83 Transcript Type= NA
chr2	218217051	218249904	218217051	218249904	+	transcript6603.chr2.nic@ARPC2	transcript6603.chr2.nic	protein_coding	218217051,218217463,218225920,218228738,218234352,218238664,218239391,218245420,218249364,218249821	218217254,218217544,218225954,218228850,218234397,218238850,218239484,218245546,218249464,218249904	Gene ID= ENSG00000163466.15 TPM= 18.34 Transcript Type= NA
chr2	218217094	218254348	218217094	218254348	+	ENST00000315717.9@ARPC2	ENST00000315717.9	protein_coding	218217094,218217463,218225920,218228738,218234352,218238664,218239391,218245420,218249364,218249821,218253891	218217254,218217544,218225954,218228850,218234397,218238850,218239484,218245546,218249464,218249921,218254348	Gene ID= ENSG00000163466.15 TPM= 151.55 Transcript Type= protein_coding
chr2	218264123	218270257	218264123	218270257	-	ENST00000248450.8@AAMP	ENST00000248450.8	protein_coding	218269966,218269382,218267494,218266847,218266443,218266064,218265831,218265579,218265371,218265020,218264123	218270257,218269534,218267613,218266986,218266587,218266147,218265946,218265682,218265461,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 192.43 Transcript Type= protein_coding
chr2	218264129	218270178	218264129	218270178	-	ENST00000444053.5@AAMP	ENST00000444053.5	protein_coding	218269966,218269382,218267494,218266847,218266443,218266064,218265831,218265579,218265371,218265020,218264129	218270178,218269537,218267613,218266986,218266587,218266147,218265946,218265682,218265461,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 28.81 Transcript Type= protein_coding
chr2	218264130	218270088	218264130	218270088	-	ENST00000475678.5@AAMP	ENST00000475678.5	protein_coding	218269966,218269382,218267494,218266847,218265579,218265371,218265020,218264130	218270088,218269534,218267613,218266986,218266587,218265461,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 1.79 Transcript Type= retained_intron
chr2	218270392	218272947	218270392	218272947	+	ENST00000248451.7@PNKD	ENST00000248451.7	protein_coding	218270392,218271381,218272570	218270602,218271549,218272947	Gene ID= ENSG00000127838.13 TPM= 73.85 Transcript Type= protein_coding
chr2	218270518	218272947	218270518	218272947	+	transcript6636.chr2.nnic@PNKD	transcript6636.chr2.nnic	protein_coding	218270518,218271424,218272570	218270602,218271549,218272947	Gene ID= ENSG00000127838.13 TPM= 6.27 Transcript Type= NA
chr2	218274201	218292560	218274201	218292560	-	transcript6643.chr2.nic@TMBIM1	transcript6643.chr2.nic	protein_coding	218292466,218285763,218281940,218280026,218279289,218279038,218278515,218277935,218277633,218277366,218277004,218276026,218274201	218292560,218285938,218282181,218280126,218279353,218279091,218278565,218277974,218277670,218277453,218277099,218276079,218275621	Gene ID= ENSG00000135926.14 TPM= 27.4 Transcript Type= NA
chr2	218274201	218287302	218274201	218287302	-	transcript6648.chr2.nic@TMBIM1	transcript6648.chr2.nic	protein_coding	218287207,218281940,218280026,218279289,218279038,218278515,218277935,218277633,218277366,218277004,218276026,218274201	218287302,218282181,218280126,218279353,218279091,218278565,218277974,218277670,218277453,218277099,218276079,218275621	Gene ID= ENSG00000135926.14 TPM= 37.53 Transcript Type= NA
chr2	218274192	218292577	218274192	218292577	-	ENST00000258412.7@TMBIM1	ENST00000258412.7	protein_coding	218292466,218281940,218280026,218279289,218279038,218278515,218277935,218277633,218277366,218277004,218276026,218274192	218292577,218282181,218280126,218279353,218279091,218278565,218277974,218277670,218277453,218277099,218276079,218275621	Gene ID= ENSG00000135926.14 TPM= 263.99 Transcript Type= protein_coding
chr2	218399755	218405941	218399755	218405941	+	ENST00000273062.6@CTDSP1	ENST00000273062.6	protein_coding	218399755,218401564,218402111,218402349,218403035,218403232,218404297	218400157,218401712,218402215,218402405,218403127,218403417,218405941	Gene ID= ENSG00000144579.7 TPM= 49.23 Transcript Type= protein_coding
chr2	218450251	218568361	218450251	218568361	-	ENST00000258399.7@USP37	ENST00000258399.7	protein_coding	218568178,218562673,218560820,218558498,218553553,218549809,218546919,218546221,218534609,218529956,218509979,218498026,218497734,218495760,218488304,218485664,218482070,218479650,218476840,218474630,218466010,218463306,218459790,218457092,218455580,218450251	218568361,218562813,218560883,218558677,218553724,218549909,218547091,218546298,218534706,218530040,218510140,218498157,218497857,218495950,218488421,218485743,218482234,218479715,218476981,218474885,218466176,218463366,218459905,218457161,218455718,218455017	Gene ID= ENSG00000135913.10 TPM= 4.83 Transcript Type= protein_coding
chr2	218568875	218593842	218568875	218593842	+	ENST00000295701.9@CNOT9	ENST00000295701.9	protein_coding	218568875,218580561,218582971,218584612,218587586,218592304,218592616,218593528	218568978,218580740,218583086,218584721,218587695,218592402,218592707,218593842	Gene ID= ENSG00000144580.13 TPM= 9.65 Transcript Type= protein_coding
chr2	218607899	218637175	218607899	218637175	+	transcript6678.chr2.nic@PLCD4	transcript6678.chr2.nic	protein_coding	218607899,218615707,218615904,218618579,218621470,218622647,218628029,218629519,218630650,218632136,218633386,218633605,218634105,218634458,218635796,218636243,218636471	218608070,218615761,218616062,218618807,218621599,218622878,218628230,218629663,218630802,218632312,218633481,218633761,218634221,218634630,218635931,218636392,218637175	Gene ID= ENSG00000115556.13 TPM= 2.65 Transcript Type= NA
chr2	218607919	218637173	218607919	218637173	+	transcript6679.chr2.nic@PLCD4	transcript6679.chr2.nic	protein_coding	218607919,218615707,218615904,218618579,218621470,218622647,218628029,218629519,218630650,218632136,218633605,218634105,218634458,218635796,218636243,218636471,218636860	218608070,218615761,218616062,218618807,218621599,218622878,218628230,218629663,218630802,218632312,218633761,218634221,218634630,218635931,218636392,218636578,218637173	Gene ID= ENSG00000115556.13 TPM= 3.62 Transcript Type= NA
chr2	218607765	218637181	218607765	218637181	+	ENST00000450993.6@PLCD4	ENST00000450993.6	protein_coding	218607765,218615707,218615904,218618579,218621470,218622647,218628029,218629519,218630650,218632136,218633605,218634105,218634458,218635796,218636243,218636471	218608070,218615761,218616062,218618807,218621599,218622878,218628230,218629663,218630802,218632312,218633761,218634221,218634630,218635931,218636392,218637181	Gene ID= ENSG00000115556.13 TPM= 33.54 Transcript Type= protein_coding
chr2	218607901	218637175	218607901	218637175	+	transcript6685.chr2.nic@PLCD4	transcript6685.chr2.nic	protein_coding	218607901,218615707,218615904,218618579,218621470,218622647,218628029,218629519,218630650,218632136,218633605,218634458,218635796,218636243,218636471	218608070,218615761,218616062,218618807,218621599,218622878,218628230,218629663,218630802,218632312,218634221,218634630,218635931,218636392,218637175	Gene ID= ENSG00000115556.13 TPM= 5.55 Transcript Type= NA
chr2	218607920	218637175	218607920	218637175	+	transcript6686.chr2.nic@PLCD4	transcript6686.chr2.nic	protein_coding	218607920,218615707,218615904,218618579,218621470,218622647,218628029,218629519,218632136,218633605,218634105,218634458,218635796,218636243,218636471	218608070,218615761,218616062,218618807,218621599,218622878,218628230,218629663,218632312,218633761,218634221,218634630,218635931,218636392,218637175	Gene ID= ENSG00000115556.13 TPM= 2.9 Transcript Type= NA
chr2	218607899	218629215	218607899	218629215	+	ENST00000469493.5@PLCD4	ENST00000469493.5	protein_coding	218607899,218615707,218615904,218618579,218621470,218622647,218628029	218608070,218615761,218616062,218618807,218621599,218622878,218629215	Gene ID= ENSG00000115556.13 TPM= 2.9 Transcript Type= retained_intron
chr2	218659717	218663443	218659717	218663443	+	transcript6704.chr2.nic@BCS1L	transcript6704.chr2.nic	protein_coding	218659717,218661406,218661759,218662197,218662510,218662883,218663134	218661307,218661520,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 2.12 Transcript Type= NA
chr2	218659718	218663443	218659718	218663443	+	transcript6707.chr2.nnic@BCS1L	transcript6707.chr2.nnic	protein_coding	218659718,218661759,218662197,218662510,218662883,218663134	218659743,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 3.09 Transcript Type= NA
chr2	218659656	218663443	218659656	218663443	+	ENST00000359273.7@BCS1L	ENST00000359273.7	protein_coding	218659656,218660939,218661406,218661759,218662197,218662510,218662883,218663134	218659743,218661307,218661545,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 16.6 Transcript Type= protein_coding
chr2	218659737	218663443	218659737	218663443	+	ENST00000412366.5@BCS1L	ENST00000412366.5	protein_coding	218659737,218660939,218661406,218661759,218662197,218662510,218662883,218663134	218659800,218661307,218661545,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 5.02 Transcript Type= protein_coding
chr2	218663864	218672411	218663864	218672411	-	ENST00000295704.6@RNF25	ENST00000295704.6	protein_coding	218671930,218668605,218668239,218668079,218667912,218666159,218665916,218665155,218664739,218663864	218672411,218668679,218668341,218668146,218667981,218666230,218666059,218665247,218664873,218664535	Gene ID= ENSG00000163481.7 TPM= 43.44 Transcript Type= protein_coding
chr2	218781711	218815288	218781711	218815288	+	transcript6717.chr2.nnic@CYP27A1	transcript6717.chr2.nnic	protein_coding	218781711,218809577,218812222,218812491,218812924,218814021,218814380,218814545,218814911	218782437,218809767,218812378,218812749,218813096,218814187,218814458,218814757,218815288	Gene ID= ENSG00000135929.8 TPM= 7 Transcript Type= NA
chr2	218781756	218815293	218781756	218815293	+	ENST00000258415.8@CYP27A1	ENST00000258415.8	protein_coding	218781756,218809577,218812222,218812552,218812924,218814021,218814380,218814545,218814911	218782437,218809767,218812421,218812749,218813096,218814187,218814458,218814757,218815293	Gene ID= ENSG00000135929.8 TPM= 114.15 Transcript Type= protein_coding
chr2	218820377	218822216	218820377	218822216	-	transcript6751.chr2.nnic@NA	transcript6751.chr2.nnic	NA	218820377	218822216	Gene ID= novel_gene_chr2_6752 TPM= 7.72 Transcript Type= NA
chr2	219075321	219160853	219075321	219160853	-	ENST00000356853.9@NHEJ1	ENST00000356853.9	protein_coding	219160720,219158186,219157472,219147657,219146680,219078089,219077246,219075321	219160853,219158362,219157684,219147795,219146738,219078206,219077364,219076455	Gene ID= ENSG00000187736.12 TPM= 22.2 Transcript Type= protein_coding
chr2	219075321	219160559	219075321	219160559	-	transcript6759.chr2.nic@NHEJ1	transcript6759.chr2.nic	protein_coding	219160510,219158186,219157472,219147657,219146680,219078089,219077246,219075321	219160559,219158362,219157684,219147795,219146738,219078206,219077364,219076455	Gene ID= ENSG00000187736.12 TPM= 1.93 Transcript Type= NA
chr2	219171897	219178161	219171897	219178161	-	transcript6765.chr2.nnic@CNPPD1	transcript6765.chr2.nnic	protein_coding	219178121,219176760,219176223,219175591,219174988,219174778,219174146,219173350,219171897	219178161,219176847,219176331,219175672,219175108,219174906,219174207,219173467,219173128	Gene ID= ENSG00000115649.15 TPM= 48.75 Transcript Type= NA
chr2	219171897	219176966	219171897	219176966	-	ENST00000360507.9@CNPPD1	ENST00000360507.9	protein_coding	219176760,219176223,219175591,219174988,219174778,219174146,219173350,219171897	219176966,219176331,219175672,219175108,219174906,219174207,219173467,219173128	Gene ID= ENSG00000115649.15 TPM= 221.54 Transcript Type= protein_coding
chr2	219178217	219185479	219178217	219185479	+	ENST00000430297.6@RETREG2	ENST00000430297.6	protein_coding	219178217,219178922,219179733,219180110,219180670,219181062,219181369,219181640,219182013	219178633,219179028,219179763,219180245,219180754,219181205,219181463,219181775,219185479	Gene ID= ENSG00000144567.10 TPM= 9.65 Transcript Type= protein_coding
chr2	219178227	219183492	219178227	219183492	+	ENST00000273048.2@RETREG2	ENST00000273048.2	protein_coding	219178227,219178922,219179733,219180198,219180670,219181062,219181369,219181640,219182013	219178633,219179028,219179763,219180245,219180754,219181205,219181463,219181775,219183492	Gene ID= ENSG00000144567.10 TPM= 12.55 Transcript Type= nonsense_mediated_decay
chr2	219206793	219209651	219206793	219209651	+	ENST00000289528.9@ZFAND2B	ENST00000289528.9	protein_coding	219206793,219207327,219207648,219207887,219208256,219208426,219208572,219208977,219209262	219207042,219207421,219207779,219208038,219208348,219208486,219208639,219209049,219209651	Gene ID= ENSG00000158552.12 TPM= 10.14 Transcript Type= protein_coding
chr2	219206793	219209647	219206793	219209647	+	ENST00000409594.5@ZFAND2B	ENST00000409594.5	protein_coding	219206793,219207327,219207648,219207887,219208256	219207042,219207421,219207779,219208038,219209647	Gene ID= ENSG00000158552.12 TPM= 2.41 Transcript Type= protein_coding
chr2	219209768	219218990	219209768	219218990	-	ENST00000265316.7@ABCB6	ENST00000265316.7	protein_coding	219218125,219217670,219216652,219216364,219215997,219214961,219214389,219214121,219213826,219213590,219213439,219213241,219213008,219212387,219210934,219210711,219210381,219210230,219209768	219218990,219217807,219216832,219216465,219216180,219215082,219214498,219214186,219213951,219213666,219213502,219213326,219213065,219212491,219211108,219210823,219210475,219210298,219210046	Gene ID= ENSG00000115657.12 TPM= 170.86 Transcript Type= protein_coding
chr2	219219382	219229631	219219382	219229631	-	transcript6809.chr2.nic@ATG9A	transcript6809.chr2.nic	protein_coding	219229535,219229010,219228434,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219382	219229631,219229174,219228485,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452	Gene ID= ENSG00000198925.10 TPM= 34.03 Transcript Type= NA
chr2	219219382	219229368	219219382	219229368	-	ENST00000409618.5@ATG9A	ENST00000409618.5	protein_coding	219229010,219228434,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219382	219229368,219228485,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452	Gene ID= ENSG00000198925.10 TPM= 30.17 Transcript Type= protein_coding
chr2	219219380	219229717	219219380	219229717	-	ENST00000396761.6@ATG9A	ENST00000396761.6	protein_coding	219229535,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219380	219229717,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452	Gene ID= ENSG00000198925.10 TPM= 51.89 Transcript Type= protein_coding
chr2	219229757	219236669	219229757	219236669	+	ENST00000323348.9@ANKZF1	ENST00000323348.9	protein_coding	219229757,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219234826,219235474,219235708,219236010,219236322	219229900,219230405,219232040,219232362,219232683,219233191,219233433,219233943,219234288,219235312,219235585,219235875,219236095,219236669	Gene ID= ENSG00000163516.13 TPM= 7.08 Transcript Type= protein_coding
chr2	219229828	219236651	219229828	219236651	+	transcript6819.chr2.nnic@ANKZF1	transcript6819.chr2.nnic	protein_coding	219229828,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219234826,219235708,219236010,219236322	219229900,219230405,219232040,219232362,219232683,219233191,219233433,219233943,219234288,219235312,219235875,219236095,219236651	Gene ID= ENSG00000163516.13 TPM= 2.25 Transcript Type= NA
chr2	219229838	219236651	219229838	219236651	+	ENST00000463792.5@ANKZF1	ENST00000463792.5	protein_coding	219229838,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219236010,219236322	219229900,219230350,219232040,219232362,219232683,219233191,219233433,219233943,219235875,219236095,219236651	Gene ID= ENSG00000163516.13 TPM= 3.21 Transcript Type= retained_intron
chr2	219245479	219248892	219245479	219248892	+	ENST00000396738.6@STK16	ENST00000396738.6	protein_coding	219245479,219245896,219246657,219247113,219247415,219247662,219248193,219248421	219245796,219246085,219246876,219247246,219247535,219247757,219248314,219248892	Gene ID= ENSG00000115661.13 TPM= 1.93 Transcript Type= protein_coding
chr2	219250284	219269778	219250284	219269778	-	transcript6848.chr2.nnic@TUBA4A	transcript6848.chr2.nnic	protein_coding	219269623,219253856,219252008,219251565,219250284	219269778,219253941,219252230,219251713,219251323	Gene ID= ENSG00000127824.13 TPM= 217.74 Transcript Type= NA
chr2	219249711	219254032	219249711	219254032	-	ENST00000248437.8@TUBA4A	ENST00000248437.8	protein_coding	219253856,219252008,219251565,219249711	219254032,219252230,219251713,219251323	Gene ID= ENSG00000127824.13 TPM= 44.04 Transcript Type= protein_coding
chr2	219249711	219254608	219249711	219254608	-	ENST00000392088.6@TUBA4A	ENST00000392088.6	protein_coding	219254095,219252008,219251565,219249711	219254608,219252230,219251713,219251323	Gene ID= ENSG00000127824.13 TPM= 12.18 Transcript Type= protein_coding
chr2	219250284	219271577	219250284	219271577	-	transcript6885.chr2.nnic@TUBA4A	transcript6885.chr2.nnic	protein_coding	219271372,219250284	219271577,219251170	Gene ID= ENSG00000127824.13 TPM= 15.86 Transcript Type= NA
chr2	219250281	219253917	219250281	219253917	-	transcript6888.chr2.nnic@NA	transcript6888.chr2.nnic	NA	219250281	219253917	Gene ID= novel_gene_chr2_6889 TPM= 4.83 Transcript Type= NA
chr2	219279344	219286898	219279344	219286898	+	ENST00000392086.8@DNAJB2	ENST00000392086.8	protein_coding	219279344,219279798,219280578,219281718,219281939,219282837,219283133,219283419,219284632,219285987	219279518,219279898,219280687,219281771,219282061,219282929,219283235,219283489,219284835,219286898	Gene ID= ENSG00000135924.15 TPM= 30.89 Transcript Type= protein_coding
chr2	219279267	219286900	219279267	219286900	+	ENST00000336576.9@DNAJB2	ENST00000336576.9	protein_coding	219279267,219279798,219280578,219281718,219281939,219282837,219283133,219283419,219284632	219279518,219279898,219280687,219281771,219282061,219282929,219283235,219283489,219286900	Gene ID= ENSG00000135924.15 TPM= 1.93 Transcript Type= protein_coding
chr2	219373546	219388015	219373546	219388015	-	ENST00000273075.8@DNPEP	ENST00000273075.8	protein_coding	219387759,219387070,219386892,219386665,219386286,219385968,219385631,219385424,219384366,219383131,219381979,219381545,219381335,219374855,219373546	219388015,219387163,219386980,219386778,219386411,219386098,219385706,219385531,219384443,219383214,219382139,219381584,219381436,219375022,219374342	Gene ID= ENSG00000123992.18 TPM= 5.79 Transcript Type= protein_coding
chr2	219374196	219387929	219374196	219387929	-	ENST00000373963.5@DNPEP	ENST00000373963.5	protein_coding	219387759,219387070,219386892,219386665,219386286,219385968,219385631,219385424,219384366,219383131,219381979,219381545,219381335,219374855,219374196	219387929,219387163,219386948,219386778,219386411,219386098,219385706,219385531,219384443,219383214,219382139,219381584,219381436,219375022,219374342	Gene ID= ENSG00000123992.18 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr2	219418377	219426739	219418377	219426739	+	ENST00000373960.3@DES	ENST00000373960.3	protein_coding	219418377,219420095,219420251,219420495,219420828,219421340,219423777,219425663,219425949	219419040,219420155,219420346,219420656,219420953,219421560,219423820,219425745,219426739	Gene ID= ENSG00000175084.11 TPM= 38241.96 Transcript Type= protein_coding
chr2	219426789	219427987	219426789	219427987	+	transcript7285.chr2.nnic@NA	transcript7285.chr2.nnic	NA	219426789	219427987	Gene ID= novel_gene_chr2_7286 TPM= 1.93 Transcript Type= NA
chr2	219427477	219429319	219427477	219429319	+	ENST00000623864.1@AC053503.6	ENST00000623864.1	TEC	219427477	219429319	Gene ID= ENSG00000280323.1 TPM= 5.79 Transcript Type= TEC
chr2	219434819	219466862	219434819	219466862	+	transcript7289.chr2.nic@SPEG	transcript7289.chr2.nic	protein_coding	219434819,219444653,219444825,219447974,219451136,219451625,219461882,219462298,219464433,219466057	219435365,219444742,219444984,219449271,219451279,219451807,219462057,219462386,219464608,219466862	Gene ID= ENSG00000072195.14 TPM= 46.65 Transcript Type= NA
chr2	219434819	219466862	219434819	219466862	+	transcript7291.chr2.nnic@SPEG	transcript7291.chr2.nnic	protein_coding	219434819,219444653,219444825,219447974,219451136,219461882,219462298,219464433,219466057	219435365,219444742,219444984,219449271,219451279,219462057,219462386,219464608,219466862	Gene ID= ENSG00000072195.14 TPM= 22.52 Transcript Type= NA
chr2	219434846	219493632	219434846	219493632	+	ENST00000312358.11@SPEG	ENST00000312358.11	protein_coding	219434846,219444653,219444825,219447974,219451136,219451625,219461882,219462298,219464433,219467174,219468578,219468859,219469156,219471868,219472227,219472890,219473504,219473728,219476870,219477277,219477689,219477905,219479144,219479783,219479962,219480671,219481304,219481638,219482784,219483098,219485346,219488194,219488498,219488778,219489054,219489336,219490409,219490733,219491794,219492111,219492594	219435365,219444742,219445161,219449271,219451279,219451807,219462057,219462386,219464608,219467434,219468736,219469048,219469379,219471987,219472331,219473096,219473627,219473903,219476982,219477445,219477785,219478105,219479201,219479860,219480140,219480697,219481456,219481680,219482852,219485072,219485477,219488310,219488665,219488900,219489221,219489939,219490648,219490956,219491869,219492260,219493632	Gene ID= ENSG00000072195.14 TPM= 380.65 Transcript Type= protein_coding
chr2	219491867	219498244	219491867	219498244	+	ENST00000412982.5@SPEG	ENST00000412982.5	protein_coding	219491867,219492111,219492594,219496355,219496809,219497720,219498051	219491869,219492260,219492753,219496482,219497116,219497861,219498244	Gene ID= ENSG00000072195.14 TPM= 2.9 Transcript Type= protein_coding
chr2	219497608	219498705	219497608	219498705	-	transcript7295.chr2.nnic@NA	transcript7295.chr2.nnic	NA	219497608	219498705	Gene ID= novel_gene_chr2_7296 TPM= 3.86 Transcript Type= NA
chr2	219498840	219506987	219498840	219506987	+	transcript7299.chr2.nnic@GMPPA	transcript7299.chr2.nnic	protein_coding	219498840,219499956,219500121,219501476,219501851,219502382,219504083,219504854,219505228,219505458,219505715,219505980,219506254,219506698	219498938,219500015,219500218,219501579,219502037,219502441,219504213,219504868,219505362,219505555,219505761,219506072,219506422,219506987	Gene ID= ENSG00000144591.18 TPM= 4.75 Transcript Type= NA
chr2	219498889	219506987	219498889	219506987	+	transcript7302.chr2.nnic@GMPPA	transcript7302.chr2.nnic	protein_coding	219498889,219499961,219500121,219501476,219501851,219502382,219504083,219504854,219505228,219505458,219505715,219505980,219506254,219506698	219499254,219500015,219500218,219501579,219502037,219502441,219504213,219504868,219505362,219505555,219505761,219506072,219506422,219506987	Gene ID= ENSG00000144591.18 TPM= 3.78 Transcript Type= NA
chr2	219498901	219506989	219498901	219506989	+	ENST00000358215.8@GMPPA	ENST00000358215.8	protein_coding	219498901,219499961,219500121,219501476,219501851,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698	219499254,219500015,219500218,219501579,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506989	Gene ID= ENSG00000144591.18 TPM= 2.58 Transcript Type= protein_coding
chr2	219498867	219506987	219498867	219506987	+	ENST00000313597.9@GMPPA	ENST00000313597.9	protein_coding	219498867,219499956,219500121,219501476,219501851,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698	219498938,219500015,219500218,219501579,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506987	Gene ID= ENSG00000144591.18 TPM= 1.61 Transcript Type= protein_coding
chr2	219538947	219543787	219538947	219543787	-	ENST00000243776.10@CHPF	ENST00000243776.10	protein_coding	219543225,219541616,219540946,219538947	219543787,219542189,219541125,219540642	Gene ID= ENSG00000123989.13 TPM= 42.47 Transcript Type= protein_coding
chr2	219544023	219550595	219544023	219550595	+	ENST00000373883.3@TMEM198	ENST00000373883.3	protein_coding	219544023,219544689,219547506,219549152,219549717	219544377,219544893,219548081,219549354,219550595	Gene ID= ENSG00000188760.10 TPM= 3.86 Transcript Type= protein_coding
chr2	219561722	219571649	219561722	219571649	-	transcript7316.chr2.nic@OBSL1	transcript7316.chr2.nic	protein_coding	219570221,219568055,219567273,219566830,219565242,219563355,219562402,219561722	219571649,219568324,219567969,219567126,219565514,219563627,219562674,219562008	Gene ID= ENSG00000124006.14 TPM= 5.79 Transcript Type= NA
chr2	219561722	219571289	219561722	219571289	-	ENST00000373873.8@OBSL1	ENST00000373873.8	protein_coding	219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219561722	219571289,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219562008	Gene ID= ENSG00000124006.14 TPM= 37.65 Transcript Type= protein_coding
chr2	219597860	219616451	219597860	219616451	+	ENST00000456909.5@STK11IP	ENST00000456909.5	protein_coding	219597860,219598094,219601235,219601641,219601988,219602468,219602705,219605608,219605956,219606195,219606476,219606712,219607053,219608047,219608583,219609097,219609363,219611604,219611955,219613128,219613752,219614161,219614476,219615094,219616044	219597923,219598180,219601440,219601715,219602083,219602575,219602776,219605734,219606059,219606290,219606517,219606858,219607137,219608430,219608788,219609213,219609540,219611834,219612058,219613225,219613930,219614242,219614546,219615341,219616451	Gene ID= ENSG00000144589.21 TPM= 17.38 Transcript Type= protein_coding
chr2	221425915	221572331	221425915	221572331	-	transcript7328.chr2.nic@EPHA4	transcript7328.chr2.nic	protein_coding	221572158,221568718,221563731,221501017,221482352,221457866,221456613,221455547,221446123,221443493,221442829,221437061,221436399,221434142,221429958,221426464,221425915	221572331,221568785,221564394,221501172,221482690,221457990,221456772,221455658,221446181,221443606,221443014,221437122,221436608,221434291,221430151,221426619,221426142	Gene ID= ENSG00000116106.11 TPM= 2.9 Transcript Type= NA
chr2	222316676	222320082	222316676	222320082	-	transcript7334.chr2.nnic@NA	transcript7334.chr2.nnic	NA	222316676	222320082	Gene ID= novel_gene_chr2_7335 TPM= 1.93 Transcript Type= NA
chr2	222571745	222656097	222571745	222656097	-	transcript7336.chr2.nnic@FARSB	transcript7336.chr2.nnic	protein_coding	222656016,222648740,222642851,222640862,222639580,222634391,222633199,222631604,222630113,222628837,222624714,222624272,222623650,222619645,222613811,222613267,222599928,222571745	222656097,222648795,222643005,222640931,222639695,222634541,222633307,222631674,222630174,222628888,222624775,222624479,222623730,222619737,222613928,222613380,222600083,222572022	Gene ID= ENSG00000116120.9 TPM= 5.15 Transcript Type= NA
chr2	222570536	222656337	222570536	222656337	-	ENST00000281828.6@FARSB	ENST00000281828.6	protein_coding	222656016,222648740,222642851,222640862,222639580,222634391,222633199,222631604,222630113,222628837,222624714,222624272,222623650,222619645,222613811,222599928,222570536	222656337,222648795,222643005,222640931,222639695,222634541,222633307,222631674,222630174,222628888,222624775,222624479,222623730,222619737,222613928,222600083,222572022	Gene ID= ENSG00000116120.9 TPM= 11.58 Transcript Type= protein_coding
chr2	222645616	222656097	222645616	222656097	-	transcript7351.chr2.nic@FARSB	transcript7351.chr2.nic	protein_coding	222656016,222645616	222656097,222648795	Gene ID= ENSG00000116120.9 TPM= 2.9 Transcript Type= NA
chr2	222860934	222944639	222860934	222944639	+	ENST00000357430.7@ACSL3	ENST00000357430.7	protein_coding	222860934,222887830,222900674,222908733,222916319,222918046,222919064,222921280,222922708,222923078,222924456,222927017,222928862,222930621,222933166,222934530,222941497	222861258,222887888,222900780,222909150,222916496,222918155,222919202,222921430,222922831,222923149,222924595,222927189,222928936,222930812,222933280,222934687,222944639	Gene ID= ENSG00000123983.13 TPM= 1.93 Transcript Type= protein_coding
chr2	222860942	222942222	222860942	222942222	+	ENST00000392066.7@ACSL3	ENST00000392066.7	protein_coding	222860942,222887830,222908733,222916319,222918046,222919064,222921280,222922708,222923078,222924456,222927017,222928862,222930621,222933166,222934530,222941497	222861258,222887888,222909150,222916496,222918155,222919202,222921430,222922831,222923149,222924595,222927189,222928936,222930812,222933280,222934687,222942222	Gene ID= ENSG00000123983.13 TPM= 12.55 Transcript Type= protein_coding
chr2	223051814	223055637	223051814	223055637	+	ENST00000281830.3@KCNE4	ENST00000281830.3	protein_coding	223051814,223052808	223052274,223055637	Gene ID= ENSG00000152049.6 TPM= 2.9 Transcript Type= protein_coding
chr2	223875347	223945387	223875347	223945387	-	ENST00000233055.8@WDFY1	ENST00000233055.8	protein_coding	223945148,223917943,223912253,223905947,223901183,223898958,223895504,223894234,223884648,223881942,223880124,223875347	223945387,223918010,223912326,223906001,223901333,223899070,223895630,223894339,223884749,223882072,223880232,223878730	Gene ID= ENSG00000085449.14 TPM= 19.31 Transcript Type= protein_coding
chr2	223957404	223967714	223957404	223967714	+	ENST00000258383.3@MRPL44	ENST00000258383.3	protein_coding	223957404,223959534,223963756,223966863	223957651,223960002,223963934,223967714	Gene ID= ENSG00000135900.3 TPM= 60.81 Transcript Type= protein_coding
chr2	223975112	224039319	223975112	224039319	-	ENST00000258405.8@SERPINE2	ENST00000258405.8	protein_coding	224039099,224001642,223998115,223991803,223984752,223982681,223980311,223977544,223975112	224039319,224001922,223998342,223992000,223984950,223982781,223980400,223977627,223975904	Gene ID= ENSG00000135919.12 TPM= 1.93 Transcript Type= protein_coding
chr2	224473902	224585503	224473902	224585503	-	transcript7387.chr2.nnic@CUL3	transcript7387.chr2.nnic	protein_coding	224585311,224584944,224557659,224535528,224514612,224513524,224511354,224506858,224505956,224503652,224502965,224500363,224497753,224495832,224481892,224478200,224473902	224585503,224585179,224557856,224535641,224514772,224513638,224511582,224507003,224506132,224503822,224503072,224500487,224497849,224495966,224482078,224478345,224474376	Gene ID= ENSG00000036257.12 TPM= 32.82 Transcript Type= NA
chr2	224470150	224585397	224470150	224585397	-	ENST00000344951.8@CUL3	ENST00000344951.8	protein_coding	224584944,224535528,224514612,224513524,224511354,224506858,224505956,224503652,224502965,224500363,224497753,224495832,224481892,224478200,224470150	224585397,224535641,224514772,224513638,224511582,224507003,224506132,224503822,224503072,224500487,224497849,224495966,224482078,224478345,224474376	Gene ID= ENSG00000036257.12 TPM= 1.93 Transcript Type= protein_coding
chr2	224473902	224585487	224473902	224585487	-	transcript7395.chr2.nic@CUL3	transcript7395.chr2.nic	protein_coding	224584944,224557659,224535528,224514612,224513524,224511354,224506858,224505956,224503652,224502965,224500363,224497753,224495832,224478200,224473902	224585487,224557856,224535641,224514772,224513638,224511582,224507003,224506132,224503822,224503072,224500487,224497849,224495966,224478345,224474376	Gene ID= ENSG00000036257.12 TPM= 6.76 Transcript Type= NA
chr2	224470150	224585348	224470150	224585348	-	ENST00000264414.8@CUL3	ENST00000264414.8	protein_coding	224584944,224557659,224535528,224514612,224513524,224511354,224506858,224505956,224503652,224502965,224500363,224497753,224495832,224481892,224478200,224470150	224585348,224557856,224535641,224514772,224513638,224511582,224507003,224506132,224503822,224503072,224500487,224497849,224495966,224482078,224478345,224474376	Gene ID= ENSG00000036257.12 TPM= 6.76 Transcript Type= protein_coding
chr2	226731317	226799759	226731317	226799759	-	ENST00000305123.5@IRS1	ENST00000305123.5	protein_coding	226794989,226731317	226799759,226736250	Gene ID= ENSG00000169047.5 TPM= 6.76 Transcript Type= protein_coding
chr2	226835936	226999215	226835936	226999215	+	ENST00000341329.7@RHBDD1	ENST00000341329.7	protein_coding	226835936,226864604,226867186,226906793,226908822,226914208,226995431	226836087,226865126,226867318,226906881,226908878,226914351,226999215	Gene ID= ENSG00000144468.16 TPM= 5.79 Transcript Type= protein_coding
chr2	226836068	226996530	226836068	226996530	+	transcript7417.chr2.nnic@RHBDD1	transcript7417.chr2.nnic	protein_coding	226836068,226864604,226867186,226995431	226837838,226865126,226867318,226996530	Gene ID= ENSG00000144468.16 TPM= 2.9 Transcript Type= NA
chr2	227164581	227291592	227164581	227291592	+	transcript7430.chr2.nnic@COL4A3	transcript7430.chr2.nnic	protein_coding	227164581,227237968,227240143,227244320,227244951,227245954,227246685,227247558,227248443,227251140,227251336,227253296,227253561,227254112,227254656,227256026,227256343,227257603,227259793,227261082,227263780,227266417,227266993,227269910,227270770,227272949,227276385,227277449,227279793,227280440,227280893,227282365,227283767,227284211,227289150,227289999,227290747	227164813,227238024,227240232,227244364,227244995,227246016,227246738,227247584,227248520,227251202,227251371,227253337,227253638,227254174,227254715,227256070,227256396,227257644,227259877,227261117,227263944,227266509,227267088,227269980,227270952,227273121,227276477,227277553,227279890,227280590,227281006,227282532,227283856,227284345,227289248,227290088,227291592	Gene ID= ENSG00000169031.18 TPM= 3.86 Transcript Type= NA
chr2	227164624	227291592	227164624	227291592	+	transcript7432.chr2.nnic@COL4A3	transcript7432.chr2.nnic	protein_coding	227164624,227237968,227240143,227244320,227244951,227245954,227246685,227247558,227248443,227251140,227251336,227253296,227253561,227254112,227254656,227256026,227256343,227257603,227259793,227261082,227263780,227266417,227266993,227269910,227270770,227272949,227276385,227277449,227279793,227280893,227282365,227283767,227284211,227289150,227289999,227290747	227164813,227238024,227240232,227244364,227244995,227246016,227246738,227247584,227248520,227251202,227251371,227253337,227253638,227254174,227254715,227256070,227256396,227257644,227259877,227261117,227263944,227266509,227267088,227269980,227270952,227273121,227276477,227277553,227279890,227281006,227282532,227283856,227284345,227289248,227290088,227291592	Gene ID= ENSG00000169031.18 TPM= 1.93 Transcript Type= NA
chr2	227325270	227357181	227325270	227357181	+	transcript7450.chr2.nic@MFF	transcript7450.chr2.nic	protein_coding	227325270,227328678,227329606,227330626,227332419,227340292,227342745,227347226,227355677,227356986	227325427,227328789,227329783,227330846,227332588,227340380,227342819,227347384,227355761,227357181	Gene ID= ENSG00000168958.19 TPM= 5.33 Transcript Type= NA
chr2	227325232	227357831	227325232	227357831	+	transcript7456.chr2.nic@MFF	transcript7456.chr2.nic	protein_coding	227325232,227328678,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357831	Gene ID= ENSG00000168958.19 TPM= 7.96 Transcript Type= NA
chr2	227325275	227357181	227325275	227357181	+	transcript7465.chr2.nnic@MFF	transcript7465.chr2.nnic	protein_coding	227325275,227328678,227330626,227332419,227340292,227342745,227352514,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227342819,227352573,227355761,227357181	Gene ID= ENSG00000168958.19 TPM= 5.33 Transcript Type= NA
chr2	227325239	227357833	227325239	227357833	+	ENST00000353339.7@MFF	ENST00000353339.7	protein_coding	227325239,227328678,227329606,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986	227325427,227328789,227329783,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357833	Gene ID= ENSG00000168958.19 TPM= 15.44 Transcript Type= protein_coding
chr2	227325276	227357812	227325276	227357812	+	ENST00000349901.11@MFF	ENST00000349901.11	protein_coding	227325276,227328678,227330626,227332419,227340292,227352514,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227352573,227355761,227357812	Gene ID= ENSG00000168958.19 TPM= 2.9 Transcript Type= protein_coding
chr2	227325268	227357833	227325268	227357833	+	ENST00000337110.11@MFF	ENST00000337110.11	protein_coding	227325268,227328678,227330626,227332419,227340292,227342745,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227342819,227355761,227357833	Gene ID= ENSG00000168958.19 TPM= 1.93 Transcript Type= protein_coding
chr2	227325250	227357215	227325250	227357215	+	ENST00000354503.10@MFF	ENST00000354503.10	protein_coding	227325250,227328678,227330626,227332419,227340292,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227355761,227357215	Gene ID= ENSG00000168958.19 TPM= 1.25 Transcript Type= protein_coding
chr2	227325262	227357151	227325262	227357151	+	ENST00000409616.5@MFF	ENST00000409616.5	protein_coding	227325262,227328678,227329606,227330626,227332419,227340292,227352514,227355677,227356986	227325427,227328789,227329783,227330846,227332588,227340380,227352573,227355761,227357151	Gene ID= ENSG00000168958.19 TPM= 1.93 Transcript Type= protein_coding
chr2	227472149	227556665	227472149	227556665	+	transcript7501.chr2.nic@AGFG1	transcript7501.chr2.nic	protein_coding	227472149,227491547,227519948,227523763,227524762,227531091,227532138,227533549,227534845,227536625,227536901,227550059,227551959,227553704,227554436	227472588,227491640,227520063,227523925,227524915,227531210,227532209,227533758,227535025,227536704,227536993,227550106,227552117,227553795,227556665	Gene ID= ENSG00000173744.17 TPM= 7.4 Transcript Type= NA
chr2	227472149	227556665	227472149	227556665	+	transcript7505.chr2.nic@AGFG1	transcript7505.chr2.nic	protein_coding	227472149,227491547,227519948,227523763,227524762,227531091,227533549,227534845,227536625,227536901,227550059,227551959,227553704,227554436	227472588,227491640,227520063,227523925,227524915,227531210,227533758,227535025,227536704,227536993,227550106,227552117,227553795,227556665	Gene ID= ENSG00000173744.17 TPM= 5.15 Transcript Type= NA
chr2	227472149	227556665	227472149	227556665	+	transcript7508.chr2.nic@AGFG1	transcript7508.chr2.nic	protein_coding	227472149,227491547,227519948,227523763,227524762,227533549,227534845,227536625,227536901,227550059,227551959,227553704,227554436	227472588,227491640,227520063,227523925,227524915,227533758,227535025,227536704,227536993,227550106,227552117,227553795,227556665	Gene ID= ENSG00000173744.17 TPM= 2.25 Transcript Type= NA
chr2	227472152	227554559	227472152	227554559	+	ENST00000409979.6@AGFG1	ENST00000409979.6	protein_coding	227472152,227491547,227519948,227523763,227524762,227531091,227532138,227533549,227534845,227536625,227536901,227551959,227553710,227554436	227472588,227491640,227520063,227523925,227524915,227531210,227532209,227533758,227535025,227536704,227536993,227552117,227553795,227554559	Gene ID= ENSG00000173744.17 TPM= 1.28 Transcript Type= protein_coding
chr2	229023974	229271265	229023974	229271265	-	ENST00000392054.7@PID1	ENST00000392054.7	protein_coding	229271014,229262683,229155818,229023974	229271265,229262893,229155964,229026108	Gene ID= ENSG00000153823.18 TPM= 3.38 Transcript Type= protein_coding
chr2	229023995	229271285	229023995	229271285	-	ENST00000392055.7@PID1	ENST00000392055.7	protein_coding	229271014,229155818,229023995	229271285,229155964,229026108	Gene ID= ENSG00000153823.18 TPM= 9.17 Transcript Type= protein_coding
chr2	229767212	229921766	229767212	229921766	-	transcript7523.chr2.nic@TRIP12	transcript7523.chr2.nic	protein_coding	229921564,229879982,229860406,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767212	229921766,229880128,229860531,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 4.18 Transcript Type= NA
chr2	229767212	229921965	229767212	229921965	-	transcript7524.chr2.nic@TRIP12	transcript7524.chr2.nic	protein_coding	229921880,229879982,229860406,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767212	229921965,229880128,229860531,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 3.21 Transcript Type= NA
chr2	229767212	229922059	229767212	229922059	-	transcript7530.chr2.nic@TRIP12	transcript7530.chr2.nic	protein_coding	229921880,229879982,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767212	229922059,229880128,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 10.94 Transcript Type= NA
chr2	229763838	229922009	229763838	229922009	-	ENST00000283943.9@TRIP12	ENST00000283943.9	protein_coding	229921880,229879982,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229763838	229922009,229880128,229859574,229840927,229836984,229830821,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805802,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 5.79 Transcript Type= protein_coding
chr2	229922496	230013109	229922496	230013109	+	ENST00000283946.7@FBXO36	ENST00000283946.7	protein_coding	229922496,229976241,229996751,230010696	229922609,229976349,229996923,230013109	Gene ID= ENSG00000153832.11 TPM= 2.9 Transcript Type= protein_coding
chr2	230034974	230068928	230034974	230068928	-	transcript7546.chr2.nnic@SLC16A14	transcript7546.chr2.nnic	protein_coding	230068555,230059094,230045745,230034974	230068928,230059366,230046724,230037531	Gene ID= ENSG00000163053.10 TPM= 1.93 Transcript Type= NA
chr2	230209939	230219964	230209939	230219964	-	transcript7548.chr2.nic@SP110	transcript7548.chr2.nic	protein_coding	230219874,230216781,230214950,230212761,230212347,230211470,230209939	230219964,230216928,230215118,230213027,230212430,230211553,230210008	Gene ID= ENSG00000135899.17 TPM= 1.93 Transcript Type= NA
chr2	230327184	230403732	230327184	230403732	+	ENST00000415673.6@SP140L	ENST00000415673.6	protein_coding	230327184,230328757,230357805,230358964,230361614,230370908,230371598,230383510,230385224,230388559,230389919,230392087,230393414,230396757,230400127,230400955,230401366,230401664,230402798	230327301,230328831,230357967,230359132,230361697,230370967,230371651,230383575,230385304,230388633,230390023,230392229,230393461,230396798,230400242,230401063,230401443,230401807,230403732	Gene ID= ENSG00000185404.16 TPM= 1.93 Transcript Type= protein_coding
chr2	230415942	230516527	230415942	230516527	+	ENST00000264052.9@SP100	ENST00000264052.9	protein_coding	230415942,230417591,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015,230473324,230474394,230494416,230498461,230503066,230504186,230506303,230507993,230511125,230515095	230416328,230417665,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467215,230469096,230470098,230473440,230474447,230494460,230498535,230503110,230504290,230506445,230508031,230511166,230516527	Gene ID= ENSG00000067066.16 TPM= 1.28 Transcript Type= protein_coding
chr2	230416156	230470534	230416156	230470534	+	ENST00000427101.6@SP100	ENST00000427101.6	protein_coding	230416156,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015	230416328,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467206,230469096,230470534	Gene ID= ENSG00000067066.16 TPM= 2.25 Transcript Type= protein_coding
chr2	230416247	230470517	230416247	230470517	+	ENST00000409341.5@SP100	ENST00000409341.5	protein_coding	230416247,230417591,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015	230416328,230417665,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467215,230469096,230470517	Gene ID= ENSG00000067066.16 TPM= 2.25 Transcript Type= protein_coding
chr2	230712845	230821075	230712845	230821075	+	ENST00000258418.9@CAB39	ENST00000258418.9	protein_coding	230712845,230759959,230790872,230793213,230798729,230810263,230814049,230817754,230818516	230713230,230760115,230791036,230793331,230798897,230810322,230814114,230817897,230821075	Gene ID= ENSG00000135932.10 TPM= 260.63 Transcript Type= protein_coding
chr2	230712861	230715392	230712861	230715392	+	transcript7577.chr2.nnic@NA	transcript7577.chr2.nnic	NA	230712861	230715392	Gene ID= novel_gene_chr2_7578 TPM= 2.9 Transcript Type= NA
chr2	230864900	230879247	230864900	230879247	+	ENST00000326427.10@ITM2C	ENST00000326427.10	protein_coding	230864900,230873417,230875620,230876857,230877400,230878008	230865145,230873557,230875808,230876967,230877550,230879247	Gene ID= ENSG00000135916.15 TPM= 38.61 Transcript Type= protein_coding
chr2	230864948	230879247	230864948	230879247	+	ENST00000335005.10@ITM2C	ENST00000335005.10	protein_coding	230864948,230875620,230876857,230877400,230878008	230865145,230875808,230876967,230877550,230879247	Gene ID= ENSG00000135916.15 TPM= 3.86 Transcript Type= protein_coding
chr2	231056864	231172827	231056864	231172827	+	ENST00000308696.10@PSMD1	ENST00000308696.10	protein_coding	231056864,231061267,231062248,231062506,231066906,231070025,231072189,231075511,231077034,231078659,231079536,231080141,231082883,231083567,231085019,231087117,231138736,231146240,231153564,231161340,231163635,231165200,231165871,231170566,231172535	231057041,231061310,231062321,231062675,231067111,231070168,231072415,231075571,231077162,231078747,231079614,231080314,231082994,231083763,231085114,231087181,231138850,231146356,231153666,231161509,231163727,231165286,231166017,231170721,231172827	Gene ID= ENSG00000173692.12 TPM= 14.32 Transcript Type= protein_coding
chr2	231056867	231165235	231056867	231165235	+	ENST00000431051.5@PSMD1	ENST00000431051.5	protein_coding	231056867,231061267,231062248,231066906,231070025,231072189,231075511,231077034,231078659,231079536,231080141,231082883,231083567,231085019,231087117,231138736,231146240,231153564,231161340,231163635,231165200	231057041,231061310,231062321,231067111,231070168,231072415,231075571,231077162,231078747,231079614,231080314,231082994,231083763,231085114,231087181,231138850,231146356,231153666,231161509,231163727,231165235	Gene ID= ENSG00000173692.12 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr2	231453531	231464594	231453531	231464594	-	ENST00000322723.8@NCL	ENST00000322723.8	protein_coding	231464336,231463200,231461540,231460669,231460478,231460152,231459001,231458266,231457643,231457001,231456631,231456010,231455401,231453531	231464594,231463316,231462017,231460866,231460564,231460293,231459125,231458389,231457800,231457124,231456764,231456136,231455624,231455267	Gene ID= ENSG00000115053.15 TPM= 424.09 Transcript Type= protein_coding
chr2	231705673	231707007	231705673	231707007	-	transcript7665.chr2.nnic@NA	transcript7665.chr2.nnic	NA	231705673	231707007	Gene ID= novel_gene_chr2_7666 TPM= 2.9 Transcript Type= NA
chr2	231708509	231713541	231708509	231713541	+	ENST00000409115.7@PTMA	ENST00000409115.7	protein_coding	231708509,231711348,231711890,231712443,231712804	231708751,231711419,231711983,231712516,231713541	Gene ID= ENSG00000187514.16 TPM= 119.7 Transcript Type= protein_coding
chr2	231710462	231713536	231710462	231713536	+	transcript7654.chr2.nic@PTMA	transcript7654.chr2.nic	protein_coding	231710462,231711348,231711890,231712443,231712804	231710676,231711419,231711983,231712516,231713536	Gene ID= ENSG00000187514.16 TPM= 6.76 Transcript Type= NA
chr2	231710467	231713536	231710467	231713536	+	transcript7660.chr2.nic@PTMA	transcript7660.chr2.nic	protein_coding	231710467,231711890,231712443,231712804	231711419,231711983,231712516,231713536	Gene ID= ENSG00000187514.16 TPM= 7.72 Transcript Type= NA
chr2	231708536	231713289	231708536	231713289	+	ENST00000409683.5@PTMA	ENST00000409683.5	protein_coding	231708536,231711348,231711890,231712452,231712804	231708751,231711419,231711983,231712516,231713289	Gene ID= ENSG00000187514.16 TPM= 3.86 Transcript Type= protein_coding
chr2	231708516	231713536	231708516	231713536	+	ENST00000341369.11@PTMA	ENST00000341369.11	protein_coding	231708516,231711348,231711887,231712443,231712804	231708751,231711419,231711983,231712516,231713536	Gene ID= ENSG00000187514.16 TPM= 19.31 Transcript Type= protein_coding
chr2	231708525	231712860	231708525	231712860	+	transcript7663.chr2.nnic@NA	transcript7663.chr2.nnic	NA	231708525	231712860	Gene ID= novel_gene_chr2_7664 TPM= 1.93 Transcript Type= NA
chr2	231732425	231781309	231732425	231781309	-	ENST00000287600.8@PDE6D	ENST00000287600.8	protein_coding	231781065,231739100,231738013,231737187,231732425	231781309,231739188,231738138,231737292,231733033	Gene ID= ENSG00000156973.13 TPM= 6.76 Transcript Type= protein_coding
chr2	231786445	231808723	231786445	231808723	+	ENST00000410017.5@COPS7B	ENST00000410017.5	protein_coding	231786445,231788555,231791733,231794263,231796106,231798859,231801140,231807487	231786538,231788732,231791808,231794351,231796308,231798964,231801207,231808723	Gene ID= ENSG00000144524.17 TPM= 1.93 Transcript Type= protein_coding
chr2	231786414	231809253	231786414	231809253	+	ENST00000350033.7@COPS7B	ENST00000350033.7	protein_coding	231786414,231788555,231791733,231794263,231796106,231798859,231807487	231786538,231788732,231791808,231794351,231796308,231798964,231809253	Gene ID= ENSG00000144524.17 TPM= 6.76 Transcript Type= protein_coding
chr2	232337543	232340930	232337543	232340930	+	transcript7676.chr2.nnic@NA	transcript7676.chr2.nnic	NA	232337543	232340930	Gene ID= novel_gene_chr2_7677 TPM= 1.93 Transcript Type= NA
chr2	232522282	232525712	232522282	232525712	+	transcript7685.chr2.nic@PRSS56	transcript7685.chr2.nic	protein_coding	232522282,232522702,232523060,232523416,232523769,232524039,232524307,232524738,232525216	232522614,232522861,232523202,232523578,232523945,232524203,232524369,232524844,232525712	Gene ID= ENSG00000237412.6 TPM= 11.1 Transcript Type= NA
chr2	232524404	232525712	232524404	232525712	+	transcript7692.chr2.nnic@PRSS56	transcript7692.chr2.nnic	protein_coding	232524404,232524738,232525216	232524635,232524844,232525712	Gene ID= ENSG00000237412.6 TPM= 3.86 Transcript Type= NA
chr2	232525687	232529198	232525687	232529198	-	transcript7694.chr2.nnic@NA	transcript7694.chr2.nnic	NA	232525687	232529198	Gene ID= novel_gene_chr2_7695 TPM= 1.93 Transcript Type= NA
chr2	232526160	232536665	232526160	232536665	+	transcript7681.chr2.nnic@CHRND	transcript7681.chr2.nnic	protein_coding	232526160,232526529,232527401,232528262,232528501,232528862,232531352,232531542,232533931,232534224,232535130	232526267,232526674,232527445,232528371,232528656,232528971,232531463,232531656,232534135,232534342,232536665	Gene ID= ENSG00000135902.9 TPM= 11.58 Transcript Type= NA
chr2	232525993	232536667	232525993	232536667	+	ENST00000441621.6@CHRND	ENST00000441621.6	protein_coding	232525993,232526529,232527401,232528262,232528501,232529939,232531352,232531542,232533931,232534224,232535130	232526267,232526674,232527445,232528371,232528656,232530139,232531463,232531656,232534135,232534342,232536667	Gene ID= ENSG00000135902.9 TPM= 17.38 Transcript Type= nonsense_mediated_decay
chr2	232526160	232536665	232526160	232536665	+	ENST00000543200.5@CHRND	ENST00000543200.5	protein_coding	232526160,232526529,232528262,232528501,232528862,232529939,232531352,232531542,232533931,232534224,232535130	232526267,232526674,232528371,232528656,232528971,232530139,232531463,232531656,232534135,232534342,232536665	Gene ID= ENSG00000135902.9 TPM= 17.38 Transcript Type= protein_coding
chr2	232543311	232548071	232543311	232548071	+	transcript7714.chr2.nic@CHRNG	transcript7714.chr2.nic	protein_coding	232543311,232543585,232544367,232544772,232545543	232543389,232543699,232544580,232544902,232548071	Gene ID= ENSG00000196811.11 TPM= 3.86 Transcript Type= NA
chr2	232547968	232550592	232547968	232550592	-	ENST00000408957.4@TIGD1	ENST00000408957.4	protein_coding	232547968	232550592	Gene ID= ENSG00000221944.6 TPM= 2.9 Transcript Type= protein_coding
chr2	232550688	232581427	232550688	232581427	+	transcript7700.chr2.nnic@EIF4E2	transcript7700.chr2.nnic	protein_coding	232550688,232556416,232557884,232564247,232566829,232567078,232572112,232574263,232580904	232550744,232556530,232558018,232564351,232566981,232567214,232574136,232574341,232581427	Gene ID= ENSG00000135930.13 TPM= 3.86 Transcript Type= NA
chr2	232550052	232569210	232550052	232569210	+	ENST00000258416.7@EIF4E2	ENST00000258416.7	protein_coding	232550052,232556416,232557884,232564247,232566829,232567078,232568945	232550744,232556530,232558018,232564351,232566981,232567214,232569210	Gene ID= ENSG00000135930.13 TPM= 36.2 Transcript Type= protein_coding
chr2	232550691	232558824	232550691	232558824	+	ENST00000498242.5@EIF4E2	ENST00000498242.5	protein_coding	232550691,232556416,232557884	232550744,232556530,232558824	Gene ID= ENSG00000135930.13 TPM= 4.83 Transcript Type= retained_intron
chr2	232550683	232583644	232550683	232583644	+	ENST00000409098.5@EIF4E2	ENST00000409098.5	protein_coding	232550683,232556416,232557884,232564247,232566829,232567078,232580904	232550744,232556530,232558018,232564351,232566981,232567214,232583644	Gene ID= ENSG00000135930.13 TPM= 11.58 Transcript Type= protein_coding
chr2	232550683	232583642	232550683	232583642	+	ENST00000409514.5@EIF4E2	ENST00000409514.5	protein_coding	232550683,232556416,232557884,232564247,232566829,232567078,232574263,232580904	232550744,232556530,232558018,232564351,232566981,232567214,232574341,232583642	Gene ID= ENSG00000135930.13 TPM= 9.65 Transcript Type= protein_coding
chr2	232633228	232682781	232633228	232682781	+	ENST00000264059.7@EFHD1	ENST00000264059.7	protein_coding	232633228,232662802,232672309,232681585	232634006,232662949,232672443,232682781	Gene ID= ENSG00000115468.11 TPM= 14.48 Transcript Type= protein_coding
chr2	232697307	232858608	232697307	232858608	+	transcript7737.chr2.nic@GIGYF2	transcript7737.chr2.nic	protein_coding	232697307,232700585,232703424,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232700654,232703489,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858608	Gene ID= ENSG00000204120.14 TPM= 9.2 Transcript Type= NA
chr2	232697307	232858612	232697307	232858612	+	ENST00000373563.8@GIGYF2	ENST00000373563.8	protein_coding	232697307,232703424,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232703489,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858612	Gene ID= ENSG00000204120.14 TPM= 2.92 Transcript Type= protein_coding
chr2	232697307	232819923	232697307	232819923	+	transcript7752.chr2.nic@GIGYF2	transcript7752.chr2.nic	protein_coding	232697307,232700585,232703424,232734417,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827	232697392,232700654,232703489,232734486,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819923	Gene ID= ENSG00000204120.14 TPM= 2.12 Transcript Type= NA
chr2	232697331	232858627	232697331	232858627	+	ENST00000409547.5@GIGYF2	ENST00000409547.5	protein_coding	232697331,232700585,232703424,232734417,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232700654,232703489,232734486,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858627	Gene ID= ENSG00000204120.14 TPM= 5.82 Transcript Type= protein_coding
chr2	233251571	233295674	233251571	233295674	+	ENST00000392017.8@ATG16L1	ENST00000392017.8	protein_coding	233251571,233256102,233263130,233263992,233264892,233270002,233272966,233273721,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257	233251942,233256195,233263235,233264065,233265143,233270067,233273052,233273777,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295674	Gene ID= ENSG00000085978.21 TPM= 3.86 Transcript Type= protein_coding
chr2	233251640	233295666	233251640	233295666	+	transcript7775.chr2.nnic@ATG16L1	transcript7775.chr2.nnic	protein_coding	233251640,233256102,233263130,233263992,233264892,233270002,233272966,233273991,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257	233251942,233256195,233263235,233264065,233265143,233270067,233273052,233274041,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295666	Gene ID= ENSG00000085978.21 TPM= 3.86 Transcript Type= NA
chr2	233251714	233295674	233251714	233295674	+	ENST00000392018.1@ATG16L1	ENST00000392018.1	protein_coding	233251714,233256102,233263130,233263992,233264892,233270002,233272966,233273721,233273991,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257	233251942,233256195,233263235,233264065,233265143,233270067,233273052,233273777,233274041,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295674	Gene ID= ENSG00000085978.21 TPM= 8.69 Transcript Type= protein_coding
chr2	233419171	233472096	233419171	233472096	+	transcript7787.chr2.nic@DGKD	transcript7787.chr2.nic	protein_coding	233419171,233434380,233434769,233435818,233436316,233437377,233438217,233441887,233445623,233446712,233448087,233448276,233449103,233449982,233450922,233451964,233454763,233456899,233457221,233458284,233459757,233460194,233462348,233462643,233464164,233467086,233468423,233469371	233419421,233434484,233434901,233435924,233436441,233437479,233438379,233441995,233445762,233446796,233448181,233448375,233449376,233450131,233451050,233452060,233454873,233456995,233457328,233458397,233459891,233460345,233462459,233462735,233464283,233467203,233468553,233472096	Gene ID= ENSG00000077044.10 TPM= 161.96 Transcript Type= NA
chr2	233354507	233472100	233354507	233472100	+	ENST00000264057.6@DGKD	ENST00000264057.6	protein_coding	233354507,233388257,233390403,233434380,233434769,233435818,233436316,233437377,233438217,233441887,233445623,233446712,233448087,233448276,233449103,233449982,233450922,233451964,233454763,233456899,233457221,233458284,233459757,233460194,233462348,233462643,233464164,233467086,233468423,233469371	233354674,233388367,233390483,233434484,233434901,233435924,233436441,233437479,233438379,233441995,233445762,233446796,233448181,233448375,233449376,233450131,233451050,233452060,233454873,233456995,233457328,233458397,233459891,233460345,233462459,233462735,233464283,233467203,233468553,233472100	Gene ID= ENSG00000077044.10 TPM= 158.5 Transcript Type= protein_coding
chr2	233475526	233566782	233475526	233566782	-	ENST00000251722.10@USP40	ENST00000251722.10	protein_coding	233566684,233565356,233562736,233559811,233556855,233554380,233551376,233549101,233542268,233540662,233533479,233529431,233527407,233525478,233524492,233523170,233520991,233519614,233512569,233511709,233510049,233499879,233498548,233496758,233493425,233491167,233489365,233488239,233485767,233485531,233481203,233475526	233566782,233565573,233562803,233559924,233557019,233554526,233551519,233549229,233542363,233540766,233533779,233529512,233527578,233525562,233524562,233523489,233521114,233519671,233512622,233511797,233510135,233499915,233498612,233496832,233493551,233491261,233489483,233488304,233485977,233485626,233481297,233477503	Gene ID= ENSG00000085982.13 TPM= 6.76 Transcript Type= protein_coding
chr2	234495127	234497086	234495127	234497086	-	transcript7816.chr2.nnic@NA	transcript7816.chr2.nnic	NA	234495127	234497086	Gene ID= novel_gene_chr2_7817 TPM= 3.86 Transcript Type= NA
chr2	234951973	235055714	234951973	235055714	+	ENST00000392011.6@SH3BP4	ENST00000392011.6	protein_coding	234951973,234995303,235034871,235040888,235052562,235053592	234952170,234995376,235035120,235043247,235052750,235055714	Gene ID= ENSG00000130147.15 TPM= 5.79 Transcript Type= protein_coding
chr2	235709177	236131800	235709177	236131800	+	ENST00000614409.4@AGAP1	ENST00000614409.4	protein_coding	235709177,235717557,235740963,235744698,235750354,235797759,235799367,235807239,235883345,235908738,235968462,236036561,236040751,236049059,236120192,236123919	235709237,235717644,235741048,235744839,235750488,235797886,235799522,235807331,235883449,235908906,235968623,236036715,236040841,236049281,236120447,236131800	Gene ID= ENSG00000157985.18 TPM= 4.34 Transcript Type= protein_coding
chr2	235709177	235913826	235709177	235913826	+	transcript7827.chr2.nnic@AGAP1	transcript7827.chr2.nnic	protein_coding	235709177,235717557,235740963,235744698,235750354,235797759,235799367,235807239,235883345,235908738,235913662	235709237,235717644,235741048,235744839,235750488,235797886,235799522,235807331,235883449,235908906,235913826	Gene ID= ENSG00000157985.18 TPM= 3.38 Transcript Type= NA
chr2	236569641	236582358	236569641	236582358	+	ENST00000272928.3@ACKR3	ENST00000272928.3	protein_coding	236569641,236580440	236569924,236582358	Gene ID= ENSG00000144476.5 TPM= 22.2 Transcript Type= protein_coding
chr2	237085882	237098618	237085882	237098618	+	ENST00000392008.6@COPS8	ENST00000392008.6	protein_coding	237085882,237086732,237087127,237088605,237089862,237094090,237095822,237096822,237097663	237086042,237086796,237087197,237088653,237089994,237094197,237095884,237096869,237098618	Gene ID= ENSG00000198612.10 TPM= 2.9 Transcript Type= protein_coding
chr2	237097976	237100137	237097976	237100137	+	transcript7850.chr2.nnic@NA	transcript7850.chr2.nnic	NA	237097976	237100137	Gene ID= novel_gene_chr2_7851 TPM= 1.93 Transcript Type= NA
chr2	237358563	237414170	237358563	237414170	-	transcript7853.chr2.nic@COL6A3	transcript7853.chr2.nic	protein_coding	237413953,237396727,237380915,237376772,237374412,237371732,237368563,237366687,237365698,237364350,237363253,237361739,237361121,237360088,237359362,237359206,237359035,237358563	237414170,237396847,237381499,237377344,237375020,237372337,237369177,237367286,237366035,237364428,237363398,237361831,237361174,237360159,237359388,237359250,237359088,237358583	Gene ID= ENSG00000163359.15 TPM= 6.27 Transcript Type= NA
chr2	237324085	237414148	237324085	237414148	-	ENST00000472056.5@COL6A3	ENST00000472056.5	protein_coding	237413953,237396727,237380915,237376772,237374412,237371732,237368563,237366687,237365698,237364350,237363253,237361739,237361121,237360088,237359362,237359206,237359035,237358521,237357817,237357338,237354899,237353341,237352522,237351130,237350147,237348613,237348349,237347807,237346503,237345181,237345058,237344941,237344350,237342065,237340452,237339015,237336135,237334626,237333450,237325560,237324085	237414148,237396847,237381499,237377344,237375020,237372337,237369177,237367286,237366035,237364428,237363398,237361831,237361174,237360159,237359388,237359250,237359088,237358583,237357882,237357391,237354934,237353403,237352584,237351192,237350209,237348663,237348384,237347869,237346565,237345213,237345094,237344952,237344843,237342161,237341150,237339117,237336532,237334889,237333548,237325724,237324814	Gene ID= ENSG00000163359.15 TPM= 6.27 Transcript Type= protein_coding
chr2	237485707	237487152	237485707	237487152	-	transcript7859.chr2.nnic@NA	transcript7859.chr2.nnic	NA	237485707	237487152	Gene ID= novel_gene_chr2_7860 TPM= 1.93 Transcript Type= NA
chr2	237487168	237555318	237487168	237555318	+	ENST00000264605.7@MLPH	ENST00000264605.7	protein_coding	237487168,237493403,237510574,237510989,237518539,237519910,237525601,237527377,237534564,237540348,237540802,237542567,237546606,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237520029,237525805,237527516,237534647,237540533,237540957,237542659,237546683,237549278,237552437,237555318	Gene ID= ENSG00000115648.13 TPM= 6.76 Transcript Type= protein_coding
chr2	237487246	237553994	237487246	237553994	+	transcript7862.chr2.nic@MLPH	transcript7862.chr2.nic	protein_coding	237487246,237493403,237510574,237510989,237518539,237519910,237525601,237527377,237534564,237540348,237542567,237546606,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237520029,237525805,237527516,237534647,237540533,237542659,237546683,237549278,237552437,237553994	Gene ID= ENSG00000115648.13 TPM= 5.79 Transcript Type= NA
chr2	237627554	237780315	237627554	237780315	+	transcript7881.chr2.nnic@LRRFIP1	transcript7881.chr2.nnic	protein_coding	237627554,237708544,237714259,237717762,237719523,237720772,237723548,237727876,237729780,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237769943,237772081,237772866,237774358,237779422	237627740,237708630,237714276,237717809,237719567,237720822,237723586,237727935,237729842,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 11.76 Transcript Type= NA
chr2	237692162	237780315	237692162	237780315	+	transcript7906.chr2.nnic@LRRFIP1	transcript7906.chr2.nnic	protein_coding	237692162,237708544,237714259,237717762,237719523,237720772,237723548,237727876,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237769943,237772081,237772866,237774358,237779422	237692521,237708630,237714276,237717809,237719567,237720822,237723586,237727935,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 10.55 Transcript Type= NA
chr2	237627554	237780315	237627554	237780315	+	transcript7917.chr2.nnic@LRRFIP1	transcript7917.chr2.nnic	protein_coding	237627554,237708544,237714259,237717762,237719523,237720772,237727876,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237769943,237772081,237772866,237774358,237779422	237627740,237708630,237714276,237717809,237719567,237720822,237727935,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 18.76 Transcript Type= NA
chr2	237692162	237780315	237692162	237780315	+	transcript7926.chr2.nnic@LRRFIP1	transcript7926.chr2.nnic	protein_coding	237692162,237708544,237714259,237717762,237719523,237720772,237727876,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237769943,237772081,237772866,237774358,237779422	237692521,237708630,237714276,237717809,237719567,237720822,237727935,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 7.17 Transcript Type= NA
chr2	237627554	237780315	237627554	237780315	+	transcript7930.chr2.nnic@LRRFIP1	transcript7930.chr2.nnic	protein_coding	237627554,237708544,237714259,237717762,237719523,237720772,237723548,237727876,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237760064,237769943,237772081,237772866,237774358,237779422	237627740,237708630,237714276,237717809,237719567,237720822,237723586,237727935,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 11.76 Transcript Type= NA
chr2	237627554	237780315	237627554	237780315	+	transcript7945.chr2.nnic@LRRFIP1	transcript7945.chr2.nnic	protein_coding	237627554,237708544,237714259,237717762,237719523,237720772,237727876,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237760064,237769943,237772081,237772866,237774358,237779422	237627740,237708630,237714276,237717809,237719567,237720822,237727935,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 9.83 Transcript Type= NA
chr2	237627576	237780315	237627576	237780315	+	ENST00000308482.13@LRRFIP1	ENST00000308482.13	protein_coding	237627576,237708544,237714259,237717762,237719523,237720772,237723548,237727876,237733774,237735268,237739232,237748364,237749199,237751200,237753309,237756095,237757456,237758729,237760064,237769943,237772081,237772866,237774358,237779422	237627740,237708630,237714276,237717809,237719567,237720822,237723586,237727935,237733818,237735333,237739309,237748399,237749324,237751271,237753479,237756187,237757548,237758821,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 6.93 Transcript Type= protein_coding
chr2	237785648	237785756	237785648	237785756	+	transcript8007.chr2.nnic@NA	transcript8007.chr2.nnic	NA	237785648	237785756	Gene ID= novel_gene_chr2_8008 TPM= 1.93 Transcript Type= NA
chr2	237859544	237912114	237859544	237912114	+	ENST00000254661.4@RAMP1	ENST00000254661.4	protein_coding	237859544,237877224,237911528	237859727,237877362,237912114	Gene ID= ENSG00000132329.10 TPM= 139.97 Transcript Type= protein_coding
chr2	237966955	238042595	237966955	238042595	+	ENST00000272930.8@UBE2F	ENST00000272930.8	protein_coding	237966955,237973092,237987963,237994744,238016566,238025342,238030556,238032222,238035878,238041288	237967132,237973225,237987992,237994809,238016633,238025412,238030613,238032254,238035940,238042595	Gene ID= ENSG00000184182.18 TPM= 18.34 Transcript Type= protein_coding
chr2	237966987	238051653	237966987	238051653	+	transcript8032.chr2.nnic@UBE2F	transcript8032.chr2.nnic	protein_coding	237966987,237973092,237987963,237994744,238016566,238025342,238030556,238032222,238035878,238050308	237967132,237973225,237987992,237994809,238016633,238025412,238030613,238032254,238035940,238051653	Gene ID= ENSG00000184182.18 TPM= 2.9 Transcript Type= NA
chr2	237967082	238041917	237967082	238041917	+	ENST00000409332.5@UBE2F	ENST00000409332.5	protein_coding	237967082,237973092,237987963,238016566,238025342,238030556,238032222,238035878,238041288	237967132,237973225,237987992,238016633,238025412,238030613,238032254,238035940,238041917	Gene ID= ENSG00000184182.18 TPM= 2.9 Transcript Type= protein_coding
chr2	238060889	238099413	238060889	238099413	+	ENST00000254663.10@SCLY	ENST00000254663.10	protein_coding	238060889,238064357,238068065,238069297,238081709,238082045,238083248,238091218,238093861,238094420,238096801,238098202	238061143,238064469,238068165,238069477,238081836,238082209,238083354,238091254,238093944,238094522,238096876,238099413	Gene ID= ENSG00000132330.16 TPM= 6.76 Transcript Type= protein_coding
chr2	238060980	238099412	238060980	238099412	+	transcript8042.chr2.nic@SCLY	transcript8042.chr2.nic	protein_coding	238060980,238064357,238081709,238082045,238083248,238091218,238093861,238094420,238096801,238098202	238061143,238064469,238081836,238082209,238083354,238091254,238093944,238094522,238096876,238099412	Gene ID= ENSG00000132330.16 TPM= 3.86 Transcript Type= NA
chr2	238138646	238144395	238138646	238144395	+	transcript8077.chr2.nic@KLHL30	transcript8077.chr2.nic	protein_coding	238138646,238140685	238138758,238144395	Gene ID= ENSG00000168427.8 TPM= 2.9 Transcript Type= NA
chr2	238151781	238156068	238151781	238156068	+	transcript8078.chr2.nnic@KLHL30	transcript8078.chr2.nnic	protein_coding	238151781,238155485	238154802,238156068	Gene ID= ENSG00000168427.8 TPM= 46.33 Transcript Type= NA
chr2	238138722	238152947	238138722	238152947	+	ENST00000409223.1@KLHL30	ENST00000409223.1	protein_coding	238138722,238140685,238142799,238144902,238145677,238147834,238149007,238150814	238138758,238141528,238142931,238144988,238145832,238148022,238149152,238152947	Gene ID= ENSG00000168427.8 TPM= 388.06 Transcript Type= protein_coding
chr2	238143135	238146227	238143135	238146227	+	transcript8082.chr2.nnic@NA	transcript8082.chr2.nnic	NA	238143135	238146227	Gene ID= novel_gene_chr2_8083 TPM= 1.93 Transcript Type= NA
chr2	238170402	238203676	238170402	238203676	-	transcript8046.chr2.nnic@ILKAP	transcript8046.chr2.nnic	protein_coding	238203499,238194805,238194275,238189863,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170402	238203676,238194870,238194331,238189972,238188231,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 2.58 Transcript Type= NA
chr2	238170402	238203661	238170402	238203661	-	transcript8048.chr2.nnic@ILKAP	transcript8048.chr2.nnic	protein_coding	238203499,238194805,238194275,238188959,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170402	238203661,238194870,238194331,238189972,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 3.21 Transcript Type= NA
chr2	238170401	238203729	238170401	238203729	-	ENST00000254654.7@ILKAP	ENST00000254654.7	protein_coding	238203499,238194805,238194275,238189853,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170401	238203729,238194870,238194331,238189972,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 59.53 Transcript Type= protein_coding
chr2	238170402	238203642	238170402	238203642	-	transcript8054.chr2.nic@ILKAP	transcript8054.chr2.nic	protein_coding	238203499,238194782,238194275,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170402	238203642,238194870,238194331,238189972,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 2.25 Transcript Type= NA
chr2	238170402	238203638	238170402	238203638	-	ENST00000463129.5@ILKAP	ENST00000463129.5	protein_coding	238203499,238194275,238189863,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170402	238203638,238194870,238189972,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 1.28 Transcript Type= retained_intron
chr2	238170403	238203683	238170403	238203683	-	ENST00000622223.4@ILKAP	ENST00000622223.4	protein_coding	238203499,238194805,238194275,238184020,238183653,238182065,238173534,238170943,238170403	238203683,238194870,238194331,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 1.28 Transcript Type= protein_coding
chr2	238199779	238203678	238199779	238203678	-	transcript8086.chr2.nnic@NA	transcript8086.chr2.nnic	NA	238199779	238203678	Gene ID= novel_gene_chr2_8087 TPM= 1.93 Transcript Type= NA
chr2	238238267	238240124	238238267	238240124	-	ENST00000272937.9@HES6	ENST00000272937.9	protein_coding	238239825,238239661,238239487,238238267	238240124,238239747,238239568,238239251	Gene ID= ENSG00000144485.10 TPM= 18.34 Transcript Type= protein_coding
chr2	238238270	238240038	238238270	238240038	-	ENST00000409160.7@HES6	ENST00000409160.7	protein_coding	238239825,238239661,238238270	238240038,238239747,238239568	Gene ID= ENSG00000144485.10 TPM= 7.72 Transcript Type= protein_coding
chr2	238244038	238288609	238244038	238288609	-	ENST00000254657.7@PER2	ENST00000254657.7	protein_coding	238288349,238277707,238277131,238275743,238273070,238271312,238268923,238268056,238265512,238262952,238262191,238261729,238260828,238259969,238258497,238258276,238256922,238255657,238252912,238251599,238250551,238249062,238244038	238288609,238277955,238277193,238275897,238273191,238271513,238268974,238268198,238265590,238263058,238262344,238261837,238260953,238260053,238258644,238258400,238257086,238255911,238253702,238251761,238250743,238249212,238246524	Gene ID= ENSG00000132326.11 TPM= 10.62 Transcript Type= protein_coding
chr2	238320441	238400822	238320441	238400822	+	ENST00000391993.7@TRAF3IP1	ENST00000391993.7	protein_coding	238320441,238325306,238325809,238328686,238328926,238332824,238333960,238347455,238348764,238349325,238352827,238353173,238356004,238397459,238398754	238320785,238325374,238325970,238328829,238329342,238332895,238334035,238347475,238348848,238349408,238352950,238353209,238356080,238397679,238400822	Gene ID= ENSG00000204104.11 TPM= 3.38 Transcript Type= protein_coding
chr2	238320508	238400900	238320508	238400900	+	transcript8102.chr2.nnic@TRAF3IP1	transcript8102.chr2.nnic	protein_coding	238320508,238325306,238325809,238328686,238328926,238347455,238348764,238349325,238352827,238353173,238356004,238397459,238398754	238320785,238325374,238325970,238328829,238329342,238347475,238348848,238349408,238352950,238353209,238356080,238397679,238400900	Gene ID= ENSG00000204104.11 TPM= 6.27 Transcript Type= NA
chr2	239048168	239400949	239048168	239400949	-	ENST00000345617.7@HDAC4	ENST00000345617.7	protein_coding	239400377,239352678,239236593,239189833,239176413,239163803,239156652,239144583,239139684,239134527,239134245,239126456,239115053,239111526,239108050,239102776,239095010,239090009,239087559,239084155,239082102,239081095,239068489,239066722,239054749,239053460,239048168	239400949,239352918,239236664,239190077,239176563,239163923,239156773,239144714,239139796,239134643,239134443,239126679,239115310,239111712,239108183,239102896,239095056,239090116,239087614,239084242,239082221,239081192,239068607,239066855,239054833,239053601,239053136	Gene ID= ENSG00000068024.16 TPM= 82.05 Transcript Type= protein_coding
chr2	239238195	239240582	239238195	239240582	-	transcript8144.chr2.nnic@NA	transcript8144.chr2.nnic	NA	239238195	239240582	Gene ID= novel_gene_chr2_8145 TPM= 1.93 Transcript Type= NA
chr2	239276050	239278335	239276050	239278335	+	transcript8136.chr2.nnic@NA	transcript8136.chr2.nnic	NA	239276050	239278335	Gene ID= novel_gene_chr2_8137 TPM= 1.93 Transcript Type= NA
chr2	239303598	239309317	239303598	239309317	-	transcript8138.chr2.nnic@NA	transcript8138.chr2.nnic	NA	239303598	239309317	Gene ID= novel_gene_chr2_8139 TPM= 10.62 Transcript Type= NA
chr2	239401732	239402342	239401732	239402342	+	transcript8146.chr2.nnic@NA	transcript8146.chr2.nnic	NA	239401732	239402342	Gene ID= novel_gene_chr2_8147 TPM= 1.93 Transcript Type= NA
chr2	239957372	240025402	239957372	240025402	-	ENST00000252711.6@NDUFA10	ENST00000252711.6	protein_coding	240025227,240022172,240021197,240018553,240014739,240011617,240007316,240005210,239990074,239957372	240025402,240022340,240021412,240018639,240014860,240011696,240007370,240005295,239990182,239961186	Gene ID= ENSG00000130414.11 TPM= 212.85 Transcript Type= protein_coding
chr2	239960741	240025345	239960741	240025345	-	ENST00000620965.4@NDUFA10	ENST00000620965.4	protein_coding	240025245,240025227,240022172,240021197,240018553,240014739,240011617,240007316,240005210,239990074,239960741	240025345,240025243,240022341,240021412,240018639,240014860,240011696,240007370,240005295,239990182,239961186	Gene ID= ENSG00000130414.11 TPM= 219.85 Transcript Type= protein_coding
chr2	239960741	240025323	239960741	240025323	-	ENST00000485344.6@NDUFA10	ENST00000485344.6	protein_coding	240025227,240022172,240021197,240018553,240011617,240007316,240005210,239990074,239960741	240025323,240022340,240021412,240018639,240014860,240007370,240005295,239990182,239961186	Gene ID= ENSG00000130414.11 TPM= 9.65 Transcript Type= retained_intron
chr2	240130826	240136303	240130826	240136303	-	ENST00000607357.1@COPS9	ENST00000607357.1	protein_coding	240136222,240133933,240130826	240136303,240134005,240131088	Gene ID= ENSG00000172428.10 TPM= 74.33 Transcript Type= protein_coding
chr2	240435671	240468078	240435671	240468078	+	ENST00000264039.6@GPC1	ENST00000264039.6	protein_coding	240435671,240459030,240462191,240463347,240464616,240464856,240465077,240465473,240466058	240436084,240459188,240462582,240463512,240464746,240464975,240465210,240465648,240468078	Gene ID= ENSG00000063660.8 TPM= 597.04 Transcript Type= protein_coding
chr2	240521938	240561091	240521938	240561091	-	ENST00000405002.5@ANKMY1	ENST00000405002.5	protein_coding	240560731,240554866,240552914,240525685,240521938	240561091,240555055,240553057,240525849,240524381	Gene ID= ENSG00000144504.15 TPM= 1.93 Transcript Type= protein_coding
chr2	240560054	240564014	240560054	240564014	+	ENST00000343217.6@DUSP28	ENST00000343217.6	protein_coding	240560054,240561330,240563674	240561077,240561519,240564014	Gene ID= ENSG00000188542.9 TPM= 9.65 Transcript Type= protein_coding
chr2	240560392	240564013	240560392	240564013	+	transcript8195.chr2.nic@DUSP28	transcript8195.chr2.nic	protein_coding	240560392,240561330,240563674	240561077,240562596,240564013	Gene ID= ENSG00000188542.9 TPM= 2.9 Transcript Type= NA
chr2	240560302	240564014	240560302	240564014	+	ENST00000405954.1@DUSP28	ENST00000405954.1	protein_coding	240560302,240561330	240561077,240564014	Gene ID= ENSG00000188542.9 TPM= 5.79 Transcript Type= protein_coding
chr2	240568425	240578727	240568425	240578727	+	transcript8205.chr2.nic@RNPEPL1	transcript8205.chr2.nic	protein_coding	240568425,240572423,240573110,240573775,240574113,240574515,240575030,240575502,240576568,240576848,240577599	240569114,240572563,240573261,240573891,240574348,240574628,240575142,240575610,240576765,240576990,240578727	Gene ID= ENSG00000142327.12 TPM= 27.35 Transcript Type= NA
chr2	240568425	240578727	240568425	240578727	+	transcript8208.chr2.nnic@RNPEPL1	transcript8208.chr2.nnic	protein_coding	240568425,240572423,240573128,240573775,240574113,240574515,240575030,240575502,240576535,240576848,240577599	240569114,240572563,240573261,240573891,240574348,240574628,240575142,240575610,240576765,240576990,240578727	Gene ID= ENSG00000142327.12 TPM= 29.76 Transcript Type= NA
chr2	240575502	240578724	240575502	240578724	+	ENST00000437406.1@RNPEPL1	ENST00000437406.1	protein_coding	240575502,240576568,240576848,240577599	240575610,240576765,240576990,240578724	Gene ID= ENSG00000142327.12 TPM= 43.44 Transcript Type= protein_coding
chr2	240586797	240599103	240586797	240599103	+	transcript8215.chr2.nic@CAPN10	transcript8215.chr2.nic	protein_coding	240586797,240589343,240590815,240591933,240593906,240594543,240595024,240595934,240596681,240597888,240598352,240598651	240587052,240589474,240591000,240592150,240594047,240594709,240595304,240596521,240596942,240598087,240598397,240599103	Gene ID= ENSG00000142330.19 TPM= 2.41 Transcript Type= NA
chr2	240586698	240599103	240586698	240599103	+	transcript8221.chr2.nic@CAPN10	transcript8221.chr2.nic	protein_coding	240586698,240589343,240590815,240591933,240593906,240594543,240595024,240597888,240598352,240598651	240587052,240589474,240591011,240592150,240594047,240594709,240596521,240598087,240598397,240599103	Gene ID= ENSG00000142330.19 TPM= 2.41 Transcript Type= NA
chr2	240586698	240599103	240586698	240599103	+	transcript8222.chr2.nic@CAPN10	transcript8222.chr2.nic	protein_coding	240586698,240589343,240590815,240591933,240593906,240594543,240595024,240597888,240598352,240598651	240587052,240589474,240591011,240592150,240594047,240594709,240596942,240598087,240598397,240599103	Gene ID= ENSG00000142330.19 TPM= 3.38 Transcript Type= NA
chr2	240586716	240599109	240586716	240599109	+	ENST00000391984.6@CAPN10	ENST00000391984.6	protein_coding	240586716,240589343,240590815,240591933,240593906,240594543,240595024,240596319,240596681,240597888,240598352,240598651	240587052,240589474,240591011,240592150,240594047,240594709,240595304,240596521,240596942,240598087,240598397,240599109	Gene ID= ENSG00000142330.19 TPM= 13.03 Transcript Type= protein_coding
chr2	240998429	241093069	240998429	241093069	+	transcript8226.chr2.nic@SNED1	transcript8226.chr2.nic	protein_coding	240998429,241030284,241033735,241034568,241036790,241037240,241040075,241040300,241048315,241048662,241049022,241049817,241051744,241052041,241052355,241053153,241062791,241063587,241064012,241064844,241065299,241067764,241068911,241069920,241071576,241071796,241081677,241082277,241087392,241088365,241091638	240999050,241030571,241033875,241034730,241036915,241037353,241040188,241040413,241048440,241048766,241049135,241049933,241051860,241052157,241052468,241053326,241062904,241063700,241064125,241064957,241065595,241067947,241069023,241070201,241071720,241071878,241081793,241082364,241087475,241088402,241093069	Gene ID= ENSG00000162804.13 TPM= 11.1 Transcript Type= NA
chr2	240998429	241045727	240998429	241045727	+	transcript8231.chr2.nnic@SNED1	transcript8231.chr2.nnic	protein_coding	240998429,241030284,241033735,241034568,241036790,241037240,241040075,241040300,241044574	240999050,241030571,241033875,241034702,241036915,241037353,241040188,241040413,241045727	Gene ID= ENSG00000162804.13 TPM= 2.41 Transcript Type= NA
chr2	241095566	241102332	241095566	241102332	-	ENST00000391980.6@MTERF4	ENST00000391980.6	protein_coding	241102253,241099396,241097243,241095566	241102332,241099894,241097427,241096438	Gene ID= ENSG00000122085.16 TPM= 41.51 Transcript Type= protein_coding
chr2	241095566	241102321	241095566	241102321	-	transcript8248.chr2.nnic@MTERF4	transcript8248.chr2.nnic	protein_coding	241102253,241095566	241102321,241096438	Gene ID= ENSG00000122085.16 TPM= 3.86 Transcript Type= NA
chr2	241150022	241183652	241150022	241183652	+	ENST00000234038.10@PPP1R7	ENST00000234038.10	protein_coding	241150022,241153476,241157807,241158484,241159213,241160332,241163285,241166337,241169781,241182647	241150547,241153604,241157862,241158549,241159343,241160494,241163401,241166441,241169867,241183652	Gene ID= ENSG00000115685.14 TPM= 1.93 Transcript Type= protein_coding
chr2	241150418	241167174	241150418	241167174	+	ENST00000404405.7@PPP1R7	ENST00000404405.7	protein_coding	241150418,241153476,241157807,241158484,241159213,241160332,241163285,241166337,241167045	241150547,241153604,241157862,241158531,241159343,241160494,241163401,241166441,241167174	Gene ID= ENSG00000115685.14 TPM= 12.55 Transcript Type= protein_coding
chr2	241150496	241167174	241150496	241167174	+	ENST00000401987.5@PPP1R7	ENST00000401987.5	protein_coding	241150496,241157807,241158484,241159213,241160332,241163285,241166337,241167045	241150547,241157862,241158549,241159343,241160494,241163401,241166441,241167174	Gene ID= ENSG00000115685.14 TPM= 2.9 Transcript Type= protein_coding
chr2	241150480	241167174	241150480	241167174	+	ENST00000406106.7@PPP1R7	ENST00000406106.7	protein_coding	241150480,241153476,241157807,241158484,241159213,241160332,241163285,241166337,241167045	241150547,241153604,241157862,241158549,241159343,241160494,241163401,241166441,241167174	Gene ID= ENSG00000115685.14 TPM= 11.58 Transcript Type= protein_coding
chr2	241229212	241315842	241229212	241315842	-	ENST00000310931.8@HDLBP	ENST00000310931.8	protein_coding	241315570,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241229212	241315842,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687	Gene ID= ENSG00000115677.16 TPM= 118.23 Transcript Type= protein_coding
chr2	241227264	241272886	241227264	241272886	-	ENST00000391975.5@HDLBP	ENST00000391975.5	protein_coding	241272761,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241227264	241272886,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687	Gene ID= ENSG00000115677.16 TPM= 84.46 Transcript Type= protein_coding
chr2	241229212	241315292	241229212	241315292	-	ENST00000391976.6@HDLBP	ENST00000391976.6	protein_coding	241315102,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241229212	241315292,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687	Gene ID= ENSG00000115677.16 TPM= 233.06 Transcript Type= protein_coding
chr2	241315887	241354027	241315887	241354027	+	transcript8295.chr2.nic@SEPT2	transcript8295.chr2.nic	protein_coding	241315887,241317499,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241317599,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 25.65 Transcript Type= NA
chr2	241315861	241354024	241315861	241354024	+	ENST00000616972.4@SEPT2	ENST00000616972.4	protein_coding	241315861,241316422,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241316555,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354024	Gene ID= ENSG00000168385.17 TPM= 2.16 Transcript Type= protein_coding
chr2	241315100	241354024	241315100	241354024	+	ENST00000391973.6@SEPT2	ENST00000391973.6	protein_coding	241315100,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315610,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354024	Gene ID= ENSG00000168385.17 TPM= 15.68 Transcript Type= protein_coding
chr2	241315861	241354027	241315861	241354027	+	ENST00000391971.6@SEPT2	ENST00000391971.6	protein_coding	241315861,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 127.01 Transcript Type= protein_coding
chr2	241315883	241354027	241315883	241354027	+	ENST00000407971.5@SEPT2	ENST00000407971.5	protein_coding	241315883,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 11.97 Transcript Type= protein_coding
chr2	241315928	241354027	241315928	241354027	+	ENST00000402092.6@SEPT2	ENST00000402092.6	protein_coding	241315928,241320203,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241320287,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 3.45 Transcript Type= protein_coding
chr2	241317537	241320840	241317537	241320840	-	transcript8319.chr2.nnic@NA	transcript8319.chr2.nnic	NA	241317537	241320840	Gene ID= novel_gene_chr2_8320 TPM= 1.93 Transcript Type= NA
chr2	241356243	241494841	241356243	241494841	+	ENST00000264042.7@FARP2	ENST00000264042.7	protein_coding	241356243,241373084,241403828,241404799,241407537,241411033,241413307,241417962,241431679,241434158,241434962,241436481,241441304,241456747,241462523,241463335,241463899,241468140,241475857,241483465,241484242,241489962,241491061,241491516,241492929,241493293,241494008	241356388,241373290,241403932,241404841,241407615,241411130,241413421,241418109,241431774,241434321,241435030,241436538,241441556,241456922,241462612,241463468,241463980,241468377,241475987,241483533,241484331,241490044,241491179,241491679,241493036,241493444,241494841	Gene ID= ENSG00000006607.13 TPM= 6.76 Transcript Type= protein_coding
chr2	241492674	241508692	241492674	241508692	-	ENST00000316586.8@STK25	ENST00000316586.8	protein_coding	241508443,241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241492674	241508692,241508135,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 23.59 Transcript Type= protein_coding
chr2	241495017	241508688	241495017	241508688	-	ENST00000403346.7@STK25	ENST00000403346.7	protein_coding	241508505,241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241495017	241508688,241508135,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 86.54 Transcript Type= protein_coding
chr2	241494707	241508695	241494707	241508695	-	ENST00000535007.5@STK25	ENST00000535007.5	protein_coding	241508443,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241494707	241508695,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 17.29 Transcript Type= protein_coding
chr2	241495019	241508362	241495019	241508362	-	ENST00000401869.5@STK25	ENST00000401869.5	protein_coding	241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241495019	241508362,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 151.75 Transcript Type= protein_coding
chr2	241495022	241508556	241495022	241508556	-	ENST00000405883.7@STK25	ENST00000405883.7	protein_coding	241508443,241508006,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241495022	241508556,241508135,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 19.07 Transcript Type= protein_coding
chr2	241505085	241508355	241505085	241508355	-	transcript8385.chr2.nnic@NA	transcript8385.chr2.nnic	NA	241505085	241508355	Gene ID= novel_gene_chr2_8386 TPM= 4.83 Transcript Type= NA
chr2	241558745	241574128	241558745	241574128	+	transcript8389.chr2.nnic@BOK	transcript8389.chr2.nnic	protein_coding	241558745,241559455,241562348,241570125,241572297,241573177	241558993,241559703,241562476,241570288,241573055,241574128	Gene ID= ENSG00000176720.5 TPM= 2.9 Transcript Type= NA
chr2	241558721	241574138	241558721	241574138	+	ENST00000318407.4@BOK	ENST00000318407.4	protein_coding	241558721,241559455,241562348,241570125,241572297	241558993,241559703,241562476,241570288,241574138	Gene ID= ENSG00000176720.5 TPM= 7.72 Transcript Type= protein_coding
chr2	241584427	241637572	241584427	241637572	-	transcript8396.chr2.nic@THAP4	transcript8396.chr2.nic	protein_coding	241636941,241632917,241606314,241602970,241601815,241584427	241637572,241634079,241606473,241603079,241601999,241584725	Gene ID= ENSG00000176946.11 TPM= 12.55 Transcript Type= NA
chr2	241584405	241617501	241584405	241617501	-	ENST00000402136.5@THAP4	ENST00000402136.5	protein_coding	241617412,241606314,241602970,241601896,241584405	241617501,241606473,241603079,241601999,241584725	Gene ID= ENSG00000176946.11 TPM= 11.58 Transcript Type= protein_coding
chr2	241637689	241673857	241637689	241673857	+	transcript8402.chr2.nic@ATG4B	transcript8402.chr2.nic	protein_coding	241637689,241651010,241651264,241653307,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191	241637724,241651111,241651335,241653369,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671405,241673857	Gene ID= ENSG00000168397.16 TPM= 5.63 Transcript Type= NA
chr2	241637612	241673857	241637612	241673857	+	ENST00000404914.7@ATG4B	ENST00000404914.7	protein_coding	241637612,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191	241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671405,241673857	Gene ID= ENSG00000168397.16 TPM= 45.53 Transcript Type= protein_coding
chr2	241637213	241673854	241637213	241673854	+	ENST00000405546.7@ATG4B	ENST00000405546.7	protein_coding	241637213,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191	241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671425,241673854	Gene ID= ENSG00000168397.16 TPM= 2.49 Transcript Type= protein_coding
chr2	241637612	241672628	241637612	241672628	+	ENST00000402096.5@ATG4B	ENST00000402096.5	protein_coding	241637612,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191	241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671441,241672628	Gene ID= ENSG00000168397.16 TPM= 2.25 Transcript Type= protein_coding
chr2	241637688	241673857	241637688	241673857	+	transcript8413.chr2.nic@ATG4B	transcript8413.chr2.nic	protein_coding	241637688,241651010,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191	241637724,241651111,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671405,241673857	Gene ID= ENSG00000168397.16 TPM= 5.63 Transcript Type= NA
chr2	241637698	241672631	241637698	241672631	+	ENST00000482507.5@ATG4B	ENST00000482507.5	protein_coding	241637698,241651010,241651264,241653307,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312	241637724,241651111,241651335,241653369,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241672631	Gene ID= ENSG00000168397.16 TPM= 4.83 Transcript Type= retained_intron
chr2	241675747	241686972	241675747	241686972	-	transcript8415.chr2.nnic@DTYMK	transcript8415.chr2.nnic	protein_coding	241686654,241685769,241682799,241681919,241678452,241675747	241686972,241685877,241682915,241682333,241678649,241676237	Gene ID= ENSG00000168393.12 TPM= 3.86 Transcript Type= NA
chr2	241675742	241686991	241675742	241686991	-	ENST00000305784.6@DTYMK	ENST00000305784.6	protein_coding	241686654,241685769,241680229,241678452,241675742	241686991,241685877,241680319,241678649,241676237	Gene ID= ENSG00000168393.12 TPM= 9.65 Transcript Type= protein_coding
chr2	241687040	241687504	241687040	241687504	+	transcript8426.chr2.nnic@NA	transcript8426.chr2.nnic	NA	241687040	241687504	Gene ID= novel_gene_chr2_8427 TPM= 1.93 Transcript Type= NA
chr2	241687063	241689798	241687063	241689798	+	transcript8428.chr2.nnic@NA	transcript8428.chr2.nnic	NA	241687063	241689798	Gene ID= novel_gene_chr2_8429 TPM= 2.9 Transcript Type= NA
chr2	241702040	241729478	241702040	241729478	+	ENST00000313552.10@ING5	ENST00000313552.10	protein_coding	241702040,241704653,241709216,241711377,241711978,241722939,241723210,241724989	241702102,241704724,241709382,241711488,241712071,241723074,241723271,241729478	Gene ID= ENSG00000168395.15 TPM= 6.76 Transcript Type= protein_coding
chr2	241734579	241768811	241734579	241768811	+	ENST00000321264.8@D2HGDH	ENST00000321264.8	protein_coding	241734579,241735133,241741033,241742435,241743622,241744709,241750151,241751246,241755849,241767710	241734695,241735516,241741090,241742574,241743815,241744877,241750294,241751388,241756014,241768811	Gene ID= ENSG00000180902.17 TPM= 71.84 Transcript Type= protein_coding
chr2	241734589	241768811	241734589	241768811	+	transcript8444.chr2.nnic@D2HGDH	transcript8444.chr2.nnic	protein_coding	241734589,241735133,241741033,241742435,241743622,241744709,241750151,241751246,241767710	241734695,241735516,241741090,241742574,241743815,241744877,241750294,241751388,241768811	Gene ID= ENSG00000180902.17 TPM= 7 Transcript Type= NA
chr2	241734602	241768809	241734602	241768809	+	ENST00000403782.5@D2HGDH	ENST00000403782.5	protein_coding	241734602,241741033,241742435,241743622,241744709,241750151,241751246,241755849,241767710	241734695,241741090,241742574,241743815,241744877,241750294,241751388,241756014,241768809	Gene ID= ENSG00000180902.17 TPM= 8.13 Transcript Type= protein_coding
chr2	241734630	241768809	241734630	241768809	+	ENST00000400769.6@D2HGDH	ENST00000400769.6	protein_coding	241734630,241735133,241741033,241742435,241743622,241744709,241755849,241767710	241734695,241735516,241741090,241742574,241743815,241744877,241756014,241768809	Gene ID= ENSG00000180902.17 TPM= 7.65 Transcript Type= nonsense_mediated_decay
chr2	241808315	241810637	241808315	241810637	-	transcript8456.chr2.nnic@AC131097.3	transcript8456.chr2.nnic	antisense_RNA	241810600,241808315	241810637,241809368	Gene ID= ENSG00000224272.2 TPM= 4.83 Transcript Type= NA
chr2	241809108	241817408	241809108	241817408	+	transcript8451.chr2.nnic@NEU4	transcript8451.chr2.nnic	protein_coding	241809108,241813333,241814482,241814892,241816051	241809274,241813513,241814685,241815147,241817408	Gene ID= ENSG00000204099.11 TPM= 10.14 Transcript Type= NA
chr2	241809065	241817408	241809065	241817408	+	transcript8453.chr2.nnic@NEU4	transcript8453.chr2.nnic	protein_coding	241809065,241814482,241814849,241816051	241809274,241814685,241815147,241817408	Gene ID= ENSG00000204099.11 TPM= 8.21 Transcript Type= NA
chr2	241893985	241900448	241893985	241900448	-	ENST00000404031.5@AC131097.2	ENST00000404031.5	protein_coding	241900358,241897186,241893985	241900448,241897334,241894339	Gene ID= ENSG00000216921.7 TPM= 2.9 Transcript Type= protein_coding
chr3	3126916	3149023	3126916	3149023	+	ENST00000251607.10@TRNT1	ENST00000251607.10	protein_coding	3126916,3129014,3137260,3140510,3144584,3146430,3147450,3147906	3126990,3129188,3137453,3140648,3144710,3146623,3147703,3149023	Gene ID= ENSG00000072756.16 TPM= 8.69 Transcript Type= protein_coding
chr3	3126934	3149023	3126934	3149023	+	transcript25.chr3.nnic@TRNT1	transcript25.chr3.nnic	protein_coding	3126934,3129014,3137260,3140510,3144584,3147450,3147906	3126990,3129188,3137453,3140648,3144710,3147703,3149023	Gene ID= ENSG00000072756.16 TPM= 1.93 Transcript Type= NA
chr3	3150519	3179701	3150519	3179701	-	transcript11.chr3.nic@CRBN	transcript11.chr3.nic	protein_coding	3179621,3174059,3172776,3167634,3156219,3154747,3153960,3153424,3152456,3150519	3179701,3174261,3172925,3167793,3156281,3154831,3154075,3153488,3152587,3151045	Gene ID= ENSG00000113851.14 TPM= 7.72 Transcript Type= NA
chr3	3144628	3179727	3144628	3179727	-	ENST00000639284.1@CRBN	ENST00000639284.1	protein_coding	3179621,3175163,3174059,3172776,3167634,3156219,3154747,3153960,3153424,3152456,3150883,3144628	3179727,3175269,3174261,3172925,3167793,3156281,3154831,3154075,3153488,3152587,3151045,3145499	Gene ID= ENSG00000113851.14 TPM= 3.38 Transcript Type= protein_coding
chr3	3150011	3179710	3150011	3179710	-	ENST00000231948.8@CRBN	ENST00000231948.8	protein_coding	3179621,3175163,3174059,3172776,3167634,3156219,3154747,3153960,3153424,3152456,3150011	3179710,3175269,3174261,3172925,3167793,3156281,3154831,3154075,3153488,3152587,3151045	Gene ID= ENSG00000113851.14 TPM= 13.03 Transcript Type= protein_coding
chr3	3172176	3179701	3172176	3179701	-	ENST00000498700.5@CRBN	ENST00000498700.5	protein_coding	3179621,3175163,3174059,3172776,3172176	3179701,3175269,3174261,3172925,3172646	Gene ID= ENSG00000113851.14 TPM= 1.93 Transcript Type= retained_intron
chr3	4303304	4317567	4303304	4317567	+	ENST00000358065.4@SETMAR	ENST00000358065.4	protein_coding	4303304,4312898,4316212	4303526,4313761,4317567	Gene ID= ENSG00000170364.12 TPM= 1.93 Transcript Type= protein_coding
chr3	4361146	4467281	4361146	4467281	-	ENST00000272902.9@SUMF1	ENST00000272902.9	protein_coding	4466976,4452876,4449266,4420064,4418010,4417128,4410865,4376330,4361146	4467281,4453049,4449340,4420146,4418132,4417242,4410978,4376389,4362254	Gene ID= ENSG00000144455.13 TPM= 7.72 Transcript Type= protein_coding
chr3	4979116	4985323	4979116	4985323	+	ENST00000256495.3@BHLHE40	ENST00000256495.3	protein_coding	4979116,4979962,4980301,4981392,4982836	4979798,4980031,4980408,4981515,4985323	Gene ID= ENSG00000134107.4 TPM= 17.38 Transcript Type= protein_coding
chr3	5122292	5179646	5122292	5179646	+	ENST00000455168.5@ARL8B	ENST00000455168.5	protein_coding	5122292,5170503,5172150,5172647,5174017,5174344,5178664	5122588,5170556,5172223,5172740,5174084,5174414,5179646	Gene ID= ENSG00000134108.12 TPM= 17.38 Transcript Type= nonsense_mediated_decay
chr3	5122245	5180912	5122245	5180912	+	ENST00000611208.4@ARL8B	ENST00000611208.4	protein_coding	5122245,5170503,5172150,5172647,5174017,5174344,5178664	5122588,5170583,5172223,5172740,5174084,5174414,5180912	Gene ID= ENSG00000134108.12 TPM= 292.49 Transcript Type= protein_coding
chr3	5180753	5184427	5180753	5184427	+	transcript74.chr3.nnic@NA	transcript74.chr3.nnic	NA	5180753	5184427	Gene ID= novel_gene_chr3_75 TPM= 5.79 Transcript Type= NA
chr3	5187673	5219957	5187673	5219957	+	ENST00000256497.8@EDEM1	ENST00000256497.8	protein_coding	5187673,5195209,5199592,5201753,5202966,5205067,5207153,5208093,5210175,5211120,5213319,5215829	5188314,5195281,5199695,5201924,5203149,5205241,5207273,5208263,5210248,5211216,5213522,5219957	Gene ID= ENSG00000134109.10 TPM= 8.69 Transcript Type= protein_coding
chr3	5220535	5222699	5220535	5222699	-	transcript80.chr3.nnic@NA	transcript80.chr3.nnic	NA	5220535	5222699	Gene ID= novel_gene_chr3_81 TPM= 1.93 Transcript Type= NA
chr3	8501803	8568125	8501803	8568125	+	transcript84.chr3.nic@LMCD1	transcript84.chr3.nic	protein_coding	8501803,8514925,8532737,8537185,8548568,8565432,8567440	8501980,8514995,8532825,8537440,8548903,8565647,8568125	Gene ID= ENSG00000071282.11 TPM= 152.52 Transcript Type= NA
chr3	8733800	8746765	8733800	8746765	+	ENST00000343849.2@CAV3	ENST00000343849.2	protein_coding	8733800,8745526	8733990,8746765	Gene ID= ENSG00000182533.6 TPM= 129.35 Transcript Type= protein_coding
chr3	8740300	8742372	8740300	8742372	+	transcript102.chr3.nnic@NA	transcript102.chr3.nnic	NA	8740300	8742372	Gene ID= novel_gene_chr3_103 TPM= 1.93 Transcript Type= NA
chr3	8879874	8963492	8879874	8963492	-	transcript104.chr3.nic@RAD18	transcript104.chr3.nic	protein_coding	8963335,8958920,8947243,8941467,8939554,8935871,8913644,8912312,8902380,8898894,8890389,8879874	8963492,8959001,8947290,8941804,8939653,8936055,8913720,8912372,8902520,8899047,8890451,8881459	Gene ID= ENSG00000070950.9 TPM= 1.93 Transcript Type= NA
chr3	9389147	9397440	9389147	9397440	-	transcript160.chr3.nic@THUMPD3-AS1	transcript160.chr3.nic	antisense_RNA	9397424,9391427,9389147	9397440,9391826,9390497	Gene ID= ENSG00000206573.8 TPM= 1.93 Transcript Type= NA
chr3	9389902	9397494	9389902	9397494	-	transcript163.chr3.nnic@THUMPD3-AS1	transcript163.chr3.nnic	antisense_RNA	9397424,9391489,9389902	9397494,9391826,9390497	Gene ID= ENSG00000206573.8 TPM= 1.93 Transcript Type= NA
chr3	9362842	9385702	9362842	9385702	+	ENST00000452837.6@THUMPD3	ENST00000452837.6	protein_coding	9362842,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363127,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9385702	Gene ID= ENSG00000134077.15 TPM= 12.55 Transcript Type= protein_coding
chr3	9363052	9386791	9363052	9386791	+	ENST00000345094.7@THUMPD3	ENST00000345094.7	protein_coding	9363052,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363332,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9386791	Gene ID= ENSG00000134077.15 TPM= 1.93 Transcript Type= protein_coding
chr3	9363054	9385702	9363054	9385702	+	transcript136.chr3.nic@THUMPD3	transcript136.chr3.nic	protein_coding	9363054,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363525,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9385702	Gene ID= ENSG00000134077.15 TPM= 6.76 Transcript Type= NA
chr3	9363054	9384870	9363054	9384870	+	transcript137.chr3.nnic@THUMPD3	transcript137.chr3.nnic	protein_coding	9363054,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363767,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9384870	Gene ID= ENSG00000134077.15 TPM= 2.9 Transcript Type= NA
chr3	9363098	9384870	9363098	9384870	+	ENST00000515662.6@THUMPD3	ENST00000515662.6	protein_coding	9363098,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363728,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9384870	Gene ID= ENSG00000134077.15 TPM= 3.86 Transcript Type= protein_coding
chr3	9397609	9445301	9397609	9445301	+	transcript115.chr3.nic@SETD5	transcript115.chr3.nic	protein_coding	9397609,9424467,9428823,9433845,9434334,9434824,9435728,9440456,9441593,9442128,9443308,9445048	9397977,9424526,9429009,9433950,9434485,9434882,9435906,9440698,9441741,9442245,9443417,9445301	Gene ID= ENSG00000168137.15 TPM= 1.93 Transcript Type= NA
chr3	9649462	9702392	9649462	9702392	+	ENST00000296003.8@MTMR14	ENST00000296003.8	protein_coding	9649462,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9697711,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9697866,9702392	Gene ID= ENSG00000163719.19 TPM= 147.03 Transcript Type= protein_coding
chr3	9649433	9702393	9649433	9702393	+	ENST00000353332.9@MTMR14	ENST00000353332.9	protein_coding	9649433,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9702393	Gene ID= ENSG00000163719.19 TPM= 52.2 Transcript Type= protein_coding
chr3	9649444	9702392	9649444	9702392	+	transcript177.chr3.nic@MTMR14	transcript177.chr3.nic	protein_coding	9649444,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9697711,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9697866,9702392	Gene ID= ENSG00000163719.19 TPM= 12.52 Transcript Type= NA
chr3	9649444	9702392	9649444	9702392	+	transcript178.chr3.nnic@MTMR14	transcript178.chr3.nnic	protein_coding	9649444,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9697711,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9697866,9702392	Gene ID= ENSG00000163719.19 TPM= 7.83 Transcript Type= NA
chr3	9649512	9702389	9649512	9702389	+	ENST00000351233.9@MTMR14	ENST00000351233.9	protein_coding	9649512,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9702389	Gene ID= ENSG00000163719.19 TPM= 22.75 Transcript Type= protein_coding
chr3	9731745	9748015	9731745	9748015	+	ENST00000424362.5@BRPF1	ENST00000424362.5	protein_coding	9731745,9734131,9738999,9740779,9741308,9742025,9742944,9743581,9744224,9745008,9745573,9745812,9746300,9747166	9732138,9734739,9739958,9740941,9741439,9742153,9743253,9743901,9744508,9745155,9745709,9745930,9746454,9748015	Gene ID= ENSG00000156983.15 TPM= 7.72 Transcript Type= protein_coding
chr3	9731745	9748018	9731745	9748018	+	ENST00000383829.6@BRPF1	ENST00000383829.6	protein_coding	9731745,9734131,9738999,9740779,9741308,9742025,9742944,9743578,9744224,9745008,9745573,9745812,9746300,9747166	9732138,9734739,9739958,9740941,9741439,9742171,9743253,9743901,9744508,9745155,9745709,9745930,9746454,9748018	Gene ID= ENSG00000156983.15 TPM= 5.31 Transcript Type= protein_coding
chr3	9731729	9747873	9731729	9747873	+	ENST00000433861.6@BRPF1	ENST00000433861.6	protein_coding	9731729,9734131,9738999,9740779,9741308,9742025,9742944,9743578,9745008,9745573,9745812,9746300,9747166	9732138,9734739,9739958,9740941,9741439,9742153,9743253,9743901,9745155,9745709,9745930,9746454,9747873	Gene ID= ENSG00000156983.15 TPM= 1.45 Transcript Type= protein_coding
chr3	9732002	9747997	9732002	9747997	+	transcript194.chr3.nnic@BRPF1	transcript194.chr3.nnic	protein_coding	9732002,9734131,9738999,9747901	9732138,9734739,9739315,9747997	Gene ID= ENSG00000156983.15 TPM= 1.93 Transcript Type= NA
chr3	9749944	9757513	9749944	9757513	+	ENST00000344629.11@OGG1	ENST00000344629.11	protein_coding	9749944,9750945,9751770,9754704,9756471,9756767,9757061	9750423,9751192,9751949,9754885,9756621,9756816,9757513	Gene ID= ENSG00000114026.21 TPM= 1.93 Transcript Type= protein_coding
chr3	9749944	9757407	9749944	9757407	+	ENST00000302003.11@OGG1	ENST00000302003.11	protein_coding	9749944,9750945,9751770,9754704,9756471,9756767,9757044	9750423,9751192,9751949,9754885,9756621,9756816,9757407	Gene ID= ENSG00000114026.21 TPM= 2.9 Transcript Type= protein_coding
chr3	9757342	9769977	9757342	9769977	-	ENST00000256460.7@CAMK1	ENST00000256460.7	protein_coding	9769832,9767667,9765759,9763139,9762914,9761631,9761461,9760656,9759672,9759488,9757729,9757342	9769977,9767781,9765890,9763213,9763052,9761757,9761536,9760768,9759750,9759575,9757846,9757621	Gene ID= ENSG00000134072.10 TPM= 11.58 Transcript Type= protein_coding
chr3	9779967	9792743	9779967	9792743	-	transcript207.chr3.nnic@TADA3	transcript207.chr3.nnic	protein_coding	9792444,9792216,9791260,9789713,9789509,9787199,9787006,9785316,9784028,9779967	9792743,9792376,9791493,9789963,9789614,9787340,9787109,9785425,9784213,9780549	Gene ID= ENSG00000171148.13 TPM= 4.83 Transcript Type= NA
chr3	9779860	9792747	9779860	9792747	-	ENST00000301964.6@TADA3	ENST00000301964.6	protein_coding	9792216,9791260,9789713,9789509,9787199,9787006,9785316,9784028,9779860	9792747,9791493,9789963,9789614,9787340,9787109,9785425,9784213,9780549	Gene ID= ENSG00000171148.13 TPM= 2.9 Transcript Type= protein_coding
chr3	9779967	9792679	9779967	9792679	-	transcript219.chr3.nnic@TADA3	transcript219.chr3.nnic	protein_coding	9792216,9791260,9789713,9789509,9787199,9787006,9779967	9792679,9791493,9789963,9789614,9787340,9787109,9780549	Gene ID= ENSG00000171148.13 TPM= 1.93 Transcript Type= NA
chr3	9792496	9807098	9792496	9807098	+	transcript221.chr3.nnic@ARPC4	transcript221.chr3.nnic	protein_coding	9792496,9797659,9800185,9801661,9803843,9806210	9792560,9797777,9800296,9801756,9804013,9807098	Gene ID= ENSG00000241553.12 TPM= 49.23 Transcript Type= NA
chr3	9837849	9844016	9837849	9844016	-	ENST00000383820.9@RPUSD3	ENST00000383820.9	protein_coding	9843890,9843465,9842199,9841983,9840698,9840532,9840184,9839032,9837849	9844016,9843601,9842243,9842082,9840805,9840616,9840307,9839171,9838207	Gene ID= ENSG00000156990.14 TPM= 83.5 Transcript Type= protein_coding
chr3	9837849	9844014	9837849	9844014	-	ENST00000433535.6@RPUSD3	ENST00000433535.6	protein_coding	9843890,9843465,9841983,9840698,9840532,9840184,9839032,9837849	9844014,9843601,9842082,9840805,9840616,9840307,9839171,9838207	Gene ID= ENSG00000156990.14 TPM= 2.41 Transcript Type= protein_coding
chr3	9841257	9844059	9841257	9844059	-	ENST00000433972.1@RPUSD3	ENST00000433972.1	protein_coding	9843890,9843465,9842199,9841257	9844059,9843601,9842243,9842082	Gene ID= ENSG00000156990.14 TPM= 16.41 Transcript Type= protein_coding
chr3	9866714	9880254	9866714	9880254	-	transcript270.chr3.nic@CIDEC	transcript270.chr3.nic	protein_coding	9880224,9878434,9877066,9870164,9869882,9866714	9880254,9878511,9877219,9870322,9870069,9867296	Gene ID= ENSG00000187288.10 TPM= 1.93 Transcript Type= NA
chr3	9890554	9894349	9890554	9894349	+	ENST00000307768.4@JAGN1	ENST00000307768.4	protein_coding	9890554,9892915	9890811,9894349	Gene ID= ENSG00000171135.13 TPM= 65.64 Transcript Type= protein_coding
chr3	9917121	9933616	9917121	9933616	+	transcript235.chr3.nic@IL17RC	transcript235.chr3.nic	protein_coding	9917121,9917713,9917923,9918335,9918500,9920491,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932953	9917420,9917734,9918075,9918409,9918609,9920602,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9933616	Gene ID= ENSG00000163702.18 TPM= 8.69 Transcript Type= NA
chr3	9917048	9933617	9917048	9933617	+	transcript240.chr3.nic@IL17RC	transcript240.chr3.nic	protein_coding	9917048,9917713,9917923,9918500,9920491,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932820,9932953	9917420,9917734,9918075,9918609,9920602,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9932858,9933617	Gene ID= ENSG00000163702.18 TPM= 6.76 Transcript Type= NA
chr3	9931491	9933698	9931491	9933698	-	transcript293.chr3.nnic@NA	transcript293.chr3.nnic	NA	9931491	9933698	Gene ID= novel_gene_chr3_294 TPM= 8.69 Transcript Type= NA
chr3	9933855	9945014	9933855	9945014	+	transcript248.chr3.nic@CRELD1	transcript248.chr3.nic	protein_coding	9933855,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365	9933920,9934612,9934917,9937672,9938106,9941016,9941206,9942896,9943172,9943515,9945014	Gene ID= ENSG00000163703.17 TPM= 1.93 Transcript Type= NA
chr3	9933840	9945413	9933840	9945413	+	ENST00000383811.7@CRELD1	ENST00000383811.7	protein_coding	9933840,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365	9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9945413	Gene ID= ENSG00000163703.17 TPM= 8.69 Transcript Type= protein_coding
chr3	9933822	9944994	9933822	9944994	+	ENST00000397170.7@CRELD1	ENST00000397170.7	protein_coding	9933822,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365	9933852,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944994	Gene ID= ENSG00000163703.17 TPM= 14.48 Transcript Type= protein_coding
chr3	9933845	9944999	9933845	9944999	+	ENST00000452070.5@CRELD1	ENST00000452070.5	protein_coding	9933845,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365	9933920,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944999	Gene ID= ENSG00000163703.17 TPM= 39.58 Transcript Type= protein_coding
chr3	9947371	9954790	9947371	9954790	+	transcript276.chr3.nnic@PRRT3-AS1	transcript276.chr3.nnic	antisense_RNA	9947371,9948067,9948355,9954496	9947604,9948180,9948469,9954790	Gene ID= ENSG00000230082.1 TPM= 4.83 Transcript Type= NA
chr3	9947404	9954787	9947404	9954787	+	ENST00000431558.1@PRRT3-AS1	ENST00000431558.1	antisense_RNA	9947404,9948067,9948355,9954604	9947604,9948180,9948469,9954787	Gene ID= ENSG00000230082.1 TPM= 9.65 Transcript Type= antisense_RNA
chr3	9962682	9977189	9962682	9977189	-	transcript271.chr3.nic@EMC3	transcript271.chr3.nic	protein_coding	9976957,9974384,9973628,9970582,9969719,9962682	9977189,9974488,9973709,9970661,9969801,9964197	Gene ID= ENSG00000125037.12 TPM= 36.92 Transcript Type= NA
chr3	10014238	10026357	10014238	10026357	-	ENST00000432401.5@CIDECP	ENST00000432401.5	transcribed_unprocessed_pseudogene	10026041,10023560,10014238	10026357,10023747,10015526	Gene ID= ENSG00000186162.10 TPM= 2.9 Transcript Type= processed_transcript
chr3	10017497	10026365	10017497	10026365	-	ENST00000424691.1@CIDECP	ENST00000424691.1	transcribed_unprocessed_pseudogene	10026041,10023560,10017497	10026365,10023747,10018071	Gene ID= ENSG00000186162.10 TPM= 27.03 Transcript Type= processed_transcript
chr3	10115675	10127190	10115675	10127190	+	transcript296.chr3.nnic@BRK1	transcript296.chr3.nnic	protein_coding	10115675,10118906,10125626,10126269	10115819,10118970,10125708,10127190	Gene ID= ENSG00000254999.3 TPM= 3.86 Transcript Type= NA
chr3	10115592	10127190	10115592	10127190	+	ENST00000530758.1@BRK1	ENST00000530758.1	protein_coding	10115592,10125626,10126269	10115819,10125708,10127190	Gene ID= ENSG00000254999.3 TPM= 105.22 Transcript Type= protein_coding
chr3	10141008	10152220	10141008	10152220	+	ENST00000256474.2@VHL	ENST00000256474.2	protein_coding	10141008,10146514,10149787	10142187,10146636,10152220	Gene ID= ENSG00000134086.7 TPM= 33.79 Transcript Type= protein_coding
chr3	10141788	10152082	10141788	10152082	+	ENST00000345392.2@VHL	ENST00000345392.2	protein_coding	10141788,10149787	10142187,10152082	Gene ID= ENSG00000134086.7 TPM= 3.86 Transcript Type= protein_coding
chr3	10164865	10243743	10164865	10243743	+	ENST00000256458.4@IRAK2	ENST00000256458.4	protein_coding	10164865,10177838,10200369,10209589,10213207,10213484,10216934,10219680,10222636,10226371,10234459,10238748,10242116	10165048,10178020,10200515,10209692,10213401,10213548,10217048,10219789,10222831,10226433,10234659,10239039,10243743	Gene ID= ENSG00000134070.4 TPM= 26.06 Transcript Type= protein_coding
chr3	10164874	10243574	10164874	10243574	+	transcript306.chr3.nnic@IRAK2	transcript306.chr3.nnic	protein_coding	10164874,10177838,10209589,10213207,10213484,10216934,10219680,10222636,10226371,10234459,10238748,10242116	10165048,10178020,10209692,10213401,10213548,10217048,10219789,10222831,10226433,10234659,10239039,10243574	Gene ID= ENSG00000134070.4 TPM= 1.93 Transcript Type= NA
chr3	10300931	10321072	10300931	10321072	-	transcript317.chr3.nic@SEC13	transcript317.chr3.nic	protein_coding	10320509,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931	10321072,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374	Gene ID= ENSG00000157020.17 TPM= 15.38 Transcript Type= NA
chr3	10300931	10321178	10300931	10321178	-	ENST00000350697.7@SEC13	ENST00000350697.7	protein_coding	10321050,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931	10321178,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374	Gene ID= ENSG00000157020.17 TPM= 180.45 Transcript Type= protein_coding
chr3	10300950	10321123	10300950	10321123	-	transcript325.chr3.nic@SEC13	transcript325.chr3.nic	protein_coding	10321050,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300950	10321123,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301147	Gene ID= ENSG00000157020.17 TPM= 30.89 Transcript Type= NA
chr3	10300931	10321082	10300931	10321082	-	ENST00000337354.8@SEC13	ENST00000337354.8	protein_coding	10321050,10319139,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931	10321082,10319172,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374	Gene ID= ENSG00000157020.17 TPM= 8.62 Transcript Type= protein_coding
chr3	10376233	10470977	10376233	10470977	-	transcript329.chr3.nnic@ATP2B2	transcript329.chr3.nnic	protein_coding	10470924,10449345,10410618,10402091,10400953,10388277,10386480,10385268,10379243,10378252,10376233	10470977,10449862,10410815,10402348,10401078,10388402,10386512,10385327,10379284,10378410,10378108	Gene ID= ENSG00000157087.17 TPM= 1.93 Transcript Type= NA
chr3	11272399	11284230	11272399	11284230	+	transcript341.chr3.nic@ATG7	transcript341.chr3.nic	protein_coding	11272399,11280994,11282193	11272430,11281102,11284230	Gene ID= ENSG00000197548.12 TPM= 1.93 Transcript Type= NA
chr3	11468148	11555083	11468148	11555083	+	transcript344.chr3.nnic@ATG7	transcript344.chr3.nnic	protein_coding	11468148,11554811	11468528,11555083	Gene ID= ENSG00000197548.12 TPM= 1.93 Transcript Type= NA
chr3	11468148	11469491	11468148	11469491	+	transcript345.chr3.nnic@NA	transcript345.chr3.nnic	NA	11468148	11469491	Gene ID= novel_gene_chr3_346 TPM= 2.9 Transcript Type= NA
chr3	11558476	11643924	11558476	11643924	-	ENST00000430365.6@VGLL4	ENST00000430365.6	protein_coding	11643437,11601833,11564797,11559332,11558476	11643924,11602022,11565019,11559455,11558827	Gene ID= ENSG00000144560.14 TPM= 1.93 Transcript Type= protein_coding
chr3	12153051	12159351	12153051	12159351	-	ENST00000287814.4@TIMP4	ENST00000287814.4	protein_coding	12158702,12157385,12156820,12154327,12153051	12159351,12157482,12156934,12154451,12153712	Gene ID= ENSG00000157150.4 TPM= 49.23 Transcript Type= protein_coding
chr3	12287901	12434311	12287901	12434311	+	ENST00000397015.6@PPARG	ENST00000397015.6	protein_coding	12287901,12379704,12381322,12392614,12405882,12416704,12433898	12288020,12379931,12381491,12392752,12406081,12417154,12434311	Gene ID= ENSG00000132170.19 TPM= 1.93 Transcript Type= protein_coding
chr3	12287860	12434344	12287860	12434344	+	ENST00000309576.10@PPARG	ENST00000309576.10	protein_coding	12287860,12312380,12379704,12381322,12392614,12405882,12416704,12433898	12288020,12312453,12379931,12381491,12392752,12406081,12417154,12434344	Gene ID= ENSG00000132170.19 TPM= 7.72 Transcript Type= protein_coding
chr3	12484478	12533317	12484478	12533317	+	transcript369.chr3.nic@TSEN2	transcript369.chr3.nic	protein_coding	12484478,12489784,12492136,12496518,12503262,12505154,12516611,12519059,12528888,12529762,12531570,12532662	12484517,12489989,12492217,12496554,12503784,12505231,12516661,12519197,12528924,12529873,12531659,12533317	Gene ID= ENSG00000154743.17 TPM= 5.31 Transcript Type= NA
chr3	12484511	12533317	12484511	12533317	+	ENST00000284995.10@TSEN2	ENST00000284995.10	protein_coding	12484511,12489784,12492136,12496518,12503262,12505154,12516611,12519059,12528888,12529762,12531570,12532662	12484880,12489989,12492217,12496554,12503784,12505231,12516661,12519197,12528924,12529873,12531659,12533317	Gene ID= ENSG00000154743.17 TPM= 2.41 Transcript Type= protein_coding
chr3	12484533	12539620	12484533	12539620	+	transcript372.chr3.nic@TSEN2	transcript372.chr3.nic	protein_coding	12484533,12489784,12492136,12496518,12503262,12505154,12516611,12519059,12528888,12529762,12531570,12539161	12484880,12489989,12492217,12496554,12503784,12505231,12516661,12519197,12528924,12529873,12531659,12539620	Gene ID= ENSG00000154743.17 TPM= 3.86 Transcript Type= NA
chr3	12557078	12583713	12557078	12583713	+	transcript408.chr3.nnic@MKRN2	transcript408.chr3.nnic	protein_coding	12557078,12562838,12568875,12570071,12572069,12574792,12576631,12581808,12582116	12557176,12562894,12569003,12570252,12572373,12575006,12576741,12581952,12583713	Gene ID= ENSG00000075975.15 TPM= 1.93 Transcript Type= NA
chr3	12557014	12583713	12557014	12583713	+	ENST00000170447.11@MKRN2	ENST00000170447.11	protein_coding	12557014,12568875,12570071,12572069,12574792,12576631,12581808,12582116	12557176,12569003,12570252,12572373,12575006,12576741,12581952,12583713	Gene ID= ENSG00000075975.15 TPM= 24.13 Transcript Type= protein_coding
chr3	12583601	12664226	12583601	12664226	-	ENST00000251849.8@RAF1	ENST00000251849.8	protein_coding	12663813,12618515,12611950,12609233,12608766,12606201,12604136,12600388,12600152,12599691,12591708,12590798,12587591,12585681,12585122,12584847,12583601	12664226,12618747,12612062,12609335,12608923,12606299,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585799,12585253,12584981,12584657	Gene ID= ENSG00000132155.11 TPM= 142.66 Transcript Type= protein_coding
chr3	12583601	12663468	12583601	12663468	-	transcript387.chr3.nnic@RAF1	transcript387.chr3.nnic	protein_coding	12663369,12618515,12611950,12609233,12608766,12606201,12604136,12600388,12600152,12599691,12591708,12590798,12587591,12585681,12585122,12584847,12583601	12663468,12618747,12612062,12609335,12608923,12606299,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585799,12585253,12584981,12584657	Gene ID= ENSG00000132155.11 TPM= 12.99 Transcript Type= NA
chr3	12583601	12664215	12583601	12664215	-	transcript398.chr3.nic@RAF1	transcript398.chr3.nic	protein_coding	12663813,12618515,12611950,12609233,12608766,12604136,12600388,12600152,12599691,12591708,12590798,12587591,12585681,12585122,12584847,12583601	12664215,12618747,12612062,12609335,12608923,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585799,12585253,12584981,12584657	Gene ID= ENSG00000132155.11 TPM= 23.21 Transcript Type= NA
chr3	12796680	12834803	12796680	12834803	+	ENST00000456430.6@CAND2	ENST00000456430.6	protein_coding	12796680,12803488,12807306,12808210,12810059,12812990,12813246,12815141,12815867,12816374,12820086,12825470,12827440,12831465,12833755	12796788,12803631,12807460,12808333,12810324,12813095,12813388,12815433,12816008,12817876,12820181,12825639,12827604,12831572,12834803	Gene ID= ENSG00000144712.11 TPM= 307.45 Transcript Type= protein_coding
chr3	12834485	12841588	12834485	12841588	-	ENST00000429711.6@RPL32	ENST00000429711.6	protein_coding	12841494,12840142,12839349,12834485	12841588,12840242,12839530,12836223	Gene ID= ENSG00000144713.12 TPM= 4.83 Transcript Type= protein_coding
chr3	12834946	12841582	12834946	12841582	-	ENST00000396957.5@RPL32	ENST00000396957.5	protein_coding	12841494,12840142,12839349,12834946	12841582,12840341,12839530,12836223	Gene ID= ENSG00000144713.12 TPM= 7.72 Transcript Type= protein_coding
chr3	12836050	12841545	12836050	12841545	-	ENST00000435983.5@RPL32	ENST00000435983.5	protein_coding	12841494,12840142,12839349,12836050	12841545,12840353,12839530,12836223	Gene ID= ENSG00000144713.12 TPM= 7.72 Transcript Type= protein_coding
chr3	12897220	12967668	12897220	12967668	-	ENST00000273221.8@IQSEC1	ENST00000273221.8	protein_coding	12967387,12941571,12935448,12924581,12922120,12920430,12915594,12915104,12913428,12911629,12909273,12908349,12902773,12897220	12967668,12941865,12936697,12924742,12922242,12920596,12915733,12915133,12913553,12911728,12909434,12908525,12902822,12899434	Gene ID= ENSG00000144711.13 TPM= 13.51 Transcript Type= protein_coding
chr3	12898702	12901189	12898702	12901189	-	transcript431.chr3.nnic@NA	transcript431.chr3.nnic	NA	12898702	12901189	Gene ID= novel_gene_chr3_432 TPM= 2.9 Transcript Type= NA
chr3	12994106	12996831	12994106	12996831	+	transcript427.chr3.nnic@NA	transcript427.chr3.nnic	NA	12994106	12996831	Gene ID= novel_gene_chr3_428 TPM= 1.93 Transcript Type= NA
chr3	13413898	13420294	13413898	13420294	-	transcript434.chr3.nnic@NUP210	transcript434.chr3.nnic	protein_coding	13420060,13413898	13420294,13414112	Gene ID= ENSG00000132182.11 TPM= 23.17 Transcript Type= NA
chr3	13480165	13506416	13480165	13506416	+	ENST00000295757.7@HDAC11	ENST00000295757.7	protein_coding	13480165,13481246,13483464,13496736,13498513,13500713,13501871,13502884,13504094,13504468	13480349,13481394,13483564,13496852,13498555,13500789,13501933,13502980,13504272,13506416	Gene ID= ENSG00000163517.14 TPM= 80.12 Transcript Type= protein_coding
chr3	13480293	13506416	13480293	13506416	+	transcript442.chr3.nic@HDAC11	transcript442.chr3.nic	protein_coding	13480293,13481246,13483464,13496736,13498513,13500713,13501871,13502884,13504094,13504468	13480446,13481394,13483564,13496852,13498555,13500789,13501933,13502980,13504272,13506416	Gene ID= ENSG00000163517.14 TPM= 29.92 Transcript Type= NA
chr3	13480307	13506416	13480307	13506416	+	transcript444.chr3.nnic@HDAC11	transcript444.chr3.nnic	protein_coding	13480307,13481246,13483464,13496736,13498513,13504094,13504468	13480349,13481394,13483564,13496852,13498555,13504272,13506416	Gene ID= ENSG00000163517.14 TPM= 5.79 Transcript Type= NA
chr3	13549131	13638422	13549131	13638422	+	ENST00000404922.7@FBLN2	ENST00000404922.7	protein_coding	13549131,13570315,13608062,13609513,13613984,13618076,13618904,13619730,13621775,13626445,13627832,13628905,13629164,13629820,13630699,13631329,13636445,13637562	13549208,13571661,13608173,13609642,13614164,13618285,13619017,13619831,13621915,13626579,13627969,13629048,13629292,13629945,13630815,13631457,13636568,13638422	Gene ID= ENSG00000163520.13 TPM= 63.71 Transcript Type= protein_coding
chr3	13549181	13638422	13549181	13638422	+	ENST00000295760.11@FBLN2	ENST00000295760.11	protein_coding	13549181,13570315,13608062,13609513,13613984,13618076,13618904,13619730,13626445,13627832,13628905,13629164,13629820,13630699,13631329,13636445,13637562	13549208,13571661,13608173,13609642,13614164,13618285,13619017,13619831,13626579,13627969,13629048,13629292,13629945,13630815,13631457,13636568,13638422	Gene ID= ENSG00000163520.13 TPM= 27.99 Transcript Type= protein_coding
chr3	14112077	14124870	14112077	14124870	-	ENST00000295767.9@CHCHD4	ENST00000295767.9	protein_coding	14124655,14121917,14116426,14112077	14124870,14122086,14116524,14113194	Gene ID= ENSG00000163528.12 TPM= 25.1 Transcript Type= protein_coding
chr3	14112077	14124872	14112077	14124872	-	transcript475.chr3.nnic@CHCHD4	transcript475.chr3.nnic	protein_coding	14124655,14122011,14116426,14112077	14124872,14122086,14116524,14113194	Gene ID= ENSG00000163528.12 TPM= 1.93 Transcript Type= NA
chr3	14112093	14124858	14112093	14124858	-	ENST00000396914.3@CHCHD4	ENST00000396914.3	protein_coding	14124655,14116426,14112093	14124858,14116524,14113194	Gene ID= ENSG00000163528.12 TPM= 20.27 Transcript Type= protein_coding
chr3	14120830	14123241	14120830	14123241	-	transcript484.chr3.nnic@NA	transcript484.chr3.nnic	NA	14120830	14123241	Gene ID= novel_gene_chr3_485 TPM= 1.93 Transcript Type= NA
chr3	14124940	14143679	14124940	14143679	+	ENST00000306077.4@TMEM43	ENST00000306077.4	protein_coding	14124940,14129412,14130822,14131580,14132546,14132866,14133739,14134770,14135158,14135807,14139180,14141593	14125205,14129561,14130956,14131674,14132595,14132935,14133809,14134891,14135232,14135908,14139297,14143679	Gene ID= ENSG00000170876.7 TPM= 209.47 Transcript Type= protein_coding
chr3	14145147	14178783	14145147	14178783	-	ENST00000285021.11@XPC	ENST00000285021.11	protein_coding	14178466,14172867,14170438,14168257,14167169,14165428,14164813,14159741,14158011,14156335,14152335,14148814,14148562,14147908,14147290,14145147	14178783,14173062,14170550,14168380,14167253,14165585,14164933,14159830,14158892,14156495,14152416,14148948,14148731,14148001,14147379,14146159	Gene ID= ENSG00000154767.14 TPM= 28.96 Transcript Type= protein_coding
chr3	14402576	14489347	14402576	14489347	+	ENST00000622186.4@SLC6A6	ENST00000622186.4	protein_coding	14402576,14416412,14443624,14445717,14447582,14457950,14466516,14467853,14468088,14472205,14477205,14478466,14479085,14481671,14484867	14402847,14416453,14443863,14445851,14447816,14458082,14466650,14467956,14468212,14472317,14477342,14478568,14479185,14481841,14489347	Gene ID= ENSG00000131389.16 TPM= 38.61 Transcript Type= protein_coding
chr3	14402600	14417749	14402600	14417749	+	transcript495.chr3.nic@SLC6A6	transcript495.chr3.nic	protein_coding	14402600,14416412	14402847,14417749	Gene ID= ENSG00000131389.16 TPM= 1.93 Transcript Type= NA
chr3	14516522	14540333	14516522	14540333	-	transcript503.chr3.nic@GRIP2	transcript503.chr3.nic	protein_coding	14540269,14525851,14525437,14524393,14523612,14523000,14521642,14520390,14520110,14517772,14516522	14540333,14525931,14525572,14524538,14523698,14523075,14521787,14520537,14520279,14517897,14517213	Gene ID= ENSG00000144596.12 TPM= 2.9 Transcript Type= NA
chr3	14491170	14512525	14491170	14512525	-	transcript504.chr3.nic@GRIP2	transcript504.chr3.nic	protein_coding	14511413,14511165,14509820,14507561,14506801,14505615,14503566,14496417,14494843,14491170	14512525,14511310,14509964,14507700,14506980,14505789,14503671,14496560,14494989,14493826	Gene ID= ENSG00000144596.12 TPM= 15.44 Transcript Type= NA
chr3	14514822	14540439	14514822	14540439	-	transcript505.chr3.nnic@GRIP2	transcript505.chr3.nnic	protein_coding	14540269,14525851,14525437,14524393,14523612,14523000,14521642,14520390,14520110,14514822	14540439,14525931,14525572,14524538,14523698,14523075,14521787,14520537,14520279,14517213	Gene ID= ENSG00000144596.12 TPM= 5.79 Transcript Type= NA
chr3	14520693	14540368	14520693	14540368	-	transcript515.chr3.nnic@GRIP2	transcript515.chr3.nnic	protein_coding	14540269,14525851,14525437,14524418,14523612,14523000,14520693	14540368,14525931,14525572,14524538,14523698,14523075,14521787	Gene ID= ENSG00000144596.12 TPM= 2.9 Transcript Type= NA
chr3	14516520	14523981	14516520	14523981	-	transcript517.chr3.nnic@GRIP2	transcript517.chr3.nnic	protein_coding	14523612,14523000,14521642,14520390,14520110,14516520	14523981,14523075,14521787,14520537,14520279,14517213	Gene ID= ENSG00000144596.12 TPM= 2.9 Transcript Type= NA
chr3	14530972	14533569	14530972	14533569	-	transcript521.chr3.nnic@NA	transcript521.chr3.nnic	NA	14530972	14533569	Gene ID= novel_gene_chr3_522 TPM= 1.93 Transcript Type= NA
chr3	14651736	14668137	14651736	14668137	+	transcript529.chr3.nic@CCDC174	transcript529.chr3.nic	protein_coding	14651736,14654426,14655529,14658871,14661530,14665028,14666805,14667424,14668049	14651878,14654530,14655629,14658929,14661707,14665123,14666947,14667518,14668137	Gene ID= ENSG00000154781.15 TPM= 12.55 Transcript Type= NA
chr3	14651764	14672659	14651764	14672659	+	ENST00000383794.6@CCDC174	ENST00000383794.6	protein_coding	14651764,14654426,14655529,14658871,14661530,14665028,14666805,14667424,14668049,14669934,14670896	14651878,14654530,14655629,14658929,14661707,14665123,14666947,14667518,14668181,14670086,14672659	Gene ID= ENSG00000154781.15 TPM= 1.93 Transcript Type= protein_coding
chr3	14818962	14934388	14818962	14934388	+	ENST00000285046.9@FGD5	ENST00000285046.9	protein_coding	14818962,14864128,14880572,14880742,14897509,14897939,14898739,14900403,14901003,14907640,14910861,14917249,14918754,14921918,14922411,14923046,14924008,14926070,14932577,14933131	14821596,14864260,14880630,14880772,14897669,14898095,14898826,14900453,14901061,14907711,14910929,14917332,14918833,14922017,14922548,14923175,14924138,14926198,14932731,14934388	Gene ID= ENSG00000154783.11 TPM= 1.93 Transcript Type= protein_coding
chr3	14942784	14947507	14942784	14947507	-	ENST00000424349.1@FGD5-AS1	ENST00000424349.1	antisense_RNA	14947087,14942784	14947507,14946154	Gene ID= ENSG00000225733.5 TPM= 44.4 Transcript Type= antisense_RNA
chr3	14944693	14948424	14944693	14948424	-	ENST00000426200.1@FGD5-AS1	ENST00000426200.1	antisense_RNA	14948013,14944693	14948424,14946154	Gene ID= ENSG00000225733.5 TPM= 2.9 Transcript Type= antisense_RNA
chr3	14945024	14947505	14945024	14947505	-	ENST00000440079.1@FGD5-AS1	ENST00000440079.1	antisense_RNA	14947110,14945024	14947505,14946154	Gene ID= ENSG00000225733.5 TPM= 6.76 Transcript Type= antisense_RNA
chr3	14947584	15043349	14947584	15043349	+	ENST00000425241.5@NR2C2	ENST00000425241.5	protein_coding	14947584,15003876,15013589,15016152,15020753,15023200,15024115,15028586,15030275,15032379,15034670,15038000,15039122,15042834	14947906,15003986,15013789,15016254,15020932,15023347,15024208,15028719,15030452,15032500,15034809,15038137,15039227,15043349	Gene ID= ENSG00000177463.15 TPM= 1.93 Transcript Type= protein_coding
chr3	15048518	15065335	15048518	15065335	-	ENST00000253686.6@MRPS25	ENST00000253686.6	protein_coding	15065061,15059369,15053380,15048518	15065335,15059475,15053467,15052633	Gene ID= ENSG00000131368.7 TPM= 42.47 Transcript Type= protein_coding
chr3	15059020	15065338	15059020	15065338	-	transcript586.chr3.nic@MRPS25	transcript586.chr3.nic	protein_coding	15065061,15059020	15065338,15059475	Gene ID= ENSG00000131368.7 TPM= 2.9 Transcript Type= NA
chr3	15073536	15099157	15073536	15099157	-	transcript596.chr3.nic@RBSN	transcript596.chr3.nic	protein_coding	15099035,15098119,15096535,15095973,15090399,15085861,15085000,15084735,15080732,15078075,15077062,15075606,15073536	15099157,15098274,15096710,15096288,15090539,15085961,15085045,15084896,15080802,15078161,15077164,15075710,15074930	Gene ID= ENSG00000131381.12 TPM= 2.9 Transcript Type= NA
chr3	15075652	15099157	15075652	15099157	-	transcript599.chr3.nic@RBSN	transcript599.chr3.nic	protein_coding	15099035,15098119,15096535,15095973,15090399,15085861,15085000,15084735,15082367,15080732,15078075,15077062,15075652	15099157,15098274,15096710,15096288,15090539,15085961,15085045,15084896,15082608,15080802,15078161,15077164,15075710	Gene ID= ENSG00000131381.12 TPM= 5.79 Transcript Type= NA
chr3	15073605	15099163	15073605	15099163	-	ENST00000476527.6@RBSN	ENST00000476527.6	protein_coding	15099035,15096535,15095973,15090399,15085861,15085000,15084735,15082367,15080732,15078075,15077062,15075606,15073605	15099163,15096710,15096288,15090539,15085961,15085045,15084896,15082608,15080802,15078161,15077164,15075710,15074930	Gene ID= ENSG00000131381.12 TPM= 2.9 Transcript Type= protein_coding
chr3	15070073	15099148	15070073	15099148	-	ENST00000253699.7@RBSN	ENST00000253699.7	protein_coding	15099035,15098119,15096535,15095973,15090399,15085861,15085000,15084735,15082367,15080732,15078075,15077062,15075606,15070073	15099148,15098274,15096710,15096288,15090539,15085961,15085045,15084896,15082608,15080802,15078161,15077164,15075710,15074930	Gene ID= ENSG00000131381.12 TPM= 12.55 Transcript Type= protein_coding
chr3	15095671	15099143	15095671	15099143	-	ENST00000449050.5@RBSN	ENST00000449050.5	protein_coding	15099035,15096535,15095671	15099143,15096710,15096288	Gene ID= ENSG00000131381.12 TPM= 2.9 Transcript Type= protein_coding
chr3	15206247	15252302	15206247	15252302	+	transcript610.chr3.nic@CAPN7	transcript610.chr3.nic	protein_coding	15206247,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232111,15232519,15233867,15235025,15240473,15240754,15241453,15242178,15245526,15246732,15247327,15250931,15251116	15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232158,15232665,15233973,15235145,15240617,15240853,15241588,15242253,15245671,15246794,15247457,15251023,15252302	Gene ID= ENSG00000131375.9 TPM= 1.93 Transcript Type= NA
chr3	15206253	15252302	15206253	15252302	+	transcript613.chr3.nic@CAPN7	transcript613.chr3.nic	protein_coding	15206253,15210802,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15241453,15242178,15245526,15246732,15247327,15250931,15251116	15206597,15210922,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15241588,15242253,15245671,15246794,15247457,15251023,15252302	Gene ID= ENSG00000131375.9 TPM= 1.93 Transcript Type= NA
chr3	15206125	15252302	15206125	15252302	+	transcript623.chr3.nic@CAPN7	transcript623.chr3.nic	protein_coding	15206125,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15242178,15245526,15246732,15247327,15250931,15251116	15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15242253,15245671,15246794,15247457,15251023,15252302	Gene ID= ENSG00000131375.9 TPM= 6.76 Transcript Type= NA
chr3	15206125	15252302	15206125	15252302	+	transcript626.chr3.nnic@CAPN7	transcript626.chr3.nnic	protein_coding	15206125,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15242178,15246732,15247327,15250931,15251116	15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15242253,15246794,15247457,15251023,15252302	Gene ID= ENSG00000131375.9 TPM= 10.62 Transcript Type= NA
chr3	15206243	15252918	15206243	15252918	+	ENST00000253693.6@CAPN7	ENST00000253693.6	protein_coding	15206243,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15241453,15242178,15245526,15246732,15247327,15250931,15251116	15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15241588,15242253,15245671,15246794,15247457,15251023,15252918	Gene ID= ENSG00000131375.9 TPM= 3.86 Transcript Type= protein_coding
chr3	15254853	15332629	15254853	15332629	-	ENST00000383791.7@SH3BP5	ENST00000383791.7	protein_coding	15332271,15330504,15304103,15269713,15262159,15259761,15258831,15256853,15254853	15332629,15330566,15304231,15269877,15262289,15259803,15259050,15257113,15256303	Gene ID= ENSG00000131370.15 TPM= 5.79 Transcript Type= protein_coding
chr3	15255659	15332595	15255659	15332595	-	transcript638.chr3.nnic@SH3BP5	transcript638.chr3.nnic	protein_coding	15332271,15330504,15304103,15269713,15262159,15259761,15258831,15255659	15332595,15330566,15304231,15269877,15262289,15259803,15259050,15256303	Gene ID= ENSG00000131370.15 TPM= 2.9 Transcript Type= NA
chr3	15383404	15427544	15383404	15427544	-	transcript644.chr3.nnic@METTL6	transcript644.chr3.nnic	protein_coding	15427402,15426287,15424955,15415772,15415498,15383404	15427544,15426635,15425089,15415942,15415583,15384187	Gene ID= ENSG00000206562.11 TPM= 2.9 Transcript Type= NA
chr3	15413669	15427544	15413669	15427544	-	transcript648.chr3.nic@METTL6	transcript648.chr3.nic	protein_coding	15427402,15426287,15424955,15415772,15415498,15413669	15427544,15426635,15425089,15415942,15415583,15413945	Gene ID= ENSG00000206562.11 TPM= 4.83 Transcript Type= NA
chr3	15411349	15427544	15411349	15427544	-	transcript649.chr3.nnic@METTL6	transcript649.chr3.nnic	protein_coding	15427402,15426287,15424955,15415772,15411349	15427544,15426635,15425089,15415942,15411437	Gene ID= ENSG00000206562.11 TPM= 1.93 Transcript Type= NA
chr3	15427355	15442613	15427355	15442613	+	ENST00000396842.6@EAF1	ENST00000396842.6	protein_coding	15427355,15429913,15432087,15434348,15436342,15439109	15427882,15430007,15432223,15434538,15436575,15442613	Gene ID= ENSG00000144597.13 TPM= 8.69 Transcript Type= protein_coding
chr3	15560704	15601831	15560704	15601831	-	ENST00000321169.9@HACL1	ENST00000321169.9	protein_coding	15601383,15601090,15596384,15591600,15589540,15586525,15585248,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560704	15601831,15601194,15596424,15591680,15589612,15586602,15585342,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897	Gene ID= ENSG00000131373.14 TPM= 18.58 Transcript Type= protein_coding
chr3	15560746	15601532	15560746	15601532	-	transcript663.chr3.nic@HACL1	transcript663.chr3.nic	protein_coding	15601383,15601090,15596384,15591600,15589540,15585248,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560746	15601532,15601194,15596424,15591680,15589612,15585342,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897	Gene ID= ENSG00000131373.14 TPM= 2.17 Transcript Type= NA
chr3	15560746	15601569	15560746	15601569	-	transcript664.chr3.nnic@HACL1	transcript664.chr3.nnic	protein_coding	15601383,15601090,15596384,15591600,15589540,15586525,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560746	15601569,15601194,15596424,15591680,15589612,15586602,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897	Gene ID= ENSG00000131373.14 TPM= 2.17 Transcript Type= NA
chr3	15560746	15601587	15560746	15601587	-	ENST00000451445.6@HACL1	ENST00000451445.6	protein_coding	15601383,15601090,15596384,15591600,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560746	15601587,15601194,15596424,15591680,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897	Gene ID= ENSG00000131373.14 TPM= 1.21 Transcript Type= protein_coding
chr3	15601742	15645822	15601742	15645822	+	ENST00000303498.9@BTD	ENST00000303498.9	protein_coding	15601742,15635424,15641908,15644316	15601894,15635688,15642057,15645822	Gene ID= ENSG00000169814.12 TPM= 2.9 Transcript Type= protein_coding
chr3	15657907	15660603	15657907	15660603	+	transcript715.chr3.nnic@NA	transcript715.chr3.nnic	NA	15657907	15660603	Gene ID= novel_gene_chr3_716 TPM= 1.93 Transcript Type= NA
chr3	15667239	15859610	15667239	15859610	-	transcript677.chr3.nnic@ANKRD28	transcript677.chr3.nnic	protein_coding	15859377,15814240,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15670110,15667239	15859610,15814309,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15670215,15668305	Gene ID= ENSG00000206560.11 TPM= 2.9 Transcript Type= NA
chr3	15667239	15859830	15667239	15859830	-	transcript678.chr3.nic@ANKRD28	transcript678.chr3.nic	protein_coding	15859377,15814240,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15670110,15667239	15859830,15814309,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15670556,15668305	Gene ID= ENSG00000206560.11 TPM= 3.86 Transcript Type= NA
chr3	15667242	15859830	15667242	15859830	-	transcript686.chr3.nnic@ANKRD28	transcript686.chr3.nnic	protein_coding	15859377,15814240,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15667242	15859830,15814309,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15668305	Gene ID= ENSG00000206560.11 TPM= 4.83 Transcript Type= NA
chr3	15668356	15859830	15668356	15859830	-	transcript687.chr3.nic@ANKRD28	transcript687.chr3.nic	protein_coding	15859377,15814240,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15668356	15859830,15814309,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15670556	Gene ID= ENSG00000206560.11 TPM= 2.9 Transcript Type= NA
chr3	15667236	15798184	15667236	15798184	-	ENST00000624145.3@ANKRD28	ENST00000624145.3	protein_coding	15797971,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15667236	15798184,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15670556	Gene ID= ENSG00000206560.11 TPM= 4.83 Transcript Type= protein_coding
chr3	15796645	15797952	15796645	15797952	-	transcript717.chr3.nnic@NA	transcript717.chr3.nnic	NA	15796645	15797952	Gene ID= novel_gene_chr3_718 TPM= 1.93 Transcript Type= NA
chr3	15894239	16137521	15894239	16137521	+	transcript719.chr3.nnic@NA	transcript719.chr3.nnic	NA	15894239,15946784,15947135,16137391	15894285,15946855,15947192,16137521	Gene ID= novel_gene_chr3_720 TPM= 2.9 Transcript Type= NA
chr3	16174649	16229746	16174649	16229746	+	ENST00000339732.9@GALNT15	ENST00000339732.9	protein_coding	16174649,16195760,16200619,16208503,16211124,16212569,16219403,16219910,16222615,16227354	16175690,16195926,16200823,16208670,16211241,16212763,16219534,16220014,16222758,16229746	Gene ID= ENSG00000131386.17 TPM= 6.76 Transcript Type= protein_coding
chr3	16231145	16231341	16231145	16231341	+	transcript732.chr3.nnic@NA	transcript732.chr3.nnic	NA	16231145	16231341	Gene ID= novel_gene_chr3_733 TPM= 1.93 Transcript Type= NA
chr3	16257978	16264972	16257978	16264972	-	ENST00000488423.1@DPH3	ENST00000488423.1	protein_coding	16264769,16264155,16257978	16264972,16264229,16260829	Gene ID= ENSG00000154813.9 TPM= 99.91 Transcript Type= protein_coding
chr3	16257979	16264969	16257979	16264969	-	ENST00000383775.4@DPH3	ENST00000383775.4	protein_coding	16264769,16257979	16264969,16260829	Gene ID= ENSG00000154813.9 TPM= 14 Transcript Type= protein_coding
chr3	16265160	16306086	16265160	16306086	+	ENST00000627468.2@OXNAD1	ENST00000627468.2	protein_coding	16265160,16269126,16270929,16271659,16286342,16294856,16301626,16302640,16303408	16265505,16269275,16271071,16271722,16286448,16294997,16301868,16302748,16306086	Gene ID= ENSG00000154814.13 TPM= 2.9 Transcript Type= protein_coding
chr3	16265199	16306087	16265199	16306087	+	ENST00000285083.9@OXNAD1	ENST00000285083.9	protein_coding	16265199,16269126,16270945,16271659,16286342,16294856,16301626,16302640,16303408	16265505,16269275,16271071,16271722,16286448,16294997,16301868,16302748,16306087	Gene ID= ENSG00000154814.13 TPM= 7.72 Transcript Type= protein_coding
chr3	16315856	16513706	16315856	16513706	-	ENST00000334133.8@RFTN1	ENST00000334133.8	protein_coding	16513442,16493725,16433851,16409375,16377718,16370076,16357932,16326773,16323376,16315856	16513706,16493877,16434037,16409483,16378102,16370279,16358047,16326876,16323457,16317232	Gene ID= ENSG00000131378.13 TPM= 14.48 Transcript Type= protein_coding
chr3	16884232	17090593	16884232	17090593	+	transcript759.chr3.nnic@PLCL2	transcript759.chr3.nnic	protein_coding	16884232,16884822,17009674,17014708,17042874,17067956,17089733	16884536,16885366,17012160,17014911,17042949,17068065,17090593	Gene ID= ENSG00000154822.17 TPM= 8.04 Transcript Type= NA
chr3	16884543	17090593	16884543	17090593	+	transcript760.chr3.nnic@PLCL2	transcript760.chr3.nnic	protein_coding	16884543,16884822,17009674,17014708,17042874,17067956,17089733	16884638,16885366,17012160,17014911,17042949,17068065,17090593	Gene ID= ENSG00000154822.17 TPM= 3.21 Transcript Type= NA
chr3	16884959	17090594	16884959	17090594	+	ENST00000615277.4@PLCL2	ENST00000615277.4	protein_coding	16884959,17009674,17014708,17042874,17067956,17089733	16885366,17012160,17014911,17042949,17068065,17090594	Gene ID= ENSG00000154822.17 TPM= 11.9 Transcript Type= protein_coding
chr3	16882583	16884911	16882583	16884911	+	transcript769.chr3.nnic@NA	transcript769.chr3.nnic	NA	16882583	16884911	Gene ID= novel_gene_chr3_770 TPM= 3.86 Transcript Type= NA
chr3	18345387	18425337	18345387	18425337	-	ENST00000338745.10@SATB1	ENST00000338745.10	protein_coding	18423627,18420757,18416902,18416007,18415111,18397179,18394462,18386399,18378170,18351992,18345387	18425337,18420991,18417078,18416133,18415234,18397290,18394916,18386611,18378325,18352195,18349682	Gene ID= ENSG00000182568.16 TPM= 24.13 Transcript Type= protein_coding
chr3	19947079	19985175	19947079	19985175	+	ENST00000273047.8@RAB5A	ENST00000273047.8	protein_coding	19947079,19950806,19975601,19976047,19978310,19983708	19947521,19951061,19975752,19976169,19978403,19985175	Gene ID= ENSG00000144566.10 TPM= 71.43 Transcript Type= protein_coding
chr3	19950820	19954521	19950820	19954521	+	transcript792.chr3.nnic@NA	transcript792.chr3.nnic	NA	19950820	19954521	Gene ID= novel_gene_chr3_793 TPM= 24.13 Transcript Type= NA
chr3	20040023	20154404	20040023	20154404	+	ENST00000263754.4@KAT2B	ENST00000263754.4	protein_coding	20040023,20072333,20095263,20099862,20101287,20111596,20114882,20119598,20122668,20125905,20127423,20136942,20140221,20146316,20147963,20148243,20148403,20152332	20040780,20072459,20095408,20099954,20101468,20111787,20114988,20119723,20122804,20126113,20127549,20137052,20140364,20146430,20147999,20148306,20148487,20154404	Gene ID= ENSG00000114166.7 TPM= 33.79 Transcript Type= protein_coding
chr3	23203293	23591793	23203293	23591793	+	ENST00000396703.5@UBE2E2	ENST00000396703.5	protein_coding	23203293,23208692,23217262,23499608,23532554,23589734	23203464,23208875,23217312,23499740,23532701,23591793	Gene ID= ENSG00000182247.9 TPM= 24.13 Transcript Type= protein_coding
chr3	23504914	23507129	23504914	23507129	-	transcript806.chr3.nnic@NA	transcript806.chr3.nnic	NA	23504914	23507129	Gene ID= novel_gene_chr3_807 TPM= 2.9 Transcript Type= NA
chr3	23892288	23917055	23892288	23917055	-	transcript815.chr3.nic@NKIRAS1	transcript815.chr3.nic	protein_coding	23916861,23911329,23910811,23900808,23892288	23917055,23911446,23910921,23901049,23893337	Gene ID= ENSG00000197885.10 TPM= 8.69 Transcript Type= NA
chr3	23892081	23917065	23892081	23917065	-	ENST00000425478.6@NKIRAS1	ENST00000425478.6	protein_coding	23916784,23911329,23910811,23900808,23892081	23917065,23911450,23910921,23901049,23893337	Gene ID= ENSG00000197885.10 TPM= 32.82 Transcript Type= protein_coding
chr3	23892310	23916924	23892310	23916924	-	ENST00000415901.6@NKIRAS1	ENST00000415901.6	protein_coding	23916784,23911329,23910811,23900804,23892310	23916924,23911450,23910921,23901049,23893333	Gene ID= ENSG00000197885.10 TPM= 20.27 Transcript Type= protein_coding
chr3	23892307	23916963	23892307	23916963	-	ENST00000412028.5@NKIRAS1	ENST00000412028.5	protein_coding	23916861,23911329,23910811,23900804,23892307	23916963,23911446,23910921,23901049,23893333	Gene ID= ENSG00000197885.10 TPM= 6.76 Transcript Type= protein_coding
chr3	23916545	23920977	23916545	23920977	+	ENST00000307839.9@RPL15	ENST00000307839.9	protein_coding	23916545,23917850,23918440,23919196	23917173,23918031,23918576,23920977	Gene ID= ENSG00000174748.18 TPM= 129.83 Transcript Type= protein_coding
chr3	23917131	23920820	23917131	23920820	+	ENST00000413699.5@RPL15	ENST00000413699.5	protein_coding	23917131,23917850,23918440,23919196	23917239,23918031,23918576,23920820	Gene ID= ENSG00000174748.18 TPM= 41.99 Transcript Type= protein_coding
chr3	23916804	23920856	23916804	23920856	+	ENST00000611050.4@RPL15	ENST00000611050.4	protein_coding	23916804,23917837,23918440,23919196	23917173,23918031,23918576,23920856	Gene ID= ENSG00000174748.18 TPM= 47.78 Transcript Type= protein_coding
chr3	23917148	23919791	23917148	23919791	+	ENST00000435882.5@RPL15	ENST00000435882.5	protein_coding	23917148,23917850,23918440,23919196	23917295,23918031,23918576,23919791	Gene ID= ENSG00000174748.18 TPM= 11.1 Transcript Type= protein_coding
chr3	23945260	23980618	23945260	23980618	+	ENST00000312521.8@NR1D2	ENST00000312521.8	protein_coding	23945260,23954537,23956037,23959671,23961977,23964977,23967813,23977223	23945594,23954803,23956125,23959815,23962605,23965162,23968023,23980618	Gene ID= ENSG00000174738.12 TPM= 29.2 Transcript Type= protein_coding
chr3	23945262	23992745	23945262	23992745	+	transcript851.chr3.nnic@NR1D2	transcript851.chr3.nnic	protein_coding	23945262,23954537,23956037,23959671,23961977,23964977,23967813,23992163	23945594,23954803,23956125,23959815,23962605,23965162,23968023,23992745	Gene ID= ENSG00000174738.12 TPM= 3.3 Transcript Type= NA
chr3	23945262	23980618	23945262	23980618	+	transcript857.chr3.nic@NR1D2	transcript857.chr3.nic	protein_coding	23945262,23954537,23956037,23959671,23961977,23964977,23967813,23977223	23945594,23954803,23956125,23959815,23963330,23965162,23968023,23980618	Gene ID= ENSG00000174738.12 TPM= 3.94 Transcript Type= NA
chr3	23945262	23980617	23945262	23980617	+	transcript860.chr3.nnic@NR1D2	transcript860.chr3.nnic	protein_coding	23945262,23954537,23956037,23959671,23961977,23964977,23977223	23945594,23954803,23956125,23959815,23962605,23965162,23980617	Gene ID= ENSG00000174738.12 TPM= 4.1 Transcript Type= NA
chr3	23945262	23978497	23945262	23978497	+	transcript863.chr3.nnic@NR1D2	transcript863.chr3.nnic	protein_coding	23945262,23954537,23959671,23961977,23964977,23967813,23977223	23945594,23954803,23959815,23962605,23965162,23968023,23978497	Gene ID= ENSG00000174738.12 TPM= 1.93 Transcript Type= NA
chr3	24122838	24495013	24122838	24495013	-	transcript841.chr3.nic@THRB	transcript841.chr3.nic	protein_coding	24494795,24337300,24228938,24190074,24152390,24146675,24143501,24133316,24127499,24122838	24495013,24337371,24229001,24190334,24152490,24146822,24143706,24133462,24127757,24123125	Gene ID= ENSG00000151090.17 TPM= 2.9 Transcript Type= NA
chr3	24122838	24495254	24122838	24495254	-	transcript842.chr3.nic@THRB	transcript842.chr3.nic	protein_coding	24495133,24337300,24228938,24190074,24152390,24146675,24143501,24133316,24127499,24122838	24495254,24337371,24229001,24190334,24152490,24146822,24143706,24133462,24127757,24123125	Gene ID= ENSG00000151090.17 TPM= 2.9 Transcript Type= NA
chr3	25428311	25597932	25428311	25597932	+	ENST00000330688.8@RARB	ENST00000330688.8	protein_coding	25428311,25461193,25501182,25569758,25580546,25593503,25594520,25596420	25428888,25461341,25501323,25569918,25580722,25593707,25594678,25597932	Gene ID= ENSG00000077092.18 TPM= 4.83 Transcript Type= protein_coding
chr3	25597986	25664945	25597986	25664945	-	transcript872.chr3.nnic@TOP2B	transcript872.chr3.nnic	protein_coding	25664229,25645300,25643694,25642322,25638165,25637215,25635936,25633841,25632693,25630801,25630312,25630029,25629035,25628847,25627187,25626772,25626560,25624682,25624297,25623515,25620682,25619862,25618654,25618418,25615431,25615205,25612515,25609568,25609183,25607171,25606043,25604760,25601100,25599435,25597986	25664945,25645455,25643784,25642385,25638310,25637312,25636148,25634014,25632794,25630939,25630469,25630154,25629145,25628952,25627296,25626864,25626674,25624803,25624445,25623746,25620816,25620062,25618849,25618509,25615586,25615288,25612709,25609712,25609344,25607375,25606122,25604870,25601225,25599529,25598477	Gene ID= ENSG00000077097.15 TPM= 14.96 Transcript Type= NA
chr3	25597986	25664945	25597986	25664945	-	transcript877.chr3.nnic@TOP2B	transcript877.chr3.nnic	protein_coding	25664229,25645300,25643694,25642322,25638165,25637215,25635936,25633841,25632693,25632446,25630801,25630312,25630029,25629035,25628847,25627187,25626772,25626560,25624682,25624297,25623515,25620682,25619862,25618654,25618418,25615431,25615205,25612515,25609568,25609183,25607171,25606043,25601100,25599435,25597986	25664945,25645455,25643784,25642385,25638310,25637312,25636148,25634014,25632794,25632583,25630939,25630469,25630154,25629145,25628952,25627296,25626864,25626674,25624803,25624445,25623746,25620816,25620062,25618849,25618509,25615586,25615288,25612709,25609712,25609344,25607375,25606122,25601225,25599529,25598477	Gene ID= ENSG00000077097.15 TPM= 9.17 Transcript Type= NA
chr3	25625571	25664945	25625571	25664945	-	transcript879.chr3.nic@TOP2B	transcript879.chr3.nic	protein_coding	25664229,25645300,25643694,25642322,25638165,25637215,25635936,25633841,25632693,25632446,25630801,25630312,25630029,25629035,25628847,25625571	25664945,25645455,25643784,25642385,25638310,25637312,25636148,25634014,25632794,25632583,25630939,25630469,25630154,25629145,25628952,25627296	Gene ID= ENSG00000077097.15 TPM= 1.93 Transcript Type= NA
chr3	25719113	25783551	25719113	25783551	-	ENST00000280700.9@NGLY1	ENST00000280700.9	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25732319,25729133,25720014,25719113	25783551,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25732483,25729318,25720191,25719635	Gene ID= ENSG00000151092.16 TPM= 148.66 Transcript Type= protein_coding
chr3	25719276	25783381	25719276	25783381	-	ENST00000308710.9@NGLY1	ENST00000308710.9	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736309,25733872,25732319,25729133,25720014,25719276	25783381,25778688,25764311,25751263,25739799,25737455,25736400,25733982,25732483,25729318,25720191,25719635	Gene ID= ENSG00000151092.16 TPM= 1.93 Transcript Type= protein_coding
chr3	25719271	25783438	25719271	25783438	-	ENST00000396649.7@NGLY1	ENST00000396649.7	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25732319,25729133,25719271	25783438,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25732483,25729318,25719635	Gene ID= ENSG00000151092.16 TPM= 1.93 Transcript Type= protein_coding
chr3	25790094	25797137	25790094	25797137	+	transcript914.chr3.nnic@OXSM	transcript914.chr3.nnic	protein_coding	25790094,25794092	25790816,25797137	Gene ID= ENSG00000151093.7 TPM= 1.93 Transcript Type= NA
chr3	25790080	25794534	25790080	25794534	+	ENST00000280701.7@OXSM	ENST00000280701.7	protein_coding	25790080,25790990,25794092	25790147,25791997,25794534	Gene ID= ENSG00000151093.7 TPM= 16.41 Transcript Type= protein_coding
chr3	27385892	27484491	27385892	27484491	-	transcript928.chr3.nic@SLC4A7	transcript928.chr3.nic	protein_coding	27484079,27452417,27448651,27437388,27436388,27433955,27431298,27424037,27421622,27420700,27418486,27411642,27409356,27404830,27403139,27400764,27398192,27397684,27394954,27394518,27391740,27389931,27385892	27484491,27452498,27448797,27437526,27436548,27434104,27431669,27424152,27421779,27420787,27418632,27411748,27409530,27404963,27403384,27400869,27398353,27397797,27395115,27394769,27391808,27390104,27386023	Gene ID= ENSG00000033867.16 TPM= 8.69 Transcript Type= NA
chr3	27385892	27484400	27385892	27484400	-	transcript929.chr3.nic@SLC4A7	transcript929.chr3.nic	protein_coding	27484079,27452417,27448651,27437388,27436388,27433916,27424037,27421622,27420700,27418486,27411642,27409356,27404830,27403139,27400764,27398192,27397684,27394954,27394518,27391740,27389931,27385892	27484400,27452498,27448797,27437526,27436548,27434104,27424152,27421779,27420787,27418632,27411748,27409530,27404963,27403384,27400869,27398353,27397797,27395115,27394769,27391808,27390104,27386023	Gene ID= ENSG00000033867.16 TPM= 1.93 Transcript Type= NA
chr3	28241607	28319773	28241607	28319773	+	transcript934.chr3.nnic@CMC1	transcript934.chr3.nnic	protein_coding	28241607,28253731,28263291,28316333,28319509	28241812,28253765,28263380,28316423,28319773	Gene ID= ENSG00000187118.12 TPM= 1.93 Transcript Type= NA
chr3	28241595	28325142	28241595	28325142	+	ENST00000466830.5@CMC1	ENST00000466830.5	protein_coding	28241595,28263291,28316333,28319509	28241812,28263380,28316423,28325142	Gene ID= ENSG00000187118.12 TPM= 9.65 Transcript Type= protein_coding
chr3	28241608	28319770	28241608	28319770	+	transcript937.chr3.nic@CMC1	transcript937.chr3.nic	protein_coding	28241608,28316333,28318732,28319509	28241812,28316423,28318879,28319770	Gene ID= ENSG00000187118.12 TPM= 1.93 Transcript Type= NA
chr3	28241618	28319771	28241618	28319771	+	ENST00000423894.5@CMC1	ENST00000423894.5	protein_coding	28241618,28316333,28319509	28241812,28316423,28319771	Gene ID= ENSG00000187118.12 TPM= 11.58 Transcript Type= protein_coding
chr3	28321047	28349127	28321047	28349127	-	ENST00000479665.5@AZI2	ENST00000479665.5	protein_coding	28348601,28340402,28338493,28337937,28336737,28332369,28326832,28321047	28349127,28340622,28338615,28338036,28336885,28332427,28326950,28324454	Gene ID= ENSG00000163512.13 TPM= 52.13 Transcript Type= protein_coding
chr3	28323355	28349025	28323355	28349025	-	transcript960.chr3.nnic@AZI2	transcript960.chr3.nnic	protein_coding	28348601,28340402,28338493,28336737,28332369,28326832,28323355	28349025,28340622,28338615,28336885,28332427,28326950,28324454	Gene ID= ENSG00000163512.13 TPM= 5.31 Transcript Type= NA
chr3	28349157	28526358	28349157	28526358	+	transcript947.chr3.nic@ZCWPW2	transcript947.chr3.nic	protein_coding	28349157,28413056,28435110,28478814,28492127,28514064,28515554,28520992,28524527	28349203,28413400,28435269,28478931,28492173,28514122,28515621,28521116,28526358	Gene ID= ENSG00000206559.7 TPM= 2.9 Transcript Type= NA
chr3	28349157	28525145	28349157	28525145	+	transcript951.chr3.nic@ZCWPW2	transcript951.chr3.nic	protein_coding	28349157,28413056,28435110,28492127,28514064,28515554,28520992,28524527	28349203,28413400,28435269,28492173,28514122,28515621,28521116,28525145	Gene ID= ENSG00000206559.7 TPM= 1.93 Transcript Type= NA
chr3	28575408	28758340	28575408	28758340	+	transcript971.chr3.nnic@RBMS3	transcript971.chr3.nnic	protein_coding	28575408,28576273,28757109,28757350	28575667,28576496,28757241,28758340	Gene ID= ENSG00000144642.21 TPM= 4.83 Transcript Type= NA
chr3	28673715	28758340	28673715	28758340	+	transcript978.chr3.nnic@RBMS3	transcript978.chr3.nnic	protein_coding	28673715,28757109,28757350	28673783,28757241,28758340	Gene ID= ENSG00000144642.21 TPM= 2.9 Transcript Type= NA
chr3	29280982	30010391	29280982	30010391	+	ENST00000434693.6@RBMS3	ENST00000434693.6	protein_coding	29280982,29434746,29488441,29587114,29739720,29762910,29868858,29884162,29897379,29899705,29936086,29944207,29988143,29991082,30003856	29281756,29434915,29488499,29587205,29739877,29762989,29868964,29884208,29897475,29899755,29936196,29944254,29988223,29991209,30010391	Gene ID= ENSG00000144642.21 TPM= 50.2 Transcript Type= protein_coding
chr3	30606502	30694134	30606502	30694134	+	ENST00000295754.9@TGFBR2	ENST00000295754.9	protein_coding	30606502,30644747,30650270,30671638,30674105,30688384,30691420	30606977,30644915,30650460,30672437,30674246,30688511,30694134	Gene ID= ENSG00000163513.17 TPM= 32.82 Transcript Type= protein_coding
chr3	30645493	30648400	30645493	30648400	-	transcript996.chr3.nnic@NA	transcript996.chr3.nnic	NA	30645493	30648400	Gene ID= novel_gene_chr3_997 TPM= 1.93 Transcript Type= NA
chr3	31532608	31637606	31532608	31637606	+	transcript1005.chr3.nic@STT3B	transcript1005.chr3.nic	protein_coding	31532608,31576396,31579809,31596798,31600360,31615105,31616929,31617940,31619676,31622097,31623674,31624914,31625954,31629298,31632935,31635984	31533312,31576504,31580096,31596863,31600459,31615203,31617075,31617988,31619830,31622308,31623861,31625085,31626127,31629411,31633184,31637606	Gene ID= ENSG00000163527.9 TPM= 4.83 Transcript Type= NA
chr3	31532604	31637616	31532604	31637616	+	transcript1009.chr3.nnic@STT3B	transcript1009.chr3.nnic	protein_coding	31532604,31576396,31579809,31596798,31600360,31615105,31616929,31617940,31619676,31622097,31623674,31624914,31625954,31629298,31635984	31533312,31576504,31580096,31596863,31600459,31615203,31617075,31617988,31619830,31622308,31623861,31625085,31626127,31629411,31637616	Gene ID= ENSG00000163527.9 TPM= 2.9 Transcript Type= NA
chr3	31532790	31637622	31532790	31637622	+	ENST00000295770.3@STT3B	ENST00000295770.3	protein_coding	31532790,31576396,31579809,31596798,31600360,31615105,31616929,31617940,31619676,31622097,31623674,31624914,31625954,31629298,31632935,31635984	31533312,31576504,31580096,31596863,31600459,31615203,31617075,31617988,31619830,31622308,31623861,31625085,31626127,31629411,31633147,31637622	Gene ID= ENSG00000163527.9 TPM= 45.37 Transcript Type= protein_coding
chr3	31657890	31981302	31657890	31981302	-	ENST00000396556.6@OSBPL10	ENST00000396556.6	protein_coding	31980899,31879655,31876433,31830040,31747910,31733257,31702359,31683634,31670797,31668642,31664079,31657890	31981302,31879830,31876512,31830231,31748120,31733411,31702508,31684114,31670983,31668824,31664232,31662116	Gene ID= ENSG00000144645.13 TPM= 1.93 Transcript Type= protein_coding
chr3	32106511	32168713	32106511	32168713	+	ENST00000282541.9@GPD1L	ENST00000282541.9	protein_coding	32106511,32128076,32138587,32140228,32146622,32158876,32159568,32165814	32106758,32128253,32138727,32140366,32146734,32159109,32159674,32168713	Gene ID= ENSG00000152642.10 TPM= 159.92 Transcript Type= protein_coding
chr3	32106621	32168706	32106621	32168706	+	transcript1027.chr3.nic@GPD1L	transcript1027.chr3.nic	protein_coding	32106621,32128076,32140228,32146622,32158876,32159568,32165814	32106758,32128253,32140366,32146734,32159109,32159674,32168706	Gene ID= ENSG00000152642.10 TPM= 17.06 Transcript Type= NA
chr3	32392443	32450393	32392443	32450393	+	transcript1035.chr3.nnic@CMTM7	transcript1035.chr3.nnic	protein_coding	32392443,32441840,32449454	32392572,32442013,32450393	Gene ID= ENSG00000153551.13 TPM= 1.93 Transcript Type= NA
chr3	32481312	32503408	32481312	32503408	-	ENST00000205636.3@CMTM6	ENST00000205636.3	protein_coding	32502608,32491710,32487938,32481312	32503408,32491886,32488036,32484097	Gene ID= ENSG00000091317.7 TPM= 3.86 Transcript Type= protein_coding
chr3	32534604	32570830	32534604	32570830	-	transcript1048.chr3.nic@DYNC1LI1	transcript1048.chr3.nic	protein_coding	32570625,32570346,32545849,32544876,32541037,32537011,32534604	32570830,32570419,32545965,32545106,32541206,32537104,32534646	Gene ID= ENSG00000144635.8 TPM= 3.86 Transcript Type= NA
chr3	32525971	32570874	32525971	32570874	-	ENST00000273130.8@DYNC1LI1	ENST00000273130.8	protein_coding	32570625,32570346,32545849,32544876,32541037,32537011,32534511,32532986,32530461,32530284,32529540,32528446,32525971	32570874,32570419,32545965,32545106,32541206,32537104,32534646,32533097,32530520,32530328,32529660,32528601,32526908	Gene ID= ENSG00000144635.8 TPM= 56.95 Transcript Type= protein_coding
chr3	32570365	32572510	32570365	32572510	+	transcript1050.chr3.nnic@NA	transcript1050.chr3.nnic	NA	32570365	32572510	Gene ID= novel_gene_chr3_1051 TPM= 7.72 Transcript Type= NA
chr3	32685145	32773875	32685145	32773875	+	ENST00000328834.9@CNOT10	ENST00000328834.9	protein_coding	32685145,32703868,32704811,32708670,32713227,32716225,32717154,32720114,32725450,32727668,32733423,32734800,32737410,32759458,32762733,32764455,32764682,32769887,32773457	32685482,32703962,32704972,32708820,32713369,32716311,32717237,32720231,32725599,32727870,32733544,32734976,32737490,32759571,32762863,32764490,32764809,32769962,32773875	Gene ID= ENSG00000182973.18 TPM= 17.38 Transcript Type= protein_coding
chr3	32685186	32773871	32685186	32773871	+	transcript1058.chr3.nnic@CNOT10	transcript1058.chr3.nnic	protein_coding	32685186,32703868,32704811,32708670,32713227,32716225,32717154,32720114,32725450,32727668,32733423,32759458,32762733,32764455,32764682,32769887,32773457	32685482,32703962,32704972,32708820,32713369,32716311,32717237,32720231,32725599,32727870,32733544,32759571,32762863,32764490,32764809,32769962,32773871	Gene ID= ENSG00000182973.18 TPM= 1.93 Transcript Type= NA
chr3	32996609	33096835	32996609	33096835	-	ENST00000399402.7@GLB1	ENST00000399402.7	protein_coding	33096719,33072544,33068820,33068230,33065463,33058089,33053491,33051883,33051758,33046120,33024251,33021566,33018448,33016709,33014056,32996609	33096835,33072713,33068970,33068290,33065557,33058269,33053549,33052004,33051798,33046232,33024325,33021655,33018561,33016840,33014310,32997344	Gene ID= ENSG00000170266.15 TPM= 1.93 Transcript Type= protein_coding
chr3	32996608	33097230	32996608	33097230	-	ENST00000307363.9@GLB1	ENST00000307363.9	protein_coding	33097011,33072544,33068820,33068230,33065463,33058089,33053491,33051883,33051758,33046120,33024251,33021566,33018448,33016709,33014056,32996608	33097230,33072713,33068970,33068290,33065557,33058269,33053549,33052004,33051798,33046232,33024325,33021655,33018561,33016840,33014310,32997344	Gene ID= ENSG00000170266.15 TPM= 10.62 Transcript Type= protein_coding
chr3	33150042	33219215	33150042	33219215	-	ENST00000309558.7@SUSD5	ENST00000309558.7	protein_coding	33218686,33213928,33207808,33174886,33150042	33219215,33214105,33207926,33175074,33154033	Gene ID= ENSG00000173705.8 TPM= 3.86 Transcript Type= protein_coding
chr3	33388336	33440378	33388336	33440378	-	ENST00000283629.7@UBP1	ENST00000283629.7	protein_coding	33439736,33425590,33416758,33412722,33411581,33409449,33409236,33408690,33402801,33400962,33400189,33397045,33396162,33393312,33392563,33388336	33440378,33425741,33416834,33412827,33411687,33409601,33409346,33408797,33402904,33401016,33400282,33397135,33396280,33393454,33392614,33390368	Gene ID= ENSG00000153560.11 TPM= 4.83 Transcript Type= protein_coding
chr3	33496993	33718259	33496993	33718259	-	transcript1085.chr3.nnic@CLASP2	transcript1085.chr3.nnic	protein_coding	33717808,33696855,33689829,33688277,33687060,33684359,33663445,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33596711,33594951,33592395,33592213,33584750,33581821,33576169,33574473,33573110,33570727,33560808,33559307,33559125,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496993	33718259,33696933,33689932,33688368,33687135,33684456,33663515,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33596734,33594968,33592496,33592239,33584920,33581928,33576275,33574496,33573354,33570790,33560971,33559385,33559175,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717	Gene ID= ENSG00000163539.16 TPM= 5.31 Transcript Type= NA
chr3	33496993	33718259	33496993	33718259	-	transcript1088.chr3.nnic@CLASP2	transcript1088.chr3.nnic	protein_coding	33717808,33696855,33689829,33688277,33687060,33684359,33663445,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33592213,33584750,33581821,33576169,33574473,33573110,33570727,33560808,33559307,33559125,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496993	33718259,33696933,33689932,33688368,33687135,33684456,33663515,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33592239,33584920,33581928,33576275,33574496,33573354,33570790,33560971,33559385,33559175,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717	Gene ID= ENSG00000163539.16 TPM= 6.27 Transcript Type= NA
chr3	33797018	33799049	33797018	33799049	-	transcript1111.chr3.nnic@NA	transcript1111.chr3.nnic	NA	33797018	33799049	Gene ID= novel_gene_chr3_1112 TPM= 1.93 Transcript Type= NA
chr3	33798571	33869707	33798571	33869707	+	ENST00000457054.6@PDCD6IP	ENST00000457054.6	protein_coding	33798571,33812072,33813559,33821955,33825187,33826480,33828838,33836044,33838204,33841897,33844112,33845419,33852488,33853879,33855166,33864006,33865243,33866351	33798937,33812126,33813628,33822082,33825340,33826580,33828969,33836266,33838327,33842074,33844223,33845588,33852736,33854013,33855260,33864129,33865430,33869707	Gene ID= ENSG00000170248.13 TPM= 23 Transcript Type= protein_coding
chr3	33798352	33869702	33798352	33869702	+	ENST00000307296.7@PDCD6IP	ENST00000307296.7	protein_coding	33798352,33812072,33813559,33821955,33825187,33826480,33828853,33836044,33838204,33841897,33844112,33845419,33852488,33853879,33855166,33864006,33865243,33866351	33798937,33812126,33813628,33822082,33825340,33826580,33828969,33836266,33838327,33842074,33844223,33845588,33852736,33854013,33855260,33864129,33865430,33869702	Gene ID= ENSG00000170248.13 TPM= 16.25 Transcript Type= protein_coding
chr3	33798571	33867005	33798571	33867005	+	transcript1106.chr3.nnic@PDCD6IP	transcript1106.chr3.nnic	protein_coding	33798571,33812072,33813559,33821955,33825187,33826480,33828838,33836044,33838204,33841897,33844112,33845419,33852488,33853879,33855166,33864006,33866351	33798937,33812126,33813628,33822082,33825340,33826580,33828969,33836266,33838327,33842074,33844223,33845588,33852736,33854013,33855260,33864129,33867005	Gene ID= ENSG00000170248.13 TPM= 10.94 Transcript Type= NA
chr3	35642336	35794496	35642336	35794496	+	transcript1114.chr3.nic@ARPP21	transcript1114.chr3.nic	protein_coding	35642336,35679787,35681714,35682848,35683726,35687739,35689307,35690081,35690865,35706974,35708969,35715439,35717298,35721605,35729303,35737178,35738214,35739317,35743839,35792382,35793701	35642408,35679960,35681880,35682889,35683815,35687883,35689385,35690140,35691005,35707082,35709070,35715476,35717357,35721834,35729536,35737362,35738318,35739577,35743965,35792530,35794496	Gene ID= ENSG00000172995.16 TPM= 21.24 Transcript Type= NA
chr3	35679624	35794496	35679624	35794496	+	transcript1115.chr3.nic@ARPP21	transcript1115.chr3.nic	protein_coding	35679624,35679787,35681714,35682848,35683726,35687739,35689307,35690081,35690865,35706974,35708969,35715439,35717298,35721605,35729303,35737178,35738214,35739317,35743839,35792382,35793701	35679692,35679960,35681880,35682889,35683815,35687883,35689385,35690140,35691005,35707082,35709070,35715476,35717357,35721834,35729536,35737362,35738318,35739577,35743965,35792530,35794496	Gene ID= ENSG00000172995.16 TPM= 21.24 Transcript Type= NA
chr3	35639443	35687789	35639443	35687789	+	transcript1128.chr3.nic@ARPP21	transcript1128.chr3.nic	protein_coding	35639443,35679787,35681714,35682848,35683726,35687739	35640398,35679960,35681880,35682889,35683815,35687789	Gene ID= ENSG00000172995.16 TPM= 16.41 Transcript Type= NA
chr3	35679624	35685885	35679624	35685885	+	ENST00000396482.6@ARPP21	ENST00000396482.6	protein_coding	35679624,35679787,35681714,35682848,35683726,35684021	35679701,35679960,35681880,35682889,35683815,35685885	Gene ID= ENSG00000172995.16 TPM= 4.83 Transcript Type= protein_coding
chr3	35639470	35643372	35639470	35643372	+	transcript1135.chr3.nnic@NA	transcript1135.chr3.nnic	NA	35639470	35643372	Gene ID= novel_gene_chr3_1136 TPM= 12.55 Transcript Type= NA
chr3	36989291	36993186	36989291	36993186	-	transcript1155.chr3.nnic@NA	transcript1155.chr3.nnic	NA	36989291	36993186	Gene ID= novel_gene_chr3_1156 TPM= 6.76 Transcript Type= NA
chr3	36993804	37050844	36993804	37050844	+	ENST00000435176.5@MLH1	ENST00000435176.5	protein_coding	36993804,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486	36993890,36996709,37001048,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050844	Gene ID= ENSG00000076242.14 TPM= 4.83 Transcript Type= protein_coding
chr3	36993487	37050842	36993487	37050842	+	transcript1149.chr3.nic@MLH1	transcript1149.chr3.nic	protein_coding	36993487,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486	36993663,36996709,37001053,37004474,37007063,37008905,37011862,37012099,37014544,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050842	Gene ID= ENSG00000076242.14 TPM= 3.21 Transcript Type= NA
chr3	36993530	37047740	36993530	37047740	+	transcript1150.chr3.nic@MLH1	transcript1150.chr3.nic	protein_coding	36993530,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519	36993663,36996709,37001053,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047740	Gene ID= ENSG00000076242.14 TPM= 2.25 Transcript Type= NA
chr3	36993487	37026083	36993487	37026083	+	transcript1152.chr3.nic@MLH1	transcript1152.chr3.nic	protein_coding	36993487,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637	36993663,36996709,37001053,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026083	Gene ID= ENSG00000076242.14 TPM= 2.25 Transcript Type= NA
chr3	37053004	37176356	37053004	37176356	-	transcript1165.chr3.nic@LRRFIP2	transcript1165.chr3.nic	protein_coding	37176060,37174539,37148894,37129063,37127630,37121635,37121492,37115054,37112915,37110991,37109653,37109527,37108637,37108073,37105455,37102924,37096616,37094792,37091467,37083636,37075024,37072790,37066224,37065810,37063742,37058790,37055086,37054411,37053004	37176356,37174605,37149038,37129149,37127680,37121691,37121536,37115095,37112980,37111065,37109703,37109571,37108684,37108129,37105523,37103013,37096660,37094908,37091538,37083806,37075116,37072882,37066325,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 48 Transcript Type= NA
chr3	37053004	37176356	37053004	37176356	-	transcript1176.chr3.nnic@LRRFIP2	transcript1176.chr3.nnic	protein_coding	37176060,37174539,37148894,37129063,37127630,37121635,37121492,37115054,37112915,37110991,37109653,37109527,37108637,37108073,37105455,37096616,37094792,37091467,37083636,37075024,37072790,37066224,37065810,37063742,37058790,37055086,37054411,37053004	37176356,37174605,37149038,37129149,37127680,37121691,37121536,37115095,37112980,37111065,37109703,37109571,37108684,37108129,37105523,37096660,37094908,37091538,37083806,37075116,37072882,37066325,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 20.48 Transcript Type= NA
chr3	37053004	37176337	37053004	37176337	-	ENST00000421276.6@LRRFIP2	ENST00000421276.6	protein_coding	37176060,37174539,37148894,37129063,37096616,37094792,37091467,37083636,37075024,37065810,37063742,37058790,37055086,37054411,37053004	37176337,37174605,37149038,37129149,37096660,37094908,37091538,37083806,37075116,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 3.11 Transcript Type= protein_coding
chr3	37241789	37244177	37241789	37244177	-	ENST00000604992.1@AC097359.2	ENST00000604992.1	antisense_RNA	37241789	37244177	Gene ID= ENSG00000270194.1 TPM= 2.9 Transcript Type= antisense_RNA
chr3	37243221	37324750	37243221	37324750	+	transcript1253.chr3.nic@GOLGA4	transcript1253.chr3.nic	protein_coding	37243221,37251395,37266842,37273536,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588	37243622,37251484,37266940,37273601,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37324750	Gene ID= ENSG00000144674.16 TPM= 74.02 Transcript Type= NA
chr3	37243221	37324750	37243221	37324750	+	transcript1262.chr3.nic@GOLGA4	transcript1262.chr3.nic	protein_coding	37243221,37251395,37273536,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588	37243622,37251484,37273601,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37324750	Gene ID= ENSG00000144674.16 TPM= 26.72 Transcript Type= NA
chr3	37243177	37366751	37243177	37366751	+	ENST00000361924.6@GOLGA4	ENST00000361924.6	protein_coding	37243177,37251395,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337143,37337666,37340124,37347193,37355101,37361243,37366080	37243622,37251484,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337163,37337734,37340199,37347296,37355187,37361305,37366751	Gene ID= ENSG00000144674.16 TPM= 2.35 Transcript Type= protein_coding
chr3	37282183	37366750	37282183	37366750	+	ENST00000437131.1@GOLGA4	ENST00000437131.1	protein_coding	37282183,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337143,37337666,37340124,37347193,37355101,37366080	37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337163,37337734,37340199,37347296,37355187,37366750	Gene ID= ENSG00000144674.16 TPM= 7.31 Transcript Type= protein_coding
chr3	37243252	37366745	37243252	37366745	+	ENST00000356847.8@GOLGA4	ENST00000356847.8	protein_coding	37243252,37251395,37273536,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337666,37340124,37347193,37355101,37366080	37243622,37251484,37273601,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337734,37340199,37347296,37355187,37366745	Gene ID= ENSG00000144674.16 TPM= 12.33 Transcript Type= protein_coding
chr3	37452119	37823514	37452119	37823514	+	ENST00000264741.9@ITGA9	ENST00000264741.9	protein_coding	37452119,37471007,37473354,37481484,37494501,37503178,37506000,37508559,37513763,37517504,37519260,37523521,37526026,37533314,37542425,37629187,37653714,37683865,37732712,37736904,37741730,37743926,37750462,37777392,37779902,37784977,37803823,37818891	37452559,37471134,37473460,37481607,37494568,37503307,37506085,37508627,37513900,37517609,37519354,37523611,37526071,37533468,37542585,37629336,37653790,37684015,37732798,37736983,37741819,37744034,37750569,37777517,37780021,37785078,37803942,37823514	Gene ID= ENSG00000144668.11 TPM= 4.83 Transcript Type= protein_coding
chr3	38007498	38024787	38007498	38024787	-	ENST00000463876.5@PLCD1	ENST00000463876.5	protein_coding	38024337,38020188,38016491,38011544,38011214,38010361,38010131,38009904,38009653,38009272,38009042,38008458,38008235,38008014,38007498	38024787,38020352,38016719,38011673,38011445,38010562,38010275,38010053,38009811,38009431,38009158,38008636,38008367,38008163,38007858	Gene ID= ENSG00000187091.13 TPM= 2.9 Transcript Type= protein_coding
chr3	38119548	38137120	38119548	38137120	-	transcript1300.chr3.nnic@ACAA1	transcript1300.chr3.nnic	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126510,38126162,38125826,38125565,38122713,38119548	38137120,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38126341,38125881,38125710,38123122,38119555	Gene ID= ENSG00000060971.17 TPM= 4.99 Transcript Type= NA
chr3	38122710	38137208	38122710	38137208	-	ENST00000333167.12@ACAA1	ENST00000333167.12	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126510,38126162,38125826,38125565,38122710	38137208,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38126341,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 59.24 Transcript Type= protein_coding
chr3	38122711	38137133	38122711	38137133	-	transcript1302.chr3.nic@ACAA1	transcript1302.chr3.nic	protein_coding	38136865,38136592,38133952,38131926,38129290,38127786,38126510,38126162,38125826,38125565,38122711	38137133,38136685,38134009,38132005,38129388,38127866,38126700,38126341,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 3.25 Transcript Type= NA
chr3	38122711	38137080	38122711	38137080	-	transcript1304.chr3.nic@ACAA1	transcript1304.chr3.nic	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126162,38125826,38125565,38122711	38137080,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 3.25 Transcript Type= NA
chr3	38122711	38137192	38122711	38137192	-	transcript1305.chr3.nic@ACAA1	transcript1305.chr3.nic	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126510,38125826,38125565,38122711	38137192,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 3.25 Transcript Type= NA
chr3	38122710	38137242	38122710	38137242	-	ENST00000411549.5@ACAA1	ENST00000411549.5	protein_coding	38136865,38136592,38133952,38131926,38129290,38127786,38126162,38125826,38125565,38122710	38137242,38136685,38134009,38132005,38129388,38127866,38126700,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 1.32 Transcript Type= nonsense_mediated_decay
chr3	38165505	38255488	38165505	38255488	+	ENST00000311806.7@OXSR1	ENST00000311806.7	protein_coding	38165505,38183003,38190731,38198722,38216096,38221578,38223812,38224571,38229687,38230365,38236839,38242743,38246075,38247668,38249966,38251403,38252328,38252817	38165946,38183115,38190839,38198863,38216151,38221687,38223913,38224704,38229735,38230430,38236961,38242778,38246221,38247732,38250018,38251471,38252392,38255488	Gene ID= ENSG00000172939.8 TPM= 53.09 Transcript Type= protein_coding
chr3	38534374	38541415	38534374	38541415	+	transcript1326.chr3.nnic@NA	transcript1326.chr3.nnic	NA	38534374	38541415	Gene ID= novel_gene_chr3_1327 TPM= 1.93 Transcript Type= NA
chr3	39096665	39107630	39096665	39107630	-	transcript1340.chr3.nnic@GORASP1	transcript1340.chr3.nnic	protein_coding	39107479,39103473,39102678,39101016,39100788,39100305,39099353,39098741,39096665	39107630,39103553,39102881,39101102,39100877,39100454,39099503,39098893,39098489	Gene ID= ENSG00000114745.13 TPM= 6.44 Transcript Type= NA
chr3	39096659	39108363	39096659	39108363	-	ENST00000319283.7@GORASP1	ENST00000319283.7	protein_coding	39107479,39103473,39102678,39101016,39100747,39100305,39099353,39098741,39096659	39108363,39103553,39102881,39101102,39100877,39100503,39099503,39098893,39098489	Gene ID= ENSG00000114745.13 TPM= 34.43 Transcript Type= protein_coding
chr3	39096665	39107569	39096665	39107569	-	ENST00000453680.5@GORASP1	ENST00000453680.5	protein_coding	39107479,39103473,39102678,39101016,39100747,39100305,39099353,39098741,39096665	39107569,39103553,39102881,39101102,39100877,39100454,39099503,39098893,39098489	Gene ID= ENSG00000114745.13 TPM= 10.3 Transcript Type= nonsense_mediated_decay
chr3	39141855	39153575	39141855	39153575	-	ENST00000273153.9@CSRNP1	ENST00000273153.9	protein_coding	39153438,39146478,39144997,39144137,39141855	39153575,39146722,39145256,39144451,39144044	Gene ID= ENSG00000144655.14 TPM= 66.61 Transcript Type= protein_coding
chr3	39183210	39192761	39183210	39192761	-	transcript1363.chr3.nnic@XIRP1	transcript1363.chr3.nnic	protein_coding	39192446,39186089,39183210	39192761,39189449,39185661	Gene ID= ENSG00000168334.8 TPM= 141.42 Transcript Type= NA
chr3	39183210	39192596	39183210	39192596	-	ENST00000396251.1@XIRP1	ENST00000396251.1	protein_coding	39192446,39186089,39183210	39192596,39189525,39185661	Gene ID= ENSG00000168334.8 TPM= 1411.28 Transcript Type= protein_coding
chr3	39183216	39192595	39183216	39192595	-	ENST00000421646.1@XIRP1	ENST00000421646.1	protein_coding	39192446,39183216	39192595,39185661	Gene ID= ENSG00000168334.8 TPM= 1955.72 Transcript Type= protein_coding
chr3	39183215	39192594	39183215	39192594	-	ENST00000340369.3@XIRP1	ENST00000340369.3	protein_coding	39192446,39183215	39192594,39189525	Gene ID= ENSG00000168334.8 TPM= 240.36 Transcript Type= protein_coding
chr3	39382687	39384297	39382687	39384297	-	transcript1387.chr3.nnic@NA	transcript1387.chr3.nnic	NA	39382687	39384297	Gene ID= novel_gene_chr3_1388 TPM= 1.93 Transcript Type= NA
chr3	39383348	39397351	39383348	39397351	+	ENST00000273158.8@SLC25A38	ENST00000273158.8	protein_coding	39383348,39389495,39390423,39391441,39391853,39394410,39396398	39383793,39389616,39390507,39391620,39392021,39394576,39397351	Gene ID= ENSG00000144659.10 TPM= 8.69 Transcript Type= protein_coding
chr3	39406689	39412542	39406689	39412542	+	ENST00000301821.10@RPSA	ENST00000301821.10	protein_coding	39406689,39407621,39408606,39410754,39411649,39411896,39412274	39406764,39407786,39408724,39410999,39411777,39412061,39412542	Gene ID= ENSG00000168028.13 TPM= 336.41 Transcript Type= protein_coding
chr3	39406735	39412434	39406735	39412434	+	ENST00000443003.2@RPSA	ENST00000443003.2	protein_coding	39406735,39407621,39408606,39410754,39411649,39411896,39412274	39406764,39407786,39408739,39410999,39411777,39412061,39412434	Gene ID= ENSG00000168028.13 TPM= 339.79 Transcript Type= protein_coding
chr3	40309684	40312424	40309684	40312424	+	ENST00000232905.3@EIF1B	ENST00000232905.3	protein_coding	40309684,40310893,40311470,40311970	40309972,40311056,40311571,40312424	Gene ID= ENSG00000114784.3 TPM= 81.09 Transcript Type= protein_coding
chr3	40446343	40453329	40446343	40453329	-	ENST00000420850.1@ENTPD3-AS1	ENST00000420850.1	antisense_RNA	40453122,40451705,40446343	40453329,40451782,40446847	Gene ID= ENSG00000223797.5 TPM= 4.83 Transcript Type= antisense_RNA
chr3	40457292	40468587	40457292	40468587	+	ENST00000338970.10@RPL14	ENST00000338970.10	protein_coding	40457292,40457890,40458642,40461407,40461608,40461939	40457363,40457991,40458736,40461506,40461661,40468587	Gene ID= ENSG00000188846.13 TPM= 114.87 Transcript Type= protein_coding
chr3	40457340	40462368	40457340	40462368	+	ENST00000396203.6@RPL14	ENST00000396203.6	protein_coding	40457340,40457890,40458642,40461407,40461608,40461939	40457474,40457991,40458736,40461506,40461661,40462368	Gene ID= ENSG00000188846.13 TPM= 17.38 Transcript Type= protein_coding
chr3	40457354	40462280	40457354	40462280	+	ENST00000416518.1@RPL14	ENST00000416518.1	protein_coding	40457354,40457890,40458642,40461407,40461608,40461941	40457474,40457991,40458736,40461506,40461661,40462280	Gene ID= ENSG00000188846.13 TPM= 215.26 Transcript Type= protein_coding
chr3	40477160	40488433	40477160	40488433	+	transcript1409.chr3.nic@ZNF619	transcript1409.chr3.nic	protein_coding	40477160,40477918,40481863,40482588,40486806	40477357,40478003,40482016,40482704,40488433	Gene ID= ENSG00000177873.12 TPM= 3.86 Transcript Type= NA
chr3	40506039	40518736	40506039	40518736	+	ENST00000314529.10@ZNF620	ENST00000314529.10	protein_coding	40506039,40506304,40511470,40512402,40515860	40506138,40506376,40511596,40512515,40518736	Gene ID= ENSG00000177842.11 TPM= 1.93 Transcript Type= protein_coding
chr3	40524960	40576698	40524960	40576698	+	transcript1416.chr3.nnic@ZNF621	transcript1416.chr3.nnic	protein_coding	40524960,40525779,40529319,40530209,40574383,40576030	40525038,40525864,40529445,40530316,40574481,40576698	Gene ID= ENSG00000172888.11 TPM= 1.93 Transcript Type= NA
chr3	40524885	40537696	40524885	40537696	+	ENST00000339296.9@ZNF621	ENST00000339296.9	protein_coding	40524885,40525779,40529319,40530209,40532030	40525274,40525864,40529445,40530316,40537696	Gene ID= ENSG00000172888.11 TPM= 3.86 Transcript Type= protein_coding
chr3	41199434	41240443	41199434	41240443	+	ENST00000396183.7@CTNNB1	ENST00000396183.7	protein_coding	41199434,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134,41239819	41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41239354,41240443	Gene ID= ENSG00000168036.16 TPM= 42.79 Transcript Type= protein_coding
chr3	41199439	41240453	41199439	41240453	+	ENST00000349496.9@CTNNB1	ENST00000349496.9	protein_coding	41199439,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134	41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41240453	Gene ID= ENSG00000168036.16 TPM= 27.35 Transcript Type= protein_coding
chr3	41199505	41240443	41199505	41240443	+	ENST00000396185.7@CTNNB1	ENST00000396185.7	protein_coding	41199505,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134,41239660	41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41239354,41240443	Gene ID= ENSG00000168036.16 TPM= 6.11 Transcript Type= protein_coding
chr3	42013608	42204189	42013608	42204189	+	transcript1444.chr3.nic@TRAK1	transcript1444.chr3.nic	protein_coding	42013608,42087104,42125420,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436	42014117,42087400,42125614,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42204189	Gene ID= ENSG00000182606.14 TPM= 119.7 Transcript Type= NA
chr3	42547971	42582022	42547971	42582022	-	transcript1453.chr3.nnic@SEC22C	transcript1453.chr3.nnic	protein_coding	42581846,42568865,42563523,42561117,42560411,42557578,42555930,42547971	42582022,42569073,42563686,42561296,42560509,42557696,42555995,42548657	Gene ID= ENSG00000093183.13 TPM= 2.9 Transcript Type= NA
chr3	42547971	42582028	42547971	42582028	-	ENST00000273156.11@SEC22C	ENST00000273156.11	protein_coding	42581846,42568865,42563523,42561117,42557578,42555930,42547971	42582028,42569073,42563686,42561296,42557696,42555995,42548657	Gene ID= ENSG00000093183.13 TPM= 23.17 Transcript Type= protein_coding
chr3	42581840	42595114	42581840	42595114	+	ENST00000447630.5@SS18L2	ENST00000447630.5	protein_coding	42581840,42590809,42591525,42594422	42581958,42590966,42591601,42595114	Gene ID= ENSG00000008324.11 TPM= 11.58 Transcript Type= protein_coding
chr3	42590838	42594996	42590838	42594996	+	ENST00000011691.5@SS18L2	ENST00000011691.5	protein_coding	42590838,42591525,42594422	42590966,42591601,42594996	Gene ID= ENSG00000008324.11 TPM= 11.58 Transcript Type= protein_coding
chr3	42600655	42637000	42600655	42637000	+	transcript1470.chr3.nic@NKTR	transcript1470.chr3.nic	protein_coding	42600655,42600984,42617570,42619020,42619664,42620016,42621429,42627200,42630546,42631171,42632601,42633580,42634613,42635221,42636868	42600778,42601064,42617644,42619127,42619708,42620043,42621516,42627227,42630575,42631316,42632823,42633735,42634700,42635366,42637000	Gene ID= ENSG00000114857.17 TPM= 3.86 Transcript Type= NA
chr3	42600614	42648741	42600614	42648741	+	ENST00000232978.12@NKTR	ENST00000232978.12	protein_coding	42600614,42600984,42617570,42619020,42619664,42621429,42630546,42631171,42632601,42633580,42634613,42635221,42636868,42642501,42643339,42643902,42645888	42600778,42601064,42617644,42619127,42619708,42621516,42630575,42631316,42632823,42633735,42634700,42635366,42639750,42642596,42643395,42644003,42648741	Gene ID= ENSG00000114857.17 TPM= 6.27 Transcript Type= protein_coding
chr3	42600775	42637000	42600775	42637000	+	transcript1479.chr3.nic@NKTR	transcript1479.chr3.nic	protein_coding	42600775,42617570,42619020,42619664,42621429,42630546,42631171,42632601,42633580,42634613,42635221,42636868	42601064,42617644,42619127,42619708,42621516,42630575,42631316,42632823,42633735,42634700,42635366,42637000	Gene ID= ENSG00000114857.17 TPM= 1.93 Transcript Type= NA
chr3	42600682	42648735	42600682	42648735	+	ENST00000429888.5@NKTR	ENST00000429888.5	protein_coding	42600682,42600984,42617570,42619020,42619664,42620016,42621429,42627200,42630546,42631171,42632601,42633580,42634613,42635221,42636868,42642501,42643339,42643902,42645888	42600778,42601064,42617644,42619127,42619708,42620043,42621516,42627227,42630575,42631316,42632823,42633735,42634700,42635366,42639750,42642596,42643395,42644003,42648735	Gene ID= ENSG00000114857.17 TPM= 2.41 Transcript Type= nonsense_mediated_decay
chr3	42654204	42666150	42654204	42666150	+	transcript1483.chr3.nnic@ZBTB47	transcript1483.chr3.nnic	protein_coding	42654204,42658275,42661485,42663012,42663797,42664237	42654695,42659828,42661632,42663127,42663941,42666150	Gene ID= ENSG00000114853.13 TPM= 94.6 Transcript Type= NA
chr3	42667710	42683883	42667710	42683883	+	transcript1503.chr3.nnic@NA	transcript1503.chr3.nnic	NA	42667710,42670413,42682811	42669704,42670524,42683883	Gene ID= novel_gene_chr3_1504 TPM= 1.93 Transcript Type= NA
chr3	42685519	42692544	42685519	42692544	+	ENST00000287777.4@KLHL40	ENST00000287777.4	protein_coding	42685519,42688142,42688610,42688869,42690859,42691882	42686770,42688302,42688717,42689054,42691005,42692544	Gene ID= ENSG00000157119.11 TPM= 11.51 Transcript Type= protein_coding
chr3	42685447	42692426	42685447	42692426	+	transcript1582.chr3.nnic@KLHL40	transcript1582.chr3.nnic	protein_coding	42685447,42688142,42688869,42690859,42691882	42686770,42688302,42689054,42691005,42692426	Gene ID= ENSG00000157119.11 TPM= 141.96 Transcript Type= NA
chr3	42692031	42695051	42692031	42695051	+	transcript1594.chr3.nnic@NA	transcript1594.chr3.nnic	NA	42692031	42695051	Gene ID= novel_gene_chr3_1595 TPM= 57.92 Transcript Type= NA
chr3	42692663	42702796	42692663	42702796	-	transcript1589.chr3.nnic@HHATL	transcript1589.chr3.nnic	protein_coding	42702579,42696842,42693077,42692663	42702796,42696877,42693218,42692875	Gene ID= ENSG00000010282.14 TPM= 53.41 Transcript Type= NA
chr3	42692663	42702827	42692663	42702827	-	ENST00000441594.5@HHATL	ENST00000441594.5	protein_coding	42702579,42700721,42699758,42699032,42698708,42698142,42697508,42697001,42696842,42693617,42693077,42692663	42702827,42700839,42699825,42699145,42698902,42698351,42697679,42697145,42696877,42693818,42693218,42692875	Gene ID= ENSG00000010282.14 TPM= 204.05 Transcript Type= protein_coding
chr3	42692663	42701521	42692663	42701521	-	ENST00000310417.9@HHATL	ENST00000310417.9	protein_coding	42701467,42701112,42700721,42699758,42699032,42698708,42698142,42697508,42697001,42696842,42693617,42693077,42692663	42701521,42701190,42700839,42699825,42699145,42698902,42698351,42697679,42697145,42696877,42693818,42693218,42692875	Gene ID= ENSG00000010282.14 TPM= 18.71 Transcript Type= protein_coding
chr3	42696075	42699312	42696075	42699312	+	transcript1598.chr3.nnic@NA	transcript1598.chr3.nnic	NA	42696075	42699312	Gene ID= novel_gene_chr3_1599 TPM= 1.93 Transcript Type= NA
chr3	42784298	42804535	42784298	42804535	-	transcript1604.chr3.nnic@HIGD1A	transcript1604.chr3.nnic	protein_coding	42804436,42794157,42788622,42786028,42784298	42804535,42794275,42788881,42786162,42785320	Gene ID= ENSG00000181061.13 TPM= 10.62 Transcript Type= NA
chr3	42784298	42804531	42784298	42804531	-	ENST00000321331.11@HIGD1A	ENST00000321331.11	protein_coding	42804436,42794157,42786028,42784298	42804531,42794275,42786162,42785320	Gene ID= ENSG00000181061.13 TPM= 208.51 Transcript Type= protein_coding
chr3	42936360	42942792	42936360	42942792	+	ENST00000383748.8@KRBOX1	ENST00000383748.8	protein_coding	42936360,42938850,42941226,42941958,42942538	42936455,42938931,42941352,42942071,42942792	Gene ID= ENSG00000240747.7 TPM= 2.9 Transcript Type= protein_coding
chr3	43079234	43106076	43079234	43106076	-	ENST00000344697.2@POMGNT2	ENST00000344697.2	protein_coding	43105836,43079234	43106076,43081536	Gene ID= ENSG00000144647.5 TPM= 43.44 Transcript Type= protein_coding
chr3	43286612	43351138	43286612	43351138	+	transcript1622.chr3.nnic@SNRK	transcript1622.chr3.nnic	protein_coding	43286612,43289740,43303098,43332169,43340287,43343344,43347339	43286675,43289789,43303792,43332310,43340499,43343478,43351138	Gene ID= ENSG00000163788.13 TPM= 2.9 Transcript Type= NA
chr3	43286540	43351138	43286540	43351138	+	ENST00000296088.11@SNRK	ENST00000296088.11	protein_coding	43286540,43299754,43303098,43332169,43340287,43343344,43347339	43286675,43299815,43303792,43332310,43340499,43343478,43351138	Gene ID= ENSG00000163788.13 TPM= 5.79 Transcript Type= protein_coding
chr3	43286538	43351143	43286538	43351143	+	ENST00000429705.6@SNRK	ENST00000429705.6	protein_coding	43286538,43303098,43332169,43340287,43343344,43347339	43286675,43303792,43332310,43340499,43343478,43351143	Gene ID= ENSG00000163788.13 TPM= 7.72 Transcript Type= protein_coding
chr3	43365848	43622068	43365848	43622068	-	ENST00000292246.7@ANO10	ENST00000292246.7	protein_coding	43621909,43605714,43600384,43598532,43580353,43576692,43574809,43565653,43561220,43555278,43549720,43432611,43365848	43622068,43605863,43600581,43598666,43580472,43577261,43574864,43565727,43561402,43555469,43549848,43432727,43366974	Gene ID= ENSG00000160746.12 TPM= 14.48 Transcript Type= protein_coding
chr3	43366359	43621984	43366359	43621984	-	ENST00000396091.7@ANO10	ENST00000396091.7	protein_coding	43621909,43605714,43598532,43580353,43576692,43574809,43565653,43561220,43555278,43549720,43432611,43366359	43621984,43605863,43598666,43580472,43577261,43574864,43565727,43561402,43555469,43549848,43432727,43366974	Gene ID= ENSG00000160746.12 TPM= 6.76 Transcript Type= protein_coding
chr3	43690870	43719049	43690870	43719049	+	ENST00000458276.6@ABHD5	ENST00000458276.6	protein_coding	43690870,43699276,43702215,43711709,43714947,43717671,43718443	43691039,43699361,43702587,43711863,43715058,43717857,43719049	Gene ID= ENSG00000011198.7 TPM= 7.72 Transcript Type= protein_coding
chr3	43731080	43733440	43731080	43733440	+	transcript1652.chr3.nnic@NA	transcript1652.chr3.nnic	NA	43731080	43733440	Gene ID= novel_gene_chr3_1653 TPM= 1.93 Transcript Type= NA
chr3	44338119	44359804	44338119	44359804	+	ENST00000383746.7@TCAIM	ENST00000383746.7	protein_coding	44338119,44354739,44357741,44358217	44338319,44354811,44357876,44359804	Gene ID= ENSG00000179152.19 TPM= 3.38 Transcript Type= protein_coding
chr3	44338452	44359802	44338452	44359802	+	ENST00000396078.7@TCAIM	ENST00000396078.7	protein_coding	44338452,44354739,44357741,44358217	44338834,44354811,44357876,44359802	Gene ID= ENSG00000179152.19 TPM= 13.03 Transcript Type= protein_coding
chr3	44441640	44443679	44441640	44443679	-	transcript1663.chr3.nnic@NA	transcript1663.chr3.nnic	NA	44441640	44443679	Gene ID= novel_gene_chr3_1664 TPM= 4.83 Transcript Type= NA
chr3	44625049	44648471	44625049	44648471	+	ENST00000383745.6@ZNF197	ENST00000383745.6	protein_coding	44625049,44629065,44631062,44632105,44632473,44646491	44625143,44629544,44631221,44632196,44632599,44648471	Gene ID= ENSG00000186448.14 TPM= 4.83 Transcript Type= protein_coding
chr3	44648727	44660789	44648727	44660789	+	ENST00000396056.6@ZNF35	ENST00000396056.6	protein_coding	44648727,44650941,44652557,44658701	44648834,44651259,44652701,44660789	Gene ID= ENSG00000169981.10 TPM= 1.93 Transcript Type= protein_coding
chr3	44648742	44660791	44648742	44660791	+	ENST00000296092.7@ZNF35	ENST00000296092.7	protein_coding	44648742,44650941,44658701	44648834,44651259,44660791	Gene ID= ENSG00000169981.10 TPM= 7.72 Transcript Type= protein_coding
chr3	44661860	44665536	44661860	44665536	-	transcript1690.chr3.nnic@NA	transcript1690.chr3.nnic	NA	44661860	44665536	Gene ID= novel_gene_chr3_1691 TPM= 3.86 Transcript Type= NA
chr3	44712646	44723831	44712646	44723831	+	ENST00000296091.8@ZNF502	ENST00000296091.8	protein_coding	44712646,44714591,44720203,44720873	44712744,44714688,44720316,44723831	Gene ID= ENSG00000196653.11 TPM= 14.48 Transcript Type= protein_coding
chr3	44712646	44722977	44712646	44722977	+	ENST00000436624.6@ZNF502	ENST00000436624.6	protein_coding	44712646,44720203,44720873	44712740,44720316,44722977	Gene ID= ENSG00000196653.11 TPM= 1.93 Transcript Type= protein_coding
chr3	44729596	44737083	44729596	44737083	+	ENST00000396048.6@ZNF501	ENST00000396048.6	protein_coding	44729596,44731476,44734197	44729722,44731560,44737083	Gene ID= ENSG00000186446.11 TPM= 1.93 Transcript Type= protein_coding
chr3	44748744	44761662	44748744	44761662	-	ENST00000296121.5@KIAA1143	ENST00000296121.5	protein_coding	44761495,44754224,44748744	44761662,44754368,44753552	Gene ID= ENSG00000163807.5 TPM= 13.51 Transcript Type= protein_coding
chr3	44861889	44865670	44861889	44865670	+	transcript1705.chr3.nnic@TMEM42	transcript1705.chr3.nnic	protein_coding	44861889,44862358,44864197,44865040	44862015,44862527,44864343,44865670	Gene ID= ENSG00000169964.7 TPM= 3.21 Transcript Type= NA
chr3	44861869	44865670	44861869	44865670	+	ENST00000302392.4@TMEM42	ENST00000302392.4	protein_coding	44861869,44864197,44865040	44862116,44864343,44865670	Gene ID= ENSG00000169964.7 TPM= 7.08 Transcript Type= protein_coding
chr3	44861906	44865670	44861906	44865670	+	transcript1710.chr3.nnic@TMEM42	transcript1710.chr3.nnic	protein_coding	44861906,44864197,44865040	44862015,44864343,44865670	Gene ID= ENSG00000169964.7 TPM= 2.25 Transcript Type= NA
chr3	44925171	44976177	44925171	44976177	-	ENST00000424952.6@ZDHHC3	ENST00000424952.6	protein_coding	44975933,44959131,44945168,44933888,44933118,44929306,44925171	44976177,44959460,44945292,44933984,44933199,44929436,44926847	Gene ID= ENSG00000163812.13 TPM= 36.68 Transcript Type= protein_coding
chr3	44975214	45011470	44975214	45011470	+	transcript1715.chr3.nic@EXOSC7	transcript1715.chr3.nic	protein_coding	44975214,44989140,44989550,44997087,45001538,45005291,45007420,45011235	44975476,44989241,44989644,44997252,45001608,45005414,45007575,45011470	Gene ID= ENSG00000075914.12 TPM= 2.58 Transcript Type= NA
chr3	44976239	45011470	44976239	45011470	+	transcript1728.chr3.nic@EXOSC7	transcript1728.chr3.nic	protein_coding	44976239,44997087,45001538,45005291,45007420,45011235	44976334,44997252,45001608,45005414,45007575,45011470	Gene ID= ENSG00000075914.12 TPM= 2.58 Transcript Type= NA
chr3	44975241	45012666	44975241	45012666	+	ENST00000461361.5@EXOSC7	ENST00000461361.5	protein_coding	44975241,44989140,44989550,44997087,45001538,45005291,45007420,45011235,45012183	44975476,44989241,44989644,44997252,45001608,45005414,45007575,45011393,45012666	Gene ID= ENSG00000075914.12 TPM= 1.93 Transcript Type= processed_transcript
chr3	44976230	45011470	44976230	45011470	+	ENST00000265564.7@EXOSC7	ENST00000265564.7	protein_coding	44976230,44989140,44989550,44997087,45001538,45005291,45007420,45011235	44976334,44989241,44989644,44997252,45001608,45005414,45007575,45011470	Gene ID= ENSG00000075914.12 TPM= 57.6 Transcript Type= protein_coding
chr3	44976264	45012633	44976264	45012633	+	ENST00000491476.5@EXOSC7	ENST00000491476.5	protein_coding	44976264,44989140,44989550,44997087,45001538,45005291,45007420,45011235,45012183	44976334,44989241,44989644,44997252,45001608,45005414,45007575,45011393,45012633	Gene ID= ENSG00000075914.12 TPM= 11.58 Transcript Type= processed_transcript
chr3	45026183	45036071	45026183	45036071	+	ENST00000296130.4@CLEC3B	ENST00000296130.4	protein_coding	45026183,45030827,45035524	45026471,45030925,45036071	Gene ID= ENSG00000163815.5 TPM= 25.1 Transcript Type= protein_coding
chr3	45224466	45226278	45224466	45226278	-	ENST00000503771.1@TMEM158	ENST00000503771.1	protein_coding	45224466	45226278	Gene ID= ENSG00000249992.1 TPM= 1.93 Transcript Type= protein_coding
chr3	45388561	45549421	45388561	45549421	+	ENST00000415258.5@LARS2	ENST00000415258.5	protein_coding	45388561,45394433,45400245,45417482,45419669,45446891,45458743,45474243,45476468,45485692,45488697,45491517,45496275,45500442,45513135,45516094,45517903,45520219,45523997,45541829,45547351	45388680,45394687,45400373,45417573,45419729,45446980,45458886,45474350,45476627,45485796,45488812,45491800,45496373,45500579,45513235,45516276,45518072,45520296,45524108,45541956,45549421	Gene ID= ENSG00000011376.9 TPM= 1.93 Transcript Type= protein_coding
chr3	45388506	45548837	45388506	45548837	+	ENST00000265537.7@LARS2	ENST00000265537.7	protein_coding	45388506,45391583,45394433,45400245,45417482,45419669,45446891,45458743,45474243,45476468,45485692,45488697,45491517,45496275,45500442,45513135,45516094,45517903,45520219,45523997,45541829,45547351	45388680,45391648,45394687,45400373,45417573,45419729,45446980,45458886,45474350,45476627,45485796,45488812,45491800,45496373,45500579,45513235,45516276,45518072,45520296,45524108,45541956,45548837	Gene ID= ENSG00000011376.9 TPM= 23.17 Transcript Type= protein_coding
chr3	45594130	45676357	45594130	45676357	+	transcript1744.chr3.nic@LIMD1	transcript1744.chr3.nic	protein_coding	45594130,45636150,45665650,45668294,45672690,45673454,45674343	45596287,45636251,45665717,45668356,45672820,45673505,45676357	Gene ID= ENSG00000144791.9 TPM= 5.79 Transcript Type= NA
chr3	45689262	45745424	45689262	45745424	+	ENST00000389061.9@SACM1L	ENST00000389061.9	protein_coding	45689262,45703438,45705135,45706780,45709498,45713137,45714046,45719500,45722000,45722869,45723475,45731301,45732053,45735235,45737583,45737772,45738578,45738781,45739587,45743533	45689497,45703535,45705209,45706907,45709647,45713196,45714079,45719601,45722085,45722955,45723543,45731380,45732151,45735373,45737652,45737844,45738671,45738873,45739644,45745424	Gene ID= ENSG00000211456.10 TPM= 22.2 Transcript Type= protein_coding
chr3	45823316	45842166	45823316	45842166	-	ENST00000296135.10@LZTFL1	ENST00000296135.10	protein_coding	45841989,45837927,45835590,45834238,45833050,45831073,45830913,45828439,45827356,45823316	45842166,45838051,45835784,45834298,45833121,45831138,45830990,45828615,45827459,45826332	Gene ID= ENSG00000163818.16 TPM= 1.93 Transcript Type= protein_coding
chr3	45917904	45995815	45917904	45995815	-	ENST00000296137.6@FYCO1	ENST00000296137.6	protein_coding	45995722,45984856,45981570,45979705,45975239,45973088,45969675,45966277,45965033,45964336,45962225,45959393,45958408,45955249,45936448,45931071,45923656,45917904	45995815,45985022,45981676,45979830,45975345,45973231,45969765,45968703,45965125,45964454,45962392,45959542,45958619,45955393,45936543,45931281,45923765,45921840	Gene ID= ENSG00000163820.14 TPM= 71.43 Transcript Type= protein_coding
chr3	46436019	46463671	46436019	46463671	-	ENST00000426532.6@LTF	ENST00000426532.6	protein_coding	46463444,46459656,46456290,46455796,46455295,46454305,46450495,46449854,46448863,46447308,46446440,46445281,46443441,46441416,46439296,46437940,46436019	46463671,46459819,46456398,46455978,46455442,46454360,46450673,46450028,46449017,46447398,46446493,46445436,46443582,46441483,46439480,46438129,46436229	Gene ID= ENSG00000012223.12 TPM= 3.86 Transcript Type= protein_coding
chr3	46515423	46566550	46515423	46566550	-	ENST00000395905.7@LRRC2	ENST00000395905.7	protein_coding	46566177,46551467,46545046,46539045,46532773,46529905,46527426,46521522,46515423	46566550,46551610,46545253,46539201,46532909,46530050,46527581,46521658,46519063	Gene ID= ENSG00000163827.12 TPM= 59.85 Transcript Type= protein_coding
chr3	46531152	46566321	46531152	46566321	-	transcript1804.chr3.nic@LRRC2	transcript1804.chr3.nic	protein_coding	46566177,46551467,46545046,46539045,46531152	46566321,46551610,46545253,46539201,46532909	Gene ID= ENSG00000163827.12 TPM= 8.69 Transcript Type= NA
chr3	46670565	46693703	46670565	46693703	-	transcript1812.chr3.nnic@ALS2CL	transcript1812.chr3.nnic	protein_coding	46693643,46689338,46688098,46687619,46686983,46686308,46685525,46683989,46683782,46683130,46682029,46681500,46681246,46680430,46679210,46678259,46677180,46676849,46676642,46676245,46675618,46674566,46673339,46672140,46671884,46671488,46670565	46693703,46689465,46688296,46687684,46687148,46686439,46685644,46684047,46683848,46683326,46682094,46681598,46681407,46680541,46679287,46678389,46677265,46677022,46676738,46676402,46675686,46674739,46673381,46672201,46672033,46671584,46671064	Gene ID= ENSG00000178038.16 TPM= 3.86 Transcript Type= NA
chr3	46669189	46693701	46669189	46693701	-	ENST00000318962.8@ALS2CL	ENST00000318962.8	protein_coding	46693643,46689338,46688098,46687619,46686983,46686308,46685525,46683989,46683782,46683130,46682029,46681500,46681246,46680430,46679210,46678259,46676849,46676642,46676245,46675618,46674566,46673339,46672140,46671884,46671488,46669189	46693701,46689465,46688296,46687684,46687148,46686439,46685644,46684047,46683848,46683326,46682094,46681598,46681407,46680541,46679287,46678389,46677022,46676738,46676402,46675686,46674739,46673381,46672201,46672033,46671584,46671064	Gene ID= ENSG00000178038.16 TPM= 4.83 Transcript Type= protein_coding
chr3	46857872	46863483	46857872	46863483	-	ENST00000292327.4@MYL3	ENST00000292327.4	protein_coding	46863262,46860960,46860676,46859475,46858384,46858231,46857872	46863483,46860987,46860825,46859648,46858461,46858272,46858101	Gene ID= ENSG00000160808.9 TPM= 686.77 Transcript Type= protein_coding
chr3	46857872	46863442	46857872	46863442	-	ENST00000395869.5@MYL3	ENST00000395869.5	protein_coding	46863262,46860960,46860676,46859475,46858384,46857872	46863442,46860987,46860825,46859648,46858461,46858272	Gene ID= ENSG00000160808.9 TPM= 204.12 Transcript Type= protein_coding
chr3	46860079	46863443	46860079	46863443	-	transcript1845.chr3.nnic@NA	transcript1845.chr3.nnic	NA	46860079	46863443	Gene ID= novel_gene_chr3_1846 TPM= 10.62 Transcript Type= NA
chr3	46883357	46903794	46883357	46903794	+	ENST00000313049.9@PTH1R	ENST00000313049.9	protein_coding	46883357,46893907,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46901414,46901766,46902526,46902749,46903270	46883634,46894009,46895869,46897965,46898192,46898472,46898857,46899456,46901085,46901480,46901860,46902667,46902790,46903794	Gene ID= ENSG00000160801.13 TPM= 3.86 Transcript Type= protein_coding
chr3	46921731	46976769	46921731	46976769	-	transcript1860.chr3.nic@CCDC12	transcript1860.chr3.nic	protein_coding	46976637,46940998,46925456,46923607,46923329,46922236,46921731	46976769,46941065,46925535,46923668,46923363,46922312,46922139	Gene ID= ENSG00000160799.11 TPM= 27.03 Transcript Type= NA
chr3	46979683	47009703	46979683	47009703	+	ENST00000450053.7@NBEAL2	ENST00000450053.7	protein_coding	46979683,46988669,46988842,46989085,46989260,46989511,46991219,46991406,46991840,46992475,46993937,46994455,46995032,46995714,46995932,46996271,46996751,46996954,46997259,46997561,46998067,46998463,46998717,46998959,46999315,46999630,46999889,47001001,47001279,47001689,47001920,47002371,47002645,47002957,47003174,47003816,47004077,47004495,47004972,47005181,47005489,47005738,47005946,47006165,47006333,47007066,47007241,47007525,47007816,47008070,47008283,47008520,47008989,47009219	46979912,46988757,46988970,46989166,46989381,46989593,46991304,46991688,46991946,46992555,46994020,46994553,46995633,46995846,46996051,46996592,46996833,46997046,46997433,46997694,46998226,46998565,46998879,46999117,46999474,46999715,47000404,47001179,47001438,47001826,47002288,47002520,47002802,47003081,47003309,47003976,47004393,47004590,47005096,47005321,47005619,47005847,47006063,47006262,47006449,47007155,47007350,47007697,47007910,47008186,47008441,47008668,47009124,47009703	Gene ID= ENSG00000160796.16 TPM= 6.76 Transcript Type= protein_coding
chr3	47122446	47164120	47122446	47164120	-	transcript1867.chr3.nic@SETD2	transcript1867.chr3.nic	protein_coding	47163854,47126648,47122446	47164120,47126663,47124548	Gene ID= ENSG00000181555.20 TPM= 4.83 Transcript Type= NA
chr3	47164210	47169948	47164210	47169948	+	transcript1869.chr3.nic@KIF9-AS1	transcript1869.chr3.nic	antisense_RNA	47164210,47169169	47164597,47169948	Gene ID= ENSG00000227398.3 TPM= 1.93 Transcript Type= NA
chr3	47275228	47282766	47275228	47282766	-	ENST00000432493.5@KIF9	ENST00000432493.5	protein_coding	47282495,47277282,47275228	47282766,47277379,47275490	Gene ID= ENSG00000088727.12 TPM= 6.76 Transcript Type= protein_coding
chr3	47282611	47346816	47282611	47346816	+	transcript1878.chr3.nnic@KLHL18	transcript1878.chr3.nnic	protein_coding	47282611,47319653,47322568,47329951,47333157,47334683,47336520,47340572,47342719,47343555	47283094,47319783,47322708,47330149,47333317,47334819,47336757,47340676,47342830,47346816	Gene ID= ENSG00000114648.11 TPM= 5.79 Transcript Type= NA
chr3	47282946	47346816	47282946	47346816	+	ENST00000232766.5@KLHL18	ENST00000232766.5	protein_coding	47282946,47319653,47322568,47329951,47333157,47334683,47336535,47340572,47342719,47343555	47283094,47319783,47322708,47330149,47333317,47334819,47336757,47340676,47342830,47346816	Gene ID= ENSG00000114648.11 TPM= 18.34 Transcript Type= protein_coding
chr3	47282959	47287458	47282959	47287458	+	ENST00000483201.1@KLHL18	ENST00000483201.1	protein_coding	47282959,47287220	47283094,47287458	Gene ID= ENSG00000114648.11 TPM= 14.48 Transcript Type= processed_transcript
chr3	47410814	47413435	47410814	47413435	+	transcript1889.chr3.nic@PTPN23	transcript1889.chr3.nic	protein_coding	47410814,47411783,47412094,47412283,47412514,47412706	47411686,47411967,47412198,47412421,47412627,47413435	Gene ID= ENSG00000076201.14 TPM= 16.41 Transcript Type= NA
chr3	47410577	47413431	47410577	47413431	+	transcript1890.chr3.nic@PTPN23	transcript1890.chr3.nic	protein_coding	47410577,47411783,47412094,47412283,47412514	47411686,47411967,47412198,47412421,47413431	Gene ID= ENSG00000076201.14 TPM= 9.65 Transcript Type= NA
chr3	47413713	47476113	47413713	47476113	-	ENST00000265565.9@SCAP	ENST00000265565.9	protein_coding	47475799,47442872,47435008,47428513,47427447,47427157,47425997,47425485,47423933,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47415098,47414827,47414572,47414180,47413713	47476113,47443091,47435137,47428670,47427667,47427262,47426169,47425611,47424045,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417826,47417207,47415180,47414993,47414652,47414386,47414099	Gene ID= ENSG00000114650.18 TPM= 18.1 Transcript Type= protein_coding
chr3	47413713	47475858	47413713	47475858	-	transcript1895.chr3.nnic@SCAP	transcript1895.chr3.nnic	protein_coding	47475799,47442872,47435008,47428513,47427447,47427157,47425997,47425485,47423933,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417122,47415098,47414827,47414572,47414180,47413713	47475858,47443091,47435137,47428670,47427667,47427262,47426169,47425611,47424045,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417207,47415180,47414993,47414652,47414386,47414099	Gene ID= ENSG00000114650.18 TPM= 7.48 Transcript Type= NA
chr3	47413713	47475941	47413713	47475941	-	transcript1897.chr3.nnic@SCAP	transcript1897.chr3.nnic	protein_coding	47475799,47442872,47435008,47428513,47427447,47427157,47425997,47425485,47423933,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47414827,47414572,47414180,47413713	47475941,47443091,47435137,47428670,47427667,47427262,47426169,47425611,47424045,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417823,47417207,47414993,47414652,47414386,47414099	Gene ID= ENSG00000114650.18 TPM= 6.52 Transcript Type= NA
chr3	47413713	47475872	47413713	47475872	-	transcript1901.chr3.nic@SCAP	transcript1901.chr3.nic	protein_coding	47475799,47442872,47435008,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47415098,47414827,47414572,47414180,47413713	47475872,47443091,47435137,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417823,47417207,47415180,47414993,47414652,47414386,47414099	Gene ID= ENSG00000114650.18 TPM= 38.37 Transcript Type= NA
chr3	47472036	47473097	47472036	47473097	+	transcript1906.chr3.nnic@NA	transcript1906.chr3.nnic	NA	47472036	47473097	Gene ID= novel_gene_chr3_1907 TPM= 3.86 Transcript Type= NA
chr3	47495640	47513384	47495640	47513384	-	transcript1910.chr3.nic@ELP6	transcript1910.chr3.nic	protein_coding	47512992,47511148,47510184,47504330,47501650,47498286,47495640	47513384,47511226,47510254,47504448,47501851,47498432,47496197	Gene ID= ENSG00000163832.15 TPM= 9.17 Transcript Type= NA
chr3	47495640	47513761	47495640	47513761	-	ENST00000296149.8@ELP6	ENST00000296149.8	protein_coding	47513537,47511148,47510184,47504330,47501650,47498286,47495640	47513761,47511226,47510254,47504448,47501851,47498432,47496197	Gene ID= ENSG00000163832.15 TPM= 15.93 Transcript Type= protein_coding
chr3	47587232	47781912	47587232	47781912	-	transcript1918.chr3.nnic@SMARCC1	transcript1918.chr3.nnic	protein_coding	47781603,47772817,47752526,47746325,47745908,47738029,47736034,47729025,47721429,47720666,47714415,47710683,47706409,47701278,47693241,47689387,47686049,47680437,47678198,47676629,47675475,47670658,47662334,47661294,47638725,47636022,47635190,47622207,47610066,47590661,47587232	47781912,47772936,47752623,47746419,47745993,47738110,47736126,47729094,47721496,47720735,47714490,47710808,47706530,47701402,47693300,47689424,47686170,47680508,47678311,47676782,47675588,47670717,47662592,47661455,47638780,47636136,47635344,47622341,47610327,47590837,47588306	Gene ID= ENSG00000173473.10 TPM= 1.93 Transcript Type= NA
chr3	47585272	47781917	47585272	47781917	-	ENST00000254480.9@SMARCC1	ENST00000254480.9	protein_coding	47781603,47772817,47745908,47738029,47736034,47729025,47720666,47714415,47710683,47706409,47701278,47693241,47689387,47686049,47680437,47678198,47676629,47675475,47670658,47662334,47661294,47638725,47636022,47635190,47622207,47610066,47590661,47585272	47781917,47772936,47745993,47738110,47736126,47729094,47720735,47714490,47710808,47706530,47701402,47693300,47689424,47686170,47680508,47678311,47676782,47675588,47670717,47662592,47661455,47638780,47636136,47635344,47622341,47610327,47590837,47588306	Gene ID= ENSG00000173473.10 TPM= 2.9 Transcript Type= protein_coding
chr3	47802928	47850193	47802928	47850193	+	ENST00000445061.5@DHX30	ENST00000445061.5	protein_coding	47802928,47805326,47810657,47818022,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867	47803212,47805420,47810711,47818117,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850193	Gene ID= ENSG00000132153.14 TPM= 46.02 Transcript Type= protein_coding
chr3	47803134	47850192	47803134	47850192	+	ENST00000395745.6@DHX30	ENST00000395745.6	protein_coding	47803134,47805326,47810657,47818022,47819236,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867	47803212,47805420,47810711,47818117,47819264,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850192	Gene ID= ENSG00000132153.14 TPM= 30.57 Transcript Type= nonsense_mediated_decay
chr3	47825028	47850187	47825028	47850187	+	ENST00000457607.1@DHX30	ENST00000457607.1	protein_coding	47825028,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867	47825247,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850187	Gene ID= ENSG00000132153.14 TPM= 140.94 Transcript Type= protein_coding
chr3	47912109	48089295	47912109	48089295	-	transcript1947.chr3.nnic@MAP4	transcript1947.chr3.nnic	protein_coding	48088773,47998638,47987383,47977865,47940499,47928228,47921765,47918719,47915951,47914817,47912109	48089295,47998879,47987433,47977933,47940534,47928350,47921878,47918841,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 23 Transcript Type= NA
chr3	47912109	48016497	47912109	48016497	-	transcript1959.chr3.nic@MAP4	transcript1959.chr3.nic	protein_coding	48016334,47998638,47987383,47977865,47928228,47921765,47918719,47915951,47914817,47912109	48016497,47998879,47987433,47977933,47928350,47921878,47918841,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 118.81 Transcript Type= NA
chr3	47912109	48089295	47912109	48089295	-	transcript1961.chr3.nic@MAP4	transcript1961.chr3.nic	protein_coding	48088773,47998638,47987383,47977865,47928228,47921765,47918719,47915951,47914817,47912109	48089295,47998879,47987433,47977933,47928350,47921878,47918841,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 158.07 Transcript Type= NA
chr3	47912109	48016497	47912109	48016497	-	transcript1970.chr3.nic@MAP4	transcript1970.chr3.nic	protein_coding	48016334,47998638,47977865,47928228,47921765,47918719,47915951,47914817,47912109	48016497,47998879,47977933,47928350,47921878,47918841,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 95.57 Transcript Type= NA
chr3	47912109	48089295	47912109	48089295	-	transcript1971.chr3.nic@MAP4	transcript1971.chr3.nic	protein_coding	48088773,47998638,47977865,47928228,47921765,47918719,47915951,47914817,47912109	48089295,47998879,47977933,47928350,47921878,47918841,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 160.72 Transcript Type= NA
chr3	47912109	48088931	47912109	48088931	-	transcript1980.chr3.nnic@MAP4	transcript1980.chr3.nnic	protein_coding	48088773,47998638,47987383,47977865,47928228,47921765,47915951,47914817,47912109	48088931,47998879,47987433,47977933,47928350,47921878,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 29.7 Transcript Type= NA
chr3	47912109	48088942	47912109	48088942	-	transcript1993.chr3.nnic@MAP4	transcript1993.chr3.nnic	protein_coding	48088773,47998638,47977865,47928228,47921765,47915951,47914817,47912109	48088942,47998879,47977933,47928350,47921878,47917174,47914939,47912421	Gene ID= ENSG00000047849.21 TPM= 30.19 Transcript Type= NA
chr3	47850690	47909267	47850690	47909267	-	ENST00000429422.5@MAP4	ENST00000429422.5	protein_coding	47909038,47877417,47875685,47871917,47871227,47870813,47857431,47855248,47853163,47850690	47909267,47877523,47875900,47872100,47871286,47871105,47857512,47855360,47853352,47852938	Gene ID= ENSG00000047849.21 TPM= 704.19 Transcript Type= protein_coding
chr3	47851094	48088841	47851094	48088841	-	ENST00000426837.6@MAP4	ENST00000426837.6	protein_coding	48088773,47998638,47987383,47977865,47928228,47921765,47918719,47915951,47914817,47909038,47877417,47875685,47871917,47871227,47870813,47869214,47867246,47857431,47855248,47853163,47851094	48088841,47998879,47987433,47977933,47928350,47921878,47918841,47917174,47914939,47912421,47877523,47875900,47872100,47871286,47871105,47869327,47867338,47857512,47855360,47853352,47853039	Gene ID= ENSG00000047849.21 TPM= 191.61 Transcript Type= protein_coding
chr3	48157146	48188356	48157146	48188356	-	ENST00000302506.7@CDC25A	ENST00000302506.7	protein_coding	48187778,48186703,48184653,48183800,48182929,48180721,48177854,48177371,48174284,48167846,48165831,48165636,48164307,48159344,48157146	48188356,48186779,48184695,48183836,48183030,48180840,48177988,48177442,48174457,48167944,48165893,48165734,48164437,48159455,48159085	Gene ID= ENSG00000164045.11 TPM= 3.86 Transcript Type= protein_coding
chr3	48241100	48270987	48241100	48270987	+	ENST00000354698.7@ZNF589	ENST00000354698.7	protein_coding	48241100,48247625,48260813,48267915	48241214,48247677,48260939,48270987	Gene ID= ENSG00000164048.13 TPM= 3.86 Transcript Type= protein_coding
chr3	48432164	48440081	48432164	48440081	-	ENST00000447018.5@CCDC51	ENST00000447018.5	protein_coding	48439988,48434817,48433707,48432164	48440081,48435015,48433871,48433166	Gene ID= ENSG00000164051.13 TPM= 2.25 Transcript Type= protein_coding
chr3	48432170	48440142	48432170	48440142	-	transcript2045.chr3.nic@CCDC51	transcript2045.chr3.nic	protein_coding	48440096,48434817,48433707,48432170	48440142,48435136,48433871,48433166	Gene ID= ENSG00000164051.13 TPM= 5.15 Transcript Type= NA
chr3	48432170	48440065	48432170	48440065	-	ENST00000395694.6@CCDC51	ENST00000395694.6	protein_coding	48439988,48434817,48433707,48432170	48440065,48435136,48433871,48433166	Gene ID= ENSG00000164051.13 TPM= 4.18 Transcript Type= protein_coding
chr3	48440257	48444208	48440257	48444208	+	ENST00000438607.2@TMA7	ENST00000438607.2	protein_coding	48440257,48440403,48440541,48443848	48440312,48440458,48440628,48444208	Gene ID= ENSG00000232112.3 TPM= 119.73 Transcript Type= protein_coding
chr3	48440214	48444203	48440214	48444203	+	transcript2063.chr3.nic@TMA7	transcript2063.chr3.nic	protein_coding	48440214,48440403,48443848	48440312,48440628,48444203	Gene ID= ENSG00000232112.3 TPM= 8.23 Transcript Type= NA
chr3	48440284	48444203	48440284	48444203	+	ENST00000477624.1@TMA7	ENST00000477624.1	protein_coding	48440284,48440541,48443848	48440458,48440628,48444203	Gene ID= ENSG00000232112.3 TPM= 3.89 Transcript Type= retained_intron
chr3	48446733	48465655	48446733	48465655	+	ENST00000320211.8@ATRIP	ENST00000320211.8	protein_coding	48446733,48450037,48451729,48454300,48457259,48459359,48459787,48460110,48463745,48464041,48464582,48464831,48465487	48447092,48450170,48451899,48454418,48457416,48459454,48459916,48460799,48463881,48464132,48464662,48465083,48465655	Gene ID= ENSG00000164053.19 TPM= 11.1 Transcript Type= protein_coding
chr3	48446733	48465655	48446733	48465655	+	ENST00000346691.9@ATRIP	ENST00000346691.9	protein_coding	48446733,48450037,48451729,48454300,48457259,48459359,48459787,48460110,48463745,48464041,48464831,48465487	48447092,48450170,48451899,48454418,48457416,48459454,48459916,48460799,48463881,48464132,48465083,48465655	Gene ID= ENSG00000164053.19 TPM= 1.45 Transcript Type= protein_coding
chr3	48465836	48467645	48465836	48467645	+	transcript2066.chr3.nic@AC134772.2	transcript2066.chr3.nic	protein_coding	48465836,48466630	48466309,48467645	Gene ID= ENSG00000282827.2 TPM= 13.03 Transcript Type= NA
chr3	48466246	48467645	48466246	48467645	+	transcript2065.chr3.nic@TREX1	transcript2065.chr3.nic	protein_coding	48466246,48466630,48466740	48466309,48466641,48467645	Gene ID= ENSG00000213689.11 TPM= 3.38 Transcript Type= NA
chr3	48467798	48504431	48467798	48504431	-	ENST00000296444.6@SHISA5	ENST00000296444.6	protein_coding	48504019,48501137,48479177,48469728,48469361,48467798	48504431,48501293,48479257,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 19.31 Transcript Type= protein_coding
chr3	48467876	48473208	48467876	48473208	-	ENST00000426002.5@SHISA5	ENST00000426002.5	protein_coding	48473010,48469728,48469361,48467876	48473208,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 36.68 Transcript Type= protein_coding
chr3	48467911	48504129	48467911	48504129	-	ENST00000443308.6@SHISA5	ENST00000443308.6	protein_coding	48504019,48501158,48479177,48469728,48469361,48467911	48504129,48501293,48479257,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 16.41 Transcript Type= protein_coding
chr3	48599003	48610037	48599003	48610037	-	ENST00000203407.5@UQCRC1	ENST00000203407.5	protein_coding	48609552,48609162,48605770,48604651,48604233,48603564,48601352,48600975,48600680,48600482,48600063,48599635,48599003	48610037,48609302,48605856,48604780,48604431,48603643,48601467,48601118,48600840,48600567,48600151,48599710,48599192	Gene ID= ENSG00000010256.10 TPM= 1105.6 Transcript Type= protein_coding
chr3	48599002	48609646	48599002	48609646	-	transcript2077.chr3.nic@UQCRC1	transcript2077.chr3.nic	protein_coding	48609552,48609162,48604651,48604233,48603564,48601352,48600975,48600680,48600482,48600063,48599635,48599002	48609646,48609302,48604780,48604431,48603643,48601467,48601118,48600840,48600567,48600151,48599710,48599192	Gene ID= ENSG00000010256.10 TPM= 219.44 Transcript Type= NA
chr3	48625723	48635483	48625723	48635483	-	ENST00000420764.6@SLC26A6	ENST00000420764.6	protein_coding	48635371,48633477,48633251,48632974,48632245,48631880,48631649,48631224,48630993,48630607,48630438,48630062,48629872,48629642,48628622,48628434,48627946,48626876,48626631,48626218,48625723	48635483,48633635,48633390,48633084,48632396,48632044,48631801,48631306,48631140,48630720,48630515,48630157,48629978,48629711,48628714,48628541,48628038,48627052,48626685,48626354,48626000	Gene ID= ENSG00000225697.12 TPM= 6.27 Transcript Type= protein_coding
chr3	48625725	48635441	48625725	48635441	-	ENST00000395550.6@SLC26A6	ENST00000395550.6	protein_coding	48635371,48633477,48633251,48632974,48632245,48631880,48631649,48631224,48630993,48630607,48630438,48630062,48629872,48629642,48628622,48628434,48627946,48626876,48626631,48626218,48625725	48635441,48633635,48633390,48633084,48632396,48632044,48631801,48631306,48631140,48630720,48630515,48630157,48629978,48629711,48628714,48628541,48628038,48627055,48626685,48626354,48626000	Gene ID= ENSG00000225697.12 TPM= 3.38 Transcript Type= protein_coding
chr3	48673844	48685927	48673844	48685927	-	ENST00000294129.6@NCKIPSD	ENST00000294129.6	protein_coding	48685637,48682903,48682348,48682045,48681287,48680059,48679801,48679575,48679377,48679055,48678877,48678564,48673844	48685927,48683012,48682552,48682156,48681780,48680229,48679887,48679713,48679457,48679183,48678969,48678736,48674747	Gene ID= ENSG00000213672.7 TPM= 6.76 Transcript Type= protein_coding
chr3	48673844	48685884	48673844	48685884	-	ENST00000416649.6@NCKIPSD	ENST00000416649.6	protein_coding	48685637,48682903,48682348,48682045,48681287,48680059,48679801,48679575,48679377,48679055,48678877,48678564,48673844	48685884,48683012,48682552,48682135,48681780,48680229,48679887,48679713,48679457,48679183,48678969,48678736,48674747	Gene ID= ENSG00000213672.7 TPM= 4.83 Transcript Type= protein_coding
chr3	48688003	48717250	48688003	48717250	-	ENST00000328631.9@IP6K2	ENST00000328631.9	protein_coding	48717157,48695090,48692954,48691307,48689538,48688003	48717250,48695421,48693179,48691482,48689713,48688773	Gene ID= ENSG00000068745.14 TPM= 14.48 Transcript Type= protein_coding
chr3	48688003	48694279	48688003	48694279	-	transcript2109.chr3.nic@IP6K2	transcript2109.chr3.nic	protein_coding	48692954,48691307,48689538,48688003	48694279,48691482,48689713,48688773	Gene ID= ENSG00000068745.14 TPM= 3.86 Transcript Type= NA
chr3	48693453	48717278	48693453	48717278	-	ENST00000432678.6@IP6K2	ENST00000432678.6	protein_coding	48717157,48695090,48694459,48693453	48717278,48695421,48694525,48694240	Gene ID= ENSG00000068745.14 TPM= 1.93 Transcript Type= protein_coding
chr3	48693785	48717192	48693785	48717192	-	ENST00000449610.5@IP6K2	ENST00000449610.5	protein_coding	48717157,48693785	48717192,48695421	Gene ID= ENSG00000068745.14 TPM= 2.9 Transcript Type= protein_coding
chr3	48746579	48847846	48746579	48847846	-	ENST00000265563.12@PRKAR2A	ENST00000265563.12	protein_coding	48847335,48807649,48793997,48790544,48782986,48772955,48765248,48765004,48756379,48752176,48746579	48847846,48807684,48794049,48790627,48783092,48773108,48765349,48765078,48756444,48752317,48751718	Gene ID= ENSG00000114302.15 TPM= 13.51 Transcript Type= protein_coding
chr3	48856925	48898913	48856925	48898913	-	transcript2140.chr3.nnic@SLC25A20	transcript2140.chr3.nnic	protein_coding	48898690,48891980,48883997,48879358,48862542,48856925	48898913,48892072,48884124,48879448,48862659,48857772	Gene ID= ENSG00000178537.9 TPM= 2.9 Transcript Type= NA
chr3	48918841	48983620	48918841	48983620	+	transcript2149.chr3.nic@ARIH2	transcript2149.chr3.nic	protein_coding	48918841,48922748,48924718,48927462,48945136,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48922811,48924839,48927813,48945181,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48983620	Gene ID= ENSG00000177479.19 TPM= 8.69 Transcript Type= NA
chr3	48918823	48935699	48918823	48935699	+	transcript2239.chr3.nnic@ARIH2	transcript2239.chr3.nnic	protein_coding	48918823,48922748,48924718,48927462,48933566	48918998,48922811,48924839,48927813,48935699	Gene ID= ENSG00000177479.19 TPM= 11.58 Transcript Type= NA
chr3	48918842	48928668	48918842	48928668	+	transcript2250.chr3.nic@ARIH2	transcript2250.chr3.nic	protein_coding	48918842,48922748,48924718,48927462	48918998,48922811,48924839,48928668	Gene ID= ENSG00000177479.19 TPM= 11.1 Transcript Type= NA
chr3	48918836	48983620	48918836	48983620	+	ENST00000449376.5@ARIH2	ENST00000449376.5	protein_coding	48918836,48922748,48924718,48927462,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48922811,48924839,48927813,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48983620	Gene ID= ENSG00000177479.19 TPM= 105.22 Transcript Type= protein_coding
chr3	48989886	49007154	48989886	49007154	+	ENST00000383729.8@P4HTM	ENST00000383729.8	protein_coding	48989886,48990833,49001438,49002500,49004098,49004861,49005777,49006064,49006687	48990610,48990914,49001628,49002596,49004260,49005046,49005867,49006187,49007154	Gene ID= ENSG00000178467.17 TPM= 40.54 Transcript Type= protein_coding
chr3	48989889	49007115	48989889	49007115	+	ENST00000343546.8@P4HTM	ENST00000343546.8	protein_coding	48989889,48990833,49001438,49002500,49004098,49004861,49005718,49006064,49006687	48990610,48990914,49001628,49002596,49004260,49005170,49005867,49006187,49007115	Gene ID= ENSG00000178467.17 TPM= 3.86 Transcript Type= protein_coding
chr3	49007424	49015953	49007424	49015953	+	transcript2253.chr3.nic@WDR6	transcript2253.chr3.nic	protein_coding	49007424,49011635,49014600,49014825	49007531,49014499,49014718,49015953	Gene ID= ENSG00000178252.17 TPM= 12.55 Transcript Type= NA
chr3	49015488	49018571	49015488	49018571	-	ENST00000341949.8@DALRD3	ENST00000341949.8	protein_coding	49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015488	49018571,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016086,49015872,49015707	Gene ID= ENSG00000178149.16 TPM= 11.58 Transcript Type= protein_coding
chr3	49015488	49018564	49015488	49018564	-	ENST00000441576.6@DALRD3	ENST00000441576.6	protein_coding	49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015488	49018564,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016060,49015872,49015707	Gene ID= ENSG00000178149.16 TPM= 2.9 Transcript Type= protein_coding
chr3	49021011	49023495	49021011	49023495	+	ENST00000326925.10@NDUFAF3	ENST00000326925.10	protein_coding	49021011,49022346,49022702,49022876,49023056	49022221,49022538,49022768,49022976,49023495	Gene ID= ENSG00000178057.14 TPM= 209.47 Transcript Type= protein_coding
chr3	49021605	49023288	49021605	49023288	+	ENST00000451378.2@NDUFAF3	ENST00000451378.2	protein_coding	49021605,49022346,49022702,49022876,49023056	49021784,49022538,49022768,49022976,49023288	Gene ID= ENSG00000178057.14 TPM= 7.24 Transcript Type= protein_coding
chr3	49022113	49023287	49022113	49023287	+	ENST00000496152.1@NDUFAF3	ENST00000496152.1	protein_coding	49022113,49022702,49022876,49023056	49022538,49022768,49022976,49023287	Gene ID= ENSG00000178057.14 TPM= 2.41 Transcript Type= retained_intron
chr3	49024325	49029444	49024325	49029444	-	transcript2186.chr3.nic@IMPDH2	transcript2186.chr3.nic	protein_coding	49029253,49028758,49028431,49028248,49027710,49026960,49026687,49026519,49026324,49025995,49025126,49024896,49024659,49024495,49024325	49029444,49028806,49028532,49028322,49027916,49027047,49026886,49026609,49026419,49026066,49025269,49025040,49024802,49024578,49024404	Gene ID= ENSG00000178035.11 TPM= 245.27 Transcript Type= NA
chr3	49024325	49029390	49024325	49029390	-	ENST00000326739.8@IMPDH2	ENST00000326739.8	protein_coding	49029253,49028758,49028431,49028248,49027710,49026960,49026687,49026519,49026324,49025126,49024896,49024659,49024495,49024325	49029390,49028806,49028532,49028322,49027916,49027047,49026886,49026609,49026419,49025269,49025040,49024802,49024578,49024404	Gene ID= ENSG00000178035.11 TPM= 164.9 Transcript Type= protein_coding
chr3	49024325	49028473	49024325	49028473	-	ENST00000429182.5@IMPDH2	ENST00000429182.5	protein_coding	49028431,49028248,49027710,49026960,49026687,49026519,49026324,49025995,49025126,49024896,49024659,49024495,49024325	49028473,49028322,49027916,49027047,49026886,49026609,49026419,49026066,49025269,49025040,49024802,49024578,49024404	Gene ID= ENSG00000178035.11 TPM= 46.17 Transcript Type= protein_coding
chr3	49029707	49094363	49029707	49094363	-	ENST00000395443.6@QRICH1	ENST00000395443.6	protein_coding	49093912,49076709,49056862,49047069,49046425,49044390,49033120,49032622,49032183,49029707	49094363,49077038,49057890,49047246,49046579,49044504,49033228,49032773,49032273,49030644	Gene ID= ENSG00000198218.10 TPM= 26.06 Transcript Type= protein_coding
chr3	49095932	49105135	49095932	49105135	-	ENST00000306125.11@QARS	ENST00000306125.11	protein_coding	49104617,49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095932	49105135,49104471,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079	Gene ID= ENSG00000172053.17 TPM= 112.49 Transcript Type= protein_coding
chr3	49095937	49104796	49095937	49104796	-	transcript2267.chr3.nic@QARS	transcript2267.chr3.nic	protein_coding	49104617,49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095937	49104796,49104471,49104098,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079	Gene ID= ENSG00000172053.17 TPM= 12.1 Transcript Type= NA
chr3	49095939	49104532	49095939	49104532	-	ENST00000464962.6@QARS	ENST00000464962.6	protein_coding	49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095939	49104532,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079	Gene ID= ENSG00000172053.17 TPM= 12.82 Transcript Type= protein_coding
chr3	49095933	49104420	49095933	49104420	-	ENST00000636669.1@QARS	ENST00000636669.1	protein_coding	49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49097134,49095933	49104420,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49097287,49096079	Gene ID= ENSG00000172053.17 TPM= 1.1 Transcript Type= nonsense_mediated_decay
chr3	49108050	49120932	49108050	49120932	-	transcript2285.chr3.nic@USP19	transcript2285.chr3.nic	protein_coding	49120756,49119022,49117947,49117657,49117437,49117059,49116727,49116451,49116280,49116047,49115724,49115444,49115228,49114959,49114763,49114174,49113992,49112489,49112284,49111911,49111500,49111255,49110950,49110711,49110444,49110184,49108050	49120932,49119281,49118120,49117785,49117570,49117361,49116943,49116607,49116351,49116162,49115944,49115639,49115361,49115117,49114873,49114284,49114093,49112629,49112402,49112048,49111813,49111365,49111166,49110863,49110604,49110362,49108528	Gene ID= ENSG00000172046.18 TPM= 25.1 Transcript Type= NA
chr3	49108675	49120938	49108675	49120938	-	ENST00000398888.6@USP19	ENST00000398888.6	protein_coding	49120756,49119022,49117947,49117657,49117437,49116727,49116451,49116280,49116047,49115724,49115444,49115228,49114959,49114763,49114174,49113992,49112489,49112284,49111911,49111500,49111255,49110950,49110711,49110444,49110184,49108675	49120938,49119281,49118120,49117830,49117570,49116943,49116607,49116351,49116162,49115938,49115639,49115361,49115117,49114873,49114284,49114093,49112629,49112402,49112048,49111813,49111365,49111166,49110863,49110604,49110362,49109185	Gene ID= ENSG00000172046.18 TPM= 20.27 Transcript Type= protein_coding
chr3	49108050	49120808	49108050	49120808	-	ENST00000417901.5@USP19	ENST00000417901.5	protein_coding	49120756,49119022,49117947,49117657,49117437,49117059,49116727,49116451,49116280,49116047,49115724,49115444,49115228,49114959,49114763,49114174,49113992,49112489,49112284,49111911,49111500,49111255,49110950,49110711,49110444,49110184,49108050	49120808,49119281,49118120,49117830,49117570,49117361,49116943,49116607,49116351,49116162,49115944,49115639,49115361,49115117,49114873,49114284,49114093,49112629,49112402,49112048,49111813,49111365,49111166,49110863,49110604,49110362,49108528	Gene ID= ENSG00000172046.18 TPM= 53.09 Transcript Type= protein_coding
chr3	49121114	49133118	49121114	49133118	-	ENST00000418109.5@LAMB2	ENST00000418109.5	protein_coding	49132955,49132792,49132491,49132270,49132116,49131535,49131379,49130950,49130740,49130231,49129839,49129604,49129245,49129020,49128661,49128458,49126365,49125967,49125747,49125253,49125006,49124701,49124395,49124190,49123728,49123447,49123132,49122704,49122163,49121944,49121684,49121433,49121114	49133118,49132868,49132663,49132405,49132189,49131723,49131442,49131152,49130860,49130419,49130018,49129716,49129324,49129152,49128819,49128585,49126497,49126159,49125890,49125484,49125169,49124925,49124612,49124286,49124100,49123631,49123373,49123052,49122370,49122085,49121860,49121592,49121362	Gene ID= ENSG00000172037.13 TPM= 145.28 Transcript Type= protein_coding
chr3	49121133	49133020	49121133	49133020	-	ENST00000305544.8@LAMB2	ENST00000305544.8	protein_coding	49132792,49132491,49132270,49132116,49131535,49131379,49130950,49130740,49130231,49129839,49129604,49129245,49129020,49128661,49128458,49126365,49125967,49125747,49125253,49125006,49124701,49124395,49124190,49123728,49123447,49123132,49122704,49122163,49121944,49121684,49121433,49121133	49133020,49132663,49132405,49132189,49131723,49131442,49131152,49130860,49130419,49130018,49129716,49129324,49129152,49128819,49128585,49126497,49126159,49125890,49125484,49125169,49124925,49124612,49124286,49124100,49123631,49123373,49123052,49122370,49122085,49121860,49121592,49121362	Gene ID= ENSG00000172037.13 TPM= 41.03 Transcript Type= protein_coding
chr3	49171546	49176486	49171546	49176486	+	transcript2295.chr3.nic@KLHDC8B	transcript2295.chr3.nic	protein_coding	49171546,49172636,49174239,49174742,49175062,49175605	49171685,49172801,49174403,49174966,49175163,49176486	Gene ID= ENSG00000185909.14 TPM= 1.93 Transcript Type= NA
chr3	49171613	49176486	49171613	49176486	+	transcript2296.chr3.nnic@KLHDC8B	transcript2296.chr3.nnic	protein_coding	49171613,49172636,49174239,49174721,49175062,49175605	49171685,49173145,49174403,49174966,49175163,49176486	Gene ID= ENSG00000185909.14 TPM= 1.93 Transcript Type= NA
chr3	49171625	49176486	49171625	49176486	+	transcript2299.chr3.nnic@KLHDC8B	transcript2299.chr3.nnic	protein_coding	49171625,49172636,49174239,49175605	49171685,49173145,49174403,49176486	Gene ID= ENSG00000185909.14 TPM= 1.93 Transcript Type= NA
chr3	49171611	49176486	49171611	49176486	+	ENST00000332780.3@KLHDC8B	ENST00000332780.3	protein_coding	49171611,49172636,49174239,49174742,49175062,49175605	49171685,49173145,49174403,49174966,49175163,49176486	Gene ID= ENSG00000185909.14 TPM= 43.44 Transcript Type= protein_coding
chr3	49199483	49258104	49199483	49258104	+	transcript2301.chr3.nnic@CCDC36	transcript2301.chr3.nnic	protein_coding	49199483,49207437,49211766,49236548,49241226,49244404,49244646,49255390,49256134	49199573,49207531,49211836,49236722,49241389,49244452,49244733,49255493,49258104	Gene ID= ENSG00000173421.16 TPM= 1.93 Transcript Type= NA
chr3	49278143	49340093	49278143	49340093	-	transcript2306.chr3.nnic@USP4	transcript2306.chr3.nnic	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49311514,49311281,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278814,49278143	49340093,49335596,49327816,49325845,49325039,49324763,49311654,49311358,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278902,49278451	Gene ID= ENSG00000114316.12 TPM= 1.93 Transcript Type= NA
chr3	49278170	49340093	49278170	49340093	-	transcript2316.chr3.nic@USP4	transcript2316.chr3.nic	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49311514,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278170	49340093,49335596,49327816,49325845,49325039,49324763,49311654,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278451	Gene ID= ENSG00000114316.12 TPM= 4.83 Transcript Type= NA
chr3	49323993	49340093	49323993	49340093	-	transcript2324.chr3.nic@USP4	transcript2324.chr3.nic	protein_coding	49339924,49335469,49327686,49325719,49324894,49323993	49340093,49335596,49327816,49325845,49325039,49324763	Gene ID= ENSG00000114316.12 TPM= 1.93 Transcript Type= NA
chr3	49278106	49340071	49278106	49340071	-	ENST00000265560.8@USP4	ENST00000265560.8	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49311514,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278814,49278106	49340071,49335596,49327816,49325845,49325039,49324763,49311654,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278902,49278451	Gene ID= ENSG00000114316.12 TPM= 17.38 Transcript Type= protein_coding
chr3	49357178	49358283	49357178	49358283	-	ENST00000419349.1@GPX1	ENST00000419349.1	protein_coding	49357178	49358283	Gene ID= ENSG00000233276.3 TPM= 31.86 Transcript Type= protein_coding
chr3	49359145	49412202	49359145	49412202	-	ENST00000418115.5@RHOA	ENST00000418115.5	protein_coding	49411820,49375434,49368428,49362496,49359145	49412202,49375591,49368548,49362626,49360382	Gene ID= ENSG00000067560.10 TPM= 273.5 Transcript Type= protein_coding
chr3	49412206	49416475	49412206	49416475	+	ENST00000273590.3@TCTA	ENST00000273590.3	protein_coding	49412206,49413056,49414820	49412640,49413110,49416475	Gene ID= ENSG00000145022.4 TPM= 32.82 Transcript Type= protein_coding
chr3	49416775	49422753	49416775	49422753	-	ENST00000273588.8@AMT	ENST00000273588.8	protein_coding	49422361,49422104,49421492,49420211,49419710,49419260,49418971,49417818,49416775	49422753,49422271,49421572,49420342,49419788,49419405,49419151,49417973,49417718	Gene ID= ENSG00000145020.15 TPM= 1.93 Transcript Type= protein_coding
chr3	49470132	49535615	49470132	49535615	+	ENST00000308775.6@DAG1	ENST00000308775.6	protein_coding	49470132,49510419,49530797	49470433,49510819,49535615	Gene ID= ENSG00000173402.11 TPM= 137.07 Transcript Type= protein_coding
chr3	49473885	49475104	49473885	49475104	-	transcript2355.chr3.nnic@NA	transcript2355.chr3.nnic	NA	49473885	49475104	Gene ID= novel_gene_chr3_2356 TPM= 5.79 Transcript Type= NA
chr3	49673972	49683500	49673972	49683500	+	transcript2364.chr3.nic@APEH	transcript2364.chr3.nic	protein_coding	49673972,49674489,49675183,49675694,49675891,49676056,49676609,49676777,49676903,49677573,49678852,49679593,49680541,49681101,49681722,49681887,49682348,49682546,49682843,49683040,49683237	49674413,49674621,49675309,49675787,49675966,49676219,49676700,49676817,49677024,49677633,49678949,49679644,49680629,49681239,49681805,49681967,49682436,49682736,49682945,49683146,49683500	Gene ID= ENSG00000164062.12 TPM= 14.07 Transcript Type= NA
chr3	49674362	49683500	49674362	49683500	+	transcript2365.chr3.nic@APEH	transcript2365.chr3.nic	protein_coding	49674362,49674489,49675694,49675891,49676056,49676378,49676609,49676777,49676903,49677573,49678852,49679593,49680541,49681101,49681722,49681887,49682348,49682546,49682843,49683040,49683237	49674413,49674621,49675787,49675966,49676219,49676515,49676700,49676817,49677024,49677633,49678949,49679644,49680629,49681239,49681805,49681967,49682436,49682736,49682945,49683146,49683500	Gene ID= ENSG00000164062.12 TPM= 17.69 Transcript Type= NA
chr3	49674351	49683500	49674351	49683500	+	transcript2371.chr3.nic@APEH	transcript2371.chr3.nic	protein_coding	49674351,49675694,49675891,49676056,49676378,49676609,49676777,49676903,49677573,49678852,49679593,49680541,49681101,49681722,49681887,49682348,49682546,49682843,49683040,49683237	49674413,49675787,49675966,49676219,49676515,49676700,49676817,49677024,49677633,49678949,49679644,49680629,49681239,49681805,49681967,49682436,49682736,49682945,49683146,49683500	Gene ID= ENSG00000164062.12 TPM= 18.66 Transcript Type= NA
chr3	49674002	49683963	49674002	49683963	+	ENST00000296456.9@APEH	ENST00000296456.9	protein_coding	49674002,49674489,49675183,49675694,49675891,49676056,49676378,49676609,49676777,49676903,49677573,49678852,49679593,49680541,49681101,49681722,49681887,49682348,49682546,49682843,49683040,49683237	49674413,49674621,49675309,49675787,49675966,49676219,49676515,49676700,49676817,49677024,49677633,49678949,49679644,49680629,49681239,49681805,49681967,49682436,49682736,49682945,49683146,49683963	Gene ID= ENSG00000164062.12 TPM= 5.07 Transcript Type= protein_coding
chr3	49683947	49689053	49683947	49689053	-	ENST00000449682.2@MST1	ENST00000449682.2	protein_coding	49688598,49687750,49687556,49687364,49687149,49686947,49686684,49686313,49686062,49685860,49685596,49685471,49685262,49685012,49684738,49684550,49684314,49683947	49689053,49687897,49687668,49687478,49687285,49687067,49686802,49686481,49686192,49685962,49685732,49685506,49685382,49685089,49684884,49684656,49684453,49684189	Gene ID= ENSG00000173531.15 TPM= 1.93 Transcript Type= protein_coding
chr3	49689499	49721527	49689499	49721527	+	ENST00000327697.10@RNF123	ENST00000327697.10	protein_coding	49689499,49691130,49691425,49697143,49697363,49697885,49698052,49698440,49698755,49698980,49699468,49699668,49700227,49700472,49700636,49701491,49701811,49702083,49702334,49702633,49703427,49704650,49704984,49705534,49705982,49706791,49712479,49713513,49713738,49713910,49714090,49715575,49715822,49716102,49716393,49720511,49720800,49721020,49721185	49689606,49691247,49691509,49697222,49697457,49697939,49698137,49698526,49698822,49699105,49699582,49699772,49700352,49700564,49700709,49701608,49701910,49702144,49702405,49702753,49703528,49704756,49705182,49705679,49706065,49706898,49712656,49713587,49713825,49713997,49714174,49715714,49716010,49716177,49716477,49720653,49720894,49721105,49721527	Gene ID= ENSG00000164068.15 TPM= 91.87 Transcript Type= protein_coding
chr3	49689586	49721529	49689586	49721529	+	transcript2388.chr3.nic@RNF123	transcript2388.chr3.nic	protein_coding	49689586,49691130,49691425,49697143,49697363,49697885,49698052,49698440,49698755,49698980,49699468,49699668,49700227,49700472,49700636,49701491,49701811,49702083,49702334,49702633,49703427,49704650,49704984,49705534,49705982,49706791,49712479,49713513,49713738,49713910,49714090,49715575,49715822,49716102,49716393,49720511,49720800,49721020,49721185	49689822,49691247,49691509,49697222,49697457,49697939,49698137,49698526,49698822,49699105,49699582,49699772,49700352,49700564,49700709,49701608,49701910,49702144,49702405,49702753,49703528,49704756,49705182,49705679,49706065,49706898,49712656,49713587,49713825,49713997,49714174,49715714,49716010,49716177,49716477,49720653,49720894,49721105,49721529	Gene ID= ENSG00000164068.15 TPM= 37.97 Transcript Type= NA
chr3	49693349	49696684	49693349	49696684	-	transcript2413.chr3.nnic@NA	transcript2413.chr3.nnic	NA	49693349	49696684	Gene ID= novel_gene_chr3_2414 TPM= 3.86 Transcript Type= NA
chr3	49721476	49723984	49721476	49723984	-	transcript2400.chr3.nnic@GMPPB	transcript2400.chr3.nnic	protein_coding	49723598,49723392,49723254,49722972,49722596,49722432,49721965,49721476	49723984,49723472,49723302,49723114,49722754,49722510,49722147,49721883	Gene ID= ENSG00000173540.12 TPM= 1.93 Transcript Type= NA
chr3	49719909	49723984	49719909	49723984	-	transcript2409.chr3.nic@GMPPB	transcript2409.chr3.nic	protein_coding	49723598,49723392,49723254,49719909	49723984,49723472,49723302,49723114	Gene ID= ENSG00000173540.12 TPM= 2.9 Transcript Type= NA
chr3	49721476	49723949	49721476	49723949	-	ENST00000308388.6@GMPPB	ENST00000308388.6	protein_coding	49723598,49723392,49723254,49722972,49722596,49722432,49722231,49721965,49721476	49723949,49723472,49723302,49723114,49722754,49722510,49722358,49722147,49721883	Gene ID= ENSG00000173540.12 TPM= 35.72 Transcript Type= protein_coding
chr3	49717926	49720331	49717926	49720331	+	transcript2411.chr3.nnic@NA	transcript2411.chr3.nnic	NA	49717926	49720331	Gene ID= novel_gene_chr3_2412 TPM= 3.86 Transcript Type= NA
chr3	49724294	49786527	49724294	49786527	-	ENST00000321599.8@IP6K1	ENST00000321599.8	protein_coding	49786354,49747818,49738212,49732791,49728103,49724294	49786527,49748168,49738422,49732972,49728278,49727655	Gene ID= ENSG00000176095.11 TPM= 19.31 Transcript Type= protein_coding
chr3	49803254	49805030	49803254	49805030	+	ENST00000333323.4@FAM212A	ENST00000333323.4	protein_coding	49803254,49804181	49803443,49805030	Gene ID= ENSG00000185614.4 TPM= 1.93 Transcript Type= protein_coding
chr3	49805207	49813946	49805207	49813946	-	ENST00000333486.3@UBA7	ENST00000333486.3	protein_coding	49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49811273,49810984,49810752,49810517,49810263,49809978,49809815,49809542,49809390,49808976,49808386,49808020,49807736,49806073,49805897,49805207	49813946,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49811091,49810832,49810672,49810428,49810183,49809879,49809725,49809464,49809159,49808468,49808112,49807927,49806165,49805997,49805437	Gene ID= ENSG00000182179.12 TPM= 2.9 Transcript Type= protein_coding
chr3	49828599	49856567	49828599	49856567	-	ENST00000331456.6@TRAIP	ENST00000331456.6	protein_coding	49856356,49848143,49847525,49844541,49843801,49842453,49841826,49840985,49840284,49839772,49831916,49830020,49829617,49829458,49828599	49856567,49848200,49847608,49844580,49843928,49842547,49841939,49841072,49840373,49839860,49832068,49830068,49829766,49829508,49829225	Gene ID= ENSG00000183763.8 TPM= 1.93 Transcript Type= protein_coding
chr3	49908862	49930145	49908862	49930145	-	ENST00000296473.7@MON1A	ENST00000296473.7	protein_coding	49929609,49913220,49911526,49910119,49909253,49908862	49930145,49913359,49912011,49910884,49909400,49909154	Gene ID= ENSG00000164077.13 TPM= 27.99 Transcript Type= protein_coding
chr3	49908873	49929889	49908873	49929889	-	ENST00000455683.6@MON1A	ENST00000455683.6	protein_coding	49929609,49913220,49910119,49909253,49908873	49929889,49913359,49910884,49909400,49909154	Gene ID= ENSG00000164077.13 TPM= 9.65 Transcript Type= protein_coding
chr3	49908875	49929889	49908875	49929889	-	ENST00000486107.5@MON1A	ENST00000486107.5	protein_coding	49929609,49913220,49908875	49929889,49913359,49910884	Gene ID= ENSG00000164077.13 TPM= 1.93 Transcript Type= retained_intron
chr3	49940152	50077249	49940152	50077249	+	transcript2426.chr3.nnic@RBM6	transcript2426.chr3.nnic	protein_coding	49940152,49962576,49967470,49972059,49975323,49999440,50046716,50047160,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,49968748,49972148,49975392,49999513,50046833,50047326,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077249	Gene ID= ENSG00000004534.14 TPM= 2.73 Transcript Type= NA
chr3	49940033	50077252	49940033	50077252	+	ENST00000266022.8@RBM6	ENST00000266022.8	protein_coding	49940033,49962576,49967470,49972059,49975323,49999440,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,49968748,49972148,49975392,49999513,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077252	Gene ID= ENSG00000004534.14 TPM= 11.42 Transcript Type= protein_coding
chr3	49940007	50077249	49940007	50077249	+	ENST00000442092.5@RBM6	ENST00000442092.5	protein_coding	49940007,49962576,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077249	Gene ID= ENSG00000004534.14 TPM= 3.7 Transcript Type= protein_coding
chr3	49940102	50077248	49940102	50077248	+	ENST00000422955.5@RBM6	ENST00000422955.5	protein_coding	49940102,49962576,49972059,49975323,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,49972148,49975392,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077248	Gene ID= ENSG00000004534.14 TPM= 4.34 Transcript Type= protein_coding
chr3	50088908	50119021	50088908	50119021	+	ENST00000347869.7@RBM5	ENST00000347869.7	protein_coding	50088908,50090382,50092043,50093720,50099982,50100532,50103083,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50089029,50090451,50092208,50093875,50100051,50100605,50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50119021	Gene ID= ENSG00000003756.16 TPM= 26.06 Transcript Type= protein_coding
chr3	50088919	50118957	50088919	50118957	+	transcript2443.chr3.nic@RBM5	transcript2443.chr3.nic	protein_coding	50088919,50090382,50092043,50093720,50099982,50100532,50103083,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50089029,50090451,50092208,50093875,50100051,50100605,50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 3.38 Transcript Type= NA
chr3	50088919	50118957	50088919	50118957	+	transcript2444.chr3.nic@RBM5	transcript2444.chr3.nic	protein_coding	50088919,50090382,50092043,50093720,50099982,50103083,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50089029,50090451,50092208,50093875,50100051,50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 6.27 Transcript Type= NA
chr3	50088919	50102194	50088919	50102194	+	ENST00000469838.5@RBM5	ENST00000469838.5	protein_coding	50088919,50090382,50092043,50093720,50099982	50089029,50090451,50092208,50093875,50102194	Gene ID= ENSG00000003756.16 TPM= 1.93 Transcript Type= protein_coding
chr3	50155058	50189073	50155058	50189073	+	transcript2453.chr3.nic@SEMA3F	transcript2453.chr3.nic	protein_coding	50155058,50159575,50173793,50174052,50174231,50176768,50182284,50182644,50182904,50183186,50183420,50184592,50185443,50185666,50185889,50186281,50186613,50187705	50155564,50159734,50173953,50174114,50174350,50176861,50182403,50182783,50183018,50183255,50183564,50184814,50185531,50185707,50186046,50186348,50186746,50189073	Gene ID= ENSG00000001617.11 TPM= 5.79 Transcript Type= NA
chr3	50235952	50259355	50235952	50259355	+	ENST00000313601.10@GNAI2	ENST00000313601.10	protein_coding	50235952,50252100,50252397,50253024,50256192,50256723,50256937,50257500,50258368	50236453,50252142,50252538,50253184,50256320,50256852,50257090,50257714,50259355	Gene ID= ENSG00000114353.16 TPM= 80.12 Transcript Type= protein_coding
chr3	50236156	50258891	50236156	50258891	+	transcript2460.chr3.nic@GNAI2	transcript2460.chr3.nic	protein_coding	50236156,50252100,50252397,50253024,50256192,50256723,50256937,50257500	50236453,50252142,50252538,50253184,50256320,50256852,50257090,50258891	Gene ID= ENSG00000114353.16 TPM= 2.9 Transcript Type= NA
chr3	50267601	50277142	50267601	50277142	+	transcript2462.chr3.nic@SEMA3B	transcript2462.chr3.nic	protein_coding	50267601,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273916,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50267769,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277142	Gene ID= ENSG00000012171.19 TPM= 4.34 Transcript Type= NA
chr3	50267608	50277139	50267608	50277139	+	ENST00000618865.4@SEMA3B	ENST00000618865.4	protein_coding	50267608,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273913,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50267769,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277139	Gene ID= ENSG00000012171.19 TPM= 3.38 Transcript Type= protein_coding
chr3	50287732	50292595	50287732	50292595	-	ENST00000417626.6@IFRD2	ENST00000417626.6	protein_coding	50292217,50290560,50290388,50290170,50289929,50289712,50289447,50289255,50288800,50288583,50288409,50287732	50292595,50290679,50290472,50290294,50290086,50289762,50289628,50289360,50288937,50288711,50288504,50288271	Gene ID= ENSG00000214706.10 TPM= 446.43 Transcript Type= protein_coding
chr3	50287743	50292434	50287743	50292434	-	transcript2471.chr3.nic@IFRD2	transcript2471.chr3.nic	protein_coding	50292217,50290560,50290170,50289929,50289712,50289447,50289255,50288800,50288583,50288409,50287743	50292434,50290679,50290294,50290086,50289762,50289628,50289360,50288937,50288711,50288504,50288271	Gene ID= ENSG00000214706.10 TPM= 43.93 Transcript Type= NA
chr3	50287743	50292435	50287743	50292435	-	transcript2477.chr3.nic@IFRD2	transcript2477.chr3.nic	protein_coding	50292217,50290560,50290388,50290170,50289929,50289712,50289447,50289255,50288800,50288583,50287743	50292435,50290679,50290472,50290294,50290086,50289762,50289628,50289360,50288937,50288711,50288504	Gene ID= ENSG00000214706.10 TPM= 20.41 Transcript Type= NA
chr3	50296402	50299416	50296402	50299416	-	ENST00000354862.4@NAT6	ENST00000354862.4	protein_coding	50299213,50296402	50299416,50297527	Gene ID= ENSG00000243477.5 TPM= 4.83 Transcript Type= protein_coding
chr3	50296418	50299421	50296418	50299421	-	ENST00000443094.2@NAT6	ENST00000443094.2	protein_coding	50299213,50296418	50299421,50297672	Gene ID= ENSG00000243477.5 TPM= 5.79 Transcript Type= protein_coding
chr3	50299889	50303620	50299889	50303620	-	ENST00000395144.6@HYAL1	ENST00000395144.6	protein_coding	50303466,50302057,50300988,50299889	50303620,50302980,50301077,50300800	Gene ID= ENSG00000114378.16 TPM= 11.58 Transcript Type= protein_coding
chr3	50317812	50322745	50317812	50322745	-	transcript2508.chr3.nic@HYAL2	transcript2508.chr3.nic	protein_coding	50322653,50320882,50319569,50318956,50317812	50322745,50321773,50320535,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 4.1 Transcript Type= NA
chr3	50317812	50322777	50317812	50322777	-	ENST00000442581.1@HYAL2	ENST00000442581.1	protein_coding	50322653,50321366,50319569,50318956,50317812	50322777,50321773,50320535,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 30.17 Transcript Type= protein_coding
chr3	50317812	50322745	50317812	50322745	-	transcript2510.chr3.nic@HYAL2	transcript2510.chr3.nic	protein_coding	50322653,50321568,50319569,50318956,50317812	50322745,50321773,50320535,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 5.07 Transcript Type= NA
chr3	50317796	50322906	50317796	50322906	-	ENST00000357750.8@HYAL2	ENST00000357750.8	protein_coding	50322653,50319569,50318956,50317796	50322906,50320535,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 41.27 Transcript Type= protein_coding
chr3	50317790	50322782	50317790	50322782	-	ENST00000447092.5@HYAL2	ENST00000447092.5	protein_coding	50319569,50318956,50317790	50322782,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 2.41 Transcript Type= protein_coding
chr3	50324907	50328243	50324907	50328243	-	ENST00000232496.4@TUSC2	ENST00000232496.4	protein_coding	50327954,50326357,50324907	50328243,50326477,50326186	Gene ID= ENSG00000114383.9 TPM= 57.92 Transcript Type= protein_coding
chr3	50329788	50340841	50329788	50340841	-	ENST00000357043.6@RASSF1	ENST00000357043.6	protein_coding	50340556,50337905,50332050,50331559,50331334,50329788	50340841,50338023,50332154,50331856,50331449,50330727	Gene ID= ENSG00000068028.17 TPM= 3.54 Transcript Type= protein_coding
chr3	50329782	50337464	50329782	50337464	-	ENST00000327761.7@RASSF1	ENST00000327761.7	protein_coding	50337173,50332050,50331559,50331334,50329782	50337464,50332154,50331856,50331449,50330727	Gene ID= ENSG00000068028.17 TPM= 82.7 Transcript Type= protein_coding
chr3	50347488	50350785	50347488	50350785	-	transcript2529.chr3.nic@NPRL2	transcript2529.chr3.nic	protein_coding	50349931,50349665,50349386,50348874,50348685,50348527,50348317,50347759,50347488	50350785,50349833,50349494,50349010,50348782,50348563,50348410,50348241,50347673	Gene ID= ENSG00000114388.12 TPM= 1.93 Transcript Type= NA
chr3	50347488	50351091	50347488	50351091	-	ENST00000232501.7@NPRL2	ENST00000232501.7	protein_coding	50350575,50349931,50349665,50349386,50348874,50348685,50348527,50348317,50348124,50347759,50347488	50351091,50350022,50349833,50349494,50349010,50348782,50348563,50348410,50348241,50347901,50347673	Gene ID= ENSG00000114388.12 TPM= 43.44 Transcript Type= protein_coding
chr3	50350695	50354079	50350695	50354079	+	ENST00000425346.5@CYB561D2	ENST00000425346.5	protein_coding	50350695,50351409,50352009,50353241	50350984,50351560,50352046,50354079	Gene ID= ENSG00000114395.10 TPM= 11.27 Transcript Type= protein_coding
chr3	50350845	50354069	50350845	50354069	+	ENST00000232508.9@CYB561D2	ENST00000232508.9	protein_coding	50350845,50351343,50352009,50353241	50350984,50351560,50352046,50354069	Gene ID= ENSG00000114395.10 TPM= 10.3 Transcript Type= protein_coding
chr3	50350877	50354069	50350877	50354069	+	transcript2533.chr3.nic@CYB561D2	transcript2533.chr3.nic	protein_coding	50350877,50351409,50353241	50350984,50351560,50354069	Gene ID= ENSG00000114395.10 TPM= 2.58 Transcript Type= NA
chr3	50354759	50359559	50354759	50359559	-	transcript2536.chr3.nnic@TMEM115	transcript2536.chr3.nnic	protein_coding	50358213,50355082,50354759	50359559,50355547,50354927	Gene ID= ENSG00000126062.3 TPM= 4.34 Transcript Type= NA
chr3	50354749	50359610	50354749	50359610	-	ENST00000266025.3@TMEM115	ENST00000266025.3	protein_coding	50358213,50354749	50359610,50355547	Gene ID= ENSG00000126062.3 TPM= 101.84 Transcript Type= protein_coding
chr3	50558031	50567793	50558031	50567793	-	transcript2542.chr3.nnic@C3orf18	transcript2542.chr3.nnic	protein_coding	50567463,50565454,50561722,50560917,50558031	50567793,50565861,50561747,50561064,50559737	Gene ID= ENSG00000088543.14 TPM= 2.41 Transcript Type= NA
chr3	50558025	50567665	50558025	50567665	-	ENST00000426034.5@C3orf18	ENST00000426034.5	protein_coding	50567463,50565466,50561722,50560917,50558025	50567665,50565861,50561747,50561064,50559737	Gene ID= ENSG00000088543.14 TPM= 3.38 Transcript Type= protein_coding
chr3	50569197	50584935	50569197	50584935	+	ENST00000232854.8@HEMK1	ENST00000232854.8	protein_coding	50569197,50570931,50571710,50572115,50577052,50577509,50577826,50578821,50579844,50580116,50580381	50569574,50571332,50571801,50572208,50577186,50577573,50577875,50578926,50579939,50580229,50584935	Gene ID= ENSG00000114735.9 TPM= 1.93 Transcript Type= protein_coding
chr3	50569493	50580672	50569493	50580672	+	ENST00000455834.5@HEMK1	ENST00000455834.5	protein_coding	50569493,50570931,50571710,50572115,50577052,50577509,50577826,50578821,50579844,50580116,50580381	50569545,50571332,50571801,50572208,50577186,50577573,50577875,50578926,50579939,50580229,50580672	Gene ID= ENSG00000114735.9 TPM= 2.9 Transcript Type= protein_coding
chr3	50606522	50611831	50606522	50611831	-	ENST00000348721.3@CISH	ENST00000348721.3	protein_coding	50611631,50608373,50606522	50611831,50608593,50608142	Gene ID= ENSG00000114737.15 TPM= 27.03 Transcript Type= protein_coding
chr3	50606490	50611761	50606490	50611761	-	ENST00000491847.1@CISH	ENST00000491847.1	protein_coding	50608373,50606490	50611761,50608142	Gene ID= ENSG00000114737.15 TPM= 43.44 Transcript Type= retained_intron
chr3	50617131	50649297	50617131	50649297	+	ENST00000621469.4@MAPKAPK3	ENST00000621469.4	protein_coding	50617131,50617514,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894	50617241,50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649297	Gene ID= ENSG00000114738.10 TPM= 320.97 Transcript Type= protein_coding
chr3	50617170	50649288	50617170	50649288	+	ENST00000357955.6@MAPKAPK3	ENST00000357955.6	protein_coding	50617170,50617514,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894	50617226,50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649288	Gene ID= ENSG00000114738.10 TPM= 196.43 Transcript Type= protein_coding
chr3	50651280	50654615	50651280	50654615	-	transcript2603.chr3.nnic@NA	transcript2603.chr3.nnic	NA	50651280	50654615	Gene ID= novel_gene_chr3_2604 TPM= 13.51 Transcript Type= NA
chr3	51385047	51389397	51385047	51389397	+	ENST00000528157.5@MANF	ENST00000528157.5	protein_coding	51385047,51386208,51387737,51388905	51385436,51386335,51387878,51389397	Gene ID= ENSG00000145050.15 TPM= 1.93 Transcript Type= protein_coding
chr3	51391268	51397908	51391268	51397908	+	ENST00000563281.1@RBM15B	ENST00000563281.1	protein_coding	51391268	51397908	Gene ID= ENSG00000259956.1 TPM= 20.27 Transcript Type= protein_coding
chr3	51538719	51663594	51538719	51663594	+	transcript2624.chr3.nnic@RAD54L2	transcript2624.chr3.nnic	protein_coding	51538719,51590367,51627553,51629334,51630272,51630705,51633577,51633902,51635593,51637161,51638144,51639419,51639881,51641749,51643875,51645024,51645591,51646285,51655971,51657580,51660026,51662426	51538915,51590559,51627754,51629473,51630388,51630931,51633759,51634035,51635789,51637503,51638321,51639670,51639999,51641867,51643974,51645229,51645763,51646481,51656170,51657669,51660118,51663594	Gene ID= ENSG00000164080.13 TPM= 6.76 Transcript Type= NA
chr3	51671175	51704322	51671175	51704322	+	ENST00000457573.5@TEX264	ENST00000457573.5	protein_coding	51671175,51672341,51674271,51684413,51699406,51703724	51671288,51672392,51674562,51684634,51699574,51704322	Gene ID= ENSG00000164081.12 TPM= 2.09 Transcript Type= protein_coding
chr3	51671175	51704322	51671175	51704322	+	ENST00000611400.4@TEX264	ENST00000611400.4	protein_coding	51671175,51672210,51674271,51684413,51699406,51703724	51671288,51672301,51674562,51684634,51699574,51704322	Gene ID= ENSG00000164081.12 TPM= 7.89 Transcript Type= protein_coding
chr3	51671232	51704323	51671232	51704323	+	ENST00000341333.9@TEX264	ENST00000341333.9	protein_coding	51671232,51674271,51684413,51699406,51703724	51671288,51674562,51684634,51699574,51704323	Gene ID= ENSG00000164081.12 TPM= 36.36 Transcript Type= protein_coding
chr3	51933430	51941941	51933430	51941941	-	ENST00000232888.6@RRP9	ENST00000232888.6	protein_coding	51941781,51941409,51938095,51937669,51937545,51937192,51936431,51936257,51935592,51935342,51935197,51934631,51934472,51933708,51933430	51941941,51941491,51938204,51937736,51937586,51937318,51936555,51936349,51935692,51935476,51935259,51934776,51934551,51933781,51933599	Gene ID= ENSG00000114767.6 TPM= 99.43 Transcript Type= protein_coding
chr3	51942327	51948862	51942327	51948862	+	transcript2650.chr3.nnic@PARP3	transcript2650.chr3.nnic	protein_coding	51942327,51942930,51943354,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311	51942708,51943046,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 2.65 Transcript Type= NA
chr3	51942359	51948862	51942359	51948862	+	ENST00000398755.7@PARP3	ENST00000398755.7	protein_coding	51942359,51943354,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311	51942708,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 2.65 Transcript Type= protein_coding
chr3	51943295	51948862	51943295	51948862	+	transcript2653.chr3.nic@PARP3	transcript2653.chr3.nic	protein_coding	51943295,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311	51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 2.65 Transcript Type= NA
chr3	51942345	51948862	51942345	51948862	+	ENST00000417220.6@PARP3	ENST00000417220.6	protein_coding	51942345,51942930,51943349,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311	51942708,51943046,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 9.41 Transcript Type= protein_coding
chr3	51957458	51967530	51957458	51967530	-	transcript2660.chr3.nic@PCBP4	transcript2660.chr3.nic	protein_coding	51967326,51962810,51961941,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957458	51967530,51962892,51962088,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 11.92 Transcript Type= NA
chr3	51957458	51967445	51957458	51967445	-	ENST00000461554.5@PCBP4	ENST00000461554.5	protein_coding	51967326,51961941,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957458	51967445,51962088,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 14.82 Transcript Type= protein_coding
chr3	51957458	51967479	51957458	51967479	-	transcript2670.chr3.nic@PCBP4	transcript2670.chr3.nic	protein_coding	51967326,51962810,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957458	51967479,51962892,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 10.63 Transcript Type= NA
chr3	51957458	51967404	51957458	51967404	-	transcript2677.chr3.nnic@PCBP4	transcript2677.chr3.nnic	protein_coding	51967172,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957458	51967404,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 11.59 Transcript Type= NA
chr3	51957458	51967518	51957458	51967518	-	transcript2684.chr3.nic@PCBP4	transcript2684.chr3.nic	protein_coding	51967326,51961160,51961010,51960866,51960526,51960189,51959577,51959367,51959229,51959047,51958790,51957458	51967518,51961304,51961033,51960898,51960642,51960320,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 9.26 Transcript Type= NA
chr3	51957454	51967457	51957454	51967457	-	ENST00000355852.6@PCBP4	ENST00000355852.6	protein_coding	51967326,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957454	51967457,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 82.06 Transcript Type= protein_coding
chr3	51968510	51983409	51968510	51983409	-	ENST00000483233.5@ABHD14B	ENST00000483233.5	protein_coding	51983201,51973965,51971460,51969943,51968510	51983409,51974234,51971698,51970184,51969605	Gene ID= ENSG00000114779.19 TPM= 14.48 Transcript Type= protein_coding
chr3	51973645	51981196	51973645	51981196	+	transcript2696.chr3.nic@ABHD14A	transcript2696.chr3.nic	protein_coding	51973645,51977871,51978259,51980393,51980836	51973905,51978082,51978374,51980628,51981196	Gene ID= ENSG00000248487.8 TPM= 2.9 Transcript Type= NA
chr3	51975068	51981196	51975068	51981196	+	ENST00000273596.7@ABHD14A	ENST00000273596.7	protein_coding	51975068,51977871,51978259,51980393,51980836	51975204,51978082,51978374,51980628,51981196	Gene ID= ENSG00000248487.8 TPM= 12.55 Transcript Type= protein_coding
chr3	51983278	51989202	51983278	51989202	+	ENST00000636358.1@ACY1	ENST00000636358.1	protein_coding	51983278,51984047,51985207,51985361,51985852,51986255,51986415,51986605,51986988,51987147,51987309,51987556,51988524,51988766,51988911	51983589,51984158,51985271,51985465,51985946,51986331,51986504,51986661,51987061,51987196,51987453,51987624,51988603,51988826,51989202	Gene ID= ENSG00000243989.8 TPM= 53.09 Transcript Type= protein_coding
chr3	51983435	51989197	51983435	51989197	+	ENST00000636880.1@ACY1	ENST00000636880.1	protein_coding	51983435,51984047,51985361,51985852,51986255,51986415,51986605,51986988,51987147,51987309,51987556,51988524,51988766,51988911	51983589,51984158,51985465,51985946,51986331,51986504,51986661,51987061,51987196,51987453,51987624,51988603,51988826,51989197	Gene ID= ENSG00000243989.8 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr3	51993600	51995942	51993600	51995942	-	ENST00000294189.10@RPL29	ENST00000294189.10	protein_coding	51995857,51995425,51995042,51993600	51995942,51995469,51995106,51994126	Gene ID= ENSG00000162244.10 TPM= 438.25 Transcript Type= protein_coding
chr3	52048919	52056550	52048919	52056550	-	ENST00000495880.1@DUSP7	ENST00000495880.1	protein_coding	52055850,52053940,52048919	52056550,52054374,52051122	Gene ID= ENSG00000164086.9 TPM= 88.81 Transcript Type= protein_coding
chr3	52198112	52214302	52198112	52214302	+	transcript2718.chr3.nnic@ALAS1	transcript2718.chr3.nnic	protein_coding	52198112,52199210,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214009	52198255,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214302	Gene ID= ENSG00000023330.14 TPM= 5.55 Transcript Type= NA
chr3	52198086	52214180	52198086	52214180	+	ENST00000469224.5@ALAS1	ENST00000469224.5	protein_coding	52198086,52199210,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020	52198255,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214180	Gene ID= ENSG00000023330.14 TPM= 3.62 Transcript Type= protein_coding
chr3	52198132	52214324	52198132	52214324	+	ENST00000310271.6@ALAS1	ENST00000310271.6	protein_coding	52198132,52199221,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020	52198255,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214324	Gene ID= ENSG00000023330.14 TPM= 123.8 Transcript Type= protein_coding
chr3	52198144	52214292	52198144	52214292	+	ENST00000484952.5@ALAS1	ENST00000484952.5	protein_coding	52198144,52198672,52199210,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020	52198255,52198848,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214292	Gene ID= ENSG00000023330.14 TPM= 12.79 Transcript Type= protein_coding
chr3	52228610	52239260	52228610	52239260	-	ENST00000305533.9@TWF2	ENST00000305533.9	protein_coding	52238992,52235029,52231944,52231444,52231127,52230870,52229920,52229661,52228610	52239260,52235106,52232122,52231539,52231231,52230995,52230070,52229782,52229201	Gene ID= ENSG00000247596.8 TPM= 37.57 Transcript Type= protein_coding
chr3	52228610	52235237	52228610	52235237	-	transcript2727.chr3.nic@TWF2	transcript2727.chr3.nic	protein_coding	52235029,52231944,52231444,52231127,52230870,52229920,52229661,52228610	52235237,52232122,52231539,52231231,52230995,52230070,52229782,52229201	Gene ID= ENSG00000247596.8 TPM= 247.53 Transcript Type= NA
chr3	52245793	52250595	52245793	52250595	+	ENST00000323588.8@PPM1M	ENST00000323588.8	protein_coding	52245793,52246695,52246974,52247682,52248153,52248335,52248637,52248956,52249174,52249670	52246048,52246812,52247228,52247794,52248237,52248453,52248700,52249063,52249322,52250595	Gene ID= ENSG00000164088.17 TPM= 5.79 Transcript Type= protein_coding
chr3	52254421	52278643	52254421	52278643	-	ENST00000296490.7@WDR82	ENST00000296490.7	protein_coding	52278201,52270712,52266952,52261380,52260385,52259717,52259197,52258536,52254421	52278643,52270809,52267018,52261479,52260501,52259872,52259266,52258678,52257519	Gene ID= ENSG00000164091.11 TPM= 13.51 Transcript Type= protein_coding
chr3	52287818	52293475	52287818	52293475	+	transcript2747.chr3.nic@GLYCTK	transcript2747.chr3.nic	protein_coding	52287818,52290960,52291747,52292260	52287876,52291111,52291922,52293475	Gene ID= ENSG00000168237.17 TPM= 3.86 Transcript Type= NA
chr3	52287820	52293475	52287820	52293475	+	ENST00000486393.5@GLYCTK	ENST00000486393.5	protein_coding	52287820,52290304,52290960,52291745,52292260	52287876,52290719,52291111,52291922,52293475	Gene ID= ENSG00000168237.17 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr3	52401013	52410350	52401013	52410350	-	ENST00000460680.5@BAP1	ENST00000460680.5	protein_coding	52409842,52409714,52409554,52408474,52407958,52407399,52407174,52406829,52406253,52405765,52405110,52404453,52403416,52403138,52402779,52402602,52401013	52410350,52409743,52409608,52408606,52408077,52407460,52407316,52406907,52406376,52405912,52405294,52404586,52403894,52403298,52402871,52402674,52402421	Gene ID= ENSG00000163930.9 TPM= 86.23 Transcript Type= protein_coding
chr3	52401013	52410008	52401013	52410008	-	transcript2758.chr3.nic@BAP1	transcript2758.chr3.nic	protein_coding	52409842,52409714,52409554,52408474,52407958,52407399,52407174,52406829,52406253,52405765,52405110,52404453,52403416,52403138,52402779,52402602,52401013	52410008,52409743,52409608,52408606,52408077,52407460,52407316,52406907,52406376,52405912,52405294,52404586,52403894,52403298,52402940,52402674,52402421	Gene ID= ENSG00000163930.9 TPM= 10.94 Transcript Type= NA
chr3	52401013	52405521	52401013	52405521	-	transcript2764.chr3.nic@BAP1	transcript2764.chr3.nic	protein_coding	52405110,52404453,52403416,52403138,52402779,52402602,52401013	52405521,52404586,52403894,52403298,52402871,52402674,52402421	Gene ID= ENSG00000163930.9 TPM= 21.72 Transcript Type= NA
chr3	52410643	52414862	52410643	52414862	+	transcript2768.chr3.nnic@PHF7	transcript2768.chr3.nnic	protein_coding	52410643,52412811,52413996,52414496,52414701	52411339,52412920,52414048,52414587,52414862	Gene ID= ENSG00000010318.20 TPM= 1.93 Transcript Type= NA
chr3	52451102	52454070	52451102	52454070	-	ENST00000232975.7@TNNC1	ENST00000232975.7	protein_coding	52453992,52452483,52452106,52451744,52451391,52451102	52454070,52452513,52452252,52451858,52451527,52451306	Gene ID= ENSG00000114854.7 TPM= 4174.89 Transcript Type= protein_coding
chr3	52455617	52481914	52455617	52481914	+	ENST00000420808.2@NISCH	ENST00000420808.2	protein_coding	52455617,52457843,52458662,52470859,52471814,52472303,52473734,52476447,52477574,52478097,52478449,52479749,52480184,52480879	52455734,52457926,52458844,52470907,52471977,52472398,52473829,52476599,52477642,52478282,52478577,52479862,52480295,52481914	Gene ID= ENSG00000010322.15 TPM= 17.38 Transcript Type= protein_coding
chr3	52495338	52524495	52495338	52524495	+	ENST00000321725.10@STAB1	ENST00000321725.10	protein_coding	52495338,52501166,52501638,52502006,52502159,52502632,52502999,52503344,52503772,52504028,52504461,52504739,52505003,52505319,52505668,52505883,52506170,52506692,52507613,52507931,52508273,52509210,52509870,52510142,52510349,52511650,52512341,52512596,52512828,52513130,52513717,52513883,52514115,52514365,52514701,52514989,52515423,52516043,52516356,52516542,52516692,52516984,52517320,52517550,52517881,52518312,52518536,52518723,52519264,52519505,52519944,52520204,52520400,52520642,52520804,52521361,52521596,52521844,52522037,52522330,52522555,52522775,52523025,52523222,52523427,52523652,52523871,52524100,52524300	52495491,52501302,52501753,52502091,52502228,52502727,52503109,52503540,52503902,52504155,52504549,52504876,52505143,52505381,52505781,52505936,52506250,52506850,52507675,52508026,52508359,52509321,52510056,52510235,52510507,52511745,52512436,52512643,52512958,52513241,52513794,52513981,52514213,52514496,52514829,52515045,52515506,52516238,52516451,52516587,52516768,52517109,52517393,52517624,52518003,52518359,52518613,52518869,52519404,52519564,52520120,52520290,52520549,52520698,52521005,52521510,52521700,52521951,52522230,52522474,52522688,52522940,52523134,52523341,52523576,52523756,52524017,52524213,52524495	Gene ID= ENSG00000010327.10 TPM= 36.68 Transcript Type= protein_coding
chr3	52524389	52533777	52524389	52533777	-	ENST00000422318.6@NT5DC2	ENST00000422318.6	protein_coding	52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524817,52524389	52533777,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524881,52524731	Gene ID= ENSG00000168268.10 TPM= 11.58 Transcript Type= protein_coding
chr3	52536602	52540525	52536602	52540525	+	ENST00000307106.3@SMIM4	ENST00000307106.3	protein_coding	52536602,52540424	52536773,52540525	Gene ID= ENSG00000168273.7 TPM= 81.09 Transcript Type= protein_coding
chr3	52603540	52685958	52603540	52685958	-	transcript2803.chr3.nnic@PBRM1	transcript2803.chr3.nnic	protein_coding	52685749,52684856,52682092,52681695,52679574,52678500,52668498,52662133,52658199,52651742,52648344,52644704,52643248,52641954,52634602,52628894,52627273,52624897,52617262,52615351,52609313,52603540	52685958,52684914,52682233,52681820,52679726,52678597,52668645,52662276,52658315,52651810,52648442,52644789,52643343,52642045,52634815,52629035,52627370,52624941,52617538,52615456,52609955,52603732	Gene ID= ENSG00000163939.18 TPM= 2.41 Transcript Type= NA
chr3	52603540	52685927	52603540	52685927	-	transcript2805.chr3.nnic@PBRM1	transcript2805.chr3.nnic	protein_coding	52685749,52681695,52679574,52678500,52668498,52662133,52658199,52651742,52648344,52644704,52643248,52641954,52634602,52628894,52627273,52624897,52617262,52615351,52609313,52603540	52685927,52681820,52679726,52678597,52668645,52662276,52658315,52651810,52648442,52644789,52643343,52642045,52634815,52629035,52627370,52624941,52617538,52615456,52609955,52603732	Gene ID= ENSG00000163939.18 TPM= 5.31 Transcript Type= NA
chr3	52684814	52685958	52684814	52685958	-	transcript2845.chr3.nic@PBRM1	transcript2845.chr3.nic	protein_coding	52685749,52684814	52685958,52684914	Gene ID= ENSG00000163939.18 TPM= 4.83 Transcript Type= NA
chr3	52685646	52696162	52685646	52696162	+	transcript2811.chr3.nnic@GNL3	transcript2811.chr3.nnic	protein_coding	52685646,52686769,52687246,52687502,52688109,52689074,52690592,52690945,52691542,52692872,52693187,52693408,52693632,52694037,52694193	52686055,52686827,52687383,52687615,52688192,52689206,52690704,52691071,52691629,52693046,52693329,52693544,52693807,52694103,52696162	Gene ID= ENSG00000163938.16 TPM= 3.86 Transcript Type= NA
chr3	52692371	52693433	52692371	52693433	-	transcript2846.chr3.nnic@NA	transcript2846.chr3.nnic	NA	52692371	52693433	Gene ID= novel_gene_chr3_2847 TPM= 1.93 Transcript Type= NA
chr3	52694492	52706012	52694492	52706012	-	transcript2830.chr3.nic@GLT8D1	transcript2830.chr3.nic	protein_coding	52705447,52704724,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694492	52706012,52704952,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035	Gene ID= ENSG00000016864.18 TPM= 5.07 Transcript Type= NA
chr3	52694488	52705786	52694488	52705786	-	ENST00000266014.10@GLT8D1	ENST00000266014.10	protein_coding	52705447,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694488	52705786,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035	Gene ID= ENSG00000016864.18 TPM= 7.96 Transcript Type= protein_coding
chr3	52694503	52705781	52694503	52705781	-	ENST00000491606.5@GLT8D1	ENST00000491606.5	protein_coding	52705699,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694503	52705781,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035	Gene ID= ENSG00000016864.18 TPM= 5.07 Transcript Type= protein_coding
chr3	52705841	52708179	52705841	52708179	+	ENST00000233025.11@SPCS1	ENST00000233025.11	protein_coding	52705841,52706644,52706793,52707687	52706282,52706703,52706879,52708179	Gene ID= ENSG00000114902.13 TPM= 155.42 Transcript Type= protein_coding
chr3	52708449	52770949	52708449	52770949	-	ENST00000233027.9@NEK4	ENST00000233027.9	protein_coding	52770654,52768338,52766178,52765887,52763470,52760795,52751932,52749692,52746734,52746061,52744239,52743352,52741411,52739429,52737586,52708449	52770949,52768604,52766375,52765994,52763624,52760936,52752336,52749829,52746904,52746210,52744305,52743461,52741499,52739634,52737719,52711869	Gene ID= ENSG00000114904.12 TPM= 6.27 Transcript Type= protein_coding
chr3	52710784	52770942	52710784	52770942	-	transcript2816.chr3.nic@NEK4	transcript2816.chr3.nic	protein_coding	52770654,52768338,52766178,52765887,52763470,52760795,52751932,52746734,52746061,52744239,52743352,52741411,52739429,52737586,52710784	52770942,52768604,52766375,52765994,52763624,52760936,52752336,52746904,52746210,52744305,52743461,52741499,52739634,52737719,52711869	Gene ID= ENSG00000114904.12 TPM= 6.27 Transcript Type= NA
chr3	52810719	52811231	52810719	52811231	-	transcript2868.chr3.nnic@NA	transcript2868.chr3.nnic	NA	52810719	52811231	Gene ID= novel_gene_chr3_2869 TPM= 1.93 Transcript Type= NA
chr3	52813282	52835729	52813282	52835729	-	ENST00000468472.1@AC006254.1	ENST00000468472.1	protein_coding	52834940,52833617,52833383,52833114,52831408,52830553,52829119,52827093,52826791,52826541,52825886,52824842,52824397,52824190,52823823,52823556,52820991,52820631,52820291,52818052,52816884,52814209,52813975,52813282	52835729,52833749,52833430,52833247,52831478,52830670,52829279,52827197,52826953,52826651,52826014,52824958,52824565,52824315,52824004,52823741,52821130,52820785,52820317,52819990,52817058,52814363,52814071,52813490	Gene ID= ENSG00000243696.4 TPM= 5.31 Transcript Type= nonsense_mediated_decay
chr3	52833114	52834915	52833114	52834915	-	ENST00000486659.5@MUSTN1	ENST00000486659.5	protein_coding	52834744,52833617,52833114	52834915,52833749,52833430	Gene ID= ENSG00000272573.5 TPM= 52.13 Transcript Type= protein_coding
chr3	52833121	52840262	52833121	52840262	-	ENST00000495552.1@TMEM110-MUSTN1	ENST00000495552.1	protein_coding	52835789,52834940,52833617,52833121	52840262,52835302,52833749,52833430	Gene ID= ENSG00000248592.7 TPM= 425.22 Transcript Type= retained_intron
chr3	52847258	52897590	52847258	52897590	-	transcript2880.chr3.nnic@TMEM110-MUSTN1	transcript2880.chr3.nnic	protein_coding	52897291,52855396,52852603,52849792,52847258	52897590,52855444,52852698,52849913,52849214	Gene ID= ENSG00000248592.7 TPM= 1.93 Transcript Type= NA
chr3	52836756	52897596	52836756	52897596	-	ENST00000355083.9@TMEM110	ENST00000355083.9	protein_coding	52897291,52855396,52852603,52849792,52844829,52843721,52842811,52836756	52897596,52855444,52852698,52849913,52844941,52843798,52842960,52840610	Gene ID= ENSG00000213533.11 TPM= 6.76 Transcript Type= protein_coding
chr3	52847257	52897590	52847257	52897590	-	transcript2879.chr3.nic@TMEM110	transcript2879.chr3.nic	protein_coding	52897291,52855396,52852603,52849792,52847257	52897590,52855444,52852698,52849913,52847551	Gene ID= ENSG00000213533.11 TPM= 2.9 Transcript Type= NA
chr3	52903572	53046068	52903572	53046068	-	ENST00000394752.7@SFMBT1	ENST00000394752.7	protein_coding	53045816,52969101,52954317,52943353,52934813,52932062,52930941,52930329,52928191,52926031,52921705,52920537,52918484,52916150,52913478,52912538,52911003,52907555,52907069,52906113,52903572	53046068,52969258,52954411,52943593,52934901,52932308,52931035,52930430,52928341,52926113,52921831,52920650,52918526,52916214,52913617,52912647,52911178,52907733,52907314,52906241,52905276	Gene ID= ENSG00000163935.13 TPM= 1.93 Transcript Type= protein_coding
chr3	52904614	53045429	52904614	53045429	-	transcript2887.chr3.nnic@SFMBT1	transcript2887.chr3.nnic	protein_coding	53044946,52969101,52954317,52943353,52934813,52932062,52930941,52930329,52928191,52926031,52921705,52920537,52918484,52916150,52913478,52912538,52911003,52907555,52907069,52906113,52904614	53045429,52969258,52954411,52943593,52934901,52932308,52931035,52930430,52928341,52926113,52921831,52920650,52918526,52916214,52913617,52912647,52911178,52907733,52907314,52906241,52905276	Gene ID= ENSG00000163935.13 TPM= 1.93 Transcript Type= NA
chr3	52911003	53046582	52911003	53046582	-	transcript2891.chr3.nic@SFMBT1	transcript2891.chr3.nic	protein_coding	53046460,53019030,53018086,52969101,52954317,52943353,52934813,52932062,52930941,52930329,52928191,52926031,52921705,52920537,52918484,52916150,52913478,52912538,52911003	53046582,53019122,53018228,52969258,52954411,52943593,52934901,52932308,52931035,52930430,52928341,52926113,52921831,52920650,52918526,52916214,52913617,52912647,52911178	Gene ID= ENSG00000163935.13 TPM= 4.18 Transcript Type= NA
chr3	52911003	53046567	52911003	53046567	-	transcript2898.chr3.nic@SFMBT1	transcript2898.chr3.nic	protein_coding	53046460,52969101,52954317,52943353,52934813,52932062,52930941,52930329,52928191,52926031,52921705,52920537,52918484,52916150,52913478,52912538,52911003	53046567,52969258,52954411,52943593,52934901,52932308,52931035,52930430,52928341,52926113,52921831,52920650,52918526,52916214,52913617,52912647,52911178	Gene ID= ENSG00000163935.13 TPM= 4.18 Transcript Type= NA
chr3	53066852	53068226	53066852	53068226	-	transcript2901.chr3.nnic@NA	transcript2901.chr3.nnic	NA	53066852	53068226	Gene ID= novel_gene_chr3_2902 TPM= 1.93 Transcript Type= NA
chr3	53088483	53130462	53088483	53130462	-	ENST00000296292.7@RFT1	ENST00000296292.7	protein_coding	53130338,53125909,53123724,53122374,53121699,53119884,53111830,53106819,53105673,53103953,53099381,53092369,53088483	53130462,53125994,53123840,53122563,53121800,53120021,53111908,53106869,53105803,53104097,53099486,53092618,53092070	Gene ID= ENSG00000163933.9 TPM= 2.9 Transcript Type= protein_coding
chr3	53091665	53130464	53091665	53130464	-	transcript2906.chr3.nnic@RFT1	transcript2906.chr3.nnic	protein_coding	53130338,53125909,53122374,53121699,53119884,53118621,53111830,53106819,53105673,53103953,53099381,53092369,53091665	53130464,53125994,53122563,53121800,53120021,53118803,53111908,53106869,53105803,53104097,53099486,53092618,53092070	Gene ID= ENSG00000163933.9 TPM= 1.93 Transcript Type= NA
chr3	53161120	53192717	53161120	53192717	+	ENST00000394729.6@PRKCD	ENST00000394729.6	protein_coding	53161120,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108	53161428,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192717	Gene ID= ENSG00000163932.13 TPM= 1.93 Transcript Type= protein_coding
chr3	53225657	53256022	53225657	53256022	-	transcript2921.chr3.nic@TKT	transcript2921.chr3.nic	protein_coding	53255836,53243583,53242125,53241132,53240251,53237797,53234983,53233156,53231357,53230457,53229280,53229007,53228276,53228056,53226756,53225657	53256022,53243622,53242242,53241245,53240348,53237921,53235174,53233274,53231550,53230621,53229436,53229137,53228359,53228149,53226878,53225931	Gene ID= ENSG00000163931.15 TPM= 2.9 Transcript Type= NA
chr3	53225657	53256022	53225657	53256022	-	transcript2924.chr3.nic@TKT	transcript2924.chr3.nic	protein_coding	53255836,53243583,53242125,53241132,53240251,53234983,53233156,53231357,53230457,53229280,53229007,53228276,53228056,53226756,53225657	53256022,53243622,53242242,53241245,53240348,53235174,53233274,53231550,53230621,53229436,53229137,53228359,53228149,53226878,53225931	Gene ID= ENSG00000163931.15 TPM= 9.65 Transcript Type= NA
chr3	53283428	53347610	53283428	53347610	-	ENST00000610213.5@DCP1A	ENST00000610213.5	protein_coding	53347383,53344902,53342144,53319407,53312241,53304177,53292069,53290791,53288065,53283428	53347610,53344942,53342271,53319473,53312379,53304290,53292827,53290856,53288283,53287660	Gene ID= ENSG00000272886.5 TPM= 11.58 Transcript Type= protein_coding
chr3	53816841	53846372	53816841	53846372	-	transcript2943.chr3.nnic@CHDH	transcript2943.chr3.nnic	protein_coding	53846083,53840929,53823306,53822491,53821647,53820474,53819532,53818938,53816841	53846372,53840999,53824067,53822642,53821722,53820608,53819674,53819040,53818195	Gene ID= ENSG00000016391.10 TPM= 2.25 Transcript Type= NA
chr3	53816841	53846399	53816841	53846399	-	transcript2944.chr3.nnic@CHDH	transcript2944.chr3.nnic	protein_coding	53845822,53840929,53823306,53822491,53821647,53820474,53819532,53818938,53816841	53846399,53840999,53824067,53822642,53821776,53820608,53819674,53819040,53818195	Gene ID= ENSG00000016391.10 TPM= 2.25 Transcript Type= NA
chr3	53816841	53846378	53816841	53846378	-	transcript2947.chr3.nnic@CHDH	transcript2947.chr3.nnic	protein_coding	53846083,53840929,53823306,53822491,53821647,53820474,53818938,53816841	53846378,53840999,53824067,53822642,53821776,53820608,53819040,53818195	Gene ID= ENSG00000016391.10 TPM= 2.25 Transcript Type= NA
chr3	53886900	53891868	53886900	53891868	-	transcript2954.chr3.nic@SELENOK	transcript2954.chr3.nic	protein_coding	53891770,53888393,53886900	53891868,53888483,53886934	Gene ID= ENSG00000113811.10 TPM= 13.51 Transcript Type= NA
chr3	53885301	53891865	53885301	53891865	-	ENST00000488746.1@SELENOK	ENST00000488746.1	protein_coding	53891770,53888393,53886851,53885826,53885301	53891865,53888483,53886934,53885904,53885561	Gene ID= ENSG00000113811.10 TPM= 21.24 Transcript Type= nonsense_mediated_decay
chr3	54122323	54879187	54122323	54879187	+	transcript2957.chr3.nic@CACNA2D3	transcript2957.chr3.nic	protein_coding	54122323,54123513,54320442,54386715,54503492,54562800,54569795,54569954,54581803,54627787,54642128,54752599,54764218,54816853,54837159,54838568,54846393,54871539,54879018	54122835,54123594,54320558,54386774,54503654,54562931,54569855,54570104,54581877,54627876,54642241,54752677,54764351,54816870,54837230,54838648,54846467,54871622,54879187	Gene ID= ENSG00000157445.14 TPM= 40.54 Transcript Type= NA
chr3	54122588	54599339	54122588	54599339	+	transcript2959.chr3.nnic@CACNA2D3	transcript2959.chr3.nnic	protein_coding	54122588,54123513,54320442,54386715,54503492,54562800,54569795,54569954,54581803,54598999	54122835,54123594,54320558,54386774,54503654,54562931,54569855,54570104,54581877,54599339	Gene ID= ENSG00000157445.14 TPM= 1.93 Transcript Type= NA
chr3	56557173	56621797	56557173	56621797	+	ENST00000394672.7@CCDC66	ENST00000394672.7	protein_coding	56557173,56558846,56559569,56563684,56566594,56566950,56571181,56592970,56593491,56593944,56613589,56615128,56615922,56617112,56618172,56619271,56619777,56621532	56557253,56558910,56559594,56564125,56566759,56567053,56571302,56593101,56593741,56594028,56613750,56615272,56616053,56617605,56618212,56619527,56619901,56621797	Gene ID= ENSG00000180376.16 TPM= 1.93 Transcript Type= protein_coding
chr3	56646811	56683277	56646811	56683277	-	transcript2972.chr3.nic@FAM208A	transcript2972.chr3.nic	protein_coding	56682676,56673580,56671600,56670073,56669700,56668397,56666260,56663541,56662385,56660914,56660731,56648985,56648822,56646811	56683277,56673725,56671692,56670145,56669791,56668558,56666384,56663572,56662490,56661017,56660834,56649057,56648893,56647223	Gene ID= ENSG00000163946.13 TPM= 1.93 Transcript Type= NA
chr3	56682483	56684130	56682483	56684130	+	transcript2973.chr3.nnic@NA	transcript2973.chr3.nnic	NA	56682483	56684130	Gene ID= novel_gene_chr3_2974 TPM= 2.9 Transcript Type= NA
chr3	56727418	57079308	56727418	57079308	-	ENST00000338458.8@ARHGEF3	ENST00000338458.8	protein_coding	57079226,57035088,56958823,56882292,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56732238,56727418	57079308,57035176,56958889,56882354,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424,56729622	Gene ID= ENSG00000163947.11 TPM= 4.83 Transcript Type= protein_coding
chr3	56727418	56801967	56727418	56801967	-	ENST00000296315.7@ARHGEF3	ENST00000296315.7	protein_coding	56801703,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56732238,56727418	56801967,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424,56729622	Gene ID= ENSG00000163947.11 TPM= 6.76 Transcript Type= protein_coding
chr3	57227737	57273468	57227737	57273468	+	ENST00000288266.7@APPL1	ENST00000288266.7	protein_coding	57227737,57235566,57237492,57238045,57240465,57242101,57242856,57246076,57247395,57248193,57249360,57252269,57253682,57256957,57257246,57259028,57259845,57260117,57260628,57267742,57268398,57269541	57227937,57235664,57237551,57238116,57240552,57242142,57242914,57246222,57247477,57248351,57249548,57252311,57253738,57257051,57257428,57259080,57260019,57260153,57260774,57267792,57268487,57273468	Gene ID= ENSG00000157500.10 TPM= 19.31 Transcript Type= protein_coding
chr3	57227735	57268841	57227735	57268841	+	transcript2996.chr3.nic@APPL1	transcript2996.chr3.nic	protein_coding	57227735,57235566,57237492,57238045,57240465,57242101,57242856,57246076,57247395,57248193,57249360,57252269,57253682,57256957,57257246,57259028,57259845,57260117,57260628,57267742,57268398	57227937,57235664,57237551,57238116,57240552,57242142,57242914,57246222,57247477,57248351,57249548,57252311,57253738,57257051,57257428,57259080,57260019,57260153,57260774,57267792,57268841	Gene ID= ENSG00000157500.10 TPM= 5.31 Transcript Type= NA
chr3	57227788	57270512	57227788	57270512	+	transcript2999.chr3.nnic@APPL1	transcript2999.chr3.nnic	protein_coding	57227788,57235566,57237492,57238045,57240465,57242101,57242856,57246076,57247395,57248193,57249360,57252269,57256957,57257246,57259028,57259845,57260117,57260628,57267742,57268398,57269541	57227937,57235664,57237551,57238116,57240552,57242142,57242914,57246222,57247477,57248351,57249548,57252311,57257051,57257428,57259080,57260019,57260153,57260774,57267792,57268487,57270512	Gene ID= ENSG00000157500.10 TPM= 2.41 Transcript Type= NA
chr3	57262387	57263392	57262387	57263392	-	transcript3018.chr3.nnic@NA	transcript3018.chr3.nnic	NA	57262387	57263392	Gene ID= novel_gene_chr3_3019 TPM= 3.86 Transcript Type= NA
chr3	57276210	57292740	57276210	57292740	-	transcript3012.chr3.nnic@ASB14	transcript3012.chr3.nnic	protein_coding	57292633,57291912,57289064,57288155,57287901,57283194,57280302,57278377,57277767,57276210	57292740,57292104,57289123,57288286,57288059,57283439,57280473,57278920,57277920,57276728	Gene ID= ENSG00000239388.8 TPM= 8.69 Transcript Type= NA
chr3	57556254	57654979	57556254	57654979	+	transcript3032.chr3.nnic@PDE12	transcript3032.chr3.nnic	protein_coding	57556254,57559310,57654624	57557687,57559388,57654979	Gene ID= ENSG00000174840.8 TPM= 3.86 Transcript Type= NA
chr3	57571363	57597408	57571363	57597408	-	ENST00000303436.10@ARF4	ENST00000303436.10	protein_coding	57597074,57584384,57583898,57577316,57575548,57571363	57597408,57584464,57584007,57577387,57575673,57572298	Gene ID= ENSG00000168374.10 TPM= 28.96 Transcript Type= protein_coding
chr3	57756268	57913601	57756268	57913601	+	transcript3042.chr3.nic@SLMAP	transcript3042.chr3.nic	protein_coding	57756268,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57864807,57865242,57871636,57890041,57896511,57896873,57909076,57912381,57913158	57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57864857,57865292,57871698,57890100,57896591,57896932,57909150,57912701,57913601	Gene ID= ENSG00000163681.14 TPM= 5.47 Transcript Type= NA
chr3	57756268	57918480	57756268	57918480	+	transcript3043.chr3.nic@SLMAP	transcript3043.chr3.nic	protein_coding	57756268,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57864807,57871636,57890041,57896511,57896873,57909076,57912381,57913158,57916906	57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57864857,57871698,57890100,57896591,57896932,57909150,57912701,57913275,57918480	Gene ID= ENSG00000163681.14 TPM= 3.54 Transcript Type= NA
chr3	57756230	57929168	57756230	57929168	+	ENST00000295951.7@SLMAP	ENST00000295951.7	protein_coding	57756230,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57871636,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57927296	57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57871698,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57929168	Gene ID= ENSG00000163681.14 TPM= 6.44 Transcript Type= protein_coding
chr3	57889970	57929883	57889970	57929883	+	transcript3054.chr3.nic@SLMAP	transcript3054.chr3.nic	protein_coding	57889970,57896511,57896873,57909076,57912381,57913158,57916906,57922889,57925845,57927296	57890100,57896591,57896932,57909150,57912701,57913275,57917077,57923023,57925934,57929883	Gene ID= ENSG00000163681.14 TPM= 7.24 Transcript Type= NA
chr3	57889914	57913601	57889914	57913601	+	transcript3065.chr3.nic@SLMAP	transcript3065.chr3.nic	protein_coding	57889914,57896511,57896873,57909076,57912381,57913158	57890100,57896591,57896932,57909150,57912701,57913601	Gene ID= ENSG00000163681.14 TPM= 2.9 Transcript Type= NA
chr3	57890057	57918480	57890057	57918480	+	ENST00000438794.5@SLMAP	ENST00000438794.5	protein_coding	57890057,57896511,57896873,57909076,57912381,57913158,57916906	57890100,57896591,57896932,57909150,57912701,57913275,57918480	Gene ID= ENSG00000163681.14 TPM= 1.93 Transcript Type= protein_coding
chr3	57890041	57929126	57890041	57929126	+	ENST00000417128.5@SLMAP	ENST00000417128.5	protein_coding	57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296	57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57929126	Gene ID= ENSG00000163681.14 TPM= 3.86 Transcript Type= protein_coding
chr3	58237804	58295693	58237804	58295693	+	transcript3070.chr3.nic@ABHD6	transcript3070.chr3.nic	protein_coding	58237804,58256562,58267189,58269321,58270932,58274658,58285085,58285353,58293589,58295346	58237916,58256705,58267345,58269434,58271064,58274815,58285139,58285453,58294400,58295693	Gene ID= ENSG00000163686.14 TPM= 1.93 Transcript Type= NA
chr3	58237506	58294732	58237506	58294732	+	ENST00000478253.5@ABHD6	ENST00000478253.5	protein_coding	58237506,58249878,58256562,58267189,58269321,58270932,58274658,58285085,58285353,58293589	58237916,58249942,58256705,58267345,58269434,58271064,58274815,58285139,58285453,58294732	Gene ID= ENSG00000163686.14 TPM= 6.76 Transcript Type= protein_coding
chr3	58237532	58294734	58237532	58294734	+	ENST00000295962.8@ABHD6	ENST00000295962.8	protein_coding	58237532,58256562,58267189,58269321,58270932,58274658,58285085,58285353,58293589	58237916,58256705,58267345,58269434,58271064,58274815,58285139,58285453,58294734	Gene ID= ENSG00000163686.14 TPM= 3.86 Transcript Type= protein_coding
chr3	58306262	58324695	58306262	58324695	+	ENST00000445193.7@RPP14	ENST00000445193.7	protein_coding	58306262,58310309,58310507,58316515,58316915,58317440	58306651,58310406,58310591,58316591,58316993,58324695	Gene ID= ENSG00000163684.11 TPM= 2.9 Transcript Type= protein_coding
chr3	58306314	58318472	58306314	58318472	+	ENST00000481972.5@HTD2	ENST00000481972.5	protein_coding	58306314,58310507,58316515,58316915,58317440	58306417,58310591,58316591,58316993,58318472	Gene ID= ENSG00000255154.7 TPM= 7.72 Transcript Type= protein_coding
chr3	58332880	58425151	58332880	58425151	+	ENST00000356151.6@PXK	ENST00000356151.6	protein_coding	58332880,58365874,58369431,58382514,58390582,58391147,58391773,58394998,58395658,58397039,58397605,58399299,58403862,58408924,58409532,58410090,58412901,58424752	58333090,58365924,58369478,58382700,58390659,58391220,58391847,58395102,58395759,58397200,58397722,58399377,58403910,58409001,58409618,58410159,58412963,58425151	Gene ID= ENSG00000168297.15 TPM= 2.41 Transcript Type= protein_coding
chr3	58332898	58426023	58332898	58426023	+	ENST00000463280.5@PXK	ENST00000463280.5	protein_coding	58332898,58382514,58390582,58391147,58391773,58394998,58395658,58397039,58397605,58399299,58403862,58408924,58409532,58410090,58412901,58420536,58424752	58333090,58382700,58390659,58391220,58391847,58395102,58395759,58397200,58397722,58399377,58403910,58409001,58409618,58410159,58412963,58420568,58426023	Gene ID= ENSG00000168297.15 TPM= 2.9 Transcript Type= protein_coding
chr3	58427630	58433852	58427630	58433852	-	ENST00000302746.10@PDHB	ENST00000302746.10	protein_coding	58433768,58433631,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427630	58433852,58433684,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179	Gene ID= ENSG00000168291.12 TPM= 147.37 Transcript Type= protein_coding
chr3	58427630	58433857	58427630	58433857	-	ENST00000383714.8@PDHB	ENST00000383714.8	protein_coding	58433768,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427630	58433857,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179	Gene ID= ENSG00000168291.12 TPM= 15.13 Transcript Type= protein_coding
chr3	58427692	58433839	58427692	58433839	-	ENST00000461692.5@PDHB	ENST00000461692.5	protein_coding	58433631,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427692	58433839,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179	Gene ID= ENSG00000168291.12 TPM= 5.47 Transcript Type= retained_intron
chr3	58492114	58502352	58492114	58502352	+	ENST00000404589.7@KCTD6	ENST00000404589.7	protein_coding	58492114,58498713,58500946	58492169,58498782,58502352	Gene ID= ENSG00000168301.12 TPM= 26.06 Transcript Type= protein_coding
chr3	58564117	58577764	58564117	58577764	-	ENST00000360997.6@FAM107A	ENST00000360997.6	protein_coding	58577309,58569691,58567208,58564117	58577764,58569865,58567364,58566695	Gene ID= ENSG00000168309.16 TPM= 22.2 Transcript Type= protein_coding
chr3	61164632	61251451	61164632	61251451	-	transcript3129.chr3.nic@FHIT	transcript3129.chr3.nic	protein_coding	61251301,61200617,61166973,61164632	61251451,61200665,61167042,61165828	Gene ID= ENSG00000189283.9 TPM= 2.9 Transcript Type= NA
chr3	61559974	61562460	61559974	61562460	-	transcript3130.chr3.nnic@NA	transcript3130.chr3.nnic	NA	61559974	61562460	Gene ID= novel_gene_chr3_3131 TPM= 4.83 Transcript Type= NA
chr3	61742455	61743106	61742455	61743106	-	ENST00000472730.1@AC096919.1	ENST00000472730.1	processed_pseudogene	61742455	61743106	Gene ID= ENSG00000226360.5 TPM= 353.3 Transcript Type= processed_pseudogene
chr3	61561911	62297613	61561911	62297613	+	ENST00000474889.5@PTPRG	ENST00000474889.5	protein_coding	61561911,61748878,61989625,62003349,62078163,62132602,62157067,62167971,62191469,62195062,62201505,62203173,62218851,62231225,62243807,62255124,62262798,62267410,62267685,62269035,62271383,62272946,62273698,62275873,62276972,62277551,62281563,62282727,62292421,62293161	61562372,61748982,61989804,62003497,62078258,62132668,62157224,62168163,62191653,62195170,62201554,62203950,62218983,62231311,62243898,62255215,62262894,62267492,62267819,62269169,62271555,62273081,62273844,62275966,62277048,62277679,62281709,62282869,62292556,62297613	Gene ID= ENSG00000144724.19 TPM= 2.25 Transcript Type= protein_coding
chr3	61989624	62294020	61989624	62294020	+	transcript3133.chr3.nic@PTPRG	transcript3133.chr3.nic	protein_coding	61989624,62003349,62078163,62132602,62157067,62167971,62191469,62195062,62201505,62203173,62218851,62243807,62255124,62262798,62267410,62267685,62269035,62271383,62272946,62273698,62275873,62276972,62277551,62281563,62282727,62292421,62293161	61989804,62003497,62078258,62132668,62157224,62168163,62191653,62195170,62201554,62203950,62218983,62243898,62255215,62262894,62267492,62267819,62269169,62271555,62273081,62273844,62275966,62277048,62277679,62281709,62282869,62292556,62294020	Gene ID= ENSG00000144724.19 TPM= 5.15 Transcript Type= NA
chr3	61561911	62293329	61561911	62293329	+	ENST00000295874.14@PTPRG	ENST00000295874.14	protein_coding	61561911,61748878,61989625,62003349,62078163,62132602,62157067,62167971,62191469,62195062,62201505,62203173,62218851,62243807,62255124,62262798,62267410,62267685,62269035,62271383,62272946,62273698,62275873,62276972,62277551,62281563,62282727,62292421,62293161	61562372,61748982,61989804,62003497,62078258,62132668,62157224,62168163,62191653,62195170,62201554,62203950,62218983,62243898,62255215,62262894,62267492,62267819,62269169,62271555,62273081,62273844,62275966,62277048,62277679,62281709,62282869,62292556,62293329	Gene ID= ENSG00000144724.19 TPM= 2.25 Transcript Type= protein_coding
chr3	62281539	62296335	62281539	62296335	+	transcript3137.chr3.nic@PTPRG	transcript3137.chr3.nic	protein_coding	62281539,62282727,62292421,62293161	62281709,62282869,62292556,62296335	Gene ID= ENSG00000144724.19 TPM= 2.9 Transcript Type= NA
chr3	63833870	63863805	63833870	63863805	-	transcript3146.chr3.nic@THOC7	transcript3146.chr3.nic	protein_coding	63863504,63839656,63838372,63837976,63836301,63835324,63835154,63833870	63863805,63839773,63838499,63838062,63836358,63835390,63835223,63834199	Gene ID= ENSG00000163634.11 TPM= 6.76 Transcript Type= NA
chr3	63833871	63863868	63833871	63863868	-	ENST00000469584.5@THOC7	ENST00000469584.5	protein_coding	63863772,63838372,63837976,63836301,63835324,63835154,63833871	63863868,63838499,63838062,63836358,63835390,63835223,63834199	Gene ID= ENSG00000163634.11 TPM= 9.65 Transcript Type= protein_coding
chr3	63833870	63863903	63833870	63863903	-	ENST00000295899.9@THOC7	ENST00000295899.9	protein_coding	63863772,63839656,63838372,63837976,63836301,63835324,63835154,63833870	63863903,63839773,63838499,63838062,63836358,63835390,63835223,63834199	Gene ID= ENSG00000163634.11 TPM= 92.67 Transcript Type= protein_coding
chr3	63912094	63996636	63912094	63996636	+	transcript3140.chr3.nic@ATXN7	transcript3140.chr3.nic	protein_coding	63912094,63912588,63913157,63952379,63979915,63982186,63982939,63988059,63990176,63990738,63995505	63912181,63912923,63913225,63952483,63980167,63982445,63983021,63988324,63990374,63990859,63996636	Gene ID= ENSG00000163635.17 TPM= 5.79 Transcript Type= NA
chr3	64010549	64023560	64010549	64023560	-	ENST00000295901.8@PSMD6	ENST00000295901.8	protein_coding	64023275,64022318,64019296,64018818,64018599,64013439,64010878,64010549	64023560,64022523,64019441,64019037,64018707,64013607,64010955,64010764	Gene ID= ENSG00000163636.10 TPM= 362.67 Transcript Type= protein_coding
chr3	64010555	64023520	64010555	64023520	-	transcript3159.chr3.nic@PSMD6	transcript3159.chr3.nic	protein_coding	64023275,64022318,64019296,64018818,64018599,64010878,64010555	64023520,64022523,64019441,64019037,64018707,64010955,64010764	Gene ID= ENSG00000163636.10 TPM= 34.46 Transcript Type= NA
chr3	64010555	64023472	64010555	64023472	-	ENST00000492933.5@PSMD6	ENST00000492933.5	protein_coding	64023275,64022643,64022318,64019296,64018818,64018599,64013439,64010878,64010555	64023472,64022801,64022523,64019441,64019037,64018707,64013607,64010955,64010764	Gene ID= ENSG00000163636.10 TPM= 6.95 Transcript Type= protein_coding
chr3	64010555	64023437	64010555	64023437	-	ENST00000476464.5@PSMD6	ENST00000476464.5	protein_coding	64022318,64019296,64018818,64018599,64013439,64010878,64010555	64023437,64019441,64019037,64018707,64013607,64010955,64010764	Gene ID= ENSG00000163636.10 TPM= 1.16 Transcript Type= retained_intron
chr3	64194057	64268172	64194057	64268172	-	transcript3165.chr3.nic@PRICKLE2	transcript3165.chr3.nic	protein_coding	64267899,64194057	64268172,64198967	Gene ID= ENSG00000163637.12 TPM= 1.93 Transcript Type= NA
chr3	64515654	64688000	64515654	64688000	-	ENST00000498707.5@ADAMTS9	ENST00000498707.5	protein_coding	64687543,64686568,64681201,64658502,64655792,64655576,64654572,64654353,64651017,64649637,64647940,64641848,64633698,64633472,64631808,64631455,64622420,64622198,64621114,64615960,64615321,64613345,64606960,64604227,64603922,64601944,64596830,64594258,64568368,64561578,64550892,64546758,64541838,64541526,64541320,64541095,64539203,64533166,64522166,64515654	64688000,64686968,64681363,64658791,64655875,64655691,64654612,64654458,64651163,64649778,64648044,64641993,64633879,64633608,64631925,64631550,64622586,64622327,64621240,64616170,64615485,64613509,64607079,64604331,64604089,64602213,64596991,64594434,64568535,64561751,64551062,64546952,64541970,64541620,64541414,64541228,64539294,64533270,64522260,64517121	Gene ID= ENSG00000163638.13 TPM= 7.72 Transcript Type= protein_coding
chr3	66133610	66378927	66133610	66378927	+	ENST00000354883.10@SLC25A26	ENST00000354883.10	protein_coding	66133610,66220742,66236544,66243203,66262051,66263332,66346364,66362860,66369478,66370529,66377690	66133984,66221127,66236700,66243312,66262155,66263379,66346408,66362929,66369542,66370602,66378927	Gene ID= ENSG00000144741.17 TPM= 13.51 Transcript Type= protein_coding
chr3	66378797	66500932	66378797	66500932	-	ENST00000273261.7@LRIG1	ENST00000273261.7	protein_coding	66500190,66462438,66451559,66417129,66414920,66412871,66410129,66407348,66405198,66398970,66398112,66394040,66385981,66383991,66382982,66382273,66381479,66380577,66378797	66500932,66462509,66451633,66417266,66415063,66413014,66410272,66407491,66405278,66399041,66398183,66394203,66386301,66384272,66383401,66382398,66381631,66380861,66380489	Gene ID= ENSG00000144749.13 TPM= 72.88 Transcript Type= protein_coding
chr3	66378797	66501011	66378797	66501011	-	ENST00000383703.3@LRIG1	ENST00000383703.3	protein_coding	66500190,66462438,66451559,66417129,66414920,66412871,66410129,66407348,66405198,66401609,66398970,66398112,66394040,66385981,66384132,66382982,66382273,66381479,66380577,66378797	66501011,66462509,66451633,66417266,66415063,66413014,66410272,66407491,66405278,66401680,66399041,66398183,66394203,66386301,66384272,66383401,66382398,66381631,66380861,66380489	Gene ID= ENSG00000144749.13 TPM= 22.68 Transcript Type= protein_coding
chr3	66998307	67011210	66998307	67011210	+	ENST00000417314.2@KBTBD8	ENST00000417314.2	protein_coding	66998307,66998981,67003195,67007922	66998371,66999191,67004309,67011210	Gene ID= ENSG00000163376.11 TPM= 7.72 Transcript Type= protein_coding
chr3	67374719	67654614	67374719	67654614	-	ENST00000307227.9@SUCLG2	ENST00000307227.9	protein_coding	67654503,67609455,67529087,67528132,67520482,67518247,67508807,67498134,67495798,67400731,67374719	67654614,67609596,67529186,67528222,67520634,67518336,67508903,67498295,67495940,67400851,67375859	Gene ID= ENSG00000172340.14 TPM= 181.72 Transcript Type= protein_coding
chr3	68975214	69013961	68975214	69013961	-	ENST00000383701.7@EOGT	ENST00000383701.7	protein_coding	69013574,69012515,69011936,69009637,69008428,69007713,69005140,69004378,69001608,68998011,68988925,68988506,68988295,68987445,68982811,68979668,68978333,68975214	69013961,69012799,69011991,69009860,69008528,69007821,69005234,69004482,69001714,68998114,68989017,68988577,68988381,68987513,68982872,68979787,68978435,68977764	Gene ID= ENSG00000163378.13 TPM= 1.93 Transcript Type= protein_coding
chr3	68998158	69013684	68998158	69013684	-	transcript3222.chr3.nnic@EOGT	transcript3222.chr3.nnic	protein_coding	69013574,69012368,69011936,69009637,69008428,69007713,69005140,69004378,69001608,68998158	69013684,69012799,69011991,69009860,69008528,69007821,69005234,69004482,69001714,69000223	Gene ID= ENSG00000163378.13 TPM= 1.93 Transcript Type= NA
chr3	69013117	69014489	69013117	69014489	+	transcript3223.chr3.nnic@NA	transcript3223.chr3.nnic	NA	69013117	69014489	Gene ID= novel_gene_chr3_3224 TPM= 1.93 Transcript Type= NA
chr3	69028239	69052333	69028239	69052333	-	transcript3230.chr3.nic@TMF1	transcript3230.chr3.nic	protein_coding	69051945,69047358,69044492,69043750,69042807,69039551,69038843,69038564,69035023,69033548,69029815,69028239	69052333,69048562,69044595,69043876,69042912,69039693,69039009,69038720,69035115,69033704,69030007,69028295	Gene ID= ENSG00000144747.15 TPM= 2.41 Transcript Type= NA
chr3	69019827	69052303	69019827	69052303	-	ENST00000398559.6@TMF1	ENST00000398559.6	protein_coding	69051945,69047358,69044492,69043750,69042807,69039551,69038843,69038564,69035023,69033548,69029815,69028226,69027900,69025996,69025560,69024055,69019827	69052303,69048562,69044595,69043876,69042912,69039693,69039009,69038720,69035115,69033704,69030007,69028295,69027992,69026097,69025712,69024180,69023320	Gene ID= ENSG00000144747.15 TPM= 3.38 Transcript Type= protein_coding
chr3	69054730	69080408	69054730	69080408	-	ENST00000361055.8@UBA3	ENST00000361055.8	protein_coding	69080334,69080112,69077798,69075430,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730	69080408,69080153,69077918,69075510,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525	Gene ID= ENSG00000144744.16 TPM= 21.4 Transcript Type= protein_coding
chr3	69054730	69080408	69054730	69080408	-	ENST00000349511.8@UBA3	ENST00000349511.8	protein_coding	69080334,69077798,69075430,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730	69080408,69077918,69075510,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525	Gene ID= ENSG00000144744.16 TPM= 12.71 Transcript Type= protein_coding
chr3	69054730	69080381	69054730	69080381	-	ENST00000415609.6@UBA3	ENST00000415609.6	protein_coding	69080334,69077798,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730	69080381,69077918,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525	Gene ID= ENSG00000144744.16 TPM= 2.58 Transcript Type= protein_coding
chr3	69054730	69080385	69054730	69080385	-	transcript3244.chr3.nnic@UBA3	transcript3244.chr3.nnic	protein_coding	69080334,69080112,69077798,69075430,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056183,69056000,69055851,69054730	69080385,69080153,69077918,69075510,69071617,69068008,69064111,69063503,69063137,69062141,69061927,69057309,69056815,69056063,69055905,69055525	Gene ID= ENSG00000144744.16 TPM= 1.93 Transcript Type= NA
chr3	69084944	69106066	69084944	69106066	+	ENST00000273258.3@ARL6IP5	ENST00000273258.3	protein_coding	69084944,69101839,69104464	69085223,69102056,69106066	Gene ID= ENSG00000144746.6 TPM= 239.4 Transcript Type= protein_coding
chr3	69084993	69087491	69084993	69087491	+	transcript3263.chr3.nnic@NA	transcript3263.chr3.nnic	NA	69084993	69087491	Gene ID= novel_gene_chr3_3264 TPM= 4.83 Transcript Type= NA
chr3	69108672	69122595	69108672	69122595	-	ENST00000489031.5@LMOD3	ENST00000489031.5	protein_coding	69122504,69122093,69118699,69108672	69122595,69122409,69120060,69109121	Gene ID= ENSG00000163380.15 TPM= 3.86 Transcript Type= protein_coding
chr3	69739461	69965668	69739461	69965668	+	transcript3270.chr3.nnic@MITF	transcript3270.chr3.nnic	protein_coding	69739461,69818334,69879134,69937822,69939098,69941236,69949051,69951830,69956455,69959273,69964847	69739701,69818464,69879383,69938049,69939181,69941331,69949168,69951886,69956530,69959420,69965668	Gene ID= ENSG00000187098.14 TPM= 14.64 Transcript Type= NA
chr3	69739435	69968336	69739435	69968336	+	ENST00000352241.8@MITF	ENST00000352241.8	protein_coding	69739435,69879134,69937822,69939098,69941236,69949051,69951830,69956455,69959273,69964847	69739701,69879383,69938049,69939181,69941331,69949168,69951886,69956530,69959420,69968336	Gene ID= ENSG00000187098.14 TPM= 30.28 Transcript Type= protein_coding
chr3	70959191	71130837	70959191	71130837	-	ENST00000491238.5@FOXP1	ENST00000491238.5	protein_coding	71130498,71112536,71053636,71052537,71046942,71041328,71015549,71000972,70987994,70977828,70977643,70976941,70972555,70970736,70965890,70959191	71130837,71112637,71053773,71052626,71047095,71041532,71015653,71001059,70988077,70978029,70977722,70977042,70972676,70970805,70966056,70959391	Gene ID= ENSG00000114861.18 TPM= 3.86 Transcript Type= protein_coding
chr3	71681860	71725444	71681860	71725444	-	transcript3303.chr3.nic@EIF4E3	transcript3303.chr3.nic	protein_coding	71725192,71710412,71693875,71690010,71681860	71725444,71710484,71693941,71690165,71684728	Gene ID= ENSG00000163412.12 TPM= 22.2 Transcript Type= NA
chr3	71679122	71681411	71679122	71681411	-	transcript3311.chr3.nnic@NA	transcript3311.chr3.nnic	NA	71679122	71681411	Gene ID= novel_gene_chr3_3312 TPM= 1.93 Transcript Type= NA
chr3	71754050	71756496	71754050	71756496	+	ENST00000304411.2@GPR27	ENST00000304411.2	protein_coding	71754050	71756496	Gene ID= ENSG00000170837.2 TPM= 3.86 Transcript Type= protein_coding
chr3	72374605	72377072	72374605	72377072	-	transcript3314.chr3.nnic@NA	transcript3314.chr3.nnic	NA	72374605	72377072	Gene ID= novel_gene_chr3_3315 TPM= 2.9 Transcript Type= NA
chr3	72749279	72848480	72749279	72848480	-	ENST00000325599.12@SHQ1	ENST00000325599.12	protein_coding	72848198,72844359,72842280,72841045,72832369,72824424,72817230,72815350,72812671,72792916,72749279	72848480,72844423,72842402,72841199,72832481,72824551,72817384,72815403,72812794,72793036,72750836	Gene ID= ENSG00000144736.13 TPM= 27.03 Transcript Type= protein_coding
chr3	72996785	73069199	72996785	73069199	+	ENST00000356692.9@PPP4R2	ENST00000356692.9	protein_coding	72996785,72998077,73047186,73059037,73061023,73063673,73064003,73064852,73065397	72997071,72998158,73047356,73059130,73061060,73063747,73064146,73065141,73069199	Gene ID= ENSG00000163605.14 TPM= 22.04 Transcript Type= protein_coding
chr3	73382433	73624940	73382433	73624940	-	ENST00000263666.8@PDZRN3	ENST00000263666.8	protein_coding	73624103,73608598,73602354,73404148,73400922,73391018,73389816,73387968,73385669,73382433	73624940,73608684,73602461,73404395,73401009,73391116,73389878,73388069,73385785,73384930	Gene ID= ENSG00000121440.14 TPM= 22.2 Transcript Type= protein_coding
chr3	73421985	73423842	73421985	73423842	+	transcript3355.chr3.nnic@NA	transcript3355.chr3.nnic	NA	73421985	73423842	Gene ID= novel_gene_chr3_3356 TPM= 1.93 Transcript Type= NA
chr3	75417539	75421910	75417539	75421910	-	transcript3368.chr3.nnic@NA	transcript3368.chr3.nnic	NA	75417539	75421910	Gene ID= novel_gene_chr3_3369 TPM= 1.93 Transcript Type= NA
chr3	75421552	75435125	75421552	75435125	-	transcript3358.chr3.nnic@FAM86DP	transcript3358.chr3.nnic	transcribed_unprocessed_pseudogene	75434918,75432808,75430832,75429136,75426450,75421552	75435125,75432870,75430914,75429237,75426599,75423061	Gene ID= ENSG00000244026.6 TPM= 2.9 Transcript Type= NA
chr3	81489699	81762161	81489699	81762161	-	ENST00000429644.6@GBE1	ENST00000429644.6	protein_coding	81761375,81705444,81670838,81649796,81648856,81646392,81642781,81593908,81591037,81586092,81581165,81577925,81536911,81535195,81499110,81489699	81762161,81705613,81670953,81649921,81648991,81646482,81642990,81594023,81591164,81586190,81581275,81578096,81537095,81535325,81499227,81490463	Gene ID= ENSG00000114480.12 TPM= 898.19 Transcript Type= protein_coding
chr3	87227285	87255499	87227285	87255499	+	ENST00000263780.8@CHMP2B	ENST00000263780.8	protein_coding	87227285,87240699,87245714,87249875,87253404,87253712	87227556,87240790,87245908,87249977,87253510,87255499	Gene ID= ENSG00000083937.8 TPM= 47.3 Transcript Type= protein_coding
chr3	88055414	88059068	88055414	88059068	-	ENST00000482016.5@CGGBP1	ENST00000482016.5	protein_coding	88058815,88058019,88057191,88055414	88059068,88058223,88057292,88055999	Gene ID= ENSG00000163320.10 TPM= 3.86 Transcript Type= protein_coding
chr3	88051944	88059048	88051944	88059048	-	ENST00000309534.10@CGGBP1	ENST00000309534.10	protein_coding	88058815,88058019,88051944	88059048,88058223,88055999	Gene ID= ENSG00000163320.10 TPM= 8.69 Transcript Type= protein_coding
chr3	88059233	88142304	88059233	88142304	+	transcript3490.chr3.nnic@ZNF654	transcript3490.chr3.nnic	protein_coding	88059233,88086257,88113115,88128809,88129687,88135061,88138705,88141645	88059505,88086402,88113196,88129011,88129826,88135202,88141048,88142304	Gene ID= ENSG00000175105.6 TPM= 3.86 Transcript Type= NA
chr3	88059255	88142304	88059255	88142304	+	transcript3492.chr3.nnic@ZNF654	transcript3492.chr3.nnic	protein_coding	88059255,88086257,88113115,88129687,88135061,88138705,88141645	88059505,88086402,88113196,88129826,88135202,88141048,88142304	Gene ID= ENSG00000175105.6 TPM= 2.9 Transcript Type= NA
chr3	88059274	88144665	88059274	88144665	+	ENST00000636215.1@ZNF654	ENST00000636215.1	protein_coding	88059274,88086257,88113115,88126134,88128809,88129687,88135061,88138705,88141645	88059505,88086402,88113196,88126269,88129011,88129826,88135202,88141048,88144665	Gene ID= ENSG00000175105.6 TPM= 1.93 Transcript Type= protein_coding
chr3	88114301	88115610	88114301	88115610	-	transcript3508.chr3.nnic@NA	transcript3508.chr3.nnic	NA	88114301	88115610	Gene ID= novel_gene_chr3_3509 TPM= 1.93 Transcript Type= NA
chr3	88149743	88157968	88149743	88157968	+	ENST00000318887.7@C3orf38	ENST00000318887.7	protein_coding	88149743,88153230,88156021	88150185,88153471,88157968	Gene ID= ENSG00000179021.9 TPM= 12.55 Transcript Type= protein_coding
chr3	93873033	93974066	93873033	93974066	-	ENST00000394236.7@PROS1	ENST00000394236.7	protein_coding	93973674,93927250,93924240,93910619,93906021,93905784,93900804,93898448,93896576,93892933,93886336,93884728,93879163,93876966,93873033	93974066,93927407,93924264,93910705,93906143,93905915,93900929,93898569,93896691,93893122,93886503,93884896,93879314,93877191,93874405	Gene ID= ENSG00000184500.14 TPM= 1.93 Transcript Type= protein_coding
chr3	97822011	97875151	97822011	97875151	+	transcript3524.chr3.nic@CRYBG3	transcript3524.chr3.nic	protein_coding	97822011,97843195,97864217,97871842	97822355,97843261,97864647,97875151	Gene ID= ENSG00000080200.9 TPM= 7.72 Transcript Type= NA
chr3	97941818	97972457	97941818	97972457	-	ENST00000333396.11@RIOX2	ENST00000333396.11	protein_coding	97971914,97967162,97961589,97959051,97954392,97950786,97949844,97947361,97945798,97941818	97972457,97967632,97961708,97959179,97954495,97950888,97950015,97947449,97945887,97945342	Gene ID= ENSG00000170854.17 TPM= 1.93 Transcript Type= protein_coding
chr3	97944351	97972451	97944351	97972451	-	ENST00000394198.6@RIOX2	ENST00000394198.6	protein_coding	97972381,97967162,97961589,97959051,97954392,97950786,97949844,97947361,97945798,97944351	97972451,97967632,97961708,97959179,97954495,97950888,97950015,97947449,97945887,97945342	Gene ID= ENSG00000170854.17 TPM= 2.9 Transcript Type= protein_coding
chr3	97945338	97972451	97945338	97972451	-	transcript3548.chr3.nic@RIOX2	transcript3548.chr3.nic	protein_coding	97972381,97967162,97961589,97959051,97954392,97950786,97949844,97947361,97945338	97972451,97967632,97961708,97959179,97954495,97950888,97950015,97947449,97945887	Gene ID= ENSG00000170854.17 TPM= 3.86 Transcript Type= NA
chr3	98515483	98523018	98515483	98523018	-	ENST00000394181.6@CLDND1	ENST00000394181.6	protein_coding	98522849,98521653,98521133,98518885,98517052,98515483	98523018,98521696,98521442,98518995,98517189,98516879	Gene ID= ENSG00000080822.16 TPM= 1.93 Transcript Type= protein_coding
chr3	98515483	98522985	98515483	98522985	-	ENST00000394185.6@CLDND1	ENST00000394185.6	protein_coding	98522849,98521653,98521133,98518885,98517052,98515483	98522985,98521718,98521442,98518995,98517189,98516879	Gene ID= ENSG00000080822.16 TPM= 1.93 Transcript Type= protein_coding
chr3	98500788	98522927	98500788	98522927	-	transcript3557.chr3.nic@CLDND1	transcript3557.chr3.nic	protein_coding	98522849,98521133,98518885,98517052,98500788	98522927,98521442,98518995,98517189,98501520	Gene ID= ENSG00000080822.16 TPM= 8.69 Transcript Type= NA
chr3	98506474	98522927	98506474	98522927	-	transcript3559.chr3.nnic@CLDND1	transcript3559.chr3.nnic	protein_coding	98522849,98521133,98518885,98517052,98506474	98522927,98521442,98518995,98517189,98506747	Gene ID= ENSG00000080822.16 TPM= 4.83 Transcript Type= NA
chr3	98515473	98523043	98515473	98523043	-	ENST00000341181.10@CLDND1	ENST00000341181.10	protein_coding	98522849,98521133,98518885,98517052,98515473	98523043,98521442,98518995,98517189,98516879	Gene ID= ENSG00000080822.16 TPM= 15.44 Transcript Type= protein_coding
chr3	98500788	98522918	98500788	98522918	-	transcript3563.chr3.nic@CLDND1	transcript3563.chr3.nic	protein_coding	98522849,98518885,98517052,98500788	98522918,98518995,98517189,98501520	Gene ID= ENSG00000080822.16 TPM= 2.9 Transcript Type= NA
chr3	98579442	98593723	98579442	98593723	-	ENST00000264193.2@CPOX	ENST00000264193.2	protein_coding	98592949,98591012,98590632,98588713,98585441,98581407,98579442	98593723,98591155,98590742,98588854,98585659,98581511,98580770	Gene ID= ENSG00000080819.6 TPM= 13.51 Transcript Type= protein_coding
chr3	98732255	98794362	98732255	98794362	+	ENST00000483910.5@ST3GAL6	ENST00000483910.5	protein_coding	98732255,98768430,98770879,98772813,98773920,98784945,98788036,98788326,98791841,98793675	98732532,98768529,98770956,98772916,98773983,98785040,98788222,98788463,98791993,98794362	Gene ID= ENSG00000064225.12 TPM= 1.93 Transcript Type= protein_coding
chr3	99638475	99799226	99638475	99799226	+	ENST00000261037.7@COL8A1	ENST00000261037.7	protein_coding	99638475,99675660,99744897,99790680,99794230	99638664,99675721,99745021,99791010,99799226	Gene ID= ENSG00000144810.15 TPM= 1.93 Transcript Type= protein_coding
chr3	99638596	99796733	99638596	99796733	+	ENST00000273342.8@COL8A1	ENST00000273342.8	protein_coding	99638596,99744897,99790680,99794230	99638664,99745021,99791010,99796733	Gene ID= ENSG00000144810.15 TPM= 1.93 Transcript Type= protein_coding
chr3	99817866	100178603	99817866	100178603	+	transcript3589.chr3.nnic@CMSS1	transcript3589.chr3.nnic	protein_coding	99817866,100010131,100146973,100160430,100162303,100166335,100167738,100171839,100172316,100176327,100178305	99818043,100010180,100147061,100160501,100162432,100166394,100167840,100171899,100172403,100176415,100178603	Gene ID= ENSG00000184220.11 TPM= 55.02 Transcript Type= NA
chr3	99817837	100160455	99817837	100160455	+	ENST00000463526.1@CMSS1	ENST00000463526.1	protein_coding	99817837,100051232,100146973,100160430	99818043,100051306,100147061,100160455	Gene ID= ENSG00000184220.11 TPM= 18.34 Transcript Type= protein_coding
chr3	99847928	100114513	99847928	100114513	-	ENST00000331335.9@FILIP1L	ENST00000331335.9	protein_coding	100114053,99930769,99929856,99924230,99847928	100114513,99931030,99930029,99924408,99851070	Gene ID= ENSG00000168386.18 TPM= 2.9 Transcript Type= protein_coding
chr3	99847923	99876203	99847923	99876203	-	ENST00000383694.3@FILIP1L	ENST00000383694.3	protein_coding	99876072,99847923	99876203,99851070	Gene ID= ENSG00000168386.18 TPM= 21.24 Transcript Type= protein_coding
chr3	100261000	100325238	100261000	100325238	+	transcript3609.chr3.nnic@TBC1D23	transcript3609.chr3.nnic	protein_coding	100261000,100279649,100281742,100283607,100290578,100295087,100295302,100296172,100297923,100299239,100302067,100304846,100306437,100310403,100311833,100316099,100319069,100320777,100323587	100261071,100279760,100281847,100283811,100290715,100295211,100295348,100296275,100298045,100299331,100302237,100304888,100306543,100310542,100311877,100316187,100319204,100320971,100325238	Gene ID= ENSG00000036054.12 TPM= 3.38 Transcript Type= NA
chr3	100261012	100325238	100261012	100325238	+	ENST00000394144.8@TBC1D23	ENST00000394144.8	protein_coding	100261012,100279649,100281742,100283607,100290578,100295087,100295302,100296172,100297923,100299239,100302067,100304846,100306437,100310403,100311833,100316099,100319069,100320777,100323587	100261071,100279760,100281847,100283811,100290701,100295211,100295348,100296275,100298045,100299331,100302237,100304888,100306543,100310542,100311877,100316187,100319204,100320971,100325238	Gene ID= ENSG00000036054.12 TPM= 38.13 Transcript Type= protein_coding
chr3	100334701	100361635	100334701	100361635	+	ENST00000394140.8@NIT2	ENST00000394140.8	protein_coding	100334701,100339087,100339815,100341073,100345585,100346181,100348803,100352404,100354772,100355177	100334798,100339205,100339935,100341161,100345678,100346255,100348881,100352502,100354827,100361635	Gene ID= ENSG00000114021.11 TPM= 39.58 Transcript Type= protein_coding
chr3	100334757	100355351	100334757	100355351	+	transcript3619.chr3.nnic@NIT2	transcript3619.chr3.nnic	protein_coding	100334757,100339087,100339815,100341073,100345585,100348803,100349298,100352404,100354772,100355177	100334798,100339205,100339935,100341161,100346255,100348881,100349390,100352502,100354827,100355351	Gene ID= ENSG00000114021.11 TPM= 1.93 Transcript Type= NA
chr3	100334784	100355351	100334784	100355351	+	transcript3620.chr3.nic@NIT2	transcript3620.chr3.nic	protein_coding	100334784,100339087,100339815,100341073,100345585,100346181,100348803,100352404,100354772,100355177	100335112,100339205,100339935,100341161,100345678,100346255,100348881,100352502,100354827,100355351	Gene ID= ENSG00000114021.11 TPM= 11.58 Transcript Type= NA
chr3	100334739	100355351	100334739	100355351	+	ENST00000465368.5@NIT2	ENST00000465368.5	protein_coding	100334739,100339087,100339815,100341073,100345585,100348803,100352404,100354772,100355177	100334798,100339205,100339935,100341161,100346255,100348881,100352502,100354827,100355351	Gene ID= ENSG00000114021.11 TPM= 8.69 Transcript Type= retained_intron
chr3	100363431	100401398	100363431	100401398	-	ENST00000284320.5@TOMM70	ENST00000284320.5	protein_coding	100400626,100386805,100386218,100384479,100381615,100377705,100375018,100373538,100372606,100369038,100368044,100363431	100401398,100386978,100386344,100384588,100381763,100377912,100375152,100373645,100372722,100369135,100368166,100365717	Gene ID= ENSG00000154174.7 TPM= 147.69 Transcript Type= protein_coding
chr3	100709425	100748966	100709425	100748966	+	ENST00000240851.8@TFG	ENST00000240851.8	protein_coding	100709425,100713643,100719975,100728712,100732508,100736576,100744833,100748149	100709721,100713869,100720058,100728858,100732672,100736716,100744931,100748966	Gene ID= ENSG00000114354.13 TPM= 106.67 Transcript Type= protein_coding
chr3	100709606	100748964	100709606	100748964	+	ENST00000476228.5@TFG	ENST00000476228.5	protein_coding	100709606,100713643,100719975,100728712,100732508,100736576,100744833,100748149	100709721,100713869,100720058,100728858,100732672,100736704,100744931,100748964	Gene ID= ENSG00000114354.13 TPM= 5.79 Transcript Type= protein_coding
chr3	101324273	101513205	101324273	101513205	-	ENST00000394094.6@SENP7	ENST00000394094.6	protein_coding	101513091,101501070,101493873,101458955,101417593,101372008,101367830,101366430,101364834,101361715,101351618,101347872,101343686,101341646,101340095,101337509,101332770,101331985,101330334,101328646,101328478,101327666,101324273	101513205,101501119,101493968,101459052,101417790,101372126,101368011,101366769,101364991,101361861,101351651,101348051,101343954,101341779,101340211,101337631,101332862,101332109,101330386,101328689,101328546,101327816,101326080	Gene ID= ENSG00000138468.15 TPM= 3.86 Transcript Type= protein_coding
chr3	101561862	101566446	101561862	101566446	+	ENST00000309922.6@TRMT10C	ENST00000309922.6	protein_coding	101561862,101564770	101562003,101566446	Gene ID= ENSG00000174173.6 TPM= 9.65 Transcript Type= protein_coding
chr3	101574095	101594437	101574095	101594437	+	ENST00000265260.7@PCNP	ENST00000265260.7	protein_coding	101574095,101579790,101585437,101590215,101592627	101574279,101580004,101585511,101590270,101594437	Gene ID= ENSG00000081154.11 TPM= 134.74 Transcript Type= protein_coding
chr3	101574190	101594407	101574190	101594407	+	ENST00000460231.5@PCNP	ENST00000460231.5	protein_coding	101574190,101579842,101585437,101590215,101592627	101574279,101580004,101585511,101590270,101594407	Gene ID= ENSG00000081154.11 TPM= 89.77 Transcript Type= nonsense_mediated_decay
chr3	101574194	101594437	101574194	101594437	+	ENST00000469941.5@PCNP	ENST00000469941.5	protein_coding	101574194,101585437,101590215,101592627	101574279,101585511,101590270,101594437	Gene ID= ENSG00000081154.11 TPM= 12.63 Transcript Type= protein_coding
chr3	101648889	101677495	101648889	101677495	-	ENST00000312938.4@ZBTB11	ENST00000312938.4	protein_coding	101676605,101671978,101671130,101664964,101664538,101659783,101656104,101654704,101652780,101652496,101648889	101677495,101672213,101671361,101665808,101664714,101660028,101656248,101654821,101652938,101652671,101651683	Gene ID= ENSG00000066422.4 TPM= 10.62 Transcript Type= protein_coding
chr3	101676411	101678758	101676411	101678758	+	transcript3679.chr3.nnic@NA	transcript3679.chr3.nnic	NA	101676411	101678758	Gene ID= novel_gene_chr3_3680 TPM= 3.86 Transcript Type= NA
chr3	101676451	101687946	101676451	101687946	+	transcript3674.chr3.nnic@ZBTB11-AS1	transcript3674.chr3.nnic	antisense_RNA	101676451,101684895,101685849	101677272,101685322,101687946	Gene ID= ENSG00000256628.3 TPM= 1.93 Transcript Type= NA
chr3	101681092	101686782	101681092	101686782	-	ENST00000394077.7@RPL24	ENST00000394077.7	protein_coding	101686672,101686482,101685818,101682771,101682429,101681092	101686782,101686557,101685928,101682907,101682492,101681215	Gene ID= ENSG00000114391.12 TPM= 245.99 Transcript Type= protein_coding
chr3	101681091	101686712	101681091	101686712	-	ENST00000464595.1@RPL24	ENST00000464595.1	protein_coding	101686482,101685818,101682771,101682429,101681091	101686712,101685928,101682907,101682492,101681215	Gene ID= ENSG00000114391.12 TPM= 16.25 Transcript Type= retained_intron
chr3	101681096	101686705	101681096	101686705	-	ENST00000495401.5@RPL24	ENST00000495401.5	protein_coding	101686672,101686482,101685818,101682771,101681096	101686705,101686557,101685928,101682907,101681215	Gene ID= ENSG00000114391.12 TPM= 1.28 Transcript Type= protein_coding
chr3	101779202	101822934	101779202	101822934	+	transcript3689.chr3.nnic@NXPE3	transcript3689.chr3.nnic	protein_coding	101779202,101779683,101782110,101782660,101785402,101801235,101807053,101816795,101821404	101779324,101779900,101782290,101782780,101785689,101801989,101807126,101817001,101822934	Gene ID= ENSG00000144815.15 TPM= 4.83 Transcript Type= NA
chr3	101779202	101822825	101779202	101822825	+	transcript3690.chr3.nnic@NXPE3	transcript3690.chr3.nnic	protein_coding	101779202,101779683,101782110,101782660,101785402,101801235,101807053,101816795,101821404	101779324,101779934,101782290,101782780,101785689,101801989,101807126,101817001,101822825	Gene ID= ENSG00000144815.15 TPM= 4.51 Transcript Type= NA
chr3	101779442	101827392	101779442	101827392	+	ENST00000491511.6@NXPE3	ENST00000491511.6	protein_coding	101779442,101782110,101782660,101785402,101801235,101807053,101816795,101821404	101779900,101782290,101782780,101785689,101801989,101807126,101817001,101827392	Gene ID= ENSG00000144815.15 TPM= 5.79 Transcript Type= protein_coding
chr3	101779150	101824123	101779150	101824123	+	transcript3716.chr3.nnic@NXPE3	transcript3716.chr3.nnic	protein_coding	101779150,101782110,101782660,101785402,101801235,101807053,101821404	101779324,101782290,101782780,101785689,101801989,101807126,101824123	Gene ID= ENSG00000144815.15 TPM= 5.79 Transcript Type= NA
chr3	101779230	101823623	101779230	101823623	+	ENST00000273347.9@NXPE3	ENST00000273347.9	protein_coding	101779230,101782110,101782660,101785402,101801235,101807053,101816795,101821404	101779324,101782290,101782780,101785689,101801989,101807126,101817001,101823623	Gene ID= ENSG00000144815.15 TPM= 3.86 Transcript Type= protein_coding
chr3	107522961	107806342	107522961	107806342	+	ENST00000402543.5@BBX	ENST00000402543.5	protein_coding	107522961,107526327,107645836,107661828,107710452,107716607,107728765,107732956,107744630,107747965,107755598,107772628,107774719,107778371,107798523,107801095,107805370	107523107,107526398,107645909,107661944,107710622,107716849,107728960,107733023,107744710,107748039,107755678,107773636,107774857,107778519,107798720,107801281,107806342	Gene ID= ENSG00000114439.18 TPM= 1.93 Transcript Type= protein_coding
chr3	107809609	107811205	107809609	107811205	+	transcript3745.chr3.nnic@NA	transcript3745.chr3.nnic	NA	107809609	107811205	Gene ID= novel_gene_chr3_3746 TPM= 1.93 Transcript Type= NA
chr3	108160812	108222570	108160812	108222570	-	ENST00000264538.3@IFT57	ENST00000264538.3	protein_coding	108222111,108219410,108218535,108213931,108206628,108191521,108167793,108166854,108165431,108163663,108160812	108222570,108219572,108218653,108214021,108206696,108191643,108167864,108166985,108165493,108163729,108162655	Gene ID= ENSG00000114446.4 TPM= 4.83 Transcript Type= protein_coding
chr3	108554376	108589645	108554376	108589645	-	transcript3759.chr3.nic@KIAA1524	transcript3759.chr3.nic	protein_coding	108589274,108585065,108582977,108582108,108581415,108579566,108579281,108576271,108569389,108568155,108566497,108565355,108563126,108560649,108559954,108559757,108557218,108554376	108589645,108585212,108583083,108582202,108581511,108579688,108579426,108576346,108569607,108568314,108566638,108565454,108563244,108560841,108560028,108559867,108557414,108554489	Gene ID= ENSG00000163507.13 TPM= 1.93 Transcript Type= NA
chr3	108589705	108648112	108589705	108648112	+	transcript3761.chr3.nic@DZIP3	transcript3761.chr3.nic	protein_coding	108589705,108605335,108608089,108611174,108616541,108624444,108625845,108629062,108632953,108634871,108636616,108637496,108642438,108644164,108646617,108647943	108589839,108605438,108608158,108611329,108616657,108624524,108625969,108629176,108633072,108634972,108636708,108637548,108642514,108644781,108646649,108648112	Gene ID= ENSG00000198919.12 TPM= 1.93 Transcript Type= NA
chr3	108589682	108694846	108589682	108694846	+	ENST00000361582.7@DZIP3	ENST00000361582.7	protein_coding	108589682,108605335,108608089,108611174,108616541,108624444,108625845,108629062,108632953,108634871,108636616,108637496,108642438,108644164,108646617,108647943,108648918,108651137,108654145,108661877,108662130,108669681,108672560,108674078,108675786,108677497,108684216,108686445,108687976,108688593,108688823,108690787,108693360	108589839,108605438,108608158,108611329,108616657,108624524,108625969,108629176,108633072,108634972,108636708,108637548,108642514,108644781,108646649,108648112,108648962,108651162,108654310,108661972,108662257,108669749,108672656,108674181,108675873,108677598,108684341,108686584,108688096,108688736,108688924,108690903,108694846	Gene ID= ENSG00000198919.12 TPM= 1.93 Transcript Type= protein_coding
chr3	111071743	111135954	111071743	111135954	+	ENST00000485303.5@NECTIN3	ENST00000485303.5	protein_coding	111071743,111112030,111118656,111122121,111126184,111133635	111072177,111112371,111118952,111122238,111126335,111135954	Gene ID= ENSG00000177707.10 TPM= 1.93 Transcript Type= protein_coding
chr3	111979035	111993363	111979035	111993363	+	ENST00000273359.7@ABHD10	ENST00000273359.7	protein_coding	111979035,111981784,111986264,111986914,111991377	111979203,111981967,111986375,111987051,111993363	Gene ID= ENSG00000144827.8 TPM= 16.41 Transcript Type= protein_coding
chr3	112086349	112118210	112086349	112118210	+	ENST00000264848.9@C3orf52	ENST00000264848.9	protein_coding	112086349,112093360,112102838,112109543,112112964,112116642	112086545,112093489,112102965,112109613,112113145,112118210	Gene ID= ENSG00000114529.12 TPM= 6.76 Transcript Type= protein_coding
chr3	112333178	112362809	112333178	112362809	+	ENST00000478595.1@CD200	ENST00000478595.1	protein_coding	112333178,112344962,112347563,112349712,112361543	112333224,112345288,112347830,112349819,112362809	Gene ID= ENSG00000091972.18 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr3	112532509	112561963	112532509	112561963	-	ENST00000283290.9@ATG3	ENST00000283290.9	protein_coding	112561457,112558376,112553280,112550192,112548533,112544057,112541803,112538146,112537735,112536475,112534269,112532509	112561963,112558417,112553329,112550262,112548640,112544106,112541884,112538180,112537890,112536602,112534337,112532780	Gene ID= ENSG00000144848.10 TPM= 71.43 Transcript Type= protein_coding
chr3	112532509	112561934	112532509	112561934	-	transcript3781.chr3.nic@ATG3	transcript3781.chr3.nic	protein_coding	112561846,112558376,112553280,112550192,112548533,112544057,112541803,112538146,112537735,112536475,112534269,112532509	112561934,112558417,112553329,112550262,112548640,112544106,112541884,112538180,112537890,112536602,112534337,112532780	Gene ID= ENSG00000144848.10 TPM= 5.79 Transcript Type= NA
chr3	112638260	112641465	112638260	112641465	-	transcript3787.chr3.nic@CCDC80	transcript3787.chr3.nic	protein_coding	112640327,112638260	112641465,112639916	Gene ID= ENSG00000091986.15 TPM= 5.79 Transcript Type= NA
chr3	112990996	113015258	112990996	113015258	+	transcript3800.chr3.nnic@GTPBP8	transcript3800.chr3.nnic	protein_coding	112990996,112993026,112995135,112996892,112999446,113014377	112991335,112993124,112995265,112996991,112999559,113015258	Gene ID= ENSG00000163607.15 TPM= 1.93 Transcript Type= NA
chr3	112990918	113001342	112990918	113001342	+	ENST00000383678.6@GTPBP8	ENST00000383678.6	protein_coding	112990918,112993026,112995135,112996892,112999446,113000850	112991335,112993124,112995265,112996991,112999564,113001342	Gene ID= ENSG00000163607.15 TPM= 6.76 Transcript Type= protein_coding
chr3	113002440	113019839	113002440	113019839	-	ENST00000314400.9@NEPRO	ENST00000314400.9	protein_coding	113019542,113017448,113013953,113013272,113012734,113011045,113010643,113008171,113002440	113019839,113017602,113014032,113013403,113012811,113011406,113010704,113008430,113006004	Gene ID= ENSG00000163608.14 TPM= 2.9 Transcript Type= protein_coding
chr3	113004917	113019660	113004917	113019660	-	transcript3791.chr3.nic@NEPRO	transcript3791.chr3.nic	protein_coding	113019542,113013953,113013272,113012734,113011045,113010643,113009498,113008171,113004917	113019660,113014032,113013403,113012811,113011406,113010704,113009584,113008430,113006004	Gene ID= ENSG00000163608.14 TPM= 6.76 Transcript Type= NA
chr3	113002444	113019733	113002444	113019733	-	ENST00000383675.6@NEPRO	ENST00000383675.6	protein_coding	113019542,113017448,113013953,113011045,113010643,113008171,113002444	113019733,113017602,113014032,113011406,113010704,113008430,113006004	Gene ID= ENSG00000163608.14 TPM= 1.93 Transcript Type= protein_coding
chr3	113211482	113287459	113211482	113287459	+	ENST00000495514.5@BOC	ENST00000495514.5	protein_coding	113211482,113216187,113249722,113250555,113268299,113270801,113272410,113273069,113274375,113278098,113278673,113279249,113279824,113280558,113281031,113283411,113284335,113284782,113285372,113286675	113212016,113216274,113249899,113250833,113268445,113270944,113272703,113273341,113274682,113278257,113278783,113279455,113280005,113280663,113281153,113283632,113284567,113284858,113285565,113287459	Gene ID= ENSG00000144857.14 TPM= 6.76 Transcript Type= protein_coding
chr3	113648385	113696646	113648385	113696646	-	ENST00000316407.8@USF3	ENST00000316407.8	protein_coding	113696370,113677282,113674832,113673348,113670121,113664313,113648385	113696646,113677397,113674896,113673376,113670203,113664409,113661425	Gene ID= ENSG00000176542.9 TPM= 29.92 Transcript Type= protein_coding
chr3	113716460	113746274	113716460	113746274	-	ENST00000240922.7@NAA50	ENST00000240922.7	protein_coding	113745942,113723959,113723422,113722906,113716460	113746274,113724095,113723541,113722972,113721937	Gene ID= ENSG00000121579.12 TPM= 4.83 Transcript Type= protein_coding
chr3	113721590	113746249	113721590	113746249	-	ENST00000481432.5@NAA50	ENST00000481432.5	protein_coding	113745942,113723981,113723422,113722906,113721590	113746249,113724095,113723541,113722972,113721937	Gene ID= ENSG00000121579.12 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr3	113721656	113746300	113721656	113746300	-	ENST00000493900.5@NAA50	ENST00000493900.5	protein_coding	113745942,113723959,113723422,113722906,113721656	113746300,113724092,113723541,113722972,113721937	Gene ID= ENSG00000121579.12 TPM= 13.51 Transcript Type= protein_coding
chr3	113747019	113812056	113747019	113812056	+	ENST00000273398.7@ATP6V1A	ENST00000273398.7	protein_coding	113747019,113778741,113781050,113784224,113784696,113786232,113788713,113789732,113794872,113795090,113795876,113798243,113803583,113805354,113809335	113747113,113778835,113781178,113784438,113784833,113786383,113788875,113789840,113794994,113795204,113795939,113798446,113803677,113805525,113812056	Gene ID= ENSG00000114573.9 TPM= 8.69 Transcript Type= protein_coding
chr3	114056735	114088349	114056735	114088349	+	ENST00000485050.5@QTRT2	ENST00000485050.5	protein_coding	114056735,114065237,114066228,114067987,114070626,114076743,114079906,114082677,114085673	114056864,114065457,114066283,114068063,114070838,114076942,114080057,114082794,114088349	Gene ID= ENSG00000151576.10 TPM= 3.86 Transcript Type= protein_coding
chr3	114338652	115147266	114338652	115147266	-	transcript3859.chr3.nnic@ZBTB20	transcript3859.chr3.nnic	protein_coding	115147219,115071219,114974366,114900304,114801101,114693528,114500352,114389005,114380777,114380217,114350274,114338652	115147266,115071414,114974416,114900342,114801174,114693575,114500391,114389105,114380940,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 6.56 Transcript Type= NA
chr3	114338652	115147266	114338652	115147266	-	transcript3866.chr3.nnic@ZBTB20	transcript3866.chr3.nnic	protein_coding	115147219,115071219,114974366,114900304,114801101,114693528,114500352,114389005,114380217,114350274,114338652	115147266,115071414,114974416,114900342,114801174,114693575,114500391,114389105,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 7.53 Transcript Type= NA
chr3	114338652	114624988	114338652	114624988	-	transcript3877.chr3.nic@ZBTB20	transcript3877.chr3.nic	protein_coding	114624877,114500352,114389005,114380777,114380217,114350274,114338652	114624988,114500391,114389105,114380940,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 8.49 Transcript Type= NA
chr3	114338652	114624968	114338652	114624968	-	transcript3879.chr3.nnic@ZBTB20	transcript3879.chr3.nnic	protein_coding	114624877,114624116,114500352,114389005,114380217,114350274,114338652	114624968,114624243,114500391,114389105,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 7.53 Transcript Type= NA
chr3	114488322	115147329	114488322	115147329	-	transcript3880.chr3.nnic@ZBTB20	transcript3880.chr3.nnic	protein_coding	115147219,114974366,114900304,114801101,114693528,114500352,114488322	115147329,114974416,114900342,114801174,114693575,114500391,114488982	Gene ID= ENSG00000181722.16 TPM= 1.93 Transcript Type= NA
chr3	114338652	114624206	114338652	114624206	-	ENST00000481632.5@ZBTB20	ENST00000481632.5	protein_coding	114624116,114500352,114389005,114380217,114350274,114338652	114624206,114500391,114389105,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 6.56 Transcript Type= protein_coding
chr3	114711630	114721870	114711630	114721870	+	transcript3883.chr3.nnic@NA	transcript3883.chr3.nnic	NA	114711630,114711935,114721719	114711704,114712071,114721870	Gene ID= novel_gene_chr3_3884 TPM= 1.93 Transcript Type= NA
chr3	119211742	119241103	119211742	119241103	-	ENST00000393765.6@B4GALT4	ENST00000393765.6	protein_coding	119240850,119236853,119229847,119226809,119224058,119218650,119216240,119211742	119241103,119237070,119230244,119227041,119224245,119218772,119216344,119212681	Gene ID= ENSG00000121578.12 TPM= 4.83 Transcript Type= protein_coding
chr3	119415572	119417717	119415572	119417717	+	transcript3897.chr3.nnic@NA	transcript3897.chr3.nnic	NA	119415572	119417717	Gene ID= novel_gene_chr3_3898 TPM= 1.93 Transcript Type= NA
chr3	119429500	119463682	119429500	119463682	-	ENST00000319172.9@TMEM39A	ENST00000319172.9	protein_coding	119463336,119461962,119458018,119452447,119447018,119437755,119436791,119434762,119429500	119463682,119462148,119458240,119452530,119447172,119438103,119436978,119434882,119432214	Gene ID= ENSG00000176142.12 TPM= 2.9 Transcript Type= protein_coding
chr3	119498532	119525090	119498532	119525090	+	ENST00000494664.5@TIMMDC1	ENST00000494664.5	protein_coding	119498532,119500695,119503532,119503954,119513641,119517205,119523606	119498927,119500860,119503620,119504021,119513719,119517315,119525090	Gene ID= ENSG00000113845.9 TPM= 1.93 Transcript Type= protein_coding
chr3	119498561	119524061	119498561	119524061	+	transcript3919.chr3.nic@TIMMDC1	transcript3919.chr3.nic	protein_coding	119498561,119513641,119517205,119523606	119498927,119513719,119517315,119524061	Gene ID= ENSG00000113845.9 TPM= 2.9 Transcript Type= NA
chr3	119579454	119589945	119579454	119589945	+	transcript3923.chr3.nic@ADPRH	transcript3923.chr3.nic	protein_coding	119579454,119580485,119582134,119586285,119587464	119579851,119580636,119582467,119586645,119589945	Gene ID= ENSG00000144843.11 TPM= 7.72 Transcript Type= NA
chr3	119579676	119589945	119579676	119589945	+	ENST00000357003.7@ADPRH	ENST00000357003.7	protein_coding	119579676,119580551,119582134,119586285,119587464	119579851,119580636,119582467,119586645,119589945	Gene ID= ENSG00000144843.11 TPM= 13.51 Transcript Type= protein_coding
chr3	119642059	119660706	119642059	119660706	-	transcript3931.chr3.nic@POPDC2	transcript3931.chr3.nic	protein_coding	119660520,119659933,119654505,119648260,119642059	119660706,119660063,119654613,119648668,119642561	Gene ID= ENSG00000121577.13 TPM= 2.9 Transcript Type= NA
chr3	119642060	119660706	119642060	119660706	-	transcript3932.chr3.nic@POPDC2	transcript3932.chr3.nic	protein_coding	119660520,119659933,119654505,119648119,119642060	119660706,119660063,119654613,119648668,119642561	Gene ID= ENSG00000121577.13 TPM= 25.1 Transcript Type= NA
chr3	119642059	119665324	119642059	119665324	-	ENST00000474523.5@POPDC2	ENST00000474523.5	protein_coding	119665251,119659933,119654505,119648260,119643367,119642059	119665324,119660063,119654613,119648668,119643449,119642561	Gene ID= ENSG00000121577.13 TPM= 1.93 Transcript Type= processed_transcript
chr3	119642052	119643270	119642052	119643270	-	transcript3941.chr3.nnic@POPDC2	transcript3941.chr3.nnic	protein_coding	119643049,119642052	119643270,119642561	Gene ID= ENSG00000121577.13 TPM= 4.83 Transcript Type= NA
chr3	119642059	119660590	119642059	119660590	-	ENST00000264231.7@POPDC2	ENST00000264231.7	protein_coding	119659933,119654505,119648260,119642059	119660590,119654613,119648668,119642561	Gene ID= ENSG00000121577.13 TPM= 10.62 Transcript Type= protein_coding
chr3	119669532	119677346	119669532	119677346	-	ENST00000484810.5@COX17	ENST00000484810.5	protein_coding	119677204,119676862,119675145,119669532	119677346,119676966,119675233,119669665	Gene ID= ENSG00000138495.6 TPM= 9.65 Transcript Type= protein_coding
chr3	119826701	120094392	119826701	120094392	-	transcript3951.chr3.nic@GSK3B	transcript3951.chr3.nic	protein_coding	120093347,120002046,119947268,119923373,119916044,119912704,119905755,119876413,119863419,119826701	120094392,120002239,119947351,119923483,119916174,119912810,119905852,119876508,119863605,119826855	Gene ID= ENSG00000082701.14 TPM= 5.31 Transcript Type= NA
chr3	120000919	120094392	120000919	120094392	-	transcript3953.chr3.nic@GSK3B	transcript3953.chr3.nic	protein_coding	120093347,120000919	120094392,120002239	Gene ID= ENSG00000082701.14 TPM= 2.41 Transcript Type= NA
chr3	119821953	119823632	119821953	119823632	-	transcript3954.chr3.nnic@NA	transcript3954.chr3.nnic	NA	119821953	119823632	Gene ID= novel_gene_chr3_3955 TPM= 3.86 Transcript Type= NA
chr3	120394279	120450992	120394279	120450992	-	transcript3961.chr3.nnic@FSTL1	transcript3961.chr3.nnic	protein_coding	120450897,120450684,120415923,120411854,120410952,120409532,120404853,120403242,120402808,120399883,120396959,120394279	120450992,120450746,120416027,120411983,120410984,120409662,120404971,120403354,120402918,120399959,120396996,120396662	Gene ID= ENSG00000163430.11 TPM= 5.79 Transcript Type= NA
chr3	120596324	120602328	120596324	120602328	+	transcript3968.chr3.nnic@NDUFB4	transcript3968.chr3.nnic	protein_coding	120596324,120601173,120602208	120596539,120601257,120602328	Gene ID= ENSG00000065518.7 TPM= 11.1 Transcript Type= NA
chr3	120596357	120602328	120596357	120602328	+	ENST00000491335.1@NDUFB4	ENST00000491335.1	protein_coding	120596357,120601111,120602208	120596646,120601257,120602328	Gene ID= ENSG00000065518.7 TPM= 12.07 Transcript Type= nonsense_mediated_decay
chr3	120686681	120742537	120686681	120742537	-	ENST00000273375.7@RABL3	ENST00000273375.7	protein_coding	120742462,120730696,120709780,120706000,120698423,120694153,120690449,120686681	120742537,120730787,120709909,120706114,120698573,120694224,120690487,120689888	Gene ID= ENSG00000144840.8 TPM= 6.76 Transcript Type= protein_coding
chr3	120742824	120783069	120742824	120783069	+	transcript3983.chr3.nnic@GTF2E1	transcript3983.chr3.nnic	protein_coding	120742824,120750523,120770728,120776423,120781043	120742971,120751000,120770929,120776664,120783069	Gene ID= ENSG00000153767.9 TPM= 1.93 Transcript Type= NA
chr3	120742732	120783069	120742732	120783069	+	ENST00000283875.5@GTF2E1	ENST00000283875.5	protein_coding	120742732,120750523,120770728,120776423,120781043	120742794,120751000,120770929,120776664,120783069	Gene ID= ENSG00000153767.9 TPM= 15.44 Transcript Type= protein_coding
chr3	121593119	121630295	121593119	121630295	+	ENST00000338040.5@FBXO40	ENST00000338040.5	protein_coding	121593119,121620546,121621433,121626695	121593502,121620578,121623343,121630295	Gene ID= ENSG00000163833.7 TPM= 80.12 Transcript Type= protein_coding
chr3	121631399	121660911	121631399	121660911	-	ENST00000314583.7@HCLS1	ENST00000314583.7	protein_coding	121660820,121658264,121657279,121647319,121644818,121642927,121637146,121636434,121635735,121634207,121633067,121632332,121632101,121631399	121660911,121658347,121657352,121647448,121644928,121642981,121637256,121636489,121635804,121634418,121633171,121632563,121632184,121631982	Gene ID= ENSG00000180353.10 TPM= 12.55 Transcript Type= protein_coding
chr3	121663203	121749740	121663203	121749740	-	ENST00000393667.7@GOLGB1	ENST00000393667.7	protein_coding	121749632,121730876,121729865,121729188,121726913,121722262,121719646,121718388,121716737,121714861,121702481,121699812,121693741,121690670,121681687,121677285,121676893,121669197,121668061,121667476,121664926,121663203	121749740,121730973,121730017,121729340,121727041,121722378,121719768,121718501,121717139,121714976,121702595,121699885,121698929,121692581,121681865,121677450,121677030,121669355,121668158,121667610,121665031,121664614	Gene ID= ENSG00000173230.15 TPM= 3.38 Transcript Type= protein_coding
chr3	121663199	121749755	121663199	121749755	-	ENST00000340645.9@GOLGB1	ENST00000340645.9	protein_coding	121749632,121730876,121729865,121729188,121726913,121722262,121719646,121718388,121716737,121714861,121702481,121699812,121693741,121690670,121681687,121677285,121676893,121669212,121668061,121667476,121664926,121663199	121749755,121730973,121730017,121729340,121727041,121722378,121719753,121718501,121717139,121714976,121702595,121699885,121698929,121692581,121681865,121677450,121677030,121669355,121668158,121667610,121665031,121664614	Gene ID= ENSG00000173230.15 TPM= 1.45 Transcript Type= protein_coding
chr3	121663203	121749767	121663203	121749767	-	ENST00000614479.4@GOLGB1	ENST00000614479.4	protein_coding	121749632,121730848,121729865,121729188,121726913,121722262,121718388,121716737,121714861,121702481,121699812,121693741,121690670,121681687,121677285,121676893,121669212,121668061,121667476,121664926,121663203	121749767,121730973,121730017,121729340,121727041,121722378,121718501,121717139,121714976,121702595,121699885,121698929,121692581,121681865,121677450,121677030,121669355,121668158,121667610,121665031,121664614	Gene ID= ENSG00000173230.15 TPM= 1.93 Transcript Type= protein_coding
chr3	121769763	121835079	121769763	121835079	-	ENST00000310864.10@IQCB1	ENST00000310864.10	protein_coding	121834966,121834391,121828861,121828470,121826051,121808916,121807344,121799196,121797118,121795457,121790073,121788284,121781743,121772557,121769763	121835079,121834479,121828972,121828632,121826180,121809009,121807443,121799374,121797227,121795566,121790215,121788432,121781874,121772713,121770574	Gene ID= ENSG00000173226.16 TPM= 5.79 Transcript Type= protein_coding
chr3	121835223	121886526	121835223	121886526	+	transcript4032.chr3.nic@EAF2	transcript4032.chr3.nic	protein_coding	121835223,121836645,121844453,121857011,121872537,121886342	121835391,121836794,121844547,121857156,121872788,121886526	Gene ID= ENSG00000145088.8 TPM= 1.93 Transcript Type= NA
chr3	122359591	122383231	122359591	122383231	-	ENST00000291458.9@CCDC58	ENST00000291458.9	protein_coding	122383174,122371675,122368176,122362968,122359591	122383231,122371800,122368322,122363027,122359919	Gene ID= ENSG00000160124.9 TPM= 17.38 Transcript Type= protein_coding
chr3	122359600	122383231	122359600	122383231	-	ENST00000497726.5@CCDC58	ENST00000497726.5	protein_coding	122383174,122362968,122359600	122383231,122363027,122359919	Gene ID= ENSG00000160124.9 TPM= 7.72 Transcript Type= protein_coding
chr3	122384161	122409999	122384161	122409999	+	transcript4044.chr3.nnic@FAM162A	transcript4044.chr3.nnic	protein_coding	122384161,122402760,122407281,122409739	122384299,122402882,122407389,122409999	Gene ID= ENSG00000114023.15 TPM= 8.69 Transcript Type= NA
chr3	122384182	122412334	122384182	122412334	+	ENST00000477892.5@FAM162A	ENST00000477892.5	protein_coding	122384182,122402760,122404258,122407281,122409739	122384299,122402882,122404363,122407389,122412334	Gene ID= ENSG00000114023.15 TPM= 13.51 Transcript Type= protein_coding
chr3	122414027	122416454	122414027	122416454	-	transcript4046.chr3.nnic@NA	transcript4046.chr3.nnic	NA	122414027	122416454	Gene ID= novel_gene_chr3_4047 TPM= 16.41 Transcript Type= NA
chr3	122421949	122514928	122421949	122514928	-	ENST00000344337.10@KPNA1	ENST00000344337.10	protein_coding	122514757,122496437,122467322,122463942,122461224,122453870,122451976,122451534,122449574,122442038,122437170,122433661,122427538,122421949	122514928,122496570,122467429,122464041,122461318,122454001,122452064,122451633,122449737,122442116,122437295,122433788,122427716,122427172	Gene ID= ENSG00000114030.12 TPM= 29.08 Transcript Type= protein_coding
chr3	122426104	122460657	122426104	122460657	-	ENST00000466923.5@KPNA1	ENST00000466923.5	protein_coding	122459774,122459439,122457726,122453870,122451976,122451534,122449574,122442038,122437170,122433661,122427538,122426104	122460657,122459681,122457848,122454001,122452064,122451633,122449737,122442116,122437295,122433788,122427716,122427172	Gene ID= ENSG00000114030.12 TPM= 3.01 Transcript Type= processed_transcript
chr3	122527924	122564287	122527924	122564287	-	transcript4092.chr3.nnic@PARP9	transcript4092.chr3.nnic	protein_coding	122564245,122559606,122558434,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527924	122564287,122559706,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743	Gene ID= ENSG00000138496.16 TPM= 6.76 Transcript Type= NA
chr3	122531773	122564315	122531773	122564315	-	ENST00000462315.5@PARP9	ENST00000462315.5	protein_coding	122564111,122559606,122558434,122555286,122552418,122550584,122545432,122540472,122536934,122531773	122564315,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342	Gene ID= ENSG00000138496.16 TPM= 1.93 Transcript Type= protein_coding
chr3	122527924	122564577	122527924	122564577	-	ENST00000477522.6@PARP9	ENST00000477522.6	protein_coding	122564439,122559606,122558434,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527924	122564577,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743	Gene ID= ENSG00000138496.16 TPM= 2.9 Transcript Type= protein_coding
chr3	122564238	122575203	122564238	122575203	+	ENST00000296161.8@DTX3L	ENST00000296161.8	protein_coding	122564238,122565859,122568489,122570455,122571678	122564613,122566070,122570024,122570672,122575203	Gene ID= ENSG00000163840.9 TPM= 18.34 Transcript Type= protein_coding
chr3	122761616	122793804	122761616	122793804	-	transcript4124.chr3.nic@HSPBAP1	transcript4124.chr3.nic	protein_coding	122793617,122777721,122768701,122761616	122793804,122777906,122768882,122761972	Gene ID= ENSG00000169087.10 TPM= 1.93 Transcript Type= NA
chr3	122740003	122793824	122740003	122793824	-	ENST00000306103.2@HSPBAP1	ENST00000306103.2	protein_coding	122793617,122777721,122768701,122759224,122755260,122752591,122741003,122740003	122793824,122777906,122768882,122759360,122755431,122752674,122741113,122740875	Gene ID= ENSG00000169087.10 TPM= 6.76 Transcript Type= protein_coding
chr3	122755324	122793759	122755324	122793759	-	ENST00000467643.5@HSPBAP1	ENST00000467643.5	protein_coding	122793617,122777721,122768701,122759224,122758772,122755324	122793759,122777906,122768882,122759360,122758853,122755431	Gene ID= ENSG00000169087.10 TPM= 1.93 Transcript Type= processed_transcript
chr3	122794795	122881139	122794795	122881139	+	ENST00000261038.5@DIRC2	ENST00000261038.5	protein_coding	122794795,122806857,122826800,122833317,122845763,122856307,122860075,122872415,122879263	122795535,122806950,122827065,122833446,122845871,122856374,122860202,122872597,122881139	Gene ID= ENSG00000138463.8 TPM= 12.55 Transcript Type= protein_coding
chr3	123067070	123162104	123067070	123162104	+	ENST00000316218.11@PDIA5	ENST00000316218.11	protein_coding	123067070,123089168,123092355,123102411,123102751,123106749,123110944,123116231,123124066,123124272,123130480,123145522,123146099,123150234,123154971,123161321,123161880	123067206,123089294,123092442,123102494,123102796,123106841,123111004,123116298,123124157,123124343,123130616,123145592,123146259,123150364,123155041,123161455,123162104	Gene ID= ENSG00000065485.19 TPM= 4.83 Transcript Type= protein_coding
chr3	123491554	123585080	123491554	123585080	-	transcript4137.chr3.nnic@HACD2	transcript4137.chr3.nnic	protein_coding	123584873,123582212,123567762,123528386,123519277,123502560,123500515,123491554	123585080,123582329,123567780,123528474,123519329,123502681,123500693,123494970	Gene ID= ENSG00000206527.9 TPM= 5.79 Transcript Type= NA
chr3	123491554	123585185	123491554	123585185	-	ENST00000383657.9@HACD2	ENST00000383657.9	protein_coding	123584873,123582212,123567762,123528386,123502560,123500515,123491554	123585185,123582329,123567780,123528474,123502681,123500693,123494970	Gene ID= ENSG00000206527.9 TPM= 5.79 Transcript Type= protein_coding
chr3	123511456	123585080	123511456	123585080	-	transcript4140.chr3.nnic@HACD2	transcript4140.chr3.nnic	protein_coding	123584873,123582212,123567762,123528386,123519277,123511456	123585080,123582329,123567780,123528474,123519329,123513723	Gene ID= ENSG00000206527.9 TPM= 2.9 Transcript Type= NA
chr3	123614029	123701160	123614029	123701160	-	transcript4143.chr3.nic@MYLK	transcript4143.chr3.nic	protein_coding	123700020,123692735,123682224,123667137,123666219,123664105,123657126,123649162,123648971,123647224,123640287,123638071,123629474,123626818,123620207,123618639,123614029	123701160,123692851,123682310,123667187,123666346,123664258,123657428,123649194,123649064,123647427,123640504,123638194,123629626,123626941,123620336,123618770,123614349	Gene ID= ENSG00000065534.18 TPM= 6.76 Transcript Type= NA
chr3	123913725	123961272	123913725	123961272	-	ENST00000409657.5@CCDC14	ENST00000409657.5	protein_coding	123961144,123956355,123956046,123955843,123948896,123948691,123946803,123944849,123933673,123931308,123931102,123913725	123961272,123956427,123956115,123955965,123949132,123948785,123947319,123944990,123933755,123931526,123931234,123915718	Gene ID= ENSG00000175455.14 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr3	124032488	124032596	124032488	124032596	+	transcript4152.chr3.nnic@NA	transcript4152.chr3.nnic	NA	124032488	124032596	Gene ID= novel_gene_chr3_4153 TPM= 1.93 Transcript Type= NA
chr3	124584657	124679698	124584657	124679698	+	transcript4157.chr3.nic@KALRN	transcript4157.chr3.nic	protein_coding	124584657,124632420,124633849,124637208,124650808,124655601,124657448,124657734,124658431,124659365,124660923,124661851,124666449,124667012,124671660,124674364,124678190,124679458	124584906,124632703,124633953,124637303,124650938,124655667,124657551,124657803,124658517,124659457,124660973,124661928,124666634,124667183,124671898,124674614,124678313,124679698	Gene ID= ENSG00000160145.15 TPM= 1.93 Transcript Type= NA
chr3	124584657	124675427	124584657	124675427	+	transcript4158.chr3.nic@KALRN	transcript4158.chr3.nic	protein_coding	124584657,124632420,124633849,124637208,124650808,124655601,124657448,124657734,124658431,124659365,124660923,124661851,124666449,124667012,124671660,124674364	124584906,124632703,124633953,124637303,124650938,124655667,124657551,124657803,124658517,124659457,124660973,124661928,124666634,124667183,124671898,124675427	Gene ID= ENSG00000160145.15 TPM= 8.69 Transcript Type= NA
chr3	124730366	124749273	124730366	124749273	+	ENST00000232607.6@UMPS	ENST00000232607.6	protein_coding	124730366,124735093,124737568,124740024,124742152,124743915	124730627,124735246,124738239,124740199,124742266,124749273	Gene ID= ENSG00000114491.13 TPM= 8.69 Transcript Type= protein_coding
chr3	124762948	124887500	124762948	124887500	-	transcript4171.chr3.nic@ITGB5	transcript4171.chr3.nic	protein_coding	124886931,124873446,124859242,124848309,124841383,124821313,124819739,124817621,124796388,124773690,124769013,124766226,124764391,124762948	124887500,124873531,124859446,124848558,124841551,124821474,124819834,124817710,124796817,124773912,124769113,124766345,124764557,124763718	Gene ID= ENSG00000082781.11 TPM= 3.54 Transcript Type= NA
chr3	125012804	125055898	125012804	125055898	-	transcript4180.chr3.nic@HEG1	transcript4180.chr3.nic	protein_coding	125055575,125029195,125027205,125020792,125019262,125014713,125012804	125055898,125029488,125027507,125021130,125019597,125015012,125013990	Gene ID= ENSG00000173706.12 TPM= 1.93 Transcript Type= NA
chr3	125225561	125375354	125225561	125375354	-	ENST00000360647.8@ZNF148	ENST00000360647.8	protein_coding	125375102,125331158,125323309,125313308,125288103,125279124,125277726,125234211,125225561	125375354,125331238,125323444,125313656,125288228,125279247,125277809,125234329,125233939	Gene ID= ENSG00000163848.19 TPM= 11.58 Transcript Type= protein_coding
chr3	125232079	125375251	125232079	125375251	-	ENST00000492394.5@ZNF148	ENST00000492394.5	protein_coding	125375102,125323309,125313308,125288103,125279124,125277726,125234211,125232079	125375251,125323444,125313656,125288228,125279247,125277809,125234329,125233939	Gene ID= ENSG00000163848.19 TPM= 1.93 Transcript Type= protein_coding
chr3	125446644	125520232	125446644	125520232	-	transcript4196.chr3.nic@SNX4	transcript4196.chr3.nic	protein_coding	125520032,125504623,125498059,125497834,125497341,125480247,125476695,125469454,125460771,125457266,125453810,125451305,125446644	125520232,125504744,125498194,125497983,125497388,125480319,125476756,125469519,125460860,125457365,125453955,125451419,125447826	Gene ID= ENSG00000114520.10 TPM= 3.86 Transcript Type= NA
chr3	125446644	125520197	125446644	125520197	-	ENST00000251775.8@SNX4	ENST00000251775.8	protein_coding	125520032,125504623,125498059,125497834,125497341,125489408,125480247,125476695,125469454,125460771,125457266,125453810,125451305,125446644	125520197,125504744,125498194,125497983,125497388,125489463,125480319,125476756,125469519,125460860,125457365,125453955,125451419,125447826	Gene ID= ENSG00000114520.10 TPM= 79.64 Transcript Type= protein_coding
chr3	125594868	125595515	125594868	125595515	-	transcript4215.chr3.nnic@NA	transcript4215.chr3.nnic	NA	125594868	125595515	Gene ID= novel_gene_chr3_4216 TPM= 1.93 Transcript Type= NA
chr3	125916630	125930024	125916630	125930024	+	ENST00000485843.1@FAM86JP	ENST00000485843.1	transcribed_unprocessed_pseudogene	125916630,125918864,125920825,125924966,125928495	125916817,125918926,125920905,125925115,125930024	Gene ID= ENSG00000171084.15 TPM= 1.93 Transcript Type= processed_transcript
chr3	125958190	125960481	125958190	125960481	+	transcript4222.chr3.nnic@NA	transcript4222.chr3.nnic	NA	125958190	125960481	Gene ID= novel_gene_chr3_4223 TPM= 1.93 Transcript Type= NA
chr3	126006363	126084318	126006363	126084318	-	transcript4234.chr3.nic@SLC41A3	transcript4234.chr3.nic	protein_coding	126084093,126067947,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006363	126084318,126068246,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225	Gene ID= ENSG00000114544.16 TPM= 8.21 Transcript Type= NA
chr3	126006355	126084109	126006355	126084109	-	ENST00000360370.8@SLC41A3	ENST00000360370.8	protein_coding	126084093,126067947,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006355	126084109,126068246,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225	Gene ID= ENSG00000114544.16 TPM= 57.44 Transcript Type= protein_coding
chr3	126006373	126084304	126006373	126084304	-	ENST00000315891.10@SLC41A3	ENST00000315891.10	protein_coding	126084093,126067947,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126007114,126006373	126084304,126068246,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225,126006564	Gene ID= ENSG00000114544.16 TPM= 7.72 Transcript Type= protein_coding
chr3	126103571	126180583	126103571	126180583	-	transcript4244.chr3.nic@ALDH1L1	transcript4244.chr3.nic	protein_coding	126180312,126160853,126158405,126157343,126155402,126154554,126153444,126150406,126146835,126137813,126136764,126135535,126131384,126130223,126125616,126124364,126118005,126114557,126112782,126109944,126107141,126105726,126103571	126180583,126161002,126158639,126157508,126155503,126154643,126153581,126150531,126146926,126137960,126136883,126135662,126131534,126130293,126125721,126124451,126118098,126114656,126112880,126110109,126107246,126105925,126103846	Gene ID= ENSG00000144908.13 TPM= 13.97 Transcript Type= NA
chr3	126103573	126180802	126103573	126180802	-	ENST00000393434.6@ALDH1L1	ENST00000393434.6	protein_coding	126180476,126160853,126158405,126157343,126155402,126154554,126153444,126150406,126146835,126137813,126136764,126135535,126131384,126130223,126125616,126124364,126118005,126114557,126112782,126109944,126107141,126105726,126103573	126180802,126161002,126158639,126157508,126155503,126154643,126153581,126150531,126146926,126137960,126136883,126135662,126131534,126130293,126125721,126124451,126118098,126114656,126112880,126110109,126107246,126105925,126103846	Gene ID= ENSG00000144908.13 TPM= 82.48 Transcript Type= protein_coding
chr3	126103571	126180923	126103571	126180923	-	transcript4246.chr3.nic@ALDH1L1	transcript4246.chr3.nic	protein_coding	126180800,126160853,126158405,126157343,126155402,126154554,126153444,126150406,126146835,126137813,126136764,126135535,126131384,126130223,126125616,126124364,126118005,126114557,126112782,126109944,126107141,126105726,126103571	126180923,126161002,126158639,126157508,126155503,126154643,126153581,126150531,126146926,126137960,126136883,126135662,126131534,126130293,126125721,126124451,126118098,126114656,126112880,126110109,126107246,126105925,126103846	Gene ID= ENSG00000144908.13 TPM= 14.93 Transcript Type= NA
chr3	126103571	126197956	126103571	126197956	-	transcript4247.chr3.nic@ALDH1L1	transcript4247.chr3.nic	protein_coding	126197735,126160853,126158405,126157343,126155402,126154554,126153444,126150406,126146835,126137813,126136764,126135535,126131384,126130223,126125616,126124364,126118005,126114557,126112782,126109944,126107141,126105726,126103571	126197956,126161002,126158639,126157508,126155503,126154643,126153581,126150531,126146926,126137960,126136883,126135662,126131534,126130293,126125721,126124451,126118098,126114656,126112880,126110109,126107246,126105925,126103846	Gene ID= ENSG00000144908.13 TPM= 13.97 Transcript Type= NA
chr3	126287705	126289581	126287705	126289581	+	transcript4262.chr3.nnic@NA	transcript4262.chr3.nnic	NA	126287705	126289581	Gene ID= novel_gene_chr3_4263 TPM= 1.93 Transcript Type= NA
chr3	126342635	126357442	126342635	126357442	-	ENST00000296233.3@KLF15	ENST00000296233.3	protein_coding	126357237,126351841,126342635	126357442,126352947,126343895	Gene ID= ENSG00000163884.3 TPM= 22.2 Transcript Type= protein_coding
chr3	126437601	126475981	126437601	126475981	-	transcript4266.chr3.nnic@ZXDC	transcript4266.chr3.nnic	protein_coding	126474959,126472153,126471973,126470895,126466155,126461535,126460376,126459653,126441765,126439632,126437601	126475981,126472305,126472051,126471025,126466325,126462220,126460438,126459737,126441946,126439727,126438461	Gene ID= ENSG00000070476.14 TPM= 8.67 Transcript Type= NA
chr3	126437601	126475981	126437601	126475981	-	transcript4267.chr3.nnic@ZXDC	transcript4267.chr3.nnic	protein_coding	126474959,126472153,126471973,126470895,126466155,126461270,126459653,126441765,126439632,126437601	126475981,126472305,126472051,126471025,126466325,126462220,126459737,126441946,126439727,126438461	Gene ID= ENSG00000070476.14 TPM= 6.74 Transcript Type= NA
chr3	126437601	126475981	126437601	126475981	-	transcript4272.chr3.nnic@ZXDC	transcript4272.chr3.nnic	protein_coding	126474959,126472153,126471973,126470895,126466155,126461535,126439632,126437601	126475981,126472305,126472051,126471025,126466325,126462220,126439727,126438461	Gene ID= ENSG00000070476.14 TPM= 8.35 Transcript Type= NA
chr3	126463089	126475981	126463089	126475981	-	transcript4279.chr3.nic@ZXDC	transcript4279.chr3.nic	protein_coding	126474959,126472153,126471973,126470895,126463089	126475981,126472305,126472051,126471025,126466325	Gene ID= ENSG00000070476.14 TPM= 3.14 Transcript Type= NA
chr3	126437601	126475919	126437601	126475919	-	ENST00000389709.7@ZXDC	ENST00000389709.7	protein_coding	126474959,126472153,126471973,126470895,126466155,126461535,126459653,126441765,126439632,126437601	126475919,126472305,126472051,126471025,126466325,126462220,126459737,126441946,126439727,126438461	Gene ID= ENSG00000070476.14 TPM= 21.94 Transcript Type= protein_coding
chr3	126461083	126475865	126461083	126475865	-	ENST00000336332.5@ZXDC	ENST00000336332.5	protein_coding	126474959,126472153,126471973,126470895,126466155,126461083	126475865,126472305,126472051,126471025,126466325,126462220	Gene ID= ENSG00000070476.14 TPM= 1.35 Transcript Type= protein_coding
chr3	126444633	126446284	126444633	126446284	-	transcript4285.chr3.nnic@NA	transcript4285.chr3.nnic	NA	126444633	126446284	Gene ID= novel_gene_chr3_4286 TPM= 1.93 Transcript Type= NA
chr3	126451114	126453355	126451114	126453355	-	transcript4287.chr3.nnic@NA	transcript4287.chr3.nnic	NA	126451114	126453355	Gene ID= novel_gene_chr3_4288 TPM= 2.9 Transcript Type= NA
chr3	126458239	126460491	126458239	126460491	-	transcript4283.chr3.nnic@NA	transcript4283.chr3.nnic	NA	126458239	126460491	Gene ID= novel_gene_chr3_4284 TPM= 2.9 Transcript Type= NA
chr3	126611023	126655110	126611023	126655110	-	transcript4296.chr3.nnic@TXNRD3	transcript4296.chr3.nnic	protein_coding	126654748,126647236,126646111,126644297,126643981,126642032,126633909,126631764,126630712,126629379,126622464,126621742,126617498,126615355,126611023	126655110,126647296,126646220,126644401,126644053,126642151,126634051,126631879,126630937,126629471,126622540,126621898,126617586,126615462,126611132	Gene ID= ENSG00000197763.14 TPM= 1.93 Transcript Type= NA
chr3	126704220	126960406	126704220	126960406	+	ENST00000290913.7@CHCHD6	ENST00000290913.7	protein_coding	126704220,126727078,126730561,126733078,126852647,126914680,126957416,126960196	126704399,126727186,126730630,126733222,126852730,126914750,126957551,126960406	Gene ID= ENSG00000159685.10 TPM= 2.9 Transcript Type= protein_coding
chr3	127573069	127590730	127573069	127590730	-	transcript4301.chr3.nnic@TPRA1	transcript4301.chr3.nnic	protein_coding	127590410,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573465,127573069	127590730,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788,127573321	Gene ID= ENSG00000163870.14 TPM= 4.1 Transcript Type= NA
chr3	127573069	127590732	127573069	127590732	-	transcript4302.chr3.nnic@TPRA1	transcript4302.chr3.nnic	protein_coding	127590410,127587984,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573069	127590732,127588160,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 9.89 Transcript Type= NA
chr3	127573069	127591111	127573069	127591111	-	transcript4306.chr3.nic@TPRA1	transcript4306.chr3.nic	protein_coding	127590883,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573069	127591111,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 7.96 Transcript Type= NA
chr3	127573087	127590769	127573087	127590769	-	ENST00000355552.7@TPRA1	ENST00000355552.7	protein_coding	127590410,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573087	127590769,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 79.08 Transcript Type= protein_coding
chr3	127598223	127622436	127598223	127622436	+	ENST00000265056.11@MCM2	ENST00000265056.11	protein_coding	127598223,127599318,127604608,127604896,127606118,127606610,127608382,127608832,127615862,127616868,127617279,127617969,127619027,127620698,127621073,127621663	127598472,127599547,127604783,127605156,127606337,127606817,127608516,127609023,127615955,127617118,127617405,127618081,127619278,127620880,127621228,127622436	Gene ID= ENSG00000073111.13 TPM= 18.34 Transcript Type= protein_coding
chr3	127629181	127672809	127629181	127672809	+	ENST00000342480.6@PODXL2	ENST00000342480.6	protein_coding	127629181,127639245,127660378,127662237,127668441,127669141,127671434,127672268	127629289,127639523,127661159,127662311,127668597,127669202,127671613,127672809	Gene ID= ENSG00000114631.10 TPM= 7.72 Transcript Type= protein_coding
chr3	127673005	127680913	127673005	127680913	+	transcript4331.chr3.nic@ABTB1	transcript4331.chr3.nic	protein_coding	127673005,127674391,127674545,127675970,127676272,127676536,127676967,127677465,127677676,127679985,127680269	127673081,127674418,127674600,127676114,127676431,127676581,127677286,127677563,127677843,127680185,127680913	Gene ID= ENSG00000114626.17 TPM= 2.65 Transcript Type= NA
chr3	127672940	127680917	127672940	127680917	+	ENST00000232744.12@ABTB1	ENST00000232744.12	protein_coding	127672940,127674391,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269	127673081,127674453,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680917	Gene ID= ENSG00000114626.17 TPM= 24.21 Transcript Type= protein_coding
chr3	127672958	127680920	127672958	127680920	+	ENST00000453791.6@ABTB1	ENST00000453791.6	protein_coding	127672958,127674345,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269	127673081,127674418,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680920	Gene ID= ENSG00000114626.17 TPM= 9.73 Transcript Type= protein_coding
chr3	127672958	127680920	127672958	127680920	+	ENST00000475042.5@ABTB1	ENST00000475042.5	protein_coding	127672958,127674391,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269	127673081,127674418,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680920	Gene ID= ENSG00000114626.17 TPM= 5.87 Transcript Type= nonsense_mediated_decay
chr3	127689062	127822882	127689062	127822882	-	ENST00000453507.6@MGLL	ENST00000453507.6	protein_coding	127822309,127821694,127781789,127722430,127721053,127694975,127689062	127822882,127821838,127781895,127722566,127721163,127695190,127692323	Gene ID= ENSG00000074416.13 TPM= 44.4 Transcript Type= protein_coding
chr3	127692111	127823438	127692111	127823438	-	transcript4350.chr3.nic@MGLL	transcript4350.chr3.nic	protein_coding	127823084,127821694,127781789,127722430,127721053,127694975,127692111	127823438,127821838,127781895,127722566,127721163,127695190,127692323	Gene ID= ENSG00000074416.13 TPM= 6.76 Transcript Type= NA
chr3	127689062	127823250	127689062	127823250	-	ENST00000398104.5@MGLL	ENST00000398104.5	protein_coding	127823084,127821694,127781789,127722430,127721053,127710576,127694975,127689062	127823250,127821838,127781895,127722566,127721163,127710665,127695190,127692323	Gene ID= ENSG00000074416.13 TPM= 47.3 Transcript Type= protein_coding
chr3	127915477	127987657	127915477	127987657	+	transcript4356.chr3.nnic@KBTBD12	transcript4356.chr3.nnic	protein_coding	127915477,127922950,127927764,127930133,127963189,127984097,127987482	127915586,127924131,127928034,127930283,127963386,127984279,127987657	Gene ID= ENSG00000187715.13 TPM= 3.54 Transcript Type= NA
chr3	127915469	127987666	127915469	127987666	+	transcript4358.chr3.nnic@KBTBD12	transcript4358.chr3.nnic	protein_coding	127915469,127922950,127927764,127930133,127963189,127984097	127915909,127924131,127928034,127930283,127963386,127987666	Gene ID= ENSG00000187715.13 TPM= 12.79 Transcript Type= NA
chr3	127915232	127987666	127915232	127987666	+	ENST00000405109.5@KBTBD12	ENST00000405109.5	protein_coding	127915232,127922950,127927764,127930133,127963189,127984097	127915586,127924131,127928034,127930283,127963386,127987666	Gene ID= ENSG00000187715.13 TPM= 20.19 Transcript Type= protein_coding
chr3	127915477	127987666	127915477	127987666	+	transcript4362.chr3.nic@KBTBD12	transcript4362.chr3.nic	protein_coding	127915477,127927764,127930133,127963189,127984097	127915586,127927834,127930283,127963386,127987666	Gene ID= ENSG00000187715.13 TPM= 8.45 Transcript Type= NA
chr3	127915475	127987666	127915475	127987666	+	ENST00000407609.7@KBTBD12	ENST00000407609.7	protein_coding	127915475,127927764,127930133,127963189,127984097	127915586,127928034,127930283,127963386,127987666	Gene ID= ENSG00000187715.13 TPM= 12.31 Transcript Type= protein_coding
chr3	127915477	127930467	127915477	127930467	+	transcript4365.chr3.nic@KBTBD12	transcript4365.chr3.nic	protein_coding	127915477,127922950,127927764,127930133	127915586,127924131,127928034,127930467	Gene ID= ENSG00000187715.13 TPM= 3.54 Transcript Type= NA
chr3	128052369	128071682	128052369	128071682	+	ENST00000243253.7@SEC61A1	ENST00000243253.7	protein_coding	128052369,128052835,128055516,128055673,128056709,128060102,128060508,128064877,128066954,128067421,128067983,128069476	128052559,128052902,128055581,128055751,128056840,128060211,128060661,128065037,128067151,128067612,128068059,128071682	Gene ID= ENSG00000058262.9 TPM= 194.97 Transcript Type= protein_coding
chr3	128065900	128071681	128065900	128071681	+	transcript4384.chr3.nnic@NA	transcript4384.chr3.nnic	NA	128065900	128071681	Gene ID= novel_gene_chr3_4385 TPM= 1.93 Transcript Type= NA
chr3	128080960	128123824	128080960	128123824	-	ENST00000322623.9@RUVBL1	ENST00000322623.9	protein_coding	128123584,128119328,128112888,128104773,128101559,128100595,128098882,128097300,128087706,128082483,128080960	128123824,128119414,128113020,128104924,128101648,128100744,128098945,128097498,128087808,128082574,128081409	Gene ID= ENSG00000175792.11 TPM= 15.44 Transcript Type= protein_coding
chr3	128153437	128408646	128153437	128408646	+	transcript4393.chr3.nnic@EEFSEC	transcript4393.chr3.nnic	protein_coding	128153437,128246836,128262128,128264617,128341233,128358262,128408069	128153823,128247043,128262224,128264781,128341889,128358373,128408646	Gene ID= ENSG00000132394.10 TPM= 2.25 Transcript Type= NA
chr3	128153437	128408646	128153437	128408646	+	transcript4394.chr3.nic@EEFSEC	transcript4394.chr3.nic	protein_coding	128153437,128246836,128262128,128341233,128358217,128408069	128153823,128247043,128262224,128341889,128358373,128408646	Gene ID= ENSG00000132394.10 TPM= 3.21 Transcript Type= NA
chr3	128153454	128408646	128153454	128408646	+	ENST00000254730.10@EEFSEC	ENST00000254730.10	protein_coding	128153454,128246836,128262128,128264617,128341233,128358217,128408069	128153823,128247043,128262224,128264781,128341889,128358373,128408646	Gene ID= ENSG00000132394.10 TPM= 55.34 Transcript Type= protein_coding
chr3	128479427	128487931	128479427	128487931	-	transcript4398.chr3.nic@GATA2	transcript4398.chr3.nic	protein_coding	128487711,128486803,128485727,128483860,128481819,128479427	128487931,128487076,128486368,128484005,128481944,128481318	Gene ID= ENSG00000179348.11 TPM= 5.63 Transcript Type= NA
chr3	128479427	128493185	128479427	128493185	-	ENST00000341105.6@GATA2	ENST00000341105.6	protein_coding	128492899,128486803,128485727,128483860,128481819,128479427	128493185,128487076,128486368,128484005,128481944,128481318	Gene ID= ENSG00000179348.11 TPM= 10.94 Transcript Type= protein_coding
chr3	128619970	128650849	128619970	128650849	-	ENST00000296255.7@RPN1	ENST00000296255.7	protein_coding	128650540,128644919,128637799,128631948,128629951,128626733,128625874,128625534,128622164,128619970	128650849,128644983,128638105,128632157,128630143,128626832,128626012,128625653,128622409,128620593	Gene ID= ENSG00000163902.11 TPM= 274.15 Transcript Type= protein_coding
chr3	128726122	128814796	128726122	128814796	+	ENST00000265062.7@RAB7A	ENST00000265062.7	protein_coding	128726122,128795360,128797943,128806372,128807543,128813327	128726359,128795420,128798069,128806590,128807671,128814796	Gene ID= ENSG00000075785.12 TPM= 212.37 Transcript Type= protein_coding
chr3	128747863	128752307	128747863	128752307	+	transcript4424.chr3.nnic@NA	transcript4424.chr3.nnic	NA	128747863	128752307	Gene ID= novel_gene_chr3_4425 TPM= 1.93 Transcript Type= NA
chr3	128879611	128913114	128879611	128913114	+	ENST00000308982.11@ACAD9	ENST00000308982.11	protein_coding	128879611,128884653,128893555,128895310,128896436,128897632,128899287,128901276,128902553,128904062,128904386,128906121,128908185,128908973,128909344,128910021,128910741,128912507	128879841,128884746,128893656,128895416,128896536,128897710,128899461,128901349,128902628,128904132,128904505,128906249,128908264,128909099,128909421,128910149,128910813,128913114	Gene ID= ENSG00000177646.18 TPM= 34.75 Transcript Type= protein_coding
chr3	128880550	128882276	128880550	128882276	-	transcript4440.chr3.nnic@NA	transcript4440.chr3.nnic	NA	128880550	128882276	Gene ID= novel_gene_chr3_4441 TPM= 4.83 Transcript Type= NA
chr3	128883075	128885065	128883075	128885065	-	transcript4442.chr3.nnic@NA	transcript4442.chr3.nnic	NA	128883075	128885065	Gene ID= novel_gene_chr3_4443 TPM= 3.86 Transcript Type= NA
chr3	129001303	129035181	129001303	129035181	+	transcript4445.chr3.nnic@EFCC1	transcript4445.chr3.nnic	protein_coding	129001303,129003794,129030703,129032819,129034164	129002324,129004077,129030860,129032966,129035181	Gene ID= ENSG00000114654.7 TPM= 1.93 Transcript Type= NA
chr3	129168118	129168627	129168118	129168627	+	transcript4495.chr3.nnic@NA	transcript4495.chr3.nnic	NA	129168118	129168627	Gene ID= novel_gene_chr3_4496 TPM= 27.99 Transcript Type= NA
chr3	129169484	129183922	129169484	129183922	-	ENST00000422453.6@CNBP	ENST00000422453.6	protein_coding	129183776,129171634,129171446,129171079,129169484	129183922,129171771,129171538,129171277,129170570	Gene ID= ENSG00000169714.16 TPM= 318.63 Transcript Type= protein_coding
chr3	129169487	129183899	129169487	129183899	-	ENST00000446936.6@CNBP	ENST00000446936.6	protein_coding	129183776,129171655,129171446,129171079,129169487	129183899,129171771,129171538,129171283,129170570	Gene ID= ENSG00000169714.16 TPM= 30.17 Transcript Type= protein_coding
chr3	129169569	129183922	129169569	129183922	-	ENST00000504813.5@CNBP	ENST00000504813.5	protein_coding	129183776,129171634,129171446,129171079,129169569	129183922,129171771,129171508,129171277,129170570	Gene ID= ENSG00000169714.16 TPM= 533.09 Transcript Type= protein_coding
chr3	129169569	129183910	129169569	129183910	-	ENST00000500450.6@CNBP	ENST00000500450.6	protein_coding	129183776,129171655,129171446,129171079,129169569	129183910,129171771,129171508,129171277,129170570	Gene ID= ENSG00000169714.16 TPM= 2.17 Transcript Type= protein_coding
chr3	129249606	129277773	129249606	129277773	+	ENST00000314797.10@COPG1	ENST00000314797.10	protein_coding	129249606,129250682,129252281,129252623,129252876,129254668,129254985,129256068,129257470,129257727,129260333,129260619,129263904,129265549,129267024,129267937,129268495,129268932,129271767,129272244,129272807,129274838,129275194,129277294	129249746,129250734,129252361,129252694,129252955,129254743,129255077,129256154,129257627,129257860,129260400,129260807,129263999,129265792,129267099,129268040,129268620,129269000,129271909,129272415,129272904,129274976,129275292,129277773	Gene ID= ENSG00000181789.14 TPM= 204 Transcript Type= protein_coding
chr3	129249632	129277771	129249632	129277771	+	ENST00000515725.5@COPG1	ENST00000515725.5	protein_coding	129249632,129250682,129252281,129252623,129254668,129254985,129256068,129257470,129257727,129260333,129260619,129263904,129265549,129267024,129267937,129268495,129268932,129271767,129272244,129272807,129274838,129275194,129277294	129249746,129250734,129252361,129252955,129254743,129255077,129256154,129257627,129257860,129260400,129260807,129263999,129265792,129267099,129268040,129268620,129269000,129271909,129272415,129272904,129274976,129275292,129277771	Gene ID= ENSG00000181789.14 TPM= 6.11 Transcript Type= retained_intron
chr3	129278840	129306186	129278840	129306186	+	ENST00000383463.8@HMCES	ENST00000383463.8	protein_coding	129278840,129279710,129288854,129290679,129298354,129301950,129304589	129278905,129279915,129288997,129290804,129298535,129302142,129306186	Gene ID= ENSG00000183624.13 TPM= 24.13 Transcript Type= protein_coding
chr3	129278846	129305293	129278846	129305293	+	ENST00000417226.6@HMCES	ENST00000417226.6	protein_coding	129278846,129279710,129288854,129298354,129301950,129304589	129278905,129279915,129288997,129298535,129302142,129305293	Gene ID= ENSG00000183624.13 TPM= 3.38 Transcript Type= protein_coding
chr3	129278974	129305262	129278974	129305262	+	ENST00000389735.7@HMCES	ENST00000389735.7	protein_coding	129278974,129279710,129288854,129290679,129298354,129301950,129304589	129279211,129279915,129288997,129290804,129298535,129302142,129305262	Gene ID= ENSG00000183624.13 TPM= 6.27 Transcript Type= protein_coding
chr3	129314771	129316277	129314771	129316277	-	ENST00000333762.5@H1FX	ENST00000333762.5	protein_coding	129314771	129316277	Gene ID= ENSG00000184897.5 TPM= 139 Transcript Type= protein_coding
chr3	129396302	129399433	129396302	129399433	-	transcript4534.chr3.nic@RPL32P3	transcript4534.chr3.nic	transcribed_unprocessed_pseudogene	129399008,129397040,129396302	129399433,129397140,129396420	Gene ID= ENSG00000251474.6 TPM= 1.93 Transcript Type= NA
chr3	129431266	129440019	129431266	129440019	-	transcript4536.chr3.nnic@MBD4	transcript4536.chr3.nnic	protein_coding	129439730,129438809,129437720,129436443,129434062,129433850,129433098,129432503,129431266	129440019,129438906,129437950,129437308,129434136,129433984,129433247,129432606,129431578	Gene ID= ENSG00000129071.9 TPM= 1.93 Transcript Type= NA
chr3	129436705	129440050	129436705	129440050	-	transcript4546.chr3.nic@MBD4	transcript4546.chr3.nic	protein_coding	129439730,129437720,129436705	129440050,129437950,129437308	Gene ID= ENSG00000129071.9 TPM= 8.69 Transcript Type= NA
chr3	129430950	129440009	129430950	129440009	-	ENST00000249910.5@MBD4	ENST00000249910.5	protein_coding	129439730,129437720,129436443,129434062,129433850,129433098,129432503,129430950	129440009,129437950,129437308,129434136,129433984,129433247,129432606,129431578	Gene ID= ENSG00000129071.9 TPM= 1.93 Transcript Type= protein_coding
chr3	129440125	129520351	129440125	129520351	+	ENST00000347300.6@IFT122	ENST00000347300.6	protein_coding	129440125,129449871,129451914,129458599,129461228,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129492141,129495446,129499902,129502711,129504319,129506409,129507668,129512312,129514389,129515488,129517469,129519107,129519568,129520176	129440371,129449937,129451998,129458677,129461304,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129492194,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520351	Gene ID= ENSG00000163913.11 TPM= 6.76 Transcript Type= protein_coding
chr3	129440128	129520347	129440128	129520347	+	transcript4553.chr3.nic@IFT122	transcript4553.chr3.nic	protein_coding	129440128,129449871,129451914,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129495446,129499902,129502711,129504319,129506409,129507668,129512312,129514389,129515488,129517469,129519107,129519568,129520176	129440371,129449937,129451998,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520347	Gene ID= ENSG00000163913.11 TPM= 1.93 Transcript Type= NA
chr3	129555175	129606818	129555175	129606818	-	ENST00000324093.8@PLXND1	ENST00000324093.8	protein_coding	129605329,129589351,129586588,129586172,129585952,129584385,129584125,129583567,129578329,129575766,129575469,129574336,129573594,129572842,129572609,129571677,129571509,129571040,129570786,129569843,129567698,129567492,129566527,129565887,129565340,129563094,129562787,129561800,129561646,129560689,129560330,129559620,129558428,129557083,129556617,129555175	129606818,129589527,129586719,129586272,129586081,129584562,129584233,129583669,129578433,129575855,129575562,129574490,129573745,129572941,129572748,129571844,129571599,129571303,129570935,129569957,129567805,129567604,129566631,129566017,129565538,129563240,129562943,129561903,129561709,129560723,129560434,129559783,129558575,129557223,129556691,129556428	Gene ID= ENSG00000004399.12 TPM= 21.24 Transcript Type= protein_coding
chr3	129650557	129893726	129650557	129893726	-	transcript4559.chr3.nnic@TMCC1	transcript4559.chr3.nnic	protein_coding	129893494,129880309,129832774,129831409,129827803,129670330,129654968,129650557	129893726,129880559,129832826,129831448,129828508,129671264,129655103,129651795	Gene ID= ENSG00000172765.16 TPM= 4.18 Transcript Type= NA
chr3	129650557	129893726	129650557	129893726	-	transcript4563.chr3.nic@TMCC1	transcript4563.chr3.nic	protein_coding	129893494,129880309,129832774,129827803,129670330,129654968,129650557	129893726,129880559,129832826,129828077,129671264,129655103,129651795	Gene ID= ENSG00000172765.16 TPM= 4.18 Transcript Type= NA
chr3	129648691	129724111	129648691	129724111	-	transcript4570.chr3.nnic@TMCC1	transcript4570.chr3.nnic	protein_coding	129723964,129670330,129654968,129648691	129724111,129671264,129655103,129651795	Gene ID= ENSG00000172765.16 TPM= 9.65 Transcript Type= NA
chr3	129847057	129893599	129847057	129893599	-	transcript4574.chr3.nnic@TMCC1	transcript4574.chr3.nnic	protein_coding	129893494,129884880,129880309,129847057	129893599,129884971,129880559,129848412	Gene ID= ENSG00000172765.16 TPM= 2.41 Transcript Type= NA
chr3	129847057	129893726	129847057	129893726	-	transcript4575.chr3.nnic@TMCC1	transcript4575.chr3.nnic	protein_coding	129893494,129880309,129847057	129893726,129880559,129848412	Gene ID= ENSG00000172765.16 TPM= 5.31 Transcript Type= NA
chr3	130678935	130746829	130678935	130746829	-	ENST00000356763.7@PIK3R4	ENST00000356763.7	protein_coding	130746318,130744486,130735869,130733548,130730308,130728463,130723414,130718389,130716396,130708291,130706948,130705561,130703723,130690490,130686211,130684250,130681491,130680977,130680613,130678935	130746829,130745264,130736002,130734130,130730442,130728684,130723587,130718534,130716599,130708492,130707135,130705771,130703888,130690654,130686422,130684381,130681591,130681065,130680721,130679485	Gene ID= ENSG00000196455.7 TPM= 5.79 Transcript Type= protein_coding
chr3	130893973	131016684	130893973	131016684	+	transcript4585.chr3.nic@ATP2C1	transcript4585.chr3.nic	protein_coding	130893973,130894590,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152	130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001344,131016684	Gene ID= ENSG00000017260.19 TPM= 3.21 Transcript Type= NA
chr3	130893978	131016684	130893978	131016684	+	transcript4589.chr3.nic@ATP2C1	transcript4589.chr3.nic	protein_coding	130893978,130894708,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152	130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001344,131016684	Gene ID= ENSG00000017260.19 TPM= 3.21 Transcript Type= NA
chr3	130893968	131003107	130893968	131003107	+	ENST00000510168.5@ATP2C1	ENST00000510168.5	protein_coding	130893968,130894590,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220	130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131003107	Gene ID= ENSG00000017260.19 TPM= 9.97 Transcript Type= protein_coding
chr3	131013875	131026802	131013875	131026802	-	ENST00000264992.7@ASTE1	ENST00000264992.7	protein_coding	131026507,131025474,131024005,131018506,131016144,131013875	131026802,131025594,131025331,131018716,131016339,131014387	Gene ID= ENSG00000034533.11 TPM= 1.93 Transcript Type= protein_coding
chr3	131462212	131502994	131462212	131502994	-	transcript4633.chr3.nic@MRPL3	transcript4633.chr3.nic	protein_coding	131502730,131501531,131500430,131489981,131487680,131471171,131469696,131468091,131462212	131502994,131501715,131500521,131490080,131487740,131471279,131469773,131468168,131462875	Gene ID= ENSG00000114686.8 TPM= 3.86 Transcript Type= NA
chr3	131482987	131502933	131482987	131502933	-	transcript4636.chr3.nic@MRPL3	transcript4636.chr3.nic	protein_coding	131502730,131501531,131500430,131498179,131489981,131482987	131502933,131501715,131500521,131498277,131490080,131487740	Gene ID= ENSG00000114686.8 TPM= 3.86 Transcript Type= NA
chr3	131462212	131502969	131462212	131502969	-	ENST00000264995.7@MRPL3	ENST00000264995.7	protein_coding	131502730,131501531,131500430,131498179,131489981,131487680,131471171,131469696,131468091,131462212	131502969,131501715,131500521,131498277,131490080,131487740,131471279,131469773,131468168,131462875	Gene ID= ENSG00000114686.8 TPM= 59.85 Transcript Type= protein_coding
chr3	132417526	132539032	132417526	132539032	+	ENST00000260818.10@DNAJC13	ENST00000260818.10	protein_coding	132417526,132434538,132446475,132447321,132447898,132450647,132453298,132453599,132454066,132456235,132456501,132456663,132457269,132460250,132461050,132462467,132463696,132465995,132466299,132467170,132473145,132474932,132477789,132477981,132479227,132480369,132482226,132483375,132484588,132488298,132488976,132490897,132492414,132494144,132495088,132496528,132499126,132499734,132500794,132502289,132503214,132505302,132507237,132511067,132513008,132514571,132516422,132516704,132522828,132523157,132523540,132525610,132526141,132528189,132530998,132538176	132417760,132434618,132446550,132447470,132447939,132450847,132453504,132453694,132454157,132456401,132456580,132456832,132457368,132460357,132461205,132462523,132463817,132466070,132466394,132467313,132473227,132475085,132477892,132478140,132479289,132480470,132482330,132483577,132484672,132488452,132489021,132491051,132492615,132494259,132495166,132496663,132499310,132499808,132500913,132502468,132503381,132505415,132507353,132511244,132513099,132514670,132516496,132516816,132522997,132523199,132523713,132525789,132526281,132528332,132531097,132539032	Gene ID= ENSG00000138246.15 TPM= 11.58 Transcript Type= protein_coding
chr3	132558144	132660723	132558144	132660723	-	ENST00000264990.10@ACAD11	ENST00000264990.10	protein_coding	132659603,132644797,132642677,132641972,132639492,132631341,132630437,132628340,132626691,132619468,132618634,132605098,132603229,132579492,132578796,132576944,132575772,132561101,132559833,132558144	132660723,132644896,132642802,132642133,132639656,132631479,132630558,132628446,132626817,132619545,132618772,132605205,132603327,132579558,132578881,132577015,132575926,132561217,132559942,132559085	Gene ID= ENSG00000240303.7 TPM= 6.76 Transcript Type= protein_coding
chr3	132660329	132677782	132660329	132677782	+	transcript4658.chr3.nic@UBA5	transcript4658.chr3.nic	protein_coding	132660329,132668818,132670198,132670965,132671777,132672050,132675248,132675605,132675817,132676443	132660698,132668927,132670284,132671049,132671881,132672177,132675383,132675680,132675923,132677782	Gene ID= ENSG00000081307.12 TPM= 2.9 Transcript Type= NA
chr3	133038402	133396228	133038402	133396228	+	ENST00000393130.7@TMEM108	ENST00000393130.7	protein_coding	133038402,133045902,133229270,133379752,133390180,133395864	133038435,133046020,133229351,133381161,133390334,133396228	Gene ID= ENSG00000144868.13 TPM= 7.72 Transcript Type= protein_coding
chr3	133573542	133590261	133573542	133590261	+	transcript4680.chr3.nic@CDV3	transcript4680.chr3.nic	protein_coding	133573542,133575039,133584002,133586563,133588353	133574284,133575115,133584150,133586722,133590261	Gene ID= ENSG00000091527.15 TPM= 155.9 Transcript Type= NA
chr3	133573730	133590261	133573730	133590261	+	ENST00000264993.7@CDV3	ENST00000264993.7	protein_coding	133573730,133575039,133584002,133586563,133587896	133574284,133575115,133584150,133586722,133590261	Gene ID= ENSG00000091527.15 TPM= 115.35 Transcript Type= protein_coding
chr3	133784033	133821492	133784033	133821492	+	ENST00000466490.6@SRPRB	ENST00000466490.6	protein_coding	133784033,133805676,133806609,133807746,133811117,133815590,133816878,133819553	133784144,133806002,133806703,133807823,133811199,133815726,133816932,133821492	Gene ID= ENSG00000144867.11 TPM= 19.31 Transcript Type= protein_coding
chr3	133932696	134030076	133932696	134030076	-	ENST00000310926.8@SLCO2A1	ENST00000310926.8	protein_coding	134029707,133979481,133973663,133954966,133953663,133951208,133948893,133948536,133947256,133945095,133942605,133938429,133935774,133932696	134030076,133979618,133973825,133955193,133953761,133951344,133948971,133948700,133947445,133945260,133942768,133938493,133935897,133934830	Gene ID= ENSG00000174640.12 TPM= 4.83 Transcript Type= protein_coding
chr3	134157134	134250812	134157134	134250812	-	transcript4706.chr3.nnic@RYK	transcript4706.chr3.nnic	protein_coding	134250690,134250423,134222418,134211508,134209695,134207472,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157134	134250812,134250583,134222539,134211607,134209829,134207525,134202874,134195182,134191983,134188923,134183071,134178073,134176039,134175768,134159373,134158264	Gene ID= ENSG00000163785.12 TPM= 5.15 Transcript Type= NA
chr3	134157134	134250908	134157134	134250908	-	transcript4720.chr3.nnic@RYK	transcript4720.chr3.nnic	protein_coding	134250423,134222418,134211508,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157134	134250908,134222539,134211607,134202874,134195182,134191983,134188923,134183071,134178073,134176039,134175768,134159373,134158264	Gene ID= ENSG00000163785.12 TPM= 4.18 Transcript Type= NA
chr3	134157133	134250744	134157133	134250744	-	ENST00000623711.3@RYK	ENST00000623711.3	protein_coding	134250423,134222418,134211508,134209695,134207472,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157133	134250744,134222539,134211607,134209829,134207525,134202874,134195182,134191974,134188923,134183071,134178073,134176039,134175768,134159373,134158264	Gene ID= ENSG00000163785.12 TPM= 7.08 Transcript Type= protein_coding
chr3	134355874	134374594	134355874	134374594	-	ENST00000249883.9@AMOTL2	ENST00000249883.9	protein_coding	134374342,134370700,134367497,134366283,134365817,134361512,134360106,134359283,134358540,134355874	134374594,134371494,134367803,134366427,134365909,134361807,134360413,134359503,134358719,134357763	Gene ID= ENSG00000114019.14 TPM= 44.4 Transcript Type= protein_coding
chr3	134355877	134374447	134355877	134374447	-	ENST00000422605.6@AMOTL2	ENST00000422605.6	protein_coding	134374342,134370700,134367497,134366283,134365817,134361512,134360106,134359283,134358540,134355877	134374447,134371494,134367803,134366427,134365909,134361807,134360413,134359503,134358716,134357763	Gene ID= ENSG00000114019.14 TPM= 7.72 Transcript Type= protein_coding
chr3	134477706	134486023	134477706	134486023	-	ENST00000510994.5@ANAPC13	ENST00000510994.5	protein_coding	134485320,134482806,134477706	134486023,134482931,134478715	Gene ID= ENSG00000129055.12 TPM= 16.25 Transcript Type= protein_coding
chr3	134477708	134486026	134477708	134486026	-	ENST00000354910.9@ANAPC13	ENST00000354910.9	protein_coding	134485952,134482806,134477708	134486026,134482931,134478715	Gene ID= ENSG00000129055.12 TPM= 42.79 Transcript Type= protein_coding
chr3	134477711	134485989	134477711	134485989	-	ENST00000514612.5@ANAPC13	ENST00000514612.5	protein_coding	134485701,134482806,134477711	134485989,134482931,134478715	Gene ID= ENSG00000129055.12 TPM= 2.73 Transcript Type= protein_coding
chr3	134485714	134561768	134485714	134561768	+	transcript4738.chr3.nic@CEP63	transcript4738.chr3.nic	protein_coding	134485714,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134547335,134549062,134550063,134551926,134561377	134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134547472,134549176,134550260,134552012,134561768	Gene ID= ENSG00000182923.16 TPM= 2.25 Transcript Type= NA
chr3	134486043	134561768	134486043	134561768	+	transcript4746.chr3.nic@CEP63	transcript4746.chr3.nic	protein_coding	134486043,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134561377	134486202,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134561768	Gene ID= ENSG00000182923.16 TPM= 3.21 Transcript Type= NA
chr3	134486200	134575011	134486200	134575011	+	transcript4748.chr3.nic@CEP63	transcript4748.chr3.nic	protein_coding	134486200,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134574793	134486556,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134575011	Gene ID= ENSG00000182923.16 TPM= 1.93 Transcript Type= NA
chr3	134485743	134561768	134485743	134561768	+	ENST00000332047.9@CEP63	ENST00000332047.9	protein_coding	134485743,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134561377	134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134561768	Gene ID= ENSG00000182923.16 TPM= 15.76 Transcript Type= protein_coding
chr3	134485791	134575011	134485791	134575011	+	ENST00000354446.7@CEP63	ENST00000354446.7	protein_coding	134485791,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134574793	134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134575011	Gene ID= ENSG00000182923.16 TPM= 4.83 Transcript Type= protein_coding
chr3	134795262	135260467	134795262	135260467	+	ENST00000398015.7@EPHB1	ENST00000398015.7	protein_coding	134795262,134925816,134951371,135106448,135132714,135154152,135162018,135165968,135166942,135179860,135192576,135201474,135241148,135248316,135249336,135259012	134795689,134925880,134952052,135106603,135133049,135154276,135162180,135166076,135167006,135179982,135192823,135201689,135241297,135248509,135249491,135260467	Gene ID= ENSG00000154928.16 TPM= 3.86 Transcript Type= protein_coding
chr3	135965673	136147891	135965673	136147891	+	ENST00000264977.7@PPP2R3A	ENST00000264977.7	protein_coding	135965673,136001059,136026832,136040859,136049259,136070478,136078367,136082265,136087883,136090578,136102007,136103258,136106216,136145043	135965849,136003493,136027098,136040962,136049361,136070552,136078453,136082421,136087931,136090667,136102182,136103376,136106322,136147891	Gene ID= ENSG00000073711.10 TPM= 22.2 Transcript Type= protein_coding
chr3	136250340	136332587	136250340	136332587	+	transcript4789.chr3.nnic@PCCB	transcript4789.chr3.nnic	protein_coding	136250340,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905,136331977	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136331364,136332587	Gene ID= ENSG00000114054.13 TPM= 1.93 Transcript Type= NA
chr3	136250306	136330169	136250306	136330169	+	ENST00000251654.8@PCCB	ENST00000251654.8	protein_coding	136250306,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 51 Transcript Type= protein_coding
chr3	136250355	136330169	136250355	136330169	+	ENST00000484181.5@PCCB	ENST00000484181.5	protein_coding	136250355,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327634,136328758,136329905	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr3	136250355	136330169	136250355	136330169	+	ENST00000490504.5@PCCB	ENST00000490504.5	protein_coding	136250355,136255856,136256555,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905	136250558,136255975,136256623,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 5.63 Transcript Type= protein_coding
chr3	136250355	136330169	136250355	136330169	+	ENST00000466072.5@PCCB	ENST00000466072.5	protein_coding	136250355,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326326,136326803,136327155,136327634,136328758,136329905	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326385,136326910,136327255,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 6.11 Transcript Type= protein_coding
chr3	136336233	136752368	136336233	136752368	-	ENST00000383202.6@STAG1	ENST00000383202.6	protein_coding	136752195,136630870,136623146,136604309,136568765,136542119,136521213,136502628,136500223,136477289,136473539,136472413,136464881,136452033,136443287,136433556,136422952,136422768,136422410,136421093,136417885,136398749,136377660,136369108,136366943,136363366,136359148,136357720,136349158,136343832,136341441,136340491,136338370,136336233	136752368,136630981,136623248,136604473,136568861,136542195,136521417,136502779,136500296,136477412,136473637,136472492,136464988,136452147,136443404,136433659,136423044,136422857,136422613,136421163,136417972,136398829,136377752,136369282,136367082,136363467,136359296,136357848,136349363,136344006,136341551,136340605,136338450,136338277	Gene ID= ENSG00000118007.12 TPM= 3.86 Transcript Type= protein_coding
chr3	136819084	136855888	136819084	136855888	+	ENST00000393079.3@SLC35G2	ENST00000393079.3	protein_coding	136819084,136854443	136819214,136855888	Gene ID= ENSG00000168917.8 TPM= 1.93 Transcript Type= protein_coding
chr3	136862208	136949126	136862208	136949126	+	ENST00000481752.5@NCK1	ENST00000481752.5	protein_coding	136862208,136927984,136945583,136948259	136862353,136928227,136946295,136949126	Gene ID= ENSG00000158092.6 TPM= 9.17 Transcript Type= protein_coding
chr3	136862208	136949126	136862208	136949126	+	ENST00000288986.6@NCK1	ENST00000288986.6	protein_coding	136862208,136927984,136945583,136948259	136862319,136928227,136946295,136949126	Gene ID= ENSG00000158092.6 TPM= 17.86 Transcript Type= protein_coding
chr3	138161012	138174949	138161012	138174949	-	ENST00000260803.8@DBR1	ENST00000260803.8	protein_coding	138174599,138173502,138171633,138170107,138167081,138163778,138163349,138161012	138174949,138173626,138171713,138170192,138167305,138163858,138163494,138162582	Gene ID= ENSG00000138231.12 TPM= 3.86 Transcript Type= protein_coding
chr3	138187267	138296549	138187267	138296549	+	ENST00000481646.5@ARMC8	ENST00000481646.5	protein_coding	138187267,138188455,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138188530,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138296549	Gene ID= ENSG00000114098.17 TPM= 4.18 Transcript Type= protein_coding
chr3	138187284	138298389	138187284	138298389	+	ENST00000469044.5@ARMC8	ENST00000469044.5	protein_coding	138187284,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138298389	Gene ID= ENSG00000114098.17 TPM= 9.17 Transcript Type= protein_coding
chr3	138187284	138296549	138187284	138296549	+	transcript4836.chr3.nic@ARMC8	transcript4836.chr3.nic	protein_coding	138187284,138188455,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138188530,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138296549	Gene ID= ENSG00000114098.17 TPM= 3.86 Transcript Type= NA
chr3	138187294	138296549	138187294	138296549	+	transcript4851.chr3.nic@ARMC8	transcript4851.chr3.nic	protein_coding	138187294,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138296549	Gene ID= ENSG00000114098.17 TPM= 8.37 Transcript Type= NA
chr3	138187294	138296549	138187294	138296549	+	transcript4857.chr3.nic@ARMC8	transcript4857.chr3.nic	protein_coding	138187294,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138296549	Gene ID= ENSG00000114098.17 TPM= 3.21 Transcript Type= NA
chr3	138187282	138236749	138187282	138236749	+	transcript4864.chr3.nic@ARMC8	transcript4864.chr3.nic	protein_coding	138187282,138209817,138221926,138223389,138223636,138228918,138235034	138187599,138209893,138221997,138223531,138223733,138229010,138236749	Gene ID= ENSG00000114098.17 TPM= 3.38 Transcript Type= NA
chr3	138348578	138405533	138348578	138405533	+	transcript4873.chr3.nnic@MRAS	transcript4873.chr3.nnic	protein_coding	138348578,138372866,138397324,138398469,138399712,138400534,138402170	138348767,138373076,138397477,138398568,138399796,138400613,138405533	Gene ID= ENSG00000158186.12 TPM= 19.62 Transcript Type= NA
chr3	138347697	138405533	138347697	138405533	+	ENST00000289104.8@MRAS	ENST00000289104.8	protein_coding	138347697,138372866,138397324,138398469,138400534,138402170	138348325,138373076,138397477,138398568,138400613,138405533	Gene ID= ENSG00000158186.12 TPM= 21.56 Transcript Type= protein_coding
chr3	138348472	138403131	138348472	138403131	+	ENST00000423968.6@MRAS	ENST00000423968.6	protein_coding	138348472,138372866,138397324,138398469,138400534,138402170	138348767,138373076,138397477,138398568,138400613,138403131	Gene ID= ENSG00000158186.12 TPM= 11.58 Transcript Type= protein_coding
chr3	138348580	138350964	138348580	138350964	+	transcript4895.chr3.nnic@MRAS	transcript4895.chr3.nnic	protein_coding	138348580,138349247,138349684	138349032,138349379,138350964	Gene ID= ENSG00000158186.12 TPM= 3.86 Transcript Type= NA
chr3	138348654	138352475	138348654	138352475	+	transcript4897.chr3.nnic@MRAS	transcript4897.chr3.nnic	protein_coding	138348654,138349212,138349684	138349032,138349379,138352475	Gene ID= ENSG00000158186.12 TPM= 6.27 Transcript Type= NA
chr3	138348579	138350964	138348579	138350964	+	transcript4899.chr3.nnic@MRAS	transcript4899.chr3.nnic	protein_coding	138348579,138349684	138348767,138350964	Gene ID= ENSG00000158186.12 TPM= 6.76 Transcript Type= NA
chr3	138348579	138352477	138348579	138352477	+	transcript4902.chr3.nnic@MRAS	transcript4902.chr3.nnic	protein_coding	138348579,138349684	138348767,138352477	Gene ID= ENSG00000158186.12 TPM= 8.21 Transcript Type= NA
chr3	138373255	138373421	138373255	138373421	+	transcript4905.chr3.nnic@NA	transcript4905.chr3.nnic	NA	138373255	138373421	Gene ID= novel_gene_chr3_4906 TPM= 1.93 Transcript Type= NA
chr3	138495013	138594339	138495013	138594339	-	ENST00000474781.5@CEP70	ENST00000474781.5	protein_coding	138594198,138591854,138572859,138571266,138571034,138570318,138537178,138532514,138529375,138529199,138525490,138508439,138505295,138500735,138500399,138500110,138498031,138495013	138594339,138591956,138572914,138571356,138571157,138570498,138537347,138532570,138529462,138529287,138525564,138508544,138505465,138500881,138500567,138500224,138498110,138495076	Gene ID= ENSG00000114107.8 TPM= 1.93 Transcript Type= protein_coding
chr3	138499884	138594248	138499884	138594248	-	ENST00000481834.5@CEP70	ENST00000481834.5	protein_coding	138594198,138591854,138572859,138571266,138571034,138570318,138537178,138532514,138529375,138529199,138525490,138508439,138505295,138500735,138500399,138499884	138594248,138591956,138572932,138571356,138571157,138570498,138537347,138532570,138529462,138529287,138525564,138508544,138505465,138500881,138500567,138500224	Gene ID= ENSG00000114107.8 TPM= 1.93 Transcript Type= protein_coding
chr3	138654020	138834964	138654020	138834964	-	transcript4911.chr3.nic@PIK3CB	transcript4911.chr3.nic	protein_coding	138834695,138796463,138770051,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654020	138834964,138796567,138770117,138759359,138755979,138742781,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526	Gene ID= ENSG00000051382.8 TPM= 6.11 Transcript Type= NA
chr3	138654020	138834964	138654020	138834964	-	transcript4917.chr3.nic@PIK3CB	transcript4917.chr3.nic	protein_coding	138834695,138796463,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654020	138834964,138796567,138759359,138755979,138742781,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526	Gene ID= ENSG00000051382.8 TPM= 19.62 Transcript Type= NA
chr3	138654020	138834964	138654020	138834964	-	transcript4924.chr3.nnic@PIK3CB	transcript4924.chr3.nnic	protein_coding	138834695,138796463,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654020	138834964,138796567,138759359,138755979,138742781,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526	Gene ID= ENSG00000051382.8 TPM= 4.18 Transcript Type= NA
chr3	138654068	138834917	138654068	138834917	-	ENST00000462898.5@PIK3CB	ENST00000462898.5	protein_coding	138834695,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654068	138834917,138759359,138755979,138742755,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526	Gene ID= ENSG00000051382.8 TPM= 7.72 Transcript Type= nonsense_mediated_decay
chr3	139005806	139357046	139005806	139357046	+	ENST00000495075.5@MRPS22	ENST00000495075.5	protein_coding	139005806,139180290,139343956,139346878,139348160,139350179,139350977,139352647,139355682,139356919	139006095,139180360,139344198,139347044,139348324,139350322,139351060,139352792,139355790,139357046	Gene ID= ENSG00000175110.11 TPM= 65.16 Transcript Type= protein_coding
chr3	139344027	139357033	139344027	139357033	+	ENST00000465056.5@MRPS22	ENST00000465056.5	protein_coding	139344027,139346881,139348160,139350179,139350977,139352647,139355682,139356919	139344198,139347044,139348324,139350322,139351060,139352792,139355790,139357033	Gene ID= ENSG00000175110.11 TPM= 4.34 Transcript Type= protein_coding
chr3	139353944	139356152	139353944	139356152	-	transcript4958.chr3.nnic@NA	transcript4958.chr3.nnic	NA	139353944	139356152	Gene ID= novel_gene_chr3_4959 TPM= 1.93 Transcript Type= NA
chr3	139357593	139389671	139357593	139389671	-	transcript4938.chr3.nic@COPB2	transcript4938.chr3.nic	protein_coding	139389548,139385004,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357593	139389671,139385200,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958	Gene ID= ENSG00000184432.9 TPM= 1.93 Transcript Type= NA
chr3	139357406	139389732	139357406	139389732	-	ENST00000333188.9@COPB2	ENST00000333188.9	protein_coding	139389548,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357406	139389732,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958	Gene ID= ENSG00000184432.9 TPM= 2.9 Transcript Type= protein_coding
chr3	139357593	139389649	139357593	139389649	-	transcript4942.chr3.nic@COPB2	transcript4942.chr3.nic	protein_coding	139389469,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357593	139389649,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958	Gene ID= ENSG00000184432.9 TPM= 5.79 Transcript Type= NA
chr3	139357593	139389671	139357593	139389671	-	transcript4944.chr3.nnic@COPB2	transcript4944.chr3.nnic	protein_coding	139389548,139385004,139383298,139379380,139379047,139378041,139375468,139374489,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357593	139389671,139385200,139383435,139379466,139379173,139378189,139375614,139374588,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958	Gene ID= ENSG00000184432.9 TPM= 1.93 Transcript Type= NA
chr3	139517434	139539829	139517434	139539829	-	ENST00000232219.6@RBP1	ENST00000232219.6	protein_coding	139539460,139538781,139518421,139517434	139539829,139538959,139518522,139517680	Gene ID= ENSG00000114115.9 TPM= 1.93 Transcript Type= protein_coding
chr3	139560180	139678016	139560180	139678016	-	transcript4963.chr3.nnic@NMNAT3	transcript4963.chr3.nnic	protein_coding	139677705,139637963,139634611,139627616,139578872,139573598,139560180	139678016,139638062,139634647,139627764,139579055,139573680,139561392	Gene ID= ENSG00000163864.15 TPM= 2.41 Transcript Type= NA
chr3	139560180	139677990	139560180	139677990	-	transcript4964.chr3.nic@NMNAT3	transcript4964.chr3.nic	protein_coding	139677705,139672603,139637963,139627616,139578872,139573598,139560180	139677990,139672712,139638062,139627764,139579055,139573680,139561392	Gene ID= ENSG00000163864.15 TPM= 5.31 Transcript Type= NA
chr3	140941801	140979939	140941801	140979939	+	transcript4975.chr3.nic@SLC25A36	transcript4975.chr3.nic	protein_coding	140941801,140956527,140959463,140963127,140966934,140970927,140973716,140976260	140942095,140956691,140959540,140963227,140967036,140970993,140974005,140979939	Gene ID= ENSG00000114120.11 TPM= 1.93 Transcript Type= NA
chr3	140941830	140979933	140941830	140979933	+	ENST00000446041.6@SLC25A36	ENST00000446041.6	protein_coding	140941830,140956527,140959463,140963127,140970927,140973716,140976263	140942095,140956691,140959540,140963227,140970993,140974005,140979933	Gene ID= ENSG00000114120.11 TPM= 7.72 Transcript Type= protein_coding
chr3	140941887	140976650	140941887	140976650	+	ENST00000324194.10@SLC25A36	ENST00000324194.10	protein_coding	140941887,140956527,140959463,140963127,140970927,140973716,140976260	140942095,140956691,140959540,140963227,140970993,140974005,140976650	Gene ID= ENSG00000114120.11 TPM= 1.93 Transcript Type= protein_coding
chr3	140941887	140966211	140941887	140966211	+	ENST00000507429.5@SLC25A36	ENST00000507429.5	protein_coding	140941887,140956527,140959463,140963127	140942095,140956691,140959540,140966211	Gene ID= ENSG00000114120.11 TPM= 2.9 Transcript Type= protein_coding
chr3	141368503	141446097	141368503	141446097	+	transcript4996.chr3.nic@ZBTB38	transcript4996.chr3.nic	protein_coding	141368503,141369872,141381425,141386872,141403927,141442389	141368804,141369946,141381487,141386937,141404031,141446097	Gene ID= ENSG00000177311.11 TPM= 5.96 Transcript Type= NA
chr3	141432108	141446097	141432108	141446097	+	transcript5003.chr3.nnic@ZBTB38	transcript5003.chr3.nnic	protein_coding	141432108,141438268,141442389	141432243,141438365,141446097	Gene ID= ENSG00000177311.11 TPM= 5.47 Transcript Type= NA
chr3	141443756	141448704	141443756	141448704	+	transcript5006.chr3.nnic@NA	transcript5006.chr3.nnic	NA	141443756	141448704	Gene ID= novel_gene_chr3_5007 TPM= 25.42 Transcript Type= NA
chr3	141738204	141747560	141738204	141747560	+	ENST00000273480.3@RNF7	ENST00000273480.3	protein_coding	141738204,141743509,141745159	141738516,141743556,141747560	Gene ID= ENSG00000114125.13 TPM= 213.33 Transcript Type= protein_coding
chr3	141738297	141745702	141738297	141745702	+	ENST00000393000.3@RNF7	ENST00000393000.3	protein_coding	141738297,141743509,141745159	141738509,141743556,141745702	Gene ID= ENSG00000114125.13 TPM= 206.58 Transcript Type= protein_coding
chr3	141738277	141745700	141738277	141745700	+	ENST00000480908.1@RNF7	ENST00000480908.1	protein_coding	141738277,141745159	141738516,141745700	Gene ID= ENSG00000114125.13 TPM= 2.9 Transcript Type= protein_coding
chr3	141876643	141926198	141876643	141926198	+	transcript5022.chr3.nnic@ATP1B3	transcript5022.chr3.nnic	protein_coding	141876643,141896929,141902136,141903620,141907167,141913652,141915970,141916555,141921977,141925531	141876910,141897230,141902227,141903748,141907274,141913836,141916020,141916574,141922063,141926198	Gene ID= ENSG00000069849.10 TPM= 1.93 Transcript Type= NA
chr3	141876614	141926484	141876614	141926484	+	ENST00000286371.7@ATP1B3	ENST00000286371.7	protein_coding	141876614,141903620,141907167,141913652,141915970,141921977,141925531	141876910,141903748,141907274,141913836,141916020,141922063,141926484	Gene ID= ENSG00000069849.10 TPM= 1.93 Transcript Type= protein_coding
chr3	141876616	141926514	141876616	141926514	+	ENST00000465172.5@ATP1B3	ENST00000465172.5	protein_coding	141876616,141902136,141903620,141907167,141913652,141915970,141916555,141921977,141925531	141876910,141902227,141903748,141907274,141913836,141916020,141916574,141922063,141926514	Gene ID= ENSG00000069849.10 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr3	141974105	142149544	141974105	142149544	-	transcript5049.chr3.nic@TFDP2	transcript5049.chr3.nic	protein_coding	142149183,142101735,142093061,142005441,141995020,141993538,141978520,141974105	142149544,142101841,142093127,142005544,141995141,141993585,141978682,141974191	Gene ID= ENSG00000114126.17 TPM= 2.9 Transcript Type= NA
chr3	141952481	142149532	141952481	142149532	-	ENST00000467072.5@TFDP2	ENST00000467072.5	protein_coding	142149183,142101735,142093061,142054115,142005441,141995020,141993538,141978520,141974048,141970073,141963812,141959674,141952911,141952481	142149532,142101841,142093127,142054149,142005544,141995141,141993585,141978682,141974194,141970141,141963963,141959840,141953016,141952696	Gene ID= ENSG00000114126.17 TPM= 6.76 Transcript Type= protein_coding
chr3	142157527	142225607	142157527	142225607	-	ENST00000392993.6@GK5	ENST00000392993.6	protein_coding	142225309,142215599,142213526,142204695,142198802,142187704,142186452,142186194,142185929,142182923,142181461,142177482,142172353,142171419,142170325,142157527	142225607,142215692,142213601,142204788,142198933,142187779,142186513,142186267,142185989,142183049,142181565,142177576,142172456,142171478,142170458,142165770	Gene ID= ENSG00000175066.15 TPM= 1.93 Transcript Type= protein_coding
chr3	143001539	143060546	143001539	143060546	+	ENST00000473835.6@U2SURP	ENST00000473835.6	protein_coding	143001539,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143023975,143027149,143028340,143028483,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143054943,143056312	143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021385,143021555,143022662,143023064,143024018,143027253,143028406,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143055119,143060546	Gene ID= ENSG00000163714.17 TPM= 9.65 Transcript Type= protein_coding
chr3	143001570	143056846	143001570	143056846	+	transcript5072.chr3.nic@U2SURP	transcript5072.chr3.nic	protein_coding	143001570,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143023975,143027149,143028340,143028483,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143056312	143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021382,143021555,143022662,143023064,143024018,143027253,143028406,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143056846	Gene ID= ENSG00000163714.17 TPM= 2.41 Transcript Type= NA
chr3	143001168	143056500	143001168	143056500	+	ENST00000488497.7@U2SURP	ENST00000488497.7	protein_coding	143001168,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143027149,143028340,143028483,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143054943,143056312	143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021385,143021555,143022662,143023064,143027253,143028406,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143055119,143056500	Gene ID= ENSG00000163714.17 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr3	143001621	143056846	143001621	143056846	+	ENST00000493598.6@U2SURP	ENST00000493598.6	protein_coding	143001621,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143023975,143027149,143028340,143028487,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143054943,143056312	143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021382,143021555,143022662,143023064,143024018,143027253,143028410,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143055119,143056846	Gene ID= ENSG00000163714.17 TPM= 11.1 Transcript Type= protein_coding
chr3	143119331	143124014	143119331	143124014	+	ENST00000309575.4@CHST2	ENST00000309575.4	protein_coding	143119331,143120644	143120541,143124014	Gene ID= ENSG00000175040.5 TPM= 6.76 Transcript Type= protein_coding
chr3	143847594	143848469	143847594	143848469	-	ENST00000498717.2@SLC9A9	ENST00000498717.2	protein_coding	143848148,143847594	143848469,143847983	Gene ID= ENSG00000181804.14 TPM= 1.93 Transcript Type= processed_transcript
chr3	143971798	143992359	143971798	143992359	+	ENST00000315691.7@C3orf58	ENST00000315691.7	protein_coding	143971798,143985543,143989510	143972989,143985846,143992359	Gene ID= ENSG00000181744.8 TPM= 8.69 Transcript Type= protein_coding
chr3	146192339	146251179	146192339	146251179	-	ENST00000354952.6@PLSCR4	ENST00000354952.6	protein_coding	146250960,146222065,146220815,146206526,146201035,146199813,146196632,146195124,146192339	146251179,146222092,146220925,146206761,146201077,146200039,146196793,146195282,146194455	Gene ID= ENSG00000114698.14 TPM= 1.45 Transcript Type= protein_coding
chr3	146192339	146251179	146192339	146251179	-	ENST00000383083.6@PLSCR4	ENST00000383083.6	protein_coding	146250960,146222065,146220815,146206526,146196632,146195124,146192339	146251179,146222092,146220925,146206761,146196793,146195282,146194455	Gene ID= ENSG00000114698.14 TPM= 1.45 Transcript Type= protein_coding
chr3	146515180	146544864	146515180	146544864	-	ENST00000342435.8@PLSCR1	ENST00000342435.8	protein_coding	146544467,146536540,146533470,146528614,146525605,146521833,146521544,146517006,146515180	146544864,146536565,146533550,146528831,146525647,146522053,146521705,146517167,146516101	Gene ID= ENSG00000188313.12 TPM= 8.69 Transcript Type= protein_coding
chr3	148697871	148743003	148697871	148743003	+	ENST00000349243.7@AGTR1	ENST00000349243.7	protein_coding	148697871,148707944,148740989	148698127,148708027,148743003	Gene ID= ENSG00000144891.17 TPM= 5.79 Transcript Type= protein_coding
chr3	148697784	148743003	148697784	148743003	+	ENST00000497524.5@AGTR1	ENST00000497524.5	protein_coding	148697784,148740989	148698127,148743003	Gene ID= ENSG00000144891.17 TPM= 11.58 Transcript Type= protein_coding
chr3	148991341	149027632	148991341	149027632	+	ENST00000345003.8@GYG1	ENST00000345003.8	protein_coding	148991341,148994142,148996302,148996742,149009276,149024053,149026452,149026760	148991647,148994277,148996476,148996904,149009402,149024272,149026502,149027632	Gene ID= ENSG00000163754.17 TPM= 1.16 Transcript Type= protein_coding
chr3	148991452	149027632	148991452	149027632	+	ENST00000296048.10@GYG1	ENST00000296048.10	protein_coding	148991452,148994142,148996302,148996742,149009276,149024053,149026760	148991647,148994277,148996476,148996904,149009402,149024272,149027632	Gene ID= ENSG00000163754.17 TPM= 739.62 Transcript Type= protein_coding
chr3	148991408	149027668	148991408	149027668	+	ENST00000627418.2@GYG1	ENST00000627418.2	protein_coding	148991408,148994142,148996302,148996742,149024053,149026760	148991647,148994277,148996476,148996892,149024272,149027668	Gene ID= ENSG00000163754.17 TPM= 13.51 Transcript Type= protein_coding
chr3	148991558	149027631	148991558	149027631	+	ENST00000484197.5@GYG1	ENST00000484197.5	protein_coding	148991558,148994142,148996302,148996742,149009276,149026760	148991647,148994277,148996476,148996904,149009402,149027631	Gene ID= ENSG00000163754.17 TPM= 19.31 Transcript Type= protein_coding
chr3	149030120	149086530	149030120	149086530	-	transcript5119.chr3.nic@HLTF	transcript5119.chr3.nic	protein_coding	149086317,149084682,149075881,149074215,149073225,149071583,149071252,149068240,149064791,149063431,149060779,149060643,149059718,149055303,149050232,149048863,149048028,149046080,149042166,149041490,149040031,149039581,149039049,149034918,149032201,149030120	149086530,149084889,149076047,149074348,149073322,149071657,149071443,149068335,149064866,149063524,149060858,149060687,149059804,149055400,149050375,149049001,149048163,149046259,149042290,149041668,149040156,149039693,149039229,149034998,149032372,149031363	Gene ID= ENSG00000071794.15 TPM= 2.9 Transcript Type= NA
chr3	149129584	149173732	149129584	149173732	+	ENST00000296051.6@HPS3	ENST00000296051.6	protein_coding	149129584,149140004,149141017,149141295,149145354,149150599,149153494,149155107,149157350,149158666,149160046,149162148,149162690,149163842,149167034,149167893,149172095	149129940,149140498,149141188,149141380,149145546,149150680,149153648,149155215,149157531,149158846,149160279,149162333,149162878,149163949,149167240,149167983,149173732	Gene ID= ENSG00000163755.8 TPM= 2.9 Transcript Type= protein_coding
chr3	149318498	149333761	149318498	149333761	-	ENST00000296059.6@TM4SF18	ENST00000296059.6	protein_coding	149333513,149333206,149330330,149324880,149322256,149318498	149333761,149333399,149330419,149325022,149322436,149321492	Gene ID= ENSG00000163762.6 TPM= 1.93 Transcript Type= protein_coding
chr3	149369022	149377865	149369022	149377865	-	ENST00000305366.7@TM4SF1	ENST00000305366.7	protein_coding	149377371,149375680,149375443,149371687,149369022	149377865,149375769,149375588,149371867,149369880	Gene ID= ENSG00000169908.11 TPM= 54.06 Transcript Type= protein_coding
chr3	149520245	149658101	149520245	149658101	-	ENST00000360632.7@WWTR1	ENST00000360632.7	protein_coding	149657765,149656876,149572864,149542335,149527836,149526013,149520245	149658101,149657309,149573000,149542537,149527969,149526125,149520989	Gene ID= ENSG00000018408.14 TPM= 6.76 Transcript Type= protein_coding
chr3	149738470	149752499	149738470	149752499	-	ENST00000473414.5@COMMD2	ENST00000473414.5	protein_coding	149752378,149752210,149751403,149750678,149738470	149752499,149752287,149751485,149750851,149741718	Gene ID= ENSG00000114744.8 TPM= 9.65 Transcript Type= protein_coding
chr3	149812708	149962139	149812708	149962139	+	ENST00000392894.7@RNF13	ENST00000392894.7	protein_coding	149812708,149846011,149852516,149872029,149895473,149902072,149911978,149921134,149960056,149960740	149813353,149846140,149852596,149872154,149895560,149902162,149912083,149921227,149960136,149962139	Gene ID= ENSG00000082996.19 TPM= 32.82 Transcript Type= protein_coding
chr3	149964904	149971109	149964904	149971109	-	ENST00000239940.11@PFN2	ENST00000239940.11	protein_coding	149970725,149968358,149964904	149971109,149968550,149966586	Gene ID= ENSG00000070087.13 TPM= 549.7 Transcript Type= protein_coding
chr3	149964904	149970950	149964904	149970950	-	ENST00000452853.6@PFN2	ENST00000452853.6	protein_coding	149970725,149968358,149964904	149970950,149968550,149966264	Gene ID= ENSG00000070087.13 TPM= 136.54 Transcript Type= protein_coding
chr3	149964935	149970715	149964935	149970715	-	ENST00000481767.5@PFN2	ENST00000481767.5	protein_coding	149970619,149968358,149964935	149970715,149968550,149966264	Gene ID= ENSG00000070087.13 TPM= 1.16 Transcript Type= protein_coding
chr3	149966040	149970063	149966040	149970063	+	transcript5179.chr3.nnic@NA	transcript5179.chr3.nnic	NA	149966040	149970063	Gene ID= novel_gene_chr3_5180 TPM= 11.58 Transcript Type= NA
chr3	149969871	149973241	149969871	149973241	+	transcript5175.chr3.nnic@NA	transcript5175.chr3.nnic	NA	149969871	149973241	Gene ID= novel_gene_chr3_5176 TPM= 139.97 Transcript Type= NA
chr3	150411009	150460116	150411009	150460116	+	ENST00000466814.1@TSC22D2	ENST00000466814.1	protein_coding	150411009,150457076,150458376	150411308,150457127,150460116	Gene ID= ENSG00000196428.12 TPM= 2.9 Transcript Type= protein_coding
chr3	150542496	150546506	150542496	150546506	-	transcript5204.chr3.nnic@NA	transcript5204.chr3.nnic	NA	150542496	150546506	Gene ID= novel_gene_chr3_5205 TPM= 3.86 Transcript Type= NA
chr3	150565796	150603228	150565796	150603228	-	ENST00000490945.1@SERP1	ENST00000490945.1	protein_coding	150602944,150565796	150603228,150567106	Gene ID= ENSG00000120742.10 TPM= 2.9 Transcript Type= processed_transcript
chr3	150546694	150584242	150546694	150584242	+	ENST00000460851.5@EIF2A	ENST00000460851.5	protein_coding	150546694,150552356,150558388,150562542,150563515,150564299,150567693,150567902,150568176,150571958,150575649,150581618,150583200,150583846	150546830,150552425,150558462,150562660,150563614,150564381,150567766,150568046,150568292,150572529,150575762,150581746,150583265,150584242	Gene ID= ENSG00000144895.11 TPM= 133.21 Transcript Type= protein_coding
chr3	150603288	150630435	150603288	150630435	+	ENST00000471696.5@SELENOT	ENST00000471696.5	protein_coding	150603288,150622385,150623043,150624812,150627010,150627659	150603499,150622495,150623169,150624899,150627163,150630435	Gene ID= ENSG00000198843.12 TPM= 45.37 Transcript Type= protein_coding
chr3	150741127	150763377	150741127	150763377	-	ENST00000312960.3@SIAH2	ENST00000312960.3	protein_coding	150762433,150741127	150763377,150742698	Gene ID= ENSG00000181788.3 TPM= 58.88 Transcript Type= protein_coding
chr3	152268040	152465779	152268040	152465779	+	ENST00000282488.11@MBNL1	ENST00000282488.11	protein_coding	152268040,152299405,152414941,152432717,152445282,152446704,152447620,152455542,152456267,152459271,152462385	152269092,152300367,152415111,152432920,152445539,152446757,152447773,152455577,152456361,152459345,152465779	Gene ID= ENSG00000152601.17 TPM= 14.86 Transcript Type= protein_coding
chr3	152269391	152465780	152269391	152465780	+	transcript5238.chr3.nnic@MBNL1	transcript5238.chr3.nnic	protein_coding	152269391,152299405,152414941,152432717,152445282,152447620,152455542,152456267,152459271,152462385	152269778,152300367,152415111,152432920,152445539,152447773,152455577,152456361,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 9.79 Transcript Type= NA
chr3	152268468	152465780	152268468	152465780	+	ENST00000355460.6@MBNL1	ENST00000355460.6	protein_coding	152268468,152299405,152414941,152432717,152445282,152447620,152456267,152459271,152462385	152269092,152300367,152415111,152432920,152445539,152447773,152456361,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 17.75 Transcript Type= protein_coding
chr3	152298825	152465780	152298825	152465780	+	transcript5258.chr3.nic@MBNL1	transcript5258.chr3.nic	protein_coding	152298825,152299405,152414941,152432717,152445282,152447620,152456267,152459271,152462385	152299254,152300367,152415111,152432920,152445539,152447773,152456361,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 17.51 Transcript Type= NA
chr3	152298825	152302797	152298825	152302797	+	transcript5275.chr3.nic@MBNL1	transcript5275.chr3.nic	protein_coding	152298825,152299405,152301919	152299254,152300367,152302797	Gene ID= ENSG00000152601.17 TPM= 12.79 Transcript Type= NA
chr3	152268963	152465763	152268963	152465763	+	ENST00000324210.9@MBNL1	ENST00000324210.9	protein_coding	152268963,152299405,152414941,152432717,152445282,152447620,152455542,152456267,152459271,152462385	152269092,152300367,152415111,152432920,152445539,152447773,152455577,152456361,152459345,152465763	Gene ID= ENSG00000152601.17 TPM= 13.44 Transcript Type= protein_coding
chr3	152314378	152316543	152314378	152316543	-	transcript5289.chr3.nnic@NA	transcript5289.chr3.nnic	NA	152314378	152316543	Gene ID= novel_gene_chr3_5290 TPM= 2.9 Transcript Type= NA
chr3	152447445	152449118	152447445	152449118	-	transcript5293.chr3.nnic@NA	transcript5293.chr3.nnic	NA	152447445	152449118	Gene ID= novel_gene_chr3_5294 TPM= 1.93 Transcript Type= NA
chr3	152834853	152838051	152834853	152838051	+	transcript5295.chr3.nnic@NA	transcript5295.chr3.nnic	NA	152834853	152838051	Gene ID= novel_gene_chr3_5296 TPM= 1.93 Transcript Type= NA
chr3	153162211	153164724	153162211	153164724	+	transcript5297.chr3.nnic@NA	transcript5297.chr3.nnic	NA	153162211	153164724	Gene ID= novel_gene_chr3_5298 TPM= 8.69 Transcript Type= NA
chr3	154121360	154256575	154121360	154256575	+	ENST00000465093.5@ARHGEF26	ENST00000465093.5	protein_coding	154121360,154121942,154124410,154129574,154149389,154152772,154187685,154191289,154194644,154217869,154225856,154240370,154253116,154254720,154255331	154121519,154123075,154124449,154129719,154149445,154152932,154187837,154191418,154194718,154217958,154226010,154240579,154253183,154254824,154256575	Gene ID= ENSG00000114790.12 TPM= 1.93 Transcript Type= protein_coding
chr3	154271821	154275624	154271821	154275624	-	transcript5310.chr3.nnic@NA	transcript5310.chr3.nnic	NA	154271821	154275624	Gene ID= novel_gene_chr3_5311 TPM= 1.93 Transcript Type= NA
chr3	154301049	154325007	154301049	154325007	-	transcript5303.chr3.nic@DHX36	transcript5303.chr3.nic	protein_coding	154324174,154316039,154315046,154311636,154309653,154306216,154305094,154304806,154303329,154301049	154325007,154316163,154315280,154311674,154309823,154306295,154305168,154304972,154303410,154301127	Gene ID= ENSG00000174953.13 TPM= 42.47 Transcript Type= NA
chr3	155290229	155293775	155290229	155293775	-	ENST00000489090.1@DWORF	ENST00000489090.1	protein_coding	155293620,155290940,155290229	155293775,155291038,155290846	Gene ID= ENSG00000240045.1 TPM= 152.52 Transcript Type= protein_coding
chr3	155762617	155806351	155762617	155806351	-	ENST00000340171.6@C3orf33	ENST00000340171.6	protein_coding	155806139,155802532,155775701,155767509,155762617	155806351,155802591,155775848,155767669,155763918	Gene ID= ENSG00000174928.15 TPM= 13.51 Transcript Type= protein_coding
chr3	155826523	155854404	155826523	155854404	-	transcript5342.chr3.nic@SLC33A1	transcript5342.chr3.nic	protein_coding	155853223,155842432,155829688,155826523	155854404,155842619,155829903,155828377	Gene ID= ENSG00000169359.13 TPM= 1.93 Transcript Type= NA
chr3	155870501	155914534	155870501	155914534	+	transcript5348.chr3.nic@GMPS	transcript5348.chr3.nic	protein_coding	155870501,155893518,155897927,155903863,155906160,155910692,155911114,155914419	155870897,155893699,155898041,155903960,155906263,155910885,155911279,155914534	Gene ID= ENSG00000163655.15 TPM= 1.93 Transcript Type= NA
chr3	156538149	156540580	156538149	156540580	-	transcript5357.chr3.nnic@NA	transcript5357.chr3.nnic	NA	156538149	156540580	Gene ID= novel_gene_chr3_5358 TPM= 2.9 Transcript Type= NA
chr3	156540140	156555184	156540140	156555184	-	ENST00000265044.6@SSR3	ENST00000265044.6	protein_coding	156554957,156553655,156548905,156544308,156540140	156555184,156553781,156549003,156544439,156543269	Gene ID= ENSG00000114850.6 TPM= 55.99 Transcript Type= protein_coding
chr3	156543004	156555125	156543004	156555125	-	ENST00000476217.5@SSR3	ENST00000476217.5	protein_coding	156554957,156553655,156548905,156544294,156543004	156555125,156553781,156549003,156544439,156543269	Gene ID= ENSG00000114850.6 TPM= 12.55 Transcript Type= protein_coding
chr3	156671862	156674378	156671862	156674378	-	ENST00000492937.1@TIPARP-AS1	ENST00000492937.1	antisense_RNA	156674207,156671862	156674378,156672130	Gene ID= ENSG00000243926.1 TPM= 1.93 Transcript Type= antisense_RNA
chr3	156674342	156706770	156674342	156706770	+	ENST00000295924.11@TIPARP	ENST00000295924.11	protein_coding	156674342,156677657,156694020,156695865,156703424,156704684	156674796,156678614,156694188,156696025,156703702,156706770	Gene ID= ENSG00000163659.12 TPM= 3.86 Transcript Type= protein_coding
chr3	157146508	157159852	157146508	157159852	-	transcript5366.chr3.nic@CCNL1	transcript5366.chr3.nic	protein_coding	157159792,157159405,157158866,157157011,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157146508	157159852,157159479,157158975,157157083,157153156,157152241,157150381,157150169,157149977,157149596,157149385,157146607	Gene ID= ENSG00000163660.11 TPM= 1.93 Transcript Type= NA
chr3	157147739	157160148	157147739	157160148	-	transcript5367.chr3.nic@CCNL1	transcript5367.chr3.nic	protein_coding	157159792,157159405,157158866,157157011,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157147739	157160148,157159479,157158975,157157083,157153156,157152241,157150381,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 1.93 Transcript Type= NA
chr3	157146508	157160760	157146508	157160760	-	ENST00000461804.5@CCNL1	ENST00000461804.5	protein_coding	157159792,157159405,157158866,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157146508	157160760,157159479,157158975,157153156,157152241,157150381,157150169,157149977,157149596,157149385,157146607	Gene ID= ENSG00000163660.11 TPM= 4.83 Transcript Type= protein_coding
chr3	157150065	157160030	157150065	157160030	-	transcript5388.chr3.nic@CCNL1	transcript5388.chr3.nic	protein_coding	157159792,157159405,157158866,157157011,157150282,157150065	157160030,157159479,157158975,157157083,157153156,157150169	Gene ID= ENSG00000163660.11 TPM= 1.93 Transcript Type= NA
chr3	157150471	157160147	157150471	157160147	-	transcript5389.chr3.nic@CCNL1	transcript5389.chr3.nic	protein_coding	157159792,157159405,157158866,157156936,157153036,157150471	157160147,157159479,157158975,157157083,157153156,157152241	Gene ID= ENSG00000163660.11 TPM= 1.93 Transcript Type= NA
chr3	157174397	157177471	157174397	157177471	+	transcript5394.chr3.nnic@AC092944.1	transcript5394.chr3.nnic	processed_transcript	157174397,157174749	157174555,157177471	Gene ID= ENSG00000243176.5 TPM= 1.93 Transcript Type= NA
chr3	158110052	158544835	158110052	158544835	+	ENST00000295930.7@RSRC1	ENST00000295930.7	protein_coding	158110052,158122103,158123866,158203072,158298039,158354857,158460935,158537092,158543335,158544183	158110211,158122298,158123991,158203245,158298075,158354908,158461003,158537198,158543487,158544835	Gene ID= ENSG00000174891.12 TPM= 2.9 Transcript Type= protein_coding
chr3	158571171	158606456	158571171	158606456	+	transcript5407.chr3.nic@MLF1	transcript5407.chr3.nic	protein_coding	158571171,158588852,158592434,158593382,158596862,158598080,158600014,158602807,158605097	158571347,158588924,158592581,158593426,158596945,158598208,158600173,158602939,158606456	Gene ID= ENSG00000178053.17 TPM= 3.86 Transcript Type= NA
chr3	158571154	158606633	158571154	158606633	+	transcript5413.chr3.nic@MLF1	transcript5413.chr3.nic	protein_coding	158571154,158592434,158593382,158596862,158598080,158600014,158602807,158605097	158571347,158592581,158593426,158596945,158598208,158600173,158602939,158606633	Gene ID= ENSG00000178053.17 TPM= 1.93 Transcript Type= NA
chr3	158571164	158606459	158571164	158606459	+	ENST00000619577.4@MLF1	ENST00000619577.4	protein_coding	158571164,158592434,158593382,158596862,158598080,158600014,158602807,158605097	158571391,158592581,158593426,158596945,158598208,158600173,158602939,158606459	Gene ID= ENSG00000178053.17 TPM= 6.76 Transcript Type= protein_coding
chr3	158571191	158606460	158571191	158606460	+	transcript5419.chr3.nnic@MLF1	transcript5419.chr3.nnic	protein_coding	158571191,158588852,158592434,158593382,158596862,158598080,158600014,158605097	158571391,158588924,158592581,158593426,158596945,158598208,158600173,158606460	Gene ID= ENSG00000178053.17 TPM= 1.93 Transcript Type= NA
chr3	158571184	158606456	158571184	158606456	+	ENST00000359117.9@MLF1	ENST00000359117.9	protein_coding	158571184,158592434,158596862,158598080,158600014,158602807,158605097	158571391,158592581,158596945,158598208,158600173,158602939,158606456	Gene ID= ENSG00000178053.17 TPM= 2.9 Transcript Type= protein_coding
chr3	158571163	158606460	158571163	158606460	+	ENST00000355893.9@MLF1	ENST00000355893.9	protein_coding	158571163,158592434,158596862,158598080,158600014,158602807,158605097	158571347,158592581,158596945,158598208,158600173,158602939,158606460	Gene ID= ENSG00000178053.17 TPM= 1.93 Transcript Type= protein_coding
chr3	158607103	158609677	158607103	158609677	+	transcript5427.chr3.nnic@NA	transcript5427.chr3.nnic	NA	158607103	158609677	Gene ID= novel_gene_chr3_5428 TPM= 1.93 Transcript Type= NA
chr3	158644278	158692575	158644278	158692575	+	ENST00000486715.5@GFM1	ENST00000486715.5	protein_coding	158644278,158645629,158646165,158646743,158649041,158652096,158653310,158654547,158658922,158660874,158662628,158665337,158666304,158681995,158684524,158690163,158691139,158691336	158644715,158645781,158646297,158646947,158649157,158652246,158653467,158654631,158659059,158660975,158662684,158665474,158666386,158682157,158684668,158690323,158691192,158692575	Gene ID= ENSG00000168827.14 TPM= 132.49 Transcript Type= protein_coding
chr3	158644500	158692572	158644500	158692572	+	transcript5441.chr3.nnic@GFM1	transcript5441.chr3.nnic	protein_coding	158644500,158645629,158646165,158646743,158652096,158653310,158654547,158658922,158660874,158662628,158665337,158666304,158681995,158684524,158690163,158691139,158691336	158644715,158645781,158646297,158646947,158652246,158653467,158654631,158659059,158660975,158662684,158665474,158666386,158682157,158684668,158690323,158691192,158692572	Gene ID= ENSG00000168827.14 TPM= 30.17 Transcript Type= NA
chr3	158644597	158692569	158644597	158692569	+	ENST00000264263.9@GFM1	ENST00000264263.9	protein_coding	158644597,158645629,158646165,158646743,158649041,158650005,158652096,158653310,158654547,158658922,158660874,158662628,158665337,158666304,158681995,158684524,158690163,158691139,158691336	158644715,158645781,158646297,158646947,158649157,158650061,158652246,158653467,158654631,158659059,158660975,158662684,158665474,158666386,158682157,158684668,158690323,158691192,158692569	Gene ID= ENSG00000168827.14 TPM= 2.9 Transcript Type= protein_coding
chr3	158666414	158672693	158666414	158672693	-	ENST00000264265.3@LXN	ENST00000264265.3	protein_coding	158672350,158670957,158669433,158668996,158667012,158666414	158672693,158671019,158669610,158669132,158667074,158666744	Gene ID= ENSG00000079257.7 TPM= 2.9 Transcript Type= protein_coding
chr3	158695236	158695580	158695236	158695580	+	transcript5453.chr3.nnic@NA	transcript5453.chr3.nnic	NA	158695236	158695580	Gene ID= novel_gene_chr3_5454 TPM= 1.93 Transcript Type= NA
chr3	158696892	158732696	158696892	158732696	-	ENST00000237696.9@RARRES1	ENST00000237696.9	protein_coding	158732140,158713797,158710738,158704791,158697908,158696892	158732696,158713859,158710933,158704927,158697970,158697827	Gene ID= ENSG00000118849.9 TPM= 2.9 Transcript Type= protein_coding
chr3	158801257	158801935	158801257	158801935	-	ENST00000607044.1@AC080013.5	ENST00000607044.1	antisense_RNA	158801257	158801935	Gene ID= ENSG00000272247.1 TPM= 1.93 Transcript Type= antisense_RNA
chr3	158802051	158829716	158802051	158829716	+	ENST00000484166.5@MFSD1	ENST00000484166.5	protein_coding	158802051,158804319,158807040,158807396,158809179,158813965,158819649,158820215,158821597,158821984,158823428,158824124,158826015,158827280,158828979	158802315,158804371,158807082,158807463,158809287,158814067,158819747,158820326,158821653,158822140,158823525,158824236,158826062,158827337,158829716	Gene ID= ENSG00000118855.18 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr3	158802091	158829116	158802091	158829116	+	ENST00000264266.12@MFSD1	ENST00000264266.12	protein_coding	158802091,158804319,158805362,158807040,158807396,158809179,158813965,158819649,158820215,158821597,158821984,158823428,158824124,158826015,158827280,158828979	158802315,158804371,158805474,158807082,158807463,158809287,158814067,158819747,158820326,158821653,158822140,158823525,158824236,158826062,158827337,158829116	Gene ID= ENSG00000118855.18 TPM= 1.93 Transcript Type= protein_coding
chr3	159839861	159897360	159839861	159897360	+	ENST00000445224.6@SCHIP1	ENST00000445224.6	protein_coding	159839861,159866163,159886207,159887708,159888820,159892097,159896723	159840214,159866281,159886324,159887905,159888943,159892190,159897360	Gene ID= ENSG00000151967.18 TPM= 47.62 Transcript Type= protein_coding
chr3	159852939	159897349	159852939	159897349	+	ENST00000482804.1@SCHIP1	ENST00000482804.1	protein_coding	159852939,159866163,159886207,159887708,159888820,159892097,159896723	159853457,159866281,159886324,159887905,159888943,159892190,159897349	Gene ID= ENSG00000151967.18 TPM= 157.66 Transcript Type= protein_coding
chr3	160399304	160434962	160399304	160434962	+	ENST00000357388.7@SMC4	ENST00000357388.7	protein_coding	160399304,160400822,160401915,160402676,160404328,160411920,160412326,160413473,160414367,160416251,160417723,160419358,160420740,160423425,160423761,160424867,160426074,160428753,160430599,160431032,160431643,160432283,160433026,160433657	160399749,160400965,160402093,160402867,160404504,160412084,160412453,160413613,160414517,160416415,160417956,160419543,160420901,160423650,160423840,160425019,160426200,160428942,160430743,160431205,160431825,160432515,160433209,160434962	Gene ID= ENSG00000113810.15 TPM= 4.83 Transcript Type= protein_coding
chr3	160500167	160565571	160500167	160565571	-	transcript5493.chr3.nnic@KPNA4	transcript5493.chr3.nnic	protein_coding	160565214,160564521,160536796,160535808,160535661,160535513,160531462,160530855,160527953,160525938,160525800,160521779,160515452,160514077,160509800,160508107,160504958,160500167	160565571,160564640,160536840,160535897,160535690,160535565,160531557,160530940,160528039,160526107,160525844,160521910,160515580,160514181,160509871,160508269,160505052,160502202	Gene ID= ENSG00000186432.8 TPM= 16.41 Transcript Type= NA
chr3	160494995	160565588	160494995	160565588	-	ENST00000334256.8@KPNA4	ENST00000334256.8	protein_coding	160565214,160536796,160535808,160535661,160535513,160531462,160530855,160527953,160525938,160525800,160521779,160515452,160514077,160509800,160508107,160504958,160494995	160565588,160536840,160535897,160535690,160535565,160531557,160530940,160528039,160526107,160525844,160521910,160515580,160514181,160509871,160508269,160505052,160502202	Gene ID= ENSG00000186432.8 TPM= 35.72 Transcript Type= protein_coding
chr3	160565728	160569490	160565728	160569490	+	transcript5503.chr3.nnic@KRT8P12	transcript5503.chr3.nnic	transcribed_processed_pseudogene	160565728,160568178	160566153,160569490	Gene ID= ENSG00000229320.3 TPM= 3.86 Transcript Type= NA
chr3	160565766	160569488	160565766	160569488	+	transcript5504.chr3.nnic@NA	transcript5504.chr3.nnic	NA	160565766	160569488	Gene ID= novel_gene_chr3_5505 TPM= 16.41 Transcript Type= NA
chr3	160753428	160755142	160753428	160755142	-	ENST00000566372.1@AC069224.1	ENST00000566372.1	antisense_RNA	160753428	160755142	Gene ID= ENSG00000260572.1 TPM= 1.93 Transcript Type= antisense_RNA
chr3	160756208	161078907	160756208	161078907	+	ENST00000498165.5@PPM1L	ENST00000498165.5	protein_coding	160756208,160961736,161065403,161068811	160756707,160961910,161065564,161078907	Gene ID= ENSG00000163590.13 TPM= 11.58 Transcript Type= protein_coding
chr3	161221249	161252307	161221249	161252307	+	transcript5516.chr3.nic@NMD3	transcript5516.chr3.nic	protein_coding	161221249,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780	161221331,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252307	Gene ID= ENSG00000169251.12 TPM= 2.9 Transcript Type= NA
chr3	161221288	161252307	161221288	161252307	+	transcript5517.chr3.nic@NMD3	transcript5517.chr3.nic	protein_coding	161221288,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780	161221409,161222057,161225018,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252307	Gene ID= ENSG00000169251.12 TPM= 1.93 Transcript Type= NA
chr3	161221290	161252307	161221290	161252307	+	ENST00000351193.6@NMD3	ENST00000351193.6	protein_coding	161221290,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780	161221409,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252307	Gene ID= ENSG00000169251.12 TPM= 62.75 Transcript Type= protein_coding
chr3	161221311	161252307	161221311	161252307	+	transcript5521.chr3.nic@NMD3	transcript5521.chr3.nic	protein_coding	161221311,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780	161221724,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252307	Gene ID= ENSG00000169251.12 TPM= 3.86 Transcript Type= NA
chr3	167683910	167734939	167683910	167734939	-	ENST00000473645.6@PDCD10	ENST00000473645.6	protein_coding	167734806,167725401,167720062,167704842,167697009,167695596,167687615,167687234,167683910	167734939,167725473,167720273,167704895,167697126,167695722,167687693,167687316,167684389	Gene ID= ENSG00000114209.14 TPM= 9.65 Transcript Type= protein_coding
chr3	167683910	167734876	167683910	167734876	-	transcript5530.chr3.nic@PDCD10	transcript5530.chr3.nic	protein_coding	167734806,167734214,167720062,167704842,167697009,167695596,167687615,167687234,167683910	167734876,167734350,167720273,167704895,167697126,167695722,167687693,167687316,167684389	Gene ID= ENSG00000114209.14 TPM= 1.93 Transcript Type= NA
chr3	167683912	167734930	167683912	167734930	-	ENST00000497056.6@PDCD10	ENST00000497056.6	protein_coding	167734806,167720062,167704842,167697009,167695596,167687615,167687234,167683912	167734930,167720273,167704895,167697126,167695722,167687693,167687316,167684389	Gene ID= ENSG00000114209.14 TPM= 2.9 Transcript Type= protein_coding
chr3	168008677	168095975	168008677	168095975	-	ENST00000470487.5@GOLIM4	ENST00000470487.5	protein_coding	168095099,168048291,168046950,168044828,168043379,168041392,168040786,168036836,168032520,168029780,168029223,168027728,168024928,168024526,168010743,168008677	168095975,168048365,168046999,168044881,168043529,168041474,168040869,168036994,168032852,168030036,168029302,168027837,168025095,168024594,168010823,168010418	Gene ID= ENSG00000173905.8 TPM= 8.69 Transcript Type= protein_coding
chr3	169772831	169789181	169772831	169789181	+	ENST00000349841.9@MYNN	ENST00000349841.9	protein_coding	169772831,169774265,169778768,169780590,169782465,169783477,169784622,169786416	169773462,169774561,169779561,169780749,169782643,169783560,169784708,169789181	Gene ID= ENSG00000085274.15 TPM= 8.69 Transcript Type= protein_coding
chr3	169773389	169787544	169773389	169787544	+	transcript5559.chr3.nnic@MYNN	transcript5559.chr3.nnic	protein_coding	169773389,169774265,169778768,169780590,169782465,169784622,169786416	169773462,169774561,169779561,169780749,169782643,169784708,169787544	Gene ID= ENSG00000085274.15 TPM= 1.93 Transcript Type= NA
chr3	169966765	169998373	169966765	169998373	+	ENST00000337002.8@SEC62	ENST00000337002.8	protein_coding	169966765,169975608,169976946,169982707,169983161,169985805,169988240,169992594	169966858,169975716,169977051,169982911,169983253,169985865,169988359,169998373	Gene ID= ENSG00000008952.16 TPM= 8.69 Transcript Type= protein_coding
chr3	169966814	169982857	169966814	169982857	+	ENST00000487736.5@SEC62	ENST00000487736.5	protein_coding	169966814,169969287,169975608,169976946,169982707	169966858,169969383,169975716,169977051,169982857	Gene ID= ENSG00000008952.16 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr3	170222464	170303421	170222464	170303421	+	transcript5588.chr3.nnic@PRKCI	transcript5588.chr3.nnic	protein_coding	170222464,170235230,170259969,170263379,170267915,170270421,170273286,170275229,170280227,170281166,170281882,170284461,170285770,170291854,170293383,170295911,170297304,170298995,170303040	170222770,170235351,170260058,170263429,170268000,170270561,170273340,170275287,170280403,170281263,170281968,170284596,170285886,170291941,170293508,170295990,170297393,170299110,170303421	Gene ID= ENSG00000163558.12 TPM= 1.93 Transcript Type= NA
chr3	170222365	170305981	170222365	170305981	+	ENST00000295797.4@PRKCI	ENST00000295797.4	protein_coding	170222365,170235230,170259969,170263379,170267915,170270421,170273286,170275229,170280227,170281166,170281882,170284461,170291854,170293383,170295911,170297304,170298995,170303040	170222770,170235351,170260058,170263429,170268000,170270561,170273340,170275287,170280403,170281263,170281968,170284596,170291941,170293508,170295990,170297393,170299110,170305981	Gene ID= ENSG00000163558.12 TPM= 17.38 Transcript Type= protein_coding
chr3	170222392	170305977	170222392	170305977	+	transcript5595.chr3.nnic@PRKCI	transcript5595.chr3.nnic	protein_coding	170222392,170235230,170259969,170263379,170267915,170270421,170273286,170275229,170280227,170281166,170281882,170284461,170293383,170295911,170297304,170298995,170303040	170222770,170235351,170260058,170263429,170268000,170270561,170273340,170275287,170280403,170281263,170281968,170284596,170293508,170295990,170297393,170299110,170305977	Gene ID= ENSG00000163558.12 TPM= 1.93 Transcript Type= NA
chr3	170864875	170870483	170864875	170870483	-	ENST00000295830.12@RPL22L1	ENST00000295830.12	protein_coding	170870159,170868298,170868013,170864875	170870483,170868390,170868134,170866524	Gene ID= ENSG00000163584.17 TPM= 4.83 Transcript Type= protein_coding
chr3	170866263	170870195	170866263	170870195	-	ENST00000475836.5@RPL22L1	ENST00000475836.5	protein_coding	170870159,170868298,170868013,170866263	170870195,170868390,170868201,170866524	Gene ID= ENSG00000163584.17 TPM= 11.1 Transcript Type= nonsense_mediated_decay
chr3	170866268	170870195	170866268	170870195	-	ENST00000463836.1@RPL22L1	ENST00000463836.1	protein_coding	170870159,170868298,170868013,170866268	170870195,170868387,170868134,170866524	Gene ID= ENSG00000163584.17 TPM= 9.17 Transcript Type= protein_coding
chr3	171167115	171460426	171167115	171460426	-	transcript5612.chr3.nic@TNIK	transcript5612.chr3.nic	protein_coding	171460007,171369620,171228165,171211116,171194525,171190697,171188702,171177326,171175252,171167115	171460426,171369685,171228221,171211241,171194635,171190787,171188832,171177380,171175330,171167270	Gene ID= ENSG00000154310.16 TPM= 2.9 Transcript Type= NA
chr3	171346934	171460405	171346934	171460405	-	ENST00000465393.1@TNIK	ENST00000465393.1	protein_coding	171460007,171369620,171346934	171460405,171369685,171347218	Gene ID= ENSG00000154310.16 TPM= 1.93 Transcript Type= protein_coding
chr3	172039641	172187295	172039641	172187295	+	transcript5625.chr3.nnic@FNDC3B	transcript5625.chr3.nnic	protein_coding	172039641,172112452,172133471,172184245,172186712	172039771,172112590,172133546,172184383,172187295	Gene ID= ENSG00000075420.12 TPM= 1.93 Transcript Type= NA
chr3	172039613	172135004	172039613	172135004	+	transcript5629.chr3.nic@FNDC3B	transcript5629.chr3.nic	protein_coding	172039613,172112452,172133471	172039771,172112590,172135004	Gene ID= ENSG00000075420.12 TPM= 2.9 Transcript Type= NA
chr3	172039628	172398771	172039628	172398771	+	ENST00000415807.6@FNDC3B	ENST00000415807.6	protein_coding	172039628,172112452,172133471,172226871,172247533,172251260,172285926,172295363,172298728,172307363,172310828,172328952,172330541,172333089,172334944,172337330,172341113,172343011,172344086,172346327,172347212,172352803,172362633,172378270,172380966,172397164	172039771,172112590,172133546,172226947,172247776,172251541,172285984,172295514,172298787,172307501,172310881,172329076,172330715,172333175,172335082,172337401,172341231,172343116,172344258,172346440,172347361,172353083,172362845,172378436,172381093,172398771	Gene ID= ENSG00000075420.12 TPM= 5.79 Transcript Type= protein_coding
chr3	172039628	172187298	172039628	172187298	+	ENST00000421757.5@FNDC3B	ENST00000421757.5	protein_coding	172039628,172112452,172133471,172186712	172039771,172112590,172133546,172187298	Gene ID= ENSG00000075420.12 TPM= 6.76 Transcript Type= protein_coding
chr3	177023339	177197372	177023339	177197372	-	transcript5638.chr3.nic@TBL1XR1	transcript5638.chr3.nic	protein_coding	177197121,177160871,177098466,177064920,177053773,177051504,177050478,177049997,177047486,177047300,177046129,177038313,177038098,177034198,177032971,177026373,177023339	177197372,177160988,177098541,177065022,177053918,177051726,177050610,177050138,177047549,177047397,177046189,177038434,177038172,177034325,177033136,177026474,177025524	Gene ID= ENSG00000177565.16 TPM= 4.34 Transcript Type= NA
chr3	177095496	177197214	177095496	177197214	-	transcript5645.chr3.nic@TBL1XR1	transcript5645.chr3.nic	protein_coding	177197121,177095496	177197214,177098541	Gene ID= ENSG00000177565.16 TPM= 1.93 Transcript Type= NA
chr3	177023339	177197396	177023339	177197396	-	ENST00000457928.6@TBL1XR1	ENST00000457928.6	protein_coding	177197121,177098466,177064920,177053773,177051504,177050478,177049997,177047486,177047300,177046129,177038313,177038098,177034198,177032971,177026373,177023339	177197396,177098541,177065022,177053918,177051726,177050610,177050138,177047549,177047397,177046189,177038434,177038172,177034325,177033136,177026474,177025524	Gene ID= ENSG00000177565.16 TPM= 4.34 Transcript Type= protein_coding
chr3	179017223	179072279	179017223	179072279	-	ENST00000311417.6@ZMAT3	ENST00000311417.6	protein_coding	179071595,179067483,179030880,179027646,179027423,179017223	179072279,179067809,179030999,179027812,179027523,179025228	Gene ID= ENSG00000172667.10 TPM= 2.9 Transcript Type= protein_coding
chr3	179259720	179261470	179259720	179261470	-	transcript5654.chr3.nnic@NA	transcript5654.chr3.nnic	NA	179259720	179261470	Gene ID= novel_gene_chr3_5655 TPM= 2.9 Transcript Type= NA
chr3	179322320	179323661	179322320	179323661	-	transcript5691.chr3.nnic@NA	transcript5691.chr3.nnic	NA	179322320	179323661	Gene ID= novel_gene_chr3_5692 TPM= 2.9 Transcript Type= NA
chr3	179322938	179335040	179322938	179335040	+	transcript5674.chr3.nic@ZNF639	transcript5674.chr3.nic	protein_coding	179322938,179325042,179327561,179328283,179329618,179329934,179332989,179333269	179323291,179325322,179327631,179328351,179329728,179330055,179333123,179335040	Gene ID= ENSG00000121864.9 TPM= 3.86 Transcript Type= NA
chr3	179347692	179394931	179347692	179394931	+	ENST00000471841.5@MFN1	ENST00000471841.5	protein_coding	179347692,179348845,179351900,179358840,179362358,179364297,179365118,179367439,179368036,179375220,179377042,179377344,179378341,179378585,179385569,179386433,179390004,179391981	179347810,179348963,179352035,179359002,179362482,179364405,179365225,179367592,179368103,179375341,179377168,179377448,179378443,179378814,179385721,179386629,179390138,179394931	Gene ID= ENSG00000171109.18 TPM= 18.34 Transcript Type= protein_coding
chr3	179347695	179392653	179347695	179392653	+	transcript5666.chr3.nnic@MFN1	transcript5666.chr3.nnic	protein_coding	179347695,179348845,179351900,179358840,179362358,179364297,179365118,179367439,179368036,179377344,179378341,179378585,179385569,179386433,179390004,179391981	179347810,179348963,179352035,179359002,179362482,179364405,179365225,179367592,179368103,179377448,179378443,179378814,179385721,179386629,179390138,179392653	Gene ID= ENSG00000171109.18 TPM= 2.9 Transcript Type= NA
chr3	179396089	179451590	179396089	179451590	-	ENST00000232564.7@GNB4	ENST00000232564.7	protein_coding	179451346,179426144,179420889,179419399,179416493,179414885,179413715,179413412,179405190,179396089	179451590,179426242,179420927,179419505,179416556,179415047,179413781,179413613,179405406,179401319	Gene ID= ENSG00000114450.9 TPM= 1.93 Transcript Type= protein_coding
chr3	179562880	179588408	179562880	179588408	+	ENST00000429709.6@ACTL6A	ENST00000429709.6	protein_coding	179562880,179569824,179570067,179573369,179574370,179576217,179576620,179576824,179580640,179580894,179581140,179583353,179586546,179587930	179563117,179569900,179570241,179573469,179574467,179576311,179576726,179576913,179580701,179581008,179581220,179583448,179586632,179588408	Gene ID= ENSG00000136518.16 TPM= 8.69 Transcript Type= protein_coding
chr3	179562886	179588407	179562886	179588407	+	ENST00000450518.6@ACTL6A	ENST00000450518.6	protein_coding	179562886,179569824,179570067,179573369,179574370,179576217,179576620,179576824,179580640,179580894,179581140,179583353,179586546,179587930	179562973,179569900,179570241,179573469,179574467,179576311,179576726,179576913,179580701,179581008,179581220,179583448,179586632,179588407	Gene ID= ENSG00000136518.16 TPM= 4.83 Transcript Type= protein_coding
chr3	179588285	179604654	179588285	179604654	-	ENST00000476781.5@MRPL47	ENST00000476781.5	protein_coding	179604527,179602652,179601730,179598675,179593765,179592644,179588285	179604654,179602797,179601790,179598771,179593895,179592739,179588995	Gene ID= ENSG00000136522.13 TPM= 8.69 Transcript Type= protein_coding
chr3	179588831	179604649	179588831	179604649	-	ENST00000392659.2@MRPL47	ENST00000392659.2	protein_coding	179604527,179601730,179598675,179593765,179592644,179588831	179604649,179601790,179598771,179593895,179592739,179588995	Gene ID= ENSG00000136522.13 TPM= 9.65 Transcript Type= protein_coding
chr3	179604702	179624497	179604702	179624497	+	ENST00000259037.7@NDUFB5	ENST00000259037.7	protein_coding	179604702,179614971,179615983,179616983,179618415,179623920	179604939,179615059,179616049,179617044,179618521,179624497	Gene ID= ENSG00000136521.12 TPM= 55.02 Transcript Type= protein_coding
chr3	179604791	179627647	179604791	179627647	+	ENST00000493866.5@NDUFB5	ENST00000493866.5	protein_coding	179604791,179616983,179618415,179623920	179604939,179617044,179618521,179627647	Gene ID= ENSG00000136521.12 TPM= 33.79 Transcript Type= protein_coding
chr3	179652755	179789401	179652755	179789401	+	ENST00000263966.7@USP13	ENST00000263966.7	protein_coding	179652755,179681878,179690241,179701008,179706934,179708773,179719940,179721402,179730189,179730616,179740247,179742197,179745043,179752285,179754732,179757052,179761112,179764002,179765695,179781739,179784048	179653393,179682003,179690301,179701129,179707076,179708957,179720034,179721589,179730260,179730709,179740372,179742350,179745217,179752373,179754854,179757078,179761255,179764168,179765848,179781823,179789401	Gene ID= ENSG00000058056.8 TPM= 67.81 Transcript Type= protein_coding
chr3	180602130	180610978	180602130	180610978	+	ENST00000296015.8@TTC14	ENST00000296015.8	protein_coding	180602130,180602891,180603124,180604225,180604478,180604852,180605766,180606253,180606481,180607648,180608701,180609630	180602422,180603015,180603323,180604309,180604607,180605007,180605837,180606372,180606603,180607765,180608810,180610978	Gene ID= ENSG00000163728.10 TPM= 4.83 Transcript Type= protein_coding
chr3	180912461	180976579	180912461	180976579	+	transcript5784.chr3.nic@FXR1	transcript5784.chr3.nic	protein_coding	180912461,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180963028,180968051,180970158,180971075,180975313,180976122	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180962940,180963090,180968254,180970358,180971155,180975404,180976579	Gene ID= ENSG00000114416.17 TPM= 46.47 Transcript Type= NA
chr3	180912461	180976579	180912461	180976579	+	transcript5789.chr3.nic@FXR1	transcript5789.chr3.nic	protein_coding	180912461,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180968051,180970158,180971075,180975313,180976122	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180963090,180968254,180970358,180971155,180975404,180976579	Gene ID= ENSG00000114416.17 TPM= 114.37 Transcript Type= NA
chr3	180912302	180982753	180912302	180982753	+	ENST00000357559.8@FXR1	ENST00000357559.8	protein_coding	180912302,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180963028,180968051,180970158,180975313,180976122	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180962940,180963090,180968254,180970358,180975404,180982753	Gene ID= ENSG00000114416.17 TPM= 4.83 Transcript Type= protein_coding
chr3	180912482	180977155	180912482	180977155	+	ENST00000305586.11@FXR1	ENST00000305586.11	protein_coding	180912482,180914652,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180963028,180968051,180970158,180975313,180976122	180912736,180914995,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180962940,180963090,180968254,180970358,180975404,180977155	Gene ID= ENSG00000114416.17 TPM= 2.9 Transcript Type= protein_coding
chr3	180983709	180989773	180983709	180989773	-	ENST00000382564.6@DNAJC19	ENST00000382564.6	protein_coding	180989600,180988178,180988023,180986943,180985926,180983709	180989773,180988229,180988096,180987022,180985996,180984710	Gene ID= ENSG00000205981.6 TPM= 10.62 Transcript Type= protein_coding
chr3	182935353	182938372	182935353	182938372	+	transcript5839.chr3.nnic@NA	transcript5839.chr3.nnic	NA	182935353	182938372	Gene ID= novel_gene_chr3_5840 TPM= 2.9 Transcript Type= NA
chr3	182942776	182980538	182942776	182980538	-	ENST00000632685.1@DCUN1D1	ENST00000632685.1	protein_coding	182980487,182965537,182963881,182961226,182947550,182947238,182942776	182980538,182965753,182964049,182961356,182947632,182947334,182945173	Gene ID= ENSG00000043093.13 TPM= 3.86 Transcript Type= protein_coding
chr3	183015218	183099587	183015218	183099587	-	ENST00000265594.8@MCCC1	ENST00000265594.8	protein_coding	183099352,183094559,183092409,183086693,183072366,183071210,183070999,183057311,183052159,183045413,183041567,183039026,183037218,183033991,183025755,183022417,183020130,183017266,183015218	183099587,183094605,183092545,183086788,183072487,183071357,183071120,183057422,183052240,183045540,183041750,183039135,183037434,183034077,183025804,183022554,183020237,183017337,183015566	Gene ID= ENSG00000078070.12 TPM= 25.58 Transcript Type= protein_coding
chr3	183015218	183099539	183015218	183099539	-	transcript5843.chr3.nic@MCCC1	transcript5843.chr3.nic	protein_coding	183099352,183094559,183086693,183072366,183071210,183070999,183057311,183052159,183045413,183041567,183039026,183037218,183033991,183025755,183022417,183020130,183017266,183015218	183099539,183094605,183086788,183072487,183071357,183071120,183057422,183052240,183045540,183041750,183039135,183037434,183034077,183025804,183022554,183020237,183017337,183015566	Gene ID= ENSG00000078070.12 TPM= 2.41 Transcript Type= NA
chr3	183252710	183254728	183252710	183254728	-	transcript5854.chr3.nnic@NA	transcript5854.chr3.nnic	NA	183252710	183254728	Gene ID= novel_gene_chr3_5855 TPM= 1.93 Transcript Type= NA
chr3	183253795	183272426	183253795	183272426	+	ENST00000460419.1@B3GNT5	ENST00000460419.1	protein_coding	183253795,183269498	183254233,183272426	Gene ID= ENSG00000176597.11 TPM= 1.93 Transcript Type= protein_coding
chr3	183253244	183273391	183253244	183273391	+	ENST00000326505.3@B3GNT5	ENST00000326505.3	protein_coding	183253244,183269498	183253472,183273391	Gene ID= ENSG00000176597.11 TPM= 13.51 Transcript Type= protein_coding
chr3	183287805	183296615	183287805	183296615	+	transcript5856.chr3.nnic@B3GNT5	transcript5856.chr3.nnic	protein_coding	183287805,183296146,183296382	183287868,183296213,183296615	Gene ID= ENSG00000176597.11 TPM= 1.93 Transcript Type= NA
chr3	183253353	183296311	183253353	183296311	+	ENST00000480551.1@B3GNT5	ENST00000480551.1	protein_coding	183253353,183287605,183296146	183253472,183287868,183296311	Gene ID= ENSG00000176597.11 TPM= 6.76 Transcript Type= processed_transcript
chr3	183287480	183298504	183287480	183298504	+	ENST00000462559.1@B3GNT5	ENST00000462559.1	protein_coding	183287480,183296146	183287868,183298504	Gene ID= ENSG00000176597.11 TPM= 27.99 Transcript Type= processed_transcript
chr3	183447651	183456013	183447651	183456013	+	transcript5870.chr3.nnic@LINC00888	transcript5870.chr3.nnic	transcribed_unprocessed_pseudogene	183447651,183452078,183454012,183455199	183447947,183452351,183454093,183456013	Gene ID= ENSG00000240024.5 TPM= 2.9 Transcript Type= NA
chr3	183635623	183684477	183635623	183684477	+	ENST00000454652.6@KLHL24	ENST00000454652.6	protein_coding	183635623,183636221,183643480,183650296,183663458,183664921,183671034,183672296,183679086	183635793,183636311,183643542,183651276,183663642,183665039,183671222,183672484,183684477	Gene ID= ENSG00000114796.15 TPM= 6.76 Transcript Type= protein_coding
chr3	183635568	183679478	183635568	183679478	+	ENST00000242810.10@KLHL24	ENST00000242810.10	protein_coding	183635568,183643480,183650296,183663458,183664921,183671034,183672296,183679086	183635793,183643542,183651276,183663642,183665039,183671222,183672484,183679478	Gene ID= ENSG00000114796.15 TPM= 7.72 Transcript Type= protein_coding
chr3	183635623	183680312	183635623	183680312	+	transcript5897.chr3.nic@KLHL24	transcript5897.chr3.nic	protein_coding	183635623,183643480,183650296,183663458,183664921,183671034,183672296,183679086	183635747,183643542,183651276,183663642,183665039,183671222,183672484,183680312	Gene ID= ENSG00000114796.15 TPM= 2.25 Transcript Type= NA
chr3	183824335	183884895	183824335	183884895	-	transcript5921.chr3.nnic@AC131160.1	transcript5921.chr3.nnic	protein_coding	183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833724,183833492,183824335	183884895,183868060,183866765,183862801,183844326,183842447,183840640,183833825,183833589,183826732	Gene ID= ENSG00000283765.1 TPM= 7.72 Transcript Type= NA
chr3	183829385	183884907	183829385	183884907	-	ENST00000638817.1@PARL	ENST00000638817.1	protein_coding	183884722,183867865,183866625,183862753,183856432,183844231,183842298,183840570,183833724,183833492,183829385	183884907,183868060,183866765,183862801,183856551,183844326,183842447,183840640,183833825,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 1.28 Transcript Type= nonsense_mediated_decay
chr3	183829385	183884907	183829385	183884907	-	ENST00000317096.8@PARL	ENST00000317096.8	protein_coding	183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833724,183833492,183829385	183884907,183868060,183866765,183862801,183844326,183842447,183840640,183833825,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 53.41 Transcript Type= protein_coding
chr3	183829390	183884895	183829390	183884895	-	transcript5930.chr3.nic@PARL	transcript5930.chr3.nic	protein_coding	183884722,183867865,183866625,183862697,183844231,183842298,183840570,183833492,183829390	183884895,183868060,183866765,183862801,183844326,183842447,183840640,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 2.25 Transcript Type= NA
chr3	183829390	183884895	183829390	183884895	-	transcript5931.chr3.nic@PARL	transcript5931.chr3.nic	protein_coding	183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833492,183829390	183884895,183868060,183866765,183862801,183844326,183842447,183840640,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 2.25 Transcript Type= NA
chr3	183829390	183884888	183829390	183884888	-	ENST00000311101.9@PARL	ENST00000311101.9	protein_coding	183884722,183867865,183866625,183862753,183844231,183840570,183833724,183833492,183829390	183884888,183868060,183866765,183862801,183844326,183840640,183833825,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 6.11 Transcript Type= protein_coding
chr3	183829397	183884855	183829397	183884855	-	ENST00000435888.5@PARL	ENST00000435888.5	protein_coding	183884722,183867865,183866625,183862753,183844231,183840570,183833492,183829397	183884855,183868060,183866765,183862801,183844326,183840640,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 1.28 Transcript Type= protein_coding
chr3	183919934	184015703	183919934	184015703	-	transcript5934.chr3.nnic@ABCC5	transcript5934.chr3.nnic	protein_coding	184015559,184014264,183989226,183988572,183987770,183982774,183982451,183981727,183978503,183977517,183971563,183967695,183965377,183965185,183963385,183961511,183959733,183953086,183951857,183951441,183949972,183949753,183947324,183945850,183942727,183937901,183928747,183927330,183925555,183919934	184015703,184014447,183989383,183988727,183987917,183983007,183982624,183981874,183978651,183977624,183971919,183967766,183965501,183965257,183963588,183961654,183959835,183953270,183952003,183951570,183950125,183949881,183947510,183945939,183942916,183938060,183928825,183927443,183925719,183921401	Gene ID= ENSG00000114770.16 TPM= 6.27 Transcript Type= NA
chr3	183919934	184018015	183919934	184018015	-	ENST00000334444.10@ABCC5	ENST00000334444.10	protein_coding	184017830,184014264,183989226,183988572,183987770,183982774,183982451,183981727,183978503,183977517,183971563,183967695,183965377,183965185,183963385,183961511,183959733,183953086,183951857,183951441,183949972,183949753,183947324,183945850,183942727,183937901,183928747,183927330,183925555,183919934	184018015,184014447,183989383,183988727,183987917,183983007,183982624,183981874,183978651,183977624,183971919,183967766,183965501,183965257,183963588,183961654,183959835,183953270,183952003,183951570,183950125,183949881,183947510,183945939,183942916,183938060,183928825,183927443,183925719,183921401	Gene ID= ENSG00000114770.16 TPM= 9.17 Transcript Type= protein_coding
chr3	183983753	184015703	183983753	184015703	-	transcript5939.chr3.nnic@ABCC5	transcript5939.chr3.nnic	protein_coding	184015559,184014264,183989226,183988572,183987770,183985304,183983753	184015703,184014447,183989383,183988727,183987917,183985455,183984894	Gene ID= ENSG00000114770.16 TPM= 4.1 Transcript Type= NA
chr3	183983753	184017925	183983753	184017925	-	transcript5945.chr3.nic@ABCC5	transcript5945.chr3.nic	protein_coding	184017830,184014264,183989226,183988572,183985304,183983753	184017925,184014447,183989383,183988727,183987917,183984894	Gene ID= ENSG00000114770.16 TPM= 3.86 Transcript Type= NA
chr3	183983753	184015703	183983753	184015703	-	transcript5950.chr3.nnic@ABCC5	transcript5950.chr3.nnic	protein_coding	184015559,184014264,183989226,183988572,183983753	184015703,184014447,183989383,183988727,183987917	Gene ID= ENSG00000114770.16 TPM= 2.9 Transcript Type= NA
chr3	183983753	184017889	183983753	184017889	-	ENST00000443376.5@ABCC5	ENST00000443376.5	protein_coding	184017830,184014264,183989226,183988572,183987770,183985304,183983753	184017889,184014447,183989383,183988727,183987917,183985455,183984894	Gene ID= ENSG00000114770.16 TPM= 12.79 Transcript Type= nonsense_mediated_decay
chr3	183983753	184017863	183983753	184017863	-	ENST00000427120.6@ABCC5	ENST00000427120.6	protein_coding	184017830,184014264,183989226,183988572,183983753	184017863,184014447,183989383,183988727,183987917	Gene ID= ENSG00000114770.16 TPM= 23.17 Transcript Type= protein_coding
chr3	183983753	184017889	183983753	184017889	-	ENST00000382494.6@ABCC5	ENST00000382494.6	protein_coding	184017830,184014264,183989226,183988572,183987770,183985304,183983753	184017889,184014447,183989383,183988727,183987917,183985378,183984894	Gene ID= ENSG00000114770.16 TPM= 12.79 Transcript Type= protein_coding
chr3	183983753	184017889	183983753	184017889	-	ENST00000392579.6@ABCC5	ENST00000392579.6	protein_coding	184017830,184014264,183989226,183988572,183987770,183983753	184017889,184014447,183989383,183988727,183987917,183984894	Gene ID= ENSG00000114770.16 TPM= 2.17 Transcript Type= protein_coding
chr3	184135264	184145310	184135264	184145310	+	ENST00000273783.7@EIF2B5	ENST00000273783.7	protein_coding	184135264,184136612,184137620,184137898,184138166,184140080,184140418,184141925,184142237,184142502,184142779,184143052,184143442,184144099,184144597,184144884	184135580,184136736,184137805,184138075,184138246,184140157,184140730,184142070,184142378,184142603,184142886,184143142,184143565,184144224,184144707,184145310	Gene ID= ENSG00000145191.12 TPM= 131.28 Transcript Type= protein_coding
chr3	184155310	184173605	184155310	184173605	+	transcript5964.chr3.nnic@DVL3	transcript5964.chr3.nnic	protein_coding	184155310,184163657,184164267,184164492,184164796,184165113,184165422,184166126,184166446,184166606,184166826,184167580,184167898,184170006,184170319,184171567	184155796,184163726,184164388,184164601,184164931,184165206,184165491,184166265,184166522,184166673,184166975,184167711,184168065,184170221,184170729,184173605	Gene ID= ENSG00000161202.17 TPM= 8.21 Transcript Type= NA
chr3	184155388	184173610	184155388	184173610	+	ENST00000313143.7@DVL3	ENST00000313143.7	protein_coding	184155388,184163657,184164267,184164492,184164796,184165113,184165422,184166126,184166446,184166606,184166826,184167580,184167898,184170006,184170319	184155796,184163726,184164388,184164601,184164931,184165206,184165491,184166265,184166522,184166673,184166975,184167711,184168065,184170221,184173610	Gene ID= ENSG00000161202.17 TPM= 13.03 Transcript Type= protein_coding
chr3	184174689	184184091	184174689	184184091	+	ENST00000382456.7@AP2M1	ENST00000382456.7	protein_coding	184174689,184176951,184178857,184180169,184180849,184181085,184181696,184181912,184182151,184182757,184183482	184174959,184177067,184179122,184180251,184180984,184181226,184181815,184182047,184182248,184182868,184184091	Gene ID= ENSG00000161203.13 TPM= 291.77 Transcript Type= protein_coding
chr3	184174820	184184091	184174820	184184091	+	transcript5991.chr3.nic@AP2M1	transcript5991.chr3.nic	protein_coding	184174820,184176951,184178857,184180169,184180849,184181085,184181696,184181912,184182151,184182757	184174959,184177067,184179122,184180251,184180984,184181226,184181815,184182047,184182248,184184091	Gene ID= ENSG00000161203.13 TPM= 13.27 Transcript Type= NA
chr3	184186023	184194007	184186023	184194007	+	ENST00000429586.6@ABCF3	ENST00000429586.6	protein_coding	184186023,184186507,184186796,184187397,184187664,184187861,184188141,184188761,184188929,184189088,184189255,184189388,184189557,184189855,184190999,184191123,184192601,184192805,184193102,184193365,184193540	184186280,184186654,184186875,184187443,184187761,184187983,184188407,184188841,184188988,184189144,184189277,184189443,184189757,184189931,184191043,184191255,184192689,184192896,184193234,184193452,184194007	Gene ID= ENSG00000161204.11 TPM= 141.5 Transcript Type= protein_coding
chr3	184195146	184198290	184195146	184198290	-	transcript6025.chr3.nnic@NA	transcript6025.chr3.nnic	NA	184195146	184198290	Gene ID= novel_gene_chr3_6026 TPM= 2.9 Transcript Type= NA
chr3	184198644	184199404	184198644	184199404	+	transcript6023.chr3.nnic@NA	transcript6023.chr3.nnic	NA	184198644	184199404	Gene ID= novel_gene_chr3_6024 TPM= 1.93 Transcript Type= NA
chr3	184242425	184248963	184242425	184248963	-	transcript6031.chr3.nic@ALG3	transcript6031.chr3.nic	protein_coding	184248782,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242425	184248963,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676	Gene ID= ENSG00000214160.9 TPM= 9.65 Transcript Type= NA
chr3	184242425	184249548	184242425	184249548	-	ENST00000445626.6@ALG3	ENST00000445626.6	protein_coding	184249226,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242425	184249548,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676	Gene ID= ENSG00000214160.9 TPM= 1.93 Transcript Type= protein_coding
chr3	184242425	184249552	184242425	184249552	-	transcript6034.chr3.nnic@ALG3	transcript6034.chr3.nnic	protein_coding	184249459,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242425	184249552,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676	Gene ID= ENSG00000214160.9 TPM= 1.93 Transcript Type= NA
chr3	184242334	184248971	184242334	184248971	-	ENST00000397676.7@ALG3	ENST00000397676.7	protein_coding	184248745,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242334	184248971,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676	Gene ID= ENSG00000214160.9 TPM= 2.9 Transcript Type= protein_coding
chr3	184298709	184309054	184298709	184309054	+	ENST00000310118.8@PSMD2	ENST00000310118.8	protein_coding	184298709,184299851,184300280,184301537,184301847,184302370,184302679,184303002,184303320,184303643,184303947,184304304,184305768,184306054,184306350,184306751,184307357,184307614,184307890,184308449,184308708	184299401,184299907,184300444,184301658,184302071,184302528,184302823,184303062,184303466,184303749,184304074,184304391,184305930,184306155,184306495,184306834,184307525,184307708,184308016,184308567,184309054	Gene ID= ENSG00000175166.16 TPM= 910.76 Transcript Type= protein_coding
chr3	184314495	184335353	184314495	184335353	+	ENST00000346169.6@EIF4G1	ENST00000346169.6	protein_coding	184314495,184315489,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335353	Gene ID= ENSG00000114867.20 TPM= 169.17 Transcript Type= protein_coding
chr3	184314495	184335357	184314495	184335357	+	ENST00000352767.7@EIF4G1	ENST00000352767.7	protein_coding	184314495,184315763,184316132,184316713,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184315856,184316218,184316733,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335357	Gene ID= ENSG00000114867.20 TPM= 92.59 Transcript Type= protein_coding
chr3	184314542	184335351	184314542	184335351	+	ENST00000392537.6@EIF4G1	ENST00000392537.6	protein_coding	184314542,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335351	Gene ID= ENSG00000114867.20 TPM= 136.45 Transcript Type= protein_coding
chr3	184314547	184325299	184314547	184325299	+	transcript6105.chr3.nic@EIF4G1	transcript6105.chr3.nic	protein_coding	184314547,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269	184314674,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325299	Gene ID= ENSG00000114867.20 TPM= 29.57 Transcript Type= NA
chr3	184324912	184335351	184324912	184335351	+	transcript6106.chr3.nnic@EIF4G1	transcript6106.chr3.nnic	protein_coding	184324912,184325058,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184324919,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335351	Gene ID= ENSG00000114867.20 TPM= 57.32 Transcript Type= NA
chr3	184315164	184334908	184315164	184334908	+	ENST00000427845.5@EIF4G1	ENST00000427845.5	protein_coding	184315164,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323405,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184315545,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184334908	Gene ID= ENSG00000114867.20 TPM= 6.15 Transcript Type= protein_coding
chr3	184314567	184335017	184314567	184335017	+	ENST00000382330.7@EIF4G1	ENST00000382330.7	protein_coding	184314567,184315489,184315763,184316132,184316713,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184315545,184315856,184316218,184316733,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335017	Gene ID= ENSG00000114867.20 TPM= 20.13 Transcript Type= protein_coding
chr3	184315166	184335358	184315166	184335358	+	ENST00000342981.8@EIF4G1	ENST00000342981.8	protein_coding	184315166,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323405,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335358	Gene ID= ENSG00000114867.20 TPM= 88.97 Transcript Type= protein_coding
chr3	184335913	184345567	184335913	184345567	+	transcript6125.chr3.nic@FAM131A	transcript6125.chr3.nic	protein_coding	184335913,184337311,184338387,184341724,184342066,184342744,184344495	184336123,184337718,184338529,184341817,184342248,184342860,184345567	Gene ID= ENSG00000175182.14 TPM= 6.76 Transcript Type= NA
chr3	184361710	184368550	184361710	184368550	+	transcript6130.chr3.nnic@POLR2H	transcript6130.chr3.nnic	protein_coding	184361710,184363226,184364966,184365133,184366717,184368177	184362146,184363565,184365049,184365226,184366800,184368550	Gene ID= ENSG00000163882.9 TPM= 3.14 Transcript Type= NA
chr3	184361661	184368593	184361661	184368593	+	transcript6131.chr3.nic@POLR2H	transcript6131.chr3.nic	protein_coding	184361661,184362873,184364966,184365133,184368177	184362146,184363565,184365049,184365226,184368593	Gene ID= ENSG00000163882.9 TPM= 4.1 Transcript Type= NA
chr3	184363482	184368550	184363482	184368550	+	transcript6133.chr3.nnic@POLR2H	transcript6133.chr3.nnic	protein_coding	184363482,184364439,184365133,184366717,184368177	184363841,184365049,184365226,184366800,184368550	Gene ID= ENSG00000163882.9 TPM= 2.17 Transcript Type= NA
chr3	184361718	184368594	184361718	184368594	+	ENST00000456318.5@POLR2H	ENST00000456318.5	protein_coding	184361718,184362873,184364966,184365133,184366717,184368177	184362146,184363565,184365049,184365226,184366800,184368594	Gene ID= ENSG00000163882.9 TPM= 13.76 Transcript Type= protein_coding
chr3	184363403	184368533	184363403	184368533	+	ENST00000452961.5@POLR2H	ENST00000452961.5	protein_coding	184363403,184364966,184365133,184366717,184368177	184363574,184365049,184365226,184366800,184368533	Gene ID= ENSG00000163882.9 TPM= 4.83 Transcript Type= protein_coding
chr3	184380073	184389829	184380073	184389829	+	ENST00000204604.5@CHRD	ENST00000204604.5	protein_coding	184380073,184380692,184381235,184381496,184381716,184381933,184382389,184382634,184382856,184383016,184383312,184383523,184384537,184385018,184386046,184386492,184386845,184387051,184387374,184387931,184388587,184388893,184389367	184380466,184380795,184381364,184381624,184381815,184382020,184382530,184382774,184382938,184383163,184383418,184383642,184384693,184385238,184386159,184386755,184386938,184387107,184387477,184388033,184388741,184388995,184389829	Gene ID= ENSG00000090539.15 TPM= 8.21 Transcript Type= protein_coding
chr3	184380129	184389829	184380129	184389829	+	transcript6138.chr3.nnic@CHRD	transcript6138.chr3.nnic	protein_coding	184380129,184380692,184381235,184381496,184381716,184381933,184382389,184382634,184382856,184383016,184383312,184383523,184384537,184385018,184386046,184386845,184387051,184387374,184387931,184388587,184388893,184389367	184380466,184380795,184381364,184381624,184381815,184382020,184382530,184382774,184382938,184383163,184383418,184383642,184384693,184385238,184386159,184386938,184387107,184387477,184388033,184388741,184388995,184389829	Gene ID= ENSG00000090539.15 TPM= 4.34 Transcript Type= NA
chr3	184710367	184712002	184710367	184712002	-	ENST00000317897.4@MAGEF1	ENST00000317897.4	protein_coding	184710367	184712002	Gene ID= ENSG00000177383.4 TPM= 36.68 Transcript Type= protein_coding
chr3	184812147	185052604	184812147	185052604	+	transcript6148.chr3.nic@VPS8	transcript6148.chr3.nic	protein_coding	184812147,184824545,184826163,184832689,184834649,184838714,184839698,184849071,184849936,184852500,184853857,184854114,184855711,184859985,184862897,184866876,184868024,184868946,184869482,184870716,184886110,184894703,184898565,184900921,184913519,184914981,184915355,184920127,184922429,184924862,184926594,184928451,184929580,184930470,184936246,184940197,184957374,184964468,184966671,184971649,184982566,184983012,184993983,184996332,184999696,185024336,185048479,185051876	184812225,184824785,184826231,184832819,184834742,184838746,184839752,184849195,184850022,184852567,184854010,184854173,184855818,184860065,184863067,184866950,184868059,184869036,184869528,184870805,184886156,184894925,184898654,184900972,184913561,184915053,184915474,184920198,184922483,184924981,184926650,184928533,184929664,184930568,184936335,184940243,184957521,184964557,184966713,184971752,184982647,184983094,184994063,184996501,184999861,185024389,185048559,185052604	Gene ID= ENSG00000156931.15 TPM= 3.86 Transcript Type= NA
chr3	184812196	184816230	184812196	184816230	+	ENST00000485024.1@VPS8	ENST00000485024.1	protein_coding	184812196,184815784	184812225,184816230	Gene ID= ENSG00000156931.15 TPM= 7.72 Transcript Type= processed_transcript
chr3	184812171	185052612	184812171	185052612	+	ENST00000436792.6@VPS8	ENST00000436792.6	protein_coding	184812171,184824545,184826163,184832689,184834649,184838714,184839698,184849071,184849936,184852500,184853857,184854114,184855711,184859985,184862897,184866876,184868024,184868946,184869482,184870716,184886110,184894703,184898565,184900921,184913519,184914981,184915355,184920127,184924862,184926594,184928451,184929580,184930470,184936246,184940197,184957374,184964468,184966671,184971649,184982566,184983012,184993983,184996332,184999696,185024336,185048479,185051876	184812225,184824785,184826231,184832819,184834742,184838746,184839752,184849195,184850022,184852567,184854010,184854173,184855818,184860065,184863067,184866950,184868059,184869036,184869528,184870805,184886156,184894925,184898654,184900972,184913561,184915053,184915474,184920198,184924981,184926650,184928533,184929664,184930568,184936335,184940243,184957521,184964557,184966713,184971752,184982647,184983094,184994063,184996501,184999861,185024389,185048559,185052612	Gene ID= ENSG00000156931.15 TPM= 15.44 Transcript Type= protein_coding
chr3	185282941	185293079	185282941	185293079	+	ENST00000448876.5@MAP3K13	ENST00000448876.5	protein_coding	185282941,185285517,185291613	185283027,185285643,185293079	Gene ID= ENSG00000073803.13 TPM= 1.93 Transcript Type= protein_coding
chr3	185489601	185499057	185489601	185499057	-	ENST00000421852.5@TMEM41A	ENST00000421852.5	protein_coding	185498843,185496828,185495154,185494623,185489601	185499057,185496981,185495315,185494761,185491757	Gene ID= ENSG00000163900.10 TPM= 2.41 Transcript Type= protein_coding
chr3	185489601	185499036	185489601	185499036	-	transcript6168.chr3.nnic@TMEM41A	transcript6168.chr3.nnic	protein_coding	185498843,185496828,185494623,185489601	185499036,185496981,185494761,185491757	Gene ID= ENSG00000163900.10 TPM= 3.38 Transcript Type= NA
chr3	185586308	185631101	185586308	185631101	+	transcript6175.chr3.nnic@SENP2	transcript6175.chr3.nnic	protein_coding	185586308,185586393,185590114,185598412,185598958,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782	185586334,185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185631101	Gene ID= ENSG00000163904.12 TPM= 4.83 Transcript Type= NA
chr3	185586174	185633551	185586174	185633551	+	ENST00000296257.9@SENP2	ENST00000296257.9	protein_coding	185586174,185590114,185598412,185598958,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782	185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185633551	Gene ID= ENSG00000163904.12 TPM= 1.93 Transcript Type= protein_coding
chr3	185915906	185938136	185915906	185938136	-	ENST00000453386.6@TRA2B	ENST00000453386.6	protein_coding	185937825,185926601,185925464,185923796,185922011,185921104,185919437,185918365,185915906	185938136,185926734,185925626,185923984,185922126,185921187,185919496,185918438,185917725	Gene ID= ENSG00000136527.17 TPM= 12.55 Transcript Type= protein_coding
chr3	185917330	185938029	185917330	185938029	-	ENST00000456380.5@TRA2B	ENST00000456380.5	protein_coding	185937825,185931577,185926601,185925464,185923796,185922011,185921104,185919437,185918365,185917330	185938029,185931852,185926734,185925626,185923984,185922126,185921187,185919496,185918438,185917725	Gene ID= ENSG00000136527.17 TPM= 12.55 Transcript Type= nonsense_mediated_decay
chr3	185931754	185938013	185931754	185938013	-	ENST00000342294.4@TRA2B	ENST00000342294.4	protein_coding	185937825,185931754	185938013,185931852	Gene ID= ENSG00000136527.17 TPM= 18.34 Transcript Type= protein_coding
chr3	185931639	185937987	185931639	185937987	-	transcript6199.chr3.nnic@NA	transcript6199.chr3.nnic	NA	185931639	185937987	Gene ID= novel_gene_chr3_6200 TPM= 5.79 Transcript Type= NA
chr3	186046308	186109112	186046308	186109112	-	ENST00000306376.9@ETV5	ENST00000306376.9	protein_coding	186108940,186105824,186105625,186105449,186105305,186081046,186079817,186065813,186064417,186057423,186057075,186052030,186046308	186109112,186105942,186105712,186105496,186105355,186081175,186080104,186066072,186064476,186057491,186057244,186052131,186048860	Gene ID= ENSG00000244405.7 TPM= 24.13 Transcript Type= protein_coding
chr3	186546339	186567352	186546339	186567352	-	ENST00000338733.9@TBCCD1	ENST00000338733.9	protein_coding	186567267,186563994,186558417,186556409,186554898,186554254,186551129,186546339	186567352,186564372,186558572,186556775,186555084,186554751,186551279,186546955	Gene ID= ENSG00000113838.12 TPM= 10.62 Transcript Type= protein_coding
chr3	186567403	186585800	186567403	186585800	+	ENST00000439351.5@DNAJB11	ENST00000439351.5	protein_coding	186567403,186570163,186572095,186575840,186577668,186581371,186581995,186582716,186583865,186584430,186585344	186567596,186570965,186572251,186575937,186577800,186581513,186582077,186582773,186583976,186584589,186585800	Gene ID= ENSG00000090520.11 TPM= 16.41 Transcript Type= protein_coding
chr3	186570678	186585799	186570678	186585799	+	ENST00000265028.7@DNAJB11	ENST00000265028.7	protein_coding	186570678,186572095,186575840,186577668,186581371,186581995,186582716,186583865,186584430,186585344	186570965,186572251,186575937,186577800,186581513,186582077,186582773,186583976,186584589,186585799	Gene ID= ENSG00000090520.11 TPM= 23.17 Transcript Type= protein_coding
chr3	186783577	186789897	186783577	186789897	+	ENST00000440191.6@EIF4A2	ENST00000440191.6	protein_coding	186783577,186784429,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803,186789125	186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186787882,186789897	Gene ID= ENSG00000156976.16 TPM= 222.67 Transcript Type= protein_coding
chr3	186783577	186789881	186783577	186789881	+	ENST00000425053.5@EIF4A2	ENST00000425053.5	protein_coding	186783577,186784432,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803,186788310,186789125	186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186787882,186788416,186789881	Gene ID= ENSG00000156976.16 TPM= 15.93 Transcript Type= nonsense_mediated_decay
chr3	186789900	186806501	186789900	186806501	-	ENST00000296273.6@RFC4	ENST00000296273.6	protein_coding	186806290,186804583,186801117,186797535,186794658,186792804,186792490,186791725,186790326,186790142,186789900	186806501,186804724,186801195,186797614,186794777,186792947,186792610,186791850,186790406,186790255,186790064	Gene ID= ENSG00000163918.10 TPM= 5.79 Transcript Type= protein_coding
chr3	186930485	187078553	186930485	187078553	+	ENST00000169298.7@ST6GAL1	ENST00000169298.7	protein_coding	186930485,186963785,187038742,187042654,187051249,187072849,187074159,187075562	186930834,186963926,187038873,187043310,187051346,187072947,187074333,187078553	Gene ID= ENSG00000073849.14 TPM= 6.76 Transcript Type= protein_coding
chr3	187721377	187745727	187721377	187745727	-	ENST00000406870.6@BCL6	ENST00000406870.6	protein_coding	187745410,187734869,187733533,187731709,187729050,187728360,187726731,187725499,187724941,187721377	187745727,187734907,187733703,187731930,187730021,187728544,187726898,187725629,187725078,187722601	Gene ID= ENSG00000113916.17 TPM= 185.34 Transcript Type= protein_coding
chr3	187738795	187741988	187738795	187741988	+	transcript6261.chr3.nnic@NA	transcript6261.chr3.nnic	NA	187738795	187741988	Gene ID= novel_gene_chr3_6262 TPM= 12.55 Transcript Type= NA
chr3	187743024	187745400	187743024	187745400	-	transcript6267.chr3.nnic@NA	transcript6267.chr3.nnic	NA	187743024	187745400	Gene ID= novel_gene_chr3_6268 TPM= 7.72 Transcript Type= NA
chr3	187745168	187745293	187745168	187745293	+	transcript6263.chr3.nnic@NA	transcript6263.chr3.nnic	NA	187745168	187745293	Gene ID= novel_gene_chr3_6264 TPM= 1.93 Transcript Type= NA
chr3	188407790	188409929	188407790	188409929	-	transcript6292.chr3.nnic@NA	transcript6292.chr3.nnic	NA	188407790	188409929	Gene ID= novel_gene_chr3_6293 TPM= 3.86 Transcript Type= NA
chr3	188760741	188763825	188760741	188763825	+	transcript6288.chr3.nnic@NA	transcript6288.chr3.nnic	NA	188760741	188763825	Gene ID= novel_gene_chr3_6289 TPM= 1.93 Transcript Type= NA
chr3	190862863	190863570	190862863	190863570	+	transcript6303.chr3.nnic@NA	transcript6303.chr3.nnic	NA	190862863	190863570	Gene ID= novel_gene_chr3_6304 TPM= 1.93 Transcript Type= NA
chr3	191329085	191392175	191329085	191392175	+	ENST00000392456.3@CCDC50	ENST00000392456.3	protein_coding	191329085,191357088,191357998,191361069,191369919,191375062,191380159,191380687,191380828,191382746,191389496,191391741	191329723,191357150,191358124,191361159,191370036,191375589,191380274,191380731,191380932,191382825,191389602,191392175	Gene ID= ENSG00000152492.13 TPM= 2.41 Transcript Type= protein_coding
chr3	191329077	191398670	191329077	191398670	+	ENST00000392455.7@CCDC50	ENST00000392455.7	protein_coding	191329077,191357088,191357998,191361069,191369919,191380159,191380687,191380828,191382746,191389496,191391741	191329723,191357150,191358124,191361159,191370036,191380274,191380731,191380932,191382825,191389602,191398670	Gene ID= ENSG00000152492.13 TPM= 26.55 Transcript Type= protein_coding
chr3	193240619	193270855	193240619	193270855	+	transcript6319.chr3.nnic@HRASLS	transcript6319.chr3.nnic	protein_coding	193240619,193251367,193255651,193262970,193270604	193240821,193251500,193255789,193263235,193270855	Gene ID= ENSG00000127252.5 TPM= 3.86 Transcript Type= NA
chr3	193241254	193270855	193241254	193270855	+	transcript6322.chr3.nnic@HRASLS	transcript6322.chr3.nnic	protein_coding	193241254,193251367,193255651,193262970,193270604	193241533,193251500,193255789,193263235,193270855	Gene ID= ENSG00000127252.5 TPM= 3.86 Transcript Type= NA
chr3	193241125	193270855	193241125	193270855	+	ENST00000264735.2@HRASLS	ENST00000264735.2	protein_coding	193241125,193255651,193262970,193270604	193241533,193255789,193263235,193270855	Gene ID= ENSG00000127252.5 TPM= 34.75 Transcript Type= protein_coding
chr3	193241193	193315847	193241193	193315847	+	transcript6326.chr3.nnic@HRASLS	transcript6326.chr3.nnic	protein_coding	193241193,193255651,193262970,193314044	193241533,193255789,193263235,193315847	Gene ID= ENSG00000127252.5 TPM= 1.93 Transcript Type= NA
chr3	193241246	193315417	193241246	193315417	+	transcript6330.chr3.nnic@HRASLS	transcript6330.chr3.nnic	protein_coding	193241246,193255651,193314044	193241533,193255789,193315417	Gene ID= ENSG00000127252.5 TPM= 1.93 Transcript Type= NA
chr3	194136145	194138732	194136145	194138732	+	ENST00000232424.3@HES1	ENST00000232424.3	protein_coding	194136145,194136617,194136961,194137683	194136488,194136712,194137048,194138732	Gene ID= ENSG00000114315.3 TPM= 3.86 Transcript Type= protein_coding
chr3	194584011	194590260	194584011	194590260	+	ENST00000453671.5@TMEM44-AS1	ENST00000453671.5	antisense_RNA	194584011,194589021,194589474,194589855	194584448,194589142,194589626,194590260	Gene ID= ENSG00000231770.5 TPM= 2.9 Transcript Type= antisense_RNA
chr3	194584017	194584906	194584017	194584906	+	transcript6383.chr3.nnic@NA	transcript6383.chr3.nnic	NA	194584017	194584906	Gene ID= novel_gene_chr3_6384 TPM= 1.93 Transcript Type= NA
chr3	194622548	194633447	194622548	194633447	-	transcript6379.chr3.nic@TMEM44	transcript6379.chr3.nic	protein_coding	194633079,194628383,194625897,194623529,194622548	194633447,194628509,194625990,194623695,194623310	Gene ID= ENSG00000145014.17 TPM= 1.93 Transcript Type= NA
chr3	194587681	194633325	194587681	194633325	-	ENST00000347147.8@TMEM44	ENST00000347147.8	protein_coding	194633079,194628383,194625897,194623529,194623224,194617099,194615569,194610916,194604287,194587681	194633325,194628509,194625990,194623695,194623310,194617269,194615697,194611020,194604445,194588639	Gene ID= ENSG00000145014.17 TPM= 1.93 Transcript Type= protein_coding
chr3	194640788	194672477	194640788	194672477	-	ENST00000265245.9@LSG1	ENST00000265245.9	protein_coding	194672064,194670009,194666452,194666203,194665557,194660073,194658957,194652729,194651115,194650881,194648681,194646164,194644573,194640788	194672477,194670135,194666572,194666289,194665643,194660133,194659133,194653142,194651216,194651024,194648804,194646243,194644746,194642247	Gene ID= ENSG00000041802.10 TPM= 29.92 Transcript Type= protein_coding
chr3	194685878	194688541	194685878	194688541	+	transcript6397.chr3.nnic@NA	transcript6397.chr3.nnic	NA	194685878	194688541	Gene ID= novel_gene_chr3_6398 TPM= 10.62 Transcript Type= NA
chr3	195278793	195443010	195278793	195443010	-	transcript6406.chr3.nic@ACAP2	transcript6406.chr3.nic	protein_coding	195442795,195381903,195381009,195345259,195342471,195336932,195333028,195326885,195320701,195312947,195308786,195307223,195306511,195301966,195301575,195297190,195295708,195294719,195292265,195291706,195289121,195285796,195278793	195443010,195382022,195381062,195345317,195342654,195336976,195333123,195326959,195320813,195312967,195308837,195307323,195306616,195302174,195301644,195297281,195295892,195294811,195292452,195291815,195289231,195285857,195279428	Gene ID= ENSG00000114331.13 TPM= 1.93 Transcript Type= NA
chr3	195342606	195443041	195342606	195443041	-	transcript6408.chr3.nic@ACAP2	transcript6408.chr3.nic	protein_coding	195442795,195392090,195381903,195381009,195345259,195342606	195443041,195392147,195382022,195381062,195345317,195342654	Gene ID= ENSG00000114331.13 TPM= 2.9 Transcript Type= NA
chr3	195514428	195543393	195514428	195543393	-	transcript6412.chr3.nnic@PPP1R2	transcript6412.chr3.nnic	protein_coding	195542904,195529794,195524819,195523692,195519018,195516842,195514428	195543393,195529901,195524896,195523786,195519185,195516942,195515363	Gene ID= ENSG00000184203.7 TPM= 15.44 Transcript Type= NA
chr3	195514425	195543386	195514425	195543386	-	ENST00000618156.4@PPP1R2	ENST00000618156.4	protein_coding	195542904,195529794,195524819,195523692,195519018,195514425	195543386,195529901,195524896,195523786,195519185,195516942	Gene ID= ENSG00000184203.7 TPM= 303.11 Transcript Type= protein_coding
chr3	195568702	195584205	195568702	195584205	-	ENST00000343267.7@APOD	ENST00000343267.7	protein_coding	195583878,195579339,195573850,195571277,195568702	195584205,195579495,195573971,195571365,195569135	Gene ID= ENSG00000189058.8 TPM= 405.43 Transcript Type= protein_coding
chr3	195568753	195583954	195568753	195583954	-	ENST00000458447.5@APOD	ENST00000458447.5	protein_coding	195583878,195579339,195577062,195573850,195571277,195568753	195583954,195579495,195577183,195573971,195571365,195569135	Gene ID= ENSG00000189058.8 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr3	195686271	195687322	195686271	195687322	-	transcript6454.chr3.nnic@NA	transcript6454.chr3.nnic	NA	195687184,195686271	195687322,195686807	Gene ID= novel_gene_chr3_6455 TPM= 4.83 Transcript Type= NA
chr3	195686271	195688149	195686271	195688149	-	transcript6452.chr3.nnic@NA	transcript6452.chr3.nnic	NA	195687582,195687018,195686271	195688149,195687278,195686793	Gene ID= novel_gene_chr3_6453 TPM= 3.86 Transcript Type= NA
chr3	195863365	195869690	195863365	195869690	-	ENST00000420716.2@TNK2	ENST00000420716.2	protein_coding	195867361,195867169,195866889,195863365	195869690,195867264,195867016,195864187	Gene ID= ENSG00000061938.17 TPM= 96.53 Transcript Type= retained_intron
chr3	195899335	195901553	195899335	195901553	-	transcript6477.chr3.nnic@NA	transcript6477.chr3.nnic	NA	195899335	195901553	Gene ID= novel_gene_chr3_6478 TPM= 1.93 Transcript Type= NA
chr3	195908074	195913265	195908074	195913265	+	transcript6467.chr3.nnic@TNK2-AS1	transcript6467.chr3.nnic	antisense_RNA	195908074,195909865,195913109	195908778,195910541,195913265	Gene ID= ENSG00000224614.1 TPM= 9.97 Transcript Type= NA
chr3	195908074	195913262	195908074	195913262	+	transcript6468.chr3.nnic@TNK2-AS1	transcript6468.chr3.nnic	antisense_RNA	195908074,195909865,195913149	195908778,195910541,195913262	Gene ID= ENSG00000224614.1 TPM= 5.15 Transcript Type= NA
chr3	195908074	195913265	195908074	195913265	+	transcript6469.chr3.nnic@TNK2-AS1	transcript6469.chr3.nnic	antisense_RNA	195908074,195909865,195912856	195908778,195911118,195913265	Gene ID= ENSG00000224614.1 TPM= 1.93 Transcript Type= NA
chr3	195908076	195911257	195908076	195911257	+	ENST00000458180.1@TNK2-AS1	ENST00000458180.1	antisense_RNA	195908076,195909865	195908778,195911257	Gene ID= ENSG00000224614.1 TPM= 7.08 Transcript Type= antisense_RNA
chr3	195914335	195915628	195914335	195915628	-	transcript6479.chr3.nnic@NA	transcript6479.chr3.nnic	NA	195914335	195915628	Gene ID= novel_gene_chr3_6480 TPM= 1.93 Transcript Type= NA
chr3	195959748	195990322	195959748	195990322	-	transcript6482.chr3.nnic@SDHAP1	transcript6482.chr3.nnic	transcribed_unprocessed_pseudogene	195990190,195986519,195985627,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963300,195962516,195959748	195990322,195986604,195985789,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542,195963421,195962627,195960086	Gene ID= ENSG00000185485.14 TPM= 2.73 Transcript Type= NA
chr3	195959748	195990322	195959748	195990322	-	transcript6486.chr3.nic@SDHAP1	transcript6486.chr3.nic	transcribed_unprocessed_pseudogene	195990190,195986519,195985627,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963300,195959748	195990322,195986604,195985789,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542,195963421,195960086	Gene ID= ENSG00000185485.14 TPM= 10.45 Transcript Type= NA
chr3	195963104	195990322	195963104	195990322	-	transcript6488.chr3.nic@SDHAP1	transcript6488.chr3.nic	transcribed_unprocessed_pseudogene	195990190,195986519,195985627,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195968219,195967879,195967514,195965429,195963104	195990322,195986604,195985789,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195968385,195967990,195967644,195965542,195963421	Gene ID= ENSG00000185485.14 TPM= 2.25 Transcript Type= NA
chr3	195976481	195990322	195976481	195990322	-	transcript6498.chr3.nic@SDHAP1	transcript6498.chr3.nic	transcribed_unprocessed_pseudogene	195990190,195986519,195985627,195984112,195982162,195979744,195976481	195990322,195986604,195985789,195984276,195982310,195979866,195977251	Gene ID= ENSG00000185485.14 TPM= 1.93 Transcript Type= NA
chr3	195961441	195962969	195961441	195962969	+	transcript6500.chr3.nnic@NA	transcript6500.chr3.nnic	NA	195961441	195962969	Gene ID= novel_gene_chr3_6501 TPM= 4.83 Transcript Type= NA
chr3	196049284	196082189	196049284	196082189	-	ENST00000360110.8@TFRC	ENST00000360110.8	protein_coding	196082043,196077064,196075159,196073930,196072003,196071396,196069455,196068032,196067518,196065443,196064309,196062854,196062582,196060180,196058574,196058284,196055080,196053418,196049284	196082189,196077122,196075360,196074125,196072152,196071498,196069568,196068130,196067657,196065600,196064428,196062939,196062645,196060247,196058632,196058365,196055301,196053558,196052184	Gene ID= ENSG00000072274.12 TPM= 49.23 Transcript Type= protein_coding
chr3	196234368	196287748	196234368	196287748	-	transcript6511.chr3.nnic@PCYT1A	transcript6511.chr3.nnic	protein_coding	196287615,196270415,196257788,196248207,196247367,196242562,196241948,196239547,196237447,196234368	196287748,196270541,196257887,196248323,196247518,196242640,196242090,196239735,196238894,196234864	Gene ID= ENSG00000161217.11 TPM= 16.41 Transcript Type= NA
chr3	196234368	196287627	196234368	196287627	-	transcript6513.chr3.nic@PCYT1A	transcript6513.chr3.nic	protein_coding	196287532,196270415,196257788,196248207,196247367,196242562,196241948,196239547,196234368	196287627,196270541,196257887,196248323,196247518,196242640,196242090,196239735,196238894	Gene ID= ENSG00000161217.11 TPM= 2.9 Transcript Type= NA
chr3	196238551	196287845	196238551	196287845	-	ENST00000431016.5@PCYT1A	ENST00000431016.5	protein_coding	196287615,196270415,196257788,196248207,196247367,196242562,196241948,196239547,196238551	196287845,196270541,196257887,196248323,196247518,196242640,196242090,196239735,196238894	Gene ID= ENSG00000161217.11 TPM= 1.93 Transcript Type= protein_coding
chr3	196234368	196287713	196234368	196287713	-	ENST00000292823.6@PCYT1A	ENST00000292823.6	protein_coding	196287615,196283475,196270415,196257788,196248207,196247367,196242562,196241948,196239547,196234368	196287713,196283538,196270541,196257887,196248323,196247518,196242640,196242090,196239735,196238894	Gene ID= ENSG00000161217.11 TPM= 132.25 Transcript Type= protein_coding
chr3	196291219	196318288	196291219	196318288	-	ENST00000325318.9@TCTEX1D2	ENST00000325318.9	protein_coding	196318040,196316098,196306943,196296006,196291219	196318288,196316231,196307012,196296069,196291374	Gene ID= ENSG00000213123.10 TPM= 1.93 Transcript Type= protein_coding
chr3	196347662	196432474	196347662	196432474	-	ENST00000296328.8@UBXN7	ENST00000296328.8	protein_coding	196432327,196407246,196402952,196393554,196391813,196371896,196369421,196368028,196362294,196361844,196347662	196432474,196407393,196403019,196393619,196391925,196372042,196369511,196368155,196362687,196361923,196356846	Gene ID= ENSG00000163960.11 TPM= 2.9 Transcript Type= protein_coding
chr3	196484172	196503737	196484172	196503737	-	transcript6541.chr3.nic@RNF168	transcript6541.chr3.nic	protein_coding	196502873,196488607,196484172	196503737,196488683,196487578	Gene ID= ENSG00000163961.4 TPM= 1.93 Transcript Type= NA
chr3	196506877	196515366	196506877	196515366	-	ENST00000397537.2@SMCO1	ENST00000397537.2	protein_coding	196515160,196509520,196506877	196515366,196509669,196508331	Gene ID= ENSG00000214097.4 TPM= 13.51 Transcript Type= protein_coding
chr3	196506879	196515346	196506879	196515346	-	ENST00000452776.1@SMCO1	ENST00000452776.1	protein_coding	196515104,196509520,196506879	196515346,196509669,196508331	Gene ID= ENSG00000214097.4 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr3	196554177	196568639	196554177	196568639	-	ENST00000332629.6@WDR53	ENST00000332629.6	protein_coding	196568519,196566877,196560996,196554177	196568639,196567307,196561491,196554807	Gene ID= ENSG00000185798.7 TPM= 1.45 Transcript Type= protein_coding
chr3	196554177	196569055	196554177	196569055	-	transcript6550.chr3.nnic@WDR53	transcript6550.chr3.nnic	protein_coding	196568519,196560996,196554177	196569055,196561491,196554807	Gene ID= ENSG00000185798.7 TPM= 2.41 Transcript Type= NA
chr3	196712335	196734580	196712335	196734580	+	transcript6582.chr3.nic@PIGX	transcript6582.chr3.nic	protein_coding	196712335,196716858,196722415,196727923,196728702,196730992,196733759	196713124,196716921,196722556,196728136,196728755,196731092,196734580	Gene ID= ENSG00000163964.14 TPM= 1.93 Transcript Type= NA
chr3	196739826	196829347	196739826	196829347	+	transcript6566.chr3.nic@PAK2	transcript6566.chr3.nic	protein_coding	196739826,196782626,196801927,196803017,196805352,196806579,196807782,196810590,196812219,196812739,196814451,196818057,196820371,196828319	196740157,196782833,196802027,196803164,196805383,196806686,196807914,196810653,196812267,196812851,196814568,196818156,196820567,196829347	Gene ID= ENSG00000180370.10 TPM= 2.9 Transcript Type= NA
chr3	196739857	196832647	196739857	196832647	+	ENST00000327134.7@PAK2	ENST00000327134.7	protein_coding	196739857,196782626,196801927,196803017,196805352,196806579,196807782,196810590,196812219,196812739,196814451,196818057,196820371,196827196,196828319	196740157,196782833,196802027,196803164,196805383,196806686,196807914,196810653,196812267,196812851,196814568,196818156,196820567,196827333,196832647	Gene ID= ENSG00000180370.10 TPM= 15.44 Transcript Type= protein_coding
chr3	196867856	196934714	196867856	196934714	+	ENST00000323460.9@SENP5	ENST00000323460.9	protein_coding	196867856,196885151,196899666,196899924,196900365,196903533,196923414,196927796,196929633,196930813	196868073,196886694,196899771,196900062,196900412,196903610,196923551,196927879,196929683,196934714	Gene ID= ENSG00000119231.10 TPM= 50.2 Transcript Type= protein_coding
chr3	196935409	196942594	196935409	196942594	-	ENST00000428425.1@NCBP2	ENST00000428425.1	protein_coding	196942370,196939251,196937510,196935409	196942594,196939432,196937648,196937082	Gene ID= ENSG00000114503.10 TPM= 24.3 Transcript Type= nonsense_mediated_decay
chr3	196935407	196942597	196935407	196942597	-	ENST00000321256.9@NCBP2	ENST00000321256.9	protein_coding	196942426,196939251,196937510,196935407	196942597,196939432,196937648,196937082	Gene ID= ENSG00000114503.10 TPM= 47.46 Transcript Type= protein_coding
chr3	196935406	196942377	196935406	196942377	-	ENST00000447325.5@NCBP2	ENST00000447325.5	protein_coding	196942160,196939251,196937510,196935406	196942377,196939432,196937648,196937082	Gene ID= ENSG00000114503.10 TPM= 7.4 Transcript Type= protein_coding
chr3	196942623	196943540	196942623	196943540	+	ENST00000602845.1@NCBP2-AS2	ENST00000602845.1	protein_coding	196942623	196943540	Gene ID= ENSG00000270170.1 TPM= 134.18 Transcript Type= protein_coding
chr3	196946343	196968833	196946343	196968833	-	ENST00000412723.5@PIGZ	ENST00000412723.5	protein_coding	196968687,196951821,196946343	196968833,196952031,196948685	Gene ID= ENSG00000119227.7 TPM= 4.83 Transcript Type= protein_coding
chr3	197042931	197298130	197042931	197298130	-	transcript6634.chr3.nic@DLG1	transcript6634.chr3.nic	protein_coding	197297544,197297186,197296346,197282679,197194425,197161640,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042931	197298130,197297235,197296477,197282845,197194589,197161738,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 6.27 Transcript Type= NA
chr3	197042931	197298180	197042931	197298180	-	transcript6635.chr3.nic@DLG1	transcript6635.chr3.nic	protein_coding	197297673,197297186,197296346,197282679,197194425,197161640,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042931	197298180,197297235,197296477,197282845,197194589,197161738,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 8.21 Transcript Type= NA
chr3	197612641	197627894	197612641	197627894	-	transcript6660.chr3.nnic@AC132008.2	transcript6660.chr3.nnic	transcribed_unprocessed_pseudogene	197627780,197624112,197623220,197622187,197621704,197619766,197612641	197627894,197624197,197623382,197622330,197621868,197619888,197615624	Gene ID= ENSG00000214135.8 TPM= 1.93 Transcript Type= NA
chr3	197737111	197738455	197737111	197738455	+	transcript6668.chr3.nnic@NA	transcript6668.chr3.nnic	NA	197737111	197738455	Gene ID= novel_gene_chr3_6669 TPM= 1.93 Transcript Type= NA
chr3	197749750	197787596	197749750	197787596	+	ENST00000241502.8@FYTTD1	ENST00000241502.8	protein_coding	197749750,197756426,197768439,197770132,197773403,197774149,197776927,197778338,197781811	197750074,197756557,197768587,197770244,197773499,197774210,197777001,197778464,197787596	Gene ID= ENSG00000122068.12 TPM= 27.43 Transcript Type= protein_coding
chr3	197791254	197882543	197791254	197882543	+	transcript6712.chr3.nic@LRCH3	transcript6712.chr3.nic	protein_coding	197791254,197814908,197817176,197820325,197826878,197829564,197830770,197832197,197835674,197839321,197847409,197847872,197852561,197854392,197858834,197865423,197866112,197870160,197871325,197875698,197880512	197791540,197815052,197817302,197820430,197827014,197829673,197830863,197832317,197835822,197839397,197847460,197848021,197852620,197854445,197858905,197865471,197866219,197870278,197871462,197875775,197882543	Gene ID= ENSG00000186001.12 TPM= 7.72 Transcript Type= NA
chr3	197799033	197800037	197799033	197800037	+	transcript6719.chr3.nnic@NA	transcript6719.chr3.nnic	NA	197799033	197800037	Gene ID= novel_gene_chr3_6720 TPM= 1.93 Transcript Type= NA
chr3	197884464	197885830	197884464	197885830	+	transcript6721.chr3.nnic@NA	transcript6721.chr3.nnic	NA	197884464	197885830	Gene ID= novel_gene_chr3_6722 TPM= 4.83 Transcript Type= NA
chr3	197949987	197956610	197949987	197956610	+	ENST00000464167.5@RPL35A	ENST00000464167.5	protein_coding	197949987,197950936,197951159,197954003,197955750	197950221,197950978,197951311,197954147,197956610	Gene ID= ENSG00000182899.14 TPM= 248.57 Transcript Type= protein_coding
chr3	197950194	197955851	197950194	197955851	+	ENST00000448864.5@RPL35A	ENST00000448864.5	protein_coding	197950194,197950936,197951159,197954003,197955750	197950299,197950978,197951311,197954147,197955851	Gene ID= ENSG00000182899.14 TPM= 27.99 Transcript Type= protein_coding
chr3	197950206	197955817	197950206	197955817	+	ENST00000429437.5@RPL35A	ENST00000429437.5	protein_coding	197950206,197950936,197951159,197954003,197955750	197950221,197950978,197951328,197954147,197955817	Gene ID= ENSG00000182899.14 TPM= 266.91 Transcript Type= nonsense_mediated_decay
chr4	53285	55783	53285	55783	+	transcript5.chr4.nnic@NA	transcript5.chr4.nnic	NA	53285	55783	Gene ID= novel_gene_chr4_6 TPM= 4.83 Transcript Type= NA
chr4	53285	88211	53285	88211	+	ENST00000610261.5@ZNF595	ENST00000610261.5	protein_coding	53285,59430,60058,85731	53491,59556,60153,88211	Gene ID= ENSG00000272602.5 TPM= 3.86 Transcript Type= protein_coding
chr4	425424	474156	425424	474156	-	transcript13.chr4.nnic@ZNF721	transcript13.chr4.nnic	protein_coding	473981,472575,437446,435770,425424	474156,472701,437511,435879,426973	Gene ID= ENSG00000182903.15 TPM= 1.93 Transcript Type= NA
chr4	439993	474156	439993	474156	-	transcript16.chr4.nnic@ABCA11P	transcript16.chr4.nnic	transcribed_processed_pseudogene	473981,472575,467617,439993	474156,472701,467681,444432	Gene ID= ENSG00000251595.7 TPM= 1.93 Transcript Type= NA
chr4	497541	497746	497541	497746	+	transcript24.chr4.nnic@NA	transcript24.chr4.nnic	NA	497541	497746	Gene ID= novel_gene_chr4_25 TPM= 1.93 Transcript Type= NA
chr4	498266	498805	498266	498805	+	transcript26.chr4.nnic@NA	transcript26.chr4.nnic	NA	498266	498805	Gene ID= novel_gene_chr4_27 TPM= 3.86 Transcript Type= NA
chr4	499230	539529	499230	539529	+	ENST00000453061.6@PIGG	ENST00000453061.6	protein_coding	499230,500396,505718,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153	499489,500601,505927,507593,508970,516185,521273,521941,523913,527230,530745,533981,539529	Gene ID= ENSG00000174227.15 TPM= 4.83 Transcript Type= protein_coding
chr4	672436	674338	672436	674338	-	ENST00000304312.4@ATP5I	ENST00000304312.4	protein_coding	674212,673912,673303,672436	674338,673966,673401,672519	Gene ID= ENSG00000169020.9 TPM= 412.19 Transcript Type= protein_coding
chr4	672438	674330	672438	674330	-	ENST00000505852.1@ATP5I	ENST00000505852.1	protein_coding	674212,673303,672438	674330,673401,672519	Gene ID= ENSG00000169020.9 TPM= 24.13 Transcript Type= processed_transcript
chr4	681829	689441	681829	689441	-	ENST00000322224.8@MFSD7	ENST00000322224.8	protein_coding	688993,686532,686089,685835,684719,684483,683609,683210,682781,681829	689441,686690,686302,685911,684856,684599,683761,683367,682890,682376	Gene ID= ENSG00000169026.12 TPM= 2.9 Transcript Type= protein_coding
chr4	681858	689191	681858	689191	-	ENST00000515118.5@MFSD7	ENST00000515118.5	protein_coding	688993,686532,684719,684483,683609,683210,682781,681858	689191,686690,684856,684602,683761,683367,682890,682376	Gene ID= ENSG00000169026.12 TPM= 1.93 Transcript Type= protein_coding
chr4	705784	766608	705784	766608	+	ENST00000470161.6@PCGF3	ENST00000470161.6	protein_coding	705784,730630,730952,733672,734931,737466,743474,744600,761279,764984,766032	705970,730668,731110,733789,735027,737521,743584,744688,761416,765064,766608	Gene ID= ENSG00000185619.18 TPM= 1.93 Transcript Type= protein_coding
chr4	705784	734479	705784	734479	+	ENST00000400151.6@PCGF3	ENST00000400151.6	protein_coding	705784,730630,730970,733672	705970,730668,731110,734479	Gene ID= ENSG00000185619.18 TPM= 1.93 Transcript Type= protein_coding
chr4	766108	770087	766108	770087	+	transcript63.chr4.nnic@NA	transcript63.chr4.nnic	NA	766108	770087	Gene ID= novel_gene_chr4_64 TPM= 6.76 Transcript Type= NA
chr4	778601	781793	778601	781793	-	transcript65.chr4.nnic@NA	transcript65.chr4.nnic	NA	778601	781793	Gene ID= novel_gene_chr4_66 TPM= 2.9 Transcript Type= NA
chr4	849278	932303	849278	932303	-	transcript70.chr4.nic@GAK	transcript70.chr4.nic	protein_coding	932043,913607,912735,911673,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,851750,850936,849892,849278	932303,913668,912794,911787,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866501,865244,859722,851974,851084,850068,849774	Gene ID= ENSG00000178950.16 TPM= 15.93 Transcript Type= NA
chr4	849278	932298	849278	932298	-	ENST00000314167.8@GAK	ENST00000314167.8	protein_coding	932043,913607,912735,911673,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,851750,850936,849892,849278	932298,913668,912794,911787,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866534,865244,859722,851974,851084,850068,849774	Gene ID= ENSG00000178950.16 TPM= 31.37 Transcript Type= protein_coding
chr4	849277	851921	849277	851921	-	ENST00000504668.5@GAK	ENST00000504668.5	protein_coding	851750,850936,849892,849277	851921,851017,850068,849774	Gene ID= ENSG00000178950.16 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr4	885935	888999	885935	888999	-	transcript82.chr4.nnic@NA	transcript82.chr4.nnic	NA	885935	888999	Gene ID= novel_gene_chr4_83 TPM= 1.93 Transcript Type= NA
chr4	901035	902612	901035	902612	+	transcript80.chr4.nnic@NA	transcript80.chr4.nnic	NA	901035	902612	Gene ID= novel_gene_chr4_81 TPM= 8.69 Transcript Type= NA
chr4	932402	958656	932402	958656	+	transcript84.chr4.nic@TMEM175	transcript84.chr4.nic	protein_coding	932402,947709,948116,950421,951207,951646,952367,953190,955405,955755,957824	932540,947892,948154,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 2.9 Transcript Type= NA
chr4	932387	958656	932387	958656	+	ENST00000264771.8@TMEM175	ENST00000264771.8	protein_coding	932387,947709,948116,950421,951207,951682,952367,953190,955405,955755,957824	932540,947892,948154,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 12.55 Transcript Type= protein_coding
chr4	932402	958656	932402	958656	+	transcript87.chr4.nic@TMEM175	transcript87.chr4.nic	protein_coding	932402,947709,948116,950421,951207,951646,952367,953190,955405,955755,957824	932540,947892,948615,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 3.86 Transcript Type= NA
chr4	932455	958656	932455	958656	+	transcript90.chr4.nic@TMEM175	transcript90.chr4.nic	protein_coding	932455,947709,950421,951207,951682,952367,953190,955405,955755,957824	932540,948154,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 2.9 Transcript Type= NA
chr4	986997	1004506	986997	1004506	+	ENST00000247933.8@IDUA	ENST00000247933.8	protein_coding	986997,987809,1000612,1000882,1001468,1001679,1001982,1002269,1002732,1003036,1003345,1003549,1004012,1004260	987242,987949,1000697,1000989,1001563,1001881,1002161,1002485,1002944,1003157,1003470,1003625,1004112,1004506	Gene ID= ENSG00000127415.12 TPM= 4.83 Transcript Type= protein_coding
chr4	1166937	1173211	1166937	1173211	-	ENST00000431380.5@SPON2	ENST00000431380.5	protein_coding	1173080,1172544,1171852,1171263,1170999,1170402,1166937	1173211,1172679,1172074,1171486,1171190,1170576,1167656	Gene ID= ENSG00000159674.11 TPM= 1.93 Transcript Type= protein_coding
chr4	1166932	1172873	1166932	1172873	-	ENST00000290902.9@SPON2	ENST00000290902.9	protein_coding	1172544,1171852,1171263,1170999,1170402,1166932	1172873,1172074,1171486,1171190,1170576,1167656	Gene ID= ENSG00000159674.11 TPM= 4.83 Transcript Type= protein_coding
chr4	1211448	1248740	1211448	1248740	-	transcript108.chr4.nic@CTBP1	transcript108.chr4.nic	protein_coding	1248661,1241325,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448	1248740,1241519,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423	Gene ID= ENSG00000159692.15 TPM= 29.3 Transcript Type= NA
chr4	1211448	1249112	1211448	1249112	-	ENST00000382952.7@CTBP1	ENST00000382952.7	protein_coding	1248916,1241325,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448	1249112,1241519,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423	Gene ID= ENSG00000159692.15 TPM= 315.99 Transcript Type= protein_coding
chr4	1211448	1249137	1211448	1249137	-	ENST00000290921.10@CTBP1	ENST00000290921.10	protein_coding	1248916,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448	1249137,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423	Gene ID= ENSG00000159692.15 TPM= 111.35 Transcript Type= protein_coding
chr4	1249262	1252569	1249262	1252569	+	transcript127.chr4.nnic@CTBP1-AS2	transcript127.chr4.nnic	antisense_RNA	1249262,1250111	1249472,1252569	Gene ID= ENSG00000196810.4 TPM= 2.9 Transcript Type= NA
chr4	1289851	1340137	1289851	1340137	+	ENST00000303400.8@MAEA	ENST00000303400.8	protein_coding	1289851,1311979,1315397,1322381,1327627,1332757,1336861,1338422,1339074	1289982,1312161,1315600,1322503,1327703,1332865,1336994,1338617,1340137	Gene ID= ENSG00000090316.15 TPM= 99.5 Transcript Type= protein_coding
chr4	1289891	1340136	1289891	1340136	+	ENST00000264750.10@MAEA	ENST00000264750.10	protein_coding	1289891,1311979,1315397,1327627,1332757,1336861,1338422,1339074	1289982,1312161,1315600,1327703,1332865,1336994,1338617,1340136	Gene ID= ENSG00000090316.15 TPM= 9.73 Transcript Type= protein_coding
chr4	1337169	1340113	1337169	1340113	+	transcript151.chr4.nnic@NA	transcript151.chr4.nnic	NA	1337169	1340113	Gene ID= novel_gene_chr4_152 TPM= 4.59 Transcript Type= NA
chr4	1347270	1350783	1347270	1350783	+	transcript154.chr4.nnic@UVSSA	transcript154.chr4.nnic	protein_coding	1347270,1348090,1349524	1347503,1348189,1350783	Gene ID= ENSG00000163945.16 TPM= 1.93 Transcript Type= NA
chr4	1692800	1712555	1692800	1712555	-	ENST00000489418.5@SLBP	ENST00000489418.5	protein_coding	1712130,1711874,1703596,1700011,1699564,1696202,1694774,1692800	1712555,1711990,1703700,1700070,1699701,1696351,1694840,1693713	Gene ID= ENSG00000163950.12 TPM= 35.72 Transcript Type= protein_coding
chr4	1715953	1721363	1715953	1721363	-	transcript168.chr4.nnic@TMEM129	transcript168.chr4.nnic	protein_coding	1721019,1720633,1718152,1717516,1715953	1721363,1720934,1718626,1717675,1717428	Gene ID= ENSG00000168936.10 TPM= 13.07 Transcript Type= NA
chr4	1715952	1721257	1715952	1721257	-	transcript174.chr4.nnic@TMEM129	transcript174.chr4.nnic	protein_coding	1721019,1720633,1718152,1715952	1721257,1720934,1718626,1717428	Gene ID= ENSG00000168936.10 TPM= 19.34 Transcript Type= NA
chr4	1715952	1721363	1715952	1721363	-	transcript175.chr4.nnic@TMEM129	transcript175.chr4.nnic	protein_coding	1721019,1720633,1718152,1715952	1721363,1720934,1718626,1717675	Gene ID= ENSG00000168936.10 TPM= 3.9 Transcript Type= NA
chr4	1715953	1721253	1715953	1721253	-	transcript183.chr4.nic@TMEM129	transcript183.chr4.nic	protein_coding	1720633,1718152,1717516,1715953	1721253,1718626,1717703,1717428	Gene ID= ENSG00000168936.10 TPM= 3.9 Transcript Type= NA
chr4	1715952	1721358	1715952	1721358	-	ENST00000303277.6@TMEM129	ENST00000303277.6	protein_coding	1720633,1718152,1715952	1721358,1718626,1717428	Gene ID= ENSG00000168936.10 TPM= 31.89 Transcript Type= protein_coding
chr4	1715952	1721106	1715952	1721106	-	transcript193.chr4.nic@TMEM129	transcript193.chr4.nic	protein_coding	1720633,1715952	1721106,1718626	Gene ID= ENSG00000168936.10 TPM= 6.8 Transcript Type= NA
chr4	1718808	1721363	1718808	1721363	-	transcript194.chr4.nnic@TMEM129	transcript194.chr4.nnic	protein_coding	1721041,1718808	1721363,1720957	Gene ID= ENSG00000168936.10 TPM= 3.86 Transcript Type= NA
chr4	1715953	1721331	1715953	1721331	-	ENST00000382936.7@TMEM129	ENST00000382936.7	protein_coding	1720633,1718152,1717516,1715953	1721331,1718626,1717675,1717428	Gene ID= ENSG00000168936.10 TPM= 75.82 Transcript Type= protein_coding
chr4	1727595	1745168	1727595	1745168	+	transcript197.chr4.nic@TACC3	transcript197.chr4.nic	protein_coding	1727595,1730887,1731172,1735273,1735731,1737241,1737598,1739702,1739959,1740826,1744518,1744712,1744948	1728787,1730962,1731301,1735325,1735834,1737328,1737702,1739778,1740002,1740986,1744624,1744832,1745168	Gene ID= ENSG00000013810.18 TPM= 2.9 Transcript Type= NA
chr4	1811479	1856247	1811479	1856247	-	ENST00000302787.2@LETM1	ENST00000302787.2	protein_coding	1855869,1849149,1841347,1836429,1834845,1832744,1825564,1823644,1822988,1822181,1819338,1816727,1815664,1811479	1856247,1849209,1841797,1836572,1834982,1832947,1825683,1823775,1823131,1822312,1819472,1816914,1815802,1814573	Gene ID= ENSG00000168924.14 TPM= 30.89 Transcript Type= protein_coding
chr4	1811479	1844909	1811479	1844909	-	transcript207.chr4.nnic@LETM1	transcript207.chr4.nnic	protein_coding	1844349,1841347,1836429,1834845,1832744,1825564,1823644,1822988,1822181,1819338,1816727,1815664,1811479	1844909,1841797,1836572,1834982,1832947,1825683,1823775,1823131,1822312,1819472,1816914,1815802,1814573	Gene ID= ENSG00000168924.14 TPM= 20.27 Transcript Type= NA
chr4	1871382	1943441	1871382	1943441	+	transcript215.chr4.nic@NSD2	transcript215.chr4.nic	protein_coding	1871382,1900626,1904216,1916871,1918141,1930626,1935144,1938451,1939654,1942339	1871542,1901251,1904378,1917037,1918623,1930770,1935262,1938532,1939778,1943441	Gene ID= ENSG00000109685.17 TPM= 8.69 Transcript Type= NA
chr4	1982730	2008978	1982730	2008978	-	transcript221.chr4.nic@NELFA	transcript221.chr4.nic	protein_coding	2008750,1991544,1989708,1987918,1986272,1985776,1984808,1983848,1983596,1982730	2008978,1991715,1989869,1988007,1986402,1986183,1984919,1984113,1983695,1983503	Gene ID= ENSG00000185049.14 TPM= 3.38 Transcript Type= NA
chr4	1983040	2008970	1983040	2008970	-	transcript223.chr4.nic@NELFA	transcript223.chr4.nic	protein_coding	2008750,1991544,1989708,1987918,1986272,1986114,1985776,1984808,1983848,1983040	2008970,1991715,1989869,1988007,1986402,1986183,1985864,1984919,1984113,1983695	Gene ID= ENSG00000185049.14 TPM= 1.93 Transcript Type= NA
chr4	1988947	2008972	1988947	2008972	-	transcript224.chr4.nic@NELFA	transcript224.chr4.nic	protein_coding	2008750,1991544,1988947	2008972,1991715,1989869	Gene ID= ENSG00000185049.14 TPM= 1.93 Transcript Type= NA
chr4	1982723	2008975	1982723	2008975	-	ENST00000411638.6@NELFA	ENST00000411638.6	protein_coding	2008750,1991544,1989708,1987918,1986272,1986114,1985776,1984808,1983848,1983596,1982723	2008975,1991715,1989869,1988007,1986402,1986183,1985864,1984919,1984113,1983695,1983503	Gene ID= ENSG00000185049.14 TPM= 48.75 Transcript Type= protein_coding
chr4	2041993	2043970	2041993	2043970	+	ENST00000409248.8@C4orf48	ENST00000409248.8	protein_coding	2041993,2042327,2042736,2043861	2042068,2042484,2042824,2043970	Gene ID= ENSG00000243449.6 TPM= 2.9 Transcript Type= protein_coding
chr4	2231841	2242153	2231841	2242153	-	transcript236.chr4.nic@HAUS3	transcript236.chr4.nic	protein_coding	2242051,2241520,2240038,2238604,2236228,2231841	2242153,2241837,2241093,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 2.9 Transcript Type= NA
chr4	2228349	2242133	2228349	2242133	-	ENST00000243706.8@HAUS3	ENST00000243706.8	protein_coding	2242051,2240038,2238604,2236228,2228349	2242133,2241093,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 1.93 Transcript Type= protein_coding
chr4	2231202	2242148	2231202	2242148	-	transcript238.chr4.nic@HAUS3	transcript238.chr4.nic	protein_coding	2241520,2240038,2238604,2236228,2231202	2242148,2241093,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 3.86 Transcript Type= NA
chr4	2231841	2242131	2231841	2242131	-	transcript243.chr4.nic@HAUS3	transcript243.chr4.nic	protein_coding	2240038,2238604,2236228,2231841	2242131,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 1.93 Transcript Type= NA
chr4	2247432	2262294	2247432	2262294	-	ENST00000337190.6@MXD4	ENST00000337190.6	protein_coding	2261917,2261725,2257982,2252408,2251084,2247432	2262294,2261824,2258011,2252522,2251246,2250701	Gene ID= ENSG00000123933.16 TPM= 40.54 Transcript Type= protein_coding
chr4	2371481	2418752	2371481	2418752	-	transcript266.chr4.nnic@ZFYVE28	transcript266.chr4.nnic	protein_coding	2418285,2374352,2371481	2418752,2374444,2373165	Gene ID= ENSG00000159733.13 TPM= 6.76 Transcript Type= NA
chr4	2468937	2515855	2468937	2515855	+	ENST00000314289.12@RNF4	ENST00000314289.12	protein_coding	2468937,2490337,2497007,2500659,2511956,2512438,2513083,2513670	2469258,2490502,2497121,2500738,2511965,2512597,2513131,2515855	Gene ID= ENSG00000063978.15 TPM= 34.75 Transcript Type= protein_coding
chr4	2536631	2731920	2536631	2731920	+	ENST00000637812.1@FAM193A	ENST00000637812.1	protein_coding	2536631,2596084,2625262,2626410,2630935,2639735,2646685,2657803,2659558,2659812,2662838,2663109,2672121,2689506,2690698,2693586,2694946,2696363,2699680,2716023,2731775	2537170,2596329,2625395,2626577,2631169,2639859,2646832,2657880,2659670,2660054,2662991,2663288,2672372,2689704,2690970,2693874,2695129,2696593,2700544,2716104,2731920	Gene ID= ENSG00000125386.15 TPM= 2.9 Transcript Type= protein_coding
chr4	2741660	2756376	2741660	2756376	-	ENST00000315423.11@TNIP2	ENST00000315423.11	protein_coding	2756014,2747655,2745446,2744697,2744387,2741660	2756376,2747945,2745535,2744945,2744506,2742520	Gene ID= ENSG00000168884.14 TPM= 156.38 Transcript Type= protein_coding
chr4	2843828	2930073	2843828	2930073	+	transcript293.chr4.nic@ADD1	transcript293.chr4.nic	protein_coding	2843828,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2909339,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2909431,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 42.99 Transcript Type= NA
chr4	2843828	2930073	2843828	2930073	+	transcript298.chr4.nic@ADD1	transcript298.chr4.nic	protein_coding	2843828,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 51.67 Transcript Type= NA
chr4	2843857	2930073	2843857	2930073	+	ENST00000264758.11@ADD1	ENST00000264758.11	protein_coding	2843857,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905108,2907844,2908604,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 46.36 Transcript Type= protein_coding
chr4	2875896	2930076	2875896	2930076	+	ENST00000398129.5@ADD1	ENST00000398129.5	protein_coding	2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2928171	2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2915040,2926112,2930076	Gene ID= ENSG00000087274.16 TPM= 46.05 Transcript Type= protein_coding
chr4	2930568	2934859	2930568	2934859	-	transcript309.chr4.nic@MFSD10	transcript309.chr4.nic	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2931061,2930568	2934859,2933944,2933663,2933177,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150,2930953	Gene ID= ENSG00000109736.14 TPM= 3.67 Transcript Type= NA
chr4	2930565	2934859	2930565	2934859	-	ENST00000355443.8@MFSD10	ENST00000355443.8	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2931061,2930565	2934859,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150,2930953	Gene ID= ENSG00000109736.14 TPM= 16.22 Transcript Type= protein_coding
chr4	2930561	2934859	2930561	2934859	-	transcript312.chr4.nic@MFSD10	transcript312.chr4.nic	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2930561	2934859,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150	Gene ID= ENSG00000109736.14 TPM= 2.7 Transcript Type= NA
chr4	2930568	2934458	2930568	2934458	-	ENST00000329687.8@MFSD10	ENST00000329687.8	protein_coding	2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2931061,2930568	2934458,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150,2930953	Gene ID= ENSG00000109736.14 TPM= 3.67 Transcript Type= protein_coding
chr4	2930561	2933947	2930561	2933947	-	ENST00000514800.5@MFSD10	ENST00000514800.5	protein_coding	2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2930561	2933947,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150	Gene ID= ENSG00000109736.14 TPM= 3.67 Transcript Type= protein_coding
chr4	2930611	2934834	2930611	2934834	-	ENST00000507555.1@MFSD10	ENST00000507555.1	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931375,2931227,2931061,2930611	2934834,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931465,2931274,2931150,2930953	Gene ID= ENSG00000109736.14 TPM= 3.86 Transcript Type= protein_coding
chr4	2935546	2951067	2935546	2951067	+	ENST00000515194.5@NOP14-AS1	ENST00000515194.5	antisense_RNA	2935546,2938693,2946873,2950153	2938142,2938792,2947120,2951067	Gene ID= ENSG00000249673.6 TPM= 1.13 Transcript Type= antisense_RNA
chr4	2937936	2963416	2937936	2963416	-	transcript321.chr4.nnic@NOP14	transcript321.chr4.nnic	protein_coding	2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2938776,2937936	2963416,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930,2938288	Gene ID= ENSG00000087269.15 TPM= 2.66 Transcript Type= NA
chr4	2937936	2963416	2937936	2963416	-	transcript322.chr4.nnic@NOP14	transcript322.chr4.nnic	protein_coding	2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2938805,2937936	2963416,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930,2938327	Gene ID= ENSG00000087269.15 TPM= 5.56 Transcript Type= NA
chr4	2938813	2963416	2938813	2963416	-	transcript332.chr4.nnic@NOP14	transcript332.chr4.nnic	protein_coding	2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2938813	2963416,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942326,2941729,2939645,2939343,2938930	Gene ID= ENSG00000087269.15 TPM= 2.09 Transcript Type= NA
chr4	2937933	2963385	2937933	2963385	-	ENST00000416614.6@NOP14	ENST00000416614.6	protein_coding	2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2937933	2963385,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930	Gene ID= ENSG00000087269.15 TPM= 3.48 Transcript Type= protein_coding
chr4	2937942	2963368	2937942	2963368	-	ENST00000314262.10@NOP14	ENST00000314262.10	protein_coding	2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2938812,2937942	2963368,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930,2938188	Gene ID= ENSG00000087269.15 TPM= 2.51 Transcript Type= protein_coding
chr4	3041600	3042386	3041600	3042386	+	transcript351.chr4.nnic@NA	transcript351.chr4.nnic	NA	3041600	3042386	Gene ID= novel_gene_chr4_352 TPM= 2.9 Transcript Type= NA
chr4	3074681	3243959	3074681	3243959	+	ENST00000355072.9@HTT	ENST00000355072.9	protein_coding	3074681,3086939,3099274,3103824,3105357,3107285,3115304,3116085,3121228,3122889,3125549,3127264,3129924,3130305,3131286,3131638,3132562,3132814,3134401,3135904,3136226,3140510,3142766,3145152,3146797,3148005,3154293,3157072,3160282,3172320,3172908,3174721,3174946,3177332,3178298,3180515,3182354,3186597,3187651,3188951,3199732,3204007,3206496,3206807,3207281,3208773,3209827,3211929,3212564,3213958,3215110,3217765,3220182,3222387,3223406,3223992,3225661,3228615,3228880,3229887,3233163,3235284,3235565,3236149,3238447,3238818,3239846	3075088,3087022,3099394,3103883,3105436,3107423,3115445,3116263,3121432,3122936,3125629,3127604,3130047,3130423,3131397,3131775,3132720,3132911,3134540,3135967,3136326,3140656,3142886,3145228,3146948,3148207,3154419,3157199,3160392,3172397,3173131,3174799,3175107,3177387,3178446,3180651,3182470,3186719,3187886,3189093,3199939,3204148,3206675,3206983,3207357,3208911,3209949,3212142,3212709,3214135,3215211,3217952,3220308,3222487,3223560,3224131,3225743,3228745,3229009,3230042,3233353,3235398,3235778,3236254,3238609,3238978,3243959	Gene ID= ENSG00000197386.10 TPM= 10.14 Transcript Type= protein_coding
chr4	3222304	3240659	3222304	3240659	+	transcript356.chr4.nic@HTT	transcript356.chr4.nic	protein_coding	3222304,3223406,3223992,3225661,3228615,3228880,3229887,3233163,3235284,3235565,3236149,3238447,3238818,3239846	3222487,3223560,3224131,3225743,3228745,3229009,3230042,3233353,3235398,3235778,3236254,3238609,3238978,3240659	Gene ID= ENSG00000197386.10 TPM= 16.89 Transcript Type= NA
chr4	3291350	3292782	3291350	3292782	-	transcript358.chr4.nnic@NA	transcript358.chr4.nnic	NA	3291350	3292782	Gene ID= novel_gene_chr4_359 TPM= 6.76 Transcript Type= NA
chr4	3289548	3292731	3289548	3292731	-	transcript360.chr4.nnic@NA	transcript360.chr4.nnic	NA	3289548	3292731	Gene ID= novel_gene_chr4_359 TPM= 1.93 Transcript Type= NA
chr4	3293006	3428592	3293006	3428592	+	transcript363.chr4.nnic@RGS12	transcript363.chr4.nnic	protein_coding	3293006,3316070,3342937,3386416,3414072,3414752,3415978,3416913,3417388,3420642,3422376,3422905,3423515,3425464,3428090,3428558	3293099,3318051,3343053,3386437,3414241,3414844,3416121,3417092,3417541,3420718,3422570,3422978,3423641,3425560,3428169,3428592	Gene ID= ENSG00000159788.18 TPM= 14.48 Transcript Type= NA
chr4	3463311	3494483	3463311	3494483	+	ENST00000340083.5@DOK7	ENST00000340083.5	protein_coding	3463311,3463506,3473406,3476342,3485539,3489677,3492759	3463429,3463551,3473636,3476542,3485658,3489796,3494483	Gene ID= ENSG00000175920.16 TPM= 93.77 Transcript Type= protein_coding
chr4	3463347	3494481	3463347	3494481	+	transcript378.chr4.nic@DOK7	transcript378.chr4.nic	protein_coding	3463347,3473406,3476342,3485539,3489677,3492759	3463551,3473636,3476531,3485658,3489796,3494481	Gene ID= ENSG00000175920.16 TPM= 8.82 Transcript Type= NA
chr4	3484351	3494481	3484351	3494481	+	transcript384.chr4.nnic@DOK7	transcript384.chr4.nnic	protein_coding	3484351,3485539,3489677,3492759	3485160,3485658,3489796,3494481	Gene ID= ENSG00000175920.16 TPM= 18.48 Transcript Type= NA
chr4	3463311	3494483	3463311	3494483	+	ENST00000507039.5@DOK7	ENST00000507039.5	protein_coding	3463311,3463506,3473406,3476342,3485539,3489677,3492759	3463429,3463551,3473636,3476531,3485658,3489796,3494483	Gene ID= ENSG00000175920.16 TPM= 14.61 Transcript Type= protein_coding
chr4	3484544	3494481	3484544	3494481	+	ENST00000515886.5@DOK7	ENST00000515886.5	protein_coding	3484544,3485539,3489677,3492759	3484843,3485658,3489796,3494481	Gene ID= ENSG00000175920.16 TPM= 6.89 Transcript Type= protein_coding
chr4	3506376	3532559	3506376	3532559	-	ENST00000500728.2@LRPAP1	ENST00000500728.2	protein_coding	3532209,3524907,3520072,3518871,3518034,3516116,3514752,3506376	3532559,3525051,3520193,3518991,3518192,3516198,3514928,3513036	Gene ID= ENSG00000163956.10 TPM= 311.8 Transcript Type= protein_coding
chr4	3758744	3762550	3758744	3762550	-	transcript396.chr4.nnic@NA	transcript396.chr4.nnic	NA	3758744	3762550	Gene ID= novel_gene_chr4_397 TPM= 1.93 Transcript Type= NA
chr4	3766398	3768526	3766398	3768526	+	ENST00000330055.6@ADRA2C	ENST00000330055.6	protein_coding	3766398	3768526	Gene ID= ENSG00000184160.7 TPM= 1.93 Transcript Type= protein_coding
chr4	4235553	4248212	4235553	4248212	-	ENST00000382753.4@TMEM128	ENST00000382753.4	protein_coding	4248106,4246202,4240321,4237827,4235553	4248212,4246343,4240479,4237935,4236256	Gene ID= ENSG00000132406.11 TPM= 2.9 Transcript Type= protein_coding
chr4	4274615	4290196	4274615	4290196	-	transcript411.chr4.nic@LYAR	transcript411.chr4.nic	protein_coding	4290036,4286519,4283621,4281783,4279642,4279447,4274615	4290196,4286572,4283795,4281897,4279749,4279530,4274769	Gene ID= ENSG00000145220.13 TPM= 8.69 Transcript Type= NA
chr4	4267701	4290169	4267701	4290169	-	ENST00000343470.8@LYAR	ENST00000343470.8	protein_coding	4290036,4286519,4283621,4281783,4279642,4279447,4274367,4273583,4268530,4267701	4290169,4286572,4283795,4281897,4279749,4279530,4274769,4273669,4268615,4268023	Gene ID= ENSG00000145220.13 TPM= 4.83 Transcript Type= protein_coding
chr4	4419478	4542012	4419478	4542012	-	transcript420.chr4.nnic@STX18	transcript420.chr4.nnic	protein_coding	4541797,4471639,4459372,4457423,4457191,4453621,4438394,4434770,4425164,4423518,4420864,4419478	4542012,4471706,4459487,4457500,4457257,4453673,4438509,4434858,4425222,4423587,4420944,4420129	Gene ID= ENSG00000168818.9 TPM= 3.86 Transcript Type= NA
chr4	4418968	4542028	4418968	4542028	-	ENST00000306200.6@STX18	ENST00000306200.6	protein_coding	4541797,4471639,4459372,4457423,4457191,4438394,4434770,4425164,4423518,4420864,4418968	4542028,4471706,4459487,4457500,4457257,4438509,4434858,4425222,4423587,4420944,4420129	Gene ID= ENSG00000168818.9 TPM= 10.62 Transcript Type= protein_coding
chr4	4859666	4863936	4859666	4863936	+	ENST00000382723.4@MSX1	ENST00000382723.4	protein_coding	4859666,4862701	4860368,4863936	Gene ID= ENSG00000163132.6 TPM= 5.79 Transcript Type= protein_coding
chr4	5820783	5888481	5820783	5888481	-	ENST00000397890.6@CRMP1	ENST00000397890.6	protein_coding	5888228,5866668,5861026,5856143,5851408,5849392,5843093,5841308,5839522,5836765,5835915,5828489,5825494,5820783	5888481,5866756,5861210,5856307,5851469,5849472,5843161,5841428,5839678,5836906,5836085,5828668,5825659,5821851	Gene ID= ENSG00000072832.14 TPM= 2.9 Transcript Type= protein_coding
chr4	6269850	6303265	6269850	6303265	+	ENST00000226760.5@WFS1	ENST00000226760.5	protein_coding	6269850,6277451,6287093,6288987,6291197,6291917,6295041,6300657	6270014,6277687,6287175,6289131,6291367,6291997,6295189,6303265	Gene ID= ENSG00000109501.13 TPM= 16.89 Transcript Type= protein_coding
chr4	6269849	6302883	6269849	6302883	+	ENST00000503569.5@WFS1	ENST00000503569.5	protein_coding	6269849,6277455,6287093,6288987,6291197,6291917,6295041,6300657	6270014,6277687,6287175,6289131,6291367,6291997,6295189,6302883	Gene ID= ENSG00000109501.13 TPM= 5.31 Transcript Type= protein_coding
chr4	6640091	6642729	6640091	6642729	+	ENST00000320912.8@MRFAP1	ENST00000320912.8	protein_coding	6640091,6640828,6641730	6640708,6641258,6642729	Gene ID= ENSG00000179010.14 TPM= 110.53 Transcript Type= protein_coding
chr4	6640691	6642745	6640691	6642745	+	ENST00000382581.4@MRFAP1	ENST00000382581.4	protein_coding	6640691,6641730	6641258,6642745	Gene ID= ENSG00000179010.14 TPM= 226.37 Transcript Type= protein_coding
chr4	6673451	6676047	6673451	6676047	+	ENST00000307533.10@AC093323.1	ENST00000307533.10	lincRNA	6673451,6674993	6674706,6676047	Gene ID= ENSG00000170846.16 TPM= 10.62 Transcript Type= lincRNA
chr4	6673969	6676013	6673969	6676013	+	ENST00000635031.1@AC093323.1	ENST00000635031.1	lincRNA	6673969	6676013	Gene ID= ENSG00000170846.16 TPM= 14.48 Transcript Type= lincRNA
chr4	6674088	6676047	6674088	6676047	+	ENST00000444232.3@AC093323.1	ENST00000444232.3	lincRNA	6674088,6674993	6674637,6676047	Gene ID= ENSG00000170846.16 TPM= 8.69 Transcript Type= lincRNA
chr4	6707701	6709880	6707701	6709880	-	ENST00000320848.6@MRFAP1L1	ENST00000320848.6	protein_coding	6709231,6707701	6709880,6708643	Gene ID= ENSG00000178988.10 TPM= 68.54 Transcript Type= protein_coding
chr4	6707701	6709827	6707701	6709827	-	ENST00000500563.2@MRFAP1L1	ENST00000500563.2	protein_coding	6707701	6709827	Gene ID= ENSG00000178988.10 TPM= 6.76 Transcript Type= retained_intron
chr4	6716055	6717671	6716055	6717671	+	ENST00000320776.4@BLOC1S4	ENST00000320776.4	protein_coding	6716055	6717671	Gene ID= ENSG00000186222.4 TPM= 10.62 Transcript Type= protein_coding
chr4	6782637	6864759	6782637	6864759	+	transcript462.chr4.nic@KIAA0232	transcript462.chr4.nic	protein_coding	6782637,6824185,6842067,6857164,6858425,6860901	6782841,6824684,6842204,6857230,6858506,6864759	Gene ID= ENSG00000170871.11 TPM= 5.47 Transcript Type= NA
chr4	6881986	6883365	6881986	6883365	+	transcript466.chr4.nnic@NA	transcript466.chr4.nnic	NA	6881986	6883365	Gene ID= novel_gene_chr4_467 TPM= 4.83 Transcript Type= NA
chr4	6909765	7033111	6909765	7033111	+	transcript473.chr4.nnic@TBC1D14	transcript473.chr4.nnic	protein_coding	6909765,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7010653,7014448,7025004,7030327	6909951,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 16.41 Transcript Type= NA
chr4	6987197	7033111	6987197	7033111	+	transcript479.chr4.nnic@TBC1D14	transcript479.chr4.nnic	protein_coding	6987197,6994184,6996325,6999085,7000370,7001145,7004844,7006632,7010653,7014448,7025004,7030327	6987349,6994302,6996407,6999202,7000457,7001251,7004924,7006726,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 5.15 Transcript Type= NA
chr4	6987162	7033114	6987162	7033114	+	ENST00000451522.6@TBC1D14	ENST00000451522.6	protein_coding	6987162,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327	6987349,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033114	Gene ID= ENSG00000132405.18 TPM= 5.63 Transcript Type= protein_coding
chr4	6987197	7033111	6987197	7033111	+	transcript481.chr4.nnic@TBC1D14	transcript481.chr4.nnic	protein_coding	6987197,6994184,6996325,6999085,7001145,7004844,7006632,7010653,7014448,7025004,7030327	6987349,6994302,6996407,6999202,7001251,7004924,7006726,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 7.08 Transcript Type= NA
chr4	6909444	7033118	6909444	7033118	+	ENST00000448507.5@TBC1D14	ENST00000448507.5	protein_coding	6909444,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327	6909505,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033118	Gene ID= ENSG00000132405.18 TPM= 6.27 Transcript Type= protein_coding
chr4	6909845	7033111	6909845	7033111	+	ENST00000409757.8@TBC1D14	ENST00000409757.8	protein_coding	6909845,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327	6909951,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 5.79 Transcript Type= protein_coding
chr4	6985921	6987069	6985921	6987069	-	transcript485.chr4.nnic@NA	transcript485.chr4.nnic	NA	6985921	6987069	Gene ID= novel_gene_chr4_486 TPM= 13.51 Transcript Type= NA
chr4	7040850	7043969	7040850	7043969	-	transcript495.chr4.nnic@NA	transcript495.chr4.nnic	NA	7040850	7043969	Gene ID= novel_gene_chr4_496 TPM= 2.9 Transcript Type= NA
chr4	7043391	7057952	7043391	7057952	+	ENST00000310074.7@TADA2B	ENST00000310074.7	protein_coding	7043391,7054062	7043849,7057952	Gene ID= ENSG00000173011.11 TPM= 117.77 Transcript Type= protein_coding
chr4	7960120	7962554	7960120	7962554	+	transcript634.chr4.nnic@NA	transcript634.chr4.nnic	NA	7960120	7962554	Gene ID= novel_gene_chr4_635 TPM= 21.24 Transcript Type= NA
chr4	7965329	8127740	7965329	8127740	-	transcript513.chr4.nnic@ABLIM2	transcript513.chr4.nnic	protein_coding	8127547,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8029656,8027759,8020202,8019618,8009050,8008059,7992866,7984839,7983547,7983264,7965329	8127740,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8029776,8027857,8020303,8019671,8009102,8008197,7992927,7984893,7983554,7983344,7967103	Gene ID= ENSG00000163995.19 TPM= 35.2 Transcript Type= NA
chr4	7965329	8158813	7965329	8158813	-	transcript514.chr4.nic@ABLIM2	transcript514.chr4.nic	protein_coding	8158680,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8029656,8027759,8020202,8019618,8009050,8008059,7992866,7984839,7983547,7983264,7965329	8158813,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8029776,8027857,8020303,8019671,8009102,8008197,7992927,7984893,7983554,7983344,7967103	Gene ID= ENSG00000163995.19 TPM= 31.79 Transcript Type= NA
chr4	7965329	8127740	7965329	8127740	-	transcript527.chr4.nnic@ABLIM2	transcript527.chr4.nnic	protein_coding	8127547,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8029656,8027759,8020202,8019618,8009050,8008059,7983547,7983264,7965329	8127740,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8029776,8027857,8020303,8019671,8009102,8008200,7983554,7983344,7967103	Gene ID= ENSG00000163995.19 TPM= 29.86 Transcript Type= NA
chr4	8019462	8127740	8019462	8127740	-	transcript546.chr4.nnic@ABLIM2	transcript546.chr4.nnic	protein_coding	8127547,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8029656,8027759,8020202,8019462	8127740,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8029776,8027857,8020303,8019671	Gene ID= ENSG00000163995.19 TPM= 12.8 Transcript Type= NA
chr4	8019462	8158812	8019462	8158812	-	transcript547.chr4.nic@ABLIM2	transcript547.chr4.nic	protein_coding	8158680,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8029656,8027759,8020202,8019462	8158812,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8029776,8027857,8020303,8019671	Gene ID= ENSG00000163995.19 TPM= 18.08 Transcript Type= NA
chr4	8077131	8127740	8077131	8127740	-	transcript560.chr4.nnic@ABLIM2	transcript560.chr4.nnic	protein_coding	8127547,8106494,8097099,8088169,8080676,8077628,8077131	8127740,8106637,8097282,8088284,8080802,8077721,8077493	Gene ID= ENSG00000163995.19 TPM= 11.58 Transcript Type= NA
chr4	8095012	8127740	8095012	8127740	-	transcript584.chr4.nnic@ABLIM2	transcript584.chr4.nnic	protein_coding	8127547,8106494,8097099,8095012	8127740,8106637,8097282,8096597	Gene ID= ENSG00000163995.19 TPM= 13.03 Transcript Type= NA
chr4	8110568	8127665	8110568	8127665	-	transcript620.chr4.nnic@ABLIM2	transcript620.chr4.nnic	protein_coding	8127547,8110568	8127665,8110891	Gene ID= ENSG00000163995.19 TPM= 2.9 Transcript Type= NA
chr4	8124130	8127664	8124130	8127664	-	transcript626.chr4.nnic@ABLIM2	transcript626.chr4.nnic	protein_coding	8127547,8124130	8127664,8125692	Gene ID= ENSG00000163995.19 TPM= 2.9 Transcript Type= NA
chr4	8124249	8127740	8124249	8127740	-	transcript628.chr4.nnic@ABLIM2	transcript628.chr4.nnic	protein_coding	8127547,8124249	8127740,8125692	Gene ID= ENSG00000163995.19 TPM= 7.72 Transcript Type= NA
chr4	8007025	8158832	8007025	8158832	-	ENST00000428004.6@ABLIM2	ENST00000428004.6	protein_coding	8158680,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8032648,8029656,8009050,8007025	8158832,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8032680,8029776,8009102,8008200	Gene ID= ENSG00000163995.19 TPM= 12.8 Transcript Type= protein_coding
chr4	7986680	7989170	7986680	7989170	-	transcript650.chr4.nnic@NA	transcript650.chr4.nnic	NA	7986680	7989170	Gene ID= novel_gene_chr4_651 TPM= 1.93 Transcript Type= NA
chr4	7991770	7994193	7991770	7994193	+	transcript638.chr4.nnic@NA	transcript638.chr4.nnic	NA	7991770	7994193	Gene ID= novel_gene_chr4_639 TPM= 1.93 Transcript Type= NA
chr4	8023007	8026290	8023007	8026290	-	transcript652.chr4.nnic@NA	transcript652.chr4.nnic	NA	8023007	8026290	Gene ID= novel_gene_chr4_653 TPM= 12.55 Transcript Type= NA
chr4	8058284	8059925	8058284	8059925	+	transcript640.chr4.nnic@NA	transcript640.chr4.nnic	NA	8058284	8059925	Gene ID= novel_gene_chr4_641 TPM= 8.69 Transcript Type= NA
chr4	8094345	8094930	8094345	8094930	-	transcript656.chr4.nnic@NA	transcript656.chr4.nnic	NA	8094345	8094930	Gene ID= novel_gene_chr4_657 TPM= 2.9 Transcript Type= NA
chr4	8095123	8099668	8095123	8099668	-	transcript658.chr4.nnic@NA	transcript658.chr4.nnic	NA	8095123	8099668	Gene ID= novel_gene_chr4_659 TPM= 8.69 Transcript Type= NA
chr4	8105970	8109517	8105970	8109517	-	transcript660.chr4.nnic@NA	transcript660.chr4.nnic	NA	8105970	8109517	Gene ID= novel_gene_chr4_661 TPM= 3.86 Transcript Type= NA
chr4	8110688	8111944	8110688	8111944	+	transcript642.chr4.nnic@NA	transcript642.chr4.nnic	NA	8110688	8111944	Gene ID= novel_gene_chr4_643 TPM= 18.34 Transcript Type= NA
chr4	8121220	8127082	8121220	8127082	+	transcript636.chr4.nnic@NA	transcript636.chr4.nnic	NA	8121220	8127082	Gene ID= novel_gene_chr4_637 TPM= 16.41 Transcript Type= NA
chr4	8146543	8149945	8146543	8149945	-	transcript648.chr4.nnic@NA	transcript648.chr4.nnic	NA	8146543	8149945	Gene ID= novel_gene_chr4_649 TPM= 6.76 Transcript Type= NA
chr4	8157869	8160126	8157869	8160126	+	transcript644.chr4.nnic@NA	transcript644.chr4.nnic	NA	8157869	8160126	Gene ID= novel_gene_chr4_645 TPM= 6.76 Transcript Type= NA
chr4	8199367	8241103	8199367	8241103	+	ENST00000245105.7@SH3TC1	ENST00000245105.7	protein_coding	8199367,8205167,8209748,8212701,8214475,8216111,8216957,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698	8199405,8205366,8209822,8212828,8214580,8216257,8217167,8218347,8219530,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241103	Gene ID= ENSG00000125089.16 TPM= 3.86 Transcript Type= protein_coding
chr4	8269749	8296478	8269749	8296478	+	transcript670.chr4.nnic@HTRA3	transcript670.chr4.nnic	protein_coding	8269749,8282437,8286561,8291370,8292321,8294087,8295765	8270353,8282536,8286783,8291564,8292353,8294201,8296478	Gene ID= ENSG00000170801.9 TPM= 5.79 Transcript Type= NA
chr4	8269765	8307111	8269765	8307111	+	ENST00000307358.6@HTRA3	ENST00000307358.6	protein_coding	8269765,8282437,8286561,8291370,8292321,8294087,8302463,8304184,8305971	8270353,8282536,8286783,8291564,8292353,8294201,8302511,8304279,8307111	Gene ID= ENSG00000170801.9 TPM= 61.78 Transcript Type= protein_coding
chr4	8269777	8296474	8269777	8296474	+	ENST00000382512.3@HTRA3	ENST00000382512.3	protein_coding	8269777,8282437,8286561,8291370,8292321,8294087,8295695	8270353,8282536,8286783,8291564,8292353,8294201,8296474	Gene ID= ENSG00000170801.9 TPM= 23.17 Transcript Type= protein_coding
chr4	8366712	8428493	8366712	8428493	-	transcript684.chr4.nnic@ACOX3	transcript684.chr4.nnic	protein_coding	8428351,8416378,8415766,8414854,8414292,8405955,8399556,8396937,8394620,8392333,8389612,8389173,8381492,8374978,8373561,8370908,8366712	8428493,8416535,8415999,8414928,8414381,8406043,8399652,8397119,8394742,8392453,8389734,8389286,8381607,8375152,8373628,8370994,8367080	Gene ID= ENSG00000087008.15 TPM= 3.86 Transcript Type= NA
chr4	8393535	8428493	8393535	8428493	-	transcript691.chr4.nic@ACOX3	transcript691.chr4.nic	protein_coding	8428351,8416378,8415766,8414854,8414292,8410212,8405955,8399556,8396937,8393535	8428493,8416535,8415999,8414928,8414381,8410355,8406043,8399652,8397119,8394742	Gene ID= ENSG00000087008.15 TPM= 1.93 Transcript Type= NA
chr4	8440823	8476526	8440823	8476526	+	ENST00000389737.4@TRMT44	ENST00000389737.4	protein_coding	8440823,8446476,8449669,8451960,8452882,8454742,8463985,8465378,8467914,8471084,8475772	8441441,8446590,8449888,8452028,8452989,8454813,8464091,8465561,8468346,8471200,8476526	Gene ID= ENSG00000155275.18 TPM= 4.83 Transcript Type= protein_coding
chr4	8509207	8512910	8509207	8512910	+	transcript700.chr4.nic@AC105345.1	transcript700.chr4.nic	lincRNA	8509207,8510262,8511831	8509799,8511003,8512910	Gene ID= ENSG00000205959.3 TPM= 1.93 Transcript Type= NA
chr4	10074339	10116860	10074339	10116860	-	ENST00000499869.6@WDR1	ENST00000499869.6	protein_coding	10116651,10116113,10103896,10098992,10097711,10088664,10088293,10087707,10084443,10083022,10081357,10078891,10077753,10077304,10074339	10116860,10116234,10103986,10099139,10097891,10088741,10088373,10087940,10084530,10083178,10081444,10079001,10077926,10077448,10075484	Gene ID= ENSG00000071127.16 TPM= 51.16 Transcript Type= protein_coding
chr4	10442707	10457427	10442707	10457427	-	transcript719.chr4.nnic@ZNF518B	transcript719.chr4.nnic	protein_coding	10457317,10454594,10442707	10457427,10454988,10446539	Gene ID= ENSG00000178163.7 TPM= 2.9 Transcript Type= NA
chr4	10450891	10457427	10450891	10457427	-	transcript721.chr4.nnic@ZNF518B	transcript721.chr4.nnic	protein_coding	10457317,10454594,10450891	10457427,10454988,10453453	Gene ID= ENSG00000178163.7 TPM= 2.9 Transcript Type= NA
chr4	10450887	10457410	10450887	10457410	-	ENST00000503068.1@ZNF518B	ENST00000503068.1	protein_coding	10457317,10450887	10457410,10454988	Gene ID= ENSG00000178163.7 TPM= 6.76 Transcript Type= retained_intron
chr4	10456579	10457287	10456579	10457287	-	transcript731.chr4.nnic@NA	transcript731.chr4.nnic	NA	10456579	10457287	Gene ID= novel_gene_chr4_732 TPM= 1.93 Transcript Type= NA
chr4	13367724	13484365	13367724	13484365	-	ENST00000288723.8@RAB28	ENST00000288723.8	protein_coding	13484076,13479430,13474318,13460699,13381491,13376545,13369871,13367724	13484365,13479526,13474406,13460828,13381594,13376622,13369965,13368650	Gene ID= ENSG00000157869.14 TPM= 1.93 Transcript Type= protein_coding
chr4	13367724	13484365	13367724	13484365	-	ENST00000330852.9@RAB28	ENST00000330852.9	protein_coding	13484076,13479430,13474318,13460699,13381491,13376545,13367724	13484365,13479526,13474406,13460828,13381594,13376622,13368650	Gene ID= ENSG00000157869.14 TPM= 7.72 Transcript Type= protein_coding
chr4	13608565	13627732	13608565	13627732	-	transcript741.chr4.nic@BOD1L1	transcript741.chr4.nic	protein_coding	13627345,13619943,13615312,13614196,13613512,13610934,13609295,13608565	13627732,13620067,13615502,13614810,13613661,13611100,13609406,13608668	Gene ID= ENSG00000038219.12 TPM= 2.9 Transcript Type= NA
chr4	13625537	13627716	13625537	13627716	-	transcript748.chr4.nic@BOD1L1	transcript748.chr4.nic	protein_coding	13627345,13625537	13627716,13626312	Gene ID= ENSG00000038219.12 TPM= 1.93 Transcript Type= NA
chr4	15002674	15070153	15002674	15070153	+	ENST00000442003.6@CPEB2	ENST00000442003.6	protein_coding	15002674,15007305,15017188,15033161,15040464,15052414,15054128,15058421,15059187,15062079,15066153	15004335,15007595,15017278,15033211,15040487,15052584,15054217,15058539,15059301,15062260,15070153	Gene ID= ENSG00000137449.15 TPM= 2.9 Transcript Type= protein_coding
chr4	15003936	15070151	15003936	15070151	+	ENST00000382395.7@CPEB2	ENST00000382395.7	protein_coding	15003936,15007305,15017188,15033161,15040464,15052414,15054128,15058421,15059187,15062079,15066153	15004335,15007586,15017278,15033211,15040487,15052584,15054217,15058539,15059301,15062260,15070151	Gene ID= ENSG00000137449.15 TPM= 2.9 Transcript Type= protein_coding
chr4	15605006	15655382	15605006	15655382	-	ENST00000412094.6@FBXL5	ENST00000412094.6	protein_coding	15655204,15644493,15640788,15638508,15636494,15630666,15627885,15626873,15625252,15612266,15605006	15655382,15644657,15640883,15638694,15636676,15630791,15628033,15626955,15625977,15612414,15605799	Gene ID= ENSG00000118564.14 TPM= 32.82 Transcript Type= protein_coding
chr4	15681752	15686606	15681752	15686606	+	ENST00000509022.5@FAM200B	ENST00000509022.5	protein_coding	15681752,15686236	15681901,15686606	Gene ID= ENSG00000237765.6 TPM= 2.9 Transcript Type= processed_transcript
chr4	15777563	15778871	15777563	15778871	-	transcript786.chr4.nnic@NA	transcript786.chr4.nnic	NA	15777563	15778871	Gene ID= novel_gene_chr4_787 TPM= 1.93 Transcript Type= NA
chr4	15778278	15853230	15778278	15853230	+	ENST00000226279.7@CD38	ENST00000226279.7	protein_coding	15778278,15816511,15824881,15834217,15838092,15840026,15840452,15848539	15778647,15816640,15825016,15834302,15838165,15840118,15840538,15853230	Gene ID= ENSG00000004468.12 TPM= 1.93 Transcript Type= protein_coding
chr4	16161291	16227081	16161291	16227081	-	transcript793.chr4.nic@TAPT1	transcript793.chr4.nic	protein_coding	16226259,16213768,16202462,16191361,16188220,16186781,16186535,16179577,16176119,16174670,16174204,16166633,16161291	16227081,16213898,16202580,16191523,16188355,16186878,16186604,16179657,16176228,16174729,16174272,16166793,16163537	Gene ID= ENSG00000169762.16 TPM= 6.76 Transcript Type= NA
chr4	16501541	16898809	16501541	16898809	-	ENST00000304523.9@LDB2	ENST00000304523.9	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508535,16501541	16898809,16759260,16595875,16588832,16586005,16512104,16508686,16502873	Gene ID= ENSG00000169744.12 TPM= 2.9 Transcript Type= protein_coding
chr4	16501541	16898594	16501541	16898594	-	ENST00000441778.6@LDB2	ENST00000441778.6	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508535,16505840,16501541	16898594,16759260,16595875,16588832,16586005,16512104,16508686,16505982,16502873	Gene ID= ENSG00000169744.12 TPM= 3.86 Transcript Type= protein_coding
chr4	17486398	17512234	17486398	17512234	-	ENST00000281243.9@QDPR	ENST00000281243.9	protein_coding	17511950,17509271,17504379,17501719,17492232,17490662,17486398	17512234,17509363,17504475,17501859,17492340,17490745,17487236	Gene ID= ENSG00000151552.11 TPM= 52.13 Transcript Type= protein_coding
chr4	17486398	17512069	17486398	17512069	-	ENST00000507439.5@QDPR	ENST00000507439.5	protein_coding	17511950,17509271,17504379,17501719,17490662,17486398	17512069,17509363,17504475,17501859,17490745,17487236	Gene ID= ENSG00000151552.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr4	17577192	17607968	17577192	17607968	+	ENST00000226299.8@LAP3	ENST00000226299.8	protein_coding	17577192,17579824,17581760,17582288,17583483,17584972,17588819,17595410,17597046,17598456,17604588,17606829,17607400	17577567,17579939,17581814,17582393,17583642,17585136,17588977,17595534,17597134,17598558,17604667,17606938,17607968	Gene ID= ENSG00000002549.12 TPM= 114.87 Transcript Type= protein_coding
chr4	17614610	17628167	17614610	17628167	+	transcript826.chr4.nnic@MED28	transcript826.chr4.nnic	protein_coding	17614610,17619901,17621587,17623601,17628006	17614813,17619967,17621699,17623794,17628167	Gene ID= ENSG00000118579.12 TPM= 5.79 Transcript Type= NA
chr4	17614610	17628170	17614610	17628170	+	transcript834.chr4.nnic@MED28	transcript834.chr4.nnic	protein_coding	17614610,17619901,17621587,17628006	17614813,17619967,17621699,17628170	Gene ID= ENSG00000118579.12 TPM= 5.79 Transcript Type= NA
chr4	17614664	17628170	17614664	17628170	+	ENST00000503945.2@MED28	ENST00000503945.2	protein_coding	17614664,17619901,17621587,17623601,17625656,17628006	17614813,17619967,17621699,17623794,17625845,17628170	Gene ID= ENSG00000118579.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr4	17614631	17634105	17614631	17634105	+	ENST00000237380.11@MED28	ENST00000237380.11	protein_coding	17614631,17619901,17621587,17623601	17614813,17619967,17621699,17634105	Gene ID= ENSG00000118579.12 TPM= 30.89 Transcript Type= protein_coding
chr4	17810831	17843504	17810831	17843504	+	transcript841.chr4.nnic@NCAPG	transcript841.chr4.nnic	protein_coding	17810831,17812917,17814853,17815274,17817261,17817939,17822983,17823647,17824968,17825382,17828278,17830997,17834299,17837159,17837627,17839676,17840071,17840607,17842310,17843302	17811188,17813145,17814998,17815358,17817453,17818088,17823123,17823770,17825057,17825561,17828388,17831116,17834523,17837340,17837801,17839837,17840209,17840693,17842379,17843504	Gene ID= ENSG00000109805.9 TPM= 1.93 Transcript Type= NA
chr4	22345071	22516098	22345071	22516098	-	transcript857.chr4.nic@ADGRA3	transcript857.chr4.nic	protein_coding	22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22413182,22402675,22401431,22392545,22389088,22346733,22345071	22516098,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390,22402799,22401554,22392690,22389183,22346823,22345345	Gene ID= ENSG00000152990.13 TPM= 1.93 Transcript Type= NA
chr4	22387375	22516055	22387375	22516055	-	transcript860.chr4.nic@ADGRA3	transcript860.chr4.nic	protein_coding	22515528,22473772,22461737,22454866,22447440,22445041,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22413182,22402675,22401431,22392545,22389088,22387375	22516055,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390,22402799,22401554,22392690,22389183,22388947	Gene ID= ENSG00000152990.13 TPM= 1.93 Transcript Type= NA
chr4	22411989	22516089	22411989	22516089	-	transcript870.chr4.nic@ADGRA3	transcript870.chr4.nic	protein_coding	22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22411989	22516089,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390	Gene ID= ENSG00000152990.13 TPM= 3.86 Transcript Type= NA
chr4	22387375	22516054	22387375	22516054	-	ENST00000334304.9@ADGRA3	ENST00000334304.9	protein_coding	22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22413182,22402675,22401431,22392545,22389088,22387375	22516054,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390,22402799,22401554,22392690,22389183,22388947	Gene ID= ENSG00000152990.13 TPM= 28.96 Transcript Type= protein_coding
chr4	22515414	22516943	22515414	22516943	+	transcript873.chr4.nnic@NA	transcript873.chr4.nnic	NA	22515414	22516943	Gene ID= novel_gene_chr4_874 TPM= 3.86 Transcript Type= NA
chr4	23792021	23890077	23792021	23890077	-	ENST00000264867.6@PPARGC1A	ENST00000264867.6	protein_coding	23889904,23884752,23831557,23829463,23828400,23824463,23824280,23813690,23813021,23812747,23802224,23801730,23792021	23890077,23884931,23831751,23829585,23828604,23824508,23824353,23814605,23813125,23812867,23802345,23801881,23795925	Gene ID= ENSG00000109819.8 TPM= 15.44 Transcript Type= protein_coding
chr4	24527477	24584545	24527477	24584545	-	transcript899.chr4.nic@DHX15	transcript899.chr4.nic	protein_coding	24584323,24576243,24570654,24556251,24554725,24548855,24542940,24541873,24540840,24537051,24532864,24529601,24527477	24584545,24576678,24570847,24556410,24554943,24549022,24543026,24542022,24540948,24540299,24533054,24529770,24528041	Gene ID= ENSG00000109606.12 TPM= 2.9 Transcript Type= NA
chr4	24527475	24584550	24527475	24584550	-	ENST00000336812.4@DHX15	ENST00000336812.4	protein_coding	24584323,24576243,24570654,24556251,24554725,24548855,24542940,24541873,24540840,24540108,24537051,24532864,24529601,24527475	24584550,24576678,24570847,24556410,24554943,24549022,24543026,24542022,24540948,24540299,24537173,24533054,24529770,24528041	Gene ID= ENSG00000109606.12 TPM= 70.47 Transcript Type= protein_coding
chr4	24527475	24539150	24527475	24539150	-	ENST00000508032.5@DHX15	ENST00000508032.5	protein_coding	24537051,24532864,24529601,24527475	24539150,24533054,24529770,24528041	Gene ID= ENSG00000109606.12 TPM= 1.93 Transcript Type= processed_transcript
chr4	24795534	24800842	24795534	24800842	+	transcript904.chr4.nnic@SOD3	transcript904.chr4.nnic	protein_coding	24795534,24799506,24800619	24795651,24800528,24800842	Gene ID= ENSG00000109610.5 TPM= 2.9 Transcript Type= NA
chr4	24795463	24800842	24795463	24800842	+	ENST00000382120.3@SOD3	ENST00000382120.3	protein_coding	24795463,24799506	24795651,24800842	Gene ID= ENSG00000109610.5 TPM= 4.83 Transcript Type= protein_coding
chr4	24803515	24805178	24803515	24805178	-	transcript906.chr4.nnic@NA	transcript906.chr4.nnic	NA	24803515	24805178	Gene ID= novel_gene_chr4_907 TPM= 2.9 Transcript Type= NA
chr4	25120014	25160442	25120014	25160442	-	ENST00000382103.6@SEPSECS	ENST00000382103.6	protein_coding	25160256,25158953,25156856,25156037,25154998,25151960,25145004,25144774,25127264,25125694,25120014	25160442,25159107,25156974,25156195,25155151,25152062,25145133,25144865,25127357,25125784,25124225	Gene ID= ENSG00000109618.11 TPM= 1.93 Transcript Type= protein_coding
chr4	25233975	25279092	25233975	25279092	+	ENST00000264864.7@PI4K2B	ENST00000264864.7	protein_coding	25233975,25252321,25255065,25256543,25259037,25260524,25263750,25268443,25269144,25277014	25234431,25252475,25255265,25256674,25259190,25260591,25263849,25268576,25269203,25279092	Gene ID= ENSG00000038210.12 TPM= 6.76 Transcript Type= protein_coding
chr4	25312774	25370026	25312774	25370026	+	transcript919.chr4.nic@ZCCHC4	transcript919.chr4.nic	protein_coding	25312774,25314046,25315318,25333183,25333908,25345548,25349492,25351589,25361859,25362226,25364454,25365022,25369029	25312936,25314164,25315400,25333458,25333988,25345620,25349642,25351689,25361980,25362301,25364505,25365072,25370026	Gene ID= ENSG00000168228.14 TPM= 2.9 Transcript Type= NA
chr4	25312774	25370044	25312774	25370044	+	transcript922.chr4.nnic@ZCCHC4	transcript922.chr4.nnic	protein_coding	25312774,25314046,25315318,25333183,25333908,25345548,25349492,25351589,25361859,25362226,25364454,25369029	25312936,25314164,25315400,25333458,25333988,25345620,25349642,25351689,25361980,25362301,25364505,25370044	Gene ID= ENSG00000168228.14 TPM= 1.93 Transcript Type= NA
chr4	25377254	25418489	25377254	25418489	+	transcript930.chr4.nnic@ANAPC4	transcript930.chr4.nnic	protein_coding	25377254,25377418,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392338,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415466,25416425,25417616,25418155	25377344,25377556,25380479,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418489	Gene ID= ENSG00000053900.10 TPM= 3.86 Transcript Type= NA
chr4	25914204	25929812	25914204	25929812	+	ENST00000506197.2@SMIM20	ENST00000506197.2	protein_coding	25914204,25928313,25929154	25914422,25928369,25929812	Gene ID= ENSG00000250317.8 TPM= 64.68 Transcript Type= protein_coding
chr4	26320807	26435128	26320807	26435128	+	ENST00000355476.7@RBPJ	ENST00000355476.7	protein_coding	26320807,26362446,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430419,26430692	26321048,26362628,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430053,26430522,26435128	Gene ID= ENSG00000168214.20 TPM= 3.86 Transcript Type= protein_coding
chr4	26320800	26431066	26320800	26431066	+	ENST00000348160.8@RBPJ	ENST00000348160.8	protein_coding	26320800,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430419,26430692	26321048,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430053,26430522,26431066	Gene ID= ENSG00000168214.20 TPM= 2.9 Transcript Type= protein_coding
chr4	26583916	26755351	26583916	26755351	+	ENST00000264866.8@TBC1D19	ENST00000264866.8	protein_coding	26583916,26613169,26614408,26620613,26637211,26638771,26640141,26659597,26666333,26672149,26673776,26683675,26688345,26717933,26720081,26735455,26739864,26742508,26748411,26753820,26754873	26584292,26613241,26614453,26620688,26637285,26638834,26640187,26659707,26666405,26672187,26673888,26683749,26688407,26718017,26720125,26735487,26739973,26742599,26748526,26753890,26755351	Gene ID= ENSG00000109680.10 TPM= 1.93 Transcript Type= protein_coding
chr4	26787927	26790202	26787927	26790202	+	transcript954.chr4.nnic@NA	transcript954.chr4.nnic	NA	26787927,26788522	26788149,26790202	Gene ID= novel_gene_chr4_955 TPM= 1.93 Transcript Type= NA
chr4	26860691	27025381	26860691	27025381	+	ENST00000467087.5@STIM2	ENST00000467087.5	protein_coding	26860691,26919504,26957612,26995379,26999232,27002217,27002927,27007533,27008428,27008764,27017711,27022519	26861369,26919634,26957726,26995490,26999347,27002394,27003104,27007700,27008528,27009002,27017984,27025381	Gene ID= ENSG00000109689.15 TPM= 5.79 Transcript Type= protein_coding
chr4	37826633	37862937	37826633	37862937	+	ENST00000381967.8@PGM2	ENST00000381967.8	protein_coding	37826633,37829964,37834618,37837529,37839848,37840066,37844364,37845633,37846931,37847202,37848522,37850184,37855608,37861510	37826813,37830131,37834724,37837613,37839931,37840259,37844553,37845730,37847111,37847295,37848651,37850373,37855741,37862937	Gene ID= ENSG00000169299.13 TPM= 2.9 Transcript Type= protein_coding
chr4	37890888	38137619	37890888	38137619	+	transcript972.chr4.nic@TBC1D1	transcript972.chr4.nic	protein_coding	37890888,37902003,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38051899,38053106,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37891348,37902512,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38052060,38053225,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 21.91 Transcript Type= NA
chr4	37890921	38137619	37890921	38137619	+	transcript979.chr4.nic@TBC1D1	transcript979.chr4.nic	protein_coding	37890921,37902003,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38053106,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37891348,37902512,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38053225,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 15.96 Transcript Type= NA
chr4	37977365	38137619	37977365	38137619	+	transcript981.chr4.nnic@TBC1D1	transcript981.chr4.nnic	protein_coding	37977365,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38051899,38053106,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049859,38052060,38053225,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 10.78 Transcript Type= NA
chr4	37977292	38137619	37977292	38137619	+	transcript983.chr4.nic@TBC1D1	transcript983.chr4.nic	protein_coding	37977292,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38051899,38053106,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38052060,38053225,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 24.01 Transcript Type= NA
chr4	37977355	38137619	37977355	38137619	+	transcript986.chr4.nic@TBC1D1	transcript986.chr4.nic	protein_coding	37977355,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38053106,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38053225,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 10.33 Transcript Type= NA
chr4	37977292	38137619	37977292	38137619	+	transcript989.chr4.nic@TBC1D1	transcript989.chr4.nic	protein_coding	37977292,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 13.22 Transcript Type= NA
chr4	37891099	37952812	37891099	37952812	+	ENST00000402522.1@TBC1D1	ENST00000402522.1	protein_coding	37891099,37902003,37952006	37891348,37902512,37952812	Gene ID= ENSG00000065882.15 TPM= 2.9 Transcript Type= protein_coding
chr4	38662909	38663751	38662909	38663751	-	transcript1012.chr4.nnic@NA	transcript1012.chr4.nnic	NA	38662909	38663751	Gene ID= novel_gene_chr4_1013 TPM= 2.9 Transcript Type= NA
chr4	38867761	38945739	38867761	38945739	+	transcript1016.chr4.nic@FAM114A1	transcript1016.chr4.nic	protein_coding	38867761,38878071,38891743,38905522,38905755,38908592,38914921,38922770,38929242,38931451,38932235,38935718,38940968,38943456	38867834,38878426,38891830,38905635,38905861,38908726,38915073,38922893,38929333,38931612,38932374,38935790,38941021,38945739	Gene ID= ENSG00000197712.11 TPM= 10.14 Transcript Type= NA
chr4	38867816	38945739	38867816	38945739	+	ENST00000358869.4@FAM114A1	ENST00000358869.4	protein_coding	38867816,38868398,38878071,38891743,38905522,38905755,38908592,38914921,38922770,38929242,38931451,38932235,38935718,38940968,38943456	38867834,38868546,38878426,38891830,38905635,38905861,38908726,38915073,38922893,38929333,38931612,38932374,38935790,38941021,38945739	Gene ID= ENSG00000197712.11 TPM= 9.17 Transcript Type= protein_coding
chr4	39044676	39133938	39044676	39133938	+	transcript1024.chr4.nnic@KLHL5	transcript1024.chr4.nnic	protein_coding	39044676,39075965,39081103,39081963,39086515,39096692,39103287,39107569,39113020,39115159,39126694,39133921	39045096,39076147,39081239,39082159,39086727,39096878,39103511,39107731,39113232,39115330,39126857,39133938	Gene ID= ENSG00000109790.16 TPM= 3.86 Transcript Type= NA
chr4	39045060	39122208	39045060	39122208	+	ENST00000508137.6@KLHL5	ENST00000508137.6	protein_coding	39045060,39075965,39081103,39081963,39086515,39096692,39103287,39107569,39113020,39115159,39121010	39045096,39076147,39081239,39082159,39086727,39096878,39103511,39107731,39113232,39115330,39122208	Gene ID= ENSG00000109790.16 TPM= 3.86 Transcript Type= protein_coding
chr4	39182404	39285810	39182404	39285810	+	ENST00000399820.7@WDR19	ENST00000399820.7	protein_coding	39182404,39185726,39186539,39189656,39194544,39199478,39203642,39205154,39205563,39214601,39215841,39216096,39217134,39217983,39224884,39228210,39228486,39231797,39232162,39234766,39240277,39244248,39244470,39245369,39253146,39253906,39255848,39257486,39266063,39267995,39269976,39272980,39274808,39277020,39278131,39278539,39285487	39182563,39185817,39186604,39189781,39194659,39199593,39203722,39205266,39205736,39214671,39216013,39216210,39217240,39218105,39225033,39228357,39228690,39231956,39232272,39234875,39240334,39244388,39244552,39245452,39253292,39254030,39255960,39257554,39266140,39268091,39270100,39273061,39274958,39277143,39278207,39278663,39285810	Gene ID= ENSG00000157796.17 TPM= 1.93 Transcript Type= protein_coding
chr4	39308992	39366384	39308992	39366384	-	transcript1051.chr4.nic@RFC1	transcript1051.chr4.nic	protein_coding	39366239,39351348,39345401,39342345,39327524,39326563,39323340,39321287,39320383,39316915,39312752,39311445,39308992	39366384,39351476,39345476,39342467,39327756,39326640,39323417,39321374,39320669,39317022,39312931,39311549,39309032	Gene ID= ENSG00000035928.15 TPM= 3.86 Transcript Type= NA
chr4	39287456	39366375	39287456	39366375	-	ENST00000381897.5@RFC1	ENST00000381897.5	protein_coding	39366239,39351348,39345401,39342345,39327524,39326563,39323340,39321287,39320383,39316915,39312752,39311445,39308636,39306592,39304814,39303060,39302737,39302500,39302278,39300260,39300021,39295614,39291639,39289848,39287456	39366375,39351476,39345476,39342467,39327756,39326640,39323417,39321374,39320669,39317022,39312931,39311549,39309032,39306704,39304928,39303151,39302874,39302595,39302376,39300414,39300138,39295759,39291852,39290039,39288844	Gene ID= ENSG00000035928.15 TPM= 2.41 Transcript Type= protein_coding
chr4	39287456	39366351	39287456	39366351	-	ENST00000349703.6@RFC1	ENST00000349703.6	protein_coding	39366239,39351348,39345401,39342345,39327524,39326563,39323340,39321287,39320383,39316915,39312752,39311445,39308636,39306592,39304814,39303060,39302737,39302500,39302278,39300260,39300021,39295614,39291639,39289848,39287456	39366351,39351476,39345476,39342467,39327756,39326640,39323417,39321374,39320669,39317022,39312931,39311549,39309032,39306701,39304928,39303151,39302874,39302595,39302376,39300414,39300138,39295759,39291852,39290039,39288844	Gene ID= ENSG00000035928.15 TPM= 1.45 Transcript Type= protein_coding
chr4	39454124	39458948	39454124	39458948	-	ENST00000295955.13@RPL9	ENST00000295955.13	protein_coding	39458891,39458394,39458194,39457586,39456406,39454864,39454533,39454124	39458948,39458440,39458309,39457681,39456538,39454944,39454649,39454225	Gene ID= ENSG00000163682.15 TPM= 289.27 Transcript Type= protein_coding
chr4	39454124	39458935	39454124	39458935	-	transcript1056.chr4.nic@RPL9	transcript1056.chr4.nic	protein_coding	39458891,39458394,39458194,39457586,39456406,39454864,39454533,39454124	39458935,39458598,39458309,39457681,39456538,39454944,39454649,39454225	Gene ID= ENSG00000163682.15 TPM= 35.4 Transcript Type= NA
chr4	39454137	39458888	39454137	39458888	-	ENST00000449470.6@RPL9	ENST00000449470.6	protein_coding	39458394,39458194,39457586,39456406,39454864,39454533,39454137	39458888,39458309,39457681,39456538,39454944,39454649,39454225	Gene ID= ENSG00000163682.15 TPM= 21.88 Transcript Type= protein_coding
chr4	39458587	39479506	39458587	39479506	+	ENST00000640888.1@LIAS	ENST00000640888.1	protein_coding	39458587,39460790,39462196,39463525,39465046,39465285,39467518,39470019,39471236,39473100,39477063	39459162,39460962,39462289,39463605,39465202,39465342,39467646,39470164,39471306,39473211,39479506	Gene ID= ENSG00000121897.14 TPM= 10.62 Transcript Type= protein_coding
chr4	39498755	39527618	39498755	39527618	-	ENST00000316423.10@UGDH	ENST00000316423.10	protein_coding	39527283,39521351,39514083,39510661,39510353,39509760,39508566,39505618,39505237,39504417,39503875,39498755	39527618,39521519,39514184,39510861,39510550,39509907,39508660,39505748,39505370,39504508,39503985,39500253	Gene ID= ENSG00000109814.11 TPM= 12.55 Transcript Type= protein_coding
chr4	39698044	39782792	39698044	39782792	+	ENST00000261427.9@UBE2K	ENST00000261427.9	protein_coding	39698044,39737420,39745752,39755657,39774834,39777682,39778360	39698390,39737513,39745810,39755739,39774933,39777810,39782792	Gene ID= ENSG00000078140.13 TPM= 16.41 Transcript Type= protein_coding
chr4	39826456	39977631	39826456	39977631	-	transcript1096.chr4.nnic@PDS5A	transcript1096.chr4.nnic	protein_coding	39977457,39976440,39927961,39926775,39925836,39922622,39920319,39917048,39913611,39910244,39908395,39904040,39902347,39900426,39898777,39898389,39890249,39879728,39876993,39874289,39872986,39869394,39866861,39863336,39862869,39862219,39849520,39848851,39845818,39844656,39841948,39837856,39826456	39977631,39976617,39928164,39926861,39925933,39922748,39920399,39917188,39913726,39910338,39908540,39904191,39902460,39900507,39898825,39898528,39890364,39879833,39877153,39874412,39873144,39869462,39866997,39863459,39863073,39862333,39849652,39848970,39845880,39844801,39842056,39838208,39826847	Gene ID= ENSG00000121892.14 TPM= 2.9 Transcript Type= NA
chr4	39908188	39977932	39908188	39977932	-	transcript1105.chr4.nic@PDS5A	transcript1105.chr4.nic	protein_coding	39977457,39976440,39927961,39926775,39925836,39922622,39920319,39917048,39913611,39910244,39908188	39977932,39976617,39928164,39926861,39925933,39922748,39920399,39917188,39913726,39910338,39908540	Gene ID= ENSG00000121892.14 TPM= 6.76 Transcript Type= NA
chr4	39898014	39977956	39898014	39977956	-	ENST00000503396.5@PDS5A	ENST00000503396.5	protein_coding	39977457,39976440,39927961,39926775,39925836,39922622,39920319,39917048,39913611,39910244,39908395,39904040,39902347,39900426,39898777,39898014	39977956,39976617,39928164,39926861,39925933,39922748,39920399,39917188,39913726,39910338,39908540,39904191,39902460,39900507,39898825,39898528	Gene ID= ENSG00000121892.14 TPM= 38.61 Transcript Type= protein_coding
chr4	41048777	41050139	41048777	41050139	+	transcript1110.chr4.nnic@NA	transcript1110.chr4.nnic	NA	41048777	41050139	Gene ID= novel_gene_chr4_1111 TPM= 5.79 Transcript Type= NA
chr4	41256833	41268429	41256833	41268429	+	ENST00000284440.8@UCHL1	ENST00000284440.8	protein_coding	41256833,41257115,41257609,41260647,41261715,41261876,41263225,41264103,41267987	41257009,41257126,41257737,41260797,41261800,41261923,41263291,41264161,41268429	Gene ID= ENSG00000154277.12 TPM= 5.31 Transcript Type= protein_coding
chr4	41256908	41268428	41256908	41268428	+	ENST00000381760.8@UCHL1	ENST00000381760.8	protein_coding	41256908,41257115,41260647,41261715,41261876,41263225,41264103,41267987	41257009,41257737,41260797,41261800,41261923,41263291,41264161,41268428	Gene ID= ENSG00000154277.12 TPM= 6.27 Transcript Type= retained_intron
chr4	41360734	41699000	41360734	41699000	+	transcript1116.chr4.nic@LIMCH1	transcript1116.chr4.nic	protein_coding	41360734,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41620424,41626708,41629492,41631148,41632749,41632977,41633548,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41687840,41689527,41692282,41697160	41360936,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41620690,41627010,41629734,41631477,41632867,41633085,41633808,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41687917,41689635,41692384,41699000	Gene ID= ENSG00000064042.17 TPM= 14.29 Transcript Type= NA
chr4	41360622	41699000	41360622	41699000	+	transcript1119.chr4.nic@LIMCH1	transcript1119.chr4.nic	protein_coding	41360622,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41620424,41626708,41629492,41631148,41632749,41632977,41633548,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160	41360936,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41620690,41627010,41629734,41631477,41632867,41633085,41633808,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41699000	Gene ID= ENSG00000064042.17 TPM= 13.16 Transcript Type= NA
chr4	41538183	41699000	41538183	41699000	+	transcript1147.chr4.nic@LIMCH1	transcript1147.chr4.nic	protein_coding	41538183,41598920,41603875,41605894,41613466,41619188,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41687840,41689527,41692282,41697160	41538350,41599026,41603905,41606004,41613661,41619440,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41687917,41689635,41692384,41699000	Gene ID= ENSG00000064042.17 TPM= 13.15 Transcript Type= NA
chr4	41538157	41697814	41538157	41697814	+	ENST00000503057.5@LIMCH1	ENST00000503057.5	protein_coding	41538157,41598920,41603875,41605894,41613466,41619188,41620424,41626708,41629492,41631148,41632749,41632977,41633548,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41687840,41689527,41692282,41697160	41538350,41599026,41603905,41606004,41613661,41619440,41620690,41627010,41629734,41631477,41632867,41633085,41633808,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41687917,41689635,41692384,41697814	Gene ID= ENSG00000064042.17 TPM= 3.25 Transcript Type= protein_coding
chr4	41360562	41646174	41360562	41646174	+	transcript1172.chr4.nic@LIMCH1	transcript1172.chr4.nic	protein_coding	41360562,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41638932,41644500,41646123	41360936,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41638967,41644626,41646174	Gene ID= ENSG00000064042.17 TPM= 15.64 Transcript Type= NA
chr4	41990499	42098389	41990499	42098389	+	transcript1189.chr4.nnic@SLC30A9	transcript1189.chr4.nnic	protein_coding	41990499,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212,42086082,42098042	41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078325,42086570,42098389	Gene ID= ENSG00000014824.13 TPM= 2.9 Transcript Type= NA
chr4	41990472	42090457	41990472	42090457	+	ENST00000264451.11@SLC30A9	ENST00000264451.11	protein_coding	41990472,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212,42086082	41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078325,42090457	Gene ID= ENSG00000014824.13 TPM= 49.23 Transcript Type= protein_coding
chr4	41990499	42078909	41990499	42078909	+	transcript1192.chr4.nic@SLC30A9	transcript1192.chr4.nic	protein_coding	41990499,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212	41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078909	Gene ID= ENSG00000014824.13 TPM= 6.76 Transcript Type= NA
chr4	44447871	44449591	44447871	44449591	+	transcript1202.chr4.nnic@NA	transcript1202.chr4.nnic	NA	44447871	44449591	Gene ID= novel_gene_chr4_1203 TPM= 2.9 Transcript Type= NA
chr4	44622065	44651628	44622065	44651628	-	ENST00000415895.8@YIPF7	ENST00000415895.8	protein_coding	44651554,44649985,44635922,44629403,44624601,44622065	44651628,44650101,44636085,44629548,44624782,44622576	Gene ID= ENSG00000177752.14 TPM= 1.93 Transcript Type= protein_coding
chr4	47450796	47463719	47450796	47463719	-	ENST00000381571.5@COMMD8	ENST00000381571.5	protein_coding	47463586,47460144,47456577,47453059,47450796	47463719,47460299,47456729,47453214,47451665	Gene ID= ENSG00000169019.10 TPM= 6.76 Transcript Type= protein_coding
chr4	47847240	47914616	47847240	47914616	-	ENST00000381538.7@NFXL1	ENST00000381538.7	protein_coding	47914550,47913969,47910824,47905237,47903193,47899370,47898959,47898757,47897967,47896523,47894180,47890613,47885879,47885498,47884346,47879096,47878525,47875127,47862846,47855059,47851856,47851095,47847240	47914616,47914205,47910994,47905346,47903323,47899548,47899120,47898857,47898081,47896647,47894302,47890703,47885999,47885657,47884437,47879117,47878665,47875293,47862915,47855163,47851942,47851148,47848336	Gene ID= ENSG00000170448.11 TPM= 1.93 Transcript Type= protein_coding
chr4	48341397	48425015	48341397	48425015	+	transcript1238.chr4.nic@SLAIN2	transcript1238.chr4.nic	protein_coding	48341397,48369849,48377896,48379690,48382568,48383647,48394576,48420125,48422011	48342128,48369997,48378060,48379848,48382927,48383784,48394653,48420443,48425015	Gene ID= ENSG00000109171.14 TPM= 14.19 Transcript Type= NA
chr4	48341322	48426212	48341322	48426212	+	ENST00000264313.10@SLAIN2	ENST00000264313.10	protein_coding	48341322,48369849,48377896,48379690,48382568,48383647,48420125,48422011	48342128,48369997,48378060,48379848,48382927,48383784,48420443,48426212	Gene ID= ENSG00000109171.14 TPM= 5.02 Transcript Type= protein_coding
chr4	48831027	48861200	48831027	48861200	+	transcript1252.chr4.nic@OCIAD1	transcript1252.chr4.nic	protein_coding	48831027,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48831052,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861200	Gene ID= ENSG00000109180.14 TPM= 2.9 Transcript Type= NA
chr4	48831065	48861248	48831065	48861248	+	ENST00000264312.11@OCIAD1	ENST00000264312.11	protein_coding	48831065,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48831249,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861248	Gene ID= ENSG00000109180.14 TPM= 52.61 Transcript Type= protein_coding
chr4	48831084	48861200	48831084	48861200	+	ENST00000381473.7@OCIAD1	ENST00000381473.7	protein_coding	48831084,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48831496,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861200	Gene ID= ENSG00000109180.14 TPM= 1.93 Transcript Type= protein_coding
chr4	48831342	48861250	48831342	48861250	+	ENST00000513391.2@OCIAD1	ENST00000513391.2	protein_coding	48831342,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48831398,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861250	Gene ID= ENSG00000109180.14 TPM= 10.14 Transcript Type= protein_coding
chr4	48858082	48861259	48858082	48861259	+	transcript1266.chr4.nnic@NA	transcript1266.chr4.nnic	NA	48858082	48861259	Gene ID= novel_gene_chr4_1267 TPM= 1.93 Transcript Type= NA
chr4	52020706	52038316	52020706	52038316	-	transcript1298.chr4.nic@SGCB	transcript1298.chr4.nic	protein_coding	52038227,52033431,52031852,52029678,52028730,52027968,52020706	52038316,52033640,52031961,52029863,52028921,52028099,52024160	Gene ID= ENSG00000163069.12 TPM= 27.83 Transcript Type= NA
chr4	52020706	52038482	52020706	52038482	-	ENST00000381431.9@SGCB	ENST00000381431.9	protein_coding	52038227,52033431,52029678,52028730,52027968,52020706	52038482,52033640,52029863,52028921,52028099,52024160	Gene ID= ENSG00000163069.12 TPM= 91.54 Transcript Type= protein_coding
chr4	52712404	52714137	52712404	52714137	+	ENST00000411630.6@DANCR	ENST00000411630.6	processed_transcript	52712404,52712824,52713494	52712527,52712959,52714137	Gene ID= ENSG00000226950.6 TPM= 75.29 Transcript Type= lincRNA
chr4	53377628	53459402	53377628	53459402	+	transcript1344.chr4.nic@FIP1L1	transcript1344.chr4.nic	protein_coding	53377628,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459402	Gene ID= ENSG00000145216.15 TPM= 1.93 Transcript Type= NA
chr4	53377628	53459618	53377628	53459618	+	transcript1349.chr4.nic@FIP1L1	transcript1349.chr4.nic	protein_coding	53377628,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459618	Gene ID= ENSG00000145216.15 TPM= 2.41 Transcript Type= NA
chr4	53377628	53459668	53377628	53459668	+	transcript1356.chr4.nic@FIP1L1	transcript1356.chr4.nic	protein_coding	53377628,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53425872,53428027,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53425965,53428183,53442707,53444103,53453133,53458790,53459668	Gene ID= ENSG00000145216.15 TPM= 4.96 Transcript Type= NA
chr4	53377628	53459618	53377628	53459618	+	transcript1357.chr4.nic@FIP1L1	transcript1357.chr4.nic	protein_coding	53377628,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53414615,53425872,53428027,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53414722,53425965,53428183,53442707,53444103,53453133,53458790,53459618	Gene ID= ENSG00000145216.15 TPM= 4.48 Transcript Type= NA
chr4	53377628	53459668	53377628	53459668	+	transcript1363.chr4.nic@FIP1L1	transcript1363.chr4.nic	protein_coding	53377628,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53425872,53428027,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53425965,53428183,53442707,53444103,53453133,53458790,53459668	Gene ID= ENSG00000145216.15 TPM= 3.03 Transcript Type= NA
chr4	53377636	53459618	53377636	53459618	+	transcript1364.chr4.nic@FIP1L1	transcript1364.chr4.nic	protein_coding	53377636,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53425872,53428027,53442653,53444048,53452920,53458653,53459302	53377923,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53425965,53428183,53442707,53444103,53453133,53458790,53459618	Gene ID= ENSG00000145216.15 TPM= 2.55 Transcript Type= NA
chr4	53377645	53459668	53377645	53459668	+	ENST00000337488.10@FIP1L1	ENST00000337488.10	protein_coding	53377645,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53414615,53425872,53428027,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53414722,53425965,53428183,53442707,53444103,53453133,53458790,53459668	Gene ID= ENSG00000145216.15 TPM= 4.96 Transcript Type= protein_coding
chr4	53377645	53459668	53377645	53459668	+	ENST00000358575.9@FIP1L1	ENST00000358575.9	protein_coding	53377645,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459668	Gene ID= ENSG00000145216.15 TPM= 1.93 Transcript Type= protein_coding
chr4	53377696	53459621	53377696	53459621	+	ENST00000306932.10@FIP1L1	ENST00000306932.10	protein_coding	53377696,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53425872,53428027,53442653,53444048,53452920,53458653,53459302	53377923,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53425965,53428183,53442707,53444103,53453133,53458790,53459621	Gene ID= ENSG00000145216.15 TPM= 1.1 Transcript Type= protein_coding
chr4	54009789	54064690	54009789	54064690	-	ENST00000263921.7@CHIC2	ENST00000263921.7	protein_coding	54064182,54049251,54048955,54014063,54013837,54009789	54064690,54049305,54049110,54014119,54013896,54010145	Gene ID= ENSG00000109220.10 TPM= 12.55 Transcript Type= protein_coding
chr4	54229097	54298247	54229097	54298247	+	ENST00000257290.9@PDGFRA	ENST00000257290.9	protein_coding	54229097,54258757,54261095,54263667,54264919,54267289,54267552,54270633,54272394,54273537,54274531,54274841,54277388,54277896,54278362,54280316,54285371,54285841,54287430,54288799,54289009,54290313,54295125	54229415,54258817,54261412,54263927,54265049,54267460,54267741,54270748,54272520,54273730,54274625,54274973,54277492,54278006,54278515,54280482,54285486,54285963,54287541,54288898,54289114,54290554,54298247	Gene ID= ENSG00000134853.11 TPM= 11.58 Transcript Type= protein_coding
chr4	54657918	54740715	54657918	54740715	+	ENST00000288135.5@KIT	ENST00000288135.5	protein_coding	54657918,54695512,54698284,54699630,54703724,54707098,54709424,54723584,54725857,54727218,54727416,54727823,54728011,54729335,54731328,54731871,54733070,54736498,54736721,54737175,54738429	54658081,54695781,54698565,54699766,54703892,54707287,54709539,54723698,54726050,54727324,54727542,54727927,54728121,54729485,54731419,54731998,54733192,54736609,54736820,54737280,54740715	Gene ID= ENSG00000157404.15 TPM= 1.93 Transcript Type= protein_coding
chr4	55346109	55373096	55346109	55373096	+	ENST00000264228.8@SRD5A3	ENST00000264228.8	protein_coding	55346109,55359346,55364074,55367588,55369832	55346557,55359488,55364271,55367722,55373096	Gene ID= ENSG00000128039.10 TPM= 8.69 Transcript Type= protein_coding
chr4	55395957	55426172	55395957	55426172	+	transcript1398.chr4.nnic@TMEM165	transcript1398.chr4.nnic	protein_coding	55395957,55417072,55417803,55424538,55425376	55396396,55417247,55417985,55424643,55426172	Gene ID= ENSG00000134851.12 TPM= 2.41 Transcript Type= NA
chr4	55395957	55426172	55395957	55426172	+	ENST00000381334.9@TMEM165	ENST00000381334.9	protein_coding	55395957,55411614,55417072,55417803,55424538,55425376	55396396,55411839,55417247,55417985,55424643,55426172	Gene ID= ENSG00000134851.12 TPM= 30.41 Transcript Type= protein_coding
chr4	55853660	55905013	55853660	55905013	+	transcript1404.chr4.nnic@EXOC1	transcript1404.chr4.nnic	protein_coding	55853660,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55872755,55877917,55883823,55884848,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853953,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55872808,55878066,55883928,55884871,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905013	Gene ID= ENSG00000090989.17 TPM= 4.18 Transcript Type= NA
chr4	55853648	55905013	55853648	55905013	+	transcript1405.chr4.nnic@EXOC1	transcript1405.chr4.nnic	protein_coding	55853648,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55872755,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853797,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55872808,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905013	Gene ID= ENSG00000090989.17 TPM= 12.38 Transcript Type= NA
chr4	56338290	56387500	56338290	56387500	-	ENST00000205214.10@AASDH	ENST00000205214.10	protein_coding	56387362,56384070,56382477,56378148,56371451,56355182,56354705,56354039,56353404,56351342,56349263,56345127,56343562,56342835,56338290	56387500,56384341,56382597,56378464,56371643,56355423,56354811,56354211,56353596,56351457,56350058,56345290,56343684,56342966,56338791	Gene ID= ENSG00000157426.13 TPM= 2.9 Transcript Type= protein_coding
chr4	56348928	56387500	56348928	56387500	-	ENST00000502617.1@AASDH	ENST00000502617.1	protein_coding	56387362,56384070,56382477,56378148,56371451,56355182,56354705,56354039,56353404,56351342,56348928	56387500,56384341,56382597,56378464,56371643,56355423,56354811,56354211,56353596,56351457,56350058	Gene ID= ENSG00000157426.13 TPM= 2.9 Transcript Type= protein_coding
chr4	56393362	56435615	56393362	56435615	-	ENST00000264220.6@PPAT	ENST00000264220.6	protein_coding	56435350,56407650,56406495,56403289,56403040,56402109,56401330,56400784,56399179,56396619,56393362	56435615,56407716,56406701,56403401,56403185,56402181,56401481,56400911,56399400,56396739,56395548	Gene ID= ENSG00000128059.8 TPM= 3.86 Transcript Type= protein_coding
chr4	56436138	56461361	56436138	56461361	+	ENST00000399688.7@PAICS	ENST00000399688.7	protein_coding	56436138,56441663,56446357,56446695,56448418,56448710,56450619,56451872,56453603,56459372	56436328,56441860,56446377,56446873,56448597,56448823,56450702,56452052,56453761,56461361	Gene ID= ENSG00000128050.8 TPM= 28.96 Transcript Type= protein_coding
chr4	56466915	56503107	56466915	56503107	+	ENST00000342756.9@SRP72	ENST00000342756.9	protein_coding	56466915,56469653,56471720,56474054,56474280,56476671,56478379,56478592,56483139,56484736,56486325,56487949,56489388,56490333,56490568,56491431,56495357,56500536,56501684	56467744,56469773,56471843,56474197,56474391,56476702,56478503,56478649,56483270,56484864,56486397,56488013,56489483,56490436,56490645,56491568,56495394,56500695,56503107	Gene ID= ENSG00000174780.15 TPM= 6.76 Transcript Type= protein_coding
chr4	56467618	56474508	56467618	56474508	+	ENST00000504757.2@SRP72	ENST00000504757.2	protein_coding	56467618,56469653,56471720,56474054,56474280	56467744,56469773,56471843,56474197,56474508	Gene ID= ENSG00000174780.15 TPM= 2.9 Transcript Type= protein_coding
chr4	56647998	56656304	56647998	56656304	-	ENST00000503639.7@HOPX	ENST00000503639.7	protein_coding	56655857,56647998	56656304,56648797	Gene ID= ENSG00000171476.21 TPM= 6.76 Transcript Type= protein_coding
chr4	56963370	56978823	56963370	56978823	-	ENST00000264230.4@NOA1	ENST00000264230.4	protein_coding	56976442,56973858,56973148,56968384,56966620,56964406,56963370	56978823,56974022,56973353,56968515,56966736,56964526,56963661	Gene ID= ENSG00000084092.6 TPM= 105.7 Transcript Type= protein_coding
chr4	56963370	56977625	56963370	56977625	-	transcript1463.chr4.nnic@NOA1	transcript1463.chr4.nnic	protein_coding	56976442,56973858,56973148,56968384,56964406,56963370	56977625,56974022,56973353,56968515,56964526,56963661	Gene ID= ENSG00000084092.6 TPM= 5.31 Transcript Type= NA
chr4	56977742	57031158	56977742	57031158	+	ENST00000381227.5@POLR2B	ENST00000381227.5	protein_coding	56977742,56978640,56986354,56990748,56994404,56994647,56995251,56999617,57005246,57005600,57006816,57010361,57010748,57010989,57015502,57017043,57017560,57020899,57022152,57023330,57023662,57024005,57024886,57025377,57030204,57030899	56977808,56979004,56986426,56990898,56994516,56994866,56995409,56999781,57005442,57005719,57007002,57010504,57010887,57011100,57015656,57017241,57017728,57020995,57022246,57023580,57023751,57024112,57024999,57025537,57030399,57031158	Gene ID= ENSG00000047315.15 TPM= 99.43 Transcript Type= protein_coding
chr4	57030773	57110385	57030773	57110385	-	ENST00000295666.6@IGFBP7	ENST00000295666.6	protein_coding	57109877,57040824,57033195,57032426,57030773	57110385,57040933,57033311,57032552,57031336	Gene ID= ENSG00000163453.11 TPM= 1.93 Transcript Type= protein_coding
chr4	64277702	64409462	64277702	64409462	-	ENST00000381210.7@TECRL	ENST00000381210.7	protein_coding	64409118,64375172,64328512,64322689,64314648,64309826,64305166,64299974,64289710,64281474,64281041,64277702	64409462,64375223,64328556,64322792,64314763,64309931,64305238,64300017,64289767,64281559,64281086,64280199	Gene ID= ENSG00000205678.7 TPM= 2.9 Transcript Type= protein_coding
chr4	67468748	67545606	67468748	67545606	-	ENST00000273853.10@CENPC	ENST00000273853.10	protein_coding	67545338,67544149,67540980,67539840,67530815,67519217,67518156,67514074,67512402,67508814,67506788,67505205,67495159,67493884,67492869,67492180,67489967,67474888,67468748	67545606,67544195,67541050,67539934,67530914,67519502,67518368,67514687,67512569,67509105,67506934,67505284,67495212,67493988,67492997,67492275,67490121,67474978,67472675	Gene ID= ENSG00000145241.10 TPM= 1.93 Transcript Type= protein_coding
chr4	67612652	67701179	67612652	67701179	-	ENST00000322244.9@UBA6	ENST00000322244.9	protein_coding	67701049,67696645,67682119,67681563,67678439,67677611,67673697,67670470,67668551,67665189,67663885,67663139,67662189,67649068,67646724,67645938,67644698,67641151,67638943,67635453,67634429,67634242,67633345,67631857,67631708,67630466,67629071,67626360,67624994,67624126,67623135,67622831,67612652	67701179,67696707,67682213,67681591,67678533,67677722,67673777,67670592,67668674,67665292,67663947,67663215,67662255,67649211,67646791,67646016,67644778,67641228,67639124,67635558,67634518,67634322,67633473,67631908,67631771,67630535,67629142,67626477,67625187,67624253,67623222,67622925,67619132	Gene ID= ENSG00000033178.12 TPM= 6.76 Transcript Type= protein_coding
chr4	68310387	68350089	68310387	68350089	-	ENST00000344157.8@YTHDC1	ENST00000344157.8	protein_coding	68349726,68338283,68337572,68337027,68333308,68332794,68332103,68330202,68330002,68324139,68322749,68320123,68318826,68318690,68318519,68316314,68310387	68350089,68338384,68337900,68337450,68333397,68332847,68332197,68330310,68330119,68324223,68322915,68320205,68318862,68318729,68318581,68316448,68314323	Gene ID= ENSG00000083896.12 TPM= 1.93 Transcript Type= protein_coding
chr4	70688479	70690551	70688479	70690551	+	ENST00000254803.3@UTP3	ENST00000254803.3	protein_coding	70688479	70690551	Gene ID= ENSG00000132467.3 TPM= 6.76 Transcript Type= protein_coding
chr4	70703963	70705696	70703963	70705696	-	transcript1532.chr4.nnic@NA	transcript1532.chr4.nnic	NA	70703963	70705696	Gene ID= novel_gene_chr4_1533 TPM= 7.72 Transcript Type= NA
chr4	70704707	70806868	70704707	70806868	+	transcript1512.chr4.nic@RUFY3	transcript1512.chr4.nic	protein_coding	70704707,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70793785,70794795,70800141,70802956,70804348,70806516	70705294,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70793904,70794894,70800205,70802983,70804416,70806868	Gene ID= ENSG00000018189.12 TPM= 5.79 Transcript Type= NA
chr4	70704793	70806868	70704793	70806868	+	transcript1513.chr4.nnic@RUFY3	transcript1513.chr4.nnic	protein_coding	70704793,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70793785,70794795,70800141,70802956,70804348,70806516	70705294,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70793904,70794894,70800205,70803059,70804416,70806868	Gene ID= ENSG00000018189.12 TPM= 1.93 Transcript Type= NA
chr4	70704775	70806868	70704775	70806868	+	transcript1515.chr4.nic@RUFY3	transcript1515.chr4.nic	protein_coding	70704775,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70800141,70802956,70804348,70806516	70705294,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70800205,70802983,70804416,70806868	Gene ID= ENSG00000018189.12 TPM= 2.9 Transcript Type= NA
chr4	70704808	70806868	70704808	70806868	+	transcript1520.chr4.nnic@RUFY3	transcript1520.chr4.nnic	protein_coding	70704808,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70800141,70802956,70804348,70806516	70705294,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70800205,70802983,70804416,70806868	Gene ID= ENSG00000018189.12 TPM= 1.93 Transcript Type= NA
chr4	70820375	70839343	70820375	70839343	-	ENST00000514161.5@GRSF1	ENST00000514161.5	protein_coding	70839177,70836158,70833118,70832307,70831539,70827852,70826124,70825296,70824294,70820375	70839343,70836314,70833273,70832450,70831674,70828036,70826245,70825431,70824368,70820861	Gene ID= ENSG00000132463.13 TPM= 3.86 Transcript Type= protein_coding
chr4	70815782	70839945	70815782	70839945	-	ENST00000254799.10@GRSF1	ENST00000254799.10	protein_coding	70839471,70836158,70833118,70832307,70831539,70827852,70826124,70825296,70824294,70815782	70839945,70836314,70833273,70832450,70831674,70828036,70826245,70825431,70824368,70820861	Gene ID= ENSG00000132463.13 TPM= 13.71 Transcript Type= protein_coding
chr4	70819531	70839897	70819531	70839897	-	ENST00000505068.5@GRSF1	ENST00000505068.5	protein_coding	70839471,70836158,70833118,70832307,70831539,70827852,70825296,70824294,70819531	70839897,70836314,70833273,70832450,70831674,70828036,70826245,70824368,70820861	Gene ID= ENSG00000132463.13 TPM= 4.54 Transcript Type= retained_intron
chr4	70902363	70988168	70902363	70988168	+	transcript1580.chr4.nnic@MOB1B	transcript1580.chr4.nnic	protein_coding	70902363,70958874,70969931,70975153,70979128,70980994,70981980	70902550,70959040,70970024,70975286,70979291,70981070,70988168	Gene ID= ENSG00000173542.8 TPM= 6.76 Transcript Type= NA
chr4	70993439	71030914	70993439	71030914	+	ENST00000286648.9@DCK	ENST00000286648.9	protein_coding	70993439,70998067,71022367,71023559,71025816,71026665,71029352	70993926,70998182,71022560,71023706,71025931,71026755,71030914	Gene ID= ENSG00000156136.9 TPM= 33.79 Transcript Type= protein_coding
chr4	73054548	73069651	73054548	73069651	-	transcript1587.chr4.nnic@COX18	transcript1587.chr4.nnic	protein_coding	73069317,73068029,73065250,73064778,73061813,73057966,73054548	73069651,73068129,73065413,73064885,73061920,73058287,73057166	Gene ID= ENSG00000163626.16 TPM= 1.93 Transcript Type= NA
chr4	73052362	73069741	73052362	73069741	-	ENST00000295890.8@COX18	ENST00000295890.8	protein_coding	73069317,73068029,73065250,73064778,73061813,73052362	73069741,73068129,73065413,73064899,73061920,73058287	Gene ID= ENSG00000163626.16 TPM= 1.93 Transcript Type= protein_coding
chr4	73102463	73223102	73102463	73223102	-	transcript1593.chr4.nnic@ANKRD17	transcript1593.chr4.nnic	protein_coding	73222974,73177380,73163302,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73139531,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102463	73223102,73177533,73163432,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73140283,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547	Gene ID= ENSG00000132466.18 TPM= 11.58 Transcript Type= NA
chr4	73075686	73223114	73075686	73223114	-	ENST00000509867.6@ANKRD17	ENST00000509867.6	protein_coding	73222974,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73139531,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102376,73098073,73097117,73094079,73090667,73085249,73078642,73077355,73076940,73075686	73223114,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73140283,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547,73098520,73097272,73094228,73092300,73085446,73078890,73077533,73077104,73076290	Gene ID= ENSG00000132466.18 TPM= 10.45 Transcript Type= protein_coding
chr4	73102463	73259149	73102463	73259149	-	transcript1598.chr4.nic@ANKRD17	transcript1598.chr4.nic	protein_coding	73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73139531,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102463	73259149,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73140283,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547	Gene ID= ENSG00000132466.18 TPM= 23.41 Transcript Type= NA
chr4	73102463	73223102	73102463	73223102	-	transcript1604.chr4.nic@ANKRD17	transcript1604.chr4.nic	protein_coding	73222974,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102463	73223102,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547	Gene ID= ENSG00000132466.18 TPM= 6.76 Transcript Type= NA
chr4	73102463	73258843	73102463	73258843	-	transcript1605.chr4.nic@ANKRD17	transcript1605.chr4.nic	protein_coding	73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102463	73258843,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547	Gene ID= ENSG00000132466.18 TPM= 7.96 Transcript Type= NA
chr4	73102499	73258798	73102499	73258798	-	transcript1608.chr4.nnic@ANKRD17	transcript1608.chr4.nnic	protein_coding	73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73139531,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73102499	73258798,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73140283,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73102547	Gene ID= ENSG00000132466.18 TPM= 3.14 Transcript Type= NA
chr4	73111804	73223102	73111804	73223102	-	transcript1610.chr4.nic@ANKRD17	transcript1610.chr4.nic	protein_coding	73222974,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73111804	73223102,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73113311	Gene ID= ENSG00000132466.18 TPM= 5.79 Transcript Type= NA
chr4	73102499	73258817	73102499	73258817	-	transcript1613.chr4.nnic@ANKRD17	transcript1613.chr4.nnic	protein_coding	73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73102499	73258817,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73102547	Gene ID= ENSG00000132466.18 TPM= 2.17 Transcript Type= NA
chr4	73073376	73258785	73073376	73258785	-	ENST00000358602.8@ANKRD17	ENST00000358602.8	protein_coding	73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73139531,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102376,73098073,73097117,73094079,73090667,73085249,73078642,73077355,73076940,73073376	73258785,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73140283,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547,73098520,73097272,73094228,73092300,73085446,73078890,73077533,73077104,73076290	Gene ID= ENSG00000132466.18 TPM= 4.66 Transcript Type= protein_coding
chr4	73869404	73871242	73869404	73871242	+	ENST00000395761.3@CXCL1	ENST00000395761.3	protein_coding	73869404,73869669,73869906,73870521	73869570,73869792,73869989,73871242	Gene ID= ENSG00000163739.4 TPM= 2.9 Transcript Type= protein_coding
chr4	74097035	74099293	74097035	74099293	-	ENST00000508487.2@CXCL2	ENST00000508487.2	protein_coding	74099021,74098799,74098601,74097035	74099293,74098922,74098684,74097771	Gene ID= ENSG00000081041.8 TPM= 1.93 Transcript Type= protein_coding
chr4	74158118	74303099	74158118	74303099	+	transcript1635.chr4.nic@MTHFD2L	transcript1635.chr4.nic	protein_coding	74158118,74160055,74174506,74175281,74199794,74201263,74225302,74281425,74301697	74158281,74160088,74174690,74175403,74199946,74201370,74225394,74281550,74303099	Gene ID= ENSG00000163738.18 TPM= 2.9 Transcript Type= NA
chr4	74158112	74303092	74158112	74303092	+	ENST00000395759.6@MTHFD2L	ENST00000395759.6	protein_coding	74158112,74174506,74175281,74199794,74201263,74225302,74281425,74301697	74158281,74174690,74175403,74199946,74201370,74225394,74281550,74303092	Gene ID= ENSG00000163738.18 TPM= 2.9 Transcript Type= protein_coding
chr4	74158118	74162253	74158118	74162253	+	ENST00000461101.1@MTHFD2L	ENST00000461101.1	protein_coding	74158118,74160055	74158281,74162253	Gene ID= ENSG00000163738.18 TPM= 5.79 Transcript Type= processed_transcript
chr4	74933116	75050113	74933116	75050113	+	ENST00000307428.7@PARM1	ENST00000307428.7	protein_coding	74933116,75012425,75033883,75046163	74933370,75013150,75033961,75050113	Gene ID= ENSG00000169116.11 TPM= 5.79 Transcript Type= protein_coding
chr4	75479037	75514685	75479037	75514685	-	ENST00000324439.9@RCHY1	ENST00000324439.9	protein_coding	75514197,75509177,75508820,75494101,75491889,75491724,75491611,75490581,75479037	75514685,75509296,75508935,75494179,75491933,75491782,75491637,75490701,75482666	Gene ID= ENSG00000163743.13 TPM= 3.86 Transcript Type= protein_coding
chr4	75482008	75514312	75482008	75514312	-	ENST00000505105.5@RCHY1	ENST00000505105.5	protein_coding	75514197,75509177,75508820,75494101,75491889,75491724,75491611,75490581,75482008	75514312,75509296,75508935,75494179,75491933,75491782,75491637,75490663,75482666	Gene ID= ENSG00000163743.13 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr4	75514447	75530026	75514447	75530026	+	transcript1667.chr4.nic@THAP6	transcript1667.chr4.nic	protein_coding	75514447,75516772,75521736,75526960	75514520,75516979,75521861,75530026	Gene ID= ENSG00000174796.12 TPM= 2.9 Transcript Type= NA
chr4	75514473	75530026	75514473	75530026	+	ENST00000311638.7@THAP6	ENST00000311638.7	protein_coding	75514473,75515433,75516772,75521736,75526960	75514520,75515532,75516979,75521861,75530026	Gene ID= ENSG00000174796.12 TPM= 3.86 Transcript Type= protein_coding
chr4	75642782	75673969	75642782	75673969	-	ENST00000359707.8@G3BP2	ENST00000359707.8	protein_coding	75673208,75661931,75658843,75657557,75656924,75655768,75655066,75653983,75648639,75647029,75646338,75642782	75673969,75662049,75658924,75657730,75657014,75655870,75655246,75654081,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 47.78 Transcript Type= protein_coding
chr4	75642782	75673114	75642782	75673114	-	ENST00000395719.7@G3BP2	ENST00000395719.7	protein_coding	75673019,75661931,75658843,75657557,75656924,75655768,75655066,75653983,75648639,75647029,75646338,75642782	75673114,75662049,75658924,75657730,75657014,75655870,75655246,75654081,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 7.24 Transcript Type= protein_coding
chr4	75644389	75673401	75644389	75673401	-	ENST00000357854.7@G3BP2	ENST00000357854.7	protein_coding	75673208,75661931,75658843,75657557,75656924,75655768,75655066,75648639,75647029,75646338,75644389	75673401,75662049,75658924,75657730,75657014,75655870,75655246,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 12.55 Transcript Type= protein_coding
chr4	75724577	75725406	75724577	75725406	+	transcript1730.chr4.nnic@NA	transcript1730.chr4.nnic	NA	75724577	75725406	Gene ID= novel_gene_chr4_1731 TPM= 4.83 Transcript Type= NA
chr4	75724598	75814286	75724598	75814286	+	ENST00000264904.8@USO1	ENST00000264904.8	protein_coding	75724598,75752373,75752540,75757497,75760594,75770439,75770822,75771082,75774676,75782680,75787062,75790150,75790643,75793690,75795336,75799622,75800351,75800618,75801079,75804134,75805140,75806486,75808953,75810432,75812160,75813206	75724885,75752459,75752604,75757573,75760605,75770539,75770924,75771137,75774796,75782858,75787202,75790238,75790797,75793901,75795356,75799732,75800469,75800799,75801200,75804272,75805303,75806572,75809051,75810539,75812375,75814286	Gene ID= ENSG00000138768.14 TPM= 35.72 Transcript Type= protein_coding
chr4	75724593	75814213	75724593	75814213	+	ENST00000514213.6@USO1	ENST00000514213.6	protein_coding	75724593,75752373,75752540,75757497,75770439,75770822,75771082,75774676,75782680,75787062,75790150,75790643,75793690,75799622,75800351,75800618,75801079,75804134,75805140,75806486,75808953,75810432,75812160,75813206	75724885,75752459,75752604,75757573,75770539,75770924,75771137,75774796,75782858,75787202,75790238,75790797,75793901,75799732,75800469,75800799,75801200,75804272,75805303,75806572,75809051,75810539,75812375,75814213	Gene ID= ENSG00000138768.14 TPM= 18.34 Transcript Type= protein_coding
chr4	75913657	75941051	75913657	75941051	-	ENST00000286733.8@NAAA	ENST00000286733.8	protein_coding	75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75914868,75913657	75941051,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75914985,75914338	Gene ID= ENSG00000138744.14 TPM= 5.79 Transcript Type= protein_coding
chr4	75934891	75940983	75934891	75940983	-	ENST00000507187.2@NAAA	ENST00000507187.2	protein_coding	75940744,75940001,75934891	75940983,75940165,75936235	Gene ID= ENSG00000138744.14 TPM= 2.9 Transcript Type= protein_coding
chr4	75949916	75990960	75949916	75990960	-	ENST00000356260.9@SDAD1	ENST00000356260.9	protein_coding	75990752,75981933,75981372,75977646,75975924,75975744,75974076,75973317,75971357,75970309,75969296,75967277,75965764,75964135,75961211,75961028,75960066,75957847,75957518,75957325,75955975,75949916	75990960,75982037,75981470,75977756,75975995,75975844,75974133,75973391,75971458,75970378,75969399,75967334,75965822,75964211,75961308,75961104,75960192,75957941,75957708,75957409,75956136,75950797	Gene ID= ENSG00000198301.11 TPM= 13.03 Transcript Type= protein_coding
chr4	75956066	75990960	75956066	75990960	-	transcript1748.chr4.nic@SDAD1	transcript1748.chr4.nic	protein_coding	75990752,75981933,75981372,75977646,75975924,75975744,75974076,75973317,75971357,75970309,75969296,75967277,75965764,75964135,75961211,75961028,75960066,75957847,75957518,75957325,75956066	75990960,75982037,75981545,75977756,75975995,75975844,75974133,75973391,75971458,75970378,75969399,75967334,75965822,75964211,75961308,75961104,75960192,75957941,75957708,75957409,75956136	Gene ID= ENSG00000198301.11 TPM= 1.93 Transcript Type= NA
chr4	75949906	75990938	75949906	75990938	-	ENST00000395710.5@SDAD1	ENST00000395710.5	protein_coding	75990752,75981933,75981372,75977646,75975924,75975744,75974076,75973317,75971357,75970309,75969296,75967277,75965764,75964135,75961211,75961028,75960066,75957847,75957518,75957325,75955975,75949906	75990938,75982037,75981545,75977756,75975995,75975844,75974133,75973391,75971458,75970378,75969399,75967334,75965822,75964211,75961308,75961104,75960192,75957941,75957708,75957409,75956136,75950797	Gene ID= ENSG00000198301.11 TPM= 2.41 Transcript Type= nonsense_mediated_decay
chr4	76074649	76112791	76074649	76112791	+	transcript1754.chr4.nic@ART3	transcript1754.chr4.nic	protein_coding	76074649,76075881,76081824,76097644,76098955,76100291,76100795,76100990,76103937,76104597,76105522,76107761,76112386	76074819,76075958,76082535,76097676,76098987,76100320,76100824,76101019,76103969,76104629,76105554,76107793,76112791	Gene ID= ENSG00000156219.16 TPM= 17.57 Transcript Type= NA
chr4	76074708	76112786	76074708	76112786	+	transcript1761.chr4.nnic@ART3	transcript1761.chr4.nnic	protein_coding	76074708,76075881,76081824,76097644,76098955,76100291,76100795,76100990,76103937,76104597,76112386	76074819,76075958,76082535,76097676,76098987,76100320,76100824,76101019,76103969,76104629,76112786	Gene ID= ENSG00000156219.16 TPM= 11.78 Transcript Type= NA
chr4	76074649	76112788	76074649	76112788	+	transcript1763.chr4.nic@ART3	transcript1763.chr4.nic	protein_coding	76074649,76075881,76081824,76097644,76098955,76100291,76100795,76100990,76103937,76111907,76112386	76074819,76075958,76082535,76097676,76098987,76100320,76100824,76101019,76103969,76111994,76112788	Gene ID= ENSG00000156219.16 TPM= 5.98 Transcript Type= NA
chr4	76074710	76112786	76074710	76112786	+	transcript1773.chr4.nnic@ART3	transcript1773.chr4.nnic	protein_coding	76074710,76075881,76081824,76097644,76098955,76100291,76100795,76100990,76112386	76074819,76075958,76082535,76097676,76098987,76100320,76100824,76101019,76112786	Gene ID= ENSG00000156219.16 TPM= 5.98 Transcript Type= NA
chr4	76074710	76112791	76074710	76112791	+	ENST00000355810.8@ART3	ENST00000355810.8	protein_coding	76074710,76075881,76081824,76097644,76098955,76100291,76100795,76100990,76103937,76104597,76107761,76112386	76074819,76075958,76082535,76097676,76098987,76100320,76100824,76101019,76103969,76104629,76107793,76112791	Gene ID= ENSG00000156219.16 TPM= 64.87 Transcript Type= protein_coding
chr4	76074710	76112791	76074710	76112791	+	ENST00000349321.7@ART3	ENST00000349321.7	protein_coding	76074710,76075881,76081824,76097644,76098955,76100291,76100795,76100990,76103937,76107761,76112386	76074819,76075958,76082535,76097676,76098987,76100320,76100824,76101019,76103969,76107793,76112791	Gene ID= ENSG00000156219.16 TPM= 10.81 Transcript Type= protein_coding
chr4	76105145	76108077	76105145	76108077	+	transcript1782.chr4.nnic@NA	transcript1782.chr4.nnic	NA	76105145	76108077	Gene ID= novel_gene_chr4_1783 TPM= 1.93 Transcript Type= NA
chr4	76114664	76148515	76114664	76148515	-	ENST00000264883.7@NUP54	ENST00000264883.7	protein_coding	76148308,76144390,76144149,76136186,76134175,76132523,76131230,76130656,76124649,76118075,76117664,76114664	76148515,76144473,76144292,76136412,76134362,76132719,76131284,76130749,76124756,76118194,76117774,76115494	Gene ID= ENSG00000138750.14 TPM= 10.62 Transcript Type= protein_coding
chr4	76114664	76148440	76114664	76148440	-	transcript1795.chr4.nic@NUP54	transcript1795.chr4.nic	protein_coding	76148308,76124649,76118075,76117664,76114664	76148440,76124756,76118194,76117774,76115494	Gene ID= ENSG00000138750.14 TPM= 1.93 Transcript Type= NA
chr4	76158733	76213918	76158733	76213918	-	ENST00000264896.7@SCARB2	ENST00000264896.7	protein_coding	76213427,76195707,76180954,76179517,76176437,76175791,76174144,76169867,76168403,76166250,76163225,76158733	76213918,76195864,76181101,76179705,76176528,76175910,76174313,76169985,76168476,76166301,76163383,76161751	Gene ID= ENSG00000138760.9 TPM= 47.3 Transcript Type= protein_coding
chr4	76251720	76311126	76251720	76311126	+	transcript1810.chr4.nic@FAM47E-STBD1	transcript1810.chr4.nic	protein_coding	76251720,76256178,76263704,76309144	76251820,76256523,76263843,76311126	Gene ID= ENSG00000272414.5 TPM= 2.9 Transcript Type= NA
chr4	76251727	76311130	76251727	76311130	+	transcript1811.chr4.nnic@FAM47E-STBD1	transcript1811.chr4.nnic	protein_coding	76251727,76263704,76271568,76309144	76251820,76263843,76271768,76311130	Gene ID= ENSG00000272414.5 TPM= 1.93 Transcript Type= NA
chr4	76306026	76311599	76306026	76311599	+	ENST00000237642.6@STBD1	ENST00000237642.6	protein_coding	76306026,76309144	76306989,76311599	Gene ID= ENSG00000118804.8 TPM= 426.67 Transcript Type= protein_coding
chr4	76949703	77038614	76949703	77038614	+	ENST00000264893.10@SEPT11	ENST00000264893.10	protein_coding	76949703,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783,77034497	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77030970,77038614	Gene ID= ENSG00000138758.11 TPM= 10.62 Transcript Type= protein_coding
chr4	76949815	77040155	76949815	77040155	+	transcript1825.chr4.nic@SEPT11	transcript1825.chr4.nic	protein_coding	76949815,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783,77039073	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77030970,77040155	Gene ID= ENSG00000138758.11 TPM= 1.93 Transcript Type= NA
chr4	76949751	77032158	76949751	77032158	+	ENST00000502584.5@SEPT11	ENST00000502584.5	protein_coding	76949751,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77032158	Gene ID= ENSG00000138758.11 TPM= 3.86 Transcript Type= protein_coding
chr4	77047158	77076005	77047158	77076005	-	ENST00000237654.8@CCNI	ENST00000237654.8	protein_coding	77075472,77066249,77058507,77056249,77055962,77055150,77047158	77076005,77066405,77058635,77056323,77056102,77055380,77048662	Gene ID= ENSG00000118816.9 TPM= 177.38 Transcript Type= protein_coding
chr4	77157151	77170059	77157151	77170059	+	ENST00000316355.9@CCNG2	ENST00000316355.9	protein_coding	77157151,77158533,77159367,77160721,77161480,77161649,77164274,77165801	77157506,77158670,77159504,77160971,77161558,77161747,77164479,77170059	Gene ID= ENSG00000138764.14 TPM= 1.93 Transcript Type= protein_coding
chr4	77862520	77952790	77862520	77952790	+	ENST00000315567.12@MRPL1	ENST00000315567.12	protein_coding	77862520,77871744,77883242,77885256,77887220,77894139,77909266,77949797,77952489	77862879,77871855,77883500,77885339,77887291,77894250,77909372,77949878,77952790	Gene ID= ENSG00000169288.17 TPM= 33.79 Transcript Type= protein_coding
chr4	78551519	78610421	78551519	78610421	+	ENST00000264908.10@ANXA3	ENST00000264908.10	protein_coding	78551519,78554436,78573180,78579027,78582177,78586260,78591544,78595381,78595794,78597319,78601510,78604277,78610056	78551859,78554488,78573267,78579121,78582290,78586350,78591623,78595437,78595887,78597414,78601568,78604399,78610421	Gene ID= ENSG00000138772.12 TPM= 3.86 Transcript Type= protein_coding
chr4	78553885	78610451	78553885	78610451	+	transcript1863.chr4.nic@ANXA3	transcript1863.chr4.nic	protein_coding	78553885,78554436,78573180,78579027,78582177,78586260,78591544,78595381,78595794,78597319,78601510,78604277,78610056	78554045,78554488,78573267,78579121,78582290,78586350,78591623,78595437,78595887,78597414,78601568,78604399,78610451	Gene ID= ENSG00000138772.12 TPM= 1.93 Transcript Type= NA
chr4	78911878	78939438	78911878	78939438	-	ENST00000512733.5@PAQR3	ENST00000512733.5	protein_coding	78939040,78935121,78930170,78926521,78923857,78911878	78939438,78935283,78930325,78926718,78923947,78920681	Gene ID= ENSG00000163291.14 TPM= 16.41 Transcript Type= protein_coding
chr4	79905571	80073069	79905571	80073069	-	transcript1876.chr4.nic@ANTXR2	transcript1876.chr4.nic	protein_coding	80072409,80071583,80069436,80055932,80055360,80055150,80054272,80035972,80033472,80031623,80018898,80008521,79984819,79983878,79978007,79977621,79907405,79905571	80073069,80071654,80069507,80056013,80055467,80055218,80054352,80036032,80033570,80031692,80018976,80008616,79984863,79983970,79978174,79977701,79907467,79906172	Gene ID= ENSG00000163297.16 TPM= 3.38 Transcript Type= NA
chr4	79905571	80073081	79905571	80073081	-	transcript1879.chr4.nnic@ANTXR2	transcript1879.chr4.nnic	protein_coding	80072709,80071583,80069436,80055932,80055360,80055150,80054272,80035972,80033472,80031623,80018898,80008521,79984819,79983878,79978007,79977621,79905571	80073081,80071654,80069507,80056013,80055467,80055218,80054352,80036032,80033570,80031692,80018976,80008616,79984863,79983970,79978174,79977701,79907467	Gene ID= ENSG00000163297.16 TPM= 3.38 Transcript Type= NA
chr4	82353829	82373986	82353829	82373986	-	ENST00000353341.8@HNRNPD	ENST00000353341.8	protein_coding	82373446,82371528,82359471,82358659,82357313,82356796,82355304,82353829	82373986,82371584,82359639,82358820,82357444,82356895,82355401,82354154	Gene ID= ENSG00000138668.18 TPM= 80.12 Transcript Type= protein_coding
chr4	82353834	82373983	82353834	82373983	-	ENST00000352301.8@HNRNPD	ENST00000352301.8	protein_coding	82373446,82359471,82358659,82357313,82356796,82356537,82355304,82353834	82373983,82359639,82358820,82357444,82356895,82356683,82355401,82354154	Gene ID= ENSG00000138668.18 TPM= 1.93 Transcript Type= protein_coding
chr4	82374402	82384027	82374402	82384027	+	ENST00000609575.1@AC124016.1	ENST00000609575.1	antisense_RNA	82374402,82383734	82374726,82384027	Gene ID= ENSG00000272677.1 TPM= 1.93 Transcript Type= antisense_RNA
chr4	82424629	82429441	82424629	82429441	-	ENST00000602300.5@HNRNPDL	ENST00000602300.5	protein_coding	82429248,82428278,82428018,82427433,82427190,82426463,82426037,82424629	82429441,82428446,82428179,82427564,82427304,82426633,82426129,82424883	Gene ID= ENSG00000152795.17 TPM= 346.06 Transcript Type= protein_coding
chr4	82424625	82429397	82424625	82429397	-	ENST00000507721.5@HNRNPDL	ENST00000507721.5	protein_coding	82429248,82428278,82428018,82427433,82427190,82426463,82424625	82429397,82428446,82428179,82427564,82427304,82426633,82426129	Gene ID= ENSG00000152795.17 TPM= 31.86 Transcript Type= protein_coding
chr4	82424631	82430399	82424631	82430399	-	ENST00000630827.1@HNRNPDL	ENST00000630827.1	protein_coding	82430342,82429248,82428278,82428018,82427433,82427190,82426463,82426037,82424631	82430399,82429412,82428446,82428179,82427564,82427304,82426633,82426129,82424883	Gene ID= ENSG00000152795.17 TPM= 14.96 Transcript Type= protein_coding
chr4	82430562	82461091	82430562	82461091	+	ENST00000273920.7@ENOPH1	ENST00000273920.7	protein_coding	82430562,82447920,82451043,82454722,82456915,82459981	82430913,82448021,82451245,82454854,82457038,82461091	Gene ID= ENSG00000145293.15 TPM= 41.51 Transcript Type= protein_coding
chr4	82483170	82562357	82483170	82562357	-	ENST00000515780.6@TMEM150C	ENST00000515780.6	protein_coding	82562163,82504578,82503059,82502895,82502727,82496068,82490061,82483170	82562357,82504667,82503112,82502927,82502794,82496195,82490238,82485719	Gene ID= ENSG00000249242.7 TPM= 1.93 Transcript Type= protein_coding
chr4	82818661	82891235	82818661	82891235	-	transcript1934.chr4.nnic@SEC31A	transcript1934.chr4.nnic	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842185,82830937,82829000,82827369,82824555,82821037,82818661	82891235,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82830975,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 5.45 Transcript Type= NA
chr4	82818661	82891266	82818661	82891266	-	ENST00000395310.6@SEC31A	ENST00000395310.6	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82829000,82827369,82824555,82821037,82818661	82891266,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 6.9 Transcript Type= protein_coding
chr4	82818661	82891235	82818661	82891235	-	transcript1943.chr4.nic@SEC31A	transcript1943.chr4.nic	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842185,82829000,82827369,82824555,82821037,82818661	82891235,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 17.52 Transcript Type= NA
chr4	82818662	82891259	82818662	82891259	-	ENST00000311785.11@SEC31A	ENST00000311785.11	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818662	82891259,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 3.49 Transcript Type= protein_coding
chr4	82818661	82891235	82818661	82891235	-	transcript1947.chr4.nic@SEC31A	transcript1947.chr4.nic	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818661	82891235,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 3.33 Transcript Type= NA
chr4	82818661	82891153	82818661	82891153	-	ENST00000513858.5@SEC31A	ENST00000513858.5	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818661	82891153,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 4.3 Transcript Type= protein_coding
chr4	82818661	82891136	82818661	82891136	-	ENST00000348405.8@SEC31A	ENST00000348405.8	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82829000,82827369,82824555,82821037,82818661	82891136,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 3.04 Transcript Type= protein_coding
chr4	82819011	82891203	82819011	82891203	-	ENST00000508502.5@SEC31A	ENST00000508502.5	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842185,82829000,82827369,82824555,82821037,82819011	82891203,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 3.25 Transcript Type= protein_coding
chr4	82822330	82824272	82822330	82824272	+	transcript1961.chr4.nnic@NA	transcript1961.chr4.nnic	NA	82822330	82824272	Gene ID= novel_gene_chr4_1962 TPM= 1.93 Transcript Type= NA
chr4	82893550	82900808	82893550	82900808	-	transcript1973.chr4.nic@THAP9-AS1	transcript1973.chr4.nic	antisense_RNA	82900334,82900077,82899713,82897989,82895692,82893550	82900808,82900223,82899737,82898062,82895774,82894847	Gene ID= ENSG00000251022.6 TPM= 1.93 Transcript Type= NA
chr4	82900752	82919969	82900752	82919969	+	ENST00000302236.9@THAP9	ENST00000302236.9	protein_coding	82900752,82904736,82906324,82907785,82916944	82900882,82904931,82906627,82907935,82919969	Gene ID= ENSG00000168152.12 TPM= 5.79 Transcript Type= protein_coding
chr4	83035090	83075818	83035090	83075818	+	ENST00000264389.6@COPS4	ENST00000264389.6	protein_coding	83035090,83045626,83049166,83049881,83056926,83057258,83063076,83066438,83068438,83075297	83035298,83045705,83049317,83049984,83057079,83057408,83063246,83066553,83068522,83075818	Gene ID= ENSG00000138663.8 TPM= 126.94 Transcript Type= protein_coding
chr4	83035225	83075756	83035225	83075756	+	ENST00000511653.1@COPS4	ENST00000511653.1	protein_coding	83035225,83045626,83049166,83049881,83056926,83057258,83063076,83066438,83068438,83073206,83075297	83035298,83045705,83049317,83049984,83057079,83057408,83063246,83066553,83068522,83073353,83075756	Gene ID= ENSG00000138663.8 TPM= 3.86 Transcript Type= protein_coding
chr4	83035207	83075797	83035207	83075797	+	ENST00000503682.5@COPS4	ENST00000503682.5	protein_coding	83035207,83045626,83049166,83049881,83056926,83057258,83063076,83065060,83066438,83068438,83075297	83035298,83045705,83049317,83049984,83057079,83057408,83063246,83065155,83066553,83068522,83075797	Gene ID= ENSG00000138663.8 TPM= 4.34 Transcript Type= protein_coding
chr4	83263824	83284914	83263824	83284914	-	ENST00000311469.8@COQ2	ENST00000311469.8	protein_coding	83284512,83278948,83273496,83272087,83269860,83267586,83263824	83284914,83279114,83273617,83272172,83269993,83267774,83264363	Gene ID= ENSG00000173085.13 TPM= 19.31 Transcript Type= protein_coding
chr4	83282050	83284569	83282050	83284569	-	transcript1995.chr4.nnic@NA	transcript1995.chr4.nnic	NA	83282050	83284569	Gene ID= novel_gene_chr4_1996 TPM= 1.93 Transcript Type= NA
chr4	83407343	83455852	83407343	83455852	-	transcript2001.chr4.nic@HELQ	transcript2001.chr4.nic	protein_coding	83455508,83453231,83448783,83446835,83446014,83443517,83441305,83439863,83436858,83432126,83431664,83429524,83427563,83425994,83421563,83418093,83416731,83407343	83455852,83453945,83448961,83447035,83446086,83443614,83441403,83440008,83437097,83432267,83431768,83429746,83427720,83426092,83421736,83418206,83416865,83407560	Gene ID= ENSG00000163312.10 TPM= 1.93 Transcript Type= NA
chr4	83452243	83455888	83452243	83455888	-	transcript2040.chr4.nic@HELQ	transcript2040.chr4.nic	protein_coding	83455397,83452243	83455888,83453945	Gene ID= ENSG00000163312.10 TPM= 4.83 Transcript Type= NA
chr4	83453187	83455888	83453187	83455888	-	transcript2044.chr4.nic@HELQ	transcript2044.chr4.nic	protein_coding	83455397,83453187	83455888,83453945	Gene ID= ENSG00000163312.10 TPM= 7.72 Transcript Type= NA
chr4	83407343	83455856	83407343	83455856	-	ENST00000295488.7@HELQ	ENST00000295488.7	protein_coding	83455397,83453231,83448783,83446835,83446014,83443517,83441305,83439863,83436858,83432126,83431664,83429524,83427563,83425994,83421563,83418093,83416731,83407343	83455856,83453945,83448961,83447035,83446086,83443614,83441403,83440008,83437097,83432267,83431768,83429746,83427720,83426092,83421736,83418206,83416865,83407560	Gene ID= ENSG00000163312.10 TPM= 7.72 Transcript Type= protein_coding
chr4	83459518	83485100	83459518	83485100	-	transcript2005.chr4.nnic@ABRAXAS1	transcript2005.chr4.nnic	protein_coding	83484986,83482154,83476643,83472222,83470203,83469032,83467454,83463494,83460940,83459518	83485100,83482244,83476679,83472288,83470396,83469151,83467538,83463608,83462902,83460177	Gene ID= ENSG00000163322.13 TPM= 1.93 Transcript Type= NA
chr4	83459517	83485181	83459517	83485181	-	ENST00000321945.11@ABRAXAS1	ENST00000321945.11	protein_coding	83484986,83482154,83476643,83472222,83470203,83469032,83467454,83463494,83459517	83485181,83482244,83476679,83472288,83470396,83469151,83467538,83463608,83462902	Gene ID= ENSG00000163322.13 TPM= 7.72 Transcript Type= protein_coding
chr4	83461885	83485101	83461885	83485101	-	transcript2017.chr4.nnic@ABRAXAS1	transcript2017.chr4.nnic	protein_coding	83484986,83482154,83476643,83472222,83470203,83469032,83467454,83463494,83461885	83485101,83482244,83476679,83472288,83470396,83469151,83467538,83463608,83463405	Gene ID= ENSG00000163322.13 TPM= 1.93 Transcript Type= NA
chr4	83460945	83485100	83460945	83485100	-	transcript2023.chr4.nnic@ABRAXAS1	transcript2023.chr4.nnic	protein_coding	83484986,83482154,83476643,83469032,83467454,83463494,83460945	83485100,83482244,83476679,83469151,83467538,83463608,83462902	Gene ID= ENSG00000163322.13 TPM= 2.9 Transcript Type= NA
chr4	83535625	83605872	83535625	83605872	+	transcript2049.chr4.nnic@GPAT3	transcript2049.chr4.nnic	protein_coding	83535625,83536504,83544536,83581562,83587255,83588210,83590199,83594845,83596858,83597430,83598051,83598644,83604668	83535889,83536763,83544602,83581832,83587329,83588299,83590292,83594960,83596913,83597515,83598179,83598723,83605872	Gene ID= ENSG00000138678.10 TPM= 4.1 Transcript Type= NA
chr4	83536276	83605872	83536276	83605872	+	transcript2052.chr4.nic@GPAT3	transcript2052.chr4.nic	protein_coding	83536276,83536504,83544536,83581562,83587255,83588210,83590199,83594845,83596858,83597430,83598051,83598644,83604668	83536355,83536763,83544602,83581832,83587329,83588299,83590292,83594960,83596913,83597515,83598179,83598723,83605872	Gene ID= ENSG00000138678.10 TPM= 8.93 Transcript Type= NA
chr4	83536108	83605875	83536108	83605875	+	ENST00000395226.6@GPAT3	ENST00000395226.6	protein_coding	83536108,83536504,83544536,83581562,83587255,83588210,83590199,83594845,83596858,83597430,83598051,83598644,83604668	83536206,83536763,83544602,83581832,83587329,83588299,83590292,83594960,83596913,83597515,83598179,83598723,83605875	Gene ID= ENSG00000138678.10 TPM= 5.07 Transcript Type= protein_coding
chr4	83536411	83605875	83536411	83605875	+	ENST00000264409.4@GPAT3	ENST00000264409.4	protein_coding	83536411,83544536,83581562,83587255,83588210,83590199,83594845,83596858,83597430,83598051,83598644,83604668	83536763,83544602,83581832,83587329,83588299,83590292,83594960,83596913,83597515,83598179,83598723,83605875	Gene ID= ENSG00000138678.10 TPM= 2.17 Transcript Type= protein_coding
chr4	85475114	86002670	85475114	86002670	+	ENST00000395184.5@ARHGAP24	ENST00000395184.5	protein_coding	85475114,85570522,85721885,85923648,85942066,85972036,85974888,85977570,85994583,86000479	85475559,85570721,85721972,85923770,85942273,85972168,85974961,85977691,85995657,86002670	Gene ID= ENSG00000138639.17 TPM= 1.93 Transcript Type= protein_coding
chr4	87006988	87141038	87006988	87141038	+	ENST00000307808.10@AFF1	ENST00000307808.10	protein_coding	87006988,87046166,87046695,87084120,87089984,87091793,87094915,87105628,87105808,87108159,87114367,87125037,87126099,87127026,87127643,87131083,87131793,87132271,87134474,87135580	87007424,87046286,87047594,87084164,87090070,87091829,87094969,87105682,87105845,87108315,87115299,87125143,87126336,87127117,87127703,87131219,87131864,87132408,87134694,87141038	Gene ID= ENSG00000172493.20 TPM= 11.58 Transcript Type= protein_coding
chr4	86935049	86974022	86935049	86974022	+	transcript2066.chr4.nnic@AFF1	transcript2066.chr4.nnic	protein_coding	86935049,86948498,86970189,86973830	86935240,86948571,86970453,86974022	Gene ID= ENSG00000172493.20 TPM= 1.93 Transcript Type= NA
chr4	86935002	87141054	86935002	87141054	+	ENST00000395146.8@AFF1	ENST00000395146.8	protein_coding	86935002,86948498,87046166,87046695,87084120,87089984,87091793,87094915,87105628,87105808,87108159,87114367,87125037,87126099,87127026,87127643,87131083,87131793,87132271,87134471,87135580	86935240,86948571,87046286,87047594,87084164,87090070,87091829,87094969,87105682,87105845,87108315,87115299,87125143,87126336,87127117,87127703,87131219,87131864,87132408,87134694,87141054	Gene ID= ENSG00000172493.20 TPM= 21.24 Transcript Type= protein_coding
chr4	86935074	86974068	86935074	86974068	+	ENST00000511996.5@AFF1	ENST00000511996.5	protein_coding	86935074,86948498,86973830	86935240,86948571,86974068	Gene ID= ENSG00000172493.20 TPM= 37.65 Transcript Type= processed_transcript
chr4	87115611	87117428	87115611	87117428	-	transcript2074.chr4.nnic@NA	transcript2074.chr4.nnic	NA	87115611	87117428	Gene ID= novel_gene_chr4_2075 TPM= 2.9 Transcript Type= NA
chr4	87175375	87220536	87175375	87220536	-	transcript2083.chr4.nic@KLHL8	transcript2083.chr4.nic	protein_coding	87220418,87195324,87185251,87183203,87178477,87175375	87220536,87195690,87185799,87183389,87178620,87176868	Gene ID= ENSG00000145332.13 TPM= 1.93 Transcript Type= NA
chr4	87336610	87391386	87336610	87391386	-	ENST00000358290.8@HSD17B11	ENST00000358290.8	protein_coding	87390861,87382255,87374699,87372709,87357279,87340490,87336610	87391386,87382362,87374830,87372815,87357416,87340606,87337366	Gene ID= ENSG00000198189.10 TPM= 11.58 Transcript Type= protein_coding
chr4	87422578	87458345	87422578	87458345	+	transcript2092.chr4.nic@NUDT9	transcript2092.chr4.nic	protein_coding	87422578,87434981,87438277,87441829,87449142,87451589,87454371,87457843	87422617,87435220,87438372,87441915,87449253,87451735,87454455,87458345	Gene ID= ENSG00000170502.12 TPM= 2.9 Transcript Type= NA
chr4	87422582	87458345	87422582	87458345	+	ENST00000302174.8@NUDT9	ENST00000302174.8	protein_coding	87422582,87434981,87438277,87441829,87449142,87451589,87454371,87457843	87423012,87435220,87438372,87441915,87449253,87451735,87454455,87458345	Gene ID= ENSG00000170502.12 TPM= 22.2 Transcript Type= protein_coding
chr4	87473335	87529504	87473335	87529504	-	ENST00000282470.10@SPARCL1	ENST00000282470.10	protein_coding	87529045,87499521,87494981,87493582,87491618,87490760,87490273,87482424,87480372,87479430,87473335	87529504,87499585,87495127,87494598,87491690,87490878,87490393,87482560,87480520,87479578,87473803	Gene ID= ENSG00000152583.12 TPM= 164.1 Transcript Type= protein_coding
chr4	87473348	87529503	87473348	87529503	-	ENST00000418378.5@SPARCL1	ENST00000418378.5	protein_coding	87529045,87504822,87499521,87494981,87493582,87491618,87490760,87490273,87482424,87480372,87479430,87473348	87529503,87504923,87499585,87495127,87494598,87491690,87490878,87490393,87482560,87480520,87479578,87473803	Gene ID= ENSG00000152583.12 TPM= 7.24 Transcript Type= protein_coding
chr4	88257620	88284736	88257620	88284736	-	ENST00000608933.5@PPM1K	ENST00000608933.5	protein_coding	88284406,88278144,88277143,88268741,88268190,88265001,88257620	88284736,88278642,88277243,88268906,88268334,88265135,88262726	Gene ID= ENSG00000163644.14 TPM= 3.86 Transcript Type= protein_coding
chr4	88378863	88443111	88378863	88443111	+	ENST00000264346.11@HERC6	ENST00000264346.11	protein_coding	88378863,88383221,88385499,88390652,88393488,88396015,88396851,88398142,88404876,88405554,88408524,88413077,88417425,88423860,88424595,88428580,88431162,88435725,88436905,88437711,88439874,88440148,88442234	88379120,88383380,88385575,88390879,88393582,88396142,88396987,88398209,88404997,88405613,88408617,88413266,88417579,88423973,88424702,88428750,88431305,88435891,88436971,88437781,88440057,88440250,88443111	Gene ID= ENSG00000138642.14 TPM= 1.93 Transcript Type= protein_coding
chr4	88520985	88523813	88520985	88523813	-	ENST00000273968.4@PYURF	ENST00000273968.4	protein_coding	88523498,88520985	88523813,88522029	Gene ID= ENSG00000145337.4 TPM= 155.42 Transcript Type= protein_coding
chr4	88592423	88708542	88592423	88708542	+	ENST00000402738.5@HERC3	ENST00000402738.5	protein_coding	88592423,88595557,88605795,88649840,88652012,88652869,88654042,88655174,88655875,88658415,88662431,88664153,88667377,88667892,88669860,88670139,88676218,88676334,88677964,88680093,88681159,88686736,88687217,88704098,88704508,88706752	88592574,88595614,88606049,88649999,88652088,88653090,88654133,88655304,88656035,88658491,88662555,88664212,88667488,88668081,88670023,88670252,88676241,88676423,88678134,88680236,88681325,88686802,88687299,88704281,88704610,88708542	Gene ID= ENSG00000138641.15 TPM= 5.79 Transcript Type= protein_coding
chr4	88592496	88657434	88592496	88657434	+	ENST00000407637.5@HERC3	ENST00000407637.5	protein_coding	88592496,88595557,88605795,88649840,88652012,88652869,88654042,88655174,88655875	88592574,88595614,88606049,88649999,88652088,88653090,88654133,88655304,88657434	Gene ID= ENSG00000138641.15 TPM= 1.93 Transcript Type= protein_coding
chr4	88695915	88698235	88695915	88698235	-	ENST00000323061.5@NAP1L5	ENST00000323061.5	protein_coding	88695915	88698235	Gene ID= ENSG00000177432.6 TPM= 11.58 Transcript Type= protein_coding
chr4	88726345	88737620	88726345	88737620	-	transcript2141.chr4.nic@FAM13A	transcript2141.chr4.nic	protein_coding	88737472,88732002,88731327,88726345	88737620,88732198,88731428,88728659	Gene ID= ENSG00000138640.14 TPM= 5.79 Transcript Type= NA
chr4	88936288	89057175	88936288	89057175	-	transcript2143.chr4.nic@FAM13A	transcript2143.chr4.nic	protein_coding	89056938,89029460,89020460,88936288	89057175,89029649,89020669,88938241	Gene ID= ENSG00000138640.14 TPM= 1.93 Transcript Type= NA
chr4	89879532	89954629	89879532	89954629	+	ENST00000394980.5@MMRN1	ENST00000394980.5	protein_coding	89879532,89894724,89909276,89911944,89923168,89927795,89934810,89951605,89952997	89879602,89895594,89909395,89912050,89923272,89927968,89936798,89951751,89954629	Gene ID= ENSG00000138722.9 TPM= 2.9 Transcript Type= protein_coding
chr4	94207845	94290821	94207845	94290821	+	ENST00000457823.6@SMARCAD1	ENST00000457823.6	protein_coding	94207845,94208346,94226119,94233954,94236952,94240906,94249654,94250752,94252616,94264707,94270728,94273617,94274738,94274890,94276339,94277022,94278422,94278616,94278923,94280592,94281472,94283121,94284960,94289473	94208070,94208584,94226296,94234122,94237018,94241006,94249755,94250833,94253007,94264906,94270818,94273716,94274797,94274965,94276474,94277159,94278517,94278733,94279050,94280780,94281590,94283303,94285069,94290821	Gene ID= ENSG00000163104.17 TPM= 4.83 Transcript Type= protein_coding
chr4	94451885	94588127	94451885	94588127	+	transcript2181.chr4.nic@PDLIM5	transcript2181.chr4.nic	protein_coding	94451885,94455247,94523724,94573351,94575616,94584986,94585565,94586408,94586989	94451995,94455384,94523875,94573393,94576034,94585003,94585737,94586444,94588127	Gene ID= ENSG00000163110.14 TPM= 30.25 Transcript Type= NA
chr4	94451886	94457184	94451886	94457184	+	ENST00000359265.8@PDLIM5	ENST00000359265.8	protein_coding	94451886,94455247,94456244	94451995,94455384,94457184	Gene ID= ENSG00000163110.14 TPM= 8.77 Transcript Type= protein_coding
chr4	94455245	94588127	94455245	94588127	+	ENST00000508216.5@PDLIM5	ENST00000508216.5	protein_coding	94455245,94523724,94573351,94575943,94584986,94585565,94586408,94586989	94455384,94523875,94573393,94576034,94585003,94585737,94586444,94588127	Gene ID= ENSG00000163110.14 TPM= 56.31 Transcript Type= protein_coding
chr4	94577582	94582711	94577582	94582711	-	transcript2213.chr4.nnic@NA	transcript2213.chr4.nnic	NA	94578133,94577582	94582711,94577817	Gene ID= novel_gene_chr4_2214 TPM= 18.34 Transcript Type= NA
chr4	94590696	94596269	94590696	94596269	+	transcript2215.chr4.nnic@NA	transcript2215.chr4.nnic	NA	94590696	94596269	Gene ID= novel_gene_chr4_2216 TPM= 7.72 Transcript Type= NA
chr4	98261384	98442666	98261384	98442666	+	transcript2223.chr4.nic@RAP1GDS1	transcript2223.chr4.nic	protein_coding	98261384,98293408,98343139,98352476,98379017,98387436,98391952,98404477,98416745,98417367,98418657,98420019,98421255,98433936,98436940,98441990	98261569,98293515,98343261,98352601,98379163,98387503,98392080,98404602,98416888,98417498,98418791,98420144,98421394,98434062,98437068,98442666	Gene ID= ENSG00000138698.14 TPM= 2.9 Transcript Type= NA
chr4	98871684	98930637	98871684	98930637	-	ENST00000450253.6@EIF4E	ENST00000450253.6	protein_coding	98929095,98901876,98891237,98887889,98887079,98884922,98871684	98930637,98901982,98891332,98887952,98887192,98885061,98881142	Gene ID= ENSG00000151247.12 TPM= 7.72 Transcript Type= protein_coding
chr4	98880056	98929133	98880056	98929133	-	transcript2239.chr4.nnic@EIF4E	transcript2239.chr4.nnic	protein_coding	98929095,98891237,98887889,98887079,98884922,98880056	98929133,98891332,98887952,98887192,98885061,98881142	Gene ID= ENSG00000151247.12 TPM= 5.79 Transcript Type= NA
chr4	99070978	99088751	99070978	99088751	-	ENST00000296412.12@ADH5	ENST00000296412.12	protein_coding	99088689,99085115,99081975,99081365,99076704,99076292,99074914,99072573,99070978	99088751,99085216,99082116,99081452,99076923,99076552,99075049,99072711,99072441	Gene ID= ENSG00000197894.10 TPM= 26.06 Transcript Type= protein_coding
chr4	99307243	99321398	99307243	99321398	-	ENST00000515694.4@ADH1B	ENST00000515694.4	protein_coding	99321314,99318785,99318046,99316215,99315898,99313821,99311521,99310765,99307243	99321398,99320914,99318184,99316302,99316117,99314081,99311656,99310903,99307864	Gene ID= ENSG00000196616.13 TPM= 1.93 Transcript Type= retained_intron
chr4	99336492	99353027	99336492	99353027	-	ENST00000515683.5@ADH1C	ENST00000515683.5	protein_coding	99352658,99347745,99347006,99345179,99344862,99342795,99340575,99339577,99336492	99353027,99347846,99347144,99345266,99345081,99343055,99340710,99339715,99336776	Gene ID= ENSG00000248144.5 TPM= 3.86 Transcript Type= protein_coding
chr4	99546709	99564017	99546709	99564017	-	ENST00000394877.7@TRMT10A	ENST00000394877.7	protein_coding	99563913,99559154,99558049,99557345,99556146,99553785,99550885,99546709	99564017,99559350,99558211,99557416,99556220,99553934,99550990,99549356	Gene ID= ENSG00000145331.13 TPM= 3.86 Transcript Type= protein_coding
chr4	99636529	99654648	99636529	99654648	-	ENST00000511828.1@AC083902.2	ENST00000511828.1	protein_coding	99649231,99636529	99654648,99641196	Gene ID= ENSG00000248713.1 TPM= 43.44 Transcript Type= protein_coding
chr4	99878336	99894490	99878336	99894490	-	ENST00000499666.6@LAMTOR3	ENST00000499666.6	protein_coding	99894335,99893955,99892000,99887296,99885542,99884062,99878336	99894490,99894000,99892034,99887354,99885675,99884125,99882067	Gene ID= ENSG00000109270.12 TPM= 1.93 Transcript Type= protein_coding
chr4	99881207	99894376	99881207	99894376	-	ENST00000226522.8@LAMTOR3	ENST00000226522.8	protein_coding	99894335,99893955,99892000,99887296,99885542,99884062,99881207	99894376,99894000,99892034,99887354,99885654,99884125,99882067	Gene ID= ENSG00000109270.12 TPM= 5.79 Transcript Type= protein_coding
chr4	99948088	99950388	99948088	99950388	-	ENST00000296417.5@H2AFZ	ENST00000296417.5	protein_coding	99950168,99949663,99949273,99948811,99948088	99950388,99949740,99949386,99948940,99948523	Gene ID= ENSG00000164032.11 TPM= 80.12 Transcript Type= protein_coding
chr4	100185870	100190468	100185870	100190468	-	ENST00000273990.6@DDIT4L	ENST00000273990.6	protein_coding	100190303,100189893,100185870	100190468,100190032,100188167	Gene ID= ENSG00000145358.6 TPM= 126.46 Transcript Type= protein_coding
chr4	100395341	100518093	100395341	100518093	-	ENST00000296420.8@EMCN	ENST00000296420.8	protein_coding	100517851,100479917,100475038,100465423,100447533,100423312,100423021,100421282,100417117,100415898,100410282,100395341	100518093,100480039,100475109,100465539,100447571,100423404,100423080,100421377,100417141,100415959,100410355,100398373	Gene ID= ENSG00000164035.9 TPM= 4.83 Transcript Type= protein_coding
chr4	101025318	101347597	101025318	101347597	-	transcript2298.chr4.nnic@PPP3CA	transcript2298.chr4.nnic	protein_coding	101347289,101346739,101195916,101108954,101099611,101098367,101093776,101083186,101080532,101063232,101061087,101040482,101032267,101029166,101025318	101347597,101347041,101196116,101109078,101099722,101098512,101093915,101083263,101080626,101063357,101061161,101040566,101032364,101029195,101026061	Gene ID= ENSG00000138814.16 TPM= 3.86 Transcript Type= NA
chr4	101347780	101348883	101347780	101348883	+	ENST00000527564.1@FLJ20021	ENST00000527564.1	lincRNA	101347780,101348324	101348009,101348883	Gene ID= ENSG00000254531.1 TPM= 2.9 Transcript Type= lincRNA
chr4	102501329	102617302	102501329	102617302	+	ENST00000226574.8@NFKB1	ENST00000226574.8	protein_coding	102501329,102525512,102529836,102533845,102537858,102566987,102576876,102578881,102580535,102582866,102584682,102593425,102594892,102596138,102597520,102600895,102606496,102607150,102607649,102610575,102612044,102612434,102613425,102616434	102501788,102525557,102529914,102533885,102537956,102567135,102577039,102579039,102580639,102582957,102584820,102593568,102594981,102596332,102597661,102601009,102606697,102607319,102607751,102610699,102612110,102612606,102613581,102617302	Gene ID= ENSG00000109320.11 TPM= 12.55 Transcript Type= protein_coding
chr4	102794383	102827533	102794383	102827533	-	transcript2326.chr4.nic@UBE2D3	transcript2326.chr4.nic	protein_coding	102827427,102826485,102809792,102809672,102802561,102801454,102799407,102798928,102794383	102827533,102826636,102809855,102809703,102802638,102801559,102799500,102798977,102797460	Gene ID= ENSG00000109332.19 TPM= 19.72 Transcript Type= NA
chr4	102794383	102827812	102794383	102827812	-	ENST00000453744.6@UBE2D3	ENST00000453744.6	protein_coding	102827427,102826485,102809792,102809672,102802561,102801454,102799407,102794383	102827812,102826636,102809855,102809703,102802638,102801559,102799500,102797460	Gene ID= ENSG00000109332.19 TPM= 41.98 Transcript Type= protein_coding
chr4	102795976	102827948	102795976	102827948	-	ENST00000394801.8@UBE2D3	ENST00000394801.8	protein_coding	102827592,102826485,102809792,102809672,102802561,102801454,102799407,102795976	102827948,102826636,102809855,102809703,102802638,102801559,102799500,102797460	Gene ID= ENSG00000109332.19 TPM= 21.21 Transcript Type= protein_coding
chr4	102795976	102828159	102795976	102828159	-	ENST00000394803.9@UBE2D3	ENST00000394803.9	protein_coding	102827944,102826485,102809792,102809672,102802561,102801454,102799407,102795976	102828159,102826636,102809855,102809703,102802638,102801559,102799500,102797460	Gene ID= ENSG00000109332.19 TPM= 13.49 Transcript Type= protein_coding
chr4	102868978	102889242	102868978	102889242	+	ENST00000273986.8@CISD2	ENST00000273986.8	protein_coding	102868978,102885216,102887341	102869187,102885430,102889242	Gene ID= ENSG00000145354.9 TPM= 3.86 Transcript Type= protein_coding
chr4	103079435	103099883	103079435	103099883	-	ENST00000296424.8@BDH2	ENST00000296424.8	protein_coding	103099783,103096183,103095203,103092600,103091177,103086480,103085349,103082871,103082081,103079435	103099883,103096274,103095281,103092696,103091285,103086540,103085462,103082929,103082173,103079755	Gene ID= ENSG00000164039.14 TPM= 13.51 Transcript Type= protein_coding
chr4	103145131	103198382	103145131	103198382	-	transcript2388.chr4.nnic@CENPE	transcript2388.chr4.nnic	protein_coding	103198264,103196759,103196163,103195920,103195114,103194603,103194374,103194229,103185810,103183201,103182762,103181337,103180311,103176899,103175960,103174736,103163137,103161335,103161086,103160625,103159010,103158614,103158300,103151219,103149118,103148844,103147356,103145829,103145523,103145131	103198382,103196850,103196252,103196038,103195233,103194684,103194441,103194294,103185861,103183288,103182891,103181456,103180469,103177046,103176048,103174903,103163256,103161457,103161251,103160779,103159324,103158886,103158458,103151377,103149408,103148999,103147646,103146107,103145681,103145334	Gene ID= ENSG00000138778.11 TPM= 1.93 Transcript Type= NA
chr4	105369565	105474060	105369565	105474060	-	transcript2392.chr4.nic@PPA2	transcript2392.chr4.nic	protein_coding	105473894,105453598,105449350,105446383,105437950,105424196,105399037,105396249,105386567,105370837,105369565	105474060,105453642,105449403,105446502,105438036,105424322,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 3.54 Transcript Type= NA
chr4	105369565	105473994	105369565	105473994	-	transcript2394.chr4.nic@PPA2	transcript2394.chr4.nic	protein_coding	105473894,105453598,105449350,105446383,105424196,105399037,105396249,105386567,105370837,105369565	105473994,105453642,105449403,105446502,105424322,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 2.58 Transcript Type= NA
chr4	105369565	105473994	105369565	105473994	-	transcript2395.chr4.nic@PPA2	transcript2395.chr4.nic	protein_coding	105473894,105456681,105453598,105449350,105446383,105399037,105396249,105386567,105370837,105369565	105473994,105456745,105453642,105449403,105446502,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 2.58 Transcript Type= NA
chr4	105471363	105474071	105471363	105474071	-	transcript2398.chr4.nnic@NA	transcript2398.chr4.nnic	NA	105471363	105474071	Gene ID= novel_gene_chr4_2399 TPM= 4.83 Transcript Type= NA
chr4	105682627	105708681	105682627	105708681	-	ENST00000340139.9@INTS12	ENST00000340139.9	protein_coding	105708638,105703648,105699850,105695516,105693299,105691976,105686692,105682627	105708681,105703809,105700014,105695668,105693486,105692135,105686838,105683317	Gene ID= ENSG00000138785.14 TPM= 7.08 Transcript Type= protein_coding
chr4	105682627	105708660	105682627	105708660	-	transcript2406.chr4.nic@INTS12	transcript2406.chr4.nic	protein_coding	105707919,105699850,105695516,105693299,105691976,105686692,105682627	105708660,105700014,105695668,105693486,105692135,105686838,105683317	Gene ID= ENSG00000138785.14 TPM= 5.15 Transcript Type= NA
chr4	105682627	105709108	105682627	105709108	-	ENST00000451321.6@INTS12	ENST00000451321.6	protein_coding	105708638,105699850,105695516,105693299,105691976,105686692,105682627	105709108,105700014,105695668,105693486,105692135,105686838,105683317	Gene ID= ENSG00000138785.14 TPM= 21.56 Transcript Type= protein_coding
chr4	105708821	105719955	105708821	105719955	+	transcript2408.chr4.nic@GSTCD	transcript2408.chr4.nic	protein_coding	105708821,105717593,105719060	105709016,105718039,105719955	Gene ID= ENSG00000138780.14 TPM= 1.93 Transcript Type= NA
chr4	105895437	105971674	105895437	105971674	+	ENST00000379987.6@NPNT	ENST00000379987.6	protein_coding	105895437,105897901,105927336,105937009,105938301,105940075,105940514,105942307,105958471,105959028,105967188,105968895	105895723,105898001,105927428,105937128,105938420,105940209,105940636,105942702,105958557,105959126,105967444,105971674	Gene ID= ENSG00000168743.12 TPM= 2.9 Transcript Type= protein_coding
chr4	106316401	106328238	106316401	106328238	+	transcript2421.chr4.nic@AIMP1	transcript2421.chr4.nic	protein_coding	106316401,106324985,106327451,106328076	106316594,106325118,106327564,106328238	Gene ID= ENSG00000164022.16 TPM= 27.99 Transcript Type= NA
chr4	106316568	106328238	106316568	106328238	+	transcript2422.chr4.nnic@AIMP1	transcript2422.chr4.nnic	protein_coding	106316568,106324985,106327451,106328076	106321451,106325118,106327564,106328238	Gene ID= ENSG00000164022.16 TPM= 2.9 Transcript Type= NA
chr4	106316507	106349226	106316507	106349226	+	ENST00000394701.4@AIMP1	ENST00000394701.4	protein_coding	106316507,106324985,106327451,106328076,106331672,106336869,106347526	106316594,106325118,106327564,106328243,106331883,106337037,106349226	Gene ID= ENSG00000164022.16 TPM= 27.99 Transcript Type= protein_coding
chr4	107613666	107720452	107613666	107720452	-	ENST00000265174.4@PAPSS1	ENST00000265174.4	protein_coding	107720120,107701171,107693771,107687039,107682015,107659959,107656896,107654695,107653491,107644802,107631631,107613666	107720452,107701285,107694006,107687177,107682133,107660072,107657007,107654900,107653626,107645070,107631860,107614387	Gene ID= ENSG00000138801.8 TPM= 7.72 Transcript Type= protein_coding
chr4	107613885	107720036	107613885	107720036	-	transcript2426.chr4.nic@PAPSS1	transcript2426.chr4.nic	protein_coding	107719843,107701171,107693771,107687039,107682015,107659959,107656896,107654695,107653491,107644802,107631631,107613885	107720036,107701285,107694006,107687177,107682133,107660072,107657007,107654900,107653626,107645070,107631860,107614387	Gene ID= ENSG00000138801.8 TPM= 2.9 Transcript Type= NA
chr4	107824563	107915047	107824563	107915047	+	ENST00000394684.8@SGMS2	ENST00000394684.8	protein_coding	107824563,107858472,107895310,107899575,107903233,107908565,107910350	107824793,107858553,107896008,107899692,107903386,107908731,107915047	Gene ID= ENSG00000164023.14 TPM= 1.93 Transcript Type= protein_coding
chr4	107824869	107910953	107824869	107910953	+	transcript2430.chr4.nic@SGMS2	transcript2430.chr4.nic	protein_coding	107824869,107858472,107895310,107899575,107903233,107908565,107910350	107825253,107858553,107896008,107899692,107903386,107908731,107910953	Gene ID= ENSG00000164023.14 TPM= 1.93 Transcript Type= NA
chr4	107910385	107989687	107910385	107989687	-	transcript2443.chr4.nnic@AC096564.1	transcript2443.chr4.nnic	antisense_RNA	107989568,107910385	107989687,107910549	Gene ID= ENSG00000245293.2 TPM= 1.93 Transcript Type= NA
chr4	107931369	107953457	107931369	107953457	+	ENST00000332884.10@CYP2U1	ENST00000332884.10	protein_coding	107931369,107944970,107947376,107949350,107950245	107932133,107945605,107947537,107949517,107953457	Gene ID= ENSG00000155016.17 TPM= 3.86 Transcript Type= protein_coding
chr4	107931549	107932722	107931549	107932722	+	transcript2444.chr4.nnic@NA	transcript2444.chr4.nnic	NA	107931549	107932722	Gene ID= novel_gene_chr4_2445 TPM= 4.83 Transcript Type= NA
chr4	107989784	108035175	107989784	108035175	+	ENST00000309522.7@HADH	ENST00000309522.7	protein_coding	107989784,108009759,108014431,108019540,108023474,108027688,108033176,108034239	107990064,108009887,108014588,108019666,108023563,108027760,108033292,108035175	Gene ID= ENSG00000138796.16 TPM= 290.56 Transcript Type= protein_coding
chr4	107989896	108035118	107989896	108035118	+	ENST00000403312.6@HADH	ENST00000403312.6	protein_coding	107989896,108009759,108014431,108019540,108023474,108027688,108028861,108033176,108034239	107990064,108009887,108014588,108019666,108023563,108027760,108028869,108033292,108035118	Gene ID= ENSG00000138796.16 TPM= 1.93 Transcript Type= protein_coding
chr4	107990745	107994735	107990745	107994735	-	transcript2459.chr4.nnic@NA	transcript2459.chr4.nnic	NA	107990745	107994735	Gene ID= novel_gene_chr4_2460 TPM= 14.48 Transcript Type= NA
chr4	108620590	108625255	108620590	108625255	+	ENST00000394665.5@RPL34	ENST00000394665.5	protein_coding	108620590,108621951,108622105,108622515,108625128	108620712,108622024,108622204,108622618,108625255	Gene ID= ENSG00000109475.16 TPM= 92.19 Transcript Type= protein_coding
chr4	108620566	108625255	108620566	108625255	+	ENST00000394667.7@RPL34	ENST00000394667.7	protein_coding	108620566,108621951,108622105,108622515,108625128	108620600,108622024,108622204,108622618,108625255	Gene ID= ENSG00000109475.16 TPM= 448.39 Transcript Type= protein_coding
chr4	108620656	108630412	108620656	108630412	+	ENST00000394668.2@RPL34	ENST00000394668.2	protein_coding	108620656,108621951,108622105,108622515,108625128,108630021	108620712,108622024,108622204,108622618,108625253,108630412	Gene ID= ENSG00000109475.16 TPM= 1.93 Transcript Type= protein_coding
chr4	108650584	108667820	108650584	108667820	+	ENST00000361564.8@OSTC	ENST00000361564.8	protein_coding	108650584,108655564,108657450,108667247	108650794,108655657,108657647,108667820	Gene ID= ENSG00000198856.12 TPM= 30.89 Transcript Type= protein_coding
chr4	108650631	108667820	108650631	108667820	+	transcript2472.chr4.nnic@OSTC	transcript2472.chr4.nnic	protein_coding	108650631,108655564,108657450,108667247	108650753,108655657,108657647,108667820	Gene ID= ENSG00000198856.12 TPM= 1.93 Transcript Type= NA
chr4	109433700	109540455	109433700	109540455	+	transcript2476.chr4.nic@SEC24B	transcript2476.chr4.nic	protein_coding	109433700,109462901,109473004,109491327,109494615,109506331,109510009,109511957,109513747,109516528,109520366,109521117,109521420,109524818,109525346,109526226,109527322,109530289,109531385,109532639,109533593,109538493,109539561	109434002,109463644,109473186,109491407,109494856,109506512,109510111,109512083,109513856,109516640,109520484,109521172,109521626,109524941,109525504,109526399,109527432,109530464,109531522,109532743,109533685,109538596,109540455	Gene ID= ENSG00000138802.11 TPM= 17.38 Transcript Type= NA
chr4	109688742	109703473	109688742	109703473	-	ENST00000265164.6@CASP6	ENST00000265164.6	protein_coding	109703356,109698300,109697622,109696410,109694525,109690850,109688742	109703473,109698342,109697768,109696486,109694700,109691009,109689568	Gene ID= ENSG00000138794.9 TPM= 1.93 Transcript Type= protein_coding
chr4	109688742	109703443	109688742	109703443	-	transcript2484.chr4.nic@CASP6	transcript2484.chr4.nic	protein_coding	109703356,109698300,109697622,109694525,109690850,109688742	109703443,109698342,109697768,109694700,109691009,109689568	Gene ID= ENSG00000138794.9 TPM= 1.93 Transcript Type= NA
chr4	109709989	109730077	109709989	109730077	-	ENST00000243501.9@PLA2G12A	ENST00000243501.9	protein_coding	109729602,109718683,109717548,109709989	109730077,109718759,109717713,109714495	Gene ID= ENSG00000123739.10 TPM= 2.9 Transcript Type= protein_coding
chr4	109740694	109802179	109740694	109802179	-	ENST00000394634.6@CFI	ENST00000394634.6	protein_coding	109801915,109766554,109764537,109761517,109760523,109760270,109757763,109752468,109749499,109749218,109746222,109742491,109740694	109802179,109766824,109764690,109761692,109760636,109760380,109757783,109752503,109749602,109749321,109746502,109742595,109741110	Gene ID= ENSG00000205403.12 TPM= 2.9 Transcript Type= protein_coding
chr4	109815510	109824740	109815510	109824740	+	ENST00000394631.7@GAR1	ENST00000394631.7	protein_coding	109815510,109816153,109817936,109819001,109822347,109823965,109824418	109815545,109816378,109818090,109819060,109822488,109824033,109824740	Gene ID= ENSG00000109534.16 TPM= 4.83 Transcript Type= protein_coding
chr4	109815553	109824737	109815553	109824737	+	ENST00000226796.6@GAR1	ENST00000226796.6	protein_coding	109815553,109816153,109817936,109819001,109822347,109823965,109824418	109815804,109816378,109818090,109819060,109822488,109824033,109824737	Gene ID= ENSG00000109534.16 TPM= 9.65 Transcript Type= protein_coding
chr4	109912882	110012260	109912882	110012260	+	transcript2503.chr4.nic@EGF	transcript2503.chr4.nic	protein_coding	109912882,109940946,109943254,109943842,109945073,109959312,109960867,109961863,109963173,109964401,109968971,109974703,109976012,109979972,109980826,109983422,109987744,109988584,109993247,109994733,109999679,110004505,110011202	109913462,109941145,109943435,109944069,109945275,109959437,109960989,109961985,109963298,109964537,109969119,109974807,109976235,109980139,109980975,109983541,109987860,109988709,109993369,109994880,109999846,110004622,110012260	Gene ID= ENSG00000138798.11 TPM= 18.34 Transcript Type= NA
chr4	109912891	110012266	109912891	110012266	+	ENST00000265171.9@EGF	ENST00000265171.9	protein_coding	109912891,109940946,109943254,109943842,109945073,109959312,109960867,109961863,109963173,109964401,109968971,109974703,109976012,109979972,109980826,109983422,109987744,109988584,109993247,109994733,109999679,110004505,110008152,110011202	109913462,109941145,109943435,109944069,109945275,109959437,109960989,109961985,109963298,109964537,109969119,109974807,109976235,109980139,109980975,109983541,109987860,109988709,109993369,109994880,109999846,110004622,110008230,110012266	Gene ID= ENSG00000138798.11 TPM= 11.58 Transcript Type= protein_coding
chr4	109918257	109919758	109918257	109919758	-	transcript2523.chr4.nnic@NA	transcript2523.chr4.nnic	NA	109918257	109919758	Gene ID= novel_gene_chr4_2524 TPM= 2.9 Transcript Type= NA
chr4	110012852	110014703	110012852	110014703	+	transcript2521.chr4.nnic@NA	transcript2521.chr4.nnic	NA	110012852	110014703	Gene ID= novel_gene_chr4_2522 TPM= 1.93 Transcript Type= NA
chr4	110617423	110637352	110617423	110637352	-	ENST00000355080.9@PITX2	ENST00000355080.9	protein_coding	110636781,110632953,110621164,110617423	110637352,110633008,110621369,110618688	Gene ID= ENSG00000164093.15 TPM= 4.34 Transcript Type= protein_coding
chr4	110617423	110621606	110617423	110621606	-	transcript2538.chr4.nic@PITX2	transcript2538.chr4.nic	protein_coding	110621164,110617423	110621606,110618688	Gene ID= ENSG00000164093.15 TPM= 14 Transcript Type= NA
chr4	110617423	110623103	110617423	110623103	-	ENST00000306732.7@PITX2	ENST00000306732.7	protein_coding	110622256,110621164,110617423	110623103,110621369,110618688	Gene ID= ENSG00000164093.15 TPM= 50.68 Transcript Type= protein_coding
chr4	110617423	110637020	110617423	110637020	-	ENST00000394598.6@PITX2	ENST00000394598.6	protein_coding	110636781,110632953,110632343,110621164,110617423	110637020,110633008,110632480,110621369,110618688	Gene ID= ENSG00000164093.15 TPM= 6.27 Transcript Type= protein_coding
chr4	110633790	110641007	110633790	110641007	+	transcript2536.chr4.nnic@NA	transcript2536.chr4.nnic	NA	110633790,110639291	110634031,110641007	Gene ID= novel_gene_chr4_2537 TPM= 1.93 Transcript Type= NA
chr4	112145454	112189023	112145454	112189023	+	transcript2546.chr4.nnic@C4orf32	transcript2546.chr4.nnic	protein_coding	112145454,112180674,112186693	112145733,112180858,112189023	Gene ID= ENSG00000174749.5 TPM= 1.93 Transcript Type= NA
chr4	112145397	112195256	112145397	112195256	+	ENST00000309733.5@C4orf32	ENST00000309733.5	protein_coding	112145397,112186693	112145733,112195256	Gene ID= ENSG00000174749.5 TPM= 2.9 Transcript Type= protein_coding
chr4	112231737	112270047	112231737	112270047	+	ENST00000274000.9@AP1AR	ENST00000274000.9	protein_coding	112231737,112253208,112254747,112257772,112260766,112262988,112265009,112265734,112266588,112268144	112232174,112253256,112254773,112257797,112260862,112263086,112265067,112265807,112266716,112270047	Gene ID= ENSG00000138660.11 TPM= 31.86 Transcript Type= protein_coding
chr4	112636964	112657586	112636964	112657586	+	ENST00000344442.9@LARP7	ENST00000344442.9	protein_coding	112636964,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247	112637239,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586	Gene ID= ENSG00000174720.15 TPM= 5.47 Transcript Type= protein_coding
chr4	112637502	112657586	112637502	112657586	+	transcript2565.chr4.nic@LARP7	transcript2565.chr4.nic	protein_coding	112637502,112644668,112646351,112646588,112646791,112647034,112647199,112647651,112649535,112650461,112653077,112654068,112657247	112637603,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586	Gene ID= ENSG00000174720.15 TPM= 4.51 Transcript Type= NA
chr4	112637456	112657592	112637456	112657592	+	ENST00000324052.10@LARP7	ENST00000324052.10	protein_coding	112637456,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247	112637603,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657592	Gene ID= ENSG00000174720.15 TPM= 9.33 Transcript Type= protein_coding
chr4	113145692	113256691	113145692	113256691	+	transcript2576.chr4.nnic@ANK2	transcript2576.chr4.nnic	protein_coding	113145692,113174416,113196368,113199011,113232161,113236987,113240485,113242111,113243503,113249764,113255735	113146003,113174517,113196466,113199109,113232259,113237172,113240583,113242209,113243538,113249862,113256691	Gene ID= ENSG00000145362.17 TPM= 1.93 Transcript Type= NA
chr4	113214046	113214393	113214046	113214393	-	ENST00000485827.1@AC004057.1	ENST00000485827.1	transcribed_processed_pseudogene	113214046	113214393	Gene ID= ENSG00000196656.7 TPM= 406.4 Transcript Type= transcribed_processed_pseudogene
chr4	113381712	113383657	113381712	113383657	+	transcript2577.chr4.nnic@NA	transcript2577.chr4.nnic	NA	113381712	113383657	Gene ID= novel_gene_chr4_2578 TPM= 1.93 Transcript Type= NA
chr4	113452416	113761788	113452416	113761788	-	transcript2582.chr4.nnic@CAMK2D	transcript2582.chr4.nnic	protein_coding	113761004,113759320,113679403,113677508,113661713,113609152,113552031,113548657,113537341,113531216,113517563,113515069,113513830,113513328,113509638,113502936,113500463,113465529,113460147,113457335,113455726,113452416	113761788,113759414,113679496,113677608,113661772,113609206,113552096,113548729,113537443,113531299,113517657,113515191,113513913,113513370,113509672,113502977,113500511,113465604,113460241,113457563,113455821,113454515	Gene ID= ENSG00000145349.16 TPM= 4.72 Transcript Type= NA
chr4	113451925	113761788	113451925	113761788	-	transcript2590.chr4.nic@CAMK2D	transcript2590.chr4.nic	protein_coding	113761004,113759320,113661713,113609152,113552031,113548657,113537341,113531216,113517563,113515069,113513830,113513328,113509638,113502936,113500463,113465529,113460147,113457335,113455726,113451925	113761788,113759414,113661772,113609206,113552096,113548729,113537443,113531299,113517657,113515191,113513913,113513370,113509672,113502977,113500511,113465604,113460241,113457563,113455821,113454515	Gene ID= ENSG00000145349.16 TPM= 25.36 Transcript Type= NA
chr4	118278758	118279821	118278758	118279821	+	ENST00000602819.5@SNHG8	ENST00000602819.5	lincRNA	118278758,118278944,118279389,118279624	118278792,118279137,118279431,118279821	Gene ID= ENSG00000269893.6 TPM= 3.7 Transcript Type= lincRNA
chr4	118278755	118279820	118278755	118279820	+	ENST00000602483.5@SNHG8	ENST00000602483.5	lincRNA	118278755,118279107,118279389,118279624	118278792,118279137,118279431,118279820	Gene ID= ENSG00000269893.6 TPM= 23.49 Transcript Type= lincRNA
chr4	118278709	118279823	118278709	118279823	+	ENST00000602520.5@SNHG8	ENST00000602520.5	lincRNA	118278709,118279389,118279624	118278792,118279431,118279823	Gene ID= ENSG00000269893.6 TPM= 53.89 Transcript Type= lincRNA
chr4	118278709	118279823	118278709	118279823	+	ENST00000602414.5@SNHG8	ENST00000602414.5	lincRNA	118278709,118279389,118279624	118279137,118279431,118279823	Gene ID= ENSG00000269893.6 TPM= 30.89 Transcript Type= lincRNA
chr4	118722823	118836138	118722823	118836138	-	ENST00000280551.10@SEC24D	ENST00000280551.10	protein_coding	118835941,118833579,118824620,118817264,118815451,118815028,118805843,118797683,118768173,118764802,118757721,118752697,118751996,118744944,118743988,118740941,118740663,118739149,118738261,118732733,118731316,118728561,118722823	118836138,118833737,118824749,118817412,118815726,118815155,118805954,118797810,118768311,118764917,118757845,118752888,118752089,118745060,118744158,118741037,118740808,118739287,118738379,118732912,118731507,118728650,118723655	Gene ID= ENSG00000150961.14 TPM= 10.62 Transcript Type= protein_coding
chr4	118973293	118976480	118973293	118976480	-	transcript2667.chr4.nnic@NA	transcript2667.chr4.nnic	NA	118973293	118976480	Gene ID= novel_gene_chr4_2668 TPM= 5.79 Transcript Type= NA
chr4	119027178	119029307	119027178	119029307	+	transcript2651.chr4.nnic@NA	transcript2651.chr4.nnic	NA	119027178	119029307	Gene ID= novel_gene_chr4_2652 TPM= 8.69 Transcript Type= NA
chr4	119028224	119030722	119028224	119030722	-	transcript2671.chr4.nnic@NA	transcript2671.chr4.nnic	NA	119028224	119030722	Gene ID= novel_gene_chr4_2672 TPM= 13.51 Transcript Type= NA
chr4	119035961	119037437	119035961	119037437	+	transcript2676.chr4.nnic@NA	transcript2676.chr4.nnic	NA	119035961	119037437	Gene ID= novel_gene_chr4_2677 TPM= 3.86 Transcript Type= NA
chr4	119135784	119187789	119135784	119187789	+	ENST00000307128.5@MYOZ2	ENST00000307128.5	protein_coding	119135784,119136512,119150872,119158022,119164211,119185966	119135982,119136601,119151041,119158151,119164394,119187789	Gene ID= ENSG00000172399.5 TPM= 150.59 Transcript Type= protein_coding
chr4	119212638	119240099	119212638	119240099	+	transcript2694.chr4.nic@USP53	transcript2694.chr4.nic	protein_coding	119212638,119214070,119217550,119235290,119239218	119212873,119214222,119217673,119235411,119240099	Gene ID= ENSG00000145390.11 TPM= 1.93 Transcript Type= NA
chr4	119409313	119440958	119409313	119440958	-	transcript2703.chr4.nnic@GTF2IP12	transcript2703.chr4.nnic	transcribed_unprocessed_pseudogene	119440560,119434740,119431835,119429420,119422457,119420494,119419965,119419044,119412352,119410232,119409313	119440958,119434977,119431901,119429607,119422574,119420595,119420155,119419112,119412544,119410289,119410138	Gene ID= ENSG00000283050.1 TPM= 3.86 Transcript Type= NA
chr4	119454814	119499974	119454814	119499974	+	transcript2712.chr4.nic@AC093752.1	transcript2712.chr4.nic	transcribed_unprocessed_pseudogene	119454814,119460183,119460731,119461717,119462896,119488645,119493333,119494433,119497811,119499561	119455133,119460242,119460827,119461851,119462979,119488717,119493437,119494523,119497903,119499974	Gene ID= ENSG00000245958.6 TPM= 1.93 Transcript Type= NA
chr4	119504423	119629011	119504423	119629011	-	transcript2710.chr4.nic@PDE5A	transcript2710.chr4.nic	protein_coding	119628520,119606709,119596523,119567073,119565321,119562833,119560296,119553638,119552550,119542459,119538960,119525549,119520935,119519045,119511047,119507604,119505855,119504423	119629011,119607297,119596612,119567144,119565410,119562970,119560363,119553746,119552637,119542634,119539019,119525695,119521060,119519139,119511134,119507704,119505932,119504599	Gene ID= ENSG00000138735.15 TPM= 1.93 Transcript Type= NA
chr4	120116784	120119025	120116784	120119025	-	transcript2722.chr4.nnic@NA	transcript2722.chr4.nnic	NA	120116784	120119025	Gene ID= novel_gene_chr4_2723 TPM= 1.93 Transcript Type= NA
chr4	120838002	120922757	120838002	120922757	-	transcript2733.chr4.nnic@PRDM5	transcript2733.chr4.nnic	protein_coding	120922516,120907474,120853418,120848442,120838002	120922757,120907557,120853540,120848497,120839274	Gene ID= ENSG00000138738.10 TPM= 1.93 Transcript Type= NA
chr4	120837345	120922870	120837345	120922870	-	ENST00000394435.2@PRDM5	ENST00000394435.2	protein_coding	120922516,120907474,120853418,120837345	120922870,120907557,120853540,120839274	Gene ID= ENSG00000138738.10 TPM= 1.93 Transcript Type= protein_coding
chr4	121668027	121697000	121668027	121697000	-	transcript2740.chr4.nnic@ANXA5	transcript2740.chr4.nnic	protein_coding	121696863,121696581,121686288,121684677,121683364,121681671,121678415,121677894,121672533,121671547,121670174,121669954,121669602,121668027	121697000,121696624,121686372,121684771,121683477,121681761,121678494,121677950,121672626,121671642,121670236,121670012,121669724,121668527	Gene ID= ENSG00000164111.14 TPM= 2.9 Transcript Type= NA
chr4	121667955	121697113	121667955	121697113	-	ENST00000296511.9@ANXA5	ENST00000296511.9	protein_coding	121696863,121696581,121686288,121684677,121683364,121681671,121678415,121677894,121672533,121671547,121669954,121669602,121667955	121697113,121696624,121686372,121684771,121683477,121681761,121678494,121677950,121672626,121671642,121670012,121669724,121668527	Gene ID= ENSG00000164111.14 TPM= 106.18 Transcript Type= protein_coding
chr4	121801317	121816909	121801317	121816909	+	ENST00000243498.9@EXOSC9	ENST00000243498.9	protein_coding	121801317,121801827,121802674,121802915,121804622,121807540,121809967,121811583,121813234,121813866,121816369,121816772	121801490,121801921,121802793,121803017,121804759,121807622,121810099,121811671,121813380,121814047,121816447,121816909	Gene ID= ENSG00000123737.12 TPM= 4.83 Transcript Type= protein_coding
chr4	121824440	121870497	121824440	121870497	-	ENST00000264499.8@BBS7	ENST00000264499.8	protein_coding	121870278,121867981,121863217,121861504,121858992,121855489,121854704,121852956,121848844,121847404,121845504,121843927,121839631,121835144,121833231,121828619,121828402,121828146,121824440	121870497,121868046,121863279,121861679,121859178,121855561,121854820,121853086,121848928,121847506,121845696,121844001,121839696,121835283,121833395,121828728,121828505,121828269,121825993	Gene ID= ENSG00000138686.9 TPM= 2.9 Transcript Type= protein_coding
chr4	121827727	121870450	121827727	121870450	-	ENST00000506636.1@BBS7	ENST00000506636.1	protein_coding	121870278,121867981,121863217,121861504,121858992,121855489,121854704,121852956,121848844,121847404,121845504,121843927,121839631,121835144,121833231,121828619,121828402,121827727	121870450,121868046,121863279,121861679,121859178,121855561,121854820,121853086,121848928,121847506,121845696,121844001,121839696,121835283,121833395,121828728,121828505,121828269	Gene ID= ENSG00000138686.9 TPM= 1.93 Transcript Type= protein_coding
chr4	122152303	122239929	122152303	122239929	+	transcript2772.chr4.nic@KIAA1109	transcript2772.chr4.nic	protein_coding	122152303,122154025,122170615,122173036,122174574,122175850,122186036,122187431,122187895,122190000,122192229,122196635,122197196,122199359,122201009,122207110,122207541,122209159,122209818,122210887,122219340,122220333,122224498,122226707,122229121,122229931,122234773,122238092,122239516	122152584,122154112,122170744,122173152,122174652,122175914,122186222,122187512,122188088,122190079,122192379,122196791,122197274,122199450,122201126,122207265,122207638,122209337,122209924,122211095,122219567,122220470,122224677,122226835,122229240,122230211,122235023,122238350,122239929	Gene ID= ENSG00000138688.15 TPM= 2.9 Transcript Type= NA
chr4	122892644	122922606	122892644	122922606	-	ENST00000304430.9@NUDT6	ENST00000304430.9	protein_coding	122922335,122917501,122912568,122897624,122892644	122922606,122917704,122912623,122897678,122893225	Gene ID= ENSG00000170917.13 TPM= 4.83 Transcript Type= protein_coding
chr4	123396793	123403760	123396793	123403760	+	transcript2787.chr4.nic@SPRY1	transcript2787.chr4.nic	protein_coding	123396793,123397611,123401537	123396932,123398513,123403760	Gene ID= ENSG00000164056.10 TPM= 25.1 Transcript Type= NA
chr4	123399510	123403755	123399510	123403755	+	ENST00000394339.2@SPRY1	ENST00000394339.2	protein_coding	123399510,123401537	123399794,123403755	Gene ID= ENSG00000164056.10 TPM= 3.86 Transcript Type= protein_coding
chr4	123398386	123403760	123398386	123403760	+	ENST00000622283.1@SPRY1	ENST00000622283.1	protein_coding	123398386,123401537	123398513,123403760	Gene ID= ENSG00000164056.10 TPM= 2.9 Transcript Type= protein_coding
chr4	123894789	123930778	123894789	123930778	+	transcript2796.chr4.nnic@LINC01091	transcript2796.chr4.nnic	lincRNA	123894789,123924097,123925184,123930248	123895002,123924200,123925337,123930778	Gene ID= ENSG00000249464.5 TPM= 1.93 Transcript Type= NA
chr4	125316501	125320157	125316501	125320157	+	transcript2801.chr4.nnic@NA	transcript2801.chr4.nnic	NA	125316501	125320157	Gene ID= novel_gene_chr4_2802 TPM= 1.93 Transcript Type= NA
chr4	128061268	128108901	128061268	128108901	+	transcript2824.chr4.nnic@LARP1B	transcript2824.chr4.nnic	protein_coding	128061268,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139,128107883	128062219,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128107313,128108901	Gene ID= ENSG00000138709.17 TPM= 8.69 Transcript Type= NA
chr4	128061335	128108901	128061335	128108901	+	ENST00000394288.7@LARP1B	ENST00000394288.7	protein_coding	128061335,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139,128107883	128061401,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128107313,128108901	Gene ID= ENSG00000138709.17 TPM= 15.44 Transcript Type= protein_coding
chr4	128061348	128108901	128061348	128108901	+	ENST00000432347.6@LARP1B	ENST00000432347.6	protein_coding	128061348,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139	128061401,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128108901	Gene ID= ENSG00000138709.17 TPM= 3.86 Transcript Type= protein_coding
chr4	128809700	128891271	128809700	128891271	+	transcript2840.chr4.nnic@JADE1	transcript2840.chr4.nnic	protein_coding	128809700,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128867856,128871355,128884492,128888986	128809877,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128867973,128871483,128884561,128891271	Gene ID= ENSG00000077684.15 TPM= 2.25 Transcript Type= NA
chr4	128809623	128875224	128809623	128875224	+	ENST00000226319.10@JADE1	ENST00000226319.10	protein_coding	128809623,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128867856,128871355	128809877,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128867973,128875224	Gene ID= ENSG00000077684.15 TPM= 12.87 Transcript Type= protein_coding
chr4	128811270	128875224	128811270	128875224	+	ENST00000610919.4@JADE1	ENST00000610919.4	protein_coding	128811270,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128867856,128871355	128811396,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128867973,128875224	Gene ID= ENSG00000077684.15 TPM= 1.93 Transcript Type= protein_coding
chr4	128809703	128864081	128809703	128864081	+	ENST00000511647.5@JADE1	ENST00000511647.5	protein_coding	128809703,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704	128809877,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128864081	Gene ID= ENSG00000077684.15 TPM= 4.18 Transcript Type= protein_coding
chr4	128809979	128863921	128809979	128863921	+	transcript2853.chr4.nic@JADE1	transcript2853.chr4.nic	protein_coding	128809979,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704	128810291,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128863921	Gene ID= ENSG00000077684.15 TPM= 1.93 Transcript Type= NA
chr4	139015789	139045937	139015789	139045937	+	ENST00000280614.3@NOCT	ENST00000280614.3	protein_coding	139015789,139043074,139044639	139016171,139043343,139045937	Gene ID= ENSG00000151014.5 TPM= 24.13 Transcript Type= protein_coding
chr4	139289938	139301204	139289938	139301204	-	ENST00000505036.5@NDUFC1	ENST00000505036.5	protein_coding	139300964,139295732,139295043,139292530,139289938	139301204,139295960,139295146,139292609,139290092	Gene ID= ENSG00000109390.11 TPM= 49.23 Transcript Type= protein_coding
chr4	139289953	139301420	139289953	139301420	-	ENST00000503453.5@NDUFC1	ENST00000503453.5	protein_coding	139301292,139295732,139295043,139292530,139289953	139301420,139295960,139295146,139292609,139290092	Gene ID= ENSG00000109390.11 TPM= 55.51 Transcript Type= processed_transcript
chr4	139289917	139301210	139289917	139301210	-	ENST00000539002.5@NDUFC1	ENST00000539002.5	protein_coding	139300602,139295732,139295043,139292530,139289917	139301210,139295960,139295146,139292609,139290092	Gene ID= ENSG00000109390.11 TPM= 27.99 Transcript Type= protein_coding
chr4	139289953	139302526	139289953	139302526	-	ENST00000394225.6@NDUFC1	ENST00000394225.6	protein_coding	139302416,139295732,139295043,139292530,139289953	139302526,139295960,139295146,139292609,139290092	Gene ID= ENSG00000109390.11 TPM= 49.71 Transcript Type= processed_transcript
chr4	139301455	139391382	139301455	139391382	+	ENST00000296543.9@NAA15	ENST00000296543.9	protein_coding	139301455,139334174,139336848,139340912,139342826,139344186,139349462,139351191,139351505,139354026,139357386,139359743,139360500,139361724,139370211,139376365,139378756,139384832,139386133,139387884	139301831,139334258,139336952,139341069,139342960,139344339,139349581,139351286,139351611,139354098,139357555,139359895,139360628,139361937,139370404,139376473,139378854,139384978,139386230,139391382	Gene ID= ENSG00000164134.12 TPM= 10.62 Transcript Type= protein_coding
chr4	139665768	139704253	139665768	139704253	+	ENST00000265498.5@MGST2	ENST00000265498.5	protein_coding	139665768,139678543,139695197,139703455,139704016	139666077,139678642,139695267,139703536,139704253	Gene ID= ENSG00000085871.8 TPM= 7.72 Transcript Type= protein_coding
chr4	139665835	139704224	139665835	139704224	+	ENST00000506797.5@MGST2	ENST00000506797.5	protein_coding	139665835,139678543,139703455,139704016	139666077,139678642,139703536,139704224	Gene ID= ENSG00000085871.8 TPM= 1.93 Transcript Type= protein_coding
chr4	140373510	140382556	140373510	140382556	+	ENST00000614192.4@SCOC	ENST00000614192.4	protein_coding	140373510,140379121,140379569,140380962	140373717,140379192,140379652,140382556	Gene ID= ENSG00000153130.17 TPM= 67.09 Transcript Type= protein_coding
chr4	140373536	140382545	140373536	140382545	+	ENST00000506597.1@SCOC	ENST00000506597.1	protein_coding	140373536,140379121,140380962	140373717,140379192,140382545	Gene ID= ENSG00000153130.17 TPM= 3.38 Transcript Type= protein_coding
chr4	140524158	140553770	140524158	140553770	+	ENST00000323570.7@ELMOD2	ENST00000323570.7	protein_coding	140524158,140525420,140527466,140535733,140537412,140540168,140542574,140543453,140550230	140524280,140525570,140527494,140535830,140537541,140540301,140542642,140543586,140553770	Gene ID= ENSG00000179387.9 TPM= 7.72 Transcript Type= protein_coding
chr4	141220877	141234483	141220877	141234483	+	transcript2905.chr4.nic@ZNF330	transcript2905.chr4.nic	protein_coding	141220877,141222366,141224487,141224607,141226767,141229571,141230166,141231439,141232525,141233715	141221108,141222477,141224506,141224677,141226846,141229697,141230270,141231485,141232642,141234483	Gene ID= ENSG00000109445.10 TPM= 3.86 Transcript Type= NA
chr4	141220898	141234697	141220898	141234697	+	transcript2913.chr4.nic@ZNF330	transcript2913.chr4.nic	protein_coding	141220898,141222366,141224487,141224607,141226767,141229571,141230166,141231439,141232525,141233715	141221077,141222491,141224506,141224677,141226846,141229697,141230270,141231485,141232642,141234697	Gene ID= ENSG00000109445.10 TPM= 1.93 Transcript Type= NA
chr4	141220887	141234697	141220887	141234697	+	ENST00000262990.8@ZNF330	ENST00000262990.8	protein_coding	141220887,141222366,141224487,141224607,141226767,141229571,141230166,141231439,141232525,141233715	141221108,141222491,141224506,141224677,141226846,141229697,141230270,141231485,141232642,141234697	Gene ID= ENSG00000109445.10 TPM= 19.31 Transcript Type= protein_coding
chr4	142028745	142405560	142028745	142405560	-	transcript2928.chr4.nnic@INPP4B	transcript2928.chr4.nnic	protein_coding	142405206,142402938,142314712,142305458,142270663,142260492,142237864,142208896,142208425,142202740,142193087,142173632,142160358,142145840,142124588,142123292,142122128,142112542,142108093,142086144,142082031,142028745	142405560,142403054,142314762,142305537,142270774,142260564,142238011,142209026,142208529,142202766,142193195,142173809,142160561,142145996,142124760,142123415,142122245,142112682,142108190,142086256,142082185,142028914	Gene ID= ENSG00000109452.12 TPM= 3.86 Transcript Type= NA
chr4	143184917	143215577	143184917	143215577	+	ENST00000510377.5@USP38	ENST00000510377.5	protein_coding	143184917,143187826,143195716,143197823,143203408,143206033,143209564,143212318,143213581	143186132,143187961,143195845,143197924,143203566,143206226,143209657,143212424,143215577	Gene ID= ENSG00000170185.9 TPM= 9.17 Transcript Type= protein_coding
chr4	143184917	143221487	143184917	143221487	+	transcript2948.chr4.nnic@USP38	transcript2948.chr4.nnic	protein_coding	143184917,143187826,143195716,143203408,143206033,143209564,143212318,143213581,143220295	143186132,143187961,143195845,143203566,143206226,143209657,143212424,143214943,143221487	Gene ID= ENSG00000170185.9 TPM= 21.88 Transcript Type= NA
chr4	143184945	143223830	143184945	143223830	+	ENST00000307017.8@USP38	ENST00000307017.8	protein_coding	143184945,143187826,143195716,143197823,143203408,143206033,143209564,143212318,143213581,143220295	143186132,143187961,143195845,143197924,143203566,143206226,143209657,143212424,143214943,143223830	Gene ID= ENSG00000170185.9 TPM= 10.78 Transcript Type= protein_coding
chr4	143336762	143474568	143336762	143474568	+	ENST00000262995.8@GAB1	ENST00000262995.8	protein_coding	143336762,143415477,143433491,143437999,143439802,143440079,143457680,143459385,143460364,143466103,143469031	143337260,143415771,143433716,143438600,143439887,143440382,143457769,143459478,143460487,143466225,143474568	Gene ID= ENSG00000109458.8 TPM= 1.93 Transcript Type= protein_coding
chr4	143513463	143557486	143513463	143557486	+	ENST00000283131.3@SMARCA5	ENST00000283131.3	protein_coding	143513463,143517355,143521429,143524367,143525451,143526281,143527868,143528583,143530458,143534855,143536452,143538590,143538786,143540363,143543509,143543853,143544737,143545470,143545925,143546776,143547385,143547928,143549997,143553119	143514101,143517429,143521595,143524467,143525551,143526460,143528023,143528714,143530526,143534964,143536678,143538711,143538938,143540495,143543657,143543972,143544847,143545583,143546047,143546908,143547503,143548140,143550104,143557486	Gene ID= ENSG00000153147.5 TPM= 2.9 Transcript Type= protein_coding
chr4	143513463	143554372	143513463	143554372	+	transcript2956.chr4.nnic@SMARCA5	transcript2956.chr4.nnic	protein_coding	143513463,143517355,143521429,143524367,143525451,143526281,143527868,143528583,143530458,143534855,143536452,143538590,143538786,143543509,143543853,143544737,143545470,143545925,143546776,143547385,143547928,143549997,143553119	143514101,143517429,143521595,143524467,143525551,143526460,143528023,143528714,143530526,143534964,143536678,143538711,143538938,143543657,143543972,143544847,143545583,143546047,143546908,143547503,143548140,143550104,143554372	Gene ID= ENSG00000153147.5 TPM= 3.86 Transcript Type= NA
chr4	143559472	143561460	143559472	143561460	+	ENST00000510805.1@GUSBP5	ENST00000510805.1	transcribed_processed_pseudogene	143559472	143561460	Gene ID= ENSG00000236296.8 TPM= 2.9 Transcript Type= processed_transcript
chr4	144995158	145098213	144995158	145098213	-	ENST00000309439.9@ANAPC10	ENST00000309439.9	protein_coding	145098131,145095985,145081660,145064572,144995158	145098213,145096111,145081750,145064692,144995603	Gene ID= ENSG00000164162.13 TPM= 3.86 Transcript Type= protein_coding
chr4	145097932	145129179	145097932	145129179	+	ENST00000296577.8@ABCE1	ENST00000296577.8	protein_coding	145097932,145104386,145105605,145108015,145109132,145110103,145110375,145110968,145112239,145117293,145119932,145121174,145121333,145123021,145123215,145123478,145124990,145127526	145098419,145104515,145105690,145108112,145109249,145110240,145110444,145111064,145112328,145117414,145120153,145121233,145121391,145123131,145123357,145123600,145125101,145129179	Gene ID= ENSG00000164163.10 TPM= 22.2 Transcript Type= protein_coding
chr4	145098315	145128050	145098315	145128050	+	transcript2987.chr4.nnic@ABCE1	transcript2987.chr4.nnic	protein_coding	145098315,145104386,145105605,145108015,145109132,145110103,145110375,145110968,145112239,145117293,145119968,145121174,145121333,145123021,145123215,145123478,145124990,145127526	145098419,145104515,145105690,145108112,145109249,145110240,145110444,145111064,145112328,145117414,145120153,145121233,145121391,145123131,145123357,145123600,145125101,145128050	Gene ID= ENSG00000164163.10 TPM= 1.93 Transcript Type= NA
chr4	145159137	145180591	145159137	145180591	-	transcript2998.chr4.nic@OTUD4	transcript2998.chr4.nic	protein_coding	145179815,145174661,145171670,145165151,145164154,145162640,145159137	145180591,145174744,145171720,145165197,145164226,145162721,145159635	Gene ID= ENSG00000164164.15 TPM= 5.79 Transcript Type= NA
chr4	145137134	145180161	145137134	145180161	-	ENST00000447906.6@OTUD4	ENST00000447906.6	protein_coding	145179815,145174661,145171670,145165151,145164154,145162640,145159503,145155936,145155569,145155411,145152541,145150802,145150513,145146267,145144311,145143946,145143365,145142196,145141379,145139951,145137134	145180161,145174744,145171720,145165197,145164226,145162721,145159635,145155996,145155686,145155475,145152635,145150905,145150699,145146429,145144434,145144001,145143445,145142334,145141639,145139991,145138650	Gene ID= ENSG00000164164.15 TPM= 3.86 Transcript Type= protein_coding
chr4	145481792	145558079	145481792	145558079	+	ENST00000302085.8@SMAD1	ENST00000302085.8	protein_coding	145481792,145514438,145539804,145542582,145546703,145553784,145557791	145482038,145515013,145540061,145542698,145546924,145554040,145558079	Gene ID= ENSG00000170365.9 TPM= 11.58 Transcript Type= protein_coding
chr4	145759286	145761630	145759286	145761630	-	transcript3009.chr4.nnic@NA	transcript3009.chr4.nnic	NA	145759286	145761630	Gene ID= novel_gene_chr4_3010 TPM= 2.9 Transcript Type= NA
chr4	146175685	146191535	146175685	146191535	+	ENST00000296581.10@LSM6	ENST00000296581.10	protein_coding	146175685,146182912,146187274,146189622	146175811,146183015,146187387,146191535	Gene ID= ENSG00000164167.10 TPM= 8.69 Transcript Type= protein_coding
chr4	147617358	147635218	147617358	147635218	+	transcript3022.chr4.nnic@TMEM184C	transcript3022.chr4.nnic	protein_coding	147617358,147623834,147624062,147624804,147628361,147629599,147631393,147632873,147633765,147634169	147618079,147623964,147624098,147625009,147628435,147629692,147631505,147633002,147633936,147635218	Gene ID= ENSG00000164168.7 TPM= 2.9 Transcript Type= NA
chr4	147637785	147684163	147637785	147684163	-	transcript3030.chr4.nnic@PRMT9	transcript3030.chr4.nnic	protein_coding	147683799,147680323,147672959,147670641,147668539,147660846,147657792,147653852,147642787,147638960,147637785	147684163,147680471,147673126,147670743,147668645,147661038,147657975,147654566,147642940,147639082,147638747	Gene ID= ENSG00000164169.12 TPM= 1.93 Transcript Type= NA
chr4	147731755	148072775	147731755	148072775	+	transcript3034.chr4.nic@ARHGAP10	transcript3034.chr4.nic	protein_coding	147731755,147822727,147822896,147847151,147857553,147864846,147866712,147875021,147879232,147881838,147906638,147909732,147913074,147939825,147946617,147955316,147965024,147966680,148023263,148046892,148064416,148071993	147732455,147822822,147822957,147847222,147857654,147864956,147866816,147875150,147879338,147881932,147906719,147909777,147913139,147939899,147946704,147955374,147965129,147966839,148023413,148047051,148064507,148072775	Gene ID= ENSG00000071205.11 TPM= 8.21 Transcript Type= NA
chr4	147732079	148072775	147732079	148072775	+	transcript3036.chr4.nnic@ARHGAP10	transcript3036.chr4.nnic	protein_coding	147732079,147822896,147847151,147857553,147864846,147866712,147875021,147879232,147881838,147906638,147909732,147913074,147939825,147946617,147955316,147965024,147966680,148023263,148046892,148064416,148071993	147732455,147822957,147847222,147857654,147864956,147866816,147875150,147879338,147881932,147906719,147909777,147913139,147939899,147946704,147955374,147965129,147966839,148023413,148047051,148064507,148072775	Gene ID= ENSG00000071205.11 TPM= 4.99 Transcript Type= NA
chr4	147732089	147823784	147732089	147823784	+	transcript3040.chr4.nic@ARHGAP10	transcript3040.chr4.nic	protein_coding	147732089,147822727	147732455,147823784	Gene ID= ENSG00000071205.11 TPM= 1.93 Transcript Type= NA
chr4	147732063	148072780	147732063	148072780	+	ENST00000336498.7@ARHGAP10	ENST00000336498.7	protein_coding	147732063,147822727,147822896,147847151,147857553,147864846,147866712,147875021,147879232,147881838,147906638,147909732,147913074,147939825,147946617,147955316,147965024,147966680,148023263,148046892,148063148,148064416,148071993	147732455,147822822,147822957,147847222,147857654,147864956,147866816,147875150,147879338,147881932,147906719,147909777,147913139,147939899,147946704,147955374,147965129,147966839,148023413,148047051,148063300,148064507,148072780	Gene ID= ENSG00000071205.11 TPM= 25.1 Transcript Type= protein_coding
chr4	151099573	151104652	151099573	151104652	+	ENST00000274065.8@RPS3A	ENST00000274065.8	protein_coding	151099573,151100485,151100975,151102871,151104177,151104472	151099714,151100588,151101162,151103079,151104286,151104652	Gene ID= ENSG00000145425.9 TPM= 1095.63 Transcript Type= protein_coding
chr4	151099624	151104637	151099624	151104637	+	ENST00000509736.5@RPS3A	ENST00000509736.5	protein_coding	151099624,151102871,151104177,151104472	151099714,151103079,151104286,151104637	Gene ID= ENSG00000145425.9 TPM= 9.65 Transcript Type= protein_coding
chr4	151667192	151670502	151667192	151670502	+	transcript3071.chr4.nnic@NA	transcript3071.chr4.nnic	NA	151667192	151670502	Gene ID= novel_gene_chr4_3072 TPM= 9.65 Transcript Type= NA
chr4	151670504	151761023	151670504	151761023	-	ENST00000263985.10@GATB	ENST00000263985.10	protein_coding	151760807,151758772,151719425,151716876,151716009,151707988,151705185,151703851,151701329,151688630,151679813,151672762,151670504	151761023,151758922,151719538,151717074,151716131,151708101,151705269,151703895,151701518,151688763,151679891,151672896,151671302	Gene ID= ENSG00000059691.11 TPM= 2.9 Transcript Type= protein_coding
chr4	151670849	151761018	151670849	151761018	-	transcript3068.chr4.nnic@GATB	transcript3068.chr4.nnic	protein_coding	151760807,151758772,151719425,151716876,151716009,151707988,151705185,151703851,151701329,151688630,151679813,151670849	151761018,151758922,151719538,151717074,151716131,151708101,151705269,151703895,151701518,151688763,151679891,151671302	Gene ID= ENSG00000059691.11 TPM= 1.93 Transcript Type= NA
chr4	152322819	152536109	152322819	152536109	-	transcript3073.chr4.nic@FBXW7	transcript3073.chr4.nic	protein_coding	152535127,152534941,152412480,152411303,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152322819	152536109,152535033,152412529,152411872,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 1.93 Transcript Type= NA
chr4	152322819	152536111	152322819	152536111	-	transcript3077.chr4.nnic@FBXW7	transcript3077.chr4.nnic	protein_coding	152535373,152534941,152411303,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152322819	152536111,152535264,152411872,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 8.69 Transcript Type= NA
chr4	152321259	152536101	152321259	152536101	-	ENST00000281708.8@FBXW7	ENST00000281708.8	protein_coding	152534941,152411303,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321259	152536101,152411872,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 6.44 Transcript Type= protein_coding
chr4	152321263	152352971	152321263	152352971	-	ENST00000263981.9@FBXW7	ENST00000263981.9	protein_coding	152352470,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321263	152352971,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 1.61 Transcript Type= protein_coding
chr4	152321259	152382515	152321259	152382515	-	ENST00000296555.9@FBXW7	ENST00000296555.9	protein_coding	152382189,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321259	152382515,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 8.37 Transcript Type= protein_coding
chr4	152536264	152539263	152536264	152539263	+	ENST00000604157.1@LINC02486	ENST00000604157.1	lincRNA	152536264	152539263	Gene ID= ENSG00000268471.6 TPM= 3.86 Transcript Type= lincRNA
chr4	152779937	152912357	152779937	152912357	+	ENST00000451320.6@ARFIP1	ENST00000451320.6	protein_coding	152779937,152829625,152863606,152870753,152872452,152880963,152882723,152888133,152910064	152780091,152829726,152863714,152870848,152872564,152881184,152882880,152888307,152912357	Gene ID= ENSG00000164144.15 TPM= 3.86 Transcript Type= protein_coding
chr4	152779937	152911909	152779937	152911909	+	ENST00000353617.6@ARFIP1	ENST00000353617.6	protein_coding	152779937,152829625,152863606,152870753,152872452,152880963,152882723,152888133,152910064	152780226,152829726,152863714,152870848,152872564,152881184,152882880,152888307,152911909	Gene ID= ENSG00000164144.15 TPM= 4.83 Transcript Type= protein_coding
chr4	153222496	153336362	153222496	153336362	+	transcript3095.chr4.nic@TRIM2	transcript3095.chr4.nic	protein_coding	153222496,153270335,153275893,153292982,153294305,153295313,153315485,153315832,153322648,153324078,153328530,153334814	153223039,153270519,153276130,153293133,153294485,153296036,153315588,153315999,153322816,153324148,153328670,153336362	Gene ID= ENSG00000109654.14 TPM= 5.79 Transcript Type= NA
chr4	153466349	153636711	153466349	153636711	+	ENST00000409959.7@TMEM131L	ENST00000409959.7	protein_coding	153466349,153467211,153473845,153550073,153555787,153556966,153558258,153580826,153581407,153583190,153583564,153584835,153585458,153586209,153587742,153588890,153591053,153592475,153593799,153596258,153598590,153602152,153602542,153603303,153603802,153612252,153620756,153621683,153622898,153626147,153627605,153632718,153634192,153635432,153636301	153466521,153467281,153473888,153550141,153555910,153557082,153558368,153580903,153581560,153583248,153583672,153584931,153585611,153586379,153587811,153589007,153591194,153592584,153593871,153596385,153598732,153602338,153602727,153603452,153604430,153612400,153620880,153621849,153623083,153626225,153627687,153632838,153634280,153635571,153636711	Gene ID= ENSG00000121210.15 TPM= 3.86 Transcript Type= protein_coding
chr4	153780592	153789120	153780592	153789120	-	ENST00000274063.4@SFRP2	ENST00000274063.4	protein_coding	153788334,153785864,153780592	153789120,153785944,153781755	Gene ID= ENSG00000145423.4 TPM= 3.86 Transcript Type= protein_coding
chr4	154535006	154550435	154535006	154550435	-	ENST00000499023.6@PLRG1	ENST00000499023.6	protein_coding	154550300,154548829,154547711,154547011,154546123,154545836,154544445,154542187,154540785,154540594,154539951,154539105,154537969,154537286,154535006	154550435,154548935,154547853,154547064,154546213,154545923,154544546,154542279,154540934,154540695,154540053,154539213,154538108,154537479,154536744	Gene ID= ENSG00000171566.11 TPM= 2.9 Transcript Type= protein_coding
chr4	154536619	154550397	154536619	154550397	-	ENST00000302078.9@PLRG1	ENST00000302078.9	protein_coding	154550300,154548829,154547711,154547038,154546123,154545836,154544445,154542187,154540785,154540594,154539951,154539105,154537969,154537286,154536619	154550397,154548935,154547853,154547064,154546213,154545923,154544546,154542279,154540934,154540695,154540053,154539213,154538108,154537479,154536744	Gene ID= ENSG00000171566.11 TPM= 2.9 Transcript Type= protein_coding
chr4	155666711	155730432	155666711	155730432	+	ENST00000506455.5@GUCY1A3	ENST00000506455.5	protein_coding	155666711,155667346,155696756,155703932,155708236,155710542,155713098,155717159,155722038,155730030	155666965,155667419,155697122,155703993,155708294,155711251,155713583,155717302,155722192,155730432	Gene ID= ENSG00000164116.16 TPM= 2.41 Transcript Type= protein_coding
chr4	155667663	155730432	155667663	155730432	+	ENST00000513574.1@GUCY1A3	ENST00000513574.1	protein_coding	155667663,155696756,155703932,155708236,155710542,155713098,155717159,155722038,155730030	155667932,155697122,155703993,155708294,155711251,155713583,155717302,155722192,155730432	Gene ID= ENSG00000164116.16 TPM= 6.27 Transcript Type= protein_coding
chr4	155759059	155807591	155759059	155807591	+	ENST00000264424.12@GUCY1B3	ENST00000264424.12	protein_coding	155759059,155759787,155774968,155777524,155789714,155793856,155795341,155796377,155799877,155802342,155803624,155804593,155805103,155806386	155759143,155759860,155775068,155777642,155789911,155794086,155795457,155796510,155800074,155802579,155803764,155804747,155805229,155807591	Gene ID= ENSG00000061918.12 TPM= 7.72 Transcript Type= protein_coding
chr4	155924118	155953917	155924118	155953917	-	ENST00000433477.3@CTSO	ENST00000433477.3	protein_coding	155953713,155943156,155942317,155939371,155937362,155929542,155928336,155924118	155953917,155943264,155942456,155939538,155937483,155929705,155928428,155926070	Gene ID= ENSG00000256043.2 TPM= 5.79 Transcript Type= protein_coding
chr4	157076125	157172090	157076125	157172090	+	ENST00000541722.5@GLRB	ENST00000541722.5	protein_coding	157076125,157077996,157120556,157122330,157136469,157136804,157138809,157143807,157170432	157076297,157078146,157120662,157122397,157136698,157136886,157138949,157143959,157172090	Gene ID= ENSG00000109738.10 TPM= 1.93 Transcript Type= protein_coding
chr4	158666679	158672046	158666679	158672046	-	ENST00000379205.4@C4orf46	ENST00000379205.4	protein_coding	158671616,158666679	158672046,158669768	Gene ID= ENSG00000205208.4 TPM= 1.93 Transcript Type= protein_coding
chr4	158672111	158708661	158672111	158708661	+	transcript3133.chr4.nnic@ETFDH	transcript3133.chr4.nnic	protein_coding	158672111,158680467,158682195,158684592,158685152,158690348,158695497,158697559,158698987,158703423,158706189,158706629,158708364	158672490,158680607,158682424,158684673,158685219,158690425,158695643,158697699,158699130,158703591,158706371,158706850,158708661	Gene ID= ENSG00000171503.11 TPM= 4.83 Transcript Type= NA
chr4	158672303	158708661	158672303	158708661	+	transcript3135.chr4.nnic@ETFDH	transcript3135.chr4.nnic	protein_coding	158672303,158680467,158682195,158684592,158685101,158690348,158695497,158697559,158703423,158706189,158706629,158708364	158672490,158680607,158682424,158684673,158685219,158690425,158695643,158697699,158703591,158706371,158706850,158708661	Gene ID= ENSG00000171503.11 TPM= 3.86 Transcript Type= NA
chr4	158709134	158723442	158709134	158723442	-	transcript3140.chr4.nic@PPID	transcript3140.chr4.nic	protein_coding	158723204,158721343,158719180,158717012,158715562,158715297,158713119,158710762,158710628,158709134	158723442,158721483,158719286,158717200,158715668,158715403,158713260,158710848,158710670,158709824	Gene ID= ENSG00000171497.4 TPM= 5.79 Transcript Type= NA
chr4	158709134	158723396	158709134	158723396	-	ENST00000307720.3@PPID	ENST00000307720.3	protein_coding	158723204,158721343,158719180,158717012,158715562,158715297,158713119,158710762,158710628,158709134	158723396,158721483,158719286,158717200,158715684,158715403,158713260,158710848,158710670,158709824	Gene ID= ENSG00000171497.4 TPM= 196.92 Transcript Type= protein_coding
chr4	158768906	158905710	158768906	158905710	+	transcript3153.chr4.nic@FNIP2	transcript3153.chr4.nic	protein_coding	158768906,158825916,158829079,158831861,158832067,158833528,158833801,158835405,158851321,158859057,158859578,158861342,158861607,158868102,158870313,158891446,158895750,158904466	158769319,158826042,158829225,158831961,158832138,158833628,158833890,158835476,158851450,158859258,158859666,158861488,158861776,158869428,158870469,158891646,158895865,158905710	Gene ID= ENSG00000052795.12 TPM= 37.16 Transcript Type= NA
chr4	158805837	158905710	158805837	158905710	+	transcript3155.chr4.nic@FNIP2	transcript3155.chr4.nic	protein_coding	158805837,158825916,158829079,158831861,158832067,158833528,158833801,158835405,158851321,158859057,158859578,158861342,158861607,158868102,158870313,158891446,158895750,158904466	158806423,158826042,158829225,158831961,158832138,158833628,158833890,158835476,158851450,158859258,158859666,158861488,158861776,158869428,158870469,158891646,158895865,158905710	Gene ID= ENSG00000052795.12 TPM= 12.38 Transcript Type= NA
chr4	158769076	158905710	158769076	158905710	+	transcript3156.chr4.nnic@FNIP2	transcript3156.chr4.nnic	protein_coding	158769076,158825916,158829079,158831861,158832067,158833528,158833801,158835405,158851321,158859578,158861342,158861607,158868102,158870313,158891446,158895750,158904466	158769319,158826042,158829225,158831961,158832138,158833628,158833890,158835476,158851450,158859666,158861488,158861776,158869428,158870469,158891646,158895865,158905710	Gene ID= ENSG00000052795.12 TPM= 9.46 Transcript Type= NA
chr4	158769017	158879752	158769017	158879752	+	transcript3160.chr4.nnic@FNIP2	transcript3160.chr4.nnic	protein_coding	158769017,158825916,158829079,158831861,158832067,158833528,158833801,158835405,158851321,158859057,158859578,158861342,158861607,158868102,158870313,158879566	158769319,158826042,158829225,158831961,158832138,158833628,158833890,158835476,158851450,158859258,158859666,158861488,158861776,158869428,158870469,158879752	Gene ID= ENSG00000052795.12 TPM= 4.7 Transcript Type= NA
chr4	158769018	158872975	158769018	158872975	+	transcript3164.chr4.nic@FNIP2	transcript3164.chr4.nic	protein_coding	158769018,158825916,158829079,158831861,158832067,158833528,158833801,158835405,158851321,158859057,158859578,158861342,158861607,158868102,158870313	158769319,158826042,158829225,158831961,158832138,158833628,158833890,158835476,158851450,158859258,158859666,158861488,158861776,158869428,158872975	Gene ID= ENSG00000052795.12 TPM= 3.74 Transcript Type= NA
chr4	158841752	158905710	158841752	158905710	+	transcript3169.chr4.nnic@FNIP2	transcript3169.chr4.nnic	protein_coding	158841752,158851321,158859057,158859578,158861342,158861607,158868102,158870313,158891446,158895750,158904466	158841952,158851450,158859258,158859666,158861488,158861776,158869428,158870469,158891646,158895865,158905710	Gene ID= ENSG00000052795.12 TPM= 27.35 Transcript Type= NA
chr4	158866223	158869297	158866223	158869297	-	transcript3182.chr4.nnic@NA	transcript3182.chr4.nnic	NA	158866223	158869297	Gene ID= novel_gene_chr4_3183 TPM= 4.83 Transcript Type= NA
chr4	163128669	163166921	163128669	163166921	-	ENST00000274054.2@NAF1	ENST00000274054.2	protein_coding	163166363,163164217,163148341,163145782,163140223,163137199,163133154,163128669	163166921,163164391,163148434,163145864,163140383,163137250,163133256,163129348	Gene ID= ENSG00000145414.8 TPM= 3.86 Transcript Type= protein_coding
chr4	163494461	163520539	163494461	163520539	+	ENST00000358572.9@TMA16	ENST00000358572.9	protein_coding	163494461,163507033,163512822,163514074,163515313,163517434,163519334	163494804,163507145,163512859,163514158,163515461,163517476,163520539	Gene ID= ENSG00000198498.9 TPM= 8.69 Transcript Type= protein_coding
chr4	165070608	165112919	165070608	165112919	-	ENST00000306480.10@TMEM192	ENST00000306480.10	protein_coding	165112747,165102950,165100628,165088468,165085586,165070608	165112919,165103096,165100892,165088602,165085688,165079796	Gene ID= ENSG00000170088.13 TPM= 2.9 Transcript Type= protein_coding
chr4	165207798	165323153	165207798	165323153	+	transcript3212.chr4.nic@KLHL2	transcript3212.chr4.nic	protein_coding	165207798,165219934,165223938,165228807,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032	165207902,165220059,165224057,165228913,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323153	Gene ID= ENSG00000109466.13 TPM= 1.93 Transcript Type= NA
chr4	165207650	165323153	165207650	165323153	+	transcript3217.chr4.nic@KLHL2	transcript3217.chr4.nic	protein_coding	165207650,165219934,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032	165207902,165220059,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323153	Gene ID= ENSG00000109466.13 TPM= 1.93 Transcript Type= NA
chr4	165207618	165323153	165207618	165323153	+	ENST00000226725.10@KLHL2	ENST00000226725.10	protein_coding	165207618,165219934,165228807,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032	165207902,165220059,165228913,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323153	Gene ID= ENSG00000109466.13 TPM= 6.76 Transcript Type= protein_coding
chr4	165327623	165343160	165327623	165343160	+	ENST00000261507.10@MSMO1	ENST00000261507.10	protein_coding	165327623,165333340,165337789,165338652,165340221,165341751	165327764,165333625,165337937,165338778,165340375,165343160	Gene ID= ENSG00000052802.12 TPM= 3.86 Transcript Type= protein_coding
chr4	165378942	165498320	165378942	165498320	+	ENST00000402744.8@CPE	ENST00000402744.8	protein_coding	165378942,165464390,165467688,165482242,165484422,165487438,165493171,165495559,165497512	165379528,165464586,165467855,165482359,165484604,165487577,165493270,165495677,165498320	Gene ID= ENSG00000109472.13 TPM= 27.99 Transcript Type= protein_coding
chr4	166733387	167234549	166733387	167234549	-	ENST00000357545.8@SPOCK3	ENST00000357545.8	protein_coding	167234450,167233985,167062492,167000349,166912620,166889130,166792170,166754508,166741997,166737467,166733387	167234549,167234173,167062537,167000463,166912743,166889244,166792289,166754729,166742059,166737604,166735090	Gene ID= ENSG00000196104.10 TPM= 1.93 Transcript Type= protein_coding
chr4	168832034	168928457	168832034	168928457	+	transcript3236.chr4.nic@PALLD	transcript3236.chr4.nic	protein_coding	168832034,168877723,168890922,168894579,168896549,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168925233,168926213	168832171,168878394,168891057,168894677,168896599,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168925278,168928457	Gene ID= ENSG00000129116.17 TPM= 40.39 Transcript Type= NA
chr4	168832095	168928457	168832095	168928457	+	transcript3243.chr4.nic@PALLD	transcript3243.chr4.nic	protein_coding	168832095,168877723,168890922,168894579,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168925233,168926213	168832171,168878394,168891057,168894677,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168925278,168928457	Gene ID= ENSG00000129116.17 TPM= 13.83 Transcript Type= NA
chr4	168832034	168926505	168832034	168926505	+	transcript3244.chr4.nnic@PALLD	transcript3244.chr4.nnic	protein_coding	168832034,168877723,168890922,168896549,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168925233,168926213	168832171,168878394,168891057,168896599,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168925278,168926505	Gene ID= ENSG00000129116.17 TPM= 5.15 Transcript Type= NA
chr4	168832034	168928457	168832034	168928457	+	transcript3248.chr4.nic@PALLD	transcript3248.chr4.nic	protein_coding	168832034,168890922,168894579,168896549,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168925233,168926213	168832171,168891057,168894677,168896599,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168925278,168928457	Gene ID= ENSG00000129116.17 TPM= 18.28 Transcript Type= NA
chr4	168832041	168928445	168832041	168928445	+	ENST00000507735.5@PALLD	ENST00000507735.5	protein_coding	168832041,168877723,168890922,168894579,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168926213	168832171,168878394,168891057,168894677,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168928445	Gene ID= ENSG00000129116.17 TPM= 6.76 Transcript Type= protein_coding
chr4	168987594	169010296	168987594	169010296	-	transcript3270.chr4.nnic@CBR4	transcript3270.chr4.nnic	protein_coding	169009948,169007636,169006755,169002071,168998202,168987594	169010296,169007756,169006891,169002205,168998285,168990328	Gene ID= ENSG00000145439.11 TPM= 3.86 Transcript Type= NA
chr4	168987590	169010258	168987590	169010258	-	ENST00000306193.7@CBR4	ENST00000306193.7	protein_coding	169009948,169007636,169006755,169002071,168987590	169010258,169007756,169006891,169002205,168990328	Gene ID= ENSG00000145439.11 TPM= 11.58 Transcript Type= protein_coding
chr4	169116269	169271014	169116269	169271014	-	transcript3285.chr4.nic@SH3RF1	transcript3285.chr4.nic	protein_coding	169270859,169268820,169156404,169155480,169136318,169130046,169122100,169120819,169117523,169116269	169271014,169269307,169156679,169155575,169136620,169130156,169122266,169120989,169117782,169116630	Gene ID= ENSG00000154447.14 TPM= 14.48 Transcript Type= NA
chr4	169620521	169723673	169620521	169723673	+	ENST00000513761.5@CLCN3	ENST00000513761.5	protein_coding	169620521,169635913,169680050,169687658,169689043,169690530,169692114,169695612,169697189,169703998,169706868,169713079,169719907	169621063,169636088,169680207,169687757,169689230,169690652,169692320,169695692,169697734,169704184,169707266,169713295,169723673	Gene ID= ENSG00000109572.13 TPM= 3.86 Transcript Type= protein_coding
chr4	169729465	169757953	169729465	169757953	-	ENST00000393381.2@HPF1	ENST00000393381.2	protein_coding	169757830,169753676,169750536,169748744,169741957,169737660,169731704,169729465	169757953,169753835,169750725,169748842,169742107,169737747,169731876,169729709	Gene ID= ENSG00000056050.6 TPM= 39.58 Transcript Type= protein_coding
chr4	173331695	173335125	173331695	173335125	-	ENST00000296503.9@HMGB2	ENST00000296503.9	protein_coding	173334272,173333500,173333069,173332821,173331695	173335125,173333669,173333214,173332995,173332238	Gene ID= ENSG00000164104.11 TPM= 9.65 Transcript Type= protein_coding
chr4	173370943	173377532	173370943	173377532	+	ENST00000296504.3@SAP30	ENST00000296504.3	protein_coding	173370943,173373390,173373939,173377205	173371497,173373515,173374037,173377532	Gene ID= ENSG00000164105.3 TPM= 16.41 Transcript Type= protein_coding
chr4	174236658	174284264	174236658	174284264	-	ENST00000393674.6@FBXO8	ENST00000393674.6	protein_coding	174283410,174262764,174259699,174241100,174238994,174236658	174284264,174263100,174259825,174241218,174239190,174237599	Gene ID= ENSG00000164117.13 TPM= 2.9 Transcript Type= protein_coding
chr4	174283333	174320330	174283333	174320330	+	transcript3319.chr4.nic@CEP44	transcript3319.chr4.nic	protein_coding	174283333,174299072,174302039,174303703,174304247,174308689,174309850,174310783,174316166,174316530,174317335	174283943,174299210,174302186,174303849,174304369,174308859,174310056,174310858,174316290,174316567,174320330	Gene ID= ENSG00000164118.12 TPM= 1.93 Transcript Type= NA
chr4	176224222	176269230	176224222	176269230	-	transcript3339.chr4.nic@ASB5	transcript3339.chr4.nic	protein_coding	176268913,176224222	176269230,176225341	Gene ID= ENSG00000164122.8 TPM= 3.86 Transcript Type= NA
chr4	176213673	176269222	176213673	176269222	-	ENST00000296525.7@ASB5	ENST00000296525.7	protein_coding	176268913,176225262,176222313,176221450,176221155,176216818,176213673	176269222,176225341,176222420,176221600,176221289,176217009,176215727	Gene ID= ENSG00000164122.8 TPM= 168.93 Transcript Type= protein_coding
chr4	176261583	176263071	176261583	176263071	-	transcript3344.chr4.nnic@NA	transcript3344.chr4.nnic	NA	176261583	176263071	Gene ID= novel_gene_chr4_3345 TPM= 1.93 Transcript Type= NA
chr4	176264903	176269220	176264903	176269220	-	transcript3340.chr4.nnic@NA	transcript3340.chr4.nnic	NA	176264903	176269220	Gene ID= novel_gene_chr4_3341 TPM= 2.9 Transcript Type= NA
chr4	176319894	176332241	176319894	176332241	+	transcript3348.chr4.nnic@SPCS3	transcript3348.chr4.nnic	protein_coding	176319894,176322170,176324181,176327162,176328198,176331193	176320219,176322243,176324257,176327277,176331072,176332241	Gene ID= ENSG00000129128.12 TPM= 12.55 Transcript Type= NA
chr4	176319964	176332245	176319964	176332245	+	ENST00000503362.1@SPCS3	ENST00000503362.1	protein_coding	176319964,176322170,176324181,176327162,176328198	176320219,176322243,176324257,176327277,176332245	Gene ID= ENSG00000129128.12 TPM= 40.54 Transcript Type= protein_coding
chr4	177430770	177442503	177430770	177442503	-	ENST00000264595.6@AGA	ENST00000264595.6	protein_coding	177442249,177440273,177439576,177438745,177437405,177436276,177434382,177433214,177430770	177442503,177440426,177439688,177438857,177437519,177436351,177434489,177433347,177431808	Gene ID= ENSG00000038002.8 TPM= 3.86 Transcript Type= protein_coding
chr4	182243429	182803024	182243429	182803024	+	ENST00000511685.5@TENM3	ENST00000511685.5	protein_coding	182243429,182323946,182346651,182600924,182628651,182653771,182673005,182679666,182680248,182680543,182681814,182688166,182714087,182728965,182730200,182730878,182736808,182738401,182743170,182751800,182753450,182754385,182773472,182774918,182789093,182792274,182796637,182799596	182243476,182324252,182346929,182601161,182628889,182653893,182673219,182679876,182680349,182680737,182682014,182688351,182714233,182729181,182730319,182731139,182737075,182738544,182743419,182752032,182753604,182755259,182773647,182775153,182789389,182793885,182796767,182803024	Gene ID= ENSG00000218336.8 TPM= 1.93 Transcript Type= protein_coding
chr4	182890104	182917556	182890104	182917556	-	transcript3373.chr4.nic@DCTD	transcript3373.chr4.nic	protein_coding	182917311,182916419,182915461,182914923,182894489,182893031,182890104	182917556,182916539,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 4.83 Transcript Type= NA
chr4	182890255	182917594	182890255	182917594	-	ENST00000438320.6@DCTD	ENST00000438320.6	protein_coding	182917311,182915461,182914923,182894489,182893031,182890255	182917594,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 3.86 Transcript Type= protein_coding
chr4	182890060	182917369	182890060	182917369	-	ENST00000500813.6@DCTD	ENST00000500813.6	protein_coding	182917288,182915461,182894489,182893031,182890060	182917369,182915575,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr4	182890104	182917379	182890104	182917379	-	ENST00000357067.7@DCTD	ENST00000357067.7	protein_coding	182917288,182915461,182914923,182894489,182893031,182890104	182917379,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 38.61 Transcript Type= protein_coding
chr4	183444591	183448198	183444591	183448198	+	ENST00000504169.1@CDKN2AIP	ENST00000504169.1	protein_coding	183444591,183445535,183446088	183445069,183445665,183448198	Gene ID= ENSG00000168564.5 TPM= 4.83 Transcript Type= protein_coding
chr4	183444635	183448198	183444635	183448198	+	ENST00000302350.4@CDKN2AIP	ENST00000302350.4	protein_coding	183444635,183445535,183446088	183445069,183445634,183448198	Gene ID= ENSG00000168564.5 TPM= 5.79 Transcript Type= protein_coding
chr4	183506082	183510643	183506082	183510643	+	ENST00000412117.1@ING2	ENST00000412117.1	protein_coding	183506082,183510282	183506318,183510643	Gene ID= ENSG00000168556.6 TPM= 1.93 Transcript Type= protein_coding
chr4	183639635	183659225	183639635	183659225	-	ENST00000326397.9@RWDD4	ENST00000326397.9	protein_coding	183658929,183655881,183651218,183650984,183649451,183646488,183646351,183639635	183659225,183655961,183651327,183651131,183649568,183646537,183646353,183641468	Gene ID= ENSG00000182552.14 TPM= 5.15 Transcript Type= protein_coding
chr4	183639635	183659213	183639635	183659213	-	transcript3410.chr4.nnic@RWDD4	transcript3410.chr4.nnic	protein_coding	183658929,183651218,183650984,183649451,183646488,183646351,183639635	183659213,183651327,183651131,183649568,183646537,183646353,183641468	Gene ID= ENSG00000182552.14 TPM= 2.25 Transcript Type= NA
chr4	183639636	183659178	183639636	183659178	-	ENST00000327570.13@RWDD4	ENST00000327570.13	protein_coding	183658929,183655881,183651218,183650984,183649451,183646488,183639636	183659178,183655961,183651327,183651131,183649568,183646537,183641468	Gene ID= ENSG00000182552.14 TPM= 43.76 Transcript Type= protein_coding
chr4	183659267	183713592	183659267	183713592	+	ENST00000334690.10@TRAPPC11	ENST00000334690.10	protein_coding	183659267,183663847,183666257,183667060,183668003,183674713,183675164,183677458,183679353,183680120,183682732,183683975,183684145,183684305,183684696,183685084,183685271,183686618,183691316,183692960,183693589,183693917,183694604,183697503,183697679,183701697,183704979,183706807,183708407,183712600	183659447,183664071,183666426,183667130,183668117,183674812,183675237,183677554,183679486,183680267,183682825,183684054,183684223,183684359,183684841,183685145,183685403,183686748,183691471,183693147,183693737,183694038,183694723,183697568,183697835,183701808,183705070,183706940,183708574,183713592	Gene ID= ENSG00000168538.15 TPM= 12.07 Transcript Type= protein_coding
chr4	183659295	183713591	183659295	183713591	+	transcript3433.chr4.nnic@TRAPPC11	transcript3433.chr4.nnic	protein_coding	183659295,183663847,183666257,183667060,183668003,183674713,183675164,183677458,183679353,183680120,183683975,183684145,183684305,183684696,183685084,183685271,183686618,183691316,183692960,183693589,183693917,183694604,183697503,183697679,183701697,183704979,183706807,183708407,183712600	183659447,183664071,183666426,183667130,183668117,183674812,183675237,183677554,183679486,183680267,183684054,183684223,183684359,183684841,183685145,183685403,183686748,183691471,183693147,183693737,183694038,183694723,183697568,183697835,183701808,183705070,183706940,183708574,183713591	Gene ID= ENSG00000168538.15 TPM= 6.27 Transcript Type= NA
chr4	184387713	184474580	184387713	184474580	-	ENST00000393593.7@IRF2	ENST00000393593.7	protein_coding	184474379,184428978,184419469,184418532,184418167,184408158,184398915,184390703,184387713	184474580,184429070,184419568,184418708,184418213,184408275,184399079,184390749,184389066	Gene ID= ENSG00000168310.10 TPM= 5.79 Transcript Type= protein_coding
chr4	184471922	184473612	184471922	184473612	-	transcript3439.chr4.nnic@NA	transcript3439.chr4.nnic	NA	184471922	184473612	Gene ID= novel_gene_chr4_3440 TPM= 2.9 Transcript Type= NA
chr4	184474364	184474924	184474364	184474924	-	transcript3441.chr4.nnic@NA	transcript3441.chr4.nnic	NA	184474364	184474924	Gene ID= novel_gene_chr4_3442 TPM= 1.93 Transcript Type= NA
chr4	184474802	184477304	184474802	184477304	+	ENST00000605834.1@AC099343.3	ENST00000605834.1	lincRNA	184474802	184477304	Gene ID= ENSG00000271646.1 TPM= 2.9 Transcript Type= lincRNA
chr4	184627696	184649475	184627696	184649475	-	ENST00000308394.8@CASP3	ENST00000308394.8	protein_coding	184649395,184648465,184638401,184635294,184632268,184631765,184631037,184627696	184649475,184648631,184638468,184635418,184632396,184631940,184631157,184629501	Gene ID= ENSG00000164305.18 TPM= 20.75 Transcript Type= protein_coding
chr4	184627696	184649509	184627696	184649509	-	ENST00000523916.5@CASP3	ENST00000523916.5	protein_coding	184649395,184638401,184635294,184632268,184631765,184631037,184627696	184649509,184638468,184635418,184632396,184631940,184631157,184629501	Gene ID= ENSG00000164305.18 TPM= 6.27 Transcript Type= protein_coding
chr4	184649613	184694952	184649613	184694952	+	ENST00000314970.10@PRIMPOL	ENST00000314970.10	protein_coding	184649613,184652023,184657082,184659340,184661774,184665917,184672173,184678232,184682248,184685409,184685576,184691499,184691666,184694522	184649908,184652100,184657320,184659437,184661903,184666064,184672460,184678394,184682336,184685498,184685684,184691581,184691712,184694952	Gene ID= ENSG00000164306.10 TPM= 4.83 Transcript Type= protein_coding
chr4	184755595	184826119	184755595	184826119	-	ENST00000454703.6@ACSL1	ENST00000454703.6	protein_coding	184825916,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755595	184826119,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 43.08 Transcript Type= protein_coding
chr4	184755595	184805501	184755595	184805501	-	transcript3542.chr4.nnic@ACSL1	transcript3542.chr4.nnic	protein_coding	184805440,184803320,184788617,184783927,184780332,184755595	184805501,184803546,184788731,184783991,184780433,184757238	Gene ID= ENSG00000151726.13 TPM= 49.23 Transcript Type= NA
chr4	184755601	184826094	184755601	184826094	-	ENST00000281455.6@ACSL1	ENST00000281455.6	protein_coding	184825916,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755601	184826094,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 494.47 Transcript Type= protein_coding
chr4	185143241	185150382	185143241	185150382	+	ENST00000281456.10@SLC25A4	ENST00000281456.10	protein_coding	185143241,185144764,185145759,185146814	185143483,185145250,185145899,185150382	Gene ID= ENSG00000151729.10 TPM= 46.33 Transcript Type= protein_coding
chr4	185143278	185147241	185143278	185147241	+	ENST00000491736.1@SLC25A4	ENST00000491736.1	protein_coding	185143278,185144764,185145355,185146814	185143483,185145250,185145899,185147241	Gene ID= ENSG00000151729.10 TPM= 70.47 Transcript Type= nonsense_mediated_decay
chr4	185159665	185204001	185159665	185204001	-	ENST00000458385.6@CFAP97	ENST00000458385.6	protein_coding	185203898,185190143,185175786,185164029,185159665	185204001,185191212,185176051,185164179,185162925	Gene ID= ENSG00000164323.12 TPM= 5.79 Transcript Type= protein_coding
chr4	185209565	185363966	185209565	185363966	+	transcript3617.chr4.nic@SNX25	transcript3617.chr4.nic	protein_coding	185209565,185247294,185258848,185264438,185266969,185288012,185310635,185320733,185323528,185332595,185339379,185341976,185346537,185351445,185353485,185357671,185361924,185362611,185363385	185210255,185247378,185259064,185264498,185267155,185288082,185310816,185320864,185323800,185332759,185339510,185342116,185346650,185351609,185353602,185357737,185362105,185362711,185363966	Gene ID= ENSG00000109762.15 TPM= 1.93 Transcript Type= NA
chr4	185209565	185362335	185209565	185362335	+	transcript3621.chr4.nnic@SNX25	transcript3621.chr4.nnic	protein_coding	185209565,185247294,185258848,185264438,185266969,185288012,185310635,185320733,185323528,185332595,185339379,185341976,185346537,185351445,185353485,185357671,185361924,185362192	185210255,185247378,185259064,185264610,185267155,185288082,185310816,185320864,185323800,185332759,185339510,185342116,185346650,185351609,185353602,185357737,185362105,185362335	Gene ID= ENSG00000109762.15 TPM= 1.93 Transcript Type= NA
chr4	185209565	185363966	185209565	185363966	+	transcript3622.chr4.nnic@SNX25	transcript3622.chr4.nnic	protein_coding	185209565,185247294,185258848,185264438,185266969,185288012,185310635,185320733,185323528,185339379,185341976,185346537,185351445,185353485,185357671,185361924,185362611,185363385	185210255,185247378,185259064,185264610,185267155,185288082,185310816,185320864,185323800,185339510,185342116,185346650,185351609,185353602,185357737,185362105,185362711,185363966	Gene ID= ENSG00000109762.15 TPM= 1.93 Transcript Type= NA
chr4	185209565	185363966	185209565	185363966	+	transcript3626.chr4.nnic@SNX25	transcript3626.chr4.nnic	protein_coding	185209565,185247294,185258848,185264438,185266969,185288012,185310635,185320733,185323528,185341976,185346537,185351445,185353485,185357671,185361924,185362611,185363385	185210255,185247378,185259064,185264610,185267155,185288082,185310816,185320864,185323800,185342116,185346650,185351609,185353602,185357737,185362105,185362711,185363966	Gene ID= ENSG00000109762.15 TPM= 1.93 Transcript Type= NA
chr4	185209565	185311969	185209565	185311969	+	transcript3629.chr4.nnic@SNX25	transcript3629.chr4.nnic	protein_coding	185209565,185247294,185258848,185264438,185266969,185288012,185310635,185311714	185210255,185247378,185259064,185264610,185267155,185288082,185310816,185311969	Gene ID= ENSG00000109762.15 TPM= 2.9 Transcript Type= NA
chr4	185396012	185400241	185396012	185400241	+	transcript3653.chr4.nic@ANKRD37	transcript3653.chr4.nic	protein_coding	185396012,185396832,185397150,185398937,185399570,185400017	185396424,185396950,185397302,185399028,185399773,185400241	Gene ID= ENSG00000186352.8 TPM= 1.93 Transcript Type= NA
chr4	185396053	185400241	185396053	185400241	+	transcript3655.chr4.nic@ANKRD37	transcript3655.chr4.nic	protein_coding	185396053,185397150,185398937,185399570,185400017	185396424,185397302,185399028,185399773,185400241	Gene ID= ENSG00000186352.8 TPM= 2.9 Transcript Type= NA
chr4	185396484	185400241	185396484	185400241	+	ENST00000335174.5@ANKRD37	ENST00000335174.5	protein_coding	185396484,185397150,185398937,185399570,185400017	185396950,185397302,185399028,185399773,185400241	Gene ID= ENSG00000186352.8 TPM= 4.83 Transcript Type= protein_coding
chr4	185399536	185425979	185399536	185425979	-	transcript3636.chr4.nic@UFSP2	transcript3636.chr4.nic	protein_coding	185425866,185422485,185418587,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185399536	185425979,185422563,185418770,185418507,185415867,185415347,185413872,185408435,185408060,185405856,185403618,185402344	Gene ID= ENSG00000109775.10 TPM= 2.9 Transcript Type= NA
chr4	185400289	185425985	185400289	185425985	-	ENST00000264689.10@UFSP2	ENST00000264689.10	protein_coding	185425866,185422485,185418587,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185400289	185425985,185422563,185418770,185418507,185415867,185415347,185413872,185408435,185408060,185405856,185403618,185400478	Gene ID= ENSG00000109775.10 TPM= 50.2 Transcript Type= protein_coding
chr4	185399540	185425979	185399540	185425979	-	ENST00000514247.5@UFSP2	ENST00000514247.5	protein_coding	185425866,185422485,185418612,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185399540	185425979,185422563,185418770,185418507,185415867,185415347,185413872,185408435,185408060,185405856,185403618,185400478	Gene ID= ENSG00000109775.10 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr4	185501697	185535508	185501697	185535508	-	ENST00000284770.9@PDLIM3	ENST00000284770.9	protein_coding	185535342,185525020,185523362,185514270,185508299,185506522,185504475,185501697	185535508,185525171,185523446,185514337,185508562,185506652,185504586,185502483	Gene ID= ENSG00000154553.13 TPM= 39.38 Transcript Type= protein_coding
chr4	185512094	185535491	185512094	185535491	-	ENST00000504011.5@PDLIM3	ENST00000504011.5	protein_coding	185535342,185525020,185523362,185514703,185512094	185535491,185525171,185523446,185514890,185514337	Gene ID= ENSG00000154553.13 TPM= 29.92 Transcript Type= retained_intron
chr4	185509920	185513149	185509920	185513149	-	transcript3708.chr4.nnic@NA	transcript3708.chr4.nnic	NA	185509920	185513149	Gene ID= novel_gene_chr4_3709 TPM= 28.96 Transcript Type= NA
chr4	185575430	185578502	185575430	185578502	-	transcript3732.chr4.nnic@NA	transcript3732.chr4.nnic	NA	185578372,185575430	185578502,185577840	Gene ID= novel_gene_chr4_3733 TPM= 2.9 Transcript Type= NA
chr4	185575963	185578502	185575963	185578502	-	transcript3734.chr4.nnic@NA	transcript3734.chr4.nnic	NA	185578372,185575963	185578502,185577840	Gene ID= novel_gene_chr4_3733 TPM= 4.83 Transcript Type= NA
chr4	185576621	185578502	185576621	185578502	-	transcript3737.chr4.nnic@NA	transcript3737.chr4.nnic	NA	185578372,185576621	185578502,185577840	Gene ID= novel_gene_chr4_3733 TPM= 1.93 Transcript Type= NA
chr4	186144811	186158920	186144811	186158920	+	transcript3754.chr4.nic@FAM149A	transcript3754.chr4.nic	protein_coding	186144811,186149173,186149566,186151903,186153645,186154468,186156000,186157565,186157889	186145112,186149283,186149704,186152045,186153770,186154638,186156190,186157719,186158920	Gene ID= ENSG00000109794.13 TPM= 1.93 Transcript Type= NA
chr4	186144927	186172142	186144927	186172142	+	ENST00000514153.5@FAM149A	ENST00000514153.5	protein_coding	186144927,186149173,186149593,186151903,186153645,186154468,186156000,186157565,186162845,186163424,186165344,186166968,186167181,186171914	186145112,186149283,186149704,186152045,186153770,186154638,186156190,186157719,186162948,186163633,186165464,186167096,186167262,186172142	Gene ID= ENSG00000109794.13 TPM= 1.93 Transcript Type= protein_coding
chr4	186191352	186193340	186191352	186193340	+	transcript3758.chr4.nnic@NA	transcript3758.chr4.nnic	NA	186191352	186193340	Gene ID= novel_gene_chr4_3759 TPM= 6.76 Transcript Type= NA
chr4	186204837	186213456	186204837	186213456	+	ENST00000502665.1@CYP4V2	ENST00000502665.1	protein_coding	186204837,186205200,186208865,186209093,186210469	186205058,186205302,186208999,186209272,186213456	Gene ID= ENSG00000145476.15 TPM= 1.93 Transcript Type= processed_transcript
chr4	189940788	189963204	189940788	189963204	+	ENST00000226798.8@FRG1	ENST00000226798.8	protein_coding	189940788,189943202,189952162,189953068,189955037,189957398,189960748,189961822,189963093	189941071,189943272,189952287,189953125,189955151,189957502,189960839,189961932,189963204	Gene ID= ENSG00000109536.11 TPM= 24.13 Transcript Type= protein_coding
chr5	192720	194457	192720	194457	-	transcript53.chr5.nnic@NA	transcript53.chr5.nnic	NA	194362,192720	194457,192988	Gene ID= novel_gene_chr5_54 TPM= 6.76 Transcript Type= NA
chr5	195778	196341	195778	196341	+	ENST00000563761.1@AC021087.4	ENST00000563761.1	sense_overlapping	195778	196341	Gene ID= ENSG00000261434.1 TPM= 1.93 Transcript Type= sense_overlapping
chr5	204961	218166	204961	218166	-	transcript36.chr5.nnic@CCDC127	transcript36.chr5.nnic	protein_coding	218093,216729,208926,204961	218166,216859,208987,205958	Gene ID= ENSG00000164366.3 TPM= 6.76 Transcript Type= NA
chr5	196871	218215	196871	218215	-	ENST00000296824.3@CCDC127	ENST00000296824.3	protein_coding	218093,216729,196871	218215,216859,205958	Gene ID= ENSG00000164366.3 TPM= 4.83 Transcript Type= protein_coding
chr5	218241	256700	218241	256700	+	ENST00000264932.10@SDHA	ENST00000264932.10	protein_coding	218241,223482,224360,225419,225883,228185,230876,233477,235144,236428,240358,250992,251338,254393,256334	218418,223568,224521,225562,226047,228333,231000,233645,235339,236599,240476,251103,251468,254506,256700	Gene ID= ENSG00000073578.16 TPM= 718.03 Transcript Type= protein_coding
chr5	218303	256682	218303	256682	+	ENST00000504309.5@SDHA	ENST00000504309.5	protein_coding	218303,223482,224360,225419,225883,228185,230876,233477,235144,236428,240358,254393,256334	218418,223568,224521,225562,226047,228333,231000,233645,235339,236599,240476,254506,256682	Gene ID= ENSG00000073578.16 TPM= 9.01 Transcript Type= protein_coding
chr5	218318	256679	218318	256679	+	ENST00000510361.5@SDHA	ENST00000510361.5	protein_coding	218318,223482,224360,225883,228185,230876,233477,235144,236428,240358,250992,251338,254393,256334	218418,223568,224521,226047,228333,231000,233645,235339,236599,240476,251103,251468,254506,256679	Gene ID= ENSG00000073578.16 TPM= 28.16 Transcript Type= protein_coding
chr5	218371	235524	218371	235524	+	ENST00000504824.5@SDHA	ENST00000504824.5	protein_coding	218371,223482,224360,225419,225883,228185,230876,233477,235144	218418,223568,224521,225562,226047,228333,231000,233645,235524	Gene ID= ENSG00000073578.16 TPM= 1.93 Transcript Type= retained_intron
chr5	256808	259560	256808	259560	-	transcript55.chr5.nnic@NA	transcript55.chr5.nnic	NA	256808	259560	Gene ID= novel_gene_chr5_56 TPM= 11.58 Transcript Type= NA
chr5	256818	259336	256818	259336	-	transcript39.chr5.nnic@NA	transcript39.chr5.nnic	NA	259181,258294,257715,256818	259336,258389,257860,257497	Gene ID= novel_gene_chr5_40 TPM= 2.9 Transcript Type= NA
chr5	271643	314954	271643	314954	+	transcript58.chr5.nic@PDCD6	transcript58.chr5.nic	protein_coding	271643,272711,304177,306602,311293,313701,314417	271821,272772,304221,306760,311402,313850,314954	Gene ID= ENSG00000249915.7 TPM= 2.9 Transcript Type= NA
chr5	271621	314974	271621	314974	+	ENST00000264933.8@PDCD6	ENST00000264933.8	protein_coding	271621,272711,304177,306602,311293,314417	271821,272772,304221,306760,311402,314974	Gene ID= ENSG00000249915.7 TPM= 38.61 Transcript Type= protein_coding
chr5	271657	276940	271657	276940	+	ENST00000509581.5@PDCD6	ENST00000509581.5	protein_coding	271657,272711,276012	271821,272772,276940	Gene ID= ENSG00000249915.7 TPM= 1.93 Transcript Type= protein_coding
chr5	309984	314974	309984	314974	+	transcript65.chr5.nnic@NA	transcript65.chr5.nnic	NA	309984	314974	Gene ID= novel_gene_chr5_66 TPM= 1.93 Transcript Type= NA
chr5	441498	443160	441498	443160	-	ENST00000623673.1@EXOC3-AS1	ENST00000623673.1	antisense_RNA	441498	443160	Gene ID= ENSG00000221990.4 TPM= 3.86 Transcript Type= antisense_RNA
chr5	443161	467285	443161	467285	+	transcript78.chr5.nnic@EXOC3	transcript78.chr5.nnic	protein_coding	443161,443261,446150,447533,453370,456889,457900,459359,461960,462157,464290,465111,465718,466727	443221,443290,446349,447752,454051,457006,458025,459459,462070,462307,464412,465272,465845,467285	Gene ID= ENSG00000180104.15 TPM= 52.85 Transcript Type= NA
chr5	443158	467296	443158	467296	+	ENST00000512944.5@EXOC3	ENST00000512944.5	protein_coding	443158,446150,447533,453370,456889,457900,459359,461960,462157,464290,465111,465718,466727	443290,446349,447752,454051,457006,458025,459459,462070,462307,464412,465272,465845,467296	Gene ID= ENSG00000180104.15 TPM= 70.23 Transcript Type= protein_coding
chr5	446149	467285	446149	467285	+	ENST00000315013.9@EXOC3	ENST00000315013.9	protein_coding	446149,447533,453370,456889,457900,459359,461960,462157,464290,465111,465718,466727	446349,447752,454051,457006,458025,459459,462070,462307,464412,465272,465845,467285	Gene ID= ENSG00000180104.15 TPM= 4.1 Transcript Type= protein_coding
chr5	470510	473098	470510	473098	-	ENST00000342584.3@PP7080	ENST00000342584.3	antisense_RNA	472679,470510	473098,471965	Gene ID= ENSG00000188242.4 TPM= 4.83 Transcript Type= antisense_RNA
chr5	469742	473101	469742	473101	-	transcript106.chr5.nnic@NA	transcript106.chr5.nnic	NA	469742	473101	Gene ID= novel_gene_chr5_107 TPM= 2.9 Transcript Type= NA
chr5	659862	693395	659862	693395	-	ENST00000360578.6@TPPP	ENST00000360578.6	protein_coding	693278,677750,665970,659862	693395,678064,666123,665296	Gene ID= ENSG00000171368.11 TPM= 16.41 Transcript Type= protein_coding
chr5	863741	892822	863741	892822	-	transcript117.chr5.nic@BRD9	transcript117.chr5.nic	protein_coding	892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,863741	892822,891854,891287,889766,889165,887471,886707,884070,881182,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 3.06 Transcript Type= NA
chr5	863741	892822	863741	892822	-	transcript118.chr5.nic@BRD9	transcript118.chr5.nic	protein_coding	892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,863741	892822,891854,891287,889647,889165,887471,886767,884070,881182,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 13.68 Transcript Type= NA
chr5	863741	892822	863741	892822	-	transcript120.chr5.nic@BRD9	transcript120.chr5.nic	protein_coding	892606,891640,891155,889587,889021,887361,886592,883938,879794,878355,876101,871526,870473,865414,863741	892822,891854,891287,889647,889165,887471,886707,884070,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 2.41 Transcript Type= NA
chr5	864273	892824	864273	892824	-	ENST00000467963.5@BRD9	ENST00000467963.5	protein_coding	892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,864273	892824,891854,891287,889647,889165,887471,886707,884070,881182,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 3.86 Transcript Type= protein_coding
chr5	863741	892800	863741	892800	-	ENST00000495265.5@BRD9	ENST00000495265.5	protein_coding	892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,863741	892800,891854,891287,889766,889165,887471,886767,884070,881182,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 3.06 Transcript Type= nonsense_mediated_decay
chr5	1050376	1112035	1050376	1112035	-	ENST00000264930.9@SLC12A7	ENST00000264930.9	protein_coding	1111868,1094154,1093533,1088982,1088306,1086903,1085232,1083745,1081577,1079398,1078701,1077833,1076694,1076138,1075371,1074567,1073633,1065283,1064083,1063844,1060344,1057471,1053349,1050376	1112035,1094248,1093655,1089128,1088360,1087033,1085473,1083956,1081744,1079496,1078758,1078007,1076812,1076236,1075490,1074671,1073801,1065478,1064252,1063975,1060451,1057649,1053482,1052451	Gene ID= ENSG00000113504.20 TPM= 11.58 Transcript Type= protein_coding
chr5	1317744	1345099	1317744	1345099	-	ENST00000320895.9@CLPTM1L	ENST00000320895.9	protein_coding	1344680,1344351,1341671,1338860,1337904,1335057,1334289,1331799,1330280,1325751,1324763,1323787,1322877,1321764,1321635,1320616,1317744	1345099,1344451,1341860,1339005,1337982,1335174,1334383,1331883,1330383,1325816,1324813,1323869,1322911,1321819,1321679,1320731,1318453	Gene ID= ENSG00000049656.13 TPM= 74.33 Transcript Type= protein_coding
chr5	1347109	1350788	1347109	1350788	+	transcript137.chr5.nnic@NA	transcript137.chr5.nnic	NA	1347109	1350788	Gene ID= novel_gene_chr5_138 TPM= 93.64 Transcript Type= NA
chr5	1461423	1523977	1461423	1523977	-	ENST00000283415.3@LPCAT1	ENST00000283415.3	protein_coding	1523710,1501461,1494700,1489746,1488391,1483428,1480942,1479621,1477404,1474560,1473957,1470826,1466749,1461423	1523977,1501603,1494914,1489858,1488451,1483486,1480976,1479675,1477486,1474685,1474110,1470924,1466890,1463835	Gene ID= ENSG00000153395.9 TPM= 9.65 Transcript Type= protein_coding
chr5	1798386	1801311	1798386	1801311	-	transcript146.chr5.nnic@MRPL36	transcript146.chr5.nnic	protein_coding	1801238,1799792,1798386	1801311,1800021,1798947	Gene ID= ENSG00000171421.12 TPM= 17.38 Transcript Type= NA
chr5	1798387	1799895	1798387	1799895	-	ENST00000508987.1@MRPL36	ENST00000508987.1	protein_coding	1799771,1798387	1799895,1798947	Gene ID= ENSG00000171421.12 TPM= 18.34 Transcript Type= protein_coding
chr5	1798390	1799840	1798390	1799840	-	transcript149.chr5.nnic@MRPL36	transcript149.chr5.nnic	protein_coding	1799781,1798390	1799840,1798947	Gene ID= ENSG00000171421.12 TPM= 23.17 Transcript Type= NA
chr5	1798390	1799838	1798390	1799838	-	ENST00000382647.7@MRPL36	ENST00000382647.7	protein_coding	1799810,1798390	1799838,1798947	Gene ID= ENSG00000171421.12 TPM= 14.48 Transcript Type= protein_coding
chr5	1798386	1799839	1798386	1799839	-	ENST00000505059.6@MRPL36	ENST00000505059.6	protein_coding	1799792,1798386	1799839,1798947	Gene ID= ENSG00000171421.12 TPM= 46.33 Transcript Type= protein_coding
chr5	1801385	1816048	1801385	1816048	+	transcript151.chr5.nnic@NDUFS6	transcript151.chr5.nnic	protein_coding	1801385,1802321,1810998,1814339,1815851	1801549,1802374,1811062,1814461,1816048	Gene ID= ENSG00000145494.11 TPM= 39.58 Transcript Type= NA
chr5	1883124	1884649	1883124	1884649	+	transcript156.chr5.nnic@AC025183.1	transcript156.chr5.nnic	antisense_RNA	1883124,1884480	1883546,1884649	Gene ID= ENSG00000249116.1 TPM= 16.41 Transcript Type= NA
chr5	5422650	5462971	5422650	5462971	+	transcript162.chr5.nic@ICE1	transcript162.chr5.nic	protein_coding	5422650,5436418,5437080,5439895,5441112,5443168,5444289,5447427,5447721,5447841,5454552,5457332,5460436	5422999,5436476,5437114,5439913,5441223,5443244,5444326,5447509,5447760,5447897,5454638,5457741,5462971	Gene ID= ENSG00000164151.11 TPM= 3.86 Transcript Type= NA
chr5	5422694	5490234	5422694	5490234	+	ENST00000296564.8@ICE1	ENST00000296564.8	protein_coding	5422694,5436418,5437080,5439895,5441112,5443168,5444289,5447427,5447721,5447841,5454552,5457332,5460436,5466334,5468828,5473558,5475973,5486721,5489149	5422999,5436476,5437114,5439913,5441223,5443244,5444326,5447509,5447760,5447897,5454638,5457741,5465226,5466502,5468988,5473748,5476079,5486819,5490234	Gene ID= ENSG00000164151.11 TPM= 19.31 Transcript Type= protein_coding
chr5	6371881	6378594	6371881	6378594	-	ENST00000255764.3@MED10	ENST00000255764.3	protein_coding	6378362,6377166,6374324,6371881	6378594,6377249,6374426,6372601	Gene ID= ENSG00000133398.3 TPM= 89.77 Transcript Type= protein_coding
chr5	6448623	6492590	6448623	6492590	+	transcript177.chr5.nnic@UBE2QL1	transcript177.chr5.nnic	protein_coding	6448623,6457677,6491218	6449247,6457930,6492590	Gene ID= ENSG00000215218.3 TPM= 27.68 Transcript Type= NA
chr5	6448623	6492591	6448623	6492591	+	transcript178.chr5.nnic@UBE2QL1	transcript178.chr5.nnic	protein_coding	6448623,6491218,6491715	6449247,6491676,6492591	Gene ID= ENSG00000215218.3 TPM= 23.81 Transcript Type= NA
chr5	6448623	6494909	6448623	6494909	+	ENST00000399816.3@UBE2QL1	ENST00000399816.3	protein_coding	6448623,6491218	6449247,6494909	Gene ID= ENSG00000215218.3 TPM= 650.62 Transcript Type= protein_coding
chr5	6599239	6633071	6599239	6633071	-	transcript188.chr5.nnic@NSUN2	transcript188.chr5.nnic	protein_coding	6632884,6632599,6631873,6625564,6623214,6622016,6620106,6617950,6616727,6611725,6610955,6609826,6607200,6606820,6605273,6604605,6604138,6602461,6599239	6633071,6632756,6631977,6625669,6623285,6622100,6620298,6618024,6616857,6611798,6611085,6609922,6607384,6606912,6605375,6604685,6604276,6602500,6600232	Gene ID= ENSG00000037474.14 TPM= 3.86 Transcript Type= NA
chr5	6599239	6633317	6599239	6633317	-	transcript194.chr5.nnic@NSUN2	transcript194.chr5.nnic	protein_coding	6632884,6632599,6631873,6623214,6622016,6620106,6617950,6616727,6611725,6610955,6609826,6607200,6606820,6605273,6604605,6604138,6602461,6599239	6633317,6632756,6631977,6623285,6622100,6620298,6618024,6616857,6611798,6611085,6609922,6607384,6606912,6605408,6604685,6604276,6602500,6600232	Gene ID= ENSG00000037474.14 TPM= 4.83 Transcript Type= NA
chr5	6599239	6633291	6599239	6633291	-	ENST00000264670.10@NSUN2	ENST00000264670.10	protein_coding	6632884,6632599,6631873,6625564,6623214,6622016,6620106,6617950,6616727,6611725,6610955,6609826,6607200,6606820,6605273,6604605,6604138,6602461,6599239	6633291,6632756,6631977,6625669,6623285,6622100,6620298,6618024,6616857,6611798,6611085,6609922,6607384,6606912,6605408,6604685,6604276,6602500,6600232	Gene ID= ENSG00000037474.14 TPM= 100.39 Transcript Type= protein_coding
chr5	6633343	6674386	6633343	6674386	+	ENST00000274192.6@SRD5A1	ENST00000274192.6	protein_coding	6633343,6651842,6656078,6662816,6668202	6633869,6652008,6656179,6662966,6674386	Gene ID= ENSG00000145545.11 TPM= 1.93 Transcript Type= protein_coding
chr5	6713007	6757048	6713007	6757048	+	ENST00000230859.7@PAPD7	ENST00000230859.7	protein_coding	6713007,6737510,6738683,6739732,6742490,6743712,6746214,6748464,6749557,6750331,6751039,6752873,6754751	6714699,6737633,6738729,6739852,6742597,6743840,6746427,6748590,6749657,6750503,6751197,6753037,6757048	Gene ID= ENSG00000112941.13 TPM= 18.34 Transcript Type= protein_coding
chr5	7396052	7827532	7396052	7827532	+	transcript214.chr5.nic@ADCY2	transcript214.chr5.nic	protein_coding	7396052,7414573,7520738,7626167,7690691,7695752,7698247,7706744,7707706,7709211,7712856,7717157,7724545,7727164,7743668,7757449,7766687,7772932,7784365,7789659,7802218,7804585,7816866,7820565,7826719	7396506,7414770,7520899,7626316,7690839,7695863,7698374,7706902,7707838,7709387,7712899,7717237,7724614,7727261,7743752,7757586,7766806,7773101,7784449,7789800,7802364,7804692,7816980,7820689,7827532	Gene ID= ENSG00000078295.16 TPM= 18.34 Transcript Type= NA
chr5	7859159	7869049	7859159	7869049	-	transcript227.chr5.nic@FASTKD3	transcript227.chr5.nic	protein_coding	7868979,7866646,7865898,7862823,7861583,7861149,7859159	7869049,7868107,7865983,7862997,7861652,7861263,7859539	Gene ID= ENSG00000124279.11 TPM= 1.93 Transcript Type= NA
chr5	7859159	7869002	7859159	7869002	-	ENST00000264669.9@FASTKD3	ENST00000264669.9	protein_coding	7868979,7866646,7865898,7862823,7861583,7861149,7859159	7869002,7868196,7865983,7862997,7861652,7861263,7859539	Gene ID= ENSG00000124279.11 TPM= 2.9 Transcript Type= protein_coding
chr5	7869104	7901124	7869104	7901124	+	ENST00000264668.6@MTRR	ENST00000264668.6	protein_coding	7869104,7870770,7873373,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914	7869189,7870923,7873526,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124	Gene ID= ENSG00000124275.14 TPM= 5.15 Transcript Type= protein_coding
chr5	7869148	7901124	7869148	7901124	+	ENST00000511461.5@MTRR	ENST00000511461.5	protein_coding	7869148,7870770,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914	7869189,7870923,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124	Gene ID= ENSG00000124275.14 TPM= 4.18 Transcript Type= nonsense_mediated_decay
chr5	7869189	7901124	7869189	7901124	+	ENST00000440940.6@MTRR	ENST00000440940.6	protein_coding	7869189,7870770,7873373,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914	7869215,7870923,7873526,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124	Gene ID= ENSG00000124275.14 TPM= 16.73 Transcript Type= protein_coding
chr5	8457493	8460663	8457493	8460663	+	ENST00000502001.2@MIR4458HG	ENST00000502001.2	lincRNA	8457493,8459933	8457766,8460663	Gene ID= ENSG00000247516.6 TPM= 40.54 Transcript Type= lincRNA
chr5	8457691	8463095	8457691	8463095	+	ENST00000606459.1@MIR4458HG	ENST00000606459.1	lincRNA	8457691,8459933	8457766,8463095	Gene ID= ENSG00000247516.6 TPM= 7.72 Transcript Type= lincRNA
chr5	10249921	10266412	10249921	10266412	+	ENST00000280326.8@CCT5	ENST00000280326.8	protein_coding	10249921,10254145,10254674,10255955,10258111,10258386,10260792,10261560,10262481,10263134,10264656	10250445,10254205,10254838,10256153,10258303,10258535,10260911,10261745,10262618,10263314,10266412	Gene ID= ENSG00000150753.11 TPM= 129.35 Transcript Type= protein_coding
chr5	10279277	10308026	10279277	10308026	-	ENST00000296658.3@CMBL	ENST00000296658.3	protein_coding	10307625,10290548,10288422,10286354,10282197,10279277	10308026,10290781,10288529,10286496,10282288,10280632	Gene ID= ENSG00000164237.8 TPM= 39.58 Transcript Type= protein_coding
chr5	10353674	10421066	10353674	10421066	+	transcript284.chr5.nnic@MARCH6	transcript284.chr5.nnic	protein_coding	10353674,10377798,10378759,10381800,10386994,10390332,10391542,10394082,10394753,10397293,10400784,10402059,10402384,10402533,10403407,10405558,10407102,10410139,10411333,10414433,10415488,10417270,10418676	10353917,10377894,10378832,10381943,10387066,10390500,10391731,10394143,10394785,10397344,10400842,10402139,10402452,10402607,10403541,10405677,10407202,10410276,10411537,10414502,10415669,10417404,10421066	Gene ID= ENSG00000145495.15 TPM= 3.86 Transcript Type= NA
chr5	10353703	10433961	10353703	10433961	+	ENST00000449913.6@MARCH6	ENST00000449913.6	protein_coding	10353703,10377798,10378759,10386994,10390332,10391542,10394082,10394753,10397293,10400784,10402059,10402384,10402533,10403407,10405558,10407102,10410139,10411333,10414433,10415488,10417270,10423735,10426390,10429893,10433594	10353917,10377894,10378832,10387066,10390500,10391731,10394143,10394785,10397344,10400842,10402139,10402452,10402607,10403541,10405677,10407202,10410276,10411537,10414502,10415669,10417404,10423824,10426522,10430028,10433961	Gene ID= ENSG00000145495.15 TPM= 4.83 Transcript Type= protein_coding
chr5	10435699	10439319	10435699	10439319	-	transcript287.chr5.nnic@NA	transcript287.chr5.nnic	NA	10435699	10439319	Gene ID= novel_gene_chr5_288 TPM= 86.88 Transcript Type= NA
chr5	10679230	10761272	10679230	10761272	-	ENST00000230895.10@DAP	ENST00000230895.10	protein_coding	10761014,10748175,10683529,10679230	10761272,10748271,10683571,10681169	Gene ID= ENSG00000112977.15 TPM= 12.55 Transcript Type= protein_coding
chr5	14709817	14871843	14709817	14871843	-	transcript307.chr5.nnic@ANKH	transcript307.chr5.nnic	protein_coding	14871352,14848776,14768975,14758480,14755861,14751069,14749172,14745870,14741827,14716706,14713544,14712874,14709817	14871843,14848863,14769191,14758598,14755944,14751239,14749306,14745962,14741922,14716835,14713667,14712973,14711310	Gene ID= ENSG00000154122.12 TPM= 24.13 Transcript Type= NA
chr5	14709817	14871835	14709817	14871835	-	transcript309.chr5.nnic@ANKH	transcript309.chr5.nnic	protein_coding	14871759,14871352,14768975,14758480,14755861,14751069,14749172,14745870,14741827,14716706,14713544,14712874,14709817	14871835,14871721,14769191,14758598,14755944,14751239,14749306,14745962,14741922,14716835,14713667,14712973,14711310	Gene ID= ENSG00000154122.12 TPM= 26.06 Transcript Type= NA
chr5	14847160	14871843	14847160	14871843	-	transcript323.chr5.nnic@ANKH	transcript323.chr5.nnic	protein_coding	14871352,14847160	14871843,14848863	Gene ID= ENSG00000154122.12 TPM= 3.38 Transcript Type= NA
chr5	14712094	14716512	14712094	14716512	+	transcript324.chr5.nnic@NA	transcript324.chr5.nnic	NA	14712094	14716512	Gene ID= novel_gene_chr5_325 TPM= 6.76 Transcript Type= NA
chr5	14868399	14871413	14868399	14871413	-	transcript326.chr5.nnic@NA	transcript326.chr5.nnic	NA	14868399	14871413	Gene ID= novel_gene_chr5_327 TPM= 1.93 Transcript Type= NA
chr5	16451519	16465792	16451519	16465792	-	ENST00000308683.2@ZNF622	ENST00000308683.2	protein_coding	16465041,16463482,16463108,16458517,16453013,16451519	16465792,16463742,16463270,16458629,16453156,16451784	Gene ID= ENSG00000173545.4 TPM= 165.07 Transcript Type= protein_coding
chr5	16474670	16508998	16474670	16508998	-	transcript333.chr5.nnic@RETREG1	transcript333.chr5.nnic	protein_coding	16508578,16505404,16483346,16481009,16478850,16478034,16477662,16474670	16508998,16505523,16483472,16481093,16478987,16478098,16477788,16475234	Gene ID= ENSG00000154153.13 TPM= 5.31 Transcript Type= NA
chr5	16473053	16508998	16473053	16508998	-	ENST00000399793.6@RETREG1	ENST00000399793.6	protein_coding	16508578,16483346,16481009,16478850,16478034,16477662,16473053	16508998,16483472,16481093,16478987,16478098,16477788,16475234	Gene ID= ENSG00000154153.13 TPM= 7.4 Transcript Type= protein_coding
chr5	16702977	16936334	16702977	16936334	-	transcript349.chr5.nic@MYO10	transcript349.chr5.nic	protein_coding	16935788,16877609,16818009,16794646,16783335,16781705,16780728,16780524,16779545,16769074,16766080,16764250,16763655,16763481,16762545,16762045,16761464,16758118,16754828,16711121,16710908,16704579,16702977	16936334,16877707,16818167,16794833,16783469,16781829,16780741,16780608,16779648,16769203,16766198,16764396,16763755,16763547,16762637,16762113,16761546,16758226,16754908,16711245,16711022,16704685,16703158	Gene ID= ENSG00000145555.14 TPM= 22.2 Transcript Type= NA
chr5	16702977	16936264	16702977	16936264	-	transcript352.chr5.nnic@MYO10	transcript352.chr5.nnic	protein_coding	16935788,16877609,16818009,16794646,16783335,16781705,16780728,16780524,16779545,16769074,16766080,16764250,16763655,16763481,16762545,16762045,16761464,16758118,16711121,16710908,16704579,16702977	16936264,16877707,16818167,16794833,16783469,16781829,16780741,16780608,16779648,16769203,16766198,16764396,16763755,16763547,16762637,16762113,16761546,16758226,16711245,16711022,16704685,16703158	Gene ID= ENSG00000145555.14 TPM= 2.9 Transcript Type= NA
chr5	16665286	16936263	16665286	16936263	-	ENST00000513610.5@MYO10	ENST00000513610.5	protein_coding	16935788,16877609,16818009,16794646,16783335,16781705,16780728,16780524,16779545,16769074,16766080,16764250,16763655,16763481,16762545,16762045,16761464,16758118,16754828,16711121,16710908,16704579,16702925,16702543,16700963,16699450,16694371,16689824,16685738,16683880,16681871,16681309,16679947,16676031,16674853,16673682,16672689,16671422,16670526,16668277,16665286	16936263,16877707,16818167,16794833,16783469,16781829,16780741,16780608,16779648,16769203,16766198,16764396,16763755,16763547,16762637,16762113,16761546,16758226,16754908,16711245,16711022,16704685,16703158,16702588,16701838,16699573,16694614,16689919,16685831,16683935,16682013,16681503,16680104,16676154,16675150,16673889,16672825,16671542,16670978,16668468,16666793	Gene ID= ENSG00000145555.14 TPM= 7.72 Transcript Type= protein_coding
chr5	21459500	21525578	21459500	21525578	+	transcript372.chr5.nnic@GUSBP1	transcript372.chr5.nnic	transcribed_unprocessed_pseudogene	21459500,21459678,21461783,21501692,21522338	21459584,21459743,21461866,21501826,21525578	Gene ID= ENSG00000183666.16 TPM= 1.93 Transcript Type= NA
chr5	21459556	21589372	21459556	21589372	+	ENST00000607545.5@GUSBP1	ENST00000607545.5	transcribed_unprocessed_pseudogene	21459556,21459678,21461783,21501692,21585530	21459584,21459743,21461866,21501826,21589372	Gene ID= ENSG00000183666.16 TPM= 2.9 Transcript Type= processed_transcript
chr5	21459513	21474439	21459513	21474439	+	ENST00000508973.5@GUSBP1	ENST00000508973.5	transcribed_unprocessed_pseudogene	21459513,21459678,21461783,21473357	21459584,21459743,21461866,21474439	Gene ID= ENSG00000183666.16 TPM= 3.86 Transcript Type= processed_transcript
chr5	31401134	31532109	31401134	31532109	-	ENST00000513349.5@DROSHA	ENST00000513349.5	protein_coding	31531990,31531450,31530798,31529040,31526079,31521123,31514988,31511035,31508621,31504555,31495286,31493207,31486491,31484881,31483554,31472063,31467939,31466182,31464236,31451533,31449281,31448547,31437239,31435765,31431576,31429475,31424427,31422787,31421272,31410746,31409250,31409056,31406853,31405677,31401134	31532109,31531525,31530924,31529105,31526912,31521215,31515219,31511176,31508775,31504635,31495372,31493293,31486562,31484962,31483628,31472232,31468063,31466281,31464343,31451640,31449419,31448607,31437298,31435864,31431678,31429545,31424471,31422944,31421377,31410887,31409332,31409159,31406945,31405723,31401562	Gene ID= ENSG00000113360.16 TPM= 2.9 Transcript Type= protein_coding
chr5	31532283	31554839	31532283	31554839	+	transcript385.chr5.nic@C5orf22	transcript385.chr5.nic	protein_coding	31532283,31534272,31535744,31538481,31540949,31541281,31545646,31551293,31552773	31532473,31534325,31535893,31538689,31541011,31541402,31545712,31551432,31554839	Gene ID= ENSG00000082213.17 TPM= 3.86 Transcript Type= NA
chr5	31532266	31555058	31532266	31555058	+	ENST00000325366.13@C5orf22	ENST00000325366.13	protein_coding	31532266,31534272,31535744,31538260,31540949,31541281,31545646,31551293,31552773	31532473,31534417,31535893,31538689,31541011,31541402,31545712,31551432,31555058	Gene ID= ENSG00000082213.17 TPM= 4.83 Transcript Type= protein_coding
chr5	31639410	32110931	31639410	32110931	+	ENST00000438447.1@PDZD2	ENST00000438447.1	protein_coding	31639410,31798889,31983155,31995576,32000139,32010330,32037231,32048539,32052611,32053769,32057655,32057878,32059239,32061002,32069569,32071384,32072161,32073832,32077462,32087131,32092907,32097279,32098364,32101105,32107969	31639437,31799724,31983656,31995718,32000271,32010482,32037342,32048684,32052730,32053883,32057728,32058103,32059356,32061134,32069650,32071418,32072317,32074643,32077606,32091175,32093024,32097380,32098634,32101239,32110931	Gene ID= ENSG00000133401.15 TPM= 5.79 Transcript Type= protein_coding
chr5	31638970	31646557	31638970	31646557	+	transcript396.chr5.nnic@PDZD2	transcript396.chr5.nnic	protein_coding	31638970,31646141,31646438	31639437,31646255,31646557	Gene ID= ENSG00000133401.15 TPM= 10.62 Transcript Type= NA
chr5	32124704	32174350	32124704	32174350	-	ENST00000265070.6@GOLPH3	ENST00000265070.6	protein_coding	32173810,32143749,32135572,32124704	32174350,32143880,32135686,32126636	Gene ID= ENSG00000113384.13 TPM= 167.96 Transcript Type= protein_coding
chr5	32174471	32175272	32174471	32175272	+	ENST00000606994.1@AC025181.2	ENST00000606994.1	lincRNA	32174471	32175272	Gene ID= ENSG00000272086.1 TPM= 3.86 Transcript Type= lincRNA
chr5	32227006	32313009	32227006	32313009	-	ENST00000382142.7@MTMR12	ENST00000382142.7	protein_coding	32312758,32276682,32273980,32271833,32270817,32268701,32263113,32255693,32248772,32248002,32243521,32242057,32239001,32234962,32233773,32227006	32313009,32276742,32274122,32271905,32270947,32268794,32263242,32255768,32248878,32248126,32243599,32242127,32239173,32235129,32233934,32230347	Gene ID= ENSG00000150712.10 TPM= 16.41 Transcript Type= protein_coding
chr5	32354350	32444761	32354350	32444761	-	ENST00000265069.12@ZFR	ENST00000265069.12	protein_coding	32444622,32444229,32419821,32417648,32414969,32406774,32403906,32403106,32400007,32397219,32395159,32390275,32388469,32387549,32385508,32380075,32379115,32364164,32363948,32354350	32444761,32444328,32420103,32417792,32415187,32407021,32404097,32403397,32400203,32397338,32395304,32390437,32388674,32387699,32385649,32380172,32379210,32364275,32364045,32355939	Gene ID= ENSG00000056097.15 TPM= 104.88 Transcript Type= protein_coding
chr5	32406727	32444738	32406727	32444738	-	ENST00000505366.1@ZFR	ENST00000505366.1	protein_coding	32444622,32444229,32419821,32417648,32414969,32406727	32444738,32444328,32420103,32417792,32415187,32407021	Gene ID= ENSG00000056097.15 TPM= 1.35 Transcript Type= retained_intron
chr5	32585499	32604079	32585499	32604079	+	ENST00000265073.8@SUB1	ENST00000265073.8	protein_coding	32585499,32588512,32591563,32598961,32601005	32585625,32588584,32591685,32599069,32604079	Gene ID= ENSG00000113387.11 TPM= 71.43 Transcript Type= protein_coding
chr5	33162179	33162807	33162179	33162807	+	ENST00000467270.1@AC010343.1	ENST00000467270.1	processed_pseudogene	33162179	33162807	Gene ID= ENSG00000240376.1 TPM= 4.83 Transcript Type= processed_pseudogene
chr5	33440964	33468085	33440964	33468085	+	ENST00000508361.5@TARS	ENST00000508361.5	protein_coding	33440964,33445324,33453289,33454945,33455587,33456002,33456149,33457257,33458566,33459695,33460902,33461158,33461667,33461906,33462099,33463753,33466871,33467560	33441143,33445404,33453412,33455066,33455704,33456066,33456227,33457403,33458664,33459861,33461064,33461295,33461744,33462006,33462203,33463825,33466985,33468085	Gene ID= ENSG00000113407.13 TPM= 8.69 Transcript Type= nonsense_mediated_decay
chr5	34908341	34929853	34908341	34929853	-	transcript500.chr5.nnic@RAD1	transcript500.chr5.nnic	protein_coding	34929649,34918232,34918052,34915416,34914695,34913470,34911554,34909258,34908341	34929853,34918297,34918136,34915626,34914961,34913578,34911812,34909356,34908948	Gene ID= ENSG00000113456.18 TPM= 2.9 Transcript Type= NA
chr5	34908554	34929853	34908554	34929853	-	transcript503.chr5.nnic@RAD1	transcript503.chr5.nnic	protein_coding	34929649,34918232,34918052,34915416,34914695,34911554,34909258,34908554	34929853,34918297,34918136,34915626,34914961,34911812,34909356,34908948	Gene ID= ENSG00000113456.18 TPM= 1.93 Transcript Type= NA
chr5	34905264	34916766	34905264	34916766	-	ENST00000382038.6@RAD1	ENST00000382038.6	protein_coding	34915416,34914695,34913470,34911554,34909258,34905264	34916766,34914961,34913578,34911812,34909356,34908948	Gene ID= ENSG00000113456.18 TPM= 3.86 Transcript Type= protein_coding
chr5	34908554	34929850	34908554	34929850	-	transcript508.chr5.nnic@RAD1	transcript508.chr5.nnic	protein_coding	34929649,34914695,34913470,34911554,34909258,34908554	34929850,34914961,34913578,34911812,34909356,34908948	Gene ID= ENSG00000113456.18 TPM= 3.86 Transcript Type= NA
chr5	34908554	34915548	34908554	34915548	-	ENST00000325577.8@RAD1	ENST00000325577.8	protein_coding	34915416,34914695,34911554,34909258,34908554	34915548,34914961,34911812,34909356,34908948	Gene ID= ENSG00000113456.18 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr5	34915376	34925996	34915376	34925996	+	ENST00000336767.5@BRIX1	ENST00000336767.5	protein_coding	34915376,34918364,34919840,34922217,34922539,34922695,34923001,34923133,34924847,34925226	34915897,34918475,34919883,34922287,34922588,34922768,34923051,34923234,34924975,34925996	Gene ID= ENSG00000113460.12 TPM= 3.86 Transcript Type= protein_coding
chr5	34929590	34952182	34929590	34952182	+	transcript490.chr5.nic@DNAJC21	transcript490.chr5.nic	protein_coding	34929590,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945761,34950170,34950444	34929916,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34952182	Gene ID= ENSG00000168724.14 TPM= 3.86 Transcript Type= NA
chr5	34929540	34953941	34929540	34953941	+	transcript492.chr5.nic@DNAJC21	transcript492.chr5.nic	protein_coding	34929540,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945761,34950170,34953926	34929916,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34953941	Gene ID= ENSG00000168724.14 TPM= 6.76 Transcript Type= NA
chr5	34929593	34955200	34929593	34955200	+	ENST00000342382.8@DNAJC21	ENST00000342382.8	protein_coding	34929593,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945761,34950170,34953926,34954553	34929916,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34954001,34955200	Gene ID= ENSG00000168724.14 TPM= 27.99 Transcript Type= protein_coding
chr5	36098412	36151961	36098412	36151961	-	ENST00000296603.4@LMBRD2	ENST00000296603.4	protein_coding	36151556,36143176,36142502,36141107,36137274,36136309,36124191,36122848,36122280,36117735,36116460,36115015,36114424,36111155,36109945,36108534,36105068,36098412	36151961,36143406,36142599,36141202,36137441,36136519,36124265,36122961,36122463,36117916,36116593,36115120,36114521,36111258,36109991,36108639,36105197,36104106	Gene ID= ENSG00000164187.6 TPM= 6.76 Transcript Type= protein_coding
chr5	36151989	36184041	36151989	36184041	+	ENST00000274254.9@SKP2	ENST00000274254.9	protein_coding	36151989,36152771,36163645,36166519,36168313,36170344,36171603,36176965,36177185,36183840	36152270,36153042,36163756,36166662,36168447,36170442,36171733,36177016,36177292,36184041	Gene ID= ENSG00000145604.15 TPM= 1.93 Transcript Type= protein_coding
chr5	36192885	36241925	36192885	36241925	-	transcript530.chr5.nic@NADK2	transcript530.chr5.nic	protein_coding	36241499,36227477,36226475,36225542,36219596,36217748,36211844,36208625,36207170,36201106,36200227,36197541,36192885	36241925,36227565,36226563,36225623,36219679,36217884,36211922,36208690,36207265,36201161,36200280,36197664,36195282	Gene ID= ENSG00000152620.12 TPM= 22.2 Transcript Type= NA
chr5	36606355	36688334	36606355	36688334	+	ENST00000265113.8@SLC1A3	ENST00000265113.8	protein_coding	36606355,36608329,36629450,36671029,36674049,36676892,36679627,36680395,36683864,36686065	36606735,36608604,36629587,36671233,36674091,36677184,36679860,36680589,36683998,36688334	Gene ID= ENSG00000079215.13 TPM= 2.9 Transcript Type= protein_coding
chr5	36871362	36876651	36871362	36876651	-	transcript541.chr5.nnic@NA	transcript541.chr5.nnic	NA	36871362	36876651	Gene ID= novel_gene_chr5_542 TPM= 9.65 Transcript Type= NA
chr5	36876770	36997002	36876770	36997002	+	transcript545.chr5.nic@NIPBL	transcript545.chr5.nic	protein_coding	36876770,36953618,36955472,36958104,36961484,36962123,36970876,36971945,36975776,36984676,36995622,36996472	36877178,36953760,36955637,36958231,36961583,36962274,36971036,36972041,36976402,36986301,36995804,36997002	Gene ID= ENSG00000164190.17 TPM= 7.24 Transcript Type= NA
chr5	36876759	37066413	36876759	37066413	+	ENST00000282516.12@NIPBL	ENST00000282516.12	protein_coding	36876759,36953618,36955472,36958104,36961484,36962123,36970876,36971945,36975776,36984676,36995622,37000373,37000817,37000989,37002662,37003261,37006357,37007323,37008008,37008623,37010087,37014683,37016038,37017019,37019311,37020459,37020775,37022051,37022244,37024585,37026229,37027359,37036379,37038602,37044347,37044636,37045443,37046109,37048502,37049111,37051779,37052366,37057186,37058891,37060844,37063790,37064527	36877178,36953760,36955637,36958231,36961583,36962274,36971036,36972041,36976402,36986301,36995804,37000570,37000888,37001078,37002765,37003347,37006588,37007474,37008088,37008723,37010225,37014765,37016170,37017162,37019400,37020673,37020877,37022149,37022390,37024719,37026327,37027412,37036487,37038738,37044487,37044729,37045597,37046199,37048675,37049301,37051886,37052566,37057332,37059165,37061018,37063978,37066413	Gene ID= ENSG00000164190.17 TPM= 14 Transcript Type= protein_coding
chr5	37249068	37250643	37249068	37250643	+	transcript556.chr5.nnic@NA	transcript556.chr5.nnic	NA	37249068,37250397	37249221,37250643	Gene ID= novel_gene_chr5_557 TPM= 2.9 Transcript Type= NA
chr5	37379212	37753435	37379212	37753435	+	ENST00000265107.8@WDR70	ENST00000265107.8	protein_coding	37379212,37379489,37381602,37392000,37396375,37437922,37443239,37479834,37516514,37605064,37697655,37701058,37702949,37721115,37722855,37724934,37726883,37752486	37379392,37379554,37381685,37392120,37396570,37437981,37443372,37479987,37516590,37605238,37697754,37701142,37703087,37721215,37722934,37725050,37727045,37753435	Gene ID= ENSG00000082068.8 TPM= 16.41 Transcript Type= protein_coding
chr5	37379295	37752672	37379295	37752672	+	transcript566.chr5.nnic@WDR70	transcript566.chr5.nnic	protein_coding	37379295,37379489,37381602,37392000,37396461,37437922,37443239,37479834,37516514,37605064,37697655,37701058,37702949,37721115,37722855,37724934,37726883,37752486	37379392,37379554,37381685,37392120,37396570,37437981,37443372,37479987,37516590,37605238,37697754,37701142,37703087,37721215,37722934,37725050,37727045,37752672	Gene ID= ENSG00000082068.8 TPM= 1.93 Transcript Type= NA
chr5	37379295	37752672	37379295	37752672	+	transcript569.chr5.nnic@WDR70	transcript569.chr5.nnic	protein_coding	37379295,37379489,37381602,37392000,37437922,37443239,37479834,37516514,37605064,37697655,37701058,37702949,37721115,37722855,37724934,37726883,37752486	37379392,37379554,37381685,37392120,37437981,37443372,37479987,37516590,37605238,37697754,37701142,37703087,37721215,37722934,37725050,37727045,37752672	Gene ID= ENSG00000082068.8 TPM= 1.93 Transcript Type= NA
chr5	37379295	37606736	37379295	37606736	+	transcript571.chr5.nic@WDR70	transcript571.chr5.nic	protein_coding	37379295,37379489,37381602,37392000,37396375,37437922,37443239,37479834,37516514,37605064	37379392,37379554,37381685,37392120,37396570,37437981,37443372,37479987,37516590,37606736	Gene ID= ENSG00000082068.8 TPM= 1.93 Transcript Type= NA
chr5	37837996	37838112	37837996	37838112	-	transcript574.chr5.nnic@NA	transcript574.chr5.nnic	NA	37837996	37838112	Gene ID= novel_gene_chr5_575 TPM= 4.83 Transcript Type= NA
chr5	38258409	38464549	38258409	38464549	+	ENST00000354891.7@EGFLAM	ENST00000354891.7	protein_coding	38258409,38337520,38338698,38350501,38352196,38370296,38406126,38406828,38407805,38409004,38412504,38418066,38424967,38427009,38431177,38435137,38438275,38445679,38448301,38451315,38458311,38462908,38463832	38258851,38337629,38338781,38350618,38352331,38370462,38406241,38407146,38407905,38409104,38412648,38418255,38425092,38427252,38431288,38435253,38438455,38445702,38448379,38451458,38458394,38463011,38464549	Gene ID= ENSG00000164318.17 TPM= 2.9 Transcript Type= protein_coding
chr5	38445540	38464556	38445540	38464556	+	ENST00000397210.7@EGFLAM	ENST00000397210.7	protein_coding	38445540,38448301,38451315,38458311,38462908,38463832	38445702,38448379,38451458,38458394,38463011,38464556	Gene ID= ENSG00000164318.17 TPM= 23.17 Transcript Type= protein_coding
chr5	38466166	38468485	38466166	38468485	-	transcript591.chr5.nnic@AC010457.1	transcript591.chr5.nnic	antisense_RNA	38468239,38466166	38468485,38466483	Gene ID= ENSG00000251257.2 TPM= 8.69 Transcript Type= NA
chr5	38460925	38468307	38460925	38468307	-	ENST00000510469.2@AC010457.1	ENST00000510469.2	antisense_RNA	38468239,38460925	38468307,38461313	Gene ID= ENSG00000251257.2 TPM= 2.9 Transcript Type= antisense_RNA
chr5	38466165	38467521	38466165	38467521	-	transcript592.chr5.nnic@NA	transcript592.chr5.nnic	NA	38466165	38467521	Gene ID= novel_gene_chr5_593 TPM= 2.9 Transcript Type= NA
chr5	38493213	38556656	38493213	38556656	-	transcript599.chr5.nic@LIFR	transcript599.chr5.nic	protein_coding	38556334,38530506,38528726,38527155,38523419,38511790,38510464,38506503,38505905,38503976,38502637,38499513,38496382,38493213	38556656,38530666,38528840,38527294,38523582,38511964,38510718,38506632,38506074,38504121,38502799,38499583,38496595,38493785	Gene ID= ENSG00000113594.9 TPM= 7.72 Transcript Type= NA
chr5	38476539	38479418	38476539	38479418	-	transcript604.chr5.nnic@NA	transcript604.chr5.nnic	NA	38476539	38479418	Gene ID= novel_gene_chr5_605 TPM= 2.9 Transcript Type= NA
chr5	38556776	38558168	38556776	38558168	+	transcript602.chr5.nnic@NA	transcript602.chr5.nnic	NA	38556776	38558168	Gene ID= novel_gene_chr5_603 TPM= 2.9 Transcript Type= NA
chr5	38846036	38886657	38846036	38886657	+	transcript608.chr5.nic@OSMR	transcript608.chr5.nic	protein_coding	38846036,38869032,38876201,38881593,38883827,38885349,38886039	38846387,38869117,38876373,38881764,38884111,38885484,38886657	Gene ID= ENSG00000145623.12 TPM= 3.86 Transcript Type= NA
chr5	38937919	39074408	38937919	39074408	-	ENST00000357387.7@RICTOR	ENST00000357387.7	protein_coding	39074329,39074111,39021039,39003558,39002535,38996819,38990949,38981867,38978583,38975537,38971877,38967943,38967337,38967161,38966641,38964792,38962876,38962485,38962315,38960398,38959779,38959195,38958667,38958443,38957652,38955595,38954774,38953461,38952985,38952196,38949712,38947264,38946468,38945491,38944913,38944446,38942833,38937919	39074408,39074158,39021136,39003622,39002666,38996882,38991075,38982036,38978650,38975604,38971959,38968030,38967427,38967227,38966721,38964892,38963041,38962586,38962361,38960533,38959978,38959321,38958831,38958519,38957730,38955704,38954861,38953553,38953091,38952425,38950720,38947441,38946552,38945724,38945068,38944569,38942971,38942378	Gene ID= ENSG00000164327.12 TPM= 5.79 Transcript Type= protein_coding
chr5	38980880	39074408	38980880	39074408	-	transcript615.chr5.nnic@RICTOR	transcript615.chr5.nnic	protein_coding	39074329,39074111,39030491,39021039,39003558,39002535,38996819,38990949,38980880	39074408,39074158,39030572,39021136,39003622,39002666,38996882,38991075,38982036	Gene ID= ENSG00000164327.12 TPM= 1.93 Transcript Type= NA
chr5	38980880	39074399	38980880	39074399	-	ENST00000513566.1@RICTOR	ENST00000513566.1	protein_coding	39074329,39074111,39021039,39003558,39002535,38996819,38990949,38980880	39074399,39074158,39021136,39003622,39002666,38996882,38991075,38982036	Gene ID= ENSG00000164327.12 TPM= 2.9 Transcript Type= retained_intron
chr5	39050338	39053763	39050338	39053763	-	transcript619.chr5.nnic@NA	transcript619.chr5.nnic	NA	39050338	39053763	Gene ID= novel_gene_chr5_620 TPM= 1.93 Transcript Type= NA
chr5	40679498	40693735	40679498	40693735	+	ENST00000302472.3@PTGER4	ENST00000302472.3	protein_coding	40679498,40680951,40691779	40680478,40681860,40693735	Gene ID= ENSG00000171522.5 TPM= 3.86 Transcript Type= protein_coding
chr5	40714475	40755975	40714475	40755975	-	ENST00000337702.4@TTC33	ENST00000337702.4	protein_coding	40755824,40746798,40730262,40728345,40714475	40755975,40747019,40730343,40728476,40716498	Gene ID= ENSG00000113638.13 TPM= 38.61 Transcript Type= protein_coding
chr5	40759379	40798198	40759379	40798198	-	ENST00000397128.6@PRKAA1	ENST00000397128.6	protein_coding	40798063,40777445,40775410,40771719,40769416,40767466,40764752,40764514,40759379	40798198,40777586,40775503,40771863,40769503,40767690,40765238,40764640,40763022	Gene ID= ENSG00000132356.11 TPM= 6.76 Transcript Type= protein_coding
chr5	40825262	40835335	40825262	40835335	-	ENST00000274242.9@RPL37	ENST00000274242.9	protein_coding	40835183,40834471,40834181,40825262	40835335,40834606,40834265,40832573	Gene ID= ENSG00000145592.13 TPM= 122.59 Transcript Type= protein_coding
chr5	40909252	40982939	40909252	40982939	+	ENST00000313164.9@C7	ENST00000313164.9	protein_coding	40909252,40928580,40931064,40934325,40936338,40937552,40945198,40947602,40949904,40955387,40958033,40959449,40962085,40964741,40972403,40976750,40979725,40981392	40909616,40928635,40931139,40934466,40936485,40937690,40945368,40947845,40950014,40955553,40958261,40959620,40962172,40964873,40972594,40976840,40979909,40982939	Gene ID= ENSG00000112936.18 TPM= 6.76 Transcript Type= protein_coding
chr5	41730065	41870519	41730065	41870519	-	ENST00000196371.9@OXCT1	ENST00000196371.9	protein_coding	41870281,41862642,41861314,41853419,41850030,41842675,41840451,41807331,41805567,41803069,41801022,41794677,41794003,41762111,41749527,41739390,41730065	41870519,41862750,41861404,41853554,41850179,41842781,41840511,41807438,41805681,41803163,41801070,41794749,41794078,41762200,41749607,41739491,41731770	Gene ID= ENSG00000083720.12 TPM= 28.96 Transcript Type= protein_coding
chr5	41925254	41941743	41925254	41941743	+	ENST00000281623.7@FBXO4	ENST00000281623.7	protein_coding	41925254,41927013,41929697,41933946,41934133,41939441,41941192	41925498,41927248,41929917,41934021,41934308,41939616,41941743	Gene ID= ENSG00000151876.12 TPM= 1.93 Transcript Type= protein_coding
chr5	42423777	42721877	42423777	42721877	+	ENST00000230882.8@GHR	ENST00000230882.8	protein_coding	42423777,42565864,42629038,42688890,42694917,42699824,42711207,42713429,42718052,42718453	42423955,42565944,42629103,42689019,42695089,42700002,42711372,42713519,42718121,42721877	Gene ID= ENSG00000112964.13 TPM= 3.86 Transcript Type= protein_coding
chr5	42423473	42721821	42423473	42721821	+	transcript666.chr5.nic@GHR	transcript666.chr5.nic	protein_coding	42423473,42565864,42688890,42694917,42699824,42711207,42713429,42718052,42718453	42423955,42565944,42689019,42695089,42700002,42711372,42713519,42718121,42721821	Gene ID= ENSG00000112964.13 TPM= 11.58 Transcript Type= NA
chr5	42800112	42811892	42800112	42811892	-	ENST00000511224.5@SELENOP	ENST00000511224.5	protein_coding	42811836,42809760,42808151,42806896,42804656,42800112	42811892,42809788,42808366,42807108,42804773,42801331	Gene ID= ENSG00000250722.5 TPM= 11.58 Transcript Type= protein_coding
chr5	42799880	42812079	42799880	42812079	-	ENST00000514985.5@SELENOP	ENST00000514985.5	protein_coding	42811836,42808151,42806896,42804656,42799880	42812079,42808366,42807108,42804773,42801331	Gene ID= ENSG00000250722.5 TPM= 92.67 Transcript Type= protein_coding
chr5	42799883	42811892	42799883	42811892	-	ENST00000512980.5@SELENOP	ENST00000512980.5	protein_coding	42811836,42808151,42804656,42799883	42811892,42808366,42807108,42801331	Gene ID= ENSG00000250722.5 TPM= 1.93 Transcript Type= retained_intron
chr5	43120852	43175734	43120852	43175734	+	transcript683.chr5.nic@ZNF131	transcript683.chr5.nic	protein_coding	43120852,43122039,43123209,43139165,43161249,43161709,43173318,43174447	43121123,43122177,43123310,43139309,43161606,43161931,43173448,43175734	Gene ID= ENSG00000172262.11 TPM= 3.86 Transcript Type= NA
chr5	43120908	43175734	43120908	43175734	+	transcript686.chr5.nic@ZNF131	transcript686.chr5.nic	protein_coding	43120908,43122039,43123209,43139165,43161249,43173318,43174447	43121123,43122177,43123310,43139309,43161931,43173448,43175734	Gene ID= ENSG00000172262.11 TPM= 5.79 Transcript Type= NA
chr5	43121595	43175734	43121595	43175734	+	transcript689.chr5.nic@ZNF131	transcript689.chr5.nic	protein_coding	43121595,43122039,43123209,43139165,43161249,43173318,43174447	43121828,43122177,43123310,43139309,43161931,43173448,43175734	Gene ID= ENSG00000172262.11 TPM= 1.93 Transcript Type= NA
chr5	43120918	43175734	43120918	43175734	+	ENST00000510026.5@ZNF131	ENST00000510026.5	protein_coding	43120918,43122039,43123209,43139165,43161249,43161709,43173318,43174447	43121123,43122177,43123310,43139309,43161613,43161931,43173448,43175734	Gene ID= ENSG00000172262.11 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr5	43121540	43175719	43121540	43175719	+	ENST00000306938.8@ZNF131	ENST00000306938.8	protein_coding	43121540,43122039,43123209,43139165,43161249,43161709,43173318,43174447	43121568,43122177,43123310,43139309,43161606,43161931,43173448,43175719	Gene ID= ENSG00000172262.11 TPM= 1.93 Transcript Type= protein_coding
chr5	43192215	43280850	43192215	43280850	+	transcript693.chr5.nic@NIM1K	transcript693.chr5.nic	protein_coding	43192215,43240260,43245082,43277057,43279980	43192411,43240390,43246067,43277325,43280850	Gene ID= ENSG00000177453.7 TPM= 1.93 Transcript Type= NA
chr5	43444670	43483885	43444670	43483885	-	ENST00000397080.7@TMEM267	ENST00000397080.7	protein_coding	43483822,43453658,43444670	43483885,43454043,43446557	Gene ID= ENSG00000151881.14 TPM= 2.9 Transcript Type= protein_coding
chr5	43526267	43557079	43526267	43557079	-	ENST00000306846.7@PAIP1	ENST00000306846.7	protein_coding	43556582,43555830,43547728,43543004,43538924,43536819,43535534,43534853,43533738,43529786,43526267	43557079,43555999,43547913,43543116,43539035,43536944,43535640,43534970,43533792,43529879,43527469	Gene ID= ENSG00000172239.13 TPM= 2.9 Transcript Type= protein_coding
chr5	43527092	43557093	43527092	43557093	-	ENST00000436644.6@PAIP1	ENST00000436644.6	protein_coding	43556819,43555830,43547728,43543004,43538924,43536819,43535534,43534853,43533738,43529786,43527092	43557093,43555999,43547913,43543116,43539035,43536944,43535640,43534970,43533792,43529879,43527469	Gene ID= ENSG00000172239.13 TPM= 136.43 Transcript Type= protein_coding
chr5	43575582	43578648	43575582	43578648	-	transcript770.chr5.nnic@NA	transcript770.chr5.nnic	NA	43575582	43578648	Gene ID= novel_gene_chr5_771 TPM= 6.76 Transcript Type= NA
chr5	43602723	43707405	43602723	43707405	+	ENST00000264663.9@NNT	ENST00000264663.9	protein_coding	43602723,43609143,43612908,43615848,43619032,43624032,43628200,43644192,43644611,43645357,43649147,43650477,43651739,43653018,43655840,43656653,43659171,43675511,43677725,43700119,43702621,43704255	43602890,43609346,43613137,43616065,43619119,43624120,43628387,43644325,43644802,43645510,43649308,43650587,43651884,43653213,43656073,43656813,43659350,43675670,43677806,43700237,43702736,43707405	Gene ID= ENSG00000112992.16 TPM= 8.28 Transcript Type= protein_coding
chr5	43603127	43705232	43603127	43705232	+	ENST00000344920.8@NNT	ENST00000344920.8	protein_coding	43603127,43609143,43612908,43615848,43619032,43624032,43628200,43644192,43644611,43645357,43649147,43650477,43651739,43653018,43655840,43656653,43659171,43675511,43677725,43700119,43702621,43704255	43603294,43609346,43613137,43616065,43619119,43624120,43628387,43644325,43644802,43645510,43649308,43650587,43651884,43653213,43656073,43656813,43659350,43675670,43677806,43700237,43702736,43705232	Gene ID= ENSG00000112992.16 TPM= 96.13 Transcript Type= protein_coding
chr5	44495148	44568679	44495148	44568679	-	transcript772.chr5.nnic@LINC02224	transcript772.chr5.nnic	lincRNA	44568566,44504293,44500541,44495148	44568679,44504472,44500651,44495793	Gene ID= ENSG00000249203.1 TPM= 1.93 Transcript Type= NA
chr5	44808925	44815522	44808925	44815522	+	ENST00000507110.5@MRPS30	ENST00000507110.5	protein_coding	44808925,44811009,44811915,44813106,44814913	44809563,44811154,44812020,44813282,44815522	Gene ID= ENSG00000112996.10 TPM= 43.44 Transcript Type= protein_coding
chr5	52787896	52959210	52787896	52959210	+	ENST00000282588.6@ITGA1	ENST00000282588.6	protein_coding	52787896,52849365,52861447,52864763,52864971,52865690,52881873,52887815,52893675,52897455,52898239,52905763,52908898,52910162,52915464,52918732,52920332,52922777,52925278,52927584,52929625,52932047,52933894,52937401,52939590,52939840,52944943,52947345,52952407	52788414,52849485,52861559,52864851,52865082,52865817,52882021,52887965,52893840,52897528,52898383,52905908,52909041,52910419,52915594,52918898,52920468,52922887,52925487,52927664,52929701,52932136,52933996,52937514,52939691,52939944,52945035,52947461,52959210	Gene ID= ENSG00000213949.8 TPM= 5.79 Transcript Type= protein_coding
chr5	52798966	52802048	52798966	52802048	+	transcript792.chr5.nic@PELO	transcript792.chr5.nic	protein_coding	52798966,52801409	52801120,52802048	Gene ID= ENSG00000152684.10 TPM= 59.37 Transcript Type= NA
chr5	52800090	52802617	52800090	52802617	+	transcript793.chr5.nic@PELO	transcript793.chr5.nic	protein_coding	52800090,52801409	52801120,52802617	Gene ID= ENSG00000152684.10 TPM= 9.17 Transcript Type= NA
chr5	53098062	53109741	53098062	53109741	-	transcript794.chr5.nnic@MOCS2	transcript794.chr5.nnic	protein_coding	53109072,53108522,53107077,53102097,53101359,53100411,53098062	53109741,53108643,53107221,53102224,53101509,53100534,53098667	Gene ID= ENSG00000164172.18 TPM= 2.17 Transcript Type= NA
chr5	53098062	53109777	53098062	53109777	-	transcript797.chr5.nnic@MOCS2	transcript797.chr5.nnic	protein_coding	53109712,53108522,53102097,53101359,53100411,53098062	53109777,53108643,53102224,53101509,53100534,53098667	Gene ID= ENSG00000164172.18 TPM= 4.1 Transcript Type= NA
chr5	53098068	53109778	53098068	53109778	-	ENST00000450852.7@MOCS2	ENST00000450852.7	protein_coding	53109712,53108522,53107077,53102097,53101359,53100411,53098068	53109778,53108643,53107221,53102224,53101509,53100534,53098667	Gene ID= ENSG00000164172.18 TPM= 60.09 Transcript Type= protein_coding
chr5	53098062	53109759	53098062	53109759	-	ENST00000396954.7@MOCS2	ENST00000396954.7	protein_coding	53109251,53108522,53107077,53102097,53101359,53100411,53098062	53109759,53108643,53107221,53102224,53101509,53100534,53098667	Gene ID= ENSG00000164172.18 TPM= 8.93 Transcript Type= protein_coding
chr5	53560635	53683340	53560635	53683340	+	ENST00000296684.9@NDUFS4	ENST00000296684.9	protein_coding	53560635,53603452,53646233,53658551,53683118	53560760,53603530,53646405,53658624,53683340	Gene ID= ENSG00000164258.11 TPM= 78.03 Transcript Type= protein_coding
chr5	53560647	53683338	53560647	53683338	+	ENST00000506974.5@NDUFS4	ENST00000506974.5	protein_coding	53560647,53603452,53604724,53646233,53658551,53683118	53560760,53603530,53604895,53646405,53658624,53683338	Gene ID= ENSG00000164258.11 TPM= 4.66 Transcript Type= nonsense_mediated_decay
chr5	53560675	53683338	53560675	53683338	+	ENST00000506765.1@NDUFS4	ENST00000506765.1	protein_coding	53560675,53603452,53646233,53683118	53560760,53603530,53646405,53683338	Gene ID= ENSG00000164258.11 TPM= 3.21 Transcript Type= protein_coding
chr5	54455601	54456384	54455601	54456384	+	ENST00000302005.2@HSPB3	ENST00000302005.2	protein_coding	54455601	54456384	Gene ID= ENSG00000169271.2 TPM= 83.98 Transcript Type= protein_coding
chr5	54455698	54459145	54455698	54459145	+	transcript809.chr5.nnic@NA	transcript809.chr5.nnic	NA	54455698	54459145	Gene ID= novel_gene_chr5_810 TPM= 6.76 Transcript Type= NA
chr5	54517734	54607080	54517734	54607080	+	transcript817.chr5.nnic@SNX18	transcript817.chr5.nnic	protein_coding	54517734,54606403	54519573,54607080	Gene ID= ENSG00000178996.13 TPM= 1.93 Transcript Type= NA
chr5	55102648	55110252	55102648	55110252	+	ENST00000274306.6@GZMA	ENST00000274306.6	protein_coding	55102648,55105474,55107794,55108125,55110021	55102752,55105618,55107935,55108394,55110252	Gene ID= ENSG00000145649.7 TPM= 1.93 Transcript Type= protein_coding
chr5	55160118	55164924	55160118	55164924	+	ENST00000503787.5@GPX8	ENST00000503787.5	protein_coding	55160118,55160994,55164055	55160396,55161255,55164924	Gene ID= ENSG00000164294.13 TPM= 1.93 Transcript Type= protein_coding
chr5	55256245	55307722	55256245	55307722	-	ENST00000251636.9@DHX29	ENST00000251636.9	protein_coding	55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283203,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55262630,55261368,55259848,55256245	55307722,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273377,55272175,55270706,55270487,55269637,55267822,55267231,55262932,55261499,55259944,55256540	Gene ID= ENSG00000067248.9 TPM= 22.8 Transcript Type= protein_coding
chr5	55256245	55307704	55256245	55307704	-	transcript825.chr5.nnic@DHX29	transcript825.chr5.nnic	protein_coding	55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283356,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55262630,55261368,55259848,55256245	55307704,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273377,55272175,55270706,55270487,55269637,55267822,55267231,55262932,55261499,55259944,55256540	Gene ID= ENSG00000067248.9 TPM= 2.61 Transcript Type= NA
chr5	55256245	55307704	55256245	55307704	-	transcript826.chr5.nic@DHX29	transcript826.chr5.nic	protein_coding	55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283203,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55262630,55261368,55259848,55256245	55307704,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273426,55272175,55270706,55270487,55269637,55267822,55267231,55262932,55261499,55259944,55256540	Gene ID= ENSG00000067248.9 TPM= 3.98 Transcript Type= NA
chr5	55256245	55307704	55256245	55307704	-	transcript827.chr5.nnic@DHX29	transcript827.chr5.nnic	protein_coding	55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283203,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55261368,55259848,55256245	55307704,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273377,55272175,55270706,55270487,55269637,55267822,55267231,55261499,55259944,55256540	Gene ID= ENSG00000067248.9 TPM= 5.91 Transcript Type= NA
chr5	55282485	55307704	55282485	55307704	-	transcript829.chr5.nic@DHX29	transcript829.chr5.nic	protein_coding	55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55282485	55307704,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811	Gene ID= ENSG00000067248.9 TPM= 3.33 Transcript Type= NA
chr5	55424854	55534963	55424854	55534963	-	transcript842.chr5.nic@PLPP1	transcript842.chr5.nic	protein_coding	55534572,55490960,55475299,55467869,55441851,55425863,55424854	55534963,55491114,55475450,55468149,55441908,55426039,55425334	Gene ID= ENSG00000067113.16 TPM= 5.79 Transcript Type= NA
chr5	55424885	55535050	55424885	55535050	-	ENST00000307259.8@PLPP1	ENST00000307259.8	protein_coding	55534572,55475299,55467869,55441851,55425863,55424885	55535050,55475450,55468149,55441908,55426039,55425334	Gene ID= ENSG00000067113.16 TPM= 55.02 Transcript Type= protein_coding
chr5	55424854	55534969	55424854	55534969	-	ENST00000264775.9@PLPP1	ENST00000264775.9	protein_coding	55534572,55490960,55467869,55441851,55425863,55424854	55534969,55491114,55468149,55441908,55426039,55425334	Gene ID= ENSG00000067113.16 TPM= 49.23 Transcript Type= protein_coding
chr5	55625845	55712726	55625845	55712726	-	ENST00000396865.6@SLC38A9	ENST00000396865.6	protein_coding	55712217,55711452,55697846,55672563,55669758,55669557,55669228,55664693,55656715,55652529,55649207,55645789,55635544,55633754,55627891,55625845	55712726,55711499,55697992,55672695,55669879,55669620,55669321,55664863,55656774,55652723,55649314,55645895,55635657,55633902,55627980,55626659	Gene ID= ENSG00000177058.11 TPM= 3.86 Transcript Type= protein_coding
chr5	55941694	55994962	55941694	55994962	-	transcript868.chr5.nic@IL6ST	transcript868.chr5.nic	protein_coding	55994784,55982724,55976215,55969550,55968276,55964146,55963352,55960402,55957209,55956025,55952250,55951929,55951464,55947493,55942670,55941694	55994962,55982811,55976293,55969855,55968396,55964312,55963506,55960561,55957291,55956235,55952351,55952075,55951604,55947589,55942751,55941819	Gene ID= ENSG00000134352.19 TPM= 4.83 Transcript Type= NA
chr5	55941694	55995018	55941694	55995018	-	transcript869.chr5.nnic@IL6ST	transcript869.chr5.nnic	protein_coding	55994784,55982724,55976215,55969550,55968276,55964146,55963352,55960402,55957209,55956025,55954810,55952250,55951464,55947493,55942670,55941694	55995018,55982811,55976293,55969855,55968396,55964312,55963506,55960561,55957291,55956235,55954992,55952351,55951604,55947589,55942751,55941819	Gene ID= ENSG00000134352.19 TPM= 5.79 Transcript Type= NA
chr5	56909260	56917235	56909260	56917235	+	ENST00000285947.4@SETD9	ENST00000285947.4	protein_coding	56909260,56911169,56913011,56913874,56914861,56916815	56909743,56911536,56913134,56913989,56914966,56917235	Gene ID= ENSG00000155542.11 TPM= 4.83 Transcript Type= protein_coding
chr5	56909594	56917179	56909594	56917179	+	transcript886.chr5.nnic@SETD9	transcript886.chr5.nnic	protein_coding	56909594,56911169,56913011,56913874,56914861,56916815	56909743,56912258,56913134,56913989,56914966,56917179	Gene ID= ENSG00000155542.11 TPM= 1.93 Transcript Type= NA
chr5	57173812	57263082	57173812	57263082	+	transcript897.chr5.nnic@GPBP1	transcript897.chr5.nnic	protein_coding	57173812,57175448,57214074,57230846,57231098,57235966,57237113,57246300,57247075,57249409,57250954,57261180,57262594	57173926,57176400,57214193,57230969,57231321,57236032,57237172,57246484,57247215,57249576,57251141,57261282,57263082	Gene ID= ENSG00000062194.15 TPM= 2.9 Transcript Type= NA
chr5	57173812	57263587	57173812	57263587	+	transcript912.chr5.nnic@GPBP1	transcript912.chr5.nnic	protein_coding	57173812,57175448,57214074,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594	57173926,57176400,57214193,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263587	Gene ID= ENSG00000062194.15 TPM= 5.79 Transcript Type= NA
chr5	57174117	57263082	57174117	57263082	+	ENST00000506184.6@GPBP1	ENST00000506184.6	protein_coding	57174117,57175448,57214074,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594	57174211,57176400,57214193,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263082	Gene ID= ENSG00000062194.15 TPM= 27.03 Transcript Type= protein_coding
chr5	59157066	59193917	59157066	59193917	-	transcript947.chr5.nnic@PDE4D	transcript947.chr5.nnic	protein_coding	59193646,59193500,59185189,59180595,59157066	59193917,59193536,59185262,59180644,59157362	Gene ID= ENSG00000113448.18 TPM= 1.93 Transcript Type= NA
chr5	58993372	59039962	58993372	59039962	-	transcript950.chr5.nic@PDE4D	transcript950.chr5.nic	protein_coding	59039058,59038859,58993372	59039962,59038971,58993465	Gene ID= ENSG00000113448.18 TPM= 1.93 Transcript Type= NA
chr5	59584057	59586519	59584057	59586519	+	transcript952.chr5.nnic@NA	transcript952.chr5.nnic	NA	59584057	59586519	Gene ID= novel_gene_chr5_953 TPM= 9.65 Transcript Type= NA
chr5	59587334	59587632	59587334	59587632	-	transcript954.chr5.nnic@NA	transcript954.chr5.nnic	NA	59587334	59587632	Gene ID= novel_gene_chr5_955 TPM= 13.51 Transcript Type= NA
chr5	60873834	60945070	60873834	60945070	-	transcript961.chr5.nnic@ERCC8	transcript961.chr5.nnic	protein_coding	60944932,60928864,60922054,60918265,60904792,60903648,60902442,60899627,60898276,60887440,60873834	60945070,60928959,60922155,60918388,60904873,60903716,60902508,60899727,60898400,60887520,60874683	Gene ID= ENSG00000049167.13 TPM= 1.93 Transcript Type= NA
chr5	60873832	60945051	60873832	60945051	-	ENST00000265038.9@ERCC8	ENST00000265038.9	protein_coding	60944932,60928864,60922054,60918265,60904792,60903648,60902442,60899627,60898276,60890889,60887440,60873832	60945051,60928959,60922155,60918388,60904873,60903716,60902508,60899727,60898400,60891086,60887520,60874683	Gene ID= ENSG00000049167.13 TPM= 3.86 Transcript Type= protein_coding
chr5	60945129	61153037	60945129	61153037	+	ENST00000296597.9@NDUFAF2	ENST00000296597.9	protein_coding	60945129,61073125,61098992,61152704	60945382,61073214,61099032,61153037	Gene ID= ENSG00000164182.10 TPM= 38.61 Transcript Type= protein_coding
chr5	60945148	61153026	60945148	61153026	+	transcript966.chr5.nnic@NDUFAF2	transcript966.chr5.nnic	protein_coding	60945148,61073125,61098992,61152704	60945428,61073214,61099032,61153026	Gene ID= ENSG00000164182.10 TPM= 5.79 Transcript Type= NA
chr5	61162613	61163312	61162613	61163312	+	transcript973.chr5.nnic@NA	transcript973.chr5.nnic	NA	61162613	61163312	Gene ID= novel_gene_chr5_974 TPM= 1.93 Transcript Type= NA
chr5	62387254	62403933	62387254	62403933	-	ENST00000199320.8@DIMT1	ENST00000199320.8	protein_coding	62403694,62403273,62402036,62398820,62398646,62398511,62394484,62393955,62392926,62392171,62390876,62387254	62403933,62403346,62402122,62398881,62398739,62398560,62394607,62394047,62392990,62392234,62390982,62389052	Gene ID= ENSG00000086189.9 TPM= 4.83 Transcript Type= protein_coding
chr5	62391717	62403898	62391717	62403898	-	ENST00000506390.5@DIMT1	ENST00000506390.5	protein_coding	62403694,62403273,62402036,62398820,62398646,62398511,62394484,62393955,62392926,62392171,62391717	62403898,62403346,62402122,62398881,62398739,62398560,62394607,62394047,62392990,62392234,62392006	Gene ID= ENSG00000086189.9 TPM= 1.93 Transcript Type= protein_coding
chr5	62412767	62628577	62412767	62628577	+	ENST00000325324.10@IPO11	ENST00000325324.10	protein_coding	62412767,62437274,62442983,62449927,62451730,62467131,62470250,62474416,62476683,62483101,62484010,62485419,62487771,62489302,62490115,62493998,62504667,62504858,62506241,62515388,62526142,62530709,62536702,62537209,62550367,62551223,62561136,62591577,62601764,62627154	62412929,62437417,62443083,62449999,62451933,62467263,62470308,62474464,62476753,62483293,62484162,62485462,62487861,62489349,62490220,62494124,62504700,62504898,62506357,62515501,62526257,62530785,62536781,62537289,62550462,62551336,62561257,62591672,62601848,62628577	Gene ID= ENSG00000086200.16 TPM= 12.55 Transcript Type= protein_coding
chr5	62412763	62628577	62412763	62628577	+	transcript991.chr5.nic@IPO11	transcript991.chr5.nic	protein_coding	62412763,62437274,62442983,62449927,62451730,62467131,62470250,62474416,62476683,62483101,62484010,62485419,62487771,62489302,62490115,62493998,62504667,62504858,62506241,62515388,62550367,62551223,62561136,62591577,62601764,62627154	62412929,62437417,62443083,62449999,62451933,62467263,62470308,62474464,62476753,62483293,62484162,62485462,62487861,62489349,62490220,62494124,62504700,62504898,62506357,62515501,62550462,62551336,62561257,62591672,62601848,62628577	Gene ID= ENSG00000086200.16 TPM= 2.9 Transcript Type= NA
chr5	64718144	64768685	64718144	64768685	-	ENST00000513458.8@SREK1IP1	ENST00000513458.8	protein_coding	64768505,64754315,64741057,64728107,64718144	64768685,64754362,64741200,64728179,64724573	Gene ID= ENSG00000153006.15 TPM= 4.83 Transcript Type= protein_coding
chr5	64768918	64885506	64768918	64885506	+	transcript1003.chr5.nic@CWC27	transcript1003.chr5.nic	protein_coding	64768918,64774691,64781921,64783836,64785481,64786524,64788951,64800248,64801302,64804229,64885443	64769188,64774787,64782033,64783979,64785579,64786627,64789020,64800327,64801332,64804386,64885506	Gene ID= ENSG00000153015.15 TPM= 1.93 Transcript Type= NA
chr5	65563239	65587549	65563239	65587549	+	ENST00000261308.9@PPWD1	ENST00000261308.9	protein_coding	65563239,65567513,65569632,65569878,65571839,65576879,65579424,65583038,65585014,65585999,65587253	65563506,65567615,65569732,65569998,65572286,65577069,65579613,65583219,65585095,65586181,65587549	Gene ID= ENSG00000113593.11 TPM= 35.72 Transcript Type= protein_coding
chr5	65563285	65587549	65563285	65587549	+	transcript1006.chr5.nic@PPWD1	transcript1006.chr5.nic	protein_coding	65563285,65567513,65569878,65571839,65576879,65579424,65583038,65585014,65585999,65587253	65563506,65569732,65569998,65572286,65577069,65579613,65583219,65585095,65586181,65587549	Gene ID= ENSG00000113593.11 TPM= 1.93 Transcript Type= NA
chr5	65563296	65587549	65563296	65587549	+	transcript1008.chr5.nnic@PPWD1	transcript1008.chr5.nnic	protein_coding	65563296,65576879,65579424,65583038,65585014,65585999,65587253	65563506,65577069,65579613,65583219,65585095,65586181,65587549	Gene ID= ENSG00000113593.11 TPM= 8.69 Transcript Type= NA
chr5	65589680	65624646	65589680	65624646	-	ENST00000231524.13@TRIM23	ENST00000231524.13	protein_coding	65624194,65618093,65614098,65611603,65610861,65609243,65604911,65597051,65596421,65594521,65589680	65624646,65618255,65614219,65611881,65611043,65609458,65605045,65597180,65596531,65594645,65591948	Gene ID= ENSG00000113595.14 TPM= 5.79 Transcript Type= protein_coding
chr5	65625034	65664764	65625034	65664764	+	ENST00000438419.6@TRAPPC13	ENST00000438419.6	protein_coding	65625034,65635301,65635944,65637696,65647055,65650810,65652501,65655636,65658368,65660699,65662050,65664234,65664504	65625106,65635369,65636043,65637780,65647182,65650882,65652545,65655653,65658501,65660897,65662150,65664384,65664764	Gene ID= ENSG00000113597.17 TPM= 1.93 Transcript Type= protein_coding
chr5	65624765	65630891	65624765	65630891	+	ENST00000510585.2@AC008560.1	ENST00000510585.2	protein_coding	65624765,65629468	65625106,65630891	Gene ID= ENSG00000253251.2 TPM= 1.93 Transcript Type= protein_coding
chr5	65722174	65824681	65722174	65824681	+	transcript1025.chr5.nic@NLN	transcript1025.chr5.nic	protein_coding	65722174,65758567,65762960,65777427,65780179,65781261,65785775,65788118,65792454,65809515,65810037,65812255,65822781	65722414,65758826,65763108,65777534,65780281,65781421,65785910,65788484,65792601,65809701,65810165,65812391,65824681	Gene ID= ENSG00000123213.22 TPM= 3.86 Transcript Type= NA
chr5	65925765	66080516	65925765	66080516	+	transcript1035.chr5.nic@ERBIN	transcript1035.chr5.nic	protein_coding	65925765,65988635,65992710,65994747,66012049,66013549,66014669,66021322,66023290,66024306,66025480,66025848,66026302,66028274,66038383,66043077,66044137,66046353,66048667,66050783,66053406,66076316,66076875,66078423	65926806,65988682,65992907,65994864,66012127,66013638,66014725,66021385,66023364,66024450,66025552,66025977,66026417,66028343,66038482,66043198,66044298,66046538,66048781,66050966,66054951,66076408,66076949,66080516	Gene ID= ENSG00000112851.14 TPM= 6.52 Transcript Type= NA
chr5	65925765	66048844	65925765	66048844	+	transcript1039.chr5.nic@ERBIN	transcript1039.chr5.nic	protein_coding	65925765,65988635,65992710,65994747,66012049,66013549,66014669,66021322,66023290,66024306,66025480,66025848,66026302,66028274,66038383,66043077,66044137,66046353,66048667	65926806,65988682,65992907,65994864,66012127,66013638,66014725,66021385,66023364,66024450,66025552,66025977,66026417,66028343,66038482,66043198,66044298,66046538,66048844	Gene ID= ENSG00000112851.14 TPM= 2.49 Transcript Type= NA
chr5	65925765	66046390	65925765	66046390	+	transcript1041.chr5.nic@ERBIN	transcript1041.chr5.nic	protein_coding	65925765,65988635,65992710,65994747,66012049,66013549,66014669,66021322,66023290,66024306,66025480,66025848,66026302,66028274,66038383,66043077,66044137,66046353	65926806,65988682,65992907,65994864,66012127,66013638,66014725,66021385,66023364,66024450,66025552,66025977,66026417,66028343,66038482,66043198,66044310,66046390	Gene ID= ENSG00000112851.14 TPM= 4.42 Transcript Type= NA
chr5	65926475	66082549	65926475	66082549	+	ENST00000284037.9@ERBIN	ENST00000284037.9	protein_coding	65926475,65988635,65992710,65994747,66012049,66013549,66014669,66021322,66023290,66024306,66025480,66025848,66026302,66028274,66038383,66043077,66044137,66046353,66048667,66050783,66053406,66072169,66075024,66076316,66076875,66078423	65926806,65988682,65992907,65994864,66012127,66013638,66014725,66021385,66023364,66024450,66025552,66025977,66026417,66028343,66038482,66043198,66044310,66046538,66048781,66050966,66054951,66072291,66075230,66076408,66076949,66082549	Gene ID= ENSG00000112851.14 TPM= 5.31 Transcript Type= protein_coding
chr5	66144296	66175041	66144296	66175041	+	transcript1051.chr5.nic@SREK1	transcript1051.chr5.nic	protein_coding	66144296,66153463,66159219,66162109,66162414,66163792,66164783,66170051,66170585,66174946	66144537,66153596,66159334,66162273,66162592,66163922,66164897,66170170,66170947,66175041	Gene ID= ENSG00000153914.15 TPM= 4.83 Transcript Type= NA
chr5	66144324	66175041	66144324	66175041	+	transcript1054.chr5.nnic@SREK1	transcript1054.chr5.nnic	protein_coding	66144324,66153463,66159219,66162109,66162414,66163792,66164783,66170051,66174946	66144537,66153596,66159334,66162273,66162592,66163922,66164897,66170170,66175041	Gene ID= ENSG00000153914.15 TPM= 1.93 Transcript Type= NA
chr5	67456201	67460657	67456201	67460657	+	transcript1074.chr5.nnic@NA	transcript1074.chr5.nnic	NA	67456201	67460657	Gene ID= novel_gene_chr5_1075 TPM= 101.36 Transcript Type= NA
chr5	67461371	67462512	67461371	67462512	-	transcript1078.chr5.nnic@NA	transcript1078.chr5.nnic	NA	67461371	67462512	Gene ID= novel_gene_chr5_1079 TPM= 1.93 Transcript Type= NA
chr5	67465035	67475592	67465035	67475592	-	ENST00000515184.1@AC079467.1	ENST00000515184.1	processed_transcript	67475415,67467906,67466873,67465035	67475592,67468053,67466938,67465327	Gene ID= ENSG00000250978.5 TPM= 4.83 Transcript Type= retained_intron
chr5	67464784	67466097	67464784	67466097	-	transcript1080.chr5.nnic@NA	transcript1080.chr5.nnic	NA	67464784	67466097	Gene ID= novel_gene_chr5_1081 TPM= 1.93 Transcript Type= NA
chr5	67472534	67475477	67472534	67475477	-	transcript1076.chr5.nnic@NA	transcript1076.chr5.nnic	NA	67472534	67475477	Gene ID= novel_gene_chr5_1077 TPM= 1.93 Transcript Type= NA
chr5	68290637	68298583	68290637	68298583	+	ENST00000336483.9@PIK3R1	ENST00000336483.9	protein_coding	68290637,68292259,68293101,68293303,68293709,68294536,68295148,68295420,68296171,68297412	68290834,68292361,68293199,68293483,68293834,68294678,68295324,68295488,68296341,68298583	Gene ID= ENSG00000145675.14 TPM= 1.93 Transcript Type= protein_coding
chr5	68292568	68298756	68292568	68298756	+	ENST00000523872.1@PIK3R1	ENST00000523872.1	protein_coding	68292568,68293101,68293303,68293709,68294536,68295148,68295420,68296171,68297412	68292729,68293199,68293483,68293834,68294678,68295324,68295488,68296341,68298756	Gene ID= ENSG00000145675.14 TPM= 1.93 Transcript Type= protein_coding
chr5	68215776	68298753	68215776	68298753	+	ENST00000521657.5@PIK3R1	ENST00000521657.5	protein_coding	68215776,68226290,68273390,68273939,68279602,68280528,68280927,68292259,68293101,68293303,68293709,68294536,68295148,68295420,68296171,68297412	68215953,68227009,68273482,68274013,68279733,68280729,68281006,68292361,68293199,68293483,68293834,68294678,68295324,68295488,68296341,68298753	Gene ID= ENSG00000145675.14 TPM= 82.05 Transcript Type= protein_coding
chr5	68288368	68298583	68288368	68298583	+	ENST00000320694.12@PIK3R1	ENST00000320694.12	protein_coding	68288368,68292259,68293101,68293303,68293709,68294536,68295148,68295420,68296171,68297412	68288751,68292361,68293199,68293483,68293834,68294678,68295324,68295488,68296341,68298583	Gene ID= ENSG00000145675.14 TPM= 4.83 Transcript Type= protein_coding
chr5	68297856	68301512	68297856	68301512	+	transcript1106.chr5.nnic@NA	transcript1106.chr5.nnic	NA	68297856	68301512	Gene ID= novel_gene_chr5_1107 TPM= 2.9 Transcript Type= NA
chr5	69093646	69131069	69093646	69131069	+	ENST00000396591.7@SLC30A5	ENST00000396591.7	protein_coding	69093646,69100807,69103062,69104631,69108349,69113140,69114420,69115237,69115926,69116394,69117239,69118499,69121694,69123199,69128004,69129447	69094338,69100929,69103128,69104716,69108436,69113227,69114496,69115407,69116214,69116602,69117396,69118628,69121895,69123425,69128132,69131069	Gene ID= ENSG00000145740.18 TPM= 10.62 Transcript Type= protein_coding
chr5	69093995	69130263	69093995	69130263	+	transcript1118.chr5.nic@SLC30A5	transcript1118.chr5.nic	protein_coding	69093995,69103062,69104631,69108349,69113140,69114420,69115237,69115926,69116394,69117239,69118499,69121694,69123199,69128004,69129447	69094338,69103128,69104716,69108436,69113227,69114496,69115407,69116214,69116602,69117396,69118628,69121895,69123425,69128132,69130263	Gene ID= ENSG00000145740.18 TPM= 2.9 Transcript Type= NA
chr5	69093991	69104740	69093991	69104740	+	ENST00000380860.8@SLC30A5	ENST00000380860.8	protein_coding	69093991,69100807,69103062,69103962	69094338,69100929,69103128,69104740	Gene ID= ENSG00000145740.18 TPM= 12.55 Transcript Type= protein_coding
chr5	69167010	69178245	69167010	69178245	+	ENST00000256442.9@CCNB1	ENST00000256442.9	protein_coding	69167010,69167908,69168173,69171270,69174251,69174877,69175397,69177239,69177524	69167283,69168078,69168343,69171452,69174409,69175113,69175537,69177349,69178245	Gene ID= ENSG00000134057.14 TPM= 1.93 Transcript Type= protein_coding
chr5	69189533	69202671	69189533	69202671	+	transcript1133.chr5.nic@CENPH	transcript1133.chr5.nic	protein_coding	69189533,69191795,69194647,69195717,69197053,69202506	69189768,69191850,69194695,69195791,69197109,69202671	Gene ID= ENSG00000153044.9 TPM= 1.93 Transcript Type= NA
chr5	69189548	69210357	69189548	69210357	+	ENST00000283006.6@CENPH	ENST00000283006.6	protein_coding	69189548,69191795,69194647,69195717,69197053,69202506,69202919,69208196,69209707	69189768,69191850,69194695,69195791,69197109,69202569,69202970,69208359,69210357	Gene ID= ENSG00000153044.9 TPM= 6.76 Transcript Type= protein_coding
chr5	69217760	69230129	69217760	69230129	+	ENST00000256441.4@MRPS36	ENST00000256441.4	protein_coding	69217760,69226338,69228200,69229208	69217871,69226401,69228387,69230129	Gene ID= ENSG00000134056.11 TPM= 7.72 Transcript Type= protein_coding
chr5	69350984	69369542	69350984	69369542	-	ENST00000380822.8@AK6	ENST00000380822.8	protein_coding	69369463,69366503,69355895,69355649,69350984	69369542,69366595,69355953,69355794,69352253	Gene ID= ENSG00000085231.13 TPM= 1.93 Transcript Type= protein_coding
chr5	69364744	69370013	69364744	69370013	-	ENST00000328663.8@TAF9	ENST00000328663.8	protein_coding	69369657,69366503,69364744	69370013,69366595,69365754	Gene ID= ENSG00000273841.4 TPM= 9.65 Transcript Type= protein_coding
chr5	69369787	69414799	69369787	69414799	+	transcript1145.chr5.nic@RAD17	transcript1145.chr5.nic	protein_coding	69369787,69371035,69371454,69372034,69373830,69374628,69381901,69384797,69386043,69386180,69386396,69389034,69391831,69393155,69393354,69396397,69400049,69410493,69414031	69370284,69371171,69371557,69372217,69374087,69374711,69382057,69384933,69386095,69386305,69386465,69389145,69392013,69393240,69393500,69396546,69400169,69410550,69414799	Gene ID= ENSG00000152942.18 TPM= 3.86 Transcript Type= NA
chr5	69369825	69414801	69369825	69414801	+	ENST00000354312.7@RAD17	ENST00000354312.7	protein_coding	69369825,69371035,69372034,69373830,69374628,69381901,69384797,69386043,69386180,69386396,69389034,69391831,69393155,69393354,69396397,69400049,69410493,69414031	69369933,69371171,69372217,69374087,69374711,69382057,69384933,69386095,69386305,69386465,69389145,69392013,69393240,69393500,69396546,69400169,69410550,69414801	Gene ID= ENSG00000152942.18 TPM= 4.83 Transcript Type= protein_coding
chr5	70025247	70032696	70025247	70032696	+	ENST00000380751.9@SERF1B	ENST00000380751.9	protein_coding	70025247,70026407,70032315	70025458,70026515,70032696	Gene ID= ENSG00000205572.9 TPM= 26.06 Transcript Type= protein_coding
chr5	70025269	70043113	70025269	70043113	+	ENST00000380750.7@SERF1B	ENST00000380750.7	protein_coding	70025269,70026407,70041524	70025458,70026515,70043113	Gene ID= ENSG00000205572.9 TPM= 1.93 Transcript Type= protein_coding
chr5	70049612	70077592	70049612	70077592	+	ENST00000380743.8@SMN2	ENST00000380743.8	protein_coding	70049612,70063415,70065965,70066934,70067294,70069235,70070641,70076521,70077019	70049766,70063486,70066084,70067134,70067446,70069330,70070751,70076574,70077592	Gene ID= ENSG00000205571.13 TPM= 5.79 Transcript Type= protein_coding
chr5	70049654	70077592	70049654	70077592	+	ENST00000626847.2@SMN2	ENST00000626847.2	protein_coding	70049654,70063415,70065965,70066934,70067294,70069235,70070641,70077019	70049766,70063486,70066084,70067134,70067446,70069330,70070751,70077592	Gene ID= ENSG00000205571.13 TPM= 12.55 Transcript Type= protein_coding
chr5	70925030	70953012	70925030	70953012	+	ENST00000380707.8@SMN1	ENST00000380707.8	protein_coding	70925030,70938839,70941389,70942358,70942718,70944658,70946066,70951941,70952439	70925184,70938910,70941508,70942558,70942870,70944753,70946176,70951994,70953012	Gene ID= ENSG00000172062.16 TPM= 20.27 Transcript Type= protein_coding
chr5	71055030	71067686	71055030	71067686	-	transcript1183.chr5.nnic@GTF2H2	transcript1183.chr5.nnic	protein_coding	71067655,71065125,71062708,71061688,71061272,71060844,71060120,71059690,71055030	71067686,71065222,71062796,71061765,71061308,71060930,71060170,71059744,71055457	Gene ID= ENSG00000145736.14 TPM= 2.9 Transcript Type= NA
chr5	71055030	71067689	71055030	71067689	-	ENST00000523003.5@GTF2H2	ENST00000523003.5	protein_coding	71067655,71062708,71061688,71061272,71060844,71060120,71059690,71055030	71067689,71062796,71061765,71061308,71060930,71060170,71059744,71055457	Gene ID= ENSG00000145736.14 TPM= 4.83 Transcript Type= retained_intron
chr5	71455615	71567820	71455615	71567820	+	ENST00000358731.8@BDP1	ENST00000358731.8	protein_coding	71455615,71458579,71461817,71464058,71466096,71467354,71470395,71483842,71486484,71489404,71490984,71495250,71497270,71501562,71502599,71504621,71509465,71512241,71513185,71514944,71516061,71517322,71522289,71522756,71523939,71532308,71539042,71539557,71541454,71542105,71544357,71545039,71548682,71549420,71553116,71556886,71559982,71562274,71564754	71456089,71458855,71461926,71464117,71466221,71467487,71470489,71483896,71486627,71489682,71491131,71495408,71497426,71501653,71502791,71504751,71511151,71512428,71513407,71515122,71516271,71517452,71522490,71522949,71524323,71532427,71539078,71539649,71541682,71542265,71544507,71545219,71548745,71549606,71553320,71556925,71560237,71562520,71567820	Gene ID= ENSG00000145734.18 TPM= 2.9 Transcript Type= protein_coding
chr5	71455676	71489569	71455676	71489569	+	transcript1193.chr5.nnic@BDP1	transcript1193.chr5.nnic	protein_coding	71455676,71458579,71461817,71464058,71466096,71467354,71470395,71483842,71486531,71489404	71456089,71458855,71461926,71464117,71466221,71467487,71470489,71483896,71486627,71489569	Gene ID= ENSG00000145734.18 TPM= 1.93 Transcript Type= NA
chr5	71587274	71658704	71587274	71658704	+	transcript1201.chr5.nic@MCCC2	transcript1201.chr5.nic	protein_coding	71587274,71592926,71596280,71599659,71602506,71604356,71632121,71634943,71635151,71641003,71643819,71646211,71649097,71650069,71652669,71656743	71587554,71592992,71596364,71599760,71602633,71604468,71632185,71635042,71635246,71641075,71643895,71646277,71649253,71650183,71652754,71658704	Gene ID= ENSG00000131844.15 TPM= 5.79 Transcript Type= NA
chr5	71587274	71641368	71587274	71641368	+	transcript1208.chr5.nic@MCCC2	transcript1208.chr5.nic	protein_coding	71587274,71592926,71596280,71599659,71602506,71604356,71632121,71634943,71635151,71641003	71587554,71592992,71596364,71599760,71602633,71604468,71632185,71635042,71635246,71641368	Gene ID= ENSG00000131844.15 TPM= 8.69 Transcript Type= NA
chr5	71640383	71657405	71640383	71657405	+	transcript1210.chr5.nic@MCCC2	transcript1210.chr5.nic	protein_coding	71640383,71643819,71646211,71649097,71650069,71652669,71656743	71641075,71643895,71646277,71649253,71650183,71652754,71657405	Gene ID= ENSG00000131844.15 TPM= 2.9 Transcript Type= NA
chr5	71587297	71658704	71587297	71658704	+	ENST00000340941.10@MCCC2	ENST00000340941.10	protein_coding	71587297,71592926,71596280,71599659,71602506,71604356,71626640,71632121,71634943,71635151,71641003,71643819,71646211,71649097,71650069,71652669,71656743	71587554,71592992,71596364,71599760,71602633,71604468,71626753,71632185,71635042,71635246,71641075,71643895,71646277,71649253,71650183,71652754,71658704	Gene ID= ENSG00000131844.15 TPM= 5.79 Transcript Type= protein_coding
chr5	72219409	72320261	72219409	72320261	-	ENST00000261413.9@MRPS27	ENST00000261413.9	protein_coding	72320149,72314081,72297632,72295531,72238014,72234119,72232443,72228266,72226057,72223683,72219409	72320261,72314158,72297702,72295589,72238128,72234197,72232558,72228368,72226199,72223850,72221148	Gene ID= ENSG00000113048.16 TPM= 74.81 Transcript Type= protein_coding
chr5	72219528	72320255	72219528	72320255	-	ENST00000457646.8@MRPS27	ENST00000457646.8	protein_coding	72320181,72314081,72297632,72295531,72238014,72234119,72232443,72228266,72226057,72223683,72219528	72320255,72314158,72297702,72295589,72238128,72234197,72232558,72228368,72226199,72223850,72221148	Gene ID= ENSG00000113048.16 TPM= 2.41 Transcript Type= protein_coding
chr5	72219528	72320257	72219528	72320257	-	transcript1221.chr5.nnic@MRPS27	transcript1221.chr5.nnic	protein_coding	72320149,72314081,72297632,72295531,72238014,72234119,72232443,72228266,72226057,72223683,72219528	72320257,72314158,72297702,72295589,72238128,72234197,72232558,72228368,72226199,72223916,72221148	Gene ID= ENSG00000113048.16 TPM= 4.83 Transcript Type= NA
chr5	72442652	72507727	72442652	72507727	-	ENST00000318442.5@ZNF366	ENST00000318442.5	protein_coding	72507251,72460165,72456404,72447243,72442652	72507727,72461510,72456595,72447417,72444291	Gene ID= ENSG00000178175.11 TPM= 10.62 Transcript Type= protein_coding
chr5	72816312	72916733	72816312	72916733	+	ENST00000337273.9@TNPO1	ENST00000337273.9	protein_coding	72816312,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303,72908709	72816752,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905445,72916733	Gene ID= ENSG00000083312.17 TPM= 8.21 Transcript Type= protein_coding
chr5	72816652	72905580	72816652	72905580	+	transcript1246.chr5.nic@TNPO1	transcript1246.chr5.nic	protein_coding	72816652,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303	72816752,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905580	Gene ID= ENSG00000083312.17 TPM= 3.38 Transcript Type= NA
chr5	72848121	72908951	72848121	72908951	+	transcript1251.chr5.nnic@TNPO1	transcript1251.chr5.nnic	protein_coding	72848121,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900974,72903709,72905303,72908709	72848251,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72901073,72903783,72905445,72908951	Gene ID= ENSG00000083312.17 TPM= 1.93 Transcript Type= NA
chr5	72848184	72908951	72848184	72908951	+	ENST00000506351.6@TNPO1	ENST00000506351.6	protein_coding	72848184,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303,72908709	72848251,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905445,72908951	Gene ID= ENSG00000083312.17 TPM= 27.99 Transcript Type= protein_coding
chr5	72955981	73090522	72955981	73090522	+	ENST00000430046.6@FCHO2	ENST00000430046.6	protein_coding	72955981,72968498,72989427,72990478,72990712,73006445,73015626,73017212,73034657,73037143,73041291,73051349,73052332,73054160,73054525,73056065,73058433,73063841,73068650,73074742,73077338,73078180,73081783,73082761,73087589,73088068	72956129,72968589,72989501,72990619,72990864,73006549,73015724,73017308,73034701,73037215,73041315,73051406,73052507,73054171,73054549,73056107,73058524,73063944,73068779,73074853,73077493,73078312,73081982,73082825,73087753,73090522	Gene ID= ENSG00000157107.13 TPM= 12.55 Transcript Type= protein_coding
chr5	73114695	73120480	73114695	73120480	-	transcript1272.chr5.nnic@NA	transcript1272.chr5.nnic	NA	73114695	73120480	Gene ID= novel_gene_chr5_1273 TPM= 3.86 Transcript Type= NA
chr5	73498408	73505495	73498408	73505495	+	ENST00000335895.12@BTF3	ENST00000335895.12	protein_coding	73498408,73499134,73502488,73502916,73504347,73505192	73498558,73499202,73502601,73503117,73504403,73505495	Gene ID= ENSG00000145741.15 TPM= 389.02 Transcript Type= protein_coding
chr5	73552335	73565686	73552335	73565686	-	ENST00000296785.7@ANKRA2	ENST00000296785.7	protein_coding	73565132,73562593,73561130,73557575,73555488,73554861,73554322,73553406,73552335	73565686,73562985,73561288,73557640,73555585,73554986,73554388,73553486,73552852	Gene ID= ENSG00000164331.9 TPM= 8.69 Transcript Type= protein_coding
chr5	73560537	73565372	73560537	73565372	-	transcript1288.chr5.nnic@ANKRA2	transcript1288.chr5.nnic	protein_coding	73565132,73562340,73560537	73565372,73562985,73561523	Gene ID= ENSG00000164331.9 TPM= 2.9 Transcript Type= NA
chr5	73565741	73581969	73565741	73581969	+	ENST00000296792.8@UTP15	ENST00000296792.8	protein_coding	73565741,73567262,73568235,73568420,73569497,73570586,73572489,73576952,73577856,73578751,73579017,73579317,73579877	73565912,73567434,73568327,73568604,73569675,73570711,73572624,73577036,73578005,73578852,73579150,73579375,73581969	Gene ID= ENSG00000164338.9 TPM= 5.79 Transcript Type= protein_coding
chr5	74685144	74721288	74685144	74721288	+	ENST00000261416.11@HEXB	ENST00000261416.11	protein_coding	74685144,74689328,74693639,74696693,74696996,74705219,74713506,74715510,74716587,74718291,74718797,74720428,74720643,74721118	74685559,74689473,74693704,74696739,74697106,74705320,74713635,74715690,74716673,74718363,74718971,74720518,74720747,74721288	Gene ID= ENSG00000049860.13 TPM= 101.36 Transcript Type= protein_coding
chr5	74721204	74767371	74721204	74767371	-	ENST00000296805.7@GFM2	ENST00000296805.7	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736796,74733022,74730260,74725941,74725640,74722379,74721204	74767371,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985,74733098,74730398,74726126,74725755,74722561,74721783	Gene ID= ENSG00000164347.17 TPM= 19.5 Transcript Type= protein_coding
chr5	74721258	74767149	74721258	74767149	-	transcript1303.chr5.nic@GFM2	transcript1303.chr5.nic	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736796,74733022,74725941,74725640,74722379,74721258	74767149,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985,74733098,74726126,74725755,74722561,74721783	Gene ID= ENSG00000164347.17 TPM= 5.98 Transcript Type= NA
chr5	74721258	74767149	74721258	74767149	-	transcript1305.chr5.nic@GFM2	transcript1305.chr5.nic	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738318,74736796,74733022,74725941,74725640,74722379,74721258	74767149,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738417,74736985,74733098,74726126,74725755,74722561,74721783	Gene ID= ENSG00000164347.17 TPM= 2.12 Transcript Type= NA
chr5	74736669	74767146	74736669	74767146	-	ENST00000427854.6@GFM2	ENST00000427854.6	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736669	74767146,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985	Gene ID= ENSG00000164347.17 TPM= 1.16 Transcript Type= protein_coding
chr5	74744403	74767149	74744403	74767149	-	transcript1315.chr5.nic@GFM2	transcript1315.chr5.nic	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74744403	74767149,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857	Gene ID= ENSG00000164347.17 TPM= 1.93 Transcript Type= NA
chr5	74721206	74767121	74721206	74767121	-	ENST00000345239.6@GFM2	ENST00000345239.6	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738318,74736796,74733022,74730260,74725941,74725640,74722379,74721206	74767121,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738417,74736985,74733098,74730398,74726126,74725755,74722561,74721783	Gene ID= ENSG00000164347.17 TPM= 1.16 Transcript Type= protein_coding
chr5	74766992	74780113	74766992	74780113	+	ENST00000610426.4@NSA2	ENST00000610426.4	protein_coding	74766992,74768931,74769214,74770631,74773868,74776604	74767363,74769118,74769364,74770810,74774060,74780113	Gene ID= ENSG00000164346.9 TPM= 8.69 Transcript Type= protein_coding
chr5	75337168	75362104	75337168	75362104	+	ENST00000287936.8@HMGCR	ENST00000287936.8	protein_coding	75337168,75342583,75343853,75344245,75345574,75347204,75350042,75350258,75350789,75351068,75351424,75354503,75355056,75355365,75356343,75358657,75359170,75359398,75359985,75360288	75337300,75342770,75343964,75344332,75345658,75347309,75350148,75350374,75350949,75351315,75351602,75354697,75355214,75355522,75356448,75358827,75359310,75359556,75360139,75362104	Gene ID= ENSG00000113161.15 TPM= 2.9 Transcript Type= protein_coding
chr5	75372379	75511621	75372379	75511621	-	transcript1330.chr5.nnic@COL4A3BP	transcript1330.chr5.nnic	protein_coding	75511112,75505982,75459065,75426371,75425361,75419341,75416876,75411011,75402972,75400205,75399310,75389592,75385902,75384642,75381949,75381072,75379337,75376184,75372379	75511621,75506116,75459181,75426478,75425499,75419424,75417033,75411103,75403058,75400297,75399387,75389687,75386034,75384712,75382077,75381201,75379473,75376321,75374191	Gene ID= ENSG00000113163.15 TPM= 3.14 Transcript Type= NA
chr5	75368486	75511615	75368486	75511615	-	transcript1336.chr5.nic@COL4A3BP	transcript1336.chr5.nic	protein_coding	75511112,75505982,75459065,75426371,75425361,75419341,75416876,75411011,75402972,75400205,75399310,75389592,75385902,75384642,75381949,75381072,75379337,75368486	75511615,75506116,75459181,75426478,75425499,75419424,75417033,75411103,75403058,75400297,75399387,75389687,75386034,75384712,75382077,75381201,75379473,75368658	Gene ID= ENSG00000113163.15 TPM= 3.14 Transcript Type= NA
chr5	75504752	75511622	75504752	75511622	-	transcript1359.chr5.nic@COL4A3BP	transcript1359.chr5.nic	protein_coding	75511112,75504752	75511622,75506116	Gene ID= ENSG00000113163.15 TPM= 1.93 Transcript Type= NA
chr5	75374158	75511629	75374158	75511629	-	ENST00000261415.11@COL4A3BP	ENST00000261415.11	protein_coding	75511112,75505982,75459065,75426371,75425361,75419341,75416876,75411011,75402972,75400205,75389592,75385902,75384642,75381949,75381072,75379337,75374158	75511629,75506116,75459181,75426478,75425499,75419424,75417033,75411103,75403058,75400297,75389687,75386034,75384712,75382077,75381201,75379473,75374191	Gene ID= ENSG00000113163.15 TPM= 2.17 Transcript Type= protein_coding
chr5	75511879	75599102	75511879	75599102	+	transcript1346.chr5.nnic@POLK	transcript1346.chr5.nnic	protein_coding	75511879,75534828,75547010,75552472,75569340,75573738,75576780,75581209,75583293,75584760,75587026,75590344,75593878,75596222,75597747,75597934	75511914,75534964,75547157,75552591,75569492,75573869,75576933,75581448,75583417,75584926,75587058,75590440,75594049,75597178,75597789,75599102	Gene ID= ENSG00000122008.15 TPM= 5.07 Transcript Type= NA
chr5	75511756	75601144	75511756	75601144	+	ENST00000241436.8@POLK	ENST00000241436.8	protein_coding	75511756,75547010,75552472,75569340,75573738,75576780,75581209,75583293,75584760,75587026,75590344,75593878,75596222,75597747,75597934	75511914,75547157,75552591,75569492,75573869,75576933,75581448,75583417,75584926,75587058,75590440,75594049,75597178,75597789,75601144	Gene ID= ENSG00000122008.15 TPM= 7 Transcript Type= protein_coding
chr5	75510774	75599102	75510774	75599102	+	transcript1353.chr5.nnic@POLK	transcript1353.chr5.nnic	protein_coding	75510774,75552472,75569340,75573738,75576780,75581209,75583293,75584760,75587026,75590344,75593878,75596222,75597747,75597934	75511069,75552591,75569492,75573869,75576933,75581448,75583417,75584926,75587058,75590440,75594049,75597178,75597789,75599102	Gene ID= ENSG00000122008.15 TPM= 2.17 Transcript Type= NA
chr5	75511878	75599102	75511878	75599102	+	transcript1354.chr5.nic@POLK	transcript1354.chr5.nic	protein_coding	75511878,75547010,75552472,75569340,75573738,75576780,75581209,75583293,75584760,75587026,75590344,75596222,75597747,75597934	75511914,75547157,75552591,75569492,75573869,75576933,75581448,75583417,75584926,75587058,75590440,75597178,75597789,75599102	Gene ID= ENSG00000122008.15 TPM= 2.17 Transcript Type= NA
chr5	77030376	77055552	77030376	77055552	+	transcript1372.chr5.nic@AGGF1	transcript1372.chr5.nic	protein_coding	77030376,77034418,77035541,77036556,77039531,77046347,77048161,77048936,77052706,77053965,77055514	77030976,77034520,77035743,77036720,77039719,77046677,77048272,77048987,77052807,77054130,77055552	Gene ID= ENSG00000164252.12 TPM= 6.76 Transcript Type= NA
chr5	77030385	77065234	77030385	77065234	+	ENST00000312916.11@AGGF1	ENST00000312916.11	protein_coding	77030385,77034418,77035541,77036556,77039531,77046347,77048161,77048936,77052706,77053965,77055514,77059616,77061703,77063052	77030976,77034520,77035743,77036720,77039719,77046677,77048272,77048987,77052807,77054130,77055596,77059743,77061802,77065234	Gene ID= ENSG00000164252.12 TPM= 17.38 Transcript Type= protein_coding
chr5	77072072	77087323	77072072	77087323	-	ENST00000255198.2@ZBED3	ENST00000255198.2	protein_coding	77087111,77078594,77072072	77087323,77078728,77077895	Gene ID= ENSG00000132846.5 TPM= 10.62 Transcript Type= protein_coding
chr5	77180306	77427418	77180306	77427418	+	transcript1382.chr5.nnic@PDE8B	transcript1382.chr5.nnic	protein_coding	77180306,77311994,77325539,77328998,77331402,77337227,77344853,77349419,77351065,77353346,77400248,77404720,77407381,77408893,77411676,77412100,77413111,77418229,77419767,77421821,77425767,77426445	77180486,77312053,77325729,77329057,77331459,77337315,77344931,77349559,77351153,77353406,77400290,77404797,77407457,77409057,77411721,77412235,77413309,77418446,77419887,77421988,77425896,77427418	Gene ID= ENSG00000113231.13 TPM= 1.93 Transcript Type= NA
chr5	77430933	77492596	77430933	77492596	-	ENST00000296679.8@WDR41	ENST00000296679.8	protein_coding	77492170,77489457,77464761,77463095,77459062,77453817,77451291,77449760,77440813,77438240,77437336,77436261,77430933	77492596,77489572,77464809,77463226,77459124,77453928,77451353,77449870,77440997,77438361,77437424,77436394,77433287	Gene ID= ENSG00000164253.13 TPM= 4.83 Transcript Type= protein_coding
chr5	77691166	77776361	77691166	77776361	-	ENST00000380377.8@TBCA	ENST00000380377.8	protein_coding	77776205,77708242,77693266,77691166	77776361,77708347,77693352,77691498	Gene ID= ENSG00000171530.13 TPM= 49.23 Transcript Type= protein_coding
chr5	77691267	77776261	77691267	77776261	-	ENST00000518338.6@TBCA	ENST00000518338.6	protein_coding	77776205,77708242,77705566,77693266,77691267	77776261,77708347,77705634,77693352,77691498	Gene ID= ENSG00000171530.13 TPM= 1.93 Transcript Type= protein_coding
chr5	78002328	78294744	78002328	78294744	-	transcript1413.chr5.nnic@AP3B1	transcript1413.chr5.nnic	protein_coding	78294452,78267520,78240862,78228144,78227372,78225542,78216055,78181507,78177339,78175784,78175626,78165610,78162819,78156258,78141143,78129121,78128030,78116126,78113752,78110207,78100953,78089393,78039043,78034361,78020692,78015410,78003459,78002328	78294744,78267595,78240936,78228239,78227532,78225608,78216237,78181662,78177436,78175838,78175697,78165672,78162951,78156367,78141319,78129307,78128160,78116234,78113923,78110354,78101025,78089499,78039274,78034445,78020789,78015548,78003494,78003055	Gene ID= ENSG00000132842.13 TPM= 11.58 Transcript Type= NA
chr5	78002326	78294692	78002326	78294692	-	ENST00000519295.5@AP3B1	ENST00000519295.5	protein_coding	78294440,78267520,78240862,78228144,78227372,78225542,78216055,78181507,78177339,78175784,78175626,78165610,78162819,78156258,78141143,78129121,78128030,78116126,78113752,78110207,78100953,78089393,78039043,78034361,78020692,78015410,78002326	78294692,78267595,78240936,78228239,78227532,78225608,78216237,78181662,78177436,78175838,78175697,78165672,78162951,78156367,78141319,78129307,78128160,78116234,78113923,78110354,78101025,78089499,78039274,78034445,78020789,78015548,78003055	Gene ID= ENSG00000132842.13 TPM= 4.83 Transcript Type= protein_coding
chr5	78360583	78479071	78360583	78479071	+	ENST00000621999.4@SCAMP1	ENST00000621999.4	protein_coding	78360583,78388837,78415520,78416541,78418775,78421801,78449933,78459245,78475504	78360728,78388914,78415618,78416649,78418903,78421960,78450034,78459362,78479071	Gene ID= ENSG00000085365.17 TPM= 3.86 Transcript Type= protein_coding
chr5	78485217	78648825	78485217	78648825	-	ENST00000380345.6@LHFPL2	ENST00000380345.6	protein_coding	78648499,78632264,78564813,78509784,78485217	78648825,78632368,78564871,78510398,78489153	Gene ID= ENSG00000145685.13 TPM= 4.83 Transcript Type= protein_coding
chr5	78984736	78986534	78984736	78986534	+	transcript1428.chr5.nnic@NA	transcript1428.chr5.nnic	NA	78984736	78986534	Gene ID= novel_gene_chr5_1429 TPM= 2.9 Transcript Type= NA
chr5	79069646	79089466	79069646	79089466	+	transcript1438.chr5.nnic@BHMT2	transcript1438.chr5.nnic	protein_coding	79069646,79077480,79079369,79080687,79083192,79083628,79088493	79069815,79077612,79079460,79080878,79083374,79083856,79089466	Gene ID= ENSG00000132840.9 TPM= 2.9 Transcript Type= NA
chr5	79236104	79306461	79236104	79306461	+	transcript1443.chr5.nic@JMY	transcript1443.chr5.nic	protein_coding	79236104,79277910,79290121,79291130,79300153,79300676,79306375	79237682,79278083,79290271,79291299,79300318,79300863,79306461	Gene ID= ENSG00000152409.8 TPM= 10.62 Transcript Type= NA
chr5	79372793	79514532	79372793	79514532	-	transcript1449.chr5.nnic@HOMER1	transcript1449.chr5.nnic	protein_coding	79512770,79456862,79450990,79447053,79439010,79401899,79397527,79396823,79376004,79372793	79514532,79457018,79451121,79447145,79439149,79402055,79397637,79396903,79376197,79373027	Gene ID= ENSG00000152413.14 TPM= 3.86 Transcript Type= NA
chr5	79375908	79481735	79375908	79481735	-	transcript1456.chr5.nnic@HOMER1	transcript1456.chr5.nnic	protein_coding	79481632,79456862,79450990,79447053,79439010,79401899,79397527,79396823,79375908	79481735,79457018,79451121,79447145,79439149,79402055,79397637,79396903,79376197	Gene ID= ENSG00000152413.14 TPM= 4.83 Transcript Type= NA
chr5	79438698	79514359	79438698	79514359	-	transcript1465.chr5.nic@HOMER1	transcript1465.chr5.nic	protein_coding	79512770,79456862,79450990,79447053,79438698	79514359,79457018,79451121,79447145,79439149	Gene ID= ENSG00000152413.14 TPM= 2.9 Transcript Type= NA
chr5	79433874	79435888	79433874	79435888	-	transcript1467.chr5.nnic@NA	transcript1467.chr5.nnic	NA	79433874	79435888	Gene ID= novel_gene_chr5_1468 TPM= 1.93 Transcript Type= NA
chr5	79547713	79579323	79547713	79579323	+	transcript1470.chr5.nnic@NA	transcript1470.chr5.nnic	NA	79547713,79574136,79579015	79547837,79574276,79579323	Gene ID= novel_gene_chr5_1471 TPM= 1.93 Transcript Type= NA
chr5	79612435	79686648	79612435	79686648	+	transcript1475.chr5.nnic@PAPD4	transcript1475.chr5.nnic	protein_coding	79612435,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79656958,79668892,79679579,79680919,79681982,79685199	79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79680984,79682061,79686648	Gene ID= ENSG00000164329.13 TPM= 3.38 Transcript Type= NA
chr5	79612420	79686648	79612420	79686648	+	ENST00000453514.5@PAPD4	ENST00000453514.5	protein_coding	79612420,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199	79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648	Gene ID= ENSG00000164329.13 TPM= 4.83 Transcript Type= protein_coding
chr5	79689775	79800222	79689775	79800222	+	transcript1506.chr5.nnic@CMYA5	transcript1506.chr5.nnic	protein_coding	79689775,79743827,79745222,79747091,79752676,79758753,79761811,79763062,79788971,79790970,79793437,79799370	79690056,79743922,79745455,79747113,79752794,79758902,79761957,79763209,79789104,79791069,79793610,79800222	Gene ID= ENSG00000164309.14 TPM= 221.22 Transcript Type= NA
chr5	79689877	79800222	79689877	79800222	+	ENST00000446378.2@CMYA5	ENST00000446378.2	protein_coding	79689877,79728915,79743827,79745222,79747091,79752676,79758753,79761811,79763062,79788971,79790970,79793437,79799370	79690056,79739403,79743922,79745455,79747113,79752794,79758902,79761957,79763209,79789104,79791069,79793610,79800222	Gene ID= ENSG00000164309.14 TPM= 332.55 Transcript Type= protein_coding
chr5	79689775	79729222	79689775	79729222	+	transcript1520.chr5.nic@CMYA5	transcript1520.chr5.nic	protein_coding	79689775,79728915	79690056,79729222	Gene ID= ENSG00000164309.14 TPM= 13.51 Transcript Type= NA
chr5	79689776	79729349	79689776	79729349	+	transcript1521.chr5.nic@CMYA5	transcript1521.chr5.nic	protein_coding	79689776,79728915	79690056,79729349	Gene ID= ENSG00000164309.14 TPM= 117.77 Transcript Type= NA
chr5	79689717	79729736	79689717	79729736	+	transcript1522.chr5.nic@CMYA5	transcript1522.chr5.nic	protein_coding	79689717,79728915	79690056,79729736	Gene ID= ENSG00000164309.14 TPM= 19.79 Transcript Type= NA
chr5	79689775	79730277	79689775	79730277	+	transcript1523.chr5.nic@CMYA5	transcript1523.chr5.nic	protein_coding	79689775,79728915	79690056,79730277	Gene ID= ENSG00000164309.14 TPM= 51.64 Transcript Type= NA
chr5	79689775	79732785	79689775	79732785	+	transcript1524.chr5.nic@CMYA5	transcript1524.chr5.nic	protein_coding	79689775,79728915	79690056,79732785	Gene ID= ENSG00000164309.14 TPM= 306 Transcript Type= NA
chr5	79730943	79736784	79730943	79736784	+	transcript1526.chr5.nnic@CMYA5	transcript1526.chr5.nnic	protein_coding	79730943,79733981	79733151,79736784	Gene ID= ENSG00000164309.14 TPM= 6.76 Transcript Type= NA
chr5	79979761	79991245	79979761	79991245	-	ENST00000512560.5@MTX3	ENST00000512560.5	protein_coding	79991158,79990160,79989152,79988462,79988239,79986950,79985571,79979761	79991245,79990236,79989244,79988644,79988315,79987107,79985659,79983794	Gene ID= ENSG00000177034.14 TPM= 5.79 Transcript Type= protein_coding
chr5	80035197	80083287	80035197	80083287	+	transcript1568.chr5.nnic@THBS4	transcript1568.chr5.nnic	protein_coding	80035197,80040077,80055785,80058206,80058708,80059440,80059703,80065409,80067973,80070306,80070643,80071021,80072278,80073275,80076855,80078049,80078921,80079062,80079905,80082406,80083080	80035625,80040280,80056032,80058314,80058790,80059491,80059905,80065477,80068125,80070410,80070750,80071180,80072396,80073327,80077048,80078227,80078969,80079258,80080077,80082545,80083287	Gene ID= ENSG00000113296.14 TPM= 5.31 Transcript Type= NA
chr5	80035348	80083287	80035348	80083287	+	ENST00000350881.6@THBS4	ENST00000350881.6	protein_coding	80035348,80040077,80055785,80058206,80058708,80059440,80059703,80061695,80065409,80067973,80070306,80070643,80071021,80072278,80073275,80076855,80078049,80078921,80079062,80079905,80082406,80083080	80035625,80040280,80056032,80058314,80058790,80059491,80059905,80061832,80065477,80068125,80070410,80070750,80071180,80072396,80073327,80077048,80078227,80078969,80079258,80080077,80082545,80083287	Gene ID= ENSG00000113296.14 TPM= 74.81 Transcript Type= protein_coding
chr5	80654648	80876460	80654648	80876460	+	ENST00000265081.6@MSH3	ENST00000265081.6	protein_coding	80654648,80656411,80665143,80670097,80672244,80672741,80674983,80678927,80725453,80728851,80741464,80744506,80761546,80767933,80768835,80775694,80778720,80787565,80792733,80813584,80854130,80864813,80873116,80875751	80654964,80656531,80665363,80670309,80672360,80672858,80675128,80679093,80725565,80728965,80741548,80744615,80761678,80768120,80769003,80775758,80778836,80787672,80792844,80813741,80854316,80864942,80873287,80876460	Gene ID= ENSG00000113318.9 TPM= 2.9 Transcript Type= protein_coding
chr5	81233290	81313154	81233290	81313154	+	transcript1590.chr5.nnic@CKMT2	transcript1590.chr5.nnic	protein_coding	81233290,81251113,81252695,81254396,81254993,81256915,81257733,81259120,81263491,81308561,81308946,81311211,81312544	81233377,81251284,81252893,81254491,81255214,81257000,81257856,81259254,81263616,81308711,81309038,81311279,81313154	Gene ID= ENSG00000131730.15 TPM= 25.46 Transcript Type= NA
chr5	81233324	81266397	81233324	81266397	+	ENST00000424301.6@CKMT2	ENST00000424301.6	protein_coding	81233324,81244042,81251113,81252695,81254396,81254993,81256915,81257733,81259120,81263491,81266139	81233377,81244205,81251284,81252893,81254491,81255214,81257000,81257856,81259254,81263616,81266397	Gene ID= ENSG00000131730.15 TPM= 108.11 Transcript Type= protein_coding
chr5	81233320	81266395	81233320	81266395	+	ENST00000437669.5@CKMT2	ENST00000437669.5	protein_coding	81233320,81251113,81252695,81254396,81254993,81256915,81257733,81259120,81263491,81266139	81233381,81251284,81252893,81254491,81255214,81257000,81257856,81259254,81263616,81266395	Gene ID= ENSG00000131730.15 TPM= 195.47 Transcript Type= protein_coding
chr5	81301624	81313154	81301624	81313154	+	ENST00000380199.9@ZCCHC9	ENST00000380199.9	protein_coding	81301624,81304741,81308561,81308946,81311211,81312544	81301670,81305141,81308711,81309038,81311279,81313154	Gene ID= ENSG00000131732.11 TPM= 2.9 Transcript Type= protein_coding
chr5	81413110	81416547	81413110	81416547	-	transcript1627.chr5.nnic@NA	transcript1627.chr5.nnic	NA	81413110	81416547	Gene ID= novel_gene_chr5_1628 TPM= 1.93 Transcript Type= NA
chr5	81413021	81751253	81413021	81751253	-	ENST00000320672.8@SSBP2	ENST00000320672.8	protein_coding	81750981,81650267,81636557,81615473,81513628,81489250,81474496,81473700,81466974,81461055,81448790,81446868,81442653,81440558,81437430,81428585,81413021	81751253,81650339,81636618,81615557,81513717,81489309,81474562,81473770,81467041,81461103,81448825,81446922,81442723,81440636,81437458,81428683,81420533	Gene ID= ENSG00000145687.16 TPM= 16.41 Transcript Type= protein_coding
chr5	81419937	81751051	81419937	81751051	-	transcript1631.chr5.nic@SSBP2	transcript1631.chr5.nic	protein_coding	81750981,81650267,81636557,81615473,81513628,81489250,81474496,81473700,81466974,81461055,81448790,81446868,81442653,81440558,81437430,81419937	81751051,81650339,81636618,81615557,81513717,81489309,81474562,81473770,81467041,81461103,81448825,81446922,81442723,81440636,81437458,81420533	Gene ID= ENSG00000145687.16 TPM= 1.93 Transcript Type= NA
chr5	81972025	82256139	81972025	82256139	+	ENST00000282185.7@ATG10	ENST00000282185.7	protein_coding	81972025,81987559,82058495,82164399,82178490,82252562,82253314,82254068	81972306,81987678,82058602,82164537,82178587,82252659,82253429,82256139	Gene ID= ENSG00000152348.15 TPM= 2.9 Transcript Type= protein_coding
chr5	82273358	82278577	82273358	82278577	-	ENST00000296674.12@RPS23	ENST00000296674.12	protein_coding	82278320,82277693,82276398,82273358	82278577,82277852,82276518,82276255	Gene ID= ENSG00000186468.12 TPM= 330.14 Transcript Type= protein_coding
chr5	83052846	83077496	83052846	83077496	-	ENST00000502346.1@TMEM167A	ENST00000502346.1	protein_coding	83077321,83065008,83061877,83052846	83077496,83065117,83061911,83057154	Gene ID= ENSG00000174695.9 TPM= 42.47 Transcript Type= protein_coding
chr5	83077527	83353711	83077527	83353711	+	ENST00000338635.10@XRCC4	ENST00000338635.10	protein_coding	83077527,83104910,83111028,83195770,83203552,83204815,83258530,83353125	83077615,83105058,83111203,83195936,83203707,83204921,83258677,83353711	Gene ID= ENSG00000152422.15 TPM= 1.93 Transcript Type= protein_coding
chr5	83471777	83539684	83471777	83539684	+	ENST00000513960.5@VCAN	ENST00000513960.5	protein_coding	83471777,83483513,83490098,83493546,83493804,83512103,83537007	83472023,83483588,83490472,83493720,83493931,83512396,83539684	Gene ID= ENSG00000038427.15 TPM= 1.93 Transcript Type= protein_coding
chr5	83471674	83582303	83471674	83582303	+	ENST00000343200.9@VCAN	ENST00000343200.9	protein_coding	83471674,83483513,83490098,83493546,83493804,83512103,83537007,83545537,83547971,83553364,83554956,83572416,83579980,83580307	83472023,83483588,83490472,83493720,83493931,83512396,83542268,83545650,83548084,83553522,83555038,83572560,83580162,83582303	Gene ID= ENSG00000038427.15 TPM= 2.9 Transcript Type= protein_coding
chr5	86617904	86620962	86617904	86620962	+	ENST00000247655.3@COX7C	ENST00000247655.3	protein_coding	86617904,86619353,86620668	86618130,86619496,86620962	Gene ID= ENSG00000127184.12 TPM= 501 Transcript Type= protein_coding
chr5	86617928	86620766	86617928	86620766	+	ENST00000511472.5@COX7C	ENST00000511472.5	protein_coding	86617928,86619353,86620668	86618053,86619496,86620766	Gene ID= ENSG00000127184.12 TPM= 30.89 Transcript Type= processed_transcript
chr5	87268247	87391919	87268247	87391919	+	transcript1667.chr5.nnic@RASA1	transcript1667.chr5.nnic	protein_coding	87268247,87331348,87332507,87333267,87337974,87341290,87346672,87349214,87353157,87362551,87363348,87369813,87372118,87374840,87376393,87376881,87378396,87379735,87380509,87383713,87385301,87386826,87389393,87390800	87268990,87331500,87332642,87333337,87338091,87341321,87346724,87349364,87353235,87362671,87363504,87369900,87372195,87374916,87376565,87377040,87378538,87379850,87380595,87383780,87385389,87386903,87389527,87391919	Gene ID= ENSG00000145715.14 TPM= 3.86 Transcript Type= NA
chr5	87394265	87413019	87394265	87413019	-	ENST00000256897.8@CCNH	ENST00000256897.8	protein_coding	87412678,87411224,87409290,87407976,87404844,87401702,87399394,87395044,87394265	87413019,87411346,87409363,87408186,87405007,87401772,87399505,87395104,87394484	Gene ID= ENSG00000134480.13 TPM= 45.69 Transcript Type= protein_coding
chr5	87394274	87412952	87394274	87412952	-	transcript1673.chr5.nic@CCNH	transcript1673.chr5.nic	protein_coding	87412678,87411224,87409290,87407976,87401702,87399394,87395044,87394274	87412952,87411346,87409363,87408186,87401772,87399505,87395104,87394484	Gene ID= ENSG00000134480.13 TPM= 2.25 Transcript Type= NA
chr5	87394274	87412904	87394274	87412904	-	ENST00000504878.1@CCNH	ENST00000504878.1	protein_coding	87412435,87411224,87409290,87407976,87404844,87401702,87399394,87395044,87394274	87412904,87411346,87409363,87408186,87405007,87401772,87399505,87395104,87394484	Gene ID= ENSG00000134480.13 TPM= 9.01 Transcript Type= protein_coding
chr5	88195206	88268868	88195206	88268868	-	transcript1679.chr5.nic@TMEM161B	transcript1679.chr5.nic	protein_coding	88268721,88240813,88228445,88220563,88207029,88206439,88205814,88202962,88198976,88197669,88195206	88268868,88240916,88228528,88220719,88207180,88206499,88205954,88203075,88199150,88197765,88196488	Gene ID= ENSG00000164180.13 TPM= 2.9 Transcript Type= NA
chr5	88195207	88268868	88195207	88268868	-	transcript1681.chr5.nic@TMEM161B	transcript1681.chr5.nic	protein_coding	88268721,88240813,88228445,88225769,88220563,88207029,88206439,88205814,88202962,88198976,88195207	88268868,88240916,88228528,88225866,88220719,88207180,88206499,88205954,88203075,88199150,88196488	Gene ID= ENSG00000164180.13 TPM= 4.83 Transcript Type= NA
chr5	88195206	88268848	88195206	88268848	-	ENST00000296595.10@TMEM161B	ENST00000296595.10	protein_coding	88268721,88240813,88228445,88225769,88220563,88207029,88206439,88205814,88202962,88198976,88197669,88195206	88268848,88240916,88228528,88225866,88220719,88207180,88206499,88205954,88203075,88199150,88197765,88196488	Gene ID= ENSG00000164180.13 TPM= 6.76 Transcript Type= protein_coding
chr5	88268916	88436685	88268916	88436685	+	ENST00000504922.5@TMEM161B-AS1	ENST00000504922.5	antisense_RNA	88268916,88270526,88436273	88269027,88270585,88436685	Gene ID= ENSG00000247828.7 TPM= 6.76 Transcript Type= antisense_RNA
chr5	88269024	88273172	88269024	88273172	+	transcript1702.chr5.nic@TMEM161B-AS1	transcript1702.chr5.nic	antisense_RNA	88269024,88270526	88269119,88273172	Gene ID= ENSG00000247828.7 TPM= 1.93 Transcript Type= NA
chr5	88720337	88904136	88720337	88904136	-	transcript1704.chr5.nic@MEF2C	transcript1704.chr5.nic	protein_coding	88903916,88887502,88823735,88804598,88760988,88751857,88749070,88731729,88729218,88728493,88720337	88904136,88887598,88823930,88804801,88761125,88752043,88749117,88731901,88729347,88728628,88722829	Gene ID= ENSG00000081189.15 TPM= 9.82 Transcript Type= NA
chr5	88718241	88904257	88718241	88904257	-	ENST00000424173.6@MEF2C	ENST00000424173.6	protein_coding	88903916,88887502,88823735,88804598,88760988,88751857,88749070,88731729,88729218,88728493,88718241	88904257,88887598,88823930,88804801,88761125,88752043,88749117,88731901,88729347,88728628,88722925	Gene ID= ENSG00000081189.15 TPM= 2.25 Transcript Type= protein_coding
chr5	88720337	88883466	88720337	88883466	-	ENST00000437473.6@MEF2C	ENST00000437473.6	protein_coding	88882955,88823735,88804598,88761185,88751857,88749070,88731729,88730211,88729218,88728493,88720337	88883466,88823927,88804801,88761328,88752043,88749117,88731901,88730234,88729347,88728628,88722925	Gene ID= ENSG00000081189.15 TPM= 7.56 Transcript Type= protein_coding
chr5	88721570	88883224	88721570	88883224	-	ENST00000514015.5@MEF2C	ENST00000514015.5	protein_coding	88882955,88823735,88804598,88761185,88751857,88749070,88731729,88730211,88729218,88728493,88721570	88883224,88823930,88804801,88761328,88752043,88749117,88731901,88730234,88729347,88728628,88722829	Gene ID= ENSG00000081189.15 TPM= 2.9 Transcript Type= protein_coding
chr5	89218316	89219846	89218316	89219846	+	transcript1741.chr5.nnic@NA	transcript1741.chr5.nnic	NA	89218316	89219846	Gene ID= novel_gene_chr5_1742 TPM= 1.93 Transcript Type= NA
chr5	90458203	90474768	90458203	90474768	-	ENST00000316610.6@MBLAC2	ENST00000316610.6	protein_coding	90473839,90458203	90474768,90461552	Gene ID= ENSG00000176055.9 TPM= 4.83 Transcript Type= protein_coding
chr5	90515626	90529581	90515626	90529581	-	ENST00000315948.10@LYSMD3	ENST00000315948.10	protein_coding	90529448,90525035,90515626	90529581,90525300,90519484	Gene ID= ENSG00000176018.12 TPM= 14.48 Transcript Type= protein_coding
chr5	91310627	91314427	91310627	91314427	-	transcript1770.chr5.nnic@AC123595.2	transcript1770.chr5.nnic	lincRNA	91314080,91313638,91310627	91314427,91313777,91311032	Gene ID= ENSG00000271762.1 TPM= 1.93 Transcript Type= NA
chr5	91368724	91383321	91368724	91383321	-	transcript1772.chr5.nnic@ARRDC3	transcript1772.chr5.nnic	protein_coding	91382813,91378694,91376621,91375511,91374922,91374114,91373684,91368724	91383321,91378775,91376768,91375613,91375178,91374276,91373876,91371456	Gene ID= ENSG00000113369.8 TPM= 3.86 Transcript Type= NA
chr5	91377572	91383321	91377572	91383321	-	transcript1773.chr5.nic@ARRDC3	transcript1773.chr5.nic	protein_coding	91382813,91377572	91383321,91378775	Gene ID= ENSG00000113369.8 TPM= 1.93 Transcript Type= NA
chr5	91368724	91383359	91368724	91383359	-	ENST00000265138.3@ARRDC3	ENST00000265138.3	protein_coding	91382813,91378694,91376621,91375511,91374922,91374114,91373684,91368724	91383359,91378775,91376768,91375613,91375178,91374276,91373838,91371456	Gene ID= ENSG00000113369.8 TPM= 55.02 Transcript Type= protein_coding
chr5	93583337	93594615	93583337	93594615	+	ENST00000327111.7@NR2F1	ENST00000327111.7	protein_coding	93583337,93587917,93593562	93585486,93588444,93594615	Gene ID= ENSG00000175745.11 TPM= 2.9 Transcript Type= protein_coding
chr5	93618071	93621538	93618071	93621538	-	transcript1777.chr5.nnic@FAM172A	transcript1777.chr5.nnic	protein_coding	93621366,93618071	93621538,93621129	Gene ID= ENSG00000113391.18 TPM= 1.93 Transcript Type= NA
chr5	94618347	94697621	94618347	94697621	+	ENST00000265140.9@SLF1	ENST00000265140.9	protein_coding	94618347,94628811,94629092,94630503,94643273,94649454,94651702,94653272,94654630,94662298,94663750,94665861,94670151,94670843,94678808,94686573,94688506,94689473,94691564,94692074,94694831	94618765,94628924,94629167,94630743,94643435,94649597,94651845,94653421,94654752,94662351,94663908,94666024,94670279,94671008,94678955,94686718,94688669,94689606,94691656,94692256,94697621	Gene ID= ENSG00000133302.12 TPM= 1.93 Transcript Type= protein_coding
chr5	95463895	95555007	95463895	95555007	-	ENST00000358746.6@TTC37	ENST00000358746.6	protein_coding	95554936,95550581,95548560,95547061,95543184,95541815,95541305,95540690,95537043,95536817,95530089,95529001,95528013,95525587,95525398,95524465,95523655,95523202,95522054,95520716,95517146,95516916,95516672,95516525,95516353,95514855,95513571,95512477,95509594,95506934,95503814,95502880,95498370,95497416,95494964,95494682,95490908,95484724,95482473,95478290,95469780,95467866,95463895	95555007,95550650,95548715,95547151,95543327,95541906,95541380,95540830,95537141,95536925,95530229,95529102,95528152,95525673,95525501,95524591,95523834,95523326,95522307,95520818,95517322,95517060,95516750,95516586,95516409,95514923,95513645,95512618,95509687,95507011,95503938,95503003,95498591,95497488,95495017,95494793,95491036,95484845,95482631,95478442,95469910,95467989,95464681	Gene ID= ENSG00000198677.10 TPM= 29.92 Transcript Type= protein_coding
chr5	95555167	95557057	95555167	95557057	+	ENST00000504763.1@ARSK	ENST00000504763.1	protein_coding	95555167,95556208	95555404,95557057	Gene ID= ENSG00000164291.16 TPM= 1.93 Transcript Type= protein_coding
chr5	95620078	95622142	95620078	95622142	+	ENST00000380007.2@GPR150	ENST00000380007.2	protein_coding	95620078	95622142	Gene ID= ENSG00000178015.4 TPM= 1.93 Transcript Type= protein_coding
chr5	95731206	95795118	95731206	95795118	+	transcript1800.chr5.nnic@RHOBTB3	transcript1800.chr5.nnic	protein_coding	95731206,95731859,95736889,95748333,95752239,95763508,95768046,95780252,95783797,95788762,95793059	95731684,95732084,95737075,95748487,95752350,95763620,95768166,95780425,95783963,95788858,95795118	Gene ID= ENSG00000164292.12 TPM= 1.93 Transcript Type= NA
chr5	95731175	95796367	95731175	95796367	+	ENST00000379982.7@RHOBTB3	ENST00000379982.7	protein_coding	95731175,95731859,95736889,95748333,95752239,95755396,95763508,95768046,95780252,95783797,95788762,95793059	95731684,95732084,95737075,95748487,95752350,95755761,95763620,95768166,95780425,95783963,95788858,95796367	Gene ID= ENSG00000164292.12 TPM= 6.76 Transcript Type= protein_coding
chr5	95813849	95823005	95813849	95823005	-	ENST00000237858.10@GLRX	ENST00000237858.10	protein_coding	95822456,95816507,95813849	95823005,95816626,95814389	Gene ID= ENSG00000173221.13 TPM= 60.17 Transcript Type= protein_coding
chr5	95813971	95822714	95813971	95822714	-	ENST00000379979.8@GLRX	ENST00000379979.8	protein_coding	95822456,95816507,95813971	95822714,95816626,95814957	Gene ID= ENSG00000173221.13 TPM= 10.62 Transcript Type= protein_coding
chr5	95819186	95820373	95819186	95820373	+	transcript1827.chr5.nnic@NA	transcript1827.chr5.nnic	NA	95819186	95820373	Gene ID= novel_gene_chr5_1828 TPM= 13.51 Transcript Type= NA
chr5	95834781	95836288	95834781	95836288	+	transcript1834.chr5.nnic@NA	transcript1834.chr5.nnic	NA	95834781	95836288	Gene ID= novel_gene_chr5_1835 TPM= 2.9 Transcript Type= NA
chr5	95838245	95860133	95838245	95860133	+	transcript1838.chr5.nnic@LINC01554	transcript1838.chr5.nnic	lincRNA	95838245,95852366,95852792,95856878,95858804	95838443,95852714,95852926,95856981,95860133	Gene ID= ENSG00000236882.7 TPM= 4.18 Transcript Type= NA
chr5	95837982	95860133	95837982	95860133	+	transcript1845.chr5.nnic@LINC01554	transcript1845.chr5.nnic	lincRNA	95837982,95856878,95858804	95838443,95856981,95860133	Gene ID= ENSG00000236882.7 TPM= 20.59 Transcript Type= NA
chr5	95844025	95860133	95844025	95860133	+	transcript1847.chr5.nnic@LINC01554	transcript1847.chr5.nnic	lincRNA	95844025,95856878,95858804	95844635,95856981,95860133	Gene ID= ENSG00000236882.7 TPM= 3.21 Transcript Type= NA
chr5	95838245	95849831	95838245	95849831	+	transcript1846.chr5.nnic@AC008592.5	transcript1846.chr5.nnic	lincRNA	95838245,95843180,95848841	95838443,95843357,95849831	Gene ID= ENSG00000272021.1 TPM= 1.93 Transcript Type= NA
chr5	95846140	95848931	95846140	95848931	+	transcript1856.chr5.nnic@NA	transcript1856.chr5.nnic	NA	95846140	95848931	Gene ID= novel_gene_chr5_1857 TPM= 1.93 Transcript Type= NA
chr5	95850077	95852304	95850077	95852304	-	transcript1858.chr5.nnic@NA	transcript1858.chr5.nnic	NA	95850077	95852304	Gene ID= novel_gene_chr5_1859 TPM= 5.79 Transcript Type= NA
chr5	95885098	95962071	95885098	95962071	-	ENST00000237853.8@ELL2	ENST00000237853.8	protein_coding	95961575,95943002,95919424,95913771,95906523,95900956,95900693,95898240,95895628,95891103,95889086,95885098	95962071,95943049,95919545,95913934,95906782,95901080,95900780,95898810,95895691,95891274,95889130,95888987	Gene ID= ENSG00000118985.15 TPM= 7.72 Transcript Type= protein_coding
chr5	96702801	96774683	96702801	96774683	+	ENST00000309190.9@CAST	ENST00000309190.9	protein_coding	96702801,96722639,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96702915,96722698,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774683	Gene ID= ENSG00000153113.23 TPM= 17.52 Transcript Type= protein_coding
chr5	96702789	96774679	96702789	96774679	+	ENST00000395813.5@CAST	ENST00000395813.5	protein_coding	96702789,96722639,96726794,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96702915,96722698,96726859,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774679	Gene ID= ENSG00000153113.23 TPM= 7.7 Transcript Type= protein_coding
chr5	96702806	96772786	96702806	96772786	+	ENST00000511782.5@CAST	ENST00000511782.5	protein_coding	96702806,96722639,96726794,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96702915,96722718,96726859,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96772786	Gene ID= ENSG00000153113.23 TPM= 5.82 Transcript Type= protein_coding
chr5	96731475	96733702	96731475	96733702	-	transcript1982.chr5.nnic@NA	transcript1982.chr5.nnic	NA	96731475	96733702	Gene ID= novel_gene_chr5_1983 TPM= 7.72 Transcript Type= NA
chr5	96773908	96776907	96773908	96776907	+	transcript1980.chr5.nnic@NA	transcript1980.chr5.nnic	NA	96773908	96776907	Gene ID= novel_gene_chr5_1981 TPM= 4.83 Transcript Type= NA
chr5	96875939	96919716	96875939	96919716	+	ENST00000437043.7@ERAP2	ENST00000437043.7	protein_coding	96875939,96879564,96883792,96886655,96889185,96892299,96895246,96896373,96896732,96900121,96901506,96902274,96903377,96908961,96909580,96912637,96913317,96915688,96917462	96876527,96880260,96883930,96886789,96889305,96892453,96895359,96896504,96896863,96900189,96901681,96902353,96903560,96909117,96909764,96912798,96913457,96915769,96919716	Gene ID= ENSG00000164308.16 TPM= 1.93 Transcript Type= protein_coding
chr5	96934093	96935847	96934093	96935847	-	transcript1994.chr5.nnic@NA	transcript1994.chr5.nnic	NA	96934093	96935847	Gene ID= novel_gene_chr5_1995 TPM= 1.93 Transcript Type= NA
chr5	96935464	97037515	96935464	97037515	+	ENST00000231368.9@LNPEP	ENST00000231368.9	protein_coding	96935464,96979138,96985080,96986539,96993015,96993817,96996390,96998014,97003415,97006073,97006427,97013648,97014939,97022300,97024521,97026617,97027733,97028402	96936174,96979978,96985218,96986670,96993135,96993971,96996503,96998145,97003546,97006233,97006515,97013831,97015095,97022484,97024682,97026757,97027814,97037515	Gene ID= ENSG00000113441.15 TPM= 4.83 Transcript Type= protein_coding
chr5	96936083	97007658	96936083	97007658	+	transcript1993.chr5.nic@LNPEP	transcript1993.chr5.nic	protein_coding	96936083,96979138,96985080,96986539,96993015,96993817,96996390,96998014,97003415,97006073,97006427	96936174,96979978,96985218,96986670,96993135,96993971,96996503,96998145,97003546,97006233,97007658	Gene ID= ENSG00000113441.15 TPM= 3.86 Transcript Type= NA
chr5	97160867	97183260	97160867	97183260	-	ENST00000283109.7@RIOK2	ENST00000283109.7	protein_coding	97183126,97179055,97177732,97177116,97173175,97171206,97168760,97167467,97165051,97160867	97183260,97179193,97177848,97177291,97173263,97171397,97168852,97167991,97165147,97163225	Gene ID= ENSG00000058729.10 TPM= 8.69 Transcript Type= protein_coding
chr5	98773635	98794055	98773635	98794055	+	ENST00000513185.1@RGMB	ENST00000513185.1	protein_coding	98773635,98779580,98793085	98774206,98780088,98794055	Gene ID= ENSG00000174136.11 TPM= 3.86 Transcript Type= protein_coding
chr5	98769619	98774433	98769619	98774433	-	transcript2003.chr5.nnic@RGMB-AS1	transcript2003.chr5.nnic	antisense_RNA	98774348,98773308,98769619	98774433,98773946,98771184	Gene ID= ENSG00000246763.6 TPM= 1.93 Transcript Type= NA
chr5	98879618	98929007	98879618	98929007	-	transcript2014.chr5.nic@CHD1	transcript2014.chr5.nic	protein_coding	98928539,98926334,98904897,98903792,98902900,98901186,98900811,98899480,98898664,98898256,98897193,98896226,98894597,98893416,98892525,98889076,98888088,98885578,98883088,98881975,98881279,98881076,98879618	98929007,98926534,98905098,98903908,98902964,98901335,98901082,98899705,98898764,98898434,98897320,98896442,98894686,98893606,98892713,98889238,98888240,98885649,98883237,98882123,98881375,98881171,98879728	Gene ID= ENSG00000153922.10 TPM= 11.58 Transcript Type= NA
chr5	100535305	100586741	100535305	100586741	+	ENST00000312637.4@FAM174A	ENST00000312637.4	protein_coding	100535305,100562054,100586181	100535964,100562188,100586741	Gene ID= ENSG00000174132.8 TPM= 40.54 Transcript Type= protein_coding
chr5	100560221	100563410	100560221	100563410	+	transcript2031.chr5.nnic@NA	transcript2031.chr5.nnic	NA	100560221	100563410	Gene ID= novel_gene_chr5_2032 TPM= 1.93 Transcript Type= NA
chr5	102755162	103029713	102755162	103029713	+	transcript2038.chr5.nic@PAM	transcript2038.chr5.nic	protein_coding	102755162,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028182,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 18.59 Transcript Type= NA
chr5	102755175	103029730	102755175	103029730	+	transcript2045.chr5.nic@PAM	transcript2045.chr5.nic	protein_coding	102755175,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103029730	Gene ID= ENSG00000145730.20 TPM= 7.01 Transcript Type= NA
chr5	102755158	103029713	102755158	103029713	+	transcript2046.chr5.nic@PAM	transcript2046.chr5.nic	protein_coding	102755158,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103028182,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 9.74 Transcript Type= NA
chr5	102755265	103029713	102755265	103029713	+	transcript2051.chr5.nic@PAM	transcript2051.chr5.nic	protein_coding	102755265,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028182,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 3.95 Transcript Type= NA
chr5	102755267	103029713	102755267	103029713	+	transcript2055.chr5.nnic@PAM	transcript2055.chr5.nnic	protein_coding	102755267,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028185,103028887	102755348,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 7.97 Transcript Type= NA
chr5	102755263	103029713	102755263	103029713	+	transcript2063.chr5.nnic@PAM	transcript2063.chr5.nnic	protein_coding	102755263,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103028185,103028887	102755348,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 2.98 Transcript Type= NA
chr5	102865823	103029713	102865823	103029713	+	ENST00000348126.6@PAM	ENST00000348126.6	protein_coding	102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028185,103028887	102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 5.88 Transcript Type= protein_coding
chr5	103086333	103120151	103086333	103120151	-	ENST00000399004.6@GIN1	ENST00000399004.6	protein_coding	103120064,103108569,103106716,103104541,103097590,103097314,103096541,103086333	103120151,103108714,103106909,103104846,103097781,103097490,103096826,103088172	Gene ID= ENSG00000145723.16 TPM= 1.93 Transcript Type= protein_coding
chr5	103548855	103562793	103548855	103562793	-	ENST00000230792.6@NUDT12	ENST00000230792.6	protein_coding	103562703,103560043,103558879,103555931,103554740,103552217,103548855	103562793,103560254,103559468,103556098,103554853,103552416,103550971	Gene ID= ENSG00000112874.9 TPM= 10.62 Transcript Type= protein_coding
chr5	108199254	108382097	108199254	108382097	-	transcript2096.chr5.nnic@FBXL17	transcript2096.chr5.nnic	protein_coding	108380699,108367831,108364738,108348399,108224117,108199254	108382097,108367953,108364995,108348530,108224228,108200162	Gene ID= ENSG00000145743.15 TPM= 2.9 Transcript Type= NA
chr5	108297735	108382097	108297735	108382097	-	transcript2097.chr5.nnic@FBXL17	transcript2097.chr5.nnic	protein_coding	108380699,108367831,108364738,108348399,108301976,108297735	108382097,108367953,108364995,108348530,108302060,108299837	Gene ID= ENSG00000145743.15 TPM= 4.83 Transcript Type= NA
chr5	108727825	108728260	108727825	108728260	-	ENST00000606054.1@LINC01023	ENST00000606054.1	lincRNA	108727825	108728260	Gene ID= ENSG00000272523.1 TPM= 5.79 Transcript Type= lincRNA
chr5	109378315	109409917	109378315	109409917	-	transcript2108.chr5.nic@PJA2	transcript2108.chr5.nic	protein_coding	109409842,109383403,109381503,109378315	109409917,109383520,109381703,109379254	Gene ID= ENSG00000198961.9 TPM= 2.9 Transcript Type= NA
chr5	109334709	109409994	109334709	109409994	-	ENST00000361189.6@PJA2	ENST00000361189.6	protein_coding	109409842,109383403,109381503,109378204,109368561,109362840,109355915,109344705,109344190,109334709	109409994,109383520,109381703,109379254,109368746,109363022,109356026,109344819,109344311,109337356	Gene ID= ENSG00000198961.9 TPM= 71.43 Transcript Type= protein_coding
chr5	109687800	109691053	109687800	109691053	-	transcript2114.chr5.nnic@NA	transcript2114.chr5.nnic	NA	109687800	109691053	Gene ID= novel_gene_chr5_2115 TPM= 6.76 Transcript Type= NA
chr5	109689438	109867178	109689438	109867178	+	transcript2110.chr5.nnic@MAN2A1	transcript2110.chr5.nnic	protein_coding	109689438,109713520,109716120,109729342,109755329,109767535,109770355,109774788,109781396,109784744,109788934,109789460,109804154,109817273,109819669,109820220,109823723,109842328,109845865,109847657,109855140,109865036,109866846	109690552,109713774,109716264,109729513,109755456,109767708,109770541,109774965,109781598,109784926,109789048,109789527,109804277,109817438,109819887,109820342,109823837,109842461,109846006,109847790,109855334,109865146,109867178	Gene ID= ENSG00000112893.9 TPM= 1.93 Transcript Type= NA
chr5	109689366	109867178	109689366	109867178	+	ENST00000261483.4@MAN2A1	ENST00000261483.4	protein_coding	109689366,109713520,109716120,109729342,109755329,109767535,109770355,109774788,109781396,109784744,109788934,109789460,109817273,109819669,109820220,109823723,109842328,109845865,109847657,109855140,109865036,109866846	109690552,109713774,109716264,109729513,109755456,109767708,109770541,109774965,109781598,109784926,109789048,109789527,109817438,109819887,109820342,109823837,109842461,109846006,109847790,109855334,109865146,109867178	Gene ID= ENSG00000112893.9 TPM= 5.79 Transcript Type= protein_coding
chr5	110738994	110762784	110738994	110762784	+	ENST00000355943.7@SLC25A46	ENST00000355943.7	protein_coding	110738994,110742047,110743730,110746269,110748163,110755465,110756702,110761204	110739402,110742089,110743787,110746346,110748263,110755521,110756759,110762784	Gene ID= ENSG00000164209.16 TPM= 36.68 Transcript Type= protein_coding
chr5	111073314	111078024	111073314	111078024	+	ENST00000379706.4@TSLP	ENST00000379706.4	protein_coding	111073314,111075946	111073645,111078024	Gene ID= ENSG00000145777.14 TPM= 1.93 Transcript Type= protein_coding
chr5	111092303	111121141	111092303	111121141	+	transcript2129.chr5.nic@WDR36	transcript2129.chr5.nic	protein_coding	111092303,111094920,111097079,111098722,111100589,111102345,111103786,111104177,111104697,111105295,111106057,111107294,111110189,111110788,111111170,111113074,111119013,111120496,111120996	111092618,111094947,111097179,111098839,111100721,111102399,111103918,111104352,111104817,111105360,111106143,111107439,111110303,111110953,111111278,111113153,111119120,111120593,111121141	Gene ID= ENSG00000134987.11 TPM= 1.93 Transcript Type= NA
chr5	111092314	111127192	111092314	111127192	+	ENST00000513710.3@WDR36	ENST00000513710.3	protein_coding	111092314,111094920,111097079,111098722,111100589,111102345,111103786,111104177,111104697,111105295,111106057,111107294,111110189,111110788,111111170,111113074,111119013,111120496,111120996,111123805,111124108,111125608,111126734	111092618,111094947,111097179,111098839,111100721,111102399,111103918,111104352,111104817,111105360,111106143,111107439,111110303,111110953,111111278,111113153,111119120,111120593,111121141,111123924,111124189,111125795,111127192	Gene ID= ENSG00000134987.11 TPM= 2.9 Transcript Type= protein_coding
chr5	111728812	111757724	111728812	111757724	-	ENST00000379671.7@NREP	ENST00000379671.7	protein_coding	111757562,111757136,111755770,111735430,111728812	111757724,111757179,111755830,111735507,111731046	Gene ID= ENSG00000134986.13 TPM= 1.93 Transcript Type= protein_coding
chr5	112160526	112164276	112160526	112164276	+	ENST00000413221.6@EPB41L4A-AS1	ENST00000413221.6	lincRNA	112160526,112161703,112162151	112161295,112161775,112164276	Gene ID= ENSG00000224032.6 TPM= 19.31 Transcript Type= lincRNA
chr5	112842028	112845151	112842028	112845151	+	transcript2158.chr5.nnic@NA	transcript2158.chr5.nnic	NA	112842028	112845151	Gene ID= novel_gene_chr5_2159 TPM= 4.83 Transcript Type= NA
chr5	112861276	112893117	112861276	112893117	+	transcript2155.chr5.nic@AC008575.2	transcript2155.chr5.nic	protein_coding	112861276,112862508,112864457,112891603	112861417,112862583,112864528,112893117	Gene ID= ENSG00000272869.5 TPM= 5.79 Transcript Type= NA
chr5	112861305	112893079	112861305	112893079	+	ENST00000512790.5@AC008575.2	ENST00000512790.5	protein_coding	112861305,112862508,112864457,112864621,112891603	112861417,112862583,112864528,112864732,112893079	Gene ID= ENSG00000272869.5 TPM= 5.79 Transcript Type= processed_transcript
chr5	112861222	112869788	112861222	112869788	+	ENST00000505459.5@SRP19	ENST00000505459.5	protein_coding	112861222,112862508,112864457,112864621,112867404	112861417,112862583,112864528,112864732,112869788	Gene ID= ENSG00000153037.13 TPM= 7.72 Transcript Type= protein_coding
chr5	112861305	112867935	112861305	112867935	+	ENST00000282999.7@SRP19	ENST00000282999.7	protein_coding	112861305,112862508,112864457,112864621,112867372	112861417,112862583,112864528,112864732,112867935	Gene ID= ENSG00000153037.13 TPM= 15.44 Transcript Type= protein_coding
chr5	112876379	112922539	112876379	112922539	-	ENST00000379638.8@REEP5	ENST00000379638.8	protein_coding	112922073,112921163,112902380,112887015,112876379	112922539,112921256,112902518,112887183,112878835	Gene ID= ENSG00000129625.12 TPM= 177.62 Transcript Type= protein_coding
chr5	112921674	112922850	112921674	112922850	+	transcript2160.chr5.nnic@NA	transcript2160.chr5.nnic	NA	112921674	112922850	Gene ID= novel_gene_chr5_2161 TPM= 1.93 Transcript Type= NA
chr5	112976702	113020123	112976702	113020123	+	ENST00000515408.5@DCP2	ENST00000515408.5	protein_coding	112976702,112985835,112992121,112992672,113001084,113001357,113001567,113003942,113010756,113013321	112976986,112985986,112992248,112992770,113001236,113001469,113001674,113004077,113010807,113020123	Gene ID= ENSG00000172795.15 TPM= 2.9 Transcript Type= protein_coding
chr5	112976736	113020970	112976736	113020970	+	ENST00000389063.2@DCP2	ENST00000389063.2	protein_coding	112976736,112985835,112992121,112992672,113001084,113001357,113001567,113003942,113007938,113010756,113013321	112976986,112985986,112992248,112992770,113001236,113001469,113001674,113004077,113008042,113010807,113020970	Gene ID= ENSG00000172795.15 TPM= 8.69 Transcript Type= protein_coding
chr5	113513683	113595284	113513683	113595284	+	ENST00000161863.8@YTHDC2	ENST00000161863.8	protein_coding	113513683,113515272,113524981,113526586,113532879,113534305,113535642,113539074,113540968,113542368,113548541,113548955,113553181,113553590,113553767,113553942,113556052,113561080,113563373,113563859,113565893,113567092,113567654,113579586,113581417,113584302,113591041,113591996,113593303,113593482	113514082,113515362,113525177,113526785,113533045,113534407,113535798,113539181,113541116,113542503,113548667,113549020,113553359,113553686,113553854,113554022,113556134,113561185,113563492,113564131,113566019,113567297,113567849,113579695,113581709,113584479,113591244,113592178,113593390,113595284	Gene ID= ENSG00000047188.15 TPM= 9.65 Transcript Type= protein_coding
chr5	114360945	114496500	114360945	114496500	+	ENST00000512097.7@KCNN2	ENST00000512097.7	protein_coding	114360945,114361964,114363906,114404438,114463049,114473054,114487050,114493403,114495895	114361150,114363261,114364001,114404856,114463190,114473164,114487177,114493472,114496500	Gene ID= ENSG00000080709.14 TPM= 1.93 Transcript Type= protein_coding
chr5	115520908	115544894	115520908	115544894	-	ENST00000274457.4@FEM1C	ENST00000274457.4	protein_coding	115544523,115542950,115520908	115544894,115543683,115525617	Gene ID= ENSG00000145780.7 TPM= 20.27 Transcript Type= protein_coding
chr5	115578650	115602479	115578650	115602479	-	ENST00000427199.2@TICAM2	ENST00000427199.2	protein_coding	115602097,115578650	115602479,115581315	Gene ID= ENSG00000243414.5 TPM= 4.83 Transcript Type= protein_coding
chr5	115602144	115620254	115602144	115620254	+	transcript2213.chr5.nnic@AC010226.1	transcript2213.chr5.nnic	antisense_RNA	115602144,115620068	115602460,115620254	Gene ID= ENSG00000249249.1 TPM= 2.9 Transcript Type= NA
chr5	115613508	115626173	115613508	115626173	-	ENST00000456936.3@TMED7	ENST00000456936.3	protein_coding	115625601,115620435,115613508	115626173,115620680,115616445	Gene ID= ENSG00000134970.13 TPM= 71.43 Transcript Type= protein_coding
chr5	115830673	115841565	115830673	115841565	-	ENST00000500945.2@ATG12	ENST00000500945.2	protein_coding	115841390,115832602,115830673	115841565,115832664,115831863	Gene ID= ENSG00000145782.12 TPM= 1.93 Transcript Type= protein_coding
chr5	115829232	115830319	115829232	115830319	-	transcript2236.chr5.nnic@NA	transcript2236.chr5.nnic	NA	115829232	115830319	Gene ID= novel_gene_chr5_2237 TPM= 1.93 Transcript Type= NA
chr5	115841933	115913984	115841933	115913984	+	transcript2218.chr5.nnic@AP3S1	transcript2218.chr5.nnic	protein_coding	115841933,115866670,115870017,115895087,115902885,115906821,115913362	115842106,115866761,115870128,115895158,115902992,115906861,115913984	Gene ID= ENSG00000177879.15 TPM= 3.86 Transcript Type= NA
chr5	115841481	115914081	115841481	115914081	+	ENST00000316788.11@AP3S1	ENST00000316788.11	protein_coding	115841481,115866670,115870017,115895087,115902885,115913362	115842106,115866761,115870128,115895158,115902992,115914081	Gene ID= ENSG00000177879.15 TPM= 27.03 Transcript Type= protein_coding
chr5	116051917	116052289	116051917	116052289	-	ENST00000469891.2@AC034236.1	ENST00000469891.2	processed_pseudogene	116051917	116052289	Gene ID= ENSG00000185641.6 TPM= 1.93 Transcript Type= processed_pseudogene
chr5	116083807	116085416	116083807	116085416	-	ENST00000606662.1@AC034236.2	ENST00000606662.1	antisense_RNA	116083807	116085416	Gene ID= ENSG00000271918.1 TPM= 3.86 Transcript Type= antisense_RNA
chr5	116085026	116293286	116085026	116293286	+	ENST00000632434.1@COMMD10	ENST00000632434.1	protein_coding	116085026,116087497,116091079,116092545,116134068,116291517,116292451	116085093,116087587,116091189,116092700,116134178,116291576,116293286	Gene ID= ENSG00000145781.8 TPM= 17.38 Transcript Type= protein_coding
chr5	118839699	118988547	118839699	118988547	-	transcript2256.chr5.nnic@DTWD2	transcript2256.chr5.nnic	protein_coding	118988294,118944559,118939196,118926979,118848090,118839699	118988547,118944649,118939290,118928729,118848218,118841087	Gene ID= ENSG00000169570.9 TPM= 1.93 Transcript Type= NA
chr5	119071058	119135833	119071058	119135833	+	transcript2258.chr5.nic@DMXL1	transcript2258.chr5.nic	protein_coding	119071058,119097979,119101935,119105180,119110151,119114475,119116158,119118815,119120971,119129211,119133132,119133494	119071656,119098104,119102006,119105258,119110283,119114541,119116336,119119004,119121139,119129423,119133385,119135833	Gene ID= ENSG00000172869.14 TPM= 4.83 Transcript Type= NA
chr5	119354773	119394598	119354773	119394598	+	ENST00000503646.1@TNFAIP8	ENST00000503646.1	protein_coding	119354773,119356023,119392816	119355392,119356121,119394598	Gene ID= ENSG00000145779.7 TPM= 1.93 Transcript Type= protein_coding
chr5	119452443	119542333	119452443	119542333	+	ENST00000256216.10@HSD17B4	ENST00000256216.10	protein_coding	119452443,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452633,119456368,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542333	Gene ID= ENSG00000133835.14 TPM= 60.33 Transcript Type= protein_coding
chr5	119452525	119542332	119452525	119542332	+	transcript2278.chr5.nic@HSD17B4	transcript2278.chr5.nic	protein_coding	119452525,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452821,119456368,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542332	Gene ID= ENSG00000133835.14 TPM= 4.34 Transcript Type= NA
chr5	119452538	119542269	119452538	119542269	+	ENST00000510025.5@HSD17B4	ENST00000510025.5	protein_coding	119452538,119456315,119471636,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452633,119456368,119471700,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542269	Gene ID= ENSG00000133835.14 TPM= 1.93 Transcript Type= protein_coding
chr5	119452570	119542264	119452570	119542264	+	ENST00000504811.5@HSD17B4	ENST00000504811.5	protein_coding	119452570,119456315,119471636,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452821,119456368,119471700,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542264	Gene ID= ENSG00000133835.14 TPM= 1.93 Transcript Type= protein_coding
chr5	121961961	122028619	121961961	122028619	+	ENST00000339397.4@SRFBP1	ENST00000339397.4	protein_coding	121961961,121974196,121975315,121994599,122019260,122020088,122022370,122026942	121962068,121974284,121975387,121994670,122019341,122020802,122022407,122028619	Gene ID= ENSG00000151304.5 TPM= 5.79 Transcript Type= protein_coding
chr5	122035030	122036874	122035030	122036874	+	transcript2289.chr5.nnic@NA	transcript2289.chr5.nnic	NA	122035030	122036874	Gene ID= novel_gene_chr5_2290 TPM= 1.93 Transcript Type= NA
chr5	122774996	122830108	122774996	122830108	+	ENST00000379516.6@SNX2	ENST00000379516.6	protein_coding	122774996,122795266,122799692,122801869,122802081,122803472,122808277,122815896,122816915,122817280,122818818,122826050,122827379,122827575,122829598	122775211,122795383,122799855,122801935,122802124,122803613,122808355,122815971,122817028,122817373,122819023,122826193,122827459,122827646,122830108	Gene ID= ENSG00000205302.6 TPM= 36.68 Transcript Type= protein_coding
chr5	122845408	123012701	122845408	123012701	+	transcript2305.chr5.nnic@SNX24	transcript2305.chr5.nnic	protein_coding	122845408,122936734,122946055,122999912,123001405,123001940,123011002	122845693,122936817,122946159,123000006,123001437,123002004,123012701	Gene ID= ENSG00000064652.10 TPM= 1.93 Transcript Type= NA
chr5	122845449	123009212	122845449	123009212	+	ENST00000261369.8@SNX24	ENST00000261369.8	protein_coding	122845449,122936734,122946055,122999912,123001405,123001940,123007682	122845693,122936817,122946159,123000006,123001437,123002004,123009212	Gene ID= ENSG00000064652.10 TPM= 5.79 Transcript Type= protein_coding
chr5	123344885	123423303	123344885	123423303	-	ENST00000306467.9@CEP120	ENST00000306467.9	protein_coding	123422950,123418359,123416010,123412399,123399136,123393300,123391110,123389924,123388432,123386518,123384951,123382986,123382737,123382111,123378336,123377374,123372650,123364496,123349944,123344885	123423303,123418515,123416124,123412540,123399284,123393497,123391337,123390140,123388606,123386667,123385133,123383082,123382889,123382200,123378428,123377535,123372772,123364594,123350089,123346753	Gene ID= ENSG00000168944.15 TPM= 2.9 Transcript Type= protein_coding
chr5	123512213	123616771	123512213	123616771	+	transcript2323.chr5.nic@CSNK1G3	transcript2323.chr5.nic	protein_coding	123512213,123545417,123553107,123557495,123573393,123575729,123588068,123588427,123590410,123591319,123595039,123604724,123605339,123614342	123512570,123545841,123553147,123557564,123573541,123575963,123588153,123588511,123590558,123591414,123595134,123604830,123605362,123616771	Gene ID= ENSG00000151292.17 TPM= 4.83 Transcript Type= NA
chr5	123512099	123617040	123512099	123617040	+	ENST00000345990.8@CSNK1G3	ENST00000345990.8	protein_coding	123512099,123545417,123553107,123557495,123573393,123575729,123588068,123588427,123590413,123591319,123604724,123605339,123614342	123512570,123545841,123553147,123557564,123573541,123575963,123588153,123588511,123590558,123591414,123604830,123605362,123617040	Gene ID= ENSG00000151292.17 TPM= 1.93 Transcript Type= protein_coding
chr5	124636916	124746784	124636916	124746784	-	transcript2331.chr5.nic@ZNF608	transcript2331.chr5.nic	protein_coding	124746195,124744084,124701014,124649610,124643511,124641252,124639133,124636916	124746784,124745172,124701269,124649697,124643683,124641405,124639214,124637906	Gene ID= ENSG00000168916.15 TPM= 1.93 Transcript Type= NA
chr5	124636916	124744521	124636916	124744521	-	ENST00000504926.5@ZNF608	ENST00000504926.5	protein_coding	124744413,124701014,124649610,124646679,124644244,124643511,124641252,124639133,124636916	124744521,124701269,124649697,124649133,124644661,124643683,124641405,124639214,124637906	Gene ID= ENSG00000168916.15 TPM= 2.9 Transcript Type= protein_coding
chr5	126423146	126494371	126423146	126494371	+	ENST00000285689.7@GRAMD2B	ENST00000285689.7	protein_coding	126423146,126465426,126469677,126472238,126473265,126477692,126480456,126480627,126483463,126484402,126485686,126486873,126488799,126492915	126423689,126465545,126469788,126472304,126473368,126477787,126480527,126480707,126483574,126484524,126485773,126486977,126488892,126494371	Gene ID= ENSG00000155324.9 TPM= 2.9 Transcript Type= protein_coding
chr5	126541841	126595418	126541841	126595418	-	ENST00000409134.7@ALDH7A1	ENST00000409134.7	protein_coding	126595007,126593351,126592664,126583932,126582851,126577079,126575420,126570782,126568259,126561083,126559240,126555931,126554287,126552021,126550196,126549929,126546324,126541841	126595418,126593404,126592729,126584012,126582974,126577211,126575464,126570859,126568356,126561124,126559334,126556015,126554393,126552137,126550293,126550002,126546399,126545019	Gene ID= ENSG00000164904.17 TPM= 1.93 Transcript Type= protein_coding
chr5	126600922	126626239	126600922	126626239	+	transcript2342.chr5.nnic@PHAX	transcript2342.chr5.nnic	protein_coding	126600922,126603570,126608364,126617250,126624575,126625747	126601058,126604183,126608484,126617333,126625543,126626239	Gene ID= ENSG00000164902.13 TPM= 1.93 Transcript Type= NA
chr5	126600268	126627252	126600268	126627252	+	ENST00000297540.4@PHAX	ENST00000297540.4	protein_coding	126600268,126603570,126608364,126617250,126624575	126601058,126604183,126608484,126617333,126627252	Gene ID= ENSG00000164902.13 TPM= 2.9 Transcript Type= protein_coding
chr5	127517609	127555089	127517609	127555089	+	ENST00000296666.12@PRRC1	ENST00000296666.12	protein_coding	127517609,127523460,127524531,127526618,127530294,127533623,127539040,127547819,127551707	127517776,127523582,127524920,127526778,127530396,127533786,127539143,127547921,127555089	Gene ID= ENSG00000164244.20 TPM= 13.51 Transcript Type= protein_coding
chr5	127825929	128083027	127825929	128083027	-	transcript2372.chr5.nnic@LINC01184	transcript2372.chr5.nnic	lincRNA	128082970,128061144,127956804,127825929	128083027,128061244,127956921,127827418	Gene ID= ENSG00000245937.7 TPM= 1.93 Transcript Type= NA
chr5	127965888	128083108	127965888	128083108	-	transcript2377.chr5.nic@LINC01184	transcript2377.chr5.nic	lincRNA	128082735,128061144,127965888	128083108,128061244,127966928	Gene ID= ENSG00000245937.7 TPM= 1.93 Transcript Type= NA
chr5	129094751	129114028	129094751	129114028	+	ENST00000173527.5@ISOC1	ENST00000173527.5	protein_coding	129094751,129104956,129105185,129106946,129112855	129095075,129105075,129105388,129107062,129114028	Gene ID= ENSG00000066583.11 TPM= 27.03 Transcript Type= protein_coding
chr5	129904546	130002795	129904546	130002795	+	transcript2386.chr5.nnic@CHSY3	transcript2386.chr5.nnic	protein_coding	129904546,129908077,130001400	129905631,129908360,130002795	Gene ID= ENSG00000198108.3 TPM= 2.9 Transcript Type= NA
chr5	131159335	131165333	131159335	131165333	-	ENST00000513345.5@HINT1	ENST00000513345.5	protein_coding	131165060,131162572,131159335	131165333,131162676,131159611	Gene ID= ENSG00000169567.11 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr5	131159027	131165485	131159027	131165485	-	ENST00000304043.9@HINT1	ENST00000304043.9	protein_coding	131165095,131162572,131159027	131165485,131162676,131159611	Gene ID= ENSG00000169567.11 TPM= 351.37 Transcript Type= protein_coding
chr5	131170810	131205426	131170810	131205426	+	ENST00000379380.8@LYRM7	ENST00000379380.8	protein_coding	131170810,131180095,131182229,131187028,131199531	131171038,131180167,131182299,131187109,131205426	Gene ID= ENSG00000186687.15 TPM= 2.9 Transcript Type= protein_coding
chr5	131264039	131394667	131264039	131394667	+	transcript2403.chr5.nnic@CDC42SE2	transcript2403.chr5.nnic	protein_coding	131264039,131315976,131359209,131385543,131390993,131391829	131264166,131316144,131359547,131385644,131391108,131394667	Gene ID= ENSG00000158985.13 TPM= 5.31 Transcript Type= NA
chr5	131264061	131394667	131264061	131394667	+	transcript2405.chr5.nnic@CDC42SE2	transcript2405.chr5.nnic	protein_coding	131264061,131359209,131385543,131390993,131391829	131264166,131359547,131385644,131391108,131394667	Gene ID= ENSG00000158985.13 TPM= 2.41 Transcript Type= NA
chr5	131264075	131394690	131264075	131394690	+	ENST00000360515.7@CDC42SE2	ENST00000360515.7	protein_coding	131264075,131315976,131359209,131385543,131390993,131391918	131264166,131316144,131359547,131385644,131391108,131394690	Gene ID= ENSG00000158985.13 TPM= 1.93 Transcript Type= protein_coding
chr5	131741329	131797027	131741329	131797027	-	transcript2419.chr5.nnic@AC008695.1	transcript2419.chr5.nnic	protein_coding	131796830,131744564,131741329	131797027,131744690,131742012	Gene ID= ENSG00000273217.1 TPM= 1.93 Transcript Type= NA
chr5	131641715	131797063	131641715	131797063	-	ENST00000615660.4@FNIP1	ENST00000615660.4	protein_coding	131796830,131744564,131730904,131719317,131718986,131716565,131710578,131709201,131706411,131704065,131698917,131679029,131677703,131672686,131671505,131670463,131651802,131647090,131641715	131797063,131744690,131731038,131719417,131719060,131716656,131710661,131709272,131706546,131704266,131699002,131679175,131677872,131672924,131672661,131670631,131651999,131647205,131644763	Gene ID= ENSG00000217128.11 TPM= 12.55 Transcript Type= protein_coding
chr5	131715589	131797027	131715589	131797027	-	transcript2417.chr5.nnic@FNIP1	transcript2417.chr5.nnic	protein_coding	131796830,131744564,131730904,131719317,131718986,131716565,131715589	131797027,131744690,131731038,131719417,131719060,131716656,131715993	Gene ID= ENSG00000217128.11 TPM= 10.62 Transcript Type= NA
chr5	131715593	131797027	131715593	131797027	-	transcript2418.chr5.nic@FNIP1	transcript2418.chr5.nic	protein_coding	131796830,131744564,131730904,131719317,131718986,131715593	131797027,131744690,131731038,131719417,131719060,131716656	Gene ID= ENSG00000217128.11 TPM= 4.83 Transcript Type= NA
chr5	131795608	131796980	131795608	131796980	-	ENST00000623690.1@FNIP1	ENST00000623690.1	protein_coding	131795608	131796980	Gene ID= ENSG00000217128.11 TPM= 3.86 Transcript Type= TEC
chr5	131677597	131797016	131677597	131797016	-	ENST00000511848.1@FNIP1	ENST00000511848.1	protein_coding	131796830,131744564,131730904,131719317,131718986,131716565,131710578,131709201,131706411,131704065,131698917,131679029,131677597	131797016,131744690,131731038,131719417,131719060,131716656,131710661,131709272,131706546,131704266,131699002,131679175,131677872	Gene ID= ENSG00000217128.11 TPM= 2.9 Transcript Type= protein_coding
chr5	132192613	132227864	132192613	132227864	-	transcript2426.chr5.nic@P4HA2	transcript2426.chr5.nic	protein_coding	132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192613	132227864,132227221,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 4.05 Transcript Type= NA
chr5	132192613	132227877	132192613	132227877	-	transcript2437.chr5.nic@P4HA2	transcript2437.chr5.nic	protein_coding	132227790,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198206,132195412,132194926,132192613	132227877,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198271,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 11.78 Transcript Type= NA
chr5	132192610	132228082	132192610	132228082	-	ENST00000360568.7@P4HA2	ENST00000360568.7	protein_coding	132227790,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610	132228082,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 7.92 Transcript Type= protein_coding
chr5	132192610	132227857	132192610	132227857	-	ENST00000166534.8@P4HA2	ENST00000166534.8	protein_coding	132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198206,132195412,132194926,132192610	132227857,132227221,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198271,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 2.12 Transcript Type= protein_coding
chr5	132192610	132227819	132192610	132227819	-	ENST00000379086.5@P4HA2	ENST00000379086.5	protein_coding	132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610	132227819,132227258,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 2.12 Transcript Type= protein_coding
chr5	132294443	132344206	132294443	132344206	+	ENST00000200652.3@SLC22A4	ENST00000200652.3	protein_coding	132294443,132312161,132313614,132322184,132327277,132331756,132334718,132335818,132340565,132343760	132295009,132312264,132313768,132322355,132327403,132331850,132334932,132336000,132340700,132344206	Gene ID= ENSG00000197208.5 TPM= 1.93 Transcript Type= protein_coding
chr5	132366049	132370408	132366049	132370408	-	transcript2485.chr5.nic@MIR3936HG	transcript2485.chr5.nic	processed_transcript	132369844,132366049	132370408,132366781	Gene ID= ENSG00000233006.6 TPM= 1.93 Transcript Type= NA
chr5	132353337	132356192	132353337	132356192	-	transcript2497.chr5.nnic@NA	transcript2497.chr5.nnic	NA	132353337	132356192	Gene ID= novel_gene_chr5_2498 TPM= 1.93 Transcript Type= NA
chr5	132369755	132395611	132369755	132395611	+	transcript2454.chr5.nnic@SLC22A5	transcript2454.chr5.nnic	protein_coding	132369755,132378106,132378378,132384147,132385328,132387025,132388921,132390690,132392433,132393676,132394185	132370365,132378235,132378481,132384301,132385499,132387151,132389021,132390904,132392615,132393811,132395611	Gene ID= ENSG00000197375.12 TPM= 8.47 Transcript Type= NA
chr5	132369710	132370835	132369710	132370835	+	transcript2482.chr5.nnic@SLC22A5	transcript2482.chr5.nnic	protein_coding	132369710,132370448	132370365,132370835	Gene ID= ENSG00000197375.12 TPM= 24.13 Transcript Type= NA
chr5	132369752	132395614	132369752	132395614	+	ENST00000245407.7@SLC22A5	ENST00000245407.7	protein_coding	132369752,132378378,132384147,132385328,132387025,132388921,132390690,132392433,132393676,132394185	132370365,132378481,132384301,132385499,132387151,132389021,132390904,132392615,132393811,132395614	Gene ID= ENSG00000197375.12 TPM= 102.1 Transcript Type= protein_coding
chr5	132369722	132374235	132369722	132374235	+	transcript2489.chr5.nnic@NA	transcript2489.chr5.nnic	NA	132369722	132374235	Gene ID= novel_gene_chr5_2490 TPM= 19.31 Transcript Type= NA
chr5	132424390	132427459	132424390	132427459	-	transcript2504.chr5.nnic@NA	transcript2504.chr5.nnic	NA	132424390	132427459	Gene ID= novel_gene_chr5_2505 TPM= 2.9 Transcript Type= NA
chr5	132481609	132490798	132481609	132490798	-	ENST00000245414.8@IRF1	ENST00000245414.8	protein_coding	132490545,132489392,132487926,132486954,132486795,132486557,132486251,132485667,132484362,132481609	132490798,132489483,132488025,132487130,132486844,132486686,132486373,132485716,132484497,132484075	Gene ID= ENSG00000125347.13 TPM= 4.83 Transcript Type= protein_coding
chr5	132410911	132646079	132410911	132646079	+	ENST00000638568.1@AC116366.3	ENST00000638568.1	protein_coding	132410911,132419823,132449650,132556332,132559284,132575777,132579317,132579862,132587562,132587924,132588687,132589631,132591224,132591877,132594869,132595573,132603300,132603920,132604806,132608615,132609117,132609283,132616003,132618070,132637115,132638081,132640672,132642178	132411041,132419940,132449689,132556473,132559367,132575928,132579502,132580066,132587690,132588089,132588880,132589837,132591406,132592034,132595044,132595810,132603489,132604046,132604999,132608725,132609209,132609396,132616130,132618294,132637200,132638223,132640805,132646079	Gene ID= ENSG00000283782.1 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chr5	132556938	132646344	132556938	132646344	+	ENST00000378823.7@RAD50	ENST00000378823.7	protein_coding	132556938,132559284,132575777,132579317,132579862,132587562,132587924,132588687,132589631,132591224,132591877,132594869,132595573,132603300,132603920,132604806,132608615,132609117,132609283,132616003,132618070,132637115,132638081,132640672,132642178	132557453,132559367,132575928,132579502,132580066,132587690,132588089,132588880,132589837,132591406,132592034,132595044,132595810,132603489,132604046,132604999,132608725,132609209,132609396,132616130,132618294,132637200,132638223,132640805,132646344	Gene ID= ENSG00000113522.13 TPM= 5.31 Transcript Type= protein_coding
chr5	132556942	132608674	132556942	132608674	+	transcript2510.chr5.nnic@RAD50	transcript2510.chr5.nnic	protein_coding	132556942,132559284,132575777,132587562,132587924,132588687,132589631,132591224,132591877,132594869,132595573,132603300,132603920,132604806,132608615	132557453,132559367,132575863,132587690,132588089,132588880,132589837,132591406,132592034,132595044,132595810,132603489,132604046,132604999,132608674	Gene ID= ENSG00000113522.13 TPM= 2.9 Transcript Type= NA
chr5	132556942	132593527	132556942	132593527	+	transcript2513.chr5.nic@RAD50	transcript2513.chr5.nic	protein_coding	132556942,132559284,132575777,132579317,132579862,132587562,132587924,132588687,132589631,132591224,132591877,132592764	132557453,132559367,132575928,132579502,132580066,132587690,132588089,132588880,132589837,132591406,132592034,132593527	Gene ID= ENSG00000113522.13 TPM= 1.93 Transcript Type= NA
chr5	132756001	132777421	132756001	132777421	-	ENST00000296873.11@SEPT8	ENST00000296873.11	protein_coding	132777108,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132760802,132756001	132777421,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992,132758824	Gene ID= ENSG00000164402.13 TPM= 2.9 Transcript Type= protein_coding
chr5	132750817	132777375	132750817	132777375	-	ENST00000378719.6@SEPT8	ENST00000378719.6	protein_coding	132777108,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132760802,132750817	132777375,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992,132752181	Gene ID= ENSG00000164402.13 TPM= 3.86 Transcript Type= protein_coding
chr5	132866560	132868031	132866560	132868031	+	ENST00000378670.7@UQCRQ	ENST00000378670.7	protein_coding	132866560,132866869,132867488	132866687,132867035,132868031	Gene ID= ENSG00000164405.10 TPM= 353.3 Transcript Type= protein_coding
chr5	132866630	132867687	132866630	132867687	+	ENST00000378667.1@UQCRQ	ENST00000378667.1	protein_coding	132866630,132866869,132867488	132866691,132867035,132867687	Gene ID= ENSG00000164405.10 TPM= 375.02 Transcript Type= protein_coding
chr5	132866642	132867699	132866642	132867699	+	ENST00000496429.1@UQCRQ	ENST00000496429.1	protein_coding	132866642,132867488	132866687,132867699	Gene ID= ENSG00000164405.10 TPM= 264.5 Transcript Type= processed_transcript
chr5	132866646	132867683	132866646	132867683	+	ENST00000378665.1@UQCRQ	ENST00000378665.1	protein_coding	132866646,132867488	132867035,132867683	Gene ID= ENSG00000164405.10 TPM= 9.17 Transcript Type= protein_coding
chr5	132866646	132867685	132866646	132867685	+	transcript2535.chr5.nnic@NA	transcript2535.chr5.nnic	NA	132866646	132867685	Gene ID= novel_gene_chr5_2536 TPM= 2.9 Transcript Type= NA
chr5	132896755	132963585	132896755	132963585	-	transcript2537.chr5.nic@AFF4	transcript2537.chr5.nic	protein_coding	132963259,132937067,132934147,132932178,132927121,132904368,132902442,132899587,132899104,132898230,132896755	132963585,132937193,132934941,132932222,132927207,132904404,132902487,132899641,132899141,132898392,132897240	Gene ID= ENSG00000072364.12 TPM= 7.72 Transcript Type= NA
chr5	132996985	133026604	132996985	133026604	-	ENST00000324170.7@ZCCHC10	ENST00000324170.7	protein_coding	133026497,133006759,133000132,132996985	133026604,133006920,133000173,132998850	Gene ID= ENSG00000155329.11 TPM= 23.65 Transcript Type= protein_coding
chr5	132996985	133026583	132996985	133026583	-	transcript2546.chr5.nnic@ZCCHC10	transcript2546.chr5.nnic	protein_coding	133026497,133000132,132996985	133026583,133000173,132998850	Gene ID= ENSG00000155329.11 TPM= 2.41 Transcript Type= NA
chr5	132996996	133026549	132996996	133026549	-	ENST00000355372.6@ZCCHC10	ENST00000355372.6	protein_coding	133026497,133022841,133006759,133000132,132996996	133026549,133022906,133006920,133000173,132998832	Gene ID= ENSG00000155329.11 TPM= 8.69 Transcript Type= protein_coding
chr5	133051948	133104477	133051948	133104477	+	transcript2554.chr5.nnic@HSPA4	transcript2554.chr5.nnic	protein_coding	133051948,133064980,133067417,133070374,133073230,133073993,133076654,133086782,133088404,133089055,133089562,133092700,133096098,133097161,133099545,133101759,133103865,133104233	133052357,133065037,133067557,133070496,133073329,133074126,133076898,133086858,133088555,133089161,133089695,133092789,133096250,133097286,133099652,133101878,133104026,133104477	Gene ID= ENSG00000170606.14 TPM= 7.72 Transcript Type= NA
chr5	133051962	133106449	133051962	133106449	+	ENST00000304858.6@HSPA4	ENST00000304858.6	protein_coding	133051962,133064980,133067417,133070374,133073230,133073993,133076654,133086782,133088404,133089055,133089562,133091193,133092700,133096098,133097161,133099545,133101759,133103865,133104233	133052357,133065037,133067557,133070496,133073329,133074126,133076898,133086858,133088555,133089161,133089695,133091374,133092789,133096250,133097286,133099652,133101878,133104026,133106449	Gene ID= ENSG00000170606.14 TPM= 13.51 Transcript Type= protein_coding
chr5	133955502	133968603	133955502	133968603	-	transcript2560.chr5.nic@C5orf15	transcript2560.chr5.nic	protein_coding	133968446,133967396,133959494,133955502	133968603,133967459,133960020,133956990	Gene ID= ENSG00000113583.7 TPM= 2.41 Transcript Type= NA
chr5	133955502	133968787	133955502	133968787	-	ENST00000231512.4@C5orf15	ENST00000231512.4	protein_coding	133968446,133959494,133955502	133968787,133960020,133956990	Gene ID= ENSG00000113583.7 TPM= 47.78 Transcript Type= protein_coding
chr5	133971952	134004842	133971952	134004842	-	ENST00000395047.6@VDAC1	ENST00000395047.6	protein_coding	134004647,133992946,133992306,133991002,133990855,133980729,133975871,133973791,133971952	134004842,133993018,133992355,133991154,133990907,133980956,133976021,133973848,133972862	Gene ID= ENSG00000213585.10 TPM= 105.55 Transcript Type= protein_coding
chr5	134157941	134176950	134157941	134176950	-	ENST00000328392.10@SKP1	ENST00000328392.10	protein_coding	134176855,134173926,134167170,134160987,134158455,134157941	134176950,134174022,134167243,134161130,134158595,134157960	Gene ID= ENSG00000113558.18 TPM= 2.9 Transcript Type= protein_coding
chr5	134193979	134196146	134193979	134196146	-	transcript2638.chr5.nnic@NA	transcript2638.chr5.nnic	NA	134193979	134196146	Gene ID= novel_gene_chr5_2639 TPM= 1.93 Transcript Type= NA
chr5	134370629	134371043	134370629	134371043	-	transcript2645.chr5.nnic@AC104109.4	transcript2645.chr5.nnic	processed_transcript	134371013,134370629	134371043,134370928	Gene ID= ENSG00000273345.5 TPM= 4.83 Transcript Type= NA
chr5	134371179	134391992	134371179	134391992	+	ENST00000265339.6@UBE2B	ENST00000265339.6	protein_coding	134371179,134374383,134376669,134380719,134388325,134390225	134371639,134374463,134376694,134380808,134388413,134391992	Gene ID= ENSG00000119048.7 TPM= 14.48 Transcript Type= protein_coding
chr5	134402087	134411898	134402087	134411898	-	ENST00000458198.2@CDKN2AIPNL	ENST00000458198.2	protein_coding	134411616,134409903,134402087	134411898,134410002,134402926	Gene ID= ENSG00000237190.3 TPM= 79.16 Transcript Type= protein_coding
chr5	134410548	134411901	134410548	134411901	-	transcript2659.chr5.nnic@NA	transcript2659.chr5.nnic	NA	134410548	134411901	Gene ID= novel_gene_chr5_2660 TPM= 3.86 Transcript Type= NA
chr5	134436701	134439736	134436701	134439736	+	transcript2663.chr5.nnic@NA	transcript2663.chr5.nnic	NA	134436701	134439736	Gene ID= novel_gene_chr5_2664 TPM= 4.83 Transcript Type= NA
chr5	134525621	134579474	134525621	134579474	+	transcript2668.chr5.nic@JADE2	transcript2668.chr5.nic	protein_coding	134525621,134535858,134537989,134552052,134559830,134560746,134562200,134564494,134566116,134573645,134576768,134578494	134526011,134535915,134538083,134552209,134559990,134560957,134562367,134564610,134566580,134573762,134576896,134579474	Gene ID= ENSG00000043143.20 TPM= 6.76 Transcript Type= NA
chr5	134526277	134527689	134526277	134527689	-	transcript2671.chr5.nnic@NA	transcript2671.chr5.nnic	NA	134527568,134526277	134527689,134526708	Gene ID= novel_gene_chr5_2672 TPM= 1.93 Transcript Type= NA
chr5	134601144	134632988	134601144	134632988	-	ENST00000402673.6@SAR1B	ENST00000402673.6	protein_coding	134632728,134623962,134620933,134612691,134609571,134608372,134601144	134632988,134624037,134621052,134612756,134609674,134608503,134607066	Gene ID= ENSG00000152700.13 TPM= 350.41 Transcript Type= protein_coding
chr5	134631602	134632809	134631602	134632809	-	ENST00000504242.1@SAR1B	ENST00000504242.1	protein_coding	134632728,134631602	134632809,134632195	Gene ID= ENSG00000152700.13 TPM= 1.93 Transcript Type= processed_transcript
chr5	134647870	134648728	134647870	134648728	-	transcript2688.chr5.nnic@NA	transcript2688.chr5.nnic	NA	134647870	134648728	Gene ID= novel_gene_chr5_2689 TPM= 5.79 Transcript Type= NA
chr5	134648790	134725422	134648790	134725422	+	transcript2684.chr5.nnic@SEC24A	transcript2684.chr5.nnic	protein_coding	134648790,134661119,134671809,134674615,134675045,134676023,134679602,134682373,134686790,134688181,134692602,134693727,134697126,134697899,134703759,134705327,134708713,134715024,134718069,134720998,134723567,134724980	134649173,134661586,134671886,134674775,134675217,134676125,134679728,134682482,134686902,134688299,134692657,134693933,134697246,134698057,134703932,134705437,134708888,134715161,134718173,134721090,134723670,134725422	Gene ID= ENSG00000113615.12 TPM= 1.93 Transcript Type= NA
chr5	134648806	134662703	134648806	134662703	+	transcript2687.chr5.nic@SEC24A	transcript2687.chr5.nic	protein_coding	134648806,134661119	134649173,134662703	Gene ID= ENSG00000113615.12 TPM= 1.93 Transcript Type= NA
chr5	134648789	134727823	134648789	134727823	+	ENST00000398844.6@SEC24A	ENST00000398844.6	protein_coding	134648789,134661119,134666823,134671809,134674615,134675045,134676023,134679602,134682373,134686790,134688181,134692602,134693727,134697126,134697899,134703759,134705327,134708713,134715024,134718069,134720998,134723567,134724980	134649173,134661586,134666996,134671886,134674775,134675217,134676125,134679728,134682482,134686902,134688299,134692657,134693933,134697246,134698057,134703932,134705437,134708888,134715161,134718173,134721090,134723670,134727823	Gene ID= ENSG00000113615.12 TPM= 1.93 Transcript Type= protein_coding
chr5	134738495	134751385	134738495	134751385	+	transcript2708.chr5.nnic@CAMLG	transcript2708.chr5.nnic	protein_coding	134738495,134741063,134750759	134738792,134741523,134751385	Gene ID= ENSG00000164615.4 TPM= 6.76 Transcript Type= NA
chr5	134738495	134744732	134738495	134744732	+	transcript2717.chr5.nic@CAMLG	transcript2717.chr5.nic	protein_coding	134738495,134741063	134738792,134744732	Gene ID= ENSG00000164615.4 TPM= 1.93 Transcript Type= NA
chr5	134738501	134751391	134738501	134751391	+	transcript2719.chr5.nnic@CAMLG	transcript2719.chr5.nnic	protein_coding	134738501,134750759	134738792,134751391	Gene ID= ENSG00000164615.4 TPM= 5.79 Transcript Type= NA
chr5	134738501	134752160	134738501	134752160	+	ENST00000297156.3@CAMLG	ENST00000297156.3	protein_coding	134738501,134741063,134743987,134750759	134738792,134741523,134744052,134752160	Gene ID= ENSG00000164615.4 TPM= 1.93 Transcript Type= protein_coding
chr5	134738583	134751377	134738583	134751377	+	ENST00000514518.1@CAMLG	ENST00000514518.1	protein_coding	134738583,134743987,134750759	134738792,134744052,134751377	Gene ID= ENSG00000164615.4 TPM= 10.62 Transcript Type= protein_coding
chr5	134758748	134777604	134758748	134777604	+	transcript2697.chr5.nic@DDX46	transcript2697.chr5.nic	protein_coding	134758748,134763904,134766917,134770903,134773696,134777574	134758955,134764092,134767060,134770999,134773861,134777604	Gene ID= ENSG00000145833.15 TPM= 3.86 Transcript Type= NA
chr5	134758804	134829296	134758804	134829296	+	ENST00000354283.8@DDX46	ENST00000354283.8	protein_coding	134758804,134763904,134766917,134770903,134773696,134777574,134781133,134781921,134782945,134784366,134785465,134788513,134790470,134794850,134795988,134807748,134811221,134811696,134816430,134817496,134818860,134826947,134828659	134758955,134764092,134767060,134770999,134773861,134777725,134781246,134782086,134783065,134784541,134785586,134788591,134790552,134795014,134796150,134807941,134811358,134811845,134816603,134817714,134819004,134827020,134829296	Gene ID= ENSG00000145833.15 TPM= 3.86 Transcript Type= protein_coding
chr5	134845988	134859737	134845988	134859737	+	ENST00000394976.3@C5orf24	ENST00000394976.3	protein_coding	134845988,134854898	134846212,134859737	Gene ID= ENSG00000181904.8 TPM= 6.76 Transcript Type= protein_coding
chr5	134846096	134859732	134846096	134859732	+	ENST00000504727.1@C5orf24	ENST00000504727.1	protein_coding	134846096,134854898,134857357	134846212,134855327,134859732	Gene ID= ENSG00000181904.8 TPM= 3.86 Transcript Type= protein_coding
chr5	134873803	134901525	134873803	134901525	+	ENST00000358387.8@TXNDC15	ENST00000358387.8	protein_coding	134873803,134887695,134893492,134896294,134899489	134874530,134888182,134893655,134896424,134901525	Gene ID= ENSG00000113621.14 TPM= 12.55 Transcript Type= protein_coding
chr5	134904721	134905688	134904721	134905688	+	transcript2744.chr5.nnic@NA	transcript2744.chr5.nnic	NA	134904721	134905688	Gene ID= novel_gene_chr5_2745 TPM= 3.86 Transcript Type= NA
chr5	134904906	134961277	134904906	134961277	+	ENST00000254908.10@PCBD2	ENST00000254908.10	protein_coding	134904906,134910335,134959040,134960586	134905223,134910466,134959120,134961277	Gene ID= ENSG00000132570.14 TPM= 3.86 Transcript Type= protein_coding
chr5	134905235	134905691	134905235	134905691	+	ENST00000623591.1@AC006077.2	ENST00000623591.1	TEC	134905235	134905691	Gene ID= ENSG00000279799.1 TPM= 3.86 Transcript Type= TEC
chr5	134967906	135011707	134967906	135011707	+	ENST00000282611.7@CATSPER3	ENST00000282611.7	protein_coding	134967906,134969939,134996273,135007957,135008841,135009371,135010373,135011521	134968089,134970092,134996512,135008139,135008981,135009490,135010530,135011707	Gene ID= ENSG00000152705.7 TPM= 1.93 Transcript Type= protein_coding
chr5	135027735	135034298	135027735	135034298	-	ENST00000265340.11@PITX1	ENST00000265340.11	protein_coding	135033713,135031276,135027735	135034298,135031508,135029321	Gene ID= ENSG00000069011.15 TPM= 155.42 Transcript Type= protein_coding
chr5	135035927	135037858	135035927	135037858	+	transcript2755.chr5.nnic@NA	transcript2755.chr5.nnic	NA	135035927	135037858	Gene ID= novel_gene_chr5_2756 TPM= 4.83 Transcript Type= NA
chr5	135334381	135399261	135334381	135399261	-	transcript2764.chr5.nic@H2AFY	transcript2764.chr5.nic	protein_coding	135399062,135388922,135370036,135369406,135360497,135350823,135345968,135343260,135334381	135399261,135389126,135370142,135369603,135360604,135350913,135346057,135343434,135335141	Gene ID= ENSG00000113648.16 TPM= 75.29 Transcript Type= NA
chr5	135333900	135399622	135333900	135399622	-	ENST00000511689.5@H2AFY	ENST00000511689.5	protein_coding	135399062,135388922,135370036,135369406,135360497,135352946,135345968,135343260,135333900	135399622,135389126,135370142,135369603,135360607,135353045,135346057,135343434,135335141	Gene ID= ENSG00000113648.16 TPM= 1.93 Transcript Type= protein_coding
chr5	135334410	135399211	135334410	135399211	-	ENST00000312469.8@H2AFY	ENST00000312469.8	protein_coding	135399062,135388922,135370036,135369406,135360497,135350823,135345968,135343260,135334410	135399211,135389126,135370142,135369603,135360607,135350913,135346057,135343434,135335141	Gene ID= ENSG00000113648.16 TPM= 146.73 Transcript Type= protein_coding
chr5	136028895	136063817	136028895	136063817	+	ENST00000442011.6@TGFBI	ENST00000442011.6	protein_coding	136028895,136033763,136044058,136046335,136046851,136047274,136049439,136052907,136053943,136054716,136055680,136056665,136059090,136060834,136061500,136062663,136063186	136029189,136033861,136044122,136046495,136047015,136047420,136049580,136053119,136054080,136054861,136055816,136056795,136059214,136060936,136061579,136062687,136063817	Gene ID= ENSG00000120708.16 TPM= 31.86 Transcript Type= protein_coding
chr5	136132845	136182732	136132845	136182732	+	ENST00000545279.5@SMAD5	ENST00000545279.5	protein_coding	136132845,136147832,136153592,136160856,136163272,136172434,136174376,136177337	136132962,136147906,136154163,136161107,136163391,136172655,136174632,136182732	Gene ID= ENSG00000113658.16 TPM= 1.45 Transcript Type= protein_coding
chr5	136132847	136182734	136132847	136182734	+	ENST00000545620.5@SMAD5	ENST00000545620.5	protein_coding	136132847,136153592,136160856,136163272,136172434,136174376,136177337	136132962,136154163,136161107,136163391,136172655,136174632,136182734	Gene ID= ENSG00000113658.16 TPM= 3.38 Transcript Type= protein_coding
chr5	137751572	137754369	137751572	137754369	-	transcript2793.chr5.nnic@NA	transcript2793.chr5.nnic	NA	137751572	137754369	Gene ID= novel_gene_chr5_2794 TPM= 10.62 Transcript Type= NA
chr5	137867791	137887851	137867791	137887851	+	ENST00000239926.8@MYOT	ENST00000239926.8	protein_coding	137867791,137870441,137875829,137877520,137880816,137881973,137883384,137886048,137886864,137887213	137867953,137871007,137876003,137877621,137880865,137882105,137883591,137886213,137886997,137887851	Gene ID= ENSG00000120729.9 TPM= 1148.72 Transcript Type= protein_coding
chr5	138156882	138178629	138156882	138178629	-	transcript2854.chr5.nnic@BRD8	transcript2854.chr5.nnic	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138166518,138165828,138164714,138164320,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178629,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166727,138166108,138165166,138164413,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 4.1 Transcript Type= NA
chr5	138156882	138178630	138156882	138178630	-	ENST00000230901.9@BRD8	ENST00000230901.9	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178630,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 36.44 Transcript Type= protein_coding
chr5	138156897	138178669	138156897	138178669	-	ENST00000411594.6@BRD8	ENST00000411594.6	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138156897	138178669,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138157267	Gene ID= ENSG00000112983.17 TPM= 1.21 Transcript Type= protein_coding
chr5	138156882	138178633	138156882	138178633	-	ENST00000402931.5@BRD8	ENST00000402931.5	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178633,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 8.45 Transcript Type= protein_coding
chr5	138187648	138213343	138187648	138213343	-	ENST00000394886.6@CDC23	ENST00000394886.6	protein_coding	138213152,138212991,138206547,138202113,138201343,138201107,138198605,138198426,138198199,138192504,138192269,138191862,138191474,138189828,138189633,138187648	138213343,138213063,138206684,138202155,138201448,138201239,138198782,138198523,138198280,138192657,138192388,138191937,138191535,138189906,138189752,138189148	Gene ID= ENSG00000094880.10 TPM= 20.27 Transcript Type= protein_coding
chr5	138205871	138213343	138205871	138213343	-	ENST00000394884.7@CDC23	ENST00000394884.7	protein_coding	138213152,138212991,138205871	138213343,138213063,138206684	Gene ID= ENSG00000094880.10 TPM= 7.72 Transcript Type= protein_coding
chr5	138338032	138349729	138338032	138349729	+	ENST00000239906.9@FAM53C	ENST00000239906.9	protein_coding	138338032,138341184,138341809,138344825,138346702	138338307,138341413,138341866,138345609,138349729	Gene ID= ENSG00000120709.10 TPM= 52.13 Transcript Type= protein_coding
chr5	138338262	138349729	138338262	138349729	+	transcript2867.chr5.nic@FAM53C	transcript2867.chr5.nic	protein_coding	138338262,138341809,138344825,138346702	138338307,138341866,138345609,138349729	Gene ID= ENSG00000120709.10 TPM= 38.61 Transcript Type= NA
chr5	138352596	138437027	138352596	138437027	+	ENST00000314358.9@KDM3B	ENST00000314358.9	protein_coding	138352596,138372674,138375093,138377720,138379584,138381516,138386022,138391013,138393171,138398178,138399860,138415132,138417483,138418953,138420706,138424075,138425411,138426975,138427189,138427967,138429826,138430249,138431425,138435620	138352987,138372841,138375206,138377825,138379708,138381590,138386621,138392261,138393372,138398392,138400012,138415239,138417610,138419232,138420962,138424341,138425582,138427065,138427319,138428086,138429965,138430425,138431559,138437027	Gene ID= ENSG00000120733.13 TPM= 23.81 Transcript Type= protein_coding
chr5	138439017	138446964	138439017	138446964	+	ENST00000378339.6@REEP2	ENST00000378339.6	protein_coding	138439017,138441016,138441385,138444415,138444754,138445228,138445468,138445683	138439240,138441088,138441461,138444535,138444867,138445375,138445598,138446964	Gene ID= ENSG00000132563.15 TPM= 7.72 Transcript Type= protein_coding
chr5	138439087	138446969	138439087	138446969	+	ENST00000254901.9@REEP2	ENST00000254901.9	protein_coding	138439087,138441016,138441385,138444415,138444754,138445234,138445468,138445683	138439240,138441088,138441461,138444535,138444867,138445375,138445598,138446969	Gene ID= ENSG00000132563.15 TPM= 1.93 Transcript Type= protein_coding
chr5	138465490	138469315	138465490	138469315	+	ENST00000239938.4@EGR1	ENST00000239938.4	protein_coding	138465490,138466757	138466068,138469315	Gene ID= ENSG00000120738.7 TPM= 34.75 Transcript Type= protein_coding
chr5	138507441	138543170	138507441	138543170	-	transcript2878.chr5.nic@ETF1	transcript2878.chr5.nic	protein_coding	138543097,138542833,138529555,138518692,138517561,138513568,138512764,138511475,138511045,138510565,138508669,138507441	138543170,138542936,138529678,138518867,138517700,138513706,138512954,138511604,138511200,138510629,138508816,138508387	Gene ID= ENSG00000120705.12 TPM= 4.34 Transcript Type= NA
chr5	138506099	138543300	138506099	138543300	-	ENST00000360541.9@ETF1	ENST00000360541.9	protein_coding	138543097,138542833,138518692,138517561,138513568,138512764,138511475,138511045,138510565,138508669,138506099	138543300,138542936,138518867,138517700,138513706,138512954,138511604,138511200,138510629,138508816,138508387	Gene ID= ENSG00000120705.12 TPM= 89.29 Transcript Type= protein_coding
chr5	138543550	138544231	138543550	138544231	+	transcript2884.chr5.nnic@NA	transcript2884.chr5.nnic	NA	138543550	138544231	Gene ID= novel_gene_chr5_2885 TPM= 2.9 Transcript Type= NA
chr5	138554882	138575444	138554882	138575444	-	ENST00000297185.7@HSPA9	ENST00000297185.7	protein_coding	138575238,138574068,138573763,138570960,138568925,138567649,138567455,138567001,138566626,138561580,138559864,138558553,138557869,138557402,138556774,138556452,138554882	138575444,138574126,138573850,138571141,138569049,138567722,138567561,138567163,138566718,138561789,138560091,138558657,138557986,138557496,138556866,138556592,138556114	Gene ID= ENSG00000113013.12 TPM= 222.99 Transcript Type= protein_coding
chr5	138753423	138935034	138753423	138935034	+	ENST00000302763.11@CTNNA1	ENST00000302763.11	protein_coding	138753423,138781923,138783177,138810038,138812183,138824530,138827515,138886212,138887490,138904349,138917742,138924510,138925256,138929246,138930473,138930830,138932578,138933802	138753510,138782029,138783372,138810204,138812302,138824799,138827718,138886292,138887642,138904441,138917898,138924710,138925407,138929356,138930654,138930935,138932712,138935034	Gene ID= ENSG00000044115.20 TPM= 88.81 Transcript Type= protein_coding
chr5	138946720	139198398	138946720	139198398	-	ENST00000394817.6@SIL1	ENST00000394817.6	protein_coding	139198269,139127739,139121035,139050938,139042620,139026801,139021171,138951788,138951171,138946720	139198398,139127853,139121173,139051046,139042719,139026992,139021292,138951884,138951335,138947473	Gene ID= ENSG00000120725.12 TPM= 8.69 Transcript Type= protein_coding
chr5	139274103	139330394	139274103	139330394	+	ENST00000361059.7@MATR3	ENST00000361059.7	protein_coding	139274103,139276121,139278327,139279051,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139274161,139276150,139278408,139279129,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330394	Gene ID= ENSG00000280987.4 TPM= 7.72 Transcript Type= protein_coding
chr5	139274104	139329757	139274104	139329757	+	ENST00000504203.5@MATR3	ENST00000504203.5	protein_coding	139274104,139276121,139278327,139279051,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139274161,139276150,139278408,139279129,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139329757	Gene ID= ENSG00000280987.4 TPM= 7.72 Transcript Type= protein_coding
chr5	139293666	139330441	139293666	139330441	+	transcript2992.chr5.nic@MATR3	transcript2992.chr5.nic	protein_coding	139293666,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325296,139326163,139329345	139293805,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330441	Gene ID= ENSG00000015479.18 TPM= 13.51 Transcript Type= NA
chr5	139293648	139331359	139293648	139331359	+	ENST00000394805.7@MATR3	ENST00000394805.7	protein_coding	139293648,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139293805,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139331359	Gene ID= ENSG00000015479.18 TPM= 157.35 Transcript Type= protein_coding
chr5	139293778	139330441	139293778	139330441	+	ENST00000618441.5@MATR3	ENST00000618441.5	protein_coding	139293778,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139294028,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330441	Gene ID= ENSG00000015479.18 TPM= 14.72 Transcript Type= protein_coding
chr5	139293750	139330002	139293750	139330002	+	ENST00000503811.5@MATR3	ENST00000503811.5	protein_coding	139293750,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139294028,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330002	Gene ID= ENSG00000015479.18 TPM= 3.86 Transcript Type= protein_coding
chr5	139293722	139330405	139293722	139330405	+	ENST00000502499.5@MATR3	ENST00000502499.5	protein_coding	139293722,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139293805,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330405	Gene ID= ENSG00000015479.18 TPM= 1.93 Transcript Type= protein_coding
chr5	139341832	139369698	139341832	139369698	+	ENST00000265192.8@PAIP2	ENST00000265192.8	protein_coding	139341832,139363759,139364564,139368733	139341980,139363922,139364743,139369698	Gene ID= ENSG00000120727.12 TPM= 241.33 Transcript Type= protein_coding
chr5	139390592	139395713	139390592	139395713	-	ENST00000434752.3@PROB1	ENST00000434752.3	protein_coding	139390592	139395713	Gene ID= ENSG00000228672.3 TPM= 182.44 Transcript Type= protein_coding
chr5	139419068	139439532	139419068	139439532	-	transcript3047.chr5.nic@DNAJC18	transcript3047.chr5.nic	protein_coding	139439406,139437372,139428538,139426172,139425005,139422708,139420053,139419068	139439532,139437558,139428683,139426357,139425114,139422817,139420225,139419172	Gene ID= ENSG00000170464.9 TPM= 2.9 Transcript Type= NA
chr5	139448556	139462743	139448556	139462743	-	ENST00000618155.2@ECSCR	ENST00000618155.2	protein_coding	139462610,139458139,139457757,139457545,139456474,139455323,139454825,139454602,139449078,139448556	139462743,139458183,139457807,139457604,139456518,139455436,139454923,139454638,139449174,139448908	Gene ID= ENSG00000249751.3 TPM= 5.79 Transcript Type= protein_coding
chr5	139475534	139482347	139475534	139482347	-	transcript3056.chr5.nic@TMEM173	transcript3056.chr5.nic	protein_coding	139482210,139481478,139481159,139480790,139478270,139477329,139475534	139482347,139481704,139481342,139480898,139478508,139477515,139476454	Gene ID= ENSG00000184584.12 TPM= 2.9 Transcript Type= NA
chr5	139561316	139627692	139561316	139627692	+	transcript3064.chr5.nic@UBE2D2	transcript3064.chr5.nic	protein_coding	139561316,139562244,139600372,139614586,139614697,139614861,139623368,139626756	139561815,139562407,139600435,139614617,139614774,139614966,139623461,139627692	Gene ID= ENSG00000131508.15 TPM= 7.72 Transcript Type= NA
chr5	139561166	139628433	139561166	139628433	+	ENST00000398733.7@UBE2D2	ENST00000398733.7	protein_coding	139561166,139600372,139614586,139614697,139614861,139623368,139626756	139561815,139600435,139614617,139614774,139614966,139623461,139628433	Gene ID= ENSG00000131508.15 TPM= 84.95 Transcript Type= protein_coding
chr5	139561167	139623444	139561167	139623444	+	ENST00000505007.5@UBE2D2	ENST00000505007.5	protein_coding	139561167,139562244,139600372,139614586,139614697,139614861,139623368	139561815,139562407,139600435,139614617,139614774,139614966,139623444	Gene ID= ENSG00000131508.15 TPM= 3.38 Transcript Type= protein_coding
chr5	139648349	139683882	139648349	139683882	+	transcript3073.chr5.nic@CXXC5	transcript3073.chr5.nic	protein_coding	139648349,139679847,139680364,139682863	139648845,139679940,139681447,139683882	Gene ID= ENSG00000171604.11 TPM= 7.24 Transcript Type= NA
chr5	139648292	139683882	139648292	139683882	+	ENST00000302517.7@CXXC5	ENST00000302517.7	protein_coding	139648292,139680364,139682863	139648845,139681447,139683882	Gene ID= ENSG00000171604.11 TPM= 120.18 Transcript Type= protein_coding
chr5	139847649	140043316	139847649	140043316	-	transcript3082.chr5.nic@NRG2	transcript3082.chr5.nic	protein_coding	140042370,139887340,139880856,139871721,139865549,139865115,139855676,139852904,139852432,139851604,139847649	140043316,139887511,139880974,139871841,139865625,139865173,139855778,139853027,139852559,139851831,139848697	Gene ID= ENSG00000158458.19 TPM= 13.51 Transcript Type= NA
chr5	139847675	140043294	139847675	140043294	-	ENST00000361474.5@NRG2	ENST00000361474.5	protein_coding	140042370,139887340,139880856,139871721,139865549,139855676,139852904,139852432,139851604,139847675	140043294,139887511,139880974,139871841,139865625,139855778,139853027,139852559,139851831,139848697	Gene ID= ENSG00000158458.19 TPM= 1.93 Transcript Type= protein_coding
chr5	139860373	139862463	139860373	139862463	-	transcript3092.chr5.nnic@NA	transcript3092.chr5.nnic	NA	139860373	139862463	Gene ID= novel_gene_chr5_3093 TPM= 1.93 Transcript Type= NA
chr5	140037770	140041683	140037770	140041683	+	transcript3090.chr5.nnic@NA	transcript3090.chr5.nnic	NA	140037770	140041683	Gene ID= novel_gene_chr5_3091 TPM= 28.96 Transcript Type= NA
chr5	140107793	140115276	140107793	140115276	+	transcript3099.chr5.nnic@PURA	transcript3099.chr5.nnic	protein_coding	140107793,140114041	140108219,140115276	Gene ID= ENSG00000185129.5 TPM= 27.99 Transcript Type= NA
chr5	140107835	140110191	140107835	140110191	+	transcript3102.chr5.nnic@NA	transcript3102.chr5.nnic	NA	140107835	140110191	Gene ID= novel_gene_chr5_3103 TPM= 2.9 Transcript Type= NA
chr5	140116865	140119409	140116865	140119409	+	transcript3104.chr5.nnic@NA	transcript3104.chr5.nnic	NA	140116865	140119409	Gene ID= novel_gene_chr5_3105 TPM= 1.93 Transcript Type= NA
chr5	140128518	140128801	140128518	140128801	+	transcript3106.chr5.nnic@NA	transcript3106.chr5.nnic	NA	140128518	140128801	Gene ID= novel_gene_chr5_3107 TPM= 3.86 Transcript Type= NA
chr5	140175169	140228910	140175169	140228910	+	transcript3115.chr5.nnic@CYSTM1	transcript3115.chr5.nnic	protein_coding	140175169,140194446,140228730	140175285,140194652,140228910	Gene ID= ENSG00000120306.9 TPM= 14.48 Transcript Type= NA
chr5	140174642	140243789	140174642	140243789	+	ENST00000261811.5@CYSTM1	ENST00000261811.5	protein_coding	140174642,140194446,140243305	140175285,140194652,140243789	Gene ID= ENSG00000120306.9 TPM= 656.41 Transcript Type= protein_coding
chr5	140175126	140243789	140175126	140243789	+	transcript3122.chr5.nic@CYSTM1	transcript3122.chr5.nic	protein_coding	140175126,140243305	140175285,140243789	Gene ID= ENSG00000120306.9 TPM= 52.13 Transcript Type= NA
chr5	140245039	140303121	140245039	140303121	-	ENST00000261813.8@PFDN1	ENST00000261813.8	protein_coding	140303041,140300416,140281449,140245039	140303121,140300582,140281533,140246057	Gene ID= ENSG00000113068.9 TPM= 26.06 Transcript Type= protein_coding
chr5	140332843	140346631	140332843	140346631	-	ENST00000230990.6@HBEGF	ENST00000230990.6	protein_coding	140346283,140345911,140342635,140335872,140334658,140332843	140346631,140346084,140342812,140336027,140334748,140334280	Gene ID= ENSG00000113070.7 TPM= 28.96 Transcript Type= protein_coding
chr5	140400508	140401441	140400508	140401441	-	transcript3132.chr5.nnic@NA	transcript3132.chr5.nnic	NA	140400508	140401441	Gene ID= novel_gene_chr5_3133 TPM= 4.83 Transcript Type= NA
chr5	140401814	140524115	140401814	140524115	+	transcript3136.chr5.nic@ANKHD1	transcript3136.chr5.nic	protein_coding	140401814,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472295,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524115	Gene ID= ENSG00000131503.20 TPM= 10.3 Transcript Type= NA
chr5	140401814	140524115	140401814	140524115	+	transcript3139.chr5.nic@ANKHD1	transcript3139.chr5.nic	protein_coding	140401814,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239,140482580,140485121,140485589,140486958,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472295,140482667,140485248,140485732,140487060,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524115	Gene ID= ENSG00000131503.20 TPM= 3.06 Transcript Type= NA
chr5	140401814	140524115	140401814	140524115	+	transcript3143.chr5.nic@ANKHD1	transcript3143.chr5.nic	protein_coding	140401814,140436104,140438503,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524115	Gene ID= ENSG00000131503.20 TPM= 4.51 Transcript Type= NA
chr5	140401814	140472477	140401814	140472477	+	transcript3156.chr5.nnic@ANKHD1	transcript3156.chr5.nnic	protein_coding	140401814,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239,140472381	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472295,140472477	Gene ID= ENSG00000131503.20 TPM= 4.94 Transcript Type= NA
chr5	140401814	140472476	140401814	140472476	+	ENST00000616482.4@ANKHD1	ENST00000616482.4	protein_coding	140401814,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140472239	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140472476	Gene ID= ENSG00000131503.20 TPM= 1.08 Transcript Type= protein_coding
chr5	140510110	140539849	140510110	140539849	+	ENST00000431508.5@ANKHD1	ENST00000431508.5	protein_coding	140510110,140512828,140513363,140524066,140525996,140526928,140527873,140528184,140535362,140537338,140538086,140538919,140539359	140510181,140512923,140513479,140524240,140526443,140527074,140528022,140529796,140535538,140537589,140538261,140539083,140539849	Gene ID= ENSG00000131503.20 TPM= 2.41 Transcript Type= protein_coding
chr5	140401814	140539856	140401814	140539856	+	ENST00000360839.6@ANKHD1	ENST00000360839.6	protein_coding	140401814,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066,140525996,140526928,140527873,140528184,140535362,140537389,140538086,140538919,140539359	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524240,140526443,140527074,140528022,140529796,140535538,140537589,140538261,140539083,140539856	Gene ID= ENSG00000131503.20 TPM= 3.38 Transcript Type= protein_coding
chr5	140401854	140472477	140401854	140472477	+	ENST00000394723.7@ANKHD1	ENST00000394723.7	protein_coding	140401854,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472477	Gene ID= ENSG00000131503.20 TPM= 44.89 Transcript Type= protein_coding
chr5	140401814	140466414	140401814	140466414	+	transcript3162.chr5.nic@ANKHD1-EIF4EBP3	transcript3162.chr5.nic	protein_coding	140401814,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140466414	Gene ID= ENSG00000254996.5 TPM= 2.9 Transcript Type= NA
chr5	140489044	140490411	140489044	140490411	-	transcript3169.chr5.nnic@NA	transcript3169.chr5.nnic	NA	140489044	140490411	Gene ID= novel_gene_chr5_3170 TPM= 1.93 Transcript Type= NA
chr5	140547719	140549578	140547719	140549578	+	transcript3182.chr5.nnic@ANKHD1-EIF4EBP3	transcript3182.chr5.nnic	protein_coding	140547719,140548906,140549234	140547886,140549076,140549578	Gene ID= ENSG00000254996.5 TPM= 5.31 Transcript Type= NA
chr5	140550068	140557456	140550068	140557456	-	ENST00000602775.5@SRA1	ENST00000602775.5	protein_coding	140557147,140551982,140551061,140550068	140557456,140552184,140551169,140550911	Gene ID= ENSG00000213523.10 TPM= 25.1 Transcript Type= retained_intron
chr5	140547666	140549578	140547666	140549578	+	ENST00000310331.2@EIF4EBP3	ENST00000310331.2	protein_coding	140547666,140548906,140549234	140547840,140549076,140549578	Gene ID= ENSG00000243056.1 TPM= 97.98 Transcript Type= protein_coding
chr5	140558272	140564689	140558272	140564689	-	ENST00000357560.8@APBB3	ENST00000357560.8	protein_coding	140564197,140563752,140563594,140562663,140562353,140562100,140561844,140561587,140561365,140561018,140560639,140560313,140558272	140564689,140563915,140563670,140562723,140562499,140562227,140561849,140561701,140561449,140561101,140560754,140560504,140558821	Gene ID= ENSG00000113108.19 TPM= 6.27 Transcript Type= protein_coding
chr5	140564456	140569103	140564456	140569103	+	ENST00000323146.7@SLC35A4	ENST00000323146.7	protein_coding	140564456,140565873,140566565	140564858,140565971,140569103	Gene ID= ENSG00000176087.14 TPM= 109.4 Transcript Type= protein_coding
chr5	140564827	140569098	140564827	140569098	+	transcript3184.chr5.nnic@SLC35A4	transcript3184.chr5.nnic	protein_coding	140564827,140565748,140566565	140564858,140565971,140569098	Gene ID= ENSG00000176087.14 TPM= 34.1 Transcript Type= NA
chr5	140564835	140569098	140564835	140569098	+	ENST00000612662.1@SLC35A4	ENST00000612662.1	protein_coding	140564835,140565873,140566565	140564858,140565971,140569098	Gene ID= ENSG00000176087.14 TPM= 42.79 Transcript Type= protein_coding
chr5	140631728	140633701	140631728	140633701	-	ENST00000302014.10@CD14	ENST00000302014.10	protein_coding	140633069,140631728	140633701,140632980	Gene ID= ENSG00000170458.13 TPM= 16.41 Transcript Type= protein_coding
chr5	140645285	140647785	140645285	140647785	-	ENST00000252102.8@NDUFA2	ENST00000252102.8	protein_coding	140647483,140647256,140645285	140647785,140647362,140645678	Gene ID= ENSG00000131495.8 TPM= 20.27 Transcript Type= protein_coding
chr5	140647770	140662478	140647770	140662478	+	ENST00000417647.6@IK	ENST00000417647.6	protein_coding	140647770,140648471,140651714,140652088,140652977,140653938,140654516,140654681,140655829,140657554,140658737,140658939,140659315,140659756,140660115,140660758,140661620,140661899,140662179,140662302	140647924,140648537,140651806,140652147,140653144,140654052,140654586,140654727,140655992,140657662,140658776,140659164,140659333,140659834,140660195,140660815,140661708,140662007,140662213,140662478	Gene ID= ENSG00000113141.17 TPM= 171.83 Transcript Type= protein_coding
chr5	140664805	140674119	140664805	140674119	+	transcript3210.chr5.nic@WDR55	transcript3210.chr5.nic	protein_coding	140664805,140668234,140668415,140668612,140668891,140669079,140669333,140671269	140665103,140668334,140668502,140668791,140668990,140669248,140669690,140674119	Gene ID= ENSG00000120314.18 TPM= 4.18 Transcript Type= NA
chr5	140664676	140672345	140664676	140672345	+	ENST00000358337.9@WDR55	ENST00000358337.9	protein_coding	140664676,140668234,140668415,140668612,140668891,140669079,140669333	140665103,140668334,140668502,140668791,140668990,140669248,140672345	Gene ID= ENSG00000120314.18 TPM= 45.69 Transcript Type= protein_coding
chr5	140664805	140670959	140664805	140670959	+	transcript3216.chr5.nic@WDR55	transcript3216.chr5.nic	protein_coding	140664805,140668234,140668415,140668612,140668891,140669333	140665103,140668334,140668502,140668791,140669248,140670959	Gene ID= ENSG00000120314.18 TPM= 3.86 Transcript Type= NA
chr5	140673904	140691393	140673904	140691393	-	transcript3199.chr5.nnic@HARS	transcript3199.chr5.nnic	protein_coding	140691215,140690855,140687746,140683100,140679788,140679002,140677908,140677655,140677327,140676989,140676654,140675017,140674679,140673904	140691393,140690944,140687933,140683219,140679883,140679127,140678015,140677753,140677420,140677116,140676896,140675133,140674825,140674328	Gene ID= ENSG00000170445.12 TPM= 4.05 Transcript Type= NA
chr5	140673173	140692024	140673173	140692024	-	ENST00000504156.5@HARS	ENST00000504156.5	protein_coding	140691215,140690855,140683100,140679788,140679002,140677908,140677655,140677327,140676989,140676654,140675017,140674679,140673173	140692024,140690944,140683219,140679883,140679127,140678015,140677753,140677420,140677116,140676896,140675133,140674825,140674328	Gene ID= ENSG00000170445.12 TPM= 63.71 Transcript Type= protein_coding
chr5	140673904	140691393	140673904	140691393	-	transcript3204.chr5.nnic@HARS	transcript3204.chr5.nnic	protein_coding	140691215,140690855,140683100,140679788,140679002,140677655,140677327,140676989,140676654,140675017,140674679,140673904	140691393,140690944,140683219,140679883,140679127,140677753,140677420,140677116,140676896,140675133,140674825,140674328	Gene ID= ENSG00000170445.12 TPM= 4.05 Transcript Type= NA
chr5	140673904	140691393	140673904	140691393	-	transcript3206.chr5.nic@HARS	transcript3206.chr5.nic	protein_coding	140691215,140690855,140683100,140679788,140677655,140677327,140676989,140676654,140675017,140674679,140673904	140691393,140690944,140683219,140679883,140679127,140677420,140677116,140676896,140675133,140674825,140674328	Gene ID= ENSG00000170445.12 TPM= 3.81 Transcript Type= NA
chr5	140673915	140691341	140673915	140691341	-	ENST00000438307.6@HARS	ENST00000438307.6	protein_coding	140691215,140690855,140679788,140679002,140677908,140677655,140677327,140676989,140676654,140675017,140674679,140673915	140691341,140690944,140679883,140679127,140678015,140677753,140677420,140677116,140676896,140675133,140674825,140674328	Gene ID= ENSG00000170445.12 TPM= 4.3 Transcript Type= protein_coding
chr5	140673904	140691377	140673904	140691377	-	ENST00000457527.6@HARS	ENST00000457527.6	protein_coding	140691215,140690855,140683100,140679788,140679062,140677908,140677655,140677327,140676989,140676654,140675017,140674679,140673904	140691377,140690944,140683219,140679883,140679127,140678015,140677753,140677420,140677116,140676896,140675133,140674825,140674328	Gene ID= ENSG00000170445.12 TPM= 5.02 Transcript Type= protein_coding
chr5	140691455	140699291	140691455	140699291	+	transcript3222.chr5.nic@HARS2	transcript3222.chr5.nic	protein_coding	140691455,140691607,140693591,140693935,140694185,140695508,140695738,140696103,140696521,140696943,140697164,140697569,140697932,140698493	140691515,140691756,140693665,140694054,140694280,140695633,140695845,140696201,140696614,140697070,140697406,140697685,140698078,140699291	Gene ID= ENSG00000112855.14 TPM= 16.65 Transcript Type= NA
chr5	140691426	140699291	140691426	140699291	+	ENST00000230771.7@HARS2	ENST00000230771.7	protein_coding	140691426,140693591,140693935,140694185,140695508,140695738,140696103,140696521,140696943,140697164,140697569,140697932,140698493	140691756,140693665,140694054,140694280,140695633,140695845,140696201,140696614,140697070,140697406,140697685,140698078,140699291	Gene ID= ENSG00000112855.14 TPM= 60.41 Transcript Type= protein_coding
chr5	140691438	140699291	140691438	140699291	+	transcript3226.chr5.nic@HARS2	transcript3226.chr5.nic	protein_coding	140691438,140693591,140693935,140694185,140695508,140695738,140696521,140696943,140697164,140697569,140697932,140698493	140691756,140693665,140694054,140694280,140695633,140695845,140696614,140697070,140697406,140697685,140698078,140699291	Gene ID= ENSG00000112855.14 TPM= 7.32 Transcript Type= NA
chr5	140700334	140706676	140700334	140706676	+	ENST00000274712.7@ZMAT2	ENST00000274712.7	protein_coding	140700334,140700819,140702006,140703918,140704426,140705613	140700478,140700912,140702129,140703991,140704571,140706676	Gene ID= ENSG00000146007.10 TPM= 8.69 Transcript Type= protein_coding
chr5	140726158	140726246	140726158	140726246	+	ENST00000365645.1@VTRNA1-3	ENST00000365645.1	misc_RNA	140726158	140726246	Gene ID= ENSG00000202515.1 TPM= 1.93 Transcript Type= misc_RNA
chr5	141318488	141320821	141318488	141320821	-	ENST00000313368.7@TAF7	ENST00000313368.7	protein_coding	141318488	141320821	Gene ID= ENSG00000178913.7 TPM= 458.52 Transcript Type= protein_coding
chr5	141320370	141325978	141320370	141325978	+	transcript3237.chr5.nnic@NA	transcript3237.chr5.nnic	NA	141320370,141324737	141321103,141325978	Gene ID= novel_gene_chr5_3238 TPM= 2.9 Transcript Type= NA
chr5	141338972	141512979	141338972	141512979	+	ENST00000394576.2@PCDHGA2	ENST00000394576.2	protein_coding	141338972,141494807,141505393,141510947	141341395,141494865,141505481,141512979	Gene ID= ENSG00000081853.14 TPM= 4.44 Transcript Type= protein_coding
chr5	141343868	141512979	141343868	141512979	+	ENST00000253812.7@PCDHGA3	ENST00000253812.7	protein_coding	141343868,141494807,141505393,141510947	141346457,141494865,141505481,141512979	Gene ID= ENSG00000254245.2 TPM= 5.41 Transcript Type= protein_coding
chr5	141355025	141512979	141355025	141512979	+	ENST00000571252.2@PCDHGA4	ENST00000571252.2	protein_coding	141355025,141494807,141505393,141510947	141357621,141494865,141505481,141512979	Gene ID= ENSG00000262576.2 TPM= 4.44 Transcript Type= protein_coding
chr5	141364331	141512979	141364331	141512979	+	ENST00000518069.1@PCDHGA5	ENST00000518069.1	protein_coding	141364331,141494807,141505393,141510947	141366751,141494865,141505481,141512979	Gene ID= ENSG00000253485.2 TPM= 3.48 Transcript Type= protein_coding
chr5	141476003	141512979	141476003	141512979	+	ENST00000308177.4@PCDHGC3	ENST00000308177.4	protein_coding	141476003,141494807,141505393,141510947	141478546,141494865,141505481,141512979	Gene ID= ENSG00000240184.6 TPM= 11.2 Transcript Type= protein_coding
chr5	141515021	141619003	141515021	141619003	-	transcript3250.chr5.nic@DIAPH1	transcript3250.chr5.nic	protein_coding	141618798,141588224,141587042,141584124,141583485,141583206,141582312,141580744,141579088,141578515,141578225,141577475,141576756,141576230,141574967,141573492,141571926,141550499,141534335,141529603,141529172,141528702,141528453,141527573,141526297,141526038,141524143,141518944,141515021	141619003,141588250,141587197,141584225,141583615,141583292,141582375,141580883,141579196,141578625,141578343,141577591,141576871,141576294,141575146,141574208,141572040,141550507,141534433,141529697,141529273,141528941,141528582,141527697,141526461,141526173,141524229,141518996,141517008	Gene ID= ENSG00000131504.15 TPM= 123.08 Transcript Type= NA
chr5	141515022	141619055	141515022	141619055	-	ENST00000253811.10@DIAPH1	ENST00000253811.10	protein_coding	141618798,141588224,141587042,141584124,141583485,141583206,141582312,141580744,141579088,141578515,141578225,141577475,141576756,141576230,141574967,141573492,141571926,141550499,141534335,141529603,141529172,141528702,141528453,141527571,141526297,141526038,141524143,141515022	141619055,141588250,141587197,141584225,141583615,141583292,141582375,141580883,141579196,141578625,141578343,141577591,141576871,141576294,141575146,141574208,141572040,141550507,141534433,141529697,141529273,141528941,141528582,141527697,141526459,141526173,141524229,141517008	Gene ID= ENSG00000131504.15 TPM= 57.92 Transcript Type= protein_coding
chr5	141620876	141636870	141620876	141636870	-	ENST00000305264.7@HDAC3	ENST00000305264.7	protein_coding	141636736,141636548,141634811,141630044,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141625208,141620876	141636870,141636630,141634953,141630125,141629916,141629739,141629306,141628639,141628187,141627957,141626283,141626071,141625764,141625365,141621537	Gene ID= ENSG00000171720.9 TPM= 105.87 Transcript Type= protein_coding
chr5	141624862	141636872	141624862	141636872	-	transcript3269.chr5.nic@HDAC3	transcript3269.chr5.nic	protein_coding	141636736,141636548,141634811,141630044,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141624862	141636872,141636630,141634953,141630125,141629916,141629739,141629306,141628639,141628187,141627957,141626283,141626071,141625764,141625365	Gene ID= ENSG00000171720.9 TPM= 4.83 Transcript Type= NA
chr5	141636950	141641063	141636950	141641063	+	ENST00000444782.5@RELL2	ENST00000444782.5	protein_coding	141636950,141638170,141638795,141638955,141639464,141639920,141640412,141640671	141637741,141638409,141638860,141639021,141639649,141640295,141640445,141641063	Gene ID= ENSG00000164620.8 TPM= 1.93 Transcript Type= protein_coding
chr5	141862652	141878410	141862652	141878410	-	ENST00000394536.4@PCDH1	ENST00000394536.4	protein_coding	141878223,141868569,141862652	141878410,141869431,141865427	Gene ID= ENSG00000156453.13 TPM= 5.79 Transcript Type= protein_coding
chr5	141923820	141940146	141923820	141940146	+	transcript3286.chr5.nnic@KIAA0141	transcript3286.chr5.nnic	protein_coding	141923820,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141938852,141939506	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141938904,141940146	Gene ID= ENSG00000081791.8 TPM= 4.1 Transcript Type= NA
chr5	141923820	141940152	141923820	141940152	+	transcript3288.chr5.nnic@KIAA0141	transcript3288.chr5.nnic	protein_coding	141923820,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141939506	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141940152	Gene ID= ENSG00000081791.8 TPM= 11.83 Transcript Type= NA
chr5	141923808	141942047	141923808	141942047	+	ENST00000432126.6@KIAA0141	ENST00000432126.6	protein_coding	141923808,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141942047	Gene ID= ENSG00000081791.8 TPM= 1.21 Transcript Type= protein_coding
chr5	141923820	141935470	141923820	141935470	+	transcript3292.chr5.nic@KIAA0141	transcript3292.chr5.nic	protein_coding	141923820,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141935470	Gene ID= ENSG00000081791.8 TPM= 4.1 Transcript Type= NA
chr5	141934240	141940146	141934240	141940146	+	ENST00000507481.2@KIAA0141	ENST00000507481.2	protein_coding	141934240,141934494,141937198,141938521,141938856,141939506	141934398,141934586,141937357,141938760,141938904,141940146	Gene ID= ENSG00000081791.8 TPM= 1.93 Transcript Type= protein_coding
chr5	141943585	141959062	141943585	141959062	-	ENST00000231484.3@PCDH12	ENST00000231484.3	protein_coding	141954972,141951493,141949432,141943585	141959062,141951590,141949583,141945805	Gene ID= ENSG00000113555.5 TPM= 3.86 Transcript Type= protein_coding
chr5	141969039	141990291	141969039	141990291	+	ENST00000394520.6@RNF14	ENST00000394520.6	protein_coding	141969039,141970704,141973583,141974804,141978303,141980123,141983380,141984803,141987733	141969167,141970877,141973742,141974955,141978830,141980351,141983552,141984933,141990291	Gene ID= ENSG00000013561.17 TPM= 3.86 Transcript Type= protein_coding
chr5	141969161	141989185	141969161	141989185	+	transcript3303.chr5.nic@RNF14	transcript3303.chr5.nic	protein_coding	141969161,141970704,141973583,141974804,141978303,141980123,141983380,141984803,141987733	141969234,141970877,141973742,141974955,141978830,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 9.65 Transcript Type= NA
chr5	141968886	141990290	141968886	141990290	+	ENST00000347642.7@RNF14	ENST00000347642.7	protein_coding	141968886,141973583,141974804,141978303,141980123,141983380,141984803,141987733	141969167,141973742,141974955,141978830,141980351,141983552,141984933,141990290	Gene ID= ENSG00000013561.17 TPM= 13.51 Transcript Type= protein_coding
chr5	141969039	141989185	141969039	141989185	+	transcript3312.chr5.nic@RNF14	transcript3312.chr5.nic	protein_coding	141969039,141973583,141978303,141980123,141983380,141984803,141987733	141969167,141973742,141978830,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 5.79 Transcript Type= NA
chr5	141969039	141989185	141969039	141989185	+	transcript3319.chr5.nic@RNF14	transcript3319.chr5.nic	protein_coding	141969039,141973583,141980123,141983380,141984803,141987733	141969167,141973742,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 3.86 Transcript Type= NA
chr5	141969106	141989185	141969106	141989185	+	transcript3325.chr5.nic@RNF14	transcript3325.chr5.nic	protein_coding	141969106,141973583,141983380,141984803,141987733	141969167,141973742,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 1.93 Transcript Type= NA
chr5	141969111	141989185	141969111	141989185	+	ENST00000394514.6@RNF14	ENST00000394514.6	protein_coding	141969111,141970704,141973583,141978303,141980123,141983380,141984803,141987733	141969167,141970877,141973742,141978830,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 13.51 Transcript Type= protein_coding
chr5	142000674	142013030	142000674	142013030	-	ENST00000500692.6@GNPDA1	ENST00000500692.6	protein_coding	142012995,142012288,142011912,142007799,142006144,142004932,142003088,142000674	142013030,142012339,142012041,142007900,142006326,142005116,142003262,142002129	Gene ID= ENSG00000113552.15 TPM= 3.38 Transcript Type= protein_coding
chr5	142000669	142013031	142000669	142013031	-	ENST00000311337.10@GNPDA1	ENST00000311337.10	protein_coding	142012995,142011912,142007799,142006144,142004932,142003088,142000669	142013031,142012041,142007900,142006326,142005116,142003262,142002129	Gene ID= ENSG00000113552.15 TPM= 34.27 Transcript Type= protein_coding
chr5	142108505	142154443	142108505	142154443	+	ENST00000253814.5@NDFIP1	ENST00000253814.5	protein_coding	142108505,142131808,142132212,142135730,142137734,142140563,142144571,142151731	142109037,142131895,142132342,142135817,142137858,142140629,142144676,142154443	Gene ID= ENSG00000131507.10 TPM= 52.13 Transcript Type= protein_coding
chr5	143226255	143228687	143226255	143228687	+	transcript3352.chr5.nnic@NA	transcript3352.chr5.nnic	NA	143226255	143228687	Gene ID= novel_gene_chr5_3353 TPM= 3.86 Transcript Type= NA
chr5	143281120	143403000	143281120	143403000	-	transcript3354.chr5.nic@NR3C1	transcript3354.chr5.nic	protein_coding	143402602,143399656,143314002,143310097,143300485,143298668,143295460,143282568,143281120	143403000,143400852,143314168,143310213,143300763,143298812,143295590,143282725,143282041	Gene ID= ENSG00000113580.14 TPM= 4.83 Transcript Type= NA
chr5	143310097	143404313	143310097	143404313	-	transcript3359.chr5.nic@NR3C1	transcript3359.chr5.nic	protein_coding	143403211,143399656,143314002,143310097	143404313,143400852,143314168,143310213	Gene ID= ENSG00000113580.14 TPM= 106.67 Transcript Type= NA
chr5	143281811	143404544	143281811	143404544	-	ENST00000503201.1@NR3C1	ENST00000503201.1	protein_coding	143404376,143399656,143314002,143310097,143300485,143298668,143295460,143282568,143281811	143404544,143400852,143314168,143310213,143300763,143298812,143295590,143282725,143282041	Gene ID= ENSG00000113580.14 TPM= 1.93 Transcript Type= protein_coding
chr5	143398357	143403722	143398357	143403722	-	transcript3364.chr5.nic@NR3C1	transcript3364.chr5.nic	protein_coding	143403211,143398357	143403722,143400852	Gene ID= ENSG00000113580.14 TPM= 11.58 Transcript Type= NA
chr5	143281162	143403689	143281162	143403689	-	ENST00000231509.7@NR3C1	ENST00000231509.7	protein_coding	143403211,143399656,143313999,143310097,143300485,143298668,143295460,143282568,143281162	143403689,143400852,143314168,143310213,143300763,143298812,143295590,143282725,143282041	Gene ID= ENSG00000113580.14 TPM= 52.61 Transcript Type= protein_coding
chr5	144158159	144170659	144158159	144170659	-	ENST00000274496.9@YIPF5	ENST00000274496.9	protein_coding	144170535,144169846,144165432,144164111,144162218,144158159	144170659,144169965,144165604,144164256,144162399,144160559	Gene ID= ENSG00000145817.16 TPM= 7.72 Transcript Type= protein_coding
chr5	145936579	146063316	145936579	146063316	+	ENST00000359120.8@SH3RF2	ENST00000359120.8	protein_coding	145936579,145937823,146000058,146004058,146013747,146047772,146049075,146055981,146059866,146062426	145936694,145938306,146000327,146004153,146014061,146047863,146049245,146056213,146060224,146063316	Gene ID= ENSG00000156463.17 TPM= 42.47 Transcript Type= protein_coding
chr5	145937695	146063294	145937695	146063294	+	transcript3385.chr5.nnic@SH3RF2	transcript3385.chr5.nnic	protein_coding	145937695,146000058,146004058,146013747,146047772,146049075,146055981,146062426	145938306,146000327,146004153,146014061,146047863,146049245,146056213,146063294	Gene ID= ENSG00000156463.17 TPM= 6.76 Transcript Type= NA
chr5	146149158	146182681	146149158	146182681	-	transcript3412.chr5.nic@LARS	transcript3412.chr5.nic	protein_coding	146182488,146177547,146172687,146171910,146168128,146164310,146160374,146159407,146157728,146157403,146153893,146153734,146153174,146151862,146149158	146182681,146177665,146172774,146171990,146168265,146164471,146160486,146159470,146157795,146157628,146153980,146153810,146153227,146152002,146149699	Gene ID= ENSG00000133706.17 TPM= 3.86 Transcript Type= NA
chr5	146113038	146182660	146113038	146182660	-	ENST00000394434.6@LARS	ENST00000394434.6	protein_coding	146182488,146177547,146172687,146171910,146168128,146164310,146160374,146159407,146157728,146157403,146153893,146153734,146153174,146151862,146149622,146144624,146144472,146144267,146143412,146142872,146140204,146135601,146132898,146131019,146130018,146128978,146128672,146126435,146123982,146122492,146120371,146113038	146182660,146177665,146172774,146171990,146168265,146164471,146160486,146159470,146157795,146157628,146153980,146153810,146153227,146152002,146149699,146144709,146144537,146144349,146143550,146143084,146140261,146135664,146133081,146131109,146130158,146129118,146128782,146126545,146124086,146122587,146120503,146114311	Gene ID= ENSG00000133706.17 TPM= 41.03 Transcript Type= protein_coding
chr5	146148601	146150641	146148601	146150641	+	transcript3419.chr5.nnic@NA	transcript3419.chr5.nnic	NA	146148601	146150641	Gene ID= novel_gene_chr5_3420 TPM= 2.9 Transcript Type= NA
chr5	146203550	146339251	146203550	146339251	+	ENST00000506502.2@AC091959.3	ENST00000506502.2	protein_coding	146203550,146218985,146223403,146228946,146229717,146230657,146233450,146237298,146254943,146258449,146260745,146261510,146263491,146267649,146269207,146269420,146270954,146271483,146314896,146339103	146203824,146219103,146223527,146229037,146229910,146230917,146233743,146237432,146255092,146258593,146260898,146261806,146263631,146267768,146269281,146269584,146271058,146271674,146315018,146339251	Gene ID= ENSG00000275740.1 TPM= 1.28 Transcript Type= protein_coding
chr5	146203560	146269451	146203560	146269451	+	transcript3423.chr5.nic@RBM27	transcript3423.chr5.nic	protein_coding	146203560,146218985,146223403,146228946,146229717,146230657,146233450,146237298,146251711,146254943,146258449,146260745,146261510,146263491,146267649,146269207,146269420	146203824,146219103,146223527,146229037,146229910,146230917,146233743,146237432,146251875,146255092,146258593,146260898,146261806,146263631,146267768,146269281,146269451	Gene ID= ENSG00000091009.7 TPM= 3.21 Transcript Type= NA
chr5	146447312	146511961	146447312	146511961	+	ENST00000296702.9@TCERG1	ENST00000296702.9	protein_coding	146447312,146455056,146457183,146458884,146463551,146468341,146469544,146470636,146471488,146478493,146479855,146480028,146482592,146483540,146492920,146498536,146503375,146503824,146507028,146507873,146509145,146510441	146447408,146455281,146457335,146459337,146463793,146468403,146469744,146470748,146471576,146478653,146479911,146480094,146482727,146483629,146493038,146498686,146503539,146504006,146507207,146507956,146509245,146511961	Gene ID= ENSG00000113649.11 TPM= 4.34 Transcript Type= protein_coding
chr5	146447311	146480216	146447311	146480216	+	ENST00000507175.5@TCERG1	ENST00000507175.5	protein_coding	146447311,146455056,146457183,146458884,146463551,146469544,146470636,146471488,146478493,146479855,146480028	146447408,146455281,146457335,146459337,146463793,146469744,146470748,146471576,146478653,146479911,146480216	Gene ID= ENSG00000113649.11 TPM= 13.03 Transcript Type= retained_intron
chr5	147390811	147453959	147390811	147453959	-	ENST00000398514.7@DPYSL3	ENST00000398514.7	protein_coding	147453549,147424875,147418447,147415709,147413596,147412608,147408728,147405610,147401540,147400692,147399082,147397666,147395559,147390811	147453959,147424963,147418631,147415873,147413657,147412688,147408796,147405730,147401696,147400833,147399252,147397845,147395721,147394123	Gene ID= ENSG00000113657.12 TPM= 13.51 Transcript Type= protein_coding
chr5	148383935	148442836	148383935	148442836	+	ENST00000340253.9@FBXO38	ENST00000340253.9	protein_coding	148383935,148394714,148398999,148401982,148402348,148404685,148406257,148409124,148410635,148414136,148415928,148416994,148423998,148425522,148427213,148433424,148433635,148438332,148439647,148440424,148441124,148441969	148384039,148394904,148399132,148402145,148402513,148404822,148406394,148409217,148410765,148414306,148416070,148417204,148424117,148425701,148427947,148433524,148433737,148438498,148439792,148440527,148441237,148442836	Gene ID= ENSG00000145868.16 TPM= 10.14 Transcript Type= protein_coding
chr5	148383935	148442827	148383935	148442827	+	ENST00000296701.10@FBXO38	ENST00000296701.10	protein_coding	148383935,148394714,148398999,148401982,148402348,148404685,148406257,148409124,148410635,148414136,148415928,148416994,148423998,148425522,148433424,148433635,148438332,148439647,148440424,148441124,148441969	148384039,148394904,148399132,148402145,148402513,148404822,148406394,148409217,148410765,148414306,148416070,148417204,148424117,148425701,148433524,148433737,148438498,148439792,148440527,148441237,148442827	Gene ID= ENSG00000145868.16 TPM= 1.45 Transcript Type= protein_coding
chr5	148826624	148970641	148826624	148970641	+	transcript3449.chr5.nnic@ADRB2	transcript3449.chr5.nnic	protein_coding	148826624,148960917,148967350,148970010	148828005,148961018,148967419,148970641	Gene ID= ENSG00000169252.5 TPM= 2.41 Transcript Type= NA
chr5	148826609	148877431	148826609	148877431	+	transcript3451.chr5.nnic@ADRB2	transcript3451.chr5.nnic	protein_coding	148826609,148872504,148874512	148828005,148872589,148877431	Gene ID= ENSG00000169252.5 TPM= 2.9 Transcript Type= NA
chr5	148826632	148864084	148826632	148864084	+	transcript3452.chr5.nnic@ADRB2	transcript3452.chr5.nnic	protein_coding	148826632,148863697	148828005,148864084	Gene ID= ENSG00000169252.5 TPM= 2.41 Transcript Type= NA
chr5	149141483	149260542	149141483	149260542	+	ENST00000326685.11@ABLIM3	ENST00000326685.11	protein_coding	149141483,149142009,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149239759,149242491,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291	149141654,149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149239888,149242538,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260542	Gene ID= ENSG00000173210.19 TPM= 1.28 Transcript Type= protein_coding
chr5	149141493	149260439	149141493	149260439	+	transcript3460.chr5.nic@ABLIM3	transcript3460.chr5.nic	protein_coding	149141493,149142009,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149239759,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291	149141654,149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149239888,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260439	Gene ID= ENSG00000173210.19 TPM= 7.08 Transcript Type= NA
chr5	149141503	149260439	149141503	149260439	+	ENST00000309868.11@ABLIM3	ENST00000309868.11	protein_coding	149141503,149142009,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149237448,149239248,149239759,149240676,149242491,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291	149141654,149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149237603,149239277,149239888,149240774,149242538,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260439	Gene ID= ENSG00000173210.19 TPM= 3.21 Transcript Type= protein_coding
chr5	149271871	149341802	149271871	149341802	+	ENST00000296721.8@AFAP1L1	ENST00000296721.8	protein_coding	149271871,149299509,149300271,149301133,149302418,149306306,149307402,149309956,149312112,149315821,149316151,149317729,149319582,149320391,149322606,149329666,149332695,149335594,149340007	149271984,149299637,149300354,149301230,149302526,149306404,149307613,149310135,149312204,149315914,149316303,149317940,149319727,149320463,149322717,149329830,149332873,149335722,149341802	Gene ID= ENSG00000157510.13 TPM= 40.86 Transcript Type= protein_coding
chr5	149271871	149312375	149271871	149312375	+	ENST00000455574.6@AFAP1L1	ENST00000455574.6	protein_coding	149271871,149299509,149300271,149301133,149302418,149306306,149307402,149309956,149312112	149271984,149299637,149300354,149301230,149302526,149306404,149307613,149310135,149312375	Gene ID= ENSG00000157510.13 TPM= 4.18 Transcript Type= retained_intron
chr5	149345430	149354583	149345430	149354583	+	ENST00000329271.7@GRPEL2	ENST00000329271.7	protein_coding	149345430,149348272,149349654,149350918	149345616,149348425,149349735,149354583	Gene ID= ENSG00000164284.14 TPM= 5.79 Transcript Type= protein_coding
chr5	149494314	149551477	149494314	149551477	-	transcript3507.chr5.nic@CSNK1A1	transcript3507.chr5.nic	protein_coding	149550842,149550075,149525045,149520290,149517794,149513070,149511794,149509879,149507027,149505483,149494314	149551477,149550181,149525171,149520388,149517877,149513209,149511872,149509953,149507133,149505595,149496860	Gene ID= ENSG00000113712.17 TPM= 41.22 Transcript Type= NA
chr5	149529183	149530976	149529183	149530976	+	transcript3541.chr5.nnic@NA	transcript3541.chr5.nnic	NA	149529183	149530976	Gene ID= novel_gene_chr5_3542 TPM= 2.9 Transcript Type= NA
chr5	149581346	149634968	149581346	149634968	+	transcript3544.chr5.nnic@ARHGEF37	transcript3544.chr5.nnic	protein_coding	149581346,149589526,149597759,149601108,149609548,149616567,149618176,149618938,149620354,149621733,149624012,149627076,149628809,149631982	149581624,149589642,149597955,149601231,149609695,149616766,149618306,149619042,149620464,149622062,149624140,149627271,149628966,149634968	Gene ID= ENSG00000183111.11 TPM= 3.86 Transcript Type= NA
chr5	149581346	149634968	149581346	149634968	+	transcript3546.chr5.nnic@ARHGEF37	transcript3546.chr5.nnic	protein_coding	149581346,149589526,149601108,149609548,149616567,149618176,149618938,149620354,149621733,149624012,149627076,149628809,149631982	149581624,149589642,149601231,149609695,149616766,149618306,149619042,149620464,149622062,149624140,149627271,149628966,149634968	Gene ID= ENSG00000183111.11 TPM= 5.79 Transcript Type= NA
chr5	149581353	149634968	149581353	149634968	+	transcript3549.chr5.nnic@ARHGEF37	transcript3549.chr5.nnic	protein_coding	149581353,149601108,149609548,149616567,149618176,149618938,149620354,149621733,149624012,149627076,149628809,149631982	149581624,149601231,149609695,149616766,149618306,149619042,149620464,149622062,149624140,149627271,149628966,149634968	Gene ID= ENSG00000183111.11 TPM= 3.86 Transcript Type= NA
chr5	149581332	149624809	149581332	149624809	+	transcript3550.chr5.nic@ARHGEF37	transcript3550.chr5.nic	protein_coding	149581332,149597759,149601108,149609548,149616567,149618176,149618938,149620354,149621733,149624012	149581624,149597955,149601231,149609695,149616766,149618306,149619042,149620464,149622062,149624809	Gene ID= ENSG00000183111.11 TPM= 1.93 Transcript Type= NA
chr5	149581473	149634968	149581473	149634968	+	ENST00000333677.6@ARHGEF37	ENST00000333677.6	protein_coding	149581473,149597759,149601108,149609548,149616567,149618176,149618938,149620354,149621733,149624012,149627076,149628809,149631982	149581624,149597955,149601231,149609695,149616766,149618306,149619042,149620464,149622062,149624140,149627271,149628966,149634968	Gene ID= ENSG00000183111.11 TPM= 24.13 Transcript Type= protein_coding
chr5	149960737	149987405	149960737	149987405	+	ENST00000286298.4@SLC26A2	ENST00000286298.4	protein_coding	149960737,149977628,149980293	149960979,149978351,149987405	Gene ID= ENSG00000155850.7 TPM= 12.55 Transcript Type= protein_coding
chr5	150000046	150053142	150000046	150053142	+	ENST00000613459.4@HMGXB3	ENST00000613459.4	protein_coding	150000046,150000454,150004851,150006473,150010111,150012255,150018566,150024262,150026706,150027020,150030741,150032454,150036636,150037400,150040748,150041785,150045466,150047624,150048569,150050252,150051725	150000055,150001179,150004989,150006647,150010608,150012353,150018697,150024680,150026881,150027117,150030839,150032603,150036937,150037527,150040879,150041969,150045685,150047757,150048685,150050461,150053142	Gene ID= ENSG00000113716.12 TPM= 34.27 Transcript Type= protein_coding
chr5	150000700	150053142	150000700	150053142	+	transcript3562.chr5.nnic@HMGXB3	transcript3562.chr5.nnic	protein_coding	150000700,150004851,150006473,150012255,150018566,150024262,150026706,150027020,150030741,150032454,150036636,150037400,150040748,150041785,150045466,150047624,150048569,150050252,150051725	150001179,150004989,150006647,150012353,150018697,150024680,150026881,150027117,150030839,150032603,150036937,150037527,150040879,150041969,150045685,150047757,150048685,150050461,150053142	Gene ID= ENSG00000113716.12 TPM= 9.17 Transcript Type= NA
chr5	150053291	150113372	150053291	150113372	-	ENST00000286301.7@CSF1R	ENST00000286301.7	protein_coding	150113261,150086379,150080767,150080052,150078112,150077276,150073301,150070456,150070182,150069873,150068215,150061723,150061491,150060862,150059700,150057504,150057287,150056219,150056026,150055237,150054322,150053291	150113372,150086607,150081024,150080336,150078248,150077435,150073493,150070571,150070302,150070063,150068330,150061849,150061595,150060972,150059862,150057592,150057384,150056341,150056137,150055336,150054430,150054224	Gene ID= ENSG00000182578.13 TPM= 4.83 Transcript Type= protein_coding
chr5	150113837	150155860	150113837	150155860	-	ENST00000261799.8@PDGFRB	ENST00000261799.8	protein_coding	150155397,150137008,150135555,150134750,150133881,150133586,150132750,150131979,150130539,150129757,150126520,150125445,150124727,150124250,150123042,150121880,150121204,150120888,150120012,150119467,150118747,150117618,150113837	150155860,150137053,150135878,150135016,150134008,150133760,150132942,150132094,150130662,150129968,150126614,150125577,150124831,150124360,150123201,150122040,150121322,150121010,150120123,150119566,150118852,150117850,150115946	Gene ID= ENSG00000113721.13 TPM= 53.09 Transcript Type= protein_coding
chr5	150221098	150245574	150221098	150245574	-	transcript3576.chr5.nic@CAMK2A	transcript3576.chr5.nic	protein_coding	150245161,150239704,150238700,150231305,150228192,150222989,150221098	150245574,150239736,150238748,150231380,150228286,150223217,150222713	Gene ID= ENSG00000070808.15 TPM= 9.65 Transcript Type= NA
chr5	150357639	150400307	150357639	150400307	+	ENST00000377797.7@TCOF1	ENST00000377797.7	protein_coding	150357639,150361156,150364113,150367844,150368716,150369529,150372006,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391544,150391957,150392708,150393372,150396282,150398354,150399022,150399810	150357854,150361211,150364252,150367917,150368902,150369602,150372236,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150391657,150392176,150392790,150393552,150396842,150398451,150399070,150400307	Gene ID= ENSG00000070814.17 TPM= 4.83 Transcript Type= protein_coding
chr5	150357698	150396843	150357698	150396843	+	transcript3587.chr5.nic@TCOF1	transcript3587.chr5.nic	protein_coding	150357698,150361156,150364113,150367844,150368716,150369529,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391544,150391957,150392705,150393372,150396282	150357854,150361211,150364252,150367917,150368902,150369602,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150391657,150392176,150392790,150393552,150396843	Gene ID= ENSG00000070814.17 TPM= 7.72 Transcript Type= NA
chr5	150357637	150396843	150357637	150396843	+	transcript3590.chr5.nic@TCOF1	transcript3590.chr5.nic	protein_coding	150357637,150361156,150364113,150367844,150368716,150369529,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391957,150392705,150393372,150396282	150357854,150361211,150364252,150367917,150368902,150369602,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150392176,150392790,150393552,150396843	Gene ID= ENSG00000070814.17 TPM= 3.86 Transcript Type= NA
chr5	150357719	150398369	150357719	150398369	+	ENST00000427724.6@TCOF1	ENST00000427724.6	protein_coding	150357719,150361156,150364113,150367844,150368716,150369529,150372006,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391957,150392708,150393372,150396282,150398354	150357854,150361211,150364252,150367917,150368902,150369602,150372236,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150392176,150392790,150393552,150396842,150398369	Gene ID= ENSG00000070814.17 TPM= 2.9 Transcript Type= protein_coding
chr5	150401670	150412929	150401670	150412929	-	ENST00000353334.10@CD74	ENST00000353334.10	protein_coding	150412625,150407152,150406881,150406259,150405085,150404680,150402563,150401670	150412929,150407324,150406960,150406321,150405180,150404767,150402625,150402250	Gene ID= ENSG00000019582.14 TPM= 127.42 Transcript Type= protein_coding
chr5	150444231	150449756	150444231	150449756	-	ENST00000407193.5@RPS14	ENST00000407193.5	protein_coding	150449486,150447585,150446802,150445609,150444231	150449756,150447735,150446963,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 38.45 Transcript Type= protein_coding
chr5	150443190	150449747	150443190	150449747	-	ENST00000401695.7@RPS14	ENST00000401695.7	protein_coding	150449703,150447585,150446802,150445609,150443190	150449747,150447735,150446963,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 4.66 Transcript Type= protein_coding
chr5	150444238	150449696	150444238	150449696	-	ENST00000312037.5@RPS14	ENST00000312037.5	protein_coding	150449492,150447585,150446802,150445609,150444238	150449696,150447735,150446963,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 69.34 Transcript Type= protein_coding
chr5	150624597	150652337	150624597	150652337	+	transcript3622.chr5.nnic@SYNPO	transcript3622.chr5.nnic	protein_coding	150624597,150647944	150624907,150652337	Gene ID= ENSG00000171992.12 TPM= 1615.93 Transcript Type= NA
chr5	150650053	150652337	150650053	150652337	+	transcript3624.chr5.nnic@SYNPO	transcript3624.chr5.nnic	protein_coding	150650053,150651054	150651011,150652337	Gene ID= ENSG00000171992.12 TPM= 289.59 Transcript Type= NA
chr5	150624870	150627557	150624870	150627557	+	transcript3625.chr5.nnic@NA	transcript3625.chr5.nnic	NA	150624870	150627557	Gene ID= novel_gene_chr5_3626 TPM= 1.93 Transcript Type= NA
chr5	150628704	150633967	150628704	150633967	+	transcript3627.chr5.nnic@NA	transcript3627.chr5.nnic	NA	150628704	150633967	Gene ID= novel_gene_chr5_3628 TPM= 2.9 Transcript Type= NA
chr5	150660882	150679365	150660882	150679365	+	ENST00000297130.4@MYOZ3	ENST00000297130.4	protein_coding	150660882,150662941,150670484,150671597,150671755,150672340,150676707	150661079,150663002,150670638,150671650,150671908,150672502,150679365	Gene ID= ENSG00000164591.13 TPM= 16.41 Transcript Type= protein_coding
chr5	150690794	150701107	150690794	150701107	-	ENST00000199814.8@RBM22	ENST00000199814.8	protein_coding	150700932,150700444,150699242,150698499,150696791,150696533,150695506,150694076,150693219,150692895,150690794	150701107,150700497,150699271,150698631,150696891,150696705,150695706,150694240,150693307,150693026,150691881	Gene ID= ENSG00000086589.11 TPM= 23.65 Transcript Type= protein_coding
chr5	150690794	150701097	150690794	150701097	-	transcript3645.chr5.nic@RBM22	transcript3645.chr5.nic	protein_coding	150700932,150700444,150699242,150698499,150696791,150696533,150694076,150693219,150692895,150690794	150701097,150700497,150699271,150698631,150696891,150696705,150695706,150693307,150693026,150691881	Gene ID= ENSG00000086589.11 TPM= 7.24 Transcript Type= NA
chr5	150708440	150759109	150708440	150759109	-	ENST00000447998.6@DCTN4	ENST00000447998.6	protein_coding	150758859,150756417,150753479,150742114,150733368,150731416,150731044,150730631,150722907,150719716,150718276,150715565,150708440	150759109,150756487,150753657,150742157,150733475,150731489,150731156,150730740,150722980,150719770,150718383,150715662,150711362	Gene ID= ENSG00000132912.12 TPM= 1.93 Transcript Type= protein_coding
chr5	150777946	150796734	150777946	150796734	+	ENST00000526627.1@SMIM3	ENST00000526627.1	protein_coding	150777946,150795430	150778972,150796734	Gene ID= ENSG00000256235.1 TPM= 19.31 Transcript Type= protein_coding
chr5	150930643	150946546	150930643	150946546	-	transcript3655.chr5.nnic@ZNF300P1	transcript3655.chr5.nnic	transcribed_unprocessed_pseudogene	150946306,150943814,150942550,150942218,150930643	150946546,150943872,150942676,150942313,150932294	Gene ID= ENSG00000197083.11 TPM= 1.93 Transcript Type= NA
chr5	151020438	151028992	151020438	151028992	+	ENST00000622181.4@GPX3	ENST00000622181.4	protein_coding	151020438,151025340,151025472,151026900,151027432,151027909	151020741,151025468,151025493,151027017,151027531,151028992	Gene ID= ENSG00000211445.11 TPM= 14.82 Transcript Type= protein_coding
chr5	151020563	151028993	151020563	151028993	+	ENST00000388825.8@GPX3	ENST00000388825.8	protein_coding	151020563,151025340,151026900,151027432,151027909	151020741,151025493,151027017,151027531,151028993	Gene ID= ENSG00000211445.11 TPM= 838.15 Transcript Type= protein_coding
chr5	151020589	151028987	151020589	151028987	+	ENST00000614343.4@GPX3	ENST00000614343.4	protein_coding	151020589,151025340,151026900,151027432,151027909,151028903	151020741,151025493,151027017,151027531,151028776,151028987	Gene ID= ENSG00000211445.11 TPM= 29.99 Transcript Type= protein_coding
chr5	151029949	151081073	151029949	151081073	-	transcript3672.chr5.nnic@TNIP1	transcript3672.chr5.nnic	protein_coding	151080880,151064960,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151033608,151032287,151029949	151081073,151065131,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151033799,151033086,151030747	Gene ID= ENSG00000145901.14 TPM= 6.12 Transcript Type= NA
chr5	151029947	151081084	151029947	151081084	-	ENST00000389378.6@TNIP1	ENST00000389378.6	protein_coding	151080880,151064960,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151033608,151032287,151029947	151081084,151065131,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151033799,151032400,151030747	Gene ID= ENSG00000145901.14 TPM= 70.8 Transcript Type= protein_coding
chr5	151029945	151081016	151029945	151081016	-	ENST00000520931.5@TNIP1	ENST00000520931.5	protein_coding	151080880,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151033608,151032287,151029945	151081016,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151033799,151032383,151030747	Gene ID= ENSG00000145901.14 TPM= 25.59 Transcript Type= protein_coding
chr5	151101105	151157882	151101105	151157882	-	ENST00000354546.9@ANXA6	ENST00000354546.9	protein_coding	151157680,151147884,151140153,151139353,151138678,151137231,151136256,151134427,151133094,151132476,151131231,151129407,151128181,151126402,151124286,151122917,151122147,151119300,151117758,151117127,151110627,151109753,151108455,151105245,151103570,151101105	151157882,151147926,151140243,151139447,151138791,151137321,151136335,151134483,151133187,151132571,151131289,151129529,151128239,151126480,151124367,151123011,151122260,151119390,151117837,151117180,151110644,151109846,151108550,151105303,151103692,151101507	Gene ID= ENSG00000197043.13 TPM= 256.77 Transcript Type= protein_coding
chr5	151181052	151224145	151181052	151224145	-	ENST00000355417.6@CCDC69	ENST00000355417.6	protein_coding	151223923,151205400,151201582,151198997,151187386,151186023,151185422,151184344,151181052	151224145,151205475,151201688,151199084,151187459,151186124,151185541,151184441,151183614	Gene ID= ENSG00000198624.12 TPM= 72.4 Transcript Type= protein_coding
chr5	151181052	151224093	151181052	151224093	-	ENST00000521308.5@CCDC69	ENST00000521308.5	protein_coding	151223923,151201582,151198997,151187386,151186023,151185422,151184344,151181052	151224093,151201688,151199084,151187459,151186124,151185541,151184441,151183614	Gene ID= ENSG00000198624.12 TPM= 13.51 Transcript Type= processed_transcript
chr5	151181393	151205477	151181393	151205477	-	ENST00000518189.5@CCDC69	ENST00000518189.5	protein_coding	151205400,151201582,151198997,151187386,151186023,151185447,151184344,151181393	151205477,151201688,151199084,151187459,151186124,151185541,151184441,151183614	Gene ID= ENSG00000198624.12 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr5	151252892	151270440	151252892	151270440	+	ENST00000357164.3@GM2A	ENST00000357164.3	protein_coding	151252892,151259755,151266731,151267296	151253297,151259916,151266913,151270440	Gene ID= ENSG00000196743.8 TPM= 4.83 Transcript Type= protein_coding
chr5	151268418	151272759	151268418	151272759	+	transcript3733.chr5.nnic@NA	transcript3733.chr5.nnic	NA	151268418	151272759	Gene ID= novel_gene_chr5_3734 TPM= 1.93 Transcript Type= NA
chr5	151318835	151347602	151318835	151347602	-	transcript3737.chr5.nnic@SLC36A2	transcript3737.chr5.nnic	protein_coding	151347297,151344177,151343510,151342888,151339060,151335329,151333224,151325286,151322046,151318835	151347602,151344267,151343598,151342983,151339144,151335547,151333322,151325452,151322215,151319114	Gene ID= ENSG00000186335.8 TPM= 3.86 Transcript Type= NA
chr5	151332965	151347602	151332965	151347602	-	transcript3739.chr5.nic@SLC36A2	transcript3739.chr5.nic	protein_coding	151347297,151344177,151343510,151342888,151339060,151335329,151332965	151347602,151344267,151343598,151342983,151339144,151335547,151333322	Gene ID= ENSG00000186335.8 TPM= 3.86 Transcript Type= NA
chr5	151340517	151347602	151340517	151347602	-	transcript3742.chr5.nnic@SLC36A2	transcript3742.chr5.nnic	protein_coding	151347297,151344177,151343510,151342888,151340517	151347602,151344267,151343598,151342983,151341524	Gene ID= ENSG00000186335.8 TPM= 2.9 Transcript Type= NA
chr5	151661096	151687165	151661096	151687165	-	ENST00000231061.8@SPARC	ENST00000231061.8	protein_coding	151686865,151676132,151674612,151673129,151671573,151669664,151667467,151666361,151664087,151661096	151687165,151676201,151674674,151673216,151671694,151669784,151667600,151666509,151664235,151663599	Gene ID= ENSG00000113140.10 TPM= 32.82 Transcript Type= protein_coding
chr5	151729474	151758631	151729474	151758631	-	transcript3752.chr5.nnic@ATOX1	transcript3752.chr5.nnic	protein_coding	151758546,151751704,151746279,151729474	151758631,151751779,151746449,151730477	Gene ID= ENSG00000177556.11 TPM= 1.93 Transcript Type= NA
chr5	151729474	151758631	151729474	151758631	-	transcript3753.chr5.nnic@ATOX1	transcript3753.chr5.nnic	protein_coding	151758546,151751704,151746279,151729474	151758631,151751779,151746449,151730550	Gene ID= ENSG00000177556.11 TPM= 1.93 Transcript Type= NA
chr5	151742822	151772532	151742822	151772532	-	ENST00000524142.5@ATOX1	ENST00000524142.5	protein_coding	151772403,151758546,151751704,151746279,151742822	151772532,151758779,151751779,151746449,151742959	Gene ID= ENSG00000177556.11 TPM= 18.34 Transcript Type= protein_coding
chr5	151742823	151758649	151742823	151758649	-	ENST00000313115.10@ATOX1	ENST00000313115.10	protein_coding	151758546,151751704,151746279,151742823	151758649,151751779,151746449,151742959	Gene ID= ENSG00000177556.11 TPM= 8.69 Transcript Type= protein_coding
chr5	151771910	151812785	151771910	151812785	+	ENST00000394123.7@G3BP1	ENST00000394123.7	protein_coding	151771910,151786603,151790323,151790889,151794159,151795479,151797227,151799212,151799889,151800218,151800760,151803885	151772036,151786715,151790404,151791062,151794249,151795575,151797428,151799313,151800000,151800346,151800869,151812785	Gene ID= ENSG00000145907.14 TPM= 20.27 Transcript Type= protein_coding
chr5	151771943	151805350	151771943	151805350	+	ENST00000356245.7@G3BP1	ENST00000356245.7	protein_coding	151771943,151786572,151790323,151790889,151794159,151795479,151797227,151799212,151799889,151800218,151800760,151803885	151772036,151786715,151790404,151791062,151794249,151795575,151797428,151799313,151800000,151800346,151800869,151805350	Gene ID= ENSG00000145907.14 TPM= 124.53 Transcript Type= protein_coding
chr5	154445957	154461054	154445957	154461054	+	ENST00000297109.10@SAP30L	ENST00000297109.10	protein_coding	154445957,154451091,154453402,154455900	154446805,154451213,154453500,154461054	Gene ID= ENSG00000164576.11 TPM= 19.31 Transcript Type= protein_coding
chr5	154755820	154792677	154755820	154792677	+	transcript3810.chr5.nic@LARP1	transcript3810.chr5.nic	protein_coding	154755820,154790325,154790645,154792622	154756193,154790386,154790710,154792677	Gene ID= ENSG00000155506.16 TPM= 4.83 Transcript Type= NA
chr5	154818491	154850906	154818491	154850906	-	ENST00000326080.9@FAXDC2	ENST00000326080.9	protein_coding	154850483,154838131,154834843,154834625,154830801,154823387,154822472,154821260,154818491	154850906,154838178,154834934,154834728,154830922,154823592,154822577,154821426,154820472	Gene ID= ENSG00000170271.10 TPM= 1.93 Transcript Type= protein_coding
chr5	154818797	154835081	154818797	154835081	-	transcript3812.chr5.nic@FAXDC2	transcript3812.chr5.nic	protein_coding	154834843,154834625,154830801,154823387,154822472,154821260,154818797	154835081,154834728,154830922,154823592,154822577,154821426,154820472	Gene ID= ENSG00000170271.10 TPM= 1.93 Transcript Type= NA
chr5	154858546	154876793	154858546	154876793	+	ENST00000285896.10@CNOT8	ENST00000285896.10	protein_coding	154858546,154863207,154865192,154870661,154871730,154872541,154875290	154858768,154863395,154865385,154870822,154871874,154872651,154876793	Gene ID= ENSG00000155508.13 TPM= 5.79 Transcript Type= protein_coding
chr5	154858517	154876792	154858517	154876792	+	ENST00000403027.6@CNOT8	ENST00000403027.6	protein_coding	154858517,154863207,154865192,154870661,154871730,154872541,154875290	154858816,154863395,154865385,154870822,154871874,154872651,154876792	Gene ID= ENSG00000155508.13 TPM= 3.86 Transcript Type= protein_coding
chr5	154858252	154876792	154858252	154876792	+	ENST00000517876.5@CNOT8	ENST00000517876.5	protein_coding	154858252,154858639,154863207,154865192,154870661,154871730,154872541,154875290	154858525,154858768,154863395,154865385,154870822,154871874,154872651,154876792	Gene ID= ENSG00000155508.13 TPM= 5.79 Transcript Type= protein_coding
chr5	154887416	154938209	154887416	154938209	-	ENST00000285873.7@GEMIN5	ENST00000285873.7	protein_coding	154937968,154937025,154935841,154932099,154931458,154928527,154927385,154925862,154924469,154921343,154919967,154917931,154916998,154912899,154911727,154907591,154905363,154904507,154903080,154902539,154901339,154899191,154898440,154896092,154892387,154891241,154889321,154887416	154938209,154937185,154936022,154932250,154931577,154928659,154927550,154926074,154924554,154921425,154920103,154918004,154917179,154913038,154911898,154907818,154905476,154904629,154903175,154902676,154901486,154899310,154898650,154896343,154892549,154891742,154889417,154888377	Gene ID= ENSG00000082516.8 TPM= 1.93 Transcript Type= protein_coding
chr5	154941070	154969411	154941070	154969411	+	ENST00000523037.5@MRPL22	ENST00000523037.5	protein_coding	154941070,154941217,154950821,154956371,154957135,154959980,154966686	154941138,154941265,154950938,154956436,154957212,154960049,154969411	Gene ID= ENSG00000082515.17 TPM= 33.79 Transcript Type= protein_coding
chr5	156326757	156759604	156326757	156759604	+	ENST00000337851.8@SGCD	ENST00000337851.8	protein_coding	156326757,156329534,156344489,156508601,156589231,156594932,156647464,156757581,156759217	156327232,156329579,156344677,156508702,156589318,156595051,156647536,156757704,156759604	Gene ID= ENSG00000170624.13 TPM= 6.76 Transcript Type= protein_coding
chr5	156327127	156758055	156327127	156758055	+	transcript3842.chr5.nic@SGCD	transcript3842.chr5.nic	protein_coding	156327127,156329534,156344489,156508601,156589231,156594932,156647464,156757581	156327232,156329579,156344677,156508702,156589318,156595051,156647536,156758055	Gene ID= ENSG00000170624.13 TPM= 3.86 Transcript Type= NA
chr5	156326746	156767788	156326746	156767788	+	ENST00000435422.7@SGCD	ENST00000435422.7	protein_coding	156326746,156344489,156508601,156589231,156594932,156647464,156757581,156759217	156327232,156344677,156508702,156589318,156595051,156647536,156757704,156767788	Gene ID= ENSG00000170624.13 TPM= 3.86 Transcript Type= protein_coding
chr5	157138442	157142775	157138442	157142775	-	ENST00000420343.1@MED7	ENST00000420343.1	protein_coding	157142401,157138442	157142775,157139448	Gene ID= ENSG00000155868.7 TPM= 4.83 Transcript Type= protein_coding
chr5	157266081	157393224	157266081	157393224	+	ENST00000620254.4@CYFIP2	ENST00000620254.4	protein_coding	157266081,157285339,157287019,157294783,157296673,157300715,157302794,157304238,157307761,157309743,157311664,157314344,157314969,157319762,157320655,157323921,157325482,157326171,157327973,157330742,157333327,157339057,157341070,157359005,157360282,157361468,157382590,157383265,157389189,157390521,157392833	157266195,157285478,157287108,157294860,157296774,157300896,157302890,157304366,157307865,157309834,157311781,157314463,157315094,157319928,157320802,157324074,157325638,157326267,157328049,157330850,157333446,157339256,157341157,157359148,157360372,157361598,157382662,157383359,157389427,157390668,157393224	Gene ID= ENSG00000055163.19 TPM= 3.86 Transcript Type= protein_coding
chr5	157786289	157859175	157786289	157859175	-	ENST00000411809.6@CLINT1	ENST00000411809.6	protein_coding	157858930,157817443,157816734,157814185,157813063,157809628,157805866,157803650,157794898,157791703,157789363,157786289	157859175,157817547,157816830,157814293,157813227,157809805,157806112,157803719,157794972,157791995,157789513,157787992	Gene ID= ENSG00000113282.13 TPM= 110.53 Transcript Type= protein_coding
chr5	157786287	157859133	157786287	157859133	-	ENST00000530742.5@CLINT1	ENST00000530742.5	protein_coding	157859040,157817443,157816734,157814185,157813063,157809628,157805866,157803650,157794898,157791703,157789363,157786287	157859133,157817547,157816830,157814293,157813227,157809805,157806112,157803719,157794972,157791995,157789567,157787992	Gene ID= ENSG00000113282.13 TPM= 4.34 Transcript Type= protein_coding
chr5	159157409	159209551	159157409	159209551	-	ENST00000424310.6@RNF145	ENST00000424310.6	protein_coding	159209231,159203434,159194716,159181960,159176632,159173983,159169679,159168873,159162932,159161266,159157409	159209551,159203656,159194824,159182051,159176867,159174158,159169819,159169055,159163079,159161622,159159035	Gene ID= ENSG00000145860.11 TPM= 10.62 Transcript Type= protein_coding
chr5	159263081	159286040	159263081	159286040	+	ENST00000296786.7@UBLCP1	ENST00000296786.7	protein_coding	159263081,159268870,159269908,159270360,159270528,159272023,159274585,159275148,159278238,159283212,159284904	159263360,159269069,159269999,159270445,159270643,159272121,159274622,159275246,159278354,159283339,159286040	Gene ID= ENSG00000164332.7 TPM= 18.34 Transcript Type= protein_coding
chr5	160009156	160010845	160009156	160010845	+	transcript3900.chr5.nic@TTC1	transcript3900.chr5.nic	protein_coding	160009156,160010500	160009193,160010845	Gene ID= ENSG00000113312.10 TPM= 1.93 Transcript Type= NA
chr5	160036506	160065511	160036506	160065511	+	ENST00000522073.5@TTC1	ENST00000522073.5	protein_coding	160036506,160043133,160049514,160051129,160064932	160036803,160043169,160049662,160051183,160065511	Gene ID= ENSG00000113312.10 TPM= 1.93 Transcript Type= retained_intron
chr5	160075882	160119423	160075882	160119423	-	ENST00000456329.7@PWWP2A	ENST00000456329.7	protein_coding	160118805,160093101,160080651,160075882	160119423,160094065,160080770,160078168	Gene ID= ENSG00000170234.12 TPM= 2.9 Transcript Type= protein_coding
chr5	160393148	160400097	160393148	160400097	-	ENST00000408953.3@ZBED8	ENST00000408953.3	protein_coding	160399639,160393148	160400097,160395539	Gene ID= ENSG00000221886.3 TPM= 1.93 Transcript Type= protein_coding
chr5	160401641	160419090	160401641	160419090	-	transcript3912.chr5.nic@SLU7	transcript3912.chr5.nic	protein_coding	160418596,160415125,160414319,160413899,160413456,160412451,160408650,160408329,160407971,160407746,160407476,160406468,160405031,160404809,160404440,160401641	160419090,160415310,160414472,160413979,160413620,160412519,160408697,160408460,160408068,160407813,160407615,160406629,160405135,160404880,160404556,160403464	Gene ID= ENSG00000164609.9 TPM= 6.27 Transcript Type= NA
chr5	160401641	160419394	160401641	160419394	-	ENST00000297151.8@SLU7	ENST00000297151.8	protein_coding	160419023,160415125,160414319,160413899,160413456,160412451,160408650,160408329,160407971,160407746,160407476,160406468,160405031,160404809,160404440,160401641	160419394,160415310,160414472,160413979,160413620,160412519,160408697,160408460,160408068,160407813,160407615,160406629,160405135,160404880,160404556,160403464	Gene ID= ENSG00000164609.9 TPM= 12.07 Transcript Type= protein_coding
chr5	160421822	160428744	160421822	160428744	+	ENST00000352433.9@PTTG1	ENST00000352433.9	protein_coding	160421822,160422302,160422709,160424237,160427715,160428602	160421891,160422403,160422893,160424330,160427873,160428744	Gene ID= ENSG00000164611.12 TPM= 1.93 Transcript Type= protein_coding
chr5	163437561	163445016	163437561	163445016	+	transcript3926.chr5.nnic@CCNG1	transcript3926.chr5.nnic	protein_coding	163437561,163437765,163439257,163441078,163441886,163442045,163442374,163443674,163444337	163437668,163437804,163439520,163441331,163441964,163442143,163442568,163443925,163445016	Gene ID= ENSG00000113328.18 TPM= 7.17 Transcript Type= NA
chr5	163437571	163445014	163437571	163445014	+	ENST00000393929.5@CCNG1	ENST00000393929.5	protein_coding	163437571,163437765,163439257,163441078,163441886,163442045,163442374,163443674	163437664,163437804,163439520,163441331,163441964,163442143,163442568,163445014	Gene ID= ENSG00000113328.18 TPM= 3.7 Transcript Type= protein_coding
chr5	163437581	163445016	163437581	163445016	+	ENST00000340828.6@CCNG1	ENST00000340828.6	protein_coding	163437581,163439257,163441078,163441886,163442045,163442374,163443674	163437804,163439520,163441331,163441964,163442143,163442568,163445016	Gene ID= ENSG00000113328.18 TPM= 189.04 Transcript Type= protein_coding
chr5	163446526	163460140	163446526	163460140	-	ENST00000302764.8@NUDCD2	ENST00000302764.8	protein_coding	163459862,163457562,163456929,163446526	163460140,163457610,163457080,163454050	Gene ID= ENSG00000170584.10 TPM= 1.93 Transcript Type= protein_coding
chr5	163453576	163460125	163453576	163460125	-	transcript3940.chr5.nic@NUDCD2	transcript3940.chr5.nic	protein_coding	163458995,163457562,163456929,163453576	163460125,163457610,163457080,163454050	Gene ID= ENSG00000170584.10 TPM= 5.79 Transcript Type= NA
chr5	163505548	163519322	163505548	163519322	+	ENST00000321757.10@MAT2B	ENST00000321757.10	protein_coding	163505548,163512002,163513555,163513842,163516518,163517561,163518193	163505749,163512196,163513669,163513994,163516711,163517674,163519322	Gene ID= ENSG00000038274.16 TPM= 21.24 Transcript Type= protein_coding
chr5	168486445	168519299	168486445	168519299	+	ENST00000231572.7@RARS	ENST00000231572.7	protein_coding	168486445,168488602,168492659,168493894,168494550,168495315,168497228,168500591,168502001,168506021,168506722,168510581,168516778,168517815,168519081	168486543,168488736,168492847,168494002,168494650,168495436,168497348,168500720,168502105,168506199,168506831,168510686,168516950,168518062,168519299	Gene ID= ENSG00000113643.8 TPM= 54.06 Transcript Type= protein_coding
chr5	168486458	168519299	168486458	168519299	+	transcript3955.chr5.nnic@RARS	transcript3955.chr5.nnic	protein_coding	168486458,168488602,168492659,168494550,168495315,168497228,168500591,168502001,168506021,168506722,168510581,168516778,168517815,168519081	168486543,168488736,168494465,168494650,168495436,168497348,168500720,168502105,168506199,168506831,168510686,168516950,168518062,168519299	Gene ID= ENSG00000113643.8 TPM= 2.9 Transcript Type= NA
chr5	168558328	168579389	168558328	168579389	-	transcript3966.chr5.nic@PANK3	transcript3966.chr5.nic	protein_coding	168579256,168568646,168566013,168563889,168561393,168558328	168579389,168568998,168566266,168564065,168561516,168559157	Gene ID= ENSG00000120137.6 TPM= 1.93 Transcript Type= NA
chr5	171387648	171411137	171387648	171411137	+	ENST00000296930.9@NPM1	ENST00000296930.9	protein_coding	171387648,171390051,171391305,171391706,171392710,171392914,171400153,171400839,171405302,171407700,171410527	171388006,171390130,171391424,171391799,171392816,171392978,171400210,171400925,171405403,171407774,171411137	Gene ID= ENSG00000181163.13 TPM= 313.73 Transcript Type= protein_coding
chr5	171387829	171410884	171387829	171410884	+	ENST00000351986.10@NPM1	ENST00000351986.10	protein_coding	171387829,171390051,171391305,171391706,171392710,171392914,171400153,171405302,171407700,171410527	171388006,171390130,171391424,171391799,171392816,171392978,171400210,171405403,171407774,171410884	Gene ID= ENSG00000181163.13 TPM= 3.86 Transcript Type= protein_coding
chr5	171861549	172006873	171861549	172006873	-	ENST00000296933.10@FBXW11	ENST00000296933.10	protein_coding	172006458,171914343,171910572,171899914,171899004,171891467,171878011,171876285,171872872,171870748,171869729,171868610,171861549	172006873,171914405,171910797,171900100,171899094,171891604,171878129,171876534,171872990,171870858,171869807,171868796,171864101	Gene ID= ENSG00000072803.17 TPM= 3.86 Transcript Type= protein_coding
chr5	172042073	172188386	172042073	172188386	-	ENST00000176763.9@STK10	ENST00000176763.9	protein_coding	172187887,172156624,172127373,172117481,172107780,172106620,172105656,172096426,172093412,172090232,172082961,172082326,172064720,172061139,172057349,172055588,172054569,172052929,172042073	172188386,172156788,172127421,172117630,172107852,172106814,172105737,172096560,172093960,172090362,172083084,172082505,172064812,172061268,172057473,172055776,172054694,172053042,172045022	Gene ID= ENSG00000072786.12 TPM= 4.83 Transcript Type= protein_coding
chr5	172209640	172283759	172209640	172283759	-	transcript4003.chr5.nnic@UBTD2	transcript4003.chr5.nnic	protein_coding	172283596,172257361,172234122,172209640	172283759,172258718,172234358,172212227	Gene ID= ENSG00000168246.5 TPM= 1.93 Transcript Type= NA
chr5	172209640	172284071	172209640	172284071	-	ENST00000393792.2@UBTD2	ENST00000393792.2	protein_coding	172283596,172234122,172209640	172284071,172234358,172212227	Gene ID= ENSG00000168246.5 TPM= 11.58 Transcript Type= protein_coding
chr5	172768090	172771195	172768090	172771195	-	ENST00000239223.3@DUSP1	ENST00000239223.3	protein_coding	172770586,172770161,172769575,172768090	172771195,172770306,172769794,172769132	Gene ID= ENSG00000120129.5 TPM= 383.23 Transcript Type= protein_coding
chr5	172792003	172795554	172792003	172795554	-	transcript4022.chr5.nnic@NA	transcript4022.chr5.nnic	NA	172792003	172795554	Gene ID= novel_gene_chr5_4023 TPM= 2.9 Transcript Type= NA
chr5	172834275	172952685	172834275	172952685	+	ENST00000393784.7@ERGIC1	ENST00000393784.7	protein_coding	172834275,172888699,172897002,172909667,172914714,172924005,172926509,172932436,172935188,172950709	172834433,172888760,172897074,172909761,172914838,172924109,172926569,172932536,172935310,172952685	Gene ID= ENSG00000113719.15 TPM= 26.06 Transcript Type= protein_coding
chr5	172918243	172919317	172918243	172919317	-	transcript4030.chr5.nnic@NA	transcript4030.chr5.nnic	NA	172918243	172919317	Gene ID= novel_gene_chr5_4031 TPM= 1.93 Transcript Type= NA
chr5	172959424	172969771	172959424	172969771	+	ENST00000265100.6@RPL26L1	ENST00000265100.6	protein_coding	172959424,172959865,172968459,172969413	172959468,172960041,172968599,172969771	Gene ID= ENSG00000037241.7 TPM= 6.76 Transcript Type= protein_coding
chr5	172983807	173034892	172983807	173034892	+	transcript4034.chr5.nnic@ATP6V0E1	transcript4034.chr5.nnic	protein_coding	172983807,172986696,172994775,173020238,173034399	172983964,172986760,172994822,173020367,173034892	Gene ID= ENSG00000113732.8 TPM= 7.72 Transcript Type= NA
chr5	172983757	173035445	172983757	173035445	+	ENST00000519374.5@ATP6V0E1	ENST00000519374.5	protein_coding	172983757,172994775,173020238,173034399	172983964,172994822,173020367,173035445	Gene ID= ENSG00000113732.8 TPM= 147.69 Transcript Type= protein_coding
chr5	172983781	173034884	172983781	173034884	+	ENST00000519911.5@ATP6V0E1	ENST00000519911.5	protein_coding	172983781,172994775,173034399	172983964,172994822,173034884	Gene ID= ENSG00000113732.8 TPM= 3.86 Transcript Type= protein_coding
chr5	173056352	173139284	173056352	173139284	+	ENST00000296953.6@CREBRF	ENST00000296953.6	protein_coding	173056352,173080585,173086501,173090315,173108624,173110522,173112306,173123080,173133630	173056479,173080784,173086626,173091401,173108818,173110711,173112379,173123202,173139284	Gene ID= ENSG00000164463.12 TPM= 1.93 Transcript Type= protein_coding
chr5	173144442	173164340	173144442	173164340	+	ENST00000231668.13@BNIP1	ENST00000231668.13	protein_coding	173144442,173146866,173151566,173154322,173158744,173159933,173163725	173144629,173146958,173151694,173154413,173158845,173160051,173164340	Gene ID= ENSG00000113734.17 TPM= 3.86 Transcript Type= protein_coding
chr5	173144515	173164387	173144515	173164387	+	ENST00000351486.9@BNIP1	ENST00000351486.9	protein_coding	173144515,173146866,173154322,173158744,173159933,173163725	173144629,173146958,173154413,173158845,173160051,173164387	Gene ID= ENSG00000113734.17 TPM= 26.06 Transcript Type= protein_coding
chr5	173314713	173329503	173314713	173329503	-	ENST00000265087.8@STC2	ENST00000265087.8	protein_coding	173328043,173325868,173323219,173314713	173329503,173326010,173323430,173318249	Gene ID= ENSG00000113739.10 TPM= 5.79 Transcript Type= protein_coding
chr5	173607521	173616588	173607521	173616588	-	ENST00000285908.5@BOD1	ENST00000285908.5	protein_coding	173616200,173613131,173607521	173616588,173613255,173608292	Gene ID= ENSG00000145919.10 TPM= 26.06 Transcript Type= protein_coding
chr5	173607514	173616660	173607514	173616660	-	ENST00000311086.8@BOD1	ENST00000311086.8	protein_coding	173616200,173613131,173609238,173607514	173616660,173613255,173609434,173608292	Gene ID= ENSG00000145919.10 TPM= 93.64 Transcript Type= protein_coding
chr5	173888280	173961976	173888280	173961976	+	ENST00000265085.9@CPEB4	ENST00000265085.9	protein_coding	173888280,173910523,173932450,173943026,173944967,173949508,173949960,173951824,173953091,173955910	173890858,173910604,173932500,173943049,173945140,173949597,173950078,173951938,173953272,173961976	Gene ID= ENSG00000113742.12 TPM= 72.4 Transcript Type= protein_coding
chr5	173892276	173894150	173892276	173894150	-	transcript4078.chr5.nnic@NA	transcript4078.chr5.nnic	NA	173892276	173894150	Gene ID= novel_gene_chr5_4079 TPM= 9.65 Transcript Type= NA
chr5	174724533	174730893	174724533	174730893	+	ENST00000239243.6@MSX2	ENST00000239243.6	protein_coding	174724533,174729159	174725038,174730893	Gene ID= ENSG00000120149.8 TPM= 3.86 Transcript Type= protein_coding
chr5	174724602	174729880	174724602	174729880	+	ENST00000507785.2@MSX2	ENST00000507785.2	protein_coding	174724602,174729159	174725067,174729880	Gene ID= ENSG00000120149.8 TPM= 2.9 Transcript Type= protein_coding
chr5	175478395	175529742	175478395	175529742	+	ENST00000321442.9@SFXN1	ENST00000321442.9	protein_coding	175478395,175492095,175509032,175510109,175511451,175512111,175513463,175516614,175521919,175522375,175526638	175478639,175492267,175509202,175510207,175511526,175512196,175513590,175516663,175521968,175522422,175529742	Gene ID= ENSG00000164466.12 TPM= 6.76 Transcript Type= protein_coding
chr5	175959527	175968299	175959527	175968299	-	ENST00000265097.8@THOC3	ENST00000265097.8	protein_coding	175967942,175967111,175964951,175961273,175961051,175959527	175968299,175967267,175965155,175961434,175961151,175960132	Gene ID= ENSG00000051596.9 TPM= 10.62 Transcript Type= protein_coding
chr5	176346061	176361968	176346061	176361968	-	ENST00000298569.8@KIAA1191	ENST00000298569.8	protein_coding	176361602,176359811,176359481,176355571,176352622,176350613,176348250,176347921,176346061	176361968,176359918,176359567,176355749,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 90.61 Transcript Type= protein_coding
chr5	176346065	176361807	176346065	176361807	-	ENST00000614420.4@KIAA1191	ENST00000614420.4	protein_coding	176361602,176355571,176352622,176350613,176348250,176347921,176346065	176361807,176355749,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 11.94 Transcript Type= protein_coding
chr5	176346065	176361807	176346065	176361807	-	ENST00000620366.4@KIAA1191	ENST00000620366.4	protein_coding	176361602,176352622,176350613,176348250,176347921,176346065	176361807,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 9.04 Transcript Type= protein_coding
chr5	176346062	176361765	176346062	176361765	-	ENST00000393725.6@KIAA1191	ENST00000393725.6	protein_coding	176361602,176359811,176355571,176352622,176350613,176348250,176347921,176346062	176361765,176359918,176355749,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 14.35 Transcript Type= protein_coding
chr5	176388747	176389771	176388747	176389771	+	ENST00000274787.2@HIGD2A	ENST00000274787.2	protein_coding	176388747,176389331	176388973,176389771	Gene ID= ENSG00000146066.2 TPM= 210.44 Transcript Type= protein_coding
chr5	176388776	176389759	176388776	176389759	+	transcript4136.chr5.nnic@NA	transcript4136.chr5.nnic	NA	176388776	176389759	Gene ID= novel_gene_chr5_4137 TPM= 3.86 Transcript Type= NA
chr5	176405559	176416592	176405559	176416592	-	transcript4133.chr5.nic@CLTB	transcript4133.chr5.nic	protein_coding	176416177,176410257,176405559	176416592,176410303,176406708	Gene ID= ENSG00000175416.12 TPM= 19.55 Transcript Type= NA
chr5	176392455	176416569	176392455	176416569	-	ENST00000345807.6@CLTB	ENST00000345807.6	protein_coding	176416177,176410257,176397930,176397607,176392455	176416569,176410303,176398047,176397718,176392945	Gene ID= ENSG00000175416.12 TPM= 282.11 Transcript Type= protein_coding
chr5	176448355	176510074	176448355	176510074	+	ENST00000261942.6@FAF2	ENST00000261942.6	protein_coding	176448355,176479188,176486355,176488951,176492194,176493999,176494184,176496486,176498914,176500003,176506768	176448470,176479256,176486489,176489027,176492332,176494084,176494275,176496663,176499085,176500146,176510074	Gene ID= ENSG00000113194.12 TPM= 17.38 Transcript Type= protein_coding
chr5	176526950	176529784	176526950	176529784	-	transcript4144.chr5.nnic@NA	transcript4144.chr5.nnic	NA	176526950	176529784	Gene ID= novel_gene_chr5_4145 TPM= 2.9 Transcript Type= NA
chr5	176647409	176659051	176647409	176659051	+	transcript4150.chr5.nic@TSPAN17	transcript4150.chr5.nic	protein_coding	176647409,176651616,176651754,176652743,176654895,176656078,176656700,176656895	176647702,176651666,176651900,176652913,176655020,176656125,176656816,176659051	Gene ID= ENSG00000048140.17 TPM= 9.17 Transcript Type= NA
chr5	176647502	176659051	176647502	176659051	+	ENST00000508164.5@TSPAN17	ENST00000508164.5	protein_coding	176647502,176651616,176651754,176652743,176654895,176656078,176656700,176656895,176657518	176647702,176651666,176651900,176652913,176655020,176656125,176656816,176656956,176659051	Gene ID= ENSG00000048140.17 TPM= 7.24 Transcript Type= protein_coding
chr5	176880869	176899346	176880869	176899346	-	transcript4155.chr5.nic@HK3	transcript4155.chr5.nic	protein_coding	176899267,176896064,176891388,176891037,176890822,176890635,176889645,176889381,176888332,176887451,176887201,176887002,176884039,176883770,176881944,176881692,176881302,176880869	176899346,176896185,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176887746,176887337,176887121,176884134,176883869,176882127,176881847,176881535,176881217	Gene ID= ENSG00000160883.10 TPM= 8.69 Transcript Type= NA
chr5	176880869	176899346	176880869	176899346	-	transcript4156.chr5.nnic@HK3	transcript4156.chr5.nnic	protein_coding	176899267,176896064,176893367,176891388,176891037,176890822,176890635,176889645,176889381,176888332,176887451,176887201,176887002,176884039,176883770,176881692,176881302,176880869	176899346,176896185,176893455,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176887746,176887337,176887121,176884134,176883869,176882127,176881535,176881217	Gene ID= ENSG00000160883.10 TPM= 1.93 Transcript Type= NA
chr5	176880871	176899332	176880871	176899332	-	ENST00000292432.9@HK3	ENST00000292432.9	protein_coding	176899267,176896064,176891388,176891037,176890822,176890635,176889645,176889381,176888709,176888332,176887451,176887201,176887002,176884039,176883770,176881944,176881692,176881302,176880871	176899332,176896185,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176888565,176887746,176887337,176887121,176884134,176883869,176882127,176881847,176881535,176881217	Gene ID= ENSG00000160883.10 TPM= 1.93 Transcript Type= protein_coding
chr5	176905050	177006779	176905050	177006779	-	transcript4158.chr5.nic@UIMC1	transcript4158.chr5.nic	protein_coding	177006539,176982469,176975396,176970742,176969601,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006779,176982623,176975480,176970866,176969706,176969291,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 4.18 Transcript Type= NA
chr5	176905050	177006794	176905050	177006794	-	transcript4164.chr5.nic@UIMC1	transcript4164.chr5.nic	protein_coding	177006650,176982469,176975396,176970742,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006794,176982623,176975480,176970866,176969706,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 3.21 Transcript Type= NA
chr5	176905050	177006794	176905050	177006794	-	transcript4166.chr5.nic@UIMC1	transcript4166.chr5.nic	protein_coding	177006650,176982469,176975396,176970742,176969601,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006794,176982623,176975480,176970866,176969706,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 2.9 Transcript Type= NA
chr5	176905050	177006779	176905050	177006779	-	transcript4168.chr5.nnic@UIMC1	transcript4168.chr5.nnic	protein_coding	177006539,176982469,176975396,176970742,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006779,176982623,176975480,176970866,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 14.48 Transcript Type= NA
chr5	176905050	177006794	176905050	177006794	-	transcript4169.chr5.nnic@UIMC1	transcript4169.chr5.nnic	protein_coding	177006650,176982469,176975396,176970742,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006794,176982623,176975480,176970866,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 10.62 Transcript Type= NA
chr5	176905050	177006733	176905050	177006733	-	transcript4170.chr5.nnic@UIMC1	transcript4170.chr5.nnic	protein_coding	177006650,176975396,176970742,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006733,176975480,176970866,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 1.93 Transcript Type= NA
chr5	176905050	177006751	176905050	177006751	-	ENST00000511320.5@UIMC1	ENST00000511320.5	protein_coding	177006650,176982469,176975396,176970742,176969601,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006751,176982623,176975480,176970866,176969706,176969291,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 3.21 Transcript Type= protein_coding
chr5	177022696	177065985	177022696	177065985	+	ENST00000358149.7@ZNF346	ENST00000358149.7	protein_coding	177022696,177041126,177041778,177044389,177050751,177062058,177064512	177022913,177041229,177041870,177044533,177050936,177062151,177065985	Gene ID= ENSG00000113761.11 TPM= 3.86 Transcript Type= protein_coding
chr5	177133671	177137404	177133671	177137404	+	transcript4185.chr5.nic@NSD1	transcript4185.chr5.nic	protein_coding	177133671,177135087,177135941,177136873	177133952,177135200,177136030,177137404	Gene ID= ENSG00000165671.19 TPM= 1.93 Transcript Type= NA
chr5	177301452	177303681	177301452	177303681	-	ENST00000495458.5@RAB24	ENST00000495458.5	protein_coding	177303009,177302752,177302577,177302128,177301925,177301452	177303681,177302830,177302644,177302496,177301987,177301807	Gene ID= ENSG00000169228.13 TPM= 1.28 Transcript Type= retained_intron
chr5	177301464	177303708	177301464	177303708	-	ENST00000303251.10@RAB24	ENST00000303251.10	protein_coding	177303172,177303009,177302752,177302577,177302397,177302128,177301925,177301464	177303708,177303077,177302830,177302644,177302496,177302178,177301987,177301807	Gene ID= ENSG00000169228.13 TPM= 18.66 Transcript Type= protein_coding
chr5	177301451	177303706	177301451	177303706	-	ENST00000393611.6@RAB24	ENST00000393611.6	protein_coding	177303407,177303172,177303009,177302752,177302577,177302397,177302128,177301925,177301451	177303706,177303320,177303077,177302830,177302644,177302496,177302178,177301987,177301807	Gene ID= ENSG00000169228.13 TPM= 5.15 Transcript Type= protein_coding
chr5	177307208	177311875	177307208	177311875	-	ENST00000503782.1@MXD3	ENST00000503782.1	protein_coding	177311761,177310426,177307781,177307208	177311875,177311484,177307964,177307703	Gene ID= ENSG00000213347.10 TPM= 1.93 Transcript Type= retained_intron
chr5	177303774	177306959	177303774	177306959	+	ENST00000303204.8@PRELID1	ENST00000303204.8	protein_coding	177303774,177304625,177305871,177306098,177306422	177304077,177304850,177305984,177306176,177306959	Gene ID= ENSG00000169230.9 TPM= 78.19 Transcript Type= protein_coding
chr5	177331954	177351670	177331954	177351670	-	transcript4191.chr5.nnic@LMAN2	transcript4191.chr5.nnic	protein_coding	177351623,177351452,177351173,177338488,177337706,177337363,177337136,177334284,177331954	177351670,177351563,177351291,177338605,177337785,177337524,177337250,177334403,177332246	Gene ID= ENSG00000169223.14 TPM= 5.79 Transcript Type= NA
chr5	177331562	177351852	177331562	177351852	-	ENST00000303127.11@LMAN2	ENST00000303127.11	protein_coding	177351452,177351173,177338488,177337706,177337363,177337136,177334284,177331562	177351852,177351291,177338605,177337785,177337524,177337250,177334403,177332246	Gene ID= ENSG00000169223.14 TPM= 87.84 Transcript Type= protein_coding
chr5	177426691	177442622	177426691	177442622	+	transcript4209.chr5.nnic@GRK6	transcript4209.chr5.nnic	protein_coding	177426691,177430676,177430872,177431995,177432233,177432706,177433147,177433347,177433536,177433914,177434902,177435032,177436073,177436393,177440700,177440919,177441737	177426897,177430752,177430967,177432107,177432310,177432806,177433239,177433410,177433676,177434104,177434939,177435121,177436281,177436530,177440837,177441053,177442622	Gene ID= ENSG00000198055.10 TPM= 1.93 Transcript Type= NA
chr5	177453527	177456289	177453527	177456289	+	transcript4216.chr5.nnic@NA	transcript4216.chr5.nnic	NA	177453527	177456289	Gene ID= novel_gene_chr5_4217 TPM= 2.9 Transcript Type= NA
chr5	177456927	177462446	177456927	177462446	-	transcript4229.chr5.nic@DBN1	transcript4229.chr5.nic	protein_coding	177462232,177460644,177460432,177459098,177458058,177457655,177456927	177462446,177460703,177460555,177459268,177458707,177457757,177457503	Gene ID= ENSG00000113758.13 TPM= 3.86 Transcript Type= NA
chr5	177456608	177473741	177456608	177473741	-	ENST00000309007.9@DBN1	ENST00000309007.9	protein_coding	177473436,177468844,177468108,177467743,177467481,177467255,177466911,177466772,177460644,177460432,177459098,177458058,177457655,177456608	177473741,177468899,177468220,177467817,177467627,177467332,177467062,177466835,177460703,177460555,177459268,177458707,177457757,177457503	Gene ID= ENSG00000113758.13 TPM= 7.72 Transcript Type= protein_coding
chr5	177456936	177473637	177456936	177473637	-	ENST00000393565.5@DBN1	ENST00000393565.5	protein_coding	177473436,177468844,177468108,177467743,177467481,177467255,177466911,177466772,177460644,177460432,177459603,177459098,177458058,177457655,177456936	177473637,177468899,177468220,177467817,177467627,177467332,177467062,177466835,177460703,177460555,177459740,177459268,177458707,177457757,177457503	Gene ID= ENSG00000113758.13 TPM= 9.65 Transcript Type= protein_coding
chr5	177490246	177497647	177490246	177497647	-	transcript4235.chr5.nic@PDLIM7	transcript4235.chr5.nic	protein_coding	177497528,177496417,177492526,177492405,177491807,177491404,177491010,177490870,177490246	177497647,177496523,177492677,177492435,177491925,177491420,177491146,177490906,177490593	Gene ID= ENSG00000196923.13 TPM= 32.58 Transcript Type= NA
chr5	177490246	177497647	177490246	177497647	-	transcript4241.chr5.nic@PDLIM7	transcript4241.chr5.nic	protein_coding	177497528,177496417,177492526,177492405,177491404,177491010,177490870,177490246	177497647,177496523,177492677,177492435,177491420,177491146,177490906,177490593	Gene ID= ENSG00000196923.13 TPM= 295.39 Transcript Type= NA
chr5	177483396	177497583	177483396	177497583	-	ENST00000355841.6@PDLIM7	ENST00000355841.6	protein_coding	177497528,177496417,177492526,177492405,177491807,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483396	177497583,177496523,177492677,177492435,177491925,177491146,177490906,177489832,177489627,177488248,177484190,177483982,177483730	Gene ID= ENSG00000196923.13 TPM= 7 Transcript Type= protein_coding
chr5	177490246	177497573	177490246	177497573	-	ENST00000355572.6@PDLIM7	ENST00000355572.6	protein_coding	177497528,177496417,177492526,177492405,177491807,177491010,177490870,177490246	177497573,177496523,177492677,177492435,177491925,177491146,177490906,177490593	Gene ID= ENSG00000196923.13 TPM= 32.1 Transcript Type= protein_coding
chr5	177511577	177517469	177511577	177517469	-	ENST00000507955.5@DDX41	ENST00000507955.5	protein_coding	177516919,177516725,177516288,177516119,177515929,177515685,177515186,177514916,177514701,177513685,177513353,177513011,177512780,177512496,177512322,177512096,177511577	177517469,177516835,177516447,177516193,177515989,177515821,177515258,177515069,177514837,177513847,177513484,177513082,177512876,177512645,177512393,177512206,177511927	Gene ID= ENSG00000183258.11 TPM= 27.03 Transcript Type= protein_coding
chr5	177519792	177554569	177519792	177554569	-	transcript4272.chr5.nic@FAM193B	transcript4272.chr5.nic	protein_coding	177554249,177538905,177537873,177536358,177532443,177531282,177524185,177523957,177521974,177519792	177554569,177539147,177538107,177536745,177532641,177531521,177525205,177524032,177522071,177520181	Gene ID= ENSG00000146067.15 TPM= 4.83 Transcript Type= NA
chr5	177552893	177554558	177552893	177554558	-	transcript4279.chr5.nic@FAM193B	transcript4279.chr5.nic	protein_coding	177554249,177552893	177554558,177553802	Gene ID= ENSG00000146067.15 TPM= 1.93 Transcript Type= NA
chr5	177519788	177554507	177519788	177554507	-	ENST00000514747.5@FAM193B	ENST00000514747.5	protein_coding	177554249,177538905,177537873,177536358,177532443,177524185,177523957,177521974,177519788	177554507,177539147,177538107,177536745,177532641,177525205,177524032,177522071,177520181	Gene ID= ENSG00000146067.15 TPM= 2.9 Transcript Type= protein_coding
chr5	177592161	177596116	177592161	177596116	+	transcript4282.chr5.nnic@TMED9	transcript4282.chr5.nnic	protein_coding	177592161,177592575,177593650,177594139,177595267,177595939	177592398,177592675,177593775,177594285,177595873,177596116	Gene ID= ENSG00000184840.11 TPM= 2.41 Transcript Type= NA
chr5	177592158	177596124	177592158	177596124	+	ENST00000332598.6@TMED9	ENST00000332598.6	protein_coding	177592158,177592575,177593650,177594139,177595267	177592398,177592675,177593775,177594285,177596124	Gene ID= ENSG00000184840.11 TPM= 47.78 Transcript Type= protein_coding
chr5	177600104	177610266	177600104	177610266	+	transcript4286.chr5.nnic@B4GALT7	transcript4286.chr5.nnic	protein_coding	177600104,177601426,177602032,177604179,177607302,177608539,177608910,177609540	177600260,177601478,177602193,177604541,177607527,177608622,177609014,177610266	Gene ID= ENSG00000027847.13 TPM= 2.9 Transcript Type= NA
chr5	177600111	177610328	177600111	177610328	+	transcript4290.chr5.nnic@B4GALT7	transcript4290.chr5.nnic	protein_coding	177600111,177602032,177604179,177607302,177608539,177608910,177609540	177600260,177602193,177604541,177607527,177608622,177609014,177610328	Gene ID= ENSG00000027847.13 TPM= 5.31 Transcript Type= NA
chr5	177600140	177610266	177600140	177610266	+	transcript4291.chr5.nnic@B4GALT7	transcript4291.chr5.nnic	protein_coding	177600140,177602032,177604179,177607302,177608539,177608910,177609540	177600372,177602193,177604541,177607527,177608622,177609014,177610266	Gene ID= ENSG00000027847.13 TPM= 2.9 Transcript Type= NA
chr5	177600100	177610347	177600100	177610347	+	ENST00000029410.9@B4GALT7	ENST00000029410.9	protein_coding	177600100,177604179,177607302,177608539,177608910,177609540	177600260,177604541,177607527,177608622,177609014,177610347	Gene ID= ENSG00000027847.13 TPM= 7.24 Transcript Type= protein_coding
chr5	177875522	177884272	177875522	177884272	+	ENST00000506672.5@AC106795.1	ENST00000506672.5	transcribed_unprocessed_pseudogene	177875522,177876532,177878644,177882369,177882652,177883667	177875860,177876688,177878848,177882530,177882752,177884272	Gene ID= ENSG00000170089.15 TPM= 1.93 Transcript Type= processed_transcript
chr5	178113443	178126087	178113443	178126087	+	ENST00000274605.5@N4BP3	ENST00000274605.5	protein_coding	178113443,178119554,178120178,178121098,178121474	178113771,178119913,178120699,178121352,178126087	Gene ID= ENSG00000145911.5 TPM= 2.9 Transcript Type= protein_coding
chr5	178130993	178150565	178130993	178150565	+	transcript4320.chr5.nic@RMND5B	transcript4320.chr5.nic	protein_coding	178130993,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969	178131376,178138258,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178150565	Gene ID= ENSG00000145916.18 TPM= 8.88 Transcript Type= NA
chr5	178130993	178148540	178130993	178148540	+	transcript4333.chr5.nic@RMND5B	transcript4333.chr5.nic	protein_coding	178130993,178138108,178142583,178143627,178143942,178146114,178147533,178147729,178147969	178131376,178138258,178142992,178143727,178144108,178146279,178147635,178147883,178148540	Gene ID= ENSG00000145916.18 TPM= 10.04 Transcript Type= NA
chr5	178131011	178148549	178131011	178148549	+	ENST00000507575.5@RMND5B	ENST00000507575.5	protein_coding	178131011,178138108,178142583,178143627,178146114,178147533,178147729,178147969	178131054,178138258,178142992,178144108,178146279,178147635,178147883,178148549	Gene ID= ENSG00000145916.18 TPM= 2.04 Transcript Type= retained_intron
chr5	178130996	178148568	178130996	178148568	+	ENST00000313386.8@RMND5B	ENST00000313386.8	protein_coding	178130996,178131237,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969	178131054,178131376,178138258,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178148568	Gene ID= ENSG00000145916.18 TPM= 63.04 Transcript Type= protein_coding
chr5	178141243	178144731	178141243	178144731	+	transcript4350.chr5.nnic@NA	transcript4350.chr5.nnic	NA	178141243	178144731	Gene ID= novel_gene_chr5_4351 TPM= 1.93 Transcript Type= NA
chr5	178149460	178153967	178149460	178153967	-	ENST00000274606.7@NHP2	ENST00000274606.7	protein_coding	178153658,178153491,178150888,178149460	178153967,178153560,178150993,178149838	Gene ID= ENSG00000145912.8 TPM= 153.48 Transcript Type= protein_coding
chr5	178149482	178153829	178149482	178153829	-	ENST00000314397.8@NHP2	ENST00000314397.8	protein_coding	178153658,178153491,178149482	178153829,178153560,178149838	Gene ID= ENSG00000145912.8 TPM= 3.86 Transcript Type= protein_coding
chr5	178203855	178205043	178203855	178205043	-	transcript4385.chr5.nnic@NA	transcript4385.chr5.nnic	NA	178203855	178205043	Gene ID= novel_gene_chr5_4386 TPM= 1.93 Transcript Type= NA
chr5	178204507	178211163	178204507	178211163	+	ENST00000358344.7@HNRNPAB	ENST00000358344.7	protein_coding	178204507,178204815,178205842,178206732,178207094,178209330,178210132,178210553	178204740,178205046,178206010,178206890,178207225,178209447,178210272,178211163	Gene ID= ENSG00000197451.11 TPM= 24.13 Transcript Type= protein_coding
chr5	178204539	178211142	178204539	178211142	+	ENST00000355836.9@HNRNPAB	ENST00000355836.9	protein_coding	178204539,178204815,178205842,178206732,178207094,178209330,178210553	178204740,178205046,178206010,178206890,178207225,178209447,178211142	Gene ID= ENSG00000197451.11 TPM= 2.9 Transcript Type= protein_coding
chr5	178204571	178211142	178204571	178211142	+	ENST00000504898.5@HNRNPAB	ENST00000504898.5	protein_coding	178204571,178205842,178206732,178207094,178209330,178210132,178210553	178205046,178206010,178206890,178207225,178209447,178210272,178211142	Gene ID= ENSG00000197451.11 TPM= 1.93 Transcript Type= protein_coding
chr5	178208587	178232776	178208587	178232776	-	transcript4355.chr5.nnic@PHYKPL	transcript4355.chr5.nnic	protein_coding	178232492,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208587	178232776,178231523,178230099,178225429,178224729,178224564,178222934,178222610,178215430,178214885,178213103,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 2.17 Transcript Type= NA
chr5	178208587	178232798	178208587	178232798	-	transcript4360.chr5.nic@PHYKPL	transcript4360.chr5.nic	protein_coding	178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208587	178232798,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 2.9 Transcript Type= NA
chr5	178208587	178232786	178208587	178232786	-	transcript4362.chr5.nic@PHYKPL	transcript4362.chr5.nic	protein_coding	178232492,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178211890,178208587	178232786,178231523,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 3.14 Transcript Type= NA
chr5	178208497	178232785	178208497	178232785	-	ENST00000308158.9@PHYKPL	ENST00000308158.9	protein_coding	178232492,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208497	178232785,178231523,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 4.1 Transcript Type= protein_coding
chr5	178393654	178396895	178393654	178396895	-	transcript4399.chr5.nnic@NA	transcript4399.chr5.nnic	NA	178393654	178396895	Gene ID= novel_gene_chr5_4400 TPM= 50.2 Transcript Type= NA
chr5	178602665	178627060	178602665	178627060	-	transcript4406.chr5.nnic@CLK4	transcript4406.chr5.nnic	protein_coding	178626946,178623256,178622393,178619838,178618556,178617344,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178602665	178627060,178623416,178622459,178619896,178618778,178617434,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 5.79 Transcript Type= NA
chr5	178603272	178627080	178603272	178627080	-	transcript4413.chr5.nnic@CLK4	transcript4413.chr5.nnic	protein_coding	178626946,178623256,178622393,178619838,178618556,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178603272	178627080,178623416,178622459,178619896,178618778,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 1.93 Transcript Type= NA
chr5	178621809	178627137	178621809	178627137	-	transcript4424.chr5.nic@CLK4	transcript4424.chr5.nic	protein_coding	178626946,178623256,178621809	178627137,178623416,178622459	Gene ID= ENSG00000113240.12 TPM= 1.93 Transcript Type= NA
chr5	178602664	178627114	178602664	178627114	-	ENST00000316308.8@CLK4	ENST00000316308.8	protein_coding	178626946,178623256,178618556,178617344,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178602664	178627114,178623416,178618778,178617434,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 1.93 Transcript Type= protein_coding
chr5	178711592	178730702	178711592	178730702	-	ENST00000335815.6@ZNF354A	ENST00000335815.6	protein_coding	178730556,178728990,178726999,178725376,178711592	178730702,178729073,178727125,178725471,178713621	Gene ID= ENSG00000169131.11 TPM= 8.69 Transcript Type= protein_coding
chr5	179023752	179035064	179023752	179035064	+	ENST00000444149.6@ZNF879	ENST00000444149.6	protein_coding	179023752,179024970,179027473,179028032,179032205	179023904,179025037,179027599,179028127,179035064	Gene ID= ENSG00000234284.6 TPM= 4.83 Transcript Type= protein_coding
chr5	179023804	179034384	179023804	179034384	+	transcript4442.chr5.nnic@ZNF879	transcript4442.chr5.nnic	protein_coding	179023804,179024970,179027473,179028032,179032205	179024033,179025037,179027599,179028127,179034384	Gene ID= ENSG00000234284.6 TPM= 1.93 Transcript Type= NA
chr5	179550558	179610012	179550558	179610012	+	transcript4449.chr5.nic@RUFY1	transcript4449.chr5.nic	protein_coding	179550558,179555650,179560025,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179550879,179555790,179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610012	Gene ID= ENSG00000176783.14 TPM= 5.39 Transcript Type= NA
chr5	179559692	179610011	179559692	179610011	+	ENST00000437570.6@RUFY1	ENST00000437570.6	protein_coding	179559692,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610011	Gene ID= ENSG00000176783.14 TPM= 5.87 Transcript Type= protein_coding
chr5	179559753	179610012	179559753	179610012	+	transcript4454.chr5.nnic@RUFY1	transcript4454.chr5.nnic	protein_coding	179559753,179562547,179567461,179569302,179580723,179585796,179586331,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179560198,179562664,179567562,179569425,179581012,179585865,179586475,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610012	Gene ID= ENSG00000176783.14 TPM= 3.62 Transcript Type= NA
chr5	179550558	179610026	179550558	179610026	+	ENST00000319449.8@RUFY1	ENST00000319449.8	protein_coding	179550558,179560025,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179550879,179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610026	Gene ID= ENSG00000176783.14 TPM= 35.31 Transcript Type= protein_coding
chr5	179579659	179580473	179579659	179580473	-	transcript4479.chr5.nnic@NA	transcript4479.chr5.nnic	NA	179579659	179580473	Gene ID= novel_gene_chr5_4480 TPM= 3.86 Transcript Type= NA
chr5	179614178	179623710	179614178	179623710	-	ENST00000393432.8@HNRNPH1	ENST00000393432.8	protein_coding	179623595,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614178	179623710,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 10.62 Transcript Type= protein_coding
chr5	179614179	179623721	179614179	179623721	-	ENST00000442819.6@HNRNPH1	ENST00000442819.6	protein_coding	179623636,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614179	179623721,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 16.41 Transcript Type= protein_coding
chr5	179614181	179623679	179614181	179623679	-	transcript4460.chr5.nic@HNRNPH1	transcript4460.chr5.nic	protein_coding	179623595,179623037,179621242,179620892,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614181	179623679,179623164,179621397,179621035,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 4.34 Transcript Type= NA
chr5	179614181	179623685	179614181	179623685	-	transcript4461.chr5.nic@HNRNPH1	transcript4461.chr5.nic	protein_coding	179623636,179623037,179621242,179620892,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614181	179623685,179623164,179621397,179621035,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 9.17 Transcript Type= NA
chr5	179614181	179623679	179614181	179623679	-	transcript4463.chr5.nic@HNRNPH1	transcript4463.chr5.nic	protein_coding	179623595,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617021,179616126,179615546,179614181	179623679,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 3.86 Transcript Type= NA
chr5	179614181	179623685	179614181	179623685	-	transcript4464.chr5.nic@HNRNPH1	transcript4464.chr5.nic	protein_coding	179623636,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617021,179616126,179615546,179614181	179623685,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 3.86 Transcript Type= NA
chr5	179614181	179623169	179614181	179623169	-	ENST00000510678.5@HNRNPH1	ENST00000510678.5	protein_coding	179623037,179621242,179620892,179618145,179617989,179617799,179617514,179617051,179616899,179616126,179615546,179614181	179623169,179621397,179621035,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr5	179698906	179730925	179698906	179730925	+	ENST00000247461.8@CANX	ENST00000247461.8	protein_coding	179698906,179705679,179706258,179707132,179708239,179708978,179709873,179716105,179719668,179720404,179722804,179723660,179724657,179726680,179728591	179699102,179705852,179706331,179707190,179708380,179709059,179710065,179716294,179719781,179720560,179723019,179723779,179724783,179726759,179730925	Gene ID= ENSG00000127022.14 TPM= 108.11 Transcript Type= protein_coding
chr5	179698906	179730925	179698906	179730925	+	ENST00000452673.6@CANX	ENST00000452673.6	protein_coding	179698906,179705679,179706258,179707132,179708239,179708978,179709873,179716105,179719668,179720404,179722804,179723660,179724657,179726680,179728591	179699049,179705852,179706331,179707190,179708380,179709059,179710065,179716294,179719781,179720560,179723019,179723779,179724783,179726759,179730925	Gene ID= ENSG00000127022.14 TPM= 23.17 Transcript Type= protein_coding
chr5	179732796	179777278	179732796	179777278	+	transcript4510.chr5.nnic@MAML1	transcript4510.chr5.nnic	protein_coding	179732796,179765326,179768850,179771147,179776050	179733427,179766741,179769089,179771243,179777278	Gene ID= ENSG00000161021.12 TPM= 1.93 Transcript Type= NA
chr5	179732850	179777286	179732850	179777286	+	ENST00000292599.3@MAML1	ENST00000292599.3	protein_coding	179732850,179765326,179768850,179771147,179773895	179733427,179766741,179769089,179771243,179777286	Gene ID= ENSG00000161021.12 TPM= 13.51 Transcript Type= protein_coding
chr5	179732832	179735193	179732832	179735193	+	transcript4511.chr5.nnic@NA	transcript4511.chr5.nnic	NA	179732832	179735193	Gene ID= novel_gene_chr5_4512 TPM= 1.93 Transcript Type= NA
chr5	179792392	179796511	179792392	179796511	+	transcript4565.chr5.nnic@NA	transcript4565.chr5.nnic	NA	179792392	179796511	Gene ID= novel_gene_chr5_4566 TPM= 8.69 Transcript Type= NA
chr5	179797610	179806955	179797610	179806955	-	transcript4515.chr5.nnic@MGAT4B	transcript4515.chr5.nnic	protein_coding	179806694,179806487,179801784,179801554,179801334,179800907,179800484,179800184,179799954,179799506,179799203,179798928,179798513,179798347,179798165,179797610	179806955,179806629,179801969,179801694,179801467,179800953,179800597,179800259,179800068,179799636,179799310,179799121,179798591,179798434,179798277,179798068	Gene ID= ENSG00000161013.16 TPM= 10.14 Transcript Type= NA
chr5	179797597	179806934	179797597	179806934	-	ENST00000292591.11@MGAT4B	ENST00000292591.11	protein_coding	179806487,179801784,179801554,179801334,179800907,179800484,179800184,179799954,179799506,179799203,179798928,179798513,179798347,179798165,179797597	179806934,179801969,179801694,179801467,179800953,179800597,179800259,179800068,179799636,179799310,179799121,179798591,179798434,179798277,179798068	Gene ID= ENSG00000161013.16 TPM= 67.09 Transcript Type= protein_coding
chr5	179820859	179838073	179820859	179838073	+	transcript4534.chr5.nnic@SQSTM1	transcript4534.chr5.nnic	protein_coding	179820859,179822958,179823858,179824182,179825146,179833032,179833587,179836436,179837717	179821141,179823053,179824087,179824323,179825226,179833246,179833782,179836665,179838073	Gene ID= ENSG00000161011.19 TPM= 24.91 Transcript Type= NA
chr5	179820759	179838078	179820759	179838078	+	ENST00000389805.8@SQSTM1	ENST00000389805.8	protein_coding	179820759,179822958,179823858,179824182,179825146,179833032,179833587,179836436	179821141,179823053,179824087,179824323,179825226,179833246,179833782,179838078	Gene ID= ENSG00000161011.19 TPM= 96.8 Transcript Type= protein_coding
chr5	179833716	179837250	179833716	179837250	-	transcript4563.chr5.nnic@MRNIP	transcript4563.chr5.nnic	protein_coding	179836501,179833716	179837250,179833723	Gene ID= ENSG00000161010.14 TPM= 252.91 Transcript Type= NA
chr5	179834725	179837252	179834725	179837252	+	transcript4567.chr5.nnic@NA	transcript4567.chr5.nnic	NA	179834725	179837252	Gene ID= novel_gene_chr5_4568 TPM= 10.78 Transcript Type= NA
chr5	179862066	179907859	179862066	179907859	-	ENST00000356834.7@TBC1D9B	ENST00000356834.7	protein_coding	179907704,179904702,179899189,179894386,179893209,179891379,179888103,179879628,179879047,179878309,179875920,179874902,179873119,179872892,179871462,179870255,179869769,179867778,179867445,179865838,179865254,179862066	179907859,179904812,179899307,179894614,179893467,179891586,179888312,179879789,179879197,179878523,179876037,179875187,179873248,179872990,179871530,179870495,179869834,179867849,179867495,179865888,179865360,179864128	Gene ID= ENSG00000197226.12 TPM= 42.96 Transcript Type= protein_coding
chr5	179862066	179907856	179862066	179907856	-	ENST00000355235.7@TBC1D9B	ENST00000355235.7	protein_coding	179907704,179904702,179899189,179894386,179893209,179891379,179888103,179879628,179879047,179878309,179875920,179874902,179873119,179872892,179871462,179870255,179869769,179867778,179865838,179865254,179862066	179907856,179904812,179899307,179894614,179893467,179891586,179888312,179879789,179879197,179878523,179876037,179875187,179873248,179872990,179871530,179870495,179869834,179867849,179865888,179865360,179864128	Gene ID= ENSG00000197226.12 TPM= 14 Transcript Type= protein_coding
chr5	180233143	180292099	180233143	180292099	-	ENST00000452135.6@MAPK9	ENST00000452135.6	protein_coding	180291848,180280440,180269280,180264781,180261684,180248973,180247439,180242573,180241031,180239924,180238332,180233143	180292099,180280608,180269409,180264839,180261822,180249138,180247510,180242755,180241155,180239987,180238403,180236526	Gene ID= ENSG00000050748.17 TPM= 12.07 Transcript Type= protein_coding
chr5	180233594	180292056	180233594	180292056	-	ENST00000393360.7@MAPK9	ENST00000393360.7	protein_coding	180291848,180280440,180269280,180264781,180261684,180248973,180247439,180242573,180241031,180239924,180238332,180233594	180292056,180280608,180269409,180264839,180261822,180249138,180247510,180242755,180241155,180239987,180238403,180236531	Gene ID= ENSG00000050748.17 TPM= 11.1 Transcript Type= protein_coding
chr5	180300690	180353387	180300690	180353387	-	ENST00000253778.12@GFPT2	ENST00000253778.12	protein_coding	180353211,180338493,180336479,180335828,180331495,180330700,180328277,180324816,180324188,180318793,180316963,180316764,180316341,180313807,180312430,180307176,180304772,180302423,180300690	180353387,180338600,180336577,180335953,180331553,180330834,180328338,180324895,180324305,180318956,180317058,180316861,180316461,180313964,180312544,180307303,180304939,180302584,180301608	Gene ID= ENSG00000131459.12 TPM= 15.44 Transcript Type= protein_coding
chr5	180300699	180353338	180300699	180353338	-	transcript4619.chr5.nnic@GFPT2	transcript4619.chr5.nnic	protein_coding	180353211,180338493,180336479,180335828,180331495,180330700,180328277,180324816,180324188,180318793,180316963,180316764,180316341,180313807,180312430,180307176,180304772,180300699	180353338,180338600,180336577,180335953,180331553,180330834,180328338,180324895,180324305,180318956,180317058,180316861,180316461,180313964,180312544,180307303,180304939,180301608	Gene ID= ENSG00000131459.12 TPM= 2.9 Transcript Type= NA
chr5	180494417	180578353	180494417	180578353	+	ENST00000261951.8@CNOT6	ENST00000261951.8	protein_coding	180494417,180529275,180549931,180553386,180564489,180564675,180565820,180567088,180567849,180569110,180571230,180573988	180494763,180529388,180550117,180553471,180564593,180564743,180565977,180567242,180568003,180569340,180571432,180578353	Gene ID= ENSG00000113300.11 TPM= 2.9 Transcript Type= protein_coding
chr5	180790541	180810138	180790541	180810138	-	transcript4631.chr5.nic@MGAT1	transcript4631.chr5.nic	protein_coding	180810040,180808502,180790541	180810138,180809076,180793097	Gene ID= ENSG00000131446.16 TPM= 34.75 Transcript Type= NA
chr5	180790543	180802885	180790543	180802885	-	ENST00000307826.4@MGAT1	ENST00000307826.4	protein_coding	180802680,180790543	180802885,180793097	Gene ID= ENSG00000131446.16 TPM= 151.55 Transcript Type= protein_coding
chr5	180829954	180831605	180829954	180831605	-	ENST00000623091.1@HEIH	ENST00000623091.1	TEC	180829954	180831605	Gene ID= ENSG00000278970.1 TPM= 32.82 Transcript Type= TEC
chr5	180847615	180861276	180847615	180861276	-	ENST00000512132.5@ZFP62	ENST00000512132.5	protein_coding	180861219,180851988,180847615	180861276,180852060,180851493	Gene ID= ENSG00000196670.13 TPM= 1.93 Transcript Type= protein_coding
chr5	181040225	181061523	181040225	181061523	+	ENST00000327705.13@BTNL9	ENST00000327705.13	protein_coding	181040225,181045467,181047927,181050088,181053200,181053469,181054239,181055433,181055989,181058352,181059237	181040432,181045598,181048271,181050369,181053316,181053501,181054259,181055453,181056015,181058378,181061523	Gene ID= ENSG00000165810.16 TPM= 9.65 Transcript Type= protein_coding
chr5	181052890	181061523	181052890	181061523	+	transcript4665.chr5.nic@BTNL9	transcript4665.chr5.nic	protein_coding	181052890,181053469,181054239,181055433,181055989,181058352,181059237	181053316,181053501,181054259,181055453,181056015,181058378,181061523	Gene ID= ENSG00000165810.16 TPM= 8.69 Transcript Type= NA
chr5	181040234	181051103	181040234	181051103	+	transcript4668.chr5.nic@BTNL9	transcript4668.chr5.nic	protein_coding	181040234,181045467,181047927,181050088	181040432,181045598,181048271,181051103	Gene ID= ENSG00000165810.16 TPM= 1.93 Transcript Type= NA
chr5	181053086	181055314	181053086	181055314	+	transcript4672.chr5.nnic@NA	transcript4672.chr5.nnic	NA	181053086	181055314	Gene ID= novel_gene_chr5_4673 TPM= 2.9 Transcript Type= NA
chr5	181191924	181194429	181191924	181194429	+	ENST00000514487.1@AC008443.5	ENST00000514487.1	antisense_RNA	181191924,181194234	181192016,181194429	Gene ID= ENSG00000250222.1 TPM= 2.9 Transcript Type= antisense_RNA
chr5	181193925	181205363	181193925	181205363	-	transcript4677.chr5.nnic@TRIM7	transcript4677.chr5.nnic	protein_coding	181204589,181203745,181203477,181199851,181199095,181198690,181198183,181193925	181205363,181204452,181203640,181200081,181199117,181198805,181198218,181195677	Gene ID= ENSG00000146054.17 TPM= 5.79 Transcript Type= NA
chr5	181193924	181205172	181193924	181205172	-	ENST00000274773.11@TRIM7	ENST00000274773.11	protein_coding	181204589,181203545,181199851,181199095,181198690,181198183,181193924	181205172,181203640,181200081,181199117,181198805,181198218,181195677	Gene ID= ENSG00000146054.17 TPM= 23.17 Transcript Type= protein_coding
chr5	181203118	181205293	181203118	181205293	-	ENST00000334421.5@TRIM7	ENST00000334421.5	protein_coding	181204589,181203118	181205293,181203640	Gene ID= ENSG00000146054.17 TPM= 48.27 Transcript Type= protein_coding
chr5	181223290	181235808	181223290	181235808	+	ENST00000351937.9@TRIM41	ENST00000351937.9	protein_coding	181223290,181230744,181232659,181233413,181233636,181234174,181234932,181235354	181224812,181230839,181232889,181233435,181233763,181234349,181234995,181235808	Gene ID= ENSG00000146063.19 TPM= 1.93 Transcript Type= protein_coding
chr5	181236937	181244209	181236937	181244209	-	ENST00000512805.5@RACK1	ENST00000512805.5	protein_coding	181243692,181242174,181241492,181239487,181239067,181238099,181237609,181236937	181244209,181242345,181241639,181239582,181239177,181238239,181237719,181237042	Gene ID= ENSG00000204628.11 TPM= 1187.53 Transcript Type= protein_coding
chr5	181236909	181243916	181236909	181243916	-	ENST00000511473.5@RACK1	ENST00000511473.5	protein_coding	181243680,181242174,181241492,181239487,181239067,181238099,181237609,181236909	181243916,181242345,181241639,181239582,181239177,181238239,181237719,181237042	Gene ID= ENSG00000204628.11 TPM= 31.66 Transcript Type= nonsense_mediated_decay
chr5	181236937	181243902	181236937	181243902	-	ENST00000508682.5@RACK1	ENST00000508682.5	protein_coding	181243692,181242174,181241492,181240216,181239487,181239067,181238099,181237609,181236937	181243902,181242345,181241639,181240327,181239582,181239177,181238239,181237719,181237042	Gene ID= ENSG00000204628.11 TPM= 2.12 Transcript Type= nonsense_mediated_decay
chr5	181261171	181264570	181261171	181264570	+	transcript4725.chr5.nic@TRIM52-AS1	transcript4725.chr5.nic	processed_transcript	181261171,181263628,181264052	181261384,181263766,181264570	Gene ID= ENSG00000248275.1 TPM= 4.83 Transcript Type= NA
chr5	181261212	181264261	181261212	181264261	+	ENST00000514146.1@TRIM52-AS1	ENST00000514146.1	processed_transcript	181261212,181263628	181261384,181264261	Gene ID= ENSG00000248275.1 TPM= 22.2 Transcript Type= lincRNA
chr5	181261224	181264257	181261224	181264257	+	ENST00000509252.1@TRIM52-AS1	ENST00000509252.1	processed_transcript	181261224,181263628,181264052	181261384,181263789,181264257	Gene ID= ENSG00000248275.1 TPM= 1.93 Transcript Type= antisense_RNA
chr6	292097	351355	292097	351355	+	ENST00000344450.9@DUSP22	ENST00000344450.9	protein_coding	292097,304628,311880,335114,345854,348103,348769,350822	292560,304661,311962,335163,345928,348274,348841,351355	Gene ID= ENSG00000112679.14 TPM= 31.86 Transcript Type= protein_coding
chr6	292462	351353	292462	351353	+	ENST00000419235.6@DUSP22	ENST00000419235.6	protein_coding	292462,304628,311880,335114,345854,348103,348769	292560,304661,311962,335163,345928,348274,351353	Gene ID= ENSG00000112679.14 TPM= 24.13 Transcript Type= protein_coding
chr6	485133	693097	485133	693097	-	transcript13.chr6.nnic@EXOC2	transcript13.chr6.nnic	protein_coding	693019,689139,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,485133	693097,689212,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764	Gene ID= ENSG00000112685.13 TPM= 1.93 Transcript Type= NA
chr6	485133	693111	485133	693111	-	ENST00000230449.8@EXOC2	ENST00000230449.8	protein_coding	693019,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,485133	693111,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764	Gene ID= ENSG00000112685.13 TPM= 12.55 Transcript Type= protein_coding
chr6	1610625	1612194	1610625	1612194	+	transcript24.chr6.nnic@NA	transcript24.chr6.nnic	NA	1610625	1612194	Gene ID= novel_gene_chr6_25 TPM= 2.9 Transcript Type= NA
chr6	1623806	2245692	1623806	2245692	-	ENST00000380815.4@GMDS	ENST00000380815.4	protein_coding	2245321,2124687,2117469,2115771,1960774,1959867,1930103,1742468,1726416,1624472,1623806	2245692,2124731,2117556,2115880,1960966,1959971,1930230,1742586,1726512,1624540,1624231	Gene ID= ENSG00000112699.10 TPM= 5.79 Transcript Type= protein_coding
chr6	2663629	2750966	2663629	2750966	-	ENST00000274643.8@MYLK4	ENST00000274643.8	protein_coding	2750736,2749136,2692784,2688851,2685483,2685296,2683021,2680221,2679280,2678220,2675047,2671276,2663629	2750966,2749406,2692859,2688956,2685576,2685405,2683162,2680291,2679408,2678372,2675125,2671348,2667899	Gene ID= ENSG00000145949.9 TPM= 26.06 Transcript Type= protein_coding
chr6	2674492	2750939	2674492	2750939	-	transcript45.chr6.nic@MYLK4	transcript45.chr6.nic	protein_coding	2750736,2749136,2692784,2688851,2685483,2685296,2683021,2680221,2679280,2678220,2674492	2750939,2749406,2692859,2688956,2685576,2685405,2683162,2680291,2679408,2678372,2675125	Gene ID= ENSG00000145949.9 TPM= 4.83 Transcript Type= NA
chr6	2719690	2750939	2719690	2750939	-	transcript47.chr6.nnic@MYLK4	transcript47.chr6.nnic	protein_coding	2750736,2749136,2723644,2721716,2721036,2719690	2750939,2749406,2723725,2721863,2721153,2720399	Gene ID= ENSG00000145949.9 TPM= 3.54 Transcript Type= NA
chr6	2719690	2750939	2719690	2750939	-	transcript53.chr6.nnic@MYLK4	transcript53.chr6.nnic	protein_coding	2750736,2749136,2721716,2721036,2719690	2750939,2749406,2721784,2721153,2720399	Gene ID= ENSG00000145949.9 TPM= 2.58 Transcript Type= NA
chr6	2719690	2750939	2719690	2750939	-	transcript54.chr6.nnic@MYLK4	transcript54.chr6.nnic	protein_coding	2750736,2749136,2721716,2721036,2719690	2750939,2749406,2721863,2721153,2720399	Gene ID= ENSG00000145949.9 TPM= 13.2 Transcript Type= NA
chr6	2704676	2750939	2704676	2750939	-	transcript60.chr6.nnic@MYLK4	transcript60.chr6.nnic	protein_coding	2750736,2749136,2706658,2704676	2750939,2749406,2706850,2705696	Gene ID= ENSG00000145949.9 TPM= 1.93 Transcript Type= NA
chr6	2704676	2750939	2704676	2750939	-	transcript64.chr6.nnic@MYLK4	transcript64.chr6.nnic	protein_coding	2750736,2749136,2704676	2750939,2749406,2705696	Gene ID= ENSG00000145949.9 TPM= 7.72 Transcript Type= NA
chr6	2765434	2785745	2765434	2785745	+	transcript70.chr6.nnic@WRNIP1	transcript70.chr6.nnic	protein_coding	2765434,2768691,2770120,2772988,2779263,2783406,2784324,2785007	2766444,2768882,2770361,2773141,2779492,2783561,2784403,2785745	Gene ID= ENSG00000124535.15 TPM= 3.86 Transcript Type= NA
chr6	2765414	2785745	2765414	2785745	+	transcript78.chr6.nnic@WRNIP1	transcript78.chr6.nnic	protein_coding	2765414,2779263,2783406,2784324,2785007	2766444,2779492,2783561,2784403,2785745	Gene ID= ENSG00000124535.15 TPM= 4.83 Transcript Type= NA
chr6	2765414	2785745	2765414	2785745	+	ENST00000380771.8@WRNIP1	ENST00000380771.8	protein_coding	2765414,2768691,2770195,2779263,2783406,2784324,2785007	2766444,2768882,2770361,2779492,2783561,2784403,2785745	Gene ID= ENSG00000124535.15 TPM= 2.9 Transcript Type= protein_coding
chr6	2832332	2842006	2832332	2842006	-	ENST00000380739.5@SERPINB1	ENST00000380739.5	protein_coding	2841812,2840419,2838549,2837882,2836108,2835856,2832332	2842006,2840594,2838686,2837999,2836250,2836023,2834012	Gene ID= ENSG00000021355.12 TPM= 60.81 Transcript Type= protein_coding
chr6	2888666	2892136	2888666	2892136	-	transcript91.chr6.nic@SERPINB9	transcript91.chr6.nic	protein_coding	2891833,2888666	2892136,2890570	Gene ID= ENSG00000170542.5 TPM= 5.79 Transcript Type= NA
chr6	2948160	2971790	2948160	2971790	-	transcript113.chr6.nnic@SERPINB6	transcript113.chr6.nnic	protein_coding	2971533,2968779,2955524,2954592,2953044,2948914,2948160	2971790,2968913,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 9.55 Transcript Type= NA
chr6	2948159	2971585	2948159	2971585	-	ENST00000380546.7@SERPINB6	ENST00000380546.7	protein_coding	2971491,2959168,2955524,2954592,2953044,2948914,2948159	2971585,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 12.44 Transcript Type= protein_coding
chr6	2948159	2971305	2948159	2971305	-	ENST00000380539.5@SERPINB6	ENST00000380539.5	protein_coding	2971248,2959168,2955524,2954592,2953044,2948914,2948159	2971305,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 10.51 Transcript Type= protein_coding
chr6	2948159	2971856	2948159	2971856	-	ENST00000335686.9@SERPINB6	ENST00000335686.9	protein_coding	2971533,2959168,2955524,2954592,2953044,2948914,2948159	2971856,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 140.83 Transcript Type= protein_coding
chr6	2948159	2971206	2948159	2971206	-	ENST00000380529.5@SERPINB6	ENST00000380529.5	protein_coding	2971117,2959168,2955524,2954592,2953044,2948914,2948159	2971206,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 18.23 Transcript Type= protein_coding
chr6	2958191	2959671	2958191	2959671	+	transcript129.chr6.nnic@NA	transcript129.chr6.nnic	NA	2958191	2959671	Gene ID= novel_gene_chr6_130 TPM= 2.9 Transcript Type= NA
chr6	2958194	2961345	2958194	2961345	+	transcript133.chr6.nnic@NA	transcript133.chr6.nnic	NA	2958194	2961345	Gene ID= novel_gene_chr6_134 TPM= 1.93 Transcript Type= NA
chr6	2988648	2991173	2988648	2991173	+	ENST00000605901.1@LINC01011	ENST00000605901.1	lincRNA	2988648,2989528,2989869	2988709,2989733,2991173	Gene ID= ENSG00000244041.7 TPM= 1.93 Transcript Type= lincRNA
chr6	2988640	2994402	2988640	2994402	+	transcript135.chr6.nnic@NQO2	transcript135.chr6.nnic	protein_coding	2988640,2993931,2994278	2988709,2994053,2994402	Gene ID= ENSG00000124588.19 TPM= 3.86 Transcript Type= NA
chr6	2999860	3019755	2999860	3019755	+	transcript142.chr6.nic@NQO2	transcript142.chr6.nic	protein_coding	2999860,3003669,3004495,3006468,3010025,3012544,3015530,3016884,3019479	3000085,3003789,3004651,3006559,3010189,3012674,3015643,3016985,3019755	Gene ID= ENSG00000124588.19 TPM= 6.2 Transcript Type= NA
chr6	2999826	3019755	2999826	3019755	+	transcript145.chr6.nic@NQO2	transcript145.chr6.nic	protein_coding	2999826,3004495,3006468,3010025,3012544,3015530,3016884,3019479	3000085,3004651,3006559,3010189,3012674,3015643,3016985,3019755	Gene ID= ENSG00000124588.19 TPM= 23.57 Transcript Type= NA
chr6	2999860	3019755	2999860	3019755	+	transcript147.chr6.nic@NQO2	transcript147.chr6.nic	protein_coding	2999860,3003669,3006468,3010025,3012544,3015530,3016884,3019479	3000085,3003789,3006559,3010189,3012674,3015643,3016985,3019755	Gene ID= ENSG00000124588.19 TPM= 6.2 Transcript Type= NA
chr6	2999864	3019755	2999864	3019755	+	transcript153.chr6.nnic@NQO2	transcript153.chr6.nnic	protein_coding	2999864,3006468,3010057,3012544,3015530,3016884,3019479	3000085,3006559,3010189,3012674,3015643,3016985,3019755	Gene ID= ENSG00000124588.19 TPM= 5.96 Transcript Type= NA
chr6	3018940	3020319	3018940	3020319	-	transcript175.chr6.nnic@NA	transcript175.chr6.nnic	NA	3018940	3020319	Gene ID= novel_gene_chr6_176 TPM= 3.86 Transcript Type= NA
chr6	3063967	3065093	3063967	3065093	+	transcript192.chr6.nnic@NA	transcript192.chr6.nnic	NA	3063967	3065093	Gene ID= novel_gene_chr6_193 TPM= 3.86 Transcript Type= NA
chr6	3068424	3115185	3068424	3115185	+	ENST00000259808.8@RIPK1	ENST00000259808.8	protein_coding	3068424,3076764,3077779,3080979,3083085,3085259,3089581,3104225,3105482,3110803,3113053	3068661,3076987,3077935,3081116,3083313,3085408,3089657,3104315,3106051,3110955,3115185	Gene ID= ENSG00000137275.13 TPM= 8.69 Transcript Type= protein_coding
chr6	3068045	3068894	3068045	3068894	-	ENST00000606441.1@AL031963.3	ENST00000606441.1	antisense_RNA	3068045	3068894	Gene ID= ENSG00000272277.1 TPM= 2.9 Transcript Type= antisense_RNA
chr6	3118692	3153578	3118692	3153578	+	ENST00000380379.9@BPHL	ENST00000380379.9	protein_coding	3118692,3123657,3127242,3129045,3137362,3140386,3152488	3118847,3123760,3127408,3129198,3137493,3140509,3153578	Gene ID= ENSG00000137274.12 TPM= 8.69 Transcript Type= protein_coding
chr6	3153669	3157526	3153669	3157526	-	ENST00000333628.3@TUBB2A	ENST00000333628.3	protein_coding	3157407,3156044,3155625,3153669	3157526,3156152,3155735,3154923	Gene ID= ENSG00000137267.5 TPM= 96.53 Transcript Type= protein_coding
chr6	3224261	3227735	3224261	3227735	-	ENST00000259818.7@TUBB2B	ENST00000259818.7	protein_coding	3227487,3226561,3226159,3224261	3227735,3226669,3226269,3225811	Gene ID= ENSG00000137285.9 TPM= 2.9 Transcript Type= protein_coding
chr6	3258894	3268049	3258894	3268049	+	ENST00000438998.6@PSMG4	ENST00000438998.6	protein_coding	3258894,3263684,3267591	3259196,3263759,3268049	Gene ID= ENSG00000180822.11 TPM= 23.17 Transcript Type= protein_coding
chr6	3258944	3304354	3258944	3304354	+	transcript215.chr6.nnic@PSMG4	transcript215.chr6.nnic	protein_coding	3258944,3263684,3302858	3259196,3263759,3304354	Gene ID= ENSG00000180822.11 TPM= 2.9 Transcript Type= NA
chr6	3258952	3267781	3258952	3267781	+	ENST00000419065.6@PSMG4	ENST00000419065.6	protein_coding	3258952,3263684,3264209,3267591	3259196,3263759,3264325,3267781	Gene ID= ENSG00000180822.11 TPM= 2.9 Transcript Type= protein_coding
chr6	3260293	3263664	3260293	3263664	-	transcript217.chr6.nnic@NA	transcript217.chr6.nnic	NA	3260293	3263664	Gene ID= novel_gene_chr6_218 TPM= 25.1 Transcript Type= NA
chr6	3268962	3457022	3268962	3457022	-	ENST00000436008.6@SLC22A23	ENST00000436008.6	protein_coding	3455906,3415752,3410188,3323834,3298091,3289764,3286859,3285079,3284936,3283852,3268962	3457022,3415855,3410342,3324002,3298218,3289866,3287091,3285111,3284959,3283975,3273412	Gene ID= ENSG00000137266.14 TPM= 33.79 Transcript Type= protein_coding
chr6	3722620	3751916	3722620	3751916	-	transcript223.chr6.nnic@PXDC1	transcript223.chr6.nnic	protein_coding	3751276,3738057,3737617,3737079,3727551,3722620	3751916,3738148,3737730,3737196,3727662,3723736	Gene ID= ENSG00000168994.13 TPM= 5.96 Transcript Type= NA
chr6	3722604	3751977	3722604	3751977	-	transcript230.chr6.nnic@PXDC1	transcript230.chr6.nnic	protein_coding	3751276,3738057,3737079,3722604	3751977,3738148,3737196,3723736	Gene ID= ENSG00000168994.13 TPM= 8.37 Transcript Type= NA
chr6	3722620	3752026	3722620	3752026	-	ENST00000380283.4@PXDC1	ENST00000380283.4	protein_coding	3751276,3738057,3737079,3727551,3722620	3752026,3738148,3737196,3727662,3723736	Gene ID= ENSG00000168994.13 TPM= 71.6 Transcript Type= protein_coding
chr6	3751111	3753871	3751111	3753871	+	ENST00000603791.1@AL391422.3	ENST00000603791.1	antisense_RNA	3751111	3753871	Gene ID= ENSG00000270504.1 TPM= 5.79 Transcript Type= antisense_RNA
chr6	3849386	3851317	3849386	3851317	+	ENST00000380274.1@FAM50B	ENST00000380274.1	protein_coding	3849386	3851317	Gene ID= ENSG00000145945.5 TPM= 12.55 Transcript Type= protein_coding
chr6	3849388	3851317	3849388	3851317	+	ENST00000380272.3@FAM50B	ENST00000380272.3	protein_coding	3849388,3849789	3849486,3851317	Gene ID= ENSG00000145945.5 TPM= 33.79 Transcript Type= protein_coding
chr6	3903994	3906168	3903994	3906168	-	transcript236.chr6.nnic@NA	transcript236.chr6.nnic	NA	3903994	3906168	Gene ID= novel_gene_chr6_237 TPM= 1.93 Transcript Type= NA
chr6	4015767	4018722	4015767	4018722	-	transcript240.chr6.nnic@NA	transcript240.chr6.nnic	NA	4015767	4018722	Gene ID= novel_gene_chr6_241 TPM= 2.9 Transcript Type= NA
chr6	4021312	4064983	4021312	4064983	+	transcript246.chr6.nic@PRPF4B	transcript246.chr6.nic	protein_coding	4021312,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4061015,4061655,4062213,4063074,4064801	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4060686,4061147,4061700,4062299,4063119,4064983	Gene ID= ENSG00000112739.16 TPM= 5.55 Transcript Type= NA
chr6	4021267	4064982	4021267	4064982	+	ENST00000480058.5@PRPF4B	ENST00000480058.5	protein_coding	4021267,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4063074	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4062299,4064982	Gene ID= ENSG00000112739.16 TPM= 4.59 Transcript Type= nonsense_mediated_decay
chr6	4021386	4061907	4021386	4061907	+	transcript252.chr6.nnic@PRPF4B	transcript252.chr6.nnic	protein_coding	4021386,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4057036,4058728,4060413	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4057187,4058814,4061907	Gene ID= ENSG00000112739.16 TPM= 2.65 Transcript Type= NA
chr6	4021326	4061907	4021326	4061907	+	ENST00000337659.10@PRPF4B	ENST00000337659.10	protein_coding	4021326,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4061907	Gene ID= ENSG00000112739.16 TPM= 24.86 Transcript Type= protein_coding
chr6	4115706	4135623	4115706	4135623	-	transcript262.chr6.nnic@ECI2	transcript262.chr6.nnic	protein_coding	4135511,4133549,4130767,4130372,4127762,4126135,4125250,4117308,4115706	4135623,4133711,4130865,4130560,4127831,4126237,4125370,4117451,4116029	Gene ID= ENSG00000198721.12 TPM= 5.55 Transcript Type= NA
chr6	4115689	4135597	4115689	4135597	-	ENST00000380118.7@ECI2	ENST00000380118.7	protein_coding	4135511,4133549,4130767,4130372,4127762,4126135,4125250,4119186,4117308,4115689	4135597,4133711,4130865,4130560,4127831,4126237,4125370,4119275,4117451,4116029	Gene ID= ENSG00000198721.12 TPM= 43.2 Transcript Type= protein_coding
chr6	4115706	4135597	4115706	4135597	-	ENST00000361538.6@ECI2	ENST00000361538.6	protein_coding	4135511,4133549,4130767,4130372,4127762,4126135,4125250,4119186,4117308,4115706	4135597,4133701,4130865,4130560,4127831,4126237,4125370,4119275,4117451,4116029	Gene ID= ENSG00000198721.12 TPM= 26.79 Transcript Type= protein_coding
chr6	4115706	4135564	4115706	4135564	-	ENST00000478266.6@ECI2	ENST00000478266.6	protein_coding	4135511,4133549,4130767,4130372,4127762,4119186,4117308,4115706	4135564,4133711,4130865,4130560,4127831,4119275,4117451,4116029	Gene ID= ENSG00000198721.12 TPM= 1.69 Transcript Type= nonsense_mediated_decay
chr6	4776388	4955547	4776388	4955547	+	transcript269.chr6.nnic@CDYL	transcript269.chr6.nnic	protein_coding	4776388,4891713,4935581,4937565,4943546,4952266,4953898	4776807,4892379,4935771,4937737,4943756,4952409,4955547	Gene ID= ENSG00000153046.17 TPM= 4.83 Transcript Type= NA
chr6	4776435	4954256	4776435	4954256	+	ENST00000397588.7@CDYL	ENST00000397588.7	protein_coding	4776435,4891713,4935515,4937565,4943546,4952266,4953898	4776807,4892379,4935771,4937737,4943756,4952409,4954256	Gene ID= ENSG00000153046.17 TPM= 15.44 Transcript Type= protein_coding
chr6	4995047	5004036	4995047	5004036	-	ENST00000319533.9@RPP40	ENST00000319533.9	protein_coding	5003880,5002101,4999809,4998716,4996222,4995951,4995047	5004036,5002245,4999904,4998841,4996420,4996085,4995276	Gene ID= ENSG00000124787.13 TPM= 1.93 Transcript Type= protein_coding
chr6	5084440	5087221	5084440	5087221	+	transcript282.chr6.nnic@NA	transcript282.chr6.nnic	NA	5084440	5087221	Gene ID= novel_gene_chr6_283 TPM= 2.9 Transcript Type= NA
chr6	5186600	5260737	5186600	5260737	-	ENST00000500576.4@LYRM4	ENST00000500576.4	protein_coding	5260648,5216618,5186600	5260737,5216738,5186980	Gene ID= ENSG00000214113.10 TPM= 2.9 Transcript Type= protein_coding
chr6	5261526	5771580	5261526	5771580	+	ENST00000274680.8@FARS2	ENST00000274680.8	protein_coding	5261526,5368550,5404542,5431041,5545180,5613169,5771291	5261660,5369182,5404701,5431172,5545340,5613320,5771580	Gene ID= ENSG00000145982.11 TPM= 24.13 Transcript Type= protein_coding
chr6	5997999	6006967	5997999	6006967	-	ENST00000244766.6@NRN1	ENST00000244766.6	protein_coding	6006695,6002353,5997999	6006967,6002497,5999204	Gene ID= ENSG00000124785.8 TPM= 6.27 Transcript Type= protein_coding
chr6	5998002	6004044	5998002	6004044	-	ENST00000622188.4@NRN1	ENST00000622188.4	protein_coding	6003703,6003169,6002353,5998002	6004044,6003273,6002497,5999204	Gene ID= ENSG00000124785.8 TPM= 1.45 Transcript Type= protein_coding
chr6	6144085	6320834	6144085	6320834	-	ENST00000264870.7@F13A1	ENST00000264870.7	protein_coding	6320587,6318535,6305351,6266558,6250811,6248312,6224686,6222033,6197223,6195797,6181988,6174580,6167458,6151813,6144085	6320834,6318682,6305539,6266809,6250929,6248419,6224860,6222171,6197326,6195885,6182141,6174867,6167618,6151949,6145772	Gene ID= ENSG00000124491.15 TPM= 21.24 Transcript Type= protein_coding
chr6	6885702	6887510	6885702	6887510	+	transcript304.chr6.nnic@NA	transcript304.chr6.nnic	NA	6885702	6887510	Gene ID= novel_gene_chr6_305 TPM= 1.93 Transcript Type= NA
chr6	7107808	7251980	7107808	7251980	+	ENST00000379938.6@RREB1	ENST00000379938.6	protein_coding	7107808,7176655,7181124,7181870,7187434,7189159,7210804,7211573,7226467,7228997,7240438,7246424,7248511	7108060,7176773,7181246,7182082,7187523,7189322,7210948,7211709,7226656,7231907,7240602,7247221,7251980	Gene ID= ENSG00000124782.19 TPM= 10.14 Transcript Type= protein_coding
chr6	7230594	7251980	7230594	7251980	+	transcript309.chr6.nic@RREB1	transcript309.chr6.nic	protein_coding	7230594,7246424,7248511	7231907,7247221,7251980	Gene ID= ENSG00000124782.19 TPM= 30.41 Transcript Type= NA
chr6	7268306	7313207	7268306	7313207	-	ENST00000474597.5@SSR1	ENST00000474597.5	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295392,7295088,7289868,7268306	7313207,7310029,7303637,7301572,7298823,7298001,7295485,7295102,7289931,7269154	Gene ID= ENSG00000124783.12 TPM= 23.17 Transcript Type= protein_coding
chr6	7281143	7313207	7281143	7313207	-	ENST00000244763.8@SSR1	ENST00000244763.8	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295392,7281143	7313207,7310029,7303637,7301572,7298823,7298001,7295485,7289931	Gene ID= ENSG00000124783.12 TPM= 25.1 Transcript Type= protein_coding
chr6	7287570	7313198	7287570	7313198	-	ENST00000397511.6@SSR1	ENST00000397511.6	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295392,7295088,7287570	7313198,7310029,7303637,7301572,7298823,7298001,7295485,7295102,7289931	Gene ID= ENSG00000124783.12 TPM= 5.79 Transcript Type= protein_coding
chr6	7389496	7418037	7389496	7418037	+	ENST00000379834.6@RIOK1	ENST00000379834.6	protein_coding	7389496,7393099,7395053,7396703,7398698,7400958,7402603,7402817,7403941,7404418,7404918,7405249,7410386,7411332,7412889,7414238,7417331	7390073,7393303,7395143,7396772,7398740,7401050,7402715,7402897,7404027,7404555,7405021,7405355,7410451,7411451,7412942,7414390,7418037	Gene ID= ENSG00000124784.8 TPM= 20.27 Transcript Type= protein_coding
chr6	7590199	7611967	7590199	7611967	+	ENST00000342415.5@SNRNP48	ENST00000342415.5	protein_coding	7590199,7593734,7594099,7595027,7601336,7602623,7605398,7606031,7608825	7590413,7593847,7594159,7595101,7601524,7602744,7605486,7606195,7611967	Gene ID= ENSG00000168566.12 TPM= 1.93 Transcript Type= protein_coding
chr6	7881517	7910814	7881517	7910814	-	ENST00000379757.8@TXNDC5	ENST00000379757.8	protein_coding	7910514,7904574,7899576,7895106,7891621,7889495,7888705,7885961,7884359,7881517	7910814,7904723,7899681,7895202,7891736,7889581,7888848,7886043,7884488,7883266	Gene ID= ENSG00000239264.8 TPM= 74.33 Transcript Type= protein_coding
chr6	8079395	8102578	8079395	8102578	-	ENST00000379715.9@EEF1E1	ENST00000379715.9	protein_coding	8102435,8097267,8090186,8079395	8102578,8097467,8090281,8080030	Gene ID= ENSG00000124802.11 TPM= 7.72 Transcript Type= protein_coding
chr6	8089954	8102559	8089954	8102559	-	ENST00000507463.1@EEF1E1	ENST00000507463.1	protein_coding	8102435,8097267,8089954	8102559,8097467,8090281	Gene ID= ENSG00000124802.11 TPM= 4.83 Transcript Type= protein_coding
chr6	10528356	10629367	10528356	10629367	+	ENST00000379597.7@GCNT2	ENST00000379597.7	protein_coding	10528356,10621351,10626417	10529836,10621443,10629367	Gene ID= ENSG00000111846.16 TPM= 9.65 Transcript Type= protein_coding
chr6	10694695	10709782	10694695	10709782	+	ENST00000379568.3@PAK1IP1	ENST00000379568.3	protein_coding	10694695,10697324,10702369,10702565,10703405,10704507,10704747,10707415,10708953,10709238	10695069,10697486,10702489,10702639,10703457,10704652,10704844,10707514,10709076,10709782	Gene ID= ENSG00000111845.4 TPM= 30.89 Transcript Type= protein_coding
chr6	10723125	10731129	10723125	10731129	+	ENST00000467415.5@TMEM14C	ENST00000467415.5	protein_coding	10723125,10724961,10725907,10728640,10730615	10723241,10725037,10726008,10728727,10731129	Gene ID= ENSG00000111843.13 TPM= 1.45 Transcript Type= processed_transcript
chr6	10722915	10731119	10722915	10731119	+	ENST00000541412.5@TMEM14C	ENST00000541412.5	protein_coding	10722915,10724556,10724961,10725907,10728640,10730615	10723241,10724633,10725037,10726008,10728727,10731119	Gene ID= ENSG00000111843.13 TPM= 2.9 Transcript Type= protein_coding
chr6	10722975	10731129	10722975	10731129	+	ENST00000229563.5@TMEM14C	ENST00000229563.5	protein_coding	10722975,10724570,10724961,10725907,10728640,10730615	10723241,10724633,10725037,10726008,10728727,10731129	Gene ID= ENSG00000111843.13 TPM= 79.64 Transcript Type= protein_coding
chr6	10747781	10756976	10747781	10756976	+	transcript378.chr6.nnic@TMEM14B	transcript378.chr6.nnic	protein_coding	10747781,10749202,10749622,10751133,10756467	10747881,10749268,10749698,10751234,10756976	Gene ID= ENSG00000137210.13 TPM= 2.9 Transcript Type= NA
chr6	10747759	10756981	10747759	10756981	+	ENST00000379542.9@TMEM14B	ENST00000379542.9	protein_coding	10747759,10749202,10749622,10751133,10755142,10756467	10747881,10749268,10749698,10751234,10755232,10756981	Gene ID= ENSG00000137210.13 TPM= 118.73 Transcript Type= protein_coding
chr6	10747811	10756947	10747811	10756947	+	ENST00000379530.7@TMEM14B	ENST00000379530.7	protein_coding	10747811,10749202,10749622,10755142,10756467	10747881,10749268,10749698,10755232,10756947	Gene ID= ENSG00000137210.13 TPM= 2.9 Transcript Type= protein_coding
chr6	11183298	11232682	11183298	11232682	-	ENST00000379446.9@NEDD9	ENST00000379446.9	protein_coding	11232504,11213281,11193591,11192345,11189964,11188218,11183298	11232682,11213727,11193692,11192446,11191205,11188307,11185671	Gene ID= ENSG00000111859.16 TPM= 24.13 Transcript Type= protein_coding
chr6	12011679	12039245	12011679	12039245	+	transcript395.chr6.nic@HIVEP1	transcript395.chr6.nic	protein_coding	12011679,12015526,12037726	12012054,12015668,12039245	Gene ID= ENSG00000095951.16 TPM= 1.93 Transcript Type= NA
chr6	12514110	12514724	12514110	12514724	+	ENST00000391491.2@RPL15P3	ENST00000391491.2	processed_pseudogene	12514110	12514724	Gene ID= ENSG00000212802.4 TPM= 48.27 Transcript Type= processed_pseudogene
chr6	13304951	13328555	13304951	13328555	-	transcript402.chr6.nic@TBC1D7	transcript402.chr6.nic	protein_coding	13328316,13326787,13325094,13320908,13316571,13307600,13306398,13304951	13328555,13326906,13325174,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 6.03 Transcript Type= NA
chr6	13304954	13328583	13304954	13328583	-	ENST00000379307.6@TBC1D7	ENST00000379307.6	protein_coding	13328456,13326787,13320908,13316571,13307600,13306398,13304954	13328583,13326906,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 2.17 Transcript Type= protein_coding
chr6	13304951	13328531	13304951	13328531	-	ENST00000356436.8@TBC1D7	ENST00000356436.8	protein_coding	13328456,13326787,13325094,13320908,13316571,13307600,13306398,13304951	13328531,13326906,13325174,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 6.03 Transcript Type= protein_coding
chr6	13304951	13328531	13304951	13328531	-	ENST00000379300.7@TBC1D7	ENST00000379300.7	protein_coding	13328296,13326787,13325094,13320908,13316571,13307600,13306398,13304951	13328531,13326906,13325174,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 8.93 Transcript Type= protein_coding
chr6	13358115	13360815	13358115	13360815	-	transcript413.chr6.nnic@NA	transcript413.chr6.nnic	NA	13358115	13360815	Gene ID= novel_gene_chr6_414 TPM= 7.72 Transcript Type= NA
chr6	13574557	13612173	13574557	13612173	+	transcript418.chr6.nic@SIRT5	transcript418.chr6.nic	protein_coding	13574557,13579451,13584076,13588331,13591669,13595477,13596963,13599032,13600834,13611790	13574624,13579609,13584225,13588464,13591894,13595564,13597016,13599155,13600949,13612173	Gene ID= ENSG00000124523.15 TPM= 5.79 Transcript Type= NA
chr6	13574643	13614558	13574643	13614558	+	ENST00000606117.1@SIRT5	ENST00000606117.1	protein_coding	13574643,13579451,13584076,13588331,13591669,13595477,13596963,13599032,13600834,13611790	13574744,13579609,13584225,13588464,13591894,13595564,13597016,13599155,13600949,13614558	Gene ID= ENSG00000124523.15 TPM= 6.76 Transcript Type= protein_coding
chr6	13574557	13614102	13574557	13614102	+	transcript425.chr6.nnic@SIRT5	transcript425.chr6.nnic	protein_coding	13574557,13579451,13584076,13591669,13594430,13595477,13596963,13600834,13611790	13574624,13579609,13584225,13591894,13594845,13595564,13597016,13600949,13614102	Gene ID= ENSG00000124523.15 TPM= 1.93 Transcript Type= NA
chr6	13615327	13621205	13615327	13621205	+	ENST00000451315.6@NOL7	ENST00000451315.6	protein_coding	13615327,13615712,13616463,13617770,13618058,13620208,13620408,13620754	13615624,13615772,13616521,13617801,13618139,13620329,13620485,13621205	Gene ID= ENSG00000225921.6 TPM= 5.79 Transcript Type= protein_coding
chr6	13621498	13710841	13621498	13710841	-	transcript432.chr6.nnic@RANBP9	transcript432.chr6.nnic	protein_coding	13710729,13696785,13658780,13657109,13652659,13644545,13642479,13641199,13639563,13637808,13634431,13632370,13625653,13621498	13710841,13696896,13658832,13657276,13652681,13644729,13642591,13641307,13639753,13637955,13634552,13632521,13625764,13622492	Gene ID= ENSG00000010017.12 TPM= 3.86 Transcript Type= NA
chr6	13621498	13711564	13621498	13711564	-	ENST00000011619.5@RANBP9	ENST00000011619.5	protein_coding	13710935,13696785,13658780,13657109,13652659,13644545,13642479,13641199,13639563,13637808,13634431,13632370,13625653,13621498	13711564,13696896,13658832,13657276,13652681,13644729,13642591,13641307,13639753,13637955,13634552,13632521,13625764,13622492	Gene ID= ENSG00000010017.12 TPM= 37.65 Transcript Type= protein_coding
chr6	13790788	13814676	13790788	13814676	-	transcript452.chr6.nnic@MCUR1	transcript452.chr6.nnic	protein_coding	13814015,13806925,13802243,13800341,13798833,13793894,13791878,13790788	13814676,13807044,13802346,13800382,13798904,13793947,13791992,13790864	Gene ID= ENSG00000050393.11 TPM= 2.9 Transcript Type= NA
chr6	15418275	15420249	15418275	15420249	+	transcript458.chr6.nnic@NA	transcript458.chr6.nnic	NA	15418275	15420249	Gene ID= novel_gene_chr6_459 TPM= 1.93 Transcript Type= NA
chr6	15522807	15663051	15522807	15663051	-	transcript460.chr6.nic@DTNBP1	transcript460.chr6.nic	protein_coding	15662814,15660383,15652087,15651313,15637744,15627343,15615267,15593059,15533240,15524526,15522807	15663051,15660521,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524669,15523219	Gene ID= ENSG00000047579.19 TPM= 2.25 Transcript Type= NA
chr6	15522801	15663042	15522801	15663042	-	ENST00000344537.9@DTNBP1	ENST00000344537.9	protein_coding	15662814,15652087,15651313,15637744,15627343,15615267,15593059,15533240,15524526,15522801	15663042,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524669,15523219	Gene ID= ENSG00000047579.19 TPM= 19.62 Transcript Type= protein_coding
chr6	15522843	15663058	15522843	15663058	-	ENST00000513680.5@DTNBP1	ENST00000513680.5	protein_coding	15662814,15660383,15652087,15651313,15637744,15627343,15615267,15593059,15533236,15524526,15522843	15663058,15660521,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524667,15523219	Gene ID= ENSG00000047579.19 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr6	15522810	15663058	15522810	15663058	-	ENST00000355917.7@DTNBP1	ENST00000355917.7	protein_coding	15662814,15652087,15637744,15627343,15615267,15593059,15533240,15524526,15522810	15663058,15652140,15637804,15627475,15615399,15593081,15533395,15524669,15523219	Gene ID= ENSG00000047579.19 TPM= 2.25 Transcript Type= protein_coding
chr6	16129086	16146881	16129086	16146881	+	transcript467.chr6.nic@MYLIP	transcript467.chr6.nic	protein_coding	16129086,16130557,16141625,16143020,16143699,16144897	16129409,16130747,16141810,16143217,16143863,16146881	Gene ID= ENSG00000007944.14 TPM= 3.86 Transcript Type= NA
chr6	16129125	16146881	16129125	16146881	+	ENST00000356840.7@MYLIP	ENST00000356840.7	protein_coding	16129125,16130557,16141625,16143020,16143699,16144897,16146662	16129409,16130747,16141810,16143217,16143863,16145317,16146881	Gene ID= ENSG00000007944.14 TPM= 14.48 Transcript Type= protein_coding
chr6	16277863	16295544	16277863	16295544	+	transcript486.chr6.nnic@GMPR	transcript486.chr6.nnic	protein_coding	16277863,16278784,16285793,16290462,16295006	16277977,16278890,16285835,16290621,16295544	Gene ID= ENSG00000137198.9 TPM= 31.87 Transcript Type= NA
chr6	16277869	16295544	16277869	16295544	+	transcript487.chr6.nnic@GMPR	transcript487.chr6.nnic	protein_coding	16277869,16278784,16285793,16290462,16295006	16277930,16278890,16285835,16290621,16295544	Gene ID= ENSG00000137198.9 TPM= 16.43 Transcript Type= NA
chr6	16277869	16295544	16277869	16295544	+	transcript488.chr6.nnic@GMPR	transcript488.chr6.nnic	protein_coding	16277869,16278784,16285793,16290462,16295006	16278339,16278890,16285835,16290621,16295544	Gene ID= ENSG00000137198.9 TPM= 23.19 Transcript Type= NA
chr6	16238580	16295549	16238580	16295549	+	ENST00000259727.4@GMPR	ENST00000259727.4	protein_coding	16238580,16246842,16250284,16254562,16274415,16278784,16285793,16290462,16295006	16238780,16246961,16250367,16254735,16274496,16278890,16285835,16290621,16295549	Gene ID= ENSG00000137198.9 TPM= 338.82 Transcript Type= protein_coding
chr6	16296763	16299493	16296763	16299493	+	transcript504.chr6.nnic@NA	transcript504.chr6.nnic	NA	16296763	16299493	Gene ID= novel_gene_chr6_505 TPM= 2.9 Transcript Type= NA
chr6	16304156	16327172	16304156	16327172	-	transcript499.chr6.nic@ATXN1	transcript499.chr6.nic	protein_coding	16326394,16304156	16327172,16306859	Gene ID= ENSG00000124788.17 TPM= 2.41 Transcript Type= NA
chr6	16305105	16327307	16305105	16327307	-	transcript502.chr6.nic@ATXN1	transcript502.chr6.nic	protein_coding	16326394,16305105	16327307,16306859	Gene ID= ENSG00000124788.17 TPM= 3.38 Transcript Type= NA
chr6	17280523	17293871	17280523	17293871	+	transcript511.chr6.nic@RBM24	transcript511.chr6.nic	protein_coding	17280523,17282805,17284657,17285053,17291756	17281749,17282928,17284711,17285165,17293871	Gene ID= ENSG00000112183.14 TPM= 55.34 Transcript Type= NA
chr6	17281346	17293875	17281346	17293875	+	ENST00000379052.9@RBM24	ENST00000379052.9	protein_coding	17281346,17282805,17284657,17291756	17281749,17282928,17284711,17293875	Gene ID= ENSG00000112183.14 TPM= 249.21 Transcript Type= protein_coding
chr6	17282701	17293866	17282701	17293866	+	ENST00000318204.5@RBM24	ENST00000318204.5	protein_coding	17282701,17284657,17291756	17282928,17284711,17293866	Gene ID= ENSG00000112183.14 TPM= 173.92 Transcript Type= protein_coding
chr6	17280991	17282676	17280991	17282676	+	transcript525.chr6.nnic@NA	transcript525.chr6.nnic	NA	17280991	17282676	Gene ID= novel_gene_chr6_526 TPM= 3.86 Transcript Type= NA
chr6	17286189	17289783	17286189	17289783	-	transcript527.chr6.nnic@NA	transcript527.chr6.nnic	NA	17286189	17289783	Gene ID= novel_gene_chr6_528 TPM= 58.88 Transcript Type= NA
chr6	17393595	17557790	17393595	17557790	+	transcript533.chr6.nnic@CAP2	transcript533.chr6.nnic	protein_coding	17393595,17421555,17426590,17462996,17507169,17507641,17508772,17513849,17539269,17540973,17542837,17543061,17551464,17556359	17393746,17421676,17426690,17463073,17507312,17507726,17508900,17513954,17539458,17541148,17542960,17543143,17551604,17557790	Gene ID= ENSG00000112186.11 TPM= 17.86 Transcript Type= NA
chr6	17393216	17557792	17393216	17557792	+	ENST00000229922.6@CAP2	ENST00000229922.6	protein_coding	17393216,17421555,17426590,17462996,17507169,17507641,17513849,17539269,17540973,17542837,17543061,17551464,17556359	17393746,17421676,17426690,17463073,17507312,17507726,17513954,17539458,17541148,17542960,17543143,17551604,17557792	Gene ID= ENSG00000112186.11 TPM= 128.87 Transcript Type= protein_coding
chr6	17393633	17556659	17393633	17556659	+	ENST00000489374.5@CAP2	ENST00000489374.5	protein_coding	17393633,17421555,17426590,17462996,17539269,17540973,17542837,17543061,17551464,17556359	17393746,17421676,17426690,17463073,17539458,17541148,17542960,17543143,17551604,17556659	Gene ID= ENSG00000112186.11 TPM= 49.23 Transcript Type= protein_coding
chr6	17600355	17611719	17600355	17611719	+	ENST00000259963.3@FAM8A1	ENST00000259963.3	protein_coding	17600355,17602590,17604906,17605874,17608195	17601121,17602710,17605029,17606013,17611719	Gene ID= ENSG00000137414.5 TPM= 56.95 Transcript Type= protein_coding
chr6	17814928	17987853	17814928	17987853	-	transcript580.chr6.nnic@KIF13A	transcript580.chr6.nnic	protein_coding	17987409,17987054,17898168,17873377,17856030,17855437,17851955,17850323,17849377,17837472,17836878,17833961,17831101,17828240,17826038,17825768,17821786,17817020,17814928	17987853,17987144,17898180,17873437,17856122,17855617,17852042,17850457,17849489,17837583,17837090,17834071,17831235,17828370,17826124,17825934,17821905,17817233,17815637	Gene ID= ENSG00000137177.19 TPM= 9.17 Transcript Type= NA
chr6	17814928	17987904	17814928	17987904	-	transcript582.chr6.nnic@KIF13A	transcript582.chr6.nnic	protein_coding	17987409,17987054,17898168,17873377,17856030,17855437,17851955,17850323,17849377,17837472,17836878,17833961,17831101,17828240,17826038,17825768,17817020,17814928	17987904,17987144,17898180,17873437,17856122,17855617,17852042,17850457,17849489,17837583,17837090,17834071,17831235,17828370,17826124,17825934,17817233,17815637	Gene ID= ENSG00000137177.19 TPM= 5.31 Transcript Type= NA
chr6	17950406	17987623	17950406	17987623	-	ENST00000502704.2@KIF13A	ENST00000502704.2	protein_coding	17987409,17987054,17950406	17987623,17987144,17951429	Gene ID= ENSG00000137177.19 TPM= 5.79 Transcript Type= protein_coding
chr6	18120440	18122687	18120440	18122687	-	ENST00000340650.5@NHLRC1	ENST00000340650.5	protein_coding	18120440	18122687	Gene ID= ENSG00000187566.5 TPM= 5.79 Transcript Type= protein_coding
chr6	18155412	18223853	18155412	18223853	+	transcript598.chr6.nic@KDM1B	transcript598.chr6.nic	protein_coding	18155412,18155883,18159883,18161327,18162835,18166267,18171363,18185772,18187792,18191197,18197057,18197587,18200439,18201486,18205537,18207398,18208132,18212488,18213656,18215007,18217733,18221909	18155571,18155926,18159982,18161454,18162924,18166378,18171479,18185810,18188002,18191381,18197233,18197661,18200576,18201657,18205664,18207529,18208206,18212604,18213781,18215129,18217885,18223853	Gene ID= ENSG00000165097.13 TPM= 9.65 Transcript Type= NA
chr6	18155412	18182532	18155412	18182532	+	transcript601.chr6.nnic@KDM1B	transcript601.chr6.nnic	protein_coding	18155412,18155883,18159883,18161327,18162835,18166267,18171363,18180059	18155571,18155926,18159982,18161454,18162924,18166378,18171479,18182532	Gene ID= ENSG00000165097.13 TPM= 2.9 Transcript Type= NA
chr6	18224181	18264549	18224181	18264549	-	transcript607.chr6.nnic@DEK	transcript607.chr6.nnic	protein_coding	18264385,18263843,18258304,18257953,18256361,18255731,18249651,18237381,18236452,18226174,18224181	18264549,18263996,18258310,18258062,18256455,18255851,18249839,18237516,18236600,18226242,18225730	Gene ID= ENSG00000124795.14 TPM= 2.9 Transcript Type= NA
chr6	18223868	18264823	18223868	18264823	-	ENST00000397239.7@DEK	ENST00000397239.7	protein_coding	18264385,18263843,18258304,18257953,18256361,18255731,18249651,18237381,18236452,18226174,18223868	18264823,18263996,18258405,18258062,18256455,18255851,18249839,18237516,18236600,18226242,18225730	Gene ID= ENSG00000124795.14 TPM= 84.46 Transcript Type= protein_coding
chr6	18387350	18468874	18387350	18468874	+	ENST00000259939.3@RNF144B	ENST00000259939.3	protein_coding	18387350,18399499,18427581,18439684,18457155,18459607,18463291,18464927	18387630,18399699,18427685,18439744,18457359,18459751,18463380,18468874	Gene ID= ENSG00000137393.9 TPM= 9.17 Transcript Type= protein_coding
chr6	18387507	18468619	18387507	18468619	+	transcript622.chr6.nnic@RNF144B	transcript622.chr6.nnic	protein_coding	18387507,18399499,18427581,18439684,18459607,18463291,18464927	18387630,18399699,18427685,18439744,18459751,18463380,18468619	Gene ID= ENSG00000137393.9 TPM= 4.34 Transcript Type= NA
chr6	20491020	20492159	20491020	20492159	+	transcript627.chr6.nnic@NA	transcript627.chr6.nnic	NA	20491020	20492159	Gene ID= novel_gene_chr6_628 TPM= 1.93 Transcript Type= NA
chr6	20771771	21232404	20771771	21232404	+	transcript634.chr6.nnic@CDKAL1	transcript634.chr6.nnic	protein_coding	20771771,20781145,20846075,20955419,21000227,21065048,21108401,21198021,21201110,21230848	20771909,20781265,20846178,20955585,21000372,21065228,21108463,21198104,21201274,21232404	Gene ID= ENSG00000145996.11 TPM= 4.83 Transcript Type= NA
chr6	20534457	21232404	20534457	21232404	+	ENST00000274695.8@CDKAL1	ENST00000274695.8	protein_coding	20534457,20535351,20546346,20548593,20649293,20739519,20758595,20781145,20846075,20955419,21000227,21065048,21108401,21198021,21201110,21230848	20534574,20535394,20546523,20548705,20649377,20739615,20758643,20781265,20846178,20955585,21000372,21065228,21108463,21198104,21201274,21232404	Gene ID= ENSG00000145996.11 TPM= 13.51 Transcript Type= protein_coding
chr6	21593751	21596011	21593751	21596011	+	transcript640.chr6.nnic@NA	transcript640.chr6.nnic	NA	21593751	21596011	Gene ID= novel_gene_chr6_641 TPM= 1.93 Transcript Type= NA
chr6	24402904	24425582	24402904	24425582	+	transcript647.chr6.nnic@MRS2	transcript647.chr6.nnic	protein_coding	24402904,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24422965,24423584	24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24423050,24425582	Gene ID= ENSG00000124532.14 TPM= 1.93 Transcript Type= NA
chr6	24402904	24424260	24402904	24424260	+	transcript653.chr6.nnic@MRS2	transcript653.chr6.nnic	protein_coding	24402904,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24423584	24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24424260	Gene ID= ENSG00000124532.14 TPM= 2.9 Transcript Type= NA
chr6	24402908	24426194	24402908	24426194	+	ENST00000274747.11@MRS2	ENST00000274747.11	protein_coding	24402908,24405168,24412222,24415033,24416397,24418084,24418461,24422937,24423584	24403236,24405241,24412395,24415163,24416513,24418236,24418578,24423050,24426194	Gene ID= ENSG00000124532.14 TPM= 1.93 Transcript Type= protein_coding
chr6	24402904	24423476	24402904	24423476	+	transcript655.chr6.nic@MRS2	transcript655.chr6.nic	protein_coding	24402904,24405168,24412222,24415033,24416397,24418084,24418461,24422937	24403236,24405241,24412395,24415163,24416513,24418236,24418578,24423476	Gene ID= ENSG00000124532.14 TPM= 3.86 Transcript Type= NA
chr6	24402954	24425582	24402954	24425582	+	ENST00000378386.7@MRS2	ENST00000378386.7	protein_coding	24402954,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24422937,24423584	24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24423050,24425582	Gene ID= ENSG00000124532.14 TPM= 12.55 Transcript Type= protein_coding
chr6	24402954	24423476	24402954	24423476	+	ENST00000378353.5@MRS2	ENST00000378353.5	protein_coding	24402954,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24422937	24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24423476	Gene ID= ENSG00000124532.14 TPM= 20.27 Transcript Type= protein_coding
chr6	24405776	24407921	24405776	24407921	-	transcript657.chr6.nnic@NA	transcript657.chr6.nnic	NA	24405776	24407921	Gene ID= novel_gene_chr6_658 TPM= 1.93 Transcript Type= NA
chr6	24494813	24537204	24494813	24537204	+	transcript663.chr6.nnic@ALDH5A1	transcript663.chr6.nnic	protein_coding	24494813,24502523,24503263,24504869,24515167,24520401,24522767,24527997,24532119,24533507,24536510	24495350,24502606,24503433,24504985,24515310,24520544,24522925,24528166,24532177,24533687,24537204	Gene ID= ENSG00000112294.12 TPM= 4.34 Transcript Type= NA
chr6	24494852	24537207	24494852	24537207	+	ENST00000357578.7@ALDH5A1	ENST00000357578.7	protein_coding	24494852,24502523,24503263,24504869,24515167,24520401,24522767,24527997,24532119,24533507	24495350,24502606,24503433,24504985,24515310,24520544,24522925,24528166,24532177,24537207	Gene ID= ENSG00000112294.12 TPM= 15.93 Transcript Type= protein_coding
chr6	24649977	24667033	24649977	24667033	-	ENST00000378198.8@TDP2	ENST00000378198.8	protein_coding	24666698,24666526,24658561,24657812,24654412,24652983,24649977	24667033,24666611,24658734,24657903,24654530,24653153,24651069	Gene ID= ENSG00000111802.13 TPM= 10.62 Transcript Type= protein_coding
chr6	24704861	24720836	24704861	24720836	-	ENST00000378119.8@C6orf62	ENST00000378119.8	protein_coding	24718540,24716148,24714318,24708777,24704861	24720836,24716324,24714440,24708911,24706262	Gene ID= ENSG00000112308.12 TPM= 68.54 Transcript Type= protein_coding
chr6	24774931	24786095	24774931	24786095	+	ENST00000356509.7@GMNN	ENST00000356509.7	protein_coding	24774931,24777222,24780663,24781477,24784087,24784444,24785638	24775112,24777297,24780740,24781621,24784169,24784554,24786095	Gene ID= ENSG00000112312.9 TPM= 1.93 Transcript Type= protein_coding
chr6	24774938	24786099	24774938	24786099	+	ENST00000230056.7@GMNN	ENST00000230056.7	protein_coding	24774938,24777222,24780663,24781477,24784087,24784444,24785638	24775244,24777297,24780740,24781621,24784169,24784554,24786099	Gene ID= ENSG00000112312.9 TPM= 2.9 Transcript Type= protein_coding
chr6	24839359	24911228	24839359	24911228	-	transcript682.chr6.nic@RIPOR2	transcript682.chr6.nic	protein_coding	24910818,24875691,24873644,24872881,24870866,24869094,24865301,24860973,24852575,24850597,24849802,24848025,24842862,24839359	24911228,24875817,24873799,24872959,24870889,24869147,24865450,24861036,24852618,24850722,24849950,24848154,24843554,24839599	Gene ID= ENSG00000111913.17 TPM= 3.86 Transcript Type= NA
chr6	24839938	24911228	24839938	24911228	-	transcript683.chr6.nic@RIPOR2	transcript683.chr6.nic	protein_coding	24910818,24875691,24873644,24872881,24870866,24869094,24865301,24860973,24852575,24850597,24849802,24848025,24842862,24839938	24911228,24875817,24873799,24872959,24870889,24869147,24865450,24861036,24852618,24850722,24849950,24848154,24843554,24840775	Gene ID= ENSG00000111913.17 TPM= 3.86 Transcript Type= NA
chr6	25992662	26001775	25992662	26001775	+	ENST00000606723.2@U91328.2	ENST00000606723.2	lincRNA	25992662,25997903	25992918,26001775	Gene ID= ENSG00000272462.2 TPM= 5.79 Transcript Type= lincRNA
chr6	26055705	26056475	26055705	26056475	-	transcript693.chr6.nnic@NA	transcript693.chr6.nnic	NA	26055705	26056475	Gene ID= novel_gene_chr6_694 TPM= 165.07 Transcript Type= NA
chr6	26103876	26104310	26103876	26104310	+	ENST00000377803.3@HIST1H4C	ENST00000377803.3	protein_coding	26103876	26104310	Gene ID= ENSG00000197061.4 TPM= 15.44 Transcript Type= protein_coding
chr6	26114873	26123910	26114873	26123910	-	ENST00000314332.5@HIST1H2BC	ENST00000314332.5	protein_coding	26123515,26114873	26123910,26115135	Gene ID= ENSG00000180596.7 TPM= 2.9 Transcript Type= protein_coding
chr6	26124169	26139109	26124169	26139109	+	transcript704.chr6.nnic@HIST1H2AC	transcript704.chr6.nnic	protein_coding	26124169,26127698,26138054	26124749,26127761,26139109	Gene ID= ENSG00000180573.9 TPM= 2.9 Transcript Type= NA
chr6	26124145	26139116	26124145	26139116	+	ENST00000314088.6@HIST1H2AC	ENST00000314088.6	protein_coding	26124145,26138054	26124749,26139116	Gene ID= ENSG00000180573.9 TPM= 25.1 Transcript Type= nonsense_mediated_decay
chr6	26124203	26139084	26124203	26139084	+	ENST00000602637.1@HIST1H2AC	ENST00000602637.1	protein_coding	26124203,26138054	26124633,26139084	Gene ID= ENSG00000180573.9 TPM= 5.79 Transcript Type= protein_coding
chr6	26158146	26171349	26158146	26171349	+	ENST00000289316.2@HIST1H2BD	ENST00000289316.2	protein_coding	26158146,26170975	26158559,26171349	Gene ID= ENSG00000158373.8 TPM= 1.93 Transcript Type= protein_coding
chr6	26224178	26227469	26224178	26227469	+	transcript716.chr6.nnic@HIST1H3E	transcript716.chr6.nnic	protein_coding	26224178,26224902,26227312	26224305,26227168,26227469	Gene ID= ENSG00000274750.2 TPM= 3.86 Transcript Type= NA
chr6	26276993	26279837	26276993	26279837	-	transcript725.chr6.nnic@NA	transcript725.chr6.nnic	NA	26276993	26279837	Gene ID= novel_gene_chr6_726 TPM= 2.9 Transcript Type= NA
chr6	26281050	26285532	26281050	26285532	-	transcript723.chr6.nnic@HIST1H4H	transcript723.chr6.nnic	protein_coding	26284669,26281050	26285532,26281587	Gene ID= ENSG00000158406.4 TPM= 2.9 Transcript Type= NA
chr6	26365159	26378320	26365159	26378320	+	ENST00000508906.6@BTN3A2	ENST00000508906.6	protein_coding	26365159,26367990,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375797	26365352,26368050,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26378320	Gene ID= ENSG00000186470.13 TPM= 1.93 Transcript Type= protein_coding
chr6	26457925	26469637	26457925	26469637	+	ENST00000312541.9@BTN2A1	ENST00000312541.9	protein_coding	26457925,26458607,26459481,26463244,26465185,26465953,26466062,26467948	26458142,26458718,26459828,26463525,26465406,26465973,26466088,26469637	Gene ID= ENSG00000112763.15 TPM= 5.47 Transcript Type= protein_coding
chr6	26457904	26469653	26457904	26469653	+	ENST00000541522.5@BTN2A1	ENST00000541522.5	protein_coding	26457904,26459481,26463244,26465185,26465953,26466062,26467948	26458142,26459828,26463525,26465406,26465973,26466088,26469653	Gene ID= ENSG00000112763.15 TPM= 2.58 Transcript Type= protein_coding
chr6	26457961	26469637	26457961	26469637	+	ENST00000429381.5@BTN2A1	ENST00000429381.5	protein_coding	26457961,26458607,26459481,26463244,26465185,26465953,26466062,26467719	26458142,26458718,26459828,26463525,26465406,26465973,26466088,26469637	Gene ID= ENSG00000112763.15 TPM= 9.33 Transcript Type= protein_coding
chr6	26521739	26524420	26521739	26524420	+	transcript740.chr6.nnic@NA	transcript740.chr6.nnic	NA	26521739	26524420	Gene ID= novel_gene_chr6_741 TPM= 4.83 Transcript Type= NA
chr6	26538394	26546928	26538394	26546928	+	transcript742.chr6.nnic@HMGN4	transcript742.chr6.nnic	protein_coding	26538394,26539901,26545127	26538501,26540026,26546928	Gene ID= ENSG00000182952.4 TPM= 4.83 Transcript Type= NA
chr6	26596955	26599141	26596955	26599141	+	transcript746.chr6.nnic@ABT1	transcript746.chr6.nnic	protein_coding	26596955,26598265	26597223,26599141	Gene ID= ENSG00000146109.4 TPM= 3.86 Transcript Type= NA
chr6	26634383	26659752	26634383	26659752	-	ENST00000415922.6@ZNF322	ENST00000415922.6	protein_coding	26659441,26658558,26643659,26634383	26659752,26658646,26643728,26638728	Gene ID= ENSG00000181315.10 TPM= 6.76 Transcript Type= protein_coding
chr6	27133042	27135291	27133042	27135291	+	ENST00000359193.3@HIST1H2AG	ENST00000359193.3	protein_coding	27133042	27135291	Gene ID= ENSG00000196787.3 TPM= 2.9 Transcript Type= protein_coding
chr6	27450743	27473118	27450743	27473118	-	ENST00000211936.10@ZNF184	ENST00000211936.10	protein_coding	27472973,27472288,27467853,27457283,27456826,27450743	27473118,27472433,27467920,27457409,27456921,27453260	Gene ID= ENSG00000096654.15 TPM= 3.86 Transcript Type= protein_coding
chr6	27450820	27473109	27450820	27473109	-	transcript756.chr6.nnic@ZNF184	transcript756.chr6.nnic	protein_coding	27472729,27472288,27467853,27457283,27456826,27450820	27473109,27472433,27467920,27457409,27456921,27453260	Gene ID= ENSG00000096654.15 TPM= 6.76 Transcript Type= NA
chr6	28078792	28081130	28078792	28081130	-	ENST00000605945.1@AL121944.1	ENST00000605945.1	antisense_RNA	28080626,28078792	28081130,28078972	Gene ID= ENSG00000272009.1 TPM= 8.69 Transcript Type= antisense_RNA
chr6	28124560	28130082	28124560	28130082	+	ENST00000340487.4@ZSCAN16	ENST00000340487.4	protein_coding	28124560,28125413,28126783,28129430	28124677,28125830,28126921,28130082	Gene ID= ENSG00000196812.4 TPM= 1.93 Transcript Type= protein_coding
chr6	28225240	28226801	28225240	28226801	+	transcript773.chr6.nnic@NA	transcript773.chr6.nnic	NA	28225240	28226801	Gene ID= novel_gene_chr6_774 TPM= 1.93 Transcript Type= NA
chr6	28241009	28243915	28241009	28243915	-	transcript775.chr6.nnic@NA	transcript775.chr6.nnic	NA	28241009	28243915	Gene ID= novel_gene_chr6_776 TPM= 1.93 Transcript Type= NA
chr6	28267130	28277530	28267130	28277530	+	transcript777.chr6.nnic@ZSCAN26	transcript777.chr6.nnic	protein_coding	28267130,28271854,28272022,28272670,28276195	28267213,28271934,28272339,28272787,28277530	Gene ID= ENSG00000197062.11 TPM= 1.93 Transcript Type= NA
chr6	28267010	28278221	28267010	28278221	+	ENST00000421553.6@ZSCAN26	ENST00000421553.6	protein_coding	28267010,28271854,28272670,28276195	28267213,28272339,28272787,28278221	Gene ID= ENSG00000197062.11 TPM= 2.9 Transcript Type= protein_coding
chr6	28903002	28924013	28903002	28924013	-	transcript791.chr6.nic@TRIM27	transcript791.chr6.nic	protein_coding	28923213,28921892,28920012,28911696,28908973,28908808,28907492,28907236,28903002	28924013,28921987,28920242,28911718,28909088,28908840,28907563,28907262,28904665	Gene ID= ENSG00000204713.10 TPM= 2.17 Transcript Type= NA
chr6	28903008	28924013	28903008	28924013	-	transcript792.chr6.nnic@TRIM27	transcript792.chr6.nnic	protein_coding	28923213,28921892,28920012,28911696,28908973,28908808,28907236,28904554,28903008	28924013,28921987,28920242,28911718,28909088,28908840,28907262,28904665,28903898	Gene ID= ENSG00000204713.10 TPM= 7.96 Transcript Type= NA
chr6	28912783	28923707	28912783	28923707	-	transcript801.chr6.nnic@TRIM27	transcript801.chr6.nnic	protein_coding	28923213,28921892,28920012,28912783	28923707,28921987,28920242,28913252	Gene ID= ENSG00000204713.10 TPM= 1.93 Transcript Type= NA
chr6	28903002	28923989	28903002	28923989	-	ENST00000377199.3@TRIM27	ENST00000377199.3	protein_coding	28923213,28921892,28920012,28911696,28908973,28908808,28907236,28903002	28923989,28921987,28920242,28911718,28909088,28908840,28907262,28904665	Gene ID= ENSG00000204713.10 TPM= 34.99 Transcript Type= protein_coding
chr6	29888138	29891071	29888138	29891071	+	transcript817.chr6.nnic@HLA-H	transcript817.chr6.nnic	unprocessed_pseudogene	29888138,29888467,29889328,29889707,29890264,29890439,29890653	29888224,29888742,29889604,29889823,29890296,29890485,29891071	Gene ID= ENSG00000206341.7 TPM= 2.9 Transcript Type= NA
chr6	29942245	29945884	29942245	29945884	+	ENST00000376806.9@HLA-A	ENST00000376806.9	protein_coding	29942245,29942757,29943268,29944122,29944500,29945059,29945234,29945451	29942626,29943026,29943543,29944397,29944634,29945091,29945281,29945884	Gene ID= ENSG00000206503.12 TPM= 17.38 Transcript Type= protein_coding
chr6	30061257	30064909	30061257	30064909	+	ENST00000376782.6@ZNRD1	ENST00000376782.6	protein_coding	30061257,30061515,30061917,30062224,30064673	30061389,30061669,30062017,30062333,30064909	Gene ID= ENSG00000066379.14 TPM= 2.75 Transcript Type= protein_coding
chr6	30061263	30064909	30061263	30064909	+	ENST00000376785.2@ZNRD1	ENST00000376785.2	protein_coding	30061263,30061515,30061917,30062224,30064673	30061413,30061669,30062017,30062333,30064909	Gene ID= ENSG00000066379.14 TPM= 1.79 Transcript Type= protein_coding
chr6	30061259	30064909	30061259	30064909	+	ENST00000359374.8@ZNRD1	ENST00000359374.8	protein_coding	30061259,30061515,30061917,30062224,30064673	30061398,30061669,30062017,30062333,30064909	Gene ID= ENSG00000066379.14 TPM= 2.75 Transcript Type= protein_coding
chr6	30061254	30064909	30061254	30064909	+	ENST00000332435.9@ZNRD1	ENST00000332435.9	protein_coding	30061254,30061917,30062224,30064673	30061669,30062017,30062333,30064909	Gene ID= ENSG00000066379.14 TPM= 13.37 Transcript Type= protein_coding
chr6	30061265	30064909	30061265	30064909	+	transcript838.chr6.nic@ZNRD1	transcript838.chr6.nic	protein_coding	30061265,30062224,30064673	30061669,30062333,30064909	Gene ID= ENSG00000066379.14 TPM= 2.51 Transcript Type= NA
chr6	30067088	30070333	30067088	30070333	+	ENST00000376772.7@PPP1R11	ENST00000376772.7	protein_coding	30067088,30068590,30069104	30067479,30068698,30070333	Gene ID= ENSG00000204619.7 TPM= 65.64 Transcript Type= protein_coding
chr6	30184455	30213404	30184455	30213404	-	transcript846.chr6.nnic@TRIM26	transcript846.chr6.nnic	protein_coding	30213305,30204656,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184455	30213404,30204765,30201123,30199153,30198524,30196746,30190035,30189533,30189199,30186558	Gene ID= ENSG00000234127.8 TPM= 4.51 Transcript Type= NA
chr6	30184455	30213427	30184455	30213427	-	ENST00000453195.5@TRIM26	ENST00000453195.5	protein_coding	30213305,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184455	30213427,30201138,30199153,30198524,30196746,30190035,30189533,30189199,30186558	Gene ID= ENSG00000234127.8 TPM= 11.27 Transcript Type= protein_coding
chr6	30291375	30326866	30291375	30326866	-	ENST00000412685.6@HCG18	ENST00000412685.6	antisense_RNA	30326354,30314269,30296132,30294471,30291375	30326866,30314482,30296237,30294964,30292599	Gene ID= ENSG00000231074.8 TPM= 1.93 Transcript Type= antisense_RNA
chr6	30295008	30327151	30295008	30327151	-	transcript884.chr6.nnic@HCG18	transcript884.chr6.nnic	antisense_RNA	30326354,30296132,30295008	30327151,30296237,30295496	Gene ID= ENSG00000231074.8 TPM= 1.93 Transcript Type= NA
chr6	30326844	30343728	30326844	30343728	+	ENST00000376656.8@TRIM39	ENST00000376656.8	protein_coding	30326844,30328889,30329311,30330781,30335745,30339908,30340272,30340505,30341712	30326995,30329041,30329770,30330876,30335975,30339930,30340361,30340620,30343728	Gene ID= ENSG00000204599.14 TPM= 2.12 Transcript Type= protein_coding
chr6	30326920	30343729	30326920	30343729	+	ENST00000396548.5@TRIM39	ENST00000396548.5	protein_coding	30326920,30327652,30328909,30329311,30330781,30335745,30339908,30340505,30341712	30326995,30327696,30329041,30329770,30330876,30335975,30339930,30340620,30343729	Gene ID= ENSG00000204599.14 TPM= 2.12 Transcript Type= protein_coding
chr6	30326524	30343728	30326524	30343728	+	transcript863.chr6.nic@TRIM39	transcript863.chr6.nic	protein_coding	30326524,30328909,30329311,30330781,30335745,30339908,30340505,30341712	30326995,30329041,30329770,30330876,30335975,30339930,30340620,30343728	Gene ID= ENSG00000204599.14 TPM= 10.81 Transcript Type= NA
chr6	30326525	30343728	30326525	30343728	+	transcript866.chr6.nic@TRIM39	transcript866.chr6.nic	protein_coding	30326525,30328889,30329311,30330781,30335745,30339908,30340505,30341712	30326887,30329041,30329770,30330876,30335975,30339930,30340620,30343728	Gene ID= ENSG00000204599.14 TPM= 5.02 Transcript Type= NA
chr6	30326844	30343729	30326844	30343729	+	ENST00000396551.7@TRIM39	ENST00000396551.7	protein_coding	30326844,30328889,30329311,30330781,30335745,30339908,30340505,30341712	30326995,30329041,30329770,30330876,30335975,30339930,30340620,30343729	Gene ID= ENSG00000204599.14 TPM= 11.78 Transcript Type= protein_coding
chr6	30326902	30339066	30326902	30339066	+	transcript873.chr6.nic@TRIM39	transcript873.chr6.nic	protein_coding	30326902,30328889,30329311,30330781,30335745	30326995,30329041,30329770,30330876,30339066	Gene ID= ENSG00000204599.14 TPM= 1.93 Transcript Type= NA
chr6	30345159	30346857	30345159	30346857	+	ENST00000428040.6@RPP21	ENST00000428040.6	protein_coding	30345159,30345491,30346432,30346713	30345398,30345573,30346557,30346857	Gene ID= ENSG00000241370.5 TPM= 7.72 Transcript Type= protein_coding
chr6	30489467	30494205	30489467	30494205	+	ENST00000376630.4@HLA-E	ENST00000376630.4	protein_coding	30489467,30489726,30490240,30491137,30491537,30492404,30492541,30492749	30489595,30489995,30490515,30491412,30491653,30492436,30492583,30494205	Gene ID= ENSG00000204592.8 TPM= 159.28 Transcript Type= protein_coding
chr6	30545964	30556084	30545964	30556084	-	transcript902.chr6.nic@GNL1	transcript902.chr6.nic	protein_coding	30555555,30555055,30554764,30554575,30553350,30553084,30552467,30547352,30547112,30546696,30545964	30556084,30555191,30554915,30554646,30553557,30553179,30552661,30547530,30547274,30546836,30546313	Gene ID= ENSG00000204590.12 TPM= 6.76 Transcript Type= NA
chr6	30571376	30591532	30571376	30591532	+	ENST00000326195.12@ABCF1	ENST00000326195.12	protein_coding	30571376,30577409,30577818,30578076,30578348,30578470,30579931,30580406,30582394,30583066,30583608,30583805,30584192,30584418,30585260,30585558,30585879,30586134,30586474,30586641,30589688,30589806,30590149,30590306,30590535	30571560,30577455,30577913,30578202,30578385,30578577,30580005,30580519,30582507,30583188,30583708,30583890,30584331,30584566,30585343,30585682,30585991,30586305,30586548,30586711,30589720,30589974,30590213,30590378,30591532	Gene ID= ENSG00000204574.12 TPM= 38.61 Transcript Type= protein_coding
chr6	30593257	30594205	30593257	30594205	-	transcript928.chr6.nnic@NA	transcript928.chr6.nnic	NA	30593257	30594205	Gene ID= novel_gene_chr6_929 TPM= 1.93 Transcript Type= NA
chr6	30600400	30617244	30600400	30617244	-	ENST00000376511.6@PPP1R10	ENST00000376511.6	protein_coding	30617224,30616478,30609838,30609077,30608779,30607840,30606779,30606468,30606138,30605923,30604994,30604588,30604353,30604008,30603780,30603472,30603210,30602846,30601936,30600400	30617244,30616998,30609955,30609163,30608914,30607891,30606856,30606641,30606243,30606035,30605094,30604735,30604511,30604254,30603843,30603666,30603285,30602959,30602691,30601658	Gene ID= ENSG00000204569.9 TPM= 6.76 Transcript Type= protein_coding
chr6	30615553	30617246	30615553	30617246	-	transcript951.chr6.nic@PPP1R10	transcript951.chr6.nic	protein_coding	30617224,30615553	30617246,30616998	Gene ID= ENSG00000204569.9 TPM= 4.83 Transcript Type= NA
chr6	30617709	30626395	30617709	30626395	+	ENST00000259873.4@MRPS18B	ENST00000259873.4	protein_coding	30617709,30619493,30619709,30619921,30622832,30624883,30625502	30617943,30619601,30619806,30619989,30622898,30624942,30626395	Gene ID= ENSG00000204568.11 TPM= 240.85 Transcript Type= protein_coding
chr6	30626886	30644679	30626886	30644679	+	ENST00000329992.12@ATAT1	ENST00000329992.12	protein_coding	30626886,30627460,30627636,30627851,30628032,30628329,30640377,30640535,30642176,30642768,30643529	30626992,30627520,30627727,30627911,30628145,30628430,30640422,30640603,30642247,30643011,30644679	Gene ID= ENSG00000137343.17 TPM= 2.9 Transcript Type= protein_coding
chr6	30647033	30650400	30647033	30650400	+	transcript950.chr6.nic@C6orf136	transcript950.chr6.nic	protein_coding	30647033,30649558	30647846,30650400	Gene ID= ENSG00000204564.11 TPM= 3.21 Transcript Type= NA
chr6	30647055	30653109	30647055	30653109	+	ENST00000488383.5@C6orf136	ENST00000488383.5	protein_coding	30647055,30649558,30650994,30651266,30652648,30652802	30647303,30649959,30651100,30651466,30652717,30653109	Gene ID= ENSG00000204564.11 TPM= 18.66 Transcript Type= nonsense_mediated_decay
chr6	30647421	30653109	30647421	30653109	+	ENST00000446773.6@C6orf136	ENST00000446773.6	protein_coding	30647421,30649558,30650994,30651266,30652648,30652802	30647846,30649959,30651082,30651466,30652717,30653109	Gene ID= ENSG00000204564.11 TPM= 18.66 Transcript Type= protein_coding
chr6	30653119	30673037	30653119	30673037	-	ENST00000376442.7@DHX16	ENST00000376442.7	protein_coding	30672635,30671036,30670790,30670410,30665479,30665071,30664801,30662911,30662627,30660032,30659736,30659472,30656952,30656597,30656391,30656198,30655435,30655175,30654706,30653119	30673037,30671274,30670952,30670466,30665733,30665274,30664992,30663021,30662742,30660242,30659834,30659624,30657092,30656759,30656509,30656265,30655597,30655336,30654879,30653370	Gene ID= ENSG00000204560.9 TPM= 85.91 Transcript Type= protein_coding
chr6	30676389	30687895	30676389	30687895	-	ENST00000274853.7@PPP1R18	ENST00000274853.7	protein_coding	30684408,30679179,30676389	30687895,30679389,30677288	Gene ID= ENSG00000146112.11 TPM= 9.65 Transcript Type= protein_coding
chr6	30720201	30725426	30720201	30725426	+	ENST00000327892.12@TUBB	ENST00000327892.12	protein_coding	30720201,30722537,30722918,30723340	30720563,30722645,30723028,30725426	Gene ID= ENSG00000196230.12 TPM= 612.97 Transcript Type= protein_coding
chr6	30727830	30742740	30727830	30742740	-	transcript981.chr6.nnic@FLOT1	transcript981.chr6.nnic	protein_coding	30742527,30742147,30741792,30741614,30740679,30740496,30740158,30730919,30730682,30730428,30730022,30727830	30742740,30742203,30741867,30741704,30740798,30740591,30740310,30731100,30730727,30730565,30730186,30728145	Gene ID= ENSG00000137312.14 TPM= 16.41 Transcript Type= NA
chr6	30727709	30742733	30727709	30742733	-	ENST00000376389.7@FLOT1	ENST00000376389.7	protein_coding	30742527,30742147,30741792,30741614,30741190,30740679,30740496,30740158,30730919,30730682,30730428,30730022,30727709	30742733,30742203,30741867,30741704,30741333,30740798,30740591,30740310,30731100,30730727,30730565,30730186,30728145	Gene ID= ENSG00000137312.14 TPM= 34.75 Transcript Type= protein_coding
chr6	30884509	30900156	30884509	30900156	+	transcript1000.chr6.nic@DDR1	transcript1000.chr6.nic	protein_coding	30884509,30885625,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30896621,30897014,30897379,30898073,30898888,30899156	30884710,30885680,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30896865,30897141,30897597,30898307,30899037,30900156	Gene ID= ENSG00000204580.13 TPM= 14.96 Transcript Type= NA
chr6	30884069	30900156	30884069	30900156	+	ENST00000376569.7@DDR1	ENST00000376569.7	protein_coding	30884069,30884538,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30896621,30897014,30897379,30898073,30898888,30899156	30884145,30884710,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30896865,30897141,30897597,30898307,30899037,30900156	Gene ID= ENSG00000204580.13 TPM= 20.75 Transcript Type= protein_coding
chr6	30914240	30926459	30914240	30926459	+	transcript1004.chr6.nic@VARS2	transcript1004.chr6.nic	protein_coding	30914240,30914805,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30914344,30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926459	Gene ID= ENSG00000137411.16 TPM= 13.51 Transcript Type= NA
chr6	30914240	30926459	30914240	30926459	+	transcript1006.chr6.nnic@VARS2	transcript1006.chr6.nnic	protein_coding	30914240,30914805,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30924354,30925274,30925544,30925880,30926109	30914344,30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30924560,30925385,30925719,30926008,30926459	Gene ID= ENSG00000137411.16 TPM= 2.9 Transcript Type= NA
chr6	30914205	30926459	30914205	30926459	+	ENST00000321897.9@VARS2	ENST00000321897.9	protein_coding	30914205,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926459	Gene ID= ENSG00000137411.16 TPM= 7.72 Transcript Type= protein_coding
chr6	30914331	30926413	30914331	30926413	+	ENST00000541562.5@VARS2	ENST00000541562.5	protein_coding	30914331,30914805,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30914469,30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926413	Gene ID= ENSG00000137411.16 TPM= 1.93 Transcript Type= protein_coding
chr6	31142439	31158238	31142439	31158238	-	ENST00000376266.9@CCHCR1	ENST00000376266.9	protein_coding	31158167,31157023,31156731,31154496,31150959,31150725,31150455,31150066,31148618,31148405,31145696,31145448,31145166,31144885,31144687,31143262,31142963,31142439	31158238,31157089,31156944,31154799,31151122,31150860,31150565,31150215,31148728,31148511,31145808,31145493,31145302,31145073,31144788,31143413,31143134,31142716	Gene ID= ENSG00000204536.13 TPM= 9.17 Transcript Type= protein_coding
chr6	31142439	31158220	31142439	31158220	-	transcript1015.chr6.nic@CCHCR1	transcript1015.chr6.nic	protein_coding	31158167,31156731,31154496,31150959,31150725,31150455,31150066,31148618,31148405,31145696,31145448,31145166,31144885,31144687,31143262,31142963,31142439	31158220,31156944,31154799,31151122,31150860,31150565,31150215,31148728,31148511,31145808,31145493,31145302,31145073,31144788,31143413,31143134,31142716	Gene ID= ENSG00000204536.13 TPM= 3.38 Transcript Type= NA
chr6	31158589	31164215	31158589	31164215	+	transcript1020.chr6.nnic@TCF19	transcript1020.chr6.nnic	protein_coding	31158589,31159143,31161447,31161793,31162477	31158722,31159707,31161577,31162005,31164215	Gene ID= ENSG00000137310.11 TPM= 1.93 Transcript Type= NA
chr6	31195200	31198037	31195200	31198037	-	ENST00000606367.1@AL662844.4	ENST00000606367.1	antisense_RNA	31195200	31198037	Gene ID= ENSG00000272501.1 TPM= 23.17 Transcript Type= antisense_RNA
chr6	31268749	31272092	31268749	31272092	-	transcript1025.chr6.nic@HLA-C	transcript1025.chr6.nic	protein_coding	31271999,31271073,31270210,31269966,31269493,31269338,31268749	31272092,31271868,31270485,31270085,31269525,31269385,31269173	Gene ID= ENSG00000204525.16 TPM= 16.25 Transcript Type= NA
chr6	31268749	31272146	31268749	31272146	-	transcript1026.chr6.nnic@HLA-C	transcript1026.chr6.nnic	protein_coding	31271999,31271599,31271073,31270210,31269493,31269338,31268749	31272146,31271868,31271348,31270485,31269525,31269385,31269173	Gene ID= ENSG00000204525.16 TPM= 10.45 Transcript Type= NA
chr6	31268749	31272086	31268749	31272086	-	ENST00000376228.9@HLA-C	ENST00000376228.9	protein_coding	31271999,31271599,31271073,31270210,31269966,31269493,31269338,31268749	31272086,31271868,31271348,31270485,31270085,31269525,31269385,31269173	Gene ID= ENSG00000204525.16 TPM= 93.95 Transcript Type= protein_coding
chr6	31353872	31357187	31353872	31357187	-	ENST00000412585.6@HLA-B	ENST00000412585.6	protein_coding	31357086,31356688,31356167,31355317,31355107,31354633,31354479,31353872	31357187,31356957,31356442,31355592,31355223,31354665,31354526,31354296	Gene ID= ENSG00000234745.10 TPM= 84.95 Transcript Type= protein_coding
chr6	31399784	31415313	31399784	31415313	+	ENST00000616296.4@MICA	ENST00000616296.4	protein_coding	31399784,31410543,31411072,31411947,31412325,31415012	31400783,31410797,31411359,31412225,31412460,31415313	Gene ID= ENSG00000204520.12 TPM= 1.45 Transcript Type= protein_coding
chr6	31403579	31415315	31403579	31415315	+	ENST00000449934.6@MICA	ENST00000449934.6	protein_coding	31403579,31410543,31411072,31411947,31412325,31415012	31403702,31410797,31411359,31412225,31412460,31415315	Gene ID= ENSG00000204520.12 TPM= 4.34 Transcript Type= protein_coding
chr6	31530219	31542448	31530219	31542448	-	ENST00000458640.5@DDX39B	ENST00000458640.5	protein_coding	31541950,31540322,31539147,31538763,31536500,31535367,31532780,31531296,31531053,31530779,31530219	31542448,31540534,31539274,31538855,31536683,31535485,31532911,31531405,31531197,31530926,31530450	Gene ID= ENSG00000198563.13 TPM= 67.17 Transcript Type= protein_coding
chr6	31530219	31542004	31530219	31542004	-	transcript1039.chr6.nic@DDX39B	transcript1039.chr6.nic	protein_coding	31541950,31540322,31539147,31538763,31536500,31535367,31532780,31531296,31531053,31530779,31530219	31542004,31540566,31539274,31538855,31536683,31535485,31532911,31531405,31531197,31530926,31530450	Gene ID= ENSG00000198563.13 TPM= 7.96 Transcript Type= NA
chr6	31530219	31542079	31530219	31542079	-	transcript1042.chr6.nic@DDX39B	transcript1042.chr6.nic	protein_coding	31541950,31540322,31536500,31535367,31532780,31531296,31531053,31530779,31530219	31542079,31540534,31536683,31535485,31532911,31531405,31531197,31530926,31530450	Gene ID= ENSG00000198563.13 TPM= 5.07 Transcript Type= NA
chr6	31530219	31542017	31530219	31542017	-	ENST00000462256.5@DDX39B	ENST00000462256.5	protein_coding	31541950,31540322,31539147,31538763,31536500,31532780,31531296,31531053,31530779,31530219	31542017,31540534,31539274,31538855,31536683,31535485,31531405,31531197,31530926,31530450	Gene ID= ENSG00000198563.13 TPM= 12.87 Transcript Type= retained_intron
chr6	31547581	31558829	31547581	31558829	+	ENST00000376148.8@NFKBIL1	ENST00000376148.8	protein_coding	31547581,31548163,31557628,31558022	31547751,31548439,31557849,31558829	Gene ID= ENSG00000204498.10 TPM= 33.79 Transcript Type= protein_coding
chr6	31547613	31558829	31547613	31558829	+	ENST00000376145.8@NFKBIL1	ENST00000376145.8	protein_coding	31547613,31548163,31557628,31558022	31547751,31548439,31557804,31558829	Gene ID= ENSG00000204498.10 TPM= 6.76 Transcript Type= protein_coding
chr6	31580555	31582427	31580555	31582427	-	ENST00000446745.2@LTB	ENST00000446745.2	protein_coding	31582256,31581559,31580555	31582427,31581630,31581163	Gene ID= ENSG00000227507.2 TPM= 1.93 Transcript Type= protein_coding
chr6	31615184	31617021	31615184	31617021	+	ENST00000376059.7@AIF1	ENST00000376059.7	protein_coding	31615184,31615521,31615670,31616104,31616344,31616816	31615354,31615582,31615736,31616145,31616506,31617021	Gene ID= ENSG00000204472.12 TPM= 3.86 Transcript Type= protein_coding
chr6	31639028	31652705	31639028	31652705	-	ENST00000211379.9@BAG6	ENST00000211379.9	protein_coding	31652424,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639500,31639028	31652705,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639646,31639226	Gene ID= ENSG00000204463.12 TPM= 62.75 Transcript Type= protein_coding
chr6	31639029	31652700	31639029	31652700	-	ENST00000362049.10@BAG6	ENST00000362049.10	protein_coding	31652424,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639029	31652700,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639226	Gene ID= ENSG00000204463.12 TPM= 26.06 Transcript Type= protein_coding
chr6	31658298	31660772	31658298	31660772	-	ENST00000375911.1@C6orf47	ENST00000375911.1	protein_coding	31658298	31660772	Gene ID= ENSG00000204439.3 TPM= 91.7 Transcript Type= protein_coding
chr6	31661229	31666283	31661229	31666283	-	ENST00000375906.5@GPANK1	ENST00000375906.5	protein_coding	31665861,31664841,31663853,31661229	31666283,31665003,31664577,31662710	Gene ID= ENSG00000204438.10 TPM= 5.15 Transcript Type= protein_coding
chr6	31662076	31665861	31662076	31665861	-	ENST00000375900.8@GPANK1	ENST00000375900.8	protein_coding	31665574,31664841,31663853,31662076	31665861,31665003,31664580,31662710	Gene ID= ENSG00000204438.10 TPM= 18.66 Transcript Type= protein_coding
chr6	31662076	31665850	31662076	31665850	-	ENST00000375895.6@GPANK1	ENST00000375895.6	protein_coding	31665574,31664841,31663853,31662076	31665850,31665003,31664577,31662710	Gene ID= ENSG00000204438.10 TPM= 13.83 Transcript Type= protein_coding
chr6	31666064	31670070	31666064	31670070	+	ENST00000375882.6@CSNK2B	ENST00000375882.6	protein_coding	31666064,31666821,31667868,31668539,31669097,31669319,31669836	31666208,31666903,31667970,31668654,31669172,31669508,31670070	Gene ID= ENSG00000204435.13 TPM= 118.25 Transcript Type= protein_coding
chr6	31676700	31681476	31676700	31681476	-	ENST00000474395.5@LY6G5C	ENST00000474395.5	protein_coding	31681230,31679101,31676700	31681476,31679268,31677120	Gene ID= ENSG00000204428.12 TPM= 1.93 Transcript Type= processed_transcript
chr6	31686949	31703444	31686949	31703444	-	ENST00000395952.7@ABHD16A	ENST00000395952.7	protein_coding	31703150,31702074,31701274,31700942,31696948,31693359,31693027,31691804,31691579,31690539,31690078,31689581,31689015,31688723,31688249,31688041,31687824,31687642,31687498,31686949	31703444,31702130,31701340,31701028,31697033,31693432,31693149,31691918,31691680,31690602,31690127,31689704,31689119,31688786,31688305,31688103,31687900,31687740,31687544,31687295	Gene ID= ENSG00000204427.11 TPM= 87.84 Transcript Type= protein_coding
chr6	31727038	31730617	31727038	31730617	-	ENST00000375792.7@DDAH2	ENST00000375792.7	protein_coding	31730051,31728865,31728646,31728451,31728173,31727543,31727038	31730617,31729225,31728745,31728524,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 16.41 Transcript Type= protein_coding
chr6	31727038	31729792	31727038	31729792	-	ENST00000375789.6@DDAH2	ENST00000375789.6	protein_coding	31728865,31728646,31728451,31728173,31727543,31727038	31729792,31728745,31728524,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 4.83 Transcript Type= protein_coding
chr6	31727038	31730270	31727038	31730270	-	transcript1098.chr6.nic@DDAH2	transcript1098.chr6.nic	protein_coding	31730051,31728865,31728646,31728173,31727543,31727038	31730270,31729225,31728745,31728524,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 1.93 Transcript Type= NA
chr6	31730583	31736545	31730583	31736545	-	ENST00000616760.1@CLIC1	ENST00000616760.1	protein_coding	31736483,31736262,31734154,31733836,31733566,31732217,31730583	31736545,31736350,31734263,31733961,31733672,31732398,31731003	Gene ID= ENSG00000213719.8 TPM= 23.65 Transcript Type= protein_coding
chr6	31730581	31736567	31730581	31736567	-	ENST00000375784.7@CLIC1	ENST00000375784.7	protein_coding	31736262,31734154,31733836,31733566,31732217,31730581	31736567,31734263,31733961,31733672,31732398,31731003	Gene ID= ENSG00000213719.8 TPM= 16.89 Transcript Type= protein_coding
chr6	31777518	31795953	31777518	31795953	-	ENST00000375663.7@VARS	ENST00000375663.7	protein_coding	31795546,31794831,31792986,31792757,31792392,31792217,31791871,31791610,31785569,31785246,31784595,31784394,31784214,31783096,31782721,31782530,31782285,31782087,31781847,31781691,31781481,31781019,31780870,31780705,31780441,31779998,31779608,31779425,31778967,31777518	31795953,31795250,31793120,31792895,31792516,31792301,31791971,31791737,31785733,31785327,31784714,31784502,31784308,31783186,31782845,31782633,31782443,31782177,31781952,31781761,31781606,31781123,31780938,31780783,31780568,31780153,31779814,31779536,31779292,31777662	Gene ID= ENSG00000204394.12 TPM= 142.7 Transcript Type= protein_coding
chr6	31777518	31795733	31777518	31795733	-	transcript1102.chr6.nnic@VARS	transcript1102.chr6.nnic	protein_coding	31795546,31794831,31792986,31792757,31792392,31792217,31791871,31791610,31785569,31785246,31784595,31784394,31783096,31782721,31782530,31782285,31782087,31781847,31781691,31781481,31781019,31780870,31780705,31780441,31779998,31779608,31779425,31778967,31777518	31795733,31795250,31793120,31792895,31792516,31792301,31791971,31791737,31785733,31785327,31784714,31784502,31783186,31782845,31782633,31782443,31782177,31781952,31781761,31781606,31781123,31780938,31780783,31780568,31780153,31779814,31779536,31779292,31777662	Gene ID= ENSG00000204394.12 TPM= 20.11 Transcript Type= NA
chr6	31797396	31806984	31797396	31806984	-	ENST00000375661.5@LSM2	ENST00000375661.5	protein_coding	31806755,31806075,31798477,31797990,31797396	31806984,31806142,31798507,31798049,31797882	Gene ID= ENSG00000204392.10 TPM= 29.92 Transcript Type= protein_coding
chr6	31815464	31817946	31815464	31817946	+	ENST00000375651.6@HSPA1A	ENST00000375651.6	protein_coding	31815464	31817946	Gene ID= ENSG00000204389.9 TPM= 823.41 Transcript Type= protein_coding
chr6	31827735	31830255	31827735	31830255	+	ENST00000375650.4@HSPA1B	ENST00000375650.4	protein_coding	31827735	31830255	Gene ID= ENSG00000204388.6 TPM= 285.73 Transcript Type= protein_coding
chr6	31834608	31839761	31834608	31839761	+	ENST00000375640.7@C6orf48	ENST00000375640.7	protein_coding	31834608,31835411,31837236,31839543	31835200,31835451,31837435,31839761	Gene ID= ENSG00000204387.12 TPM= 19.79 Transcript Type= protein_coding
chr6	31834908	31839761	31834908	31839761	+	ENST00000375638.7@C6orf48	ENST00000375638.7	protein_coding	31834908,31835411,31836424,31837236,31839543	31835200,31835451,31836517,31837435,31839761	Gene ID= ENSG00000204387.12 TPM= 9.17 Transcript Type= protein_coding
chr6	31859052	31862906	31859052	31862906	-	ENST00000375631.4@NEU1	ENST00000375631.4	protein_coding	31862618,31861999,31861188,31860439,31860042,31859052	31862906,31862191,31861450,31860621,31860264,31859945	Gene ID= ENSG00000204386.10 TPM= 34.75 Transcript Type= protein_coding
chr6	31879759	31886437	31879759	31886437	-	ENST00000494816.5@EHMT2	ENST00000494816.5	protein_coding	31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759	31886437,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264	Gene ID= ENSG00000204371.11 TPM= 1.28 Transcript Type= retained_intron
chr6	31889532	31897696	31889532	31897696	-	transcript1136.chr6.nic@EHMT2	transcript1136.chr6.nic	protein_coding	31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889532	31897696,31896989,31896824,31896516,31892910,31892734,31892562,31889602	Gene ID= ENSG00000204371.11 TPM= 1.93 Transcript Type= NA
chr6	31879759	31897684	31879759	31897684	-	ENST00000375537.8@EHMT2	ENST00000375537.8	protein_coding	31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888969,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759	31897684,31896989,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31889070,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264	Gene ID= ENSG00000204371.11 TPM= 7.56 Transcript Type= protein_coding
chr6	31879759	31897677	31879759	31897677	-	ENST00000375530.8@EHMT2	ENST00000375530.8	protein_coding	31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759	31897677,31896989,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264	Gene ID= ENSG00000204371.11 TPM= 4.66 Transcript Type= protein_coding
chr6	31927477	31945672	31927477	31945672	+	ENST00000299367.9@C2	ENST00000299367.9	protein_coding	31927477,31927955,31928732,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945178	31927798,31928164,31928917,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945672	Gene ID= ENSG00000166278.14 TPM= 3.86 Transcript Type= protein_coding
chr6	31927496	31945671	31927496	31945671	+	ENST00000442278.6@C2	ENST00000442278.6	protein_coding	31927496,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945178	31927798,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945671	Gene ID= ENSG00000166278.14 TPM= 1.93 Transcript Type= protein_coding
chr6	31945709	31952084	31945709	31952084	+	ENST00000425368.6@CFB	ENST00000425368.6	protein_coding	31945709,31946373,31947007,31947348,31947742,31947945,31948374,31948830,31949243,31949420,31950050,31950286,31950619,31950868,31951144,31951341,31951555,31951875	31946285,31946606,31947192,31947521,31947843,31948081,31948512,31948961,31949344,31949557,31950147,31950403,31950772,31950944,31951244,31951473,31951604,31952084	Gene ID= ENSG00000243649.8 TPM= 2.9 Transcript Type= protein_coding
chr6	31952087	31959110	31952087	31959110	-	ENST00000375429.7@NELFE	ENST00000375429.7	protein_coding	31958892,31958372,31956941,31956693,31955219,31955059,31954555,31954298,31954080,31953729,31952087	31959110,31958454,31957010,31956838,31955293,31955096,31954892,31954442,31954134,31953831,31952398	Gene ID= ENSG00000204356.13 TPM= 8.21 Transcript Type= protein_coding
chr6	31952228	31958962	31952228	31958962	-	ENST00000481121.5@NELFE	ENST00000481121.5	protein_coding	31958892,31958372,31956941,31956693,31955219,31955059,31954555,31954298,31953729,31952228	31958962,31958454,31957010,31956838,31955293,31955096,31954892,31954442,31954134,31952398	Gene ID= ENSG00000204356.13 TPM= 5.31 Transcript Type= retained_intron
chr6	31959080	31969755	31959080	31969755	+	ENST00000375394.6@SKIV2L	ENST00000375394.6	protein_coding	31959080,31959297,31960010,31960220,31960432,31960666,31961041,31961196,31961547,31961909,31962439,31962714,31962985,31963413,31963637,31963913,31964232,31965783,31966709,31967004,31967273,31967715,31967956,31968328,31968686,31968871,31969280,31969515	31959214,31959400,31960119,31960337,31960546,31960740,31961094,31961386,31961675,31962054,31962585,31962798,31963091,31963559,31963733,31964125,31964342,31966013,31966846,31967141,31967377,31967862,31968082,31968538,31968796,31969089,31969420,31969755	Gene ID= ENSG00000204351.11 TPM= 45.37 Transcript Type= protein_coding
chr6	31969810	31972292	31969810	31972292	-	ENST00000337523.9@DXO	ENST00000337523.9	protein_coding	31971929,31971320,31970912,31970606,31970343,31970109,31969810	31972292,31971681,31971147,31970825,31970478,31970203,31970024	Gene ID= ENSG00000204348.9 TPM= 1.93 Transcript Type= protein_coding
chr6	31969815	31972203	31969815	31972203	-	transcript1176.chr6.nnic@DXO	transcript1176.chr6.nnic	protein_coding	31971929,31971320,31970912,31970606,31970109,31969815	31972203,31971681,31971147,31970825,31970378,31970024	Gene ID= ENSG00000204348.9 TPM= 1.93 Transcript Type= NA
chr6	31969844	31971984	31969844	31971984	-	ENST00000375356.7@DXO	ENST00000375356.7	protein_coding	31971320,31970912,31970606,31970343,31970109,31969844	31971984,31971147,31970825,31970478,31970203,31970024	Gene ID= ENSG00000204348.9 TPM= 1.93 Transcript Type= protein_coding
chr6	31971091	31981446	31971091	31981446	+	ENST00000466132.5@STK19	ENST00000466132.5	protein_coding	31971091,31971869,31972621,31978903,31979414,31980451,31980654,31981004	31971274,31972511,31972757,31978998,31979553,31980548,31980801,31981446	Gene ID= ENSG00000204344.14 TPM= 8.21 Transcript Type= retained_intron
chr6	31972555	31981446	31972555	31981446	+	ENST00000491861.5@STK19	ENST00000491861.5	protein_coding	31972555,31978903,31979414,31980451,31980654,31981004	31972757,31978998,31979553,31980548,31980801,31981446	Gene ID= ENSG00000204344.14 TPM= 2.41 Transcript Type= retained_intron
chr6	31982024	32002681	31982024	32002681	+	ENST00000428956.6@C4A	ENST00000428956.6	protein_coding	31982024,31982305,31982718,31983129,31983278,31983585,31983838,31984073,31984276,31991192,31991407,31991732,31992047,31992386,31992796,31993090,31993425,31993714,31993916,31994245,31994498,31994952,31995105,31995330,31995719,31995955,31996207,31996429,31996829,31997144,31997705,31998814,31999005,31999306,31999487,32001053,32001321,32001496,32001777,32002123,32002399	31982172,31982503,31982919,31983199,31983366,31983667,31983934,31984178,31984408,31991307,31991586,31991914,31992232,31992544,31992922,31993164,31993622,31993825,31993986,31994384,31994707,31995003,31995194,31995539,31995794,31996111,31996323,31996600,31997061,31997311,31997764,31998907,31999191,31999396,31999561,32001155,32001410,32001594,32001860,32002255,32002681	Gene ID= ENSG00000244731.7 TPM= 6.76 Transcript Type= protein_coding
chr6	32014762	32035418	32014762	32035418	+	ENST00000435363.6@C4B	ENST00000435363.6	protein_coding	32014762,32015043,32015456,32015867,32016016,32016323,32016576,32016811,32017014,32023930,32024145,32024470,32024785,32025124,32025534,32025828,32026163,32026452,32026654,32026983,32027236,32027690,32027843,32028068,32028457,32028693,32028945,32029167,32029566,32029881,32030442,32031551,32031742,32032043,32032224,32033790,32034058,32034233,32034514,32034860,32035136	32014910,32015241,32015657,32015937,32016104,32016405,32016672,32016916,32017146,32024045,32024324,32024652,32024970,32025282,32025660,32025902,32026360,32026563,32026724,32027122,32027445,32027741,32027932,32028277,32028532,32028849,32029061,32029338,32029798,32030048,32030501,32031644,32031928,32032133,32032298,32033892,32034147,32034331,32034597,32034992,32035418	Gene ID= ENSG00000224389.8 TPM= 8.69 Transcript Type= protein_coding
chr6	32041154	32109374	32041154	32109374	-	ENST00000375244.7@TNXB	ENST00000375244.7	protein_coding	32109181,32097796,32095611,32095076,32089223,32088785,32085750,32084413,32082036,32081368,32079033,32073647,32071990,32070127,32069553,32068822,32068390,32067661,32064821,32062157,32061397,32058058,32056586,32055851,32053388,32052670,32049998,32049270,32048363,32047734,32046175,32045006,32044381,32044007,32043749,32043437,32043175,32042951,32042699,32042455,32042266,32042012,32041771,32041154	32109374,32098206,32097449,32095191,32089379,32089048,32086118,32084709,32082326,32081673,32079365,32073952,32072298,32070414,32069861,32069136,32068707,32067984,32065117,32062483,32061720,32058390,32056903,32056174,32053711,32052993,32050321,32049587,32048650,32048012,32046456,32045326,32044716,32044129,32043892,32043556,32043318,32043081,32042831,32042606,32042362,32042173,32041934,32041450	Gene ID= ENSG00000168477.17 TPM= 29.92 Transcript Type= protein_coding
chr6	32115264	32128240	32115264	32128240	-	ENST00000375203.7@ATF6B	ENST00000375203.7	protein_coding	32128117,32127671,32127442,32127103,32126117,32121263,32120989,32120771,32119824,32118956,32118775,32117859,32117587,32117323,32117037,32116704,32116480,32115264	32128240,32127750,32127520,32127194,32126252,32121348,32121124,32120902,32119957,32119141,32118866,32118038,32117694,32117404,32117107,32116815,32116564,32115968	Gene ID= ENSG00000213676.10 TPM= 2.9 Transcript Type= protein_coding
chr6	32120442	32128222	32120442	32128222	-	ENST00000495579.5@ATF6B	ENST00000495579.5	protein_coding	32128117,32127671,32127442,32127103,32126117,32121263,32120989,32120442	32128222,32127750,32127520,32127194,32126252,32121348,32121124,32120902	Gene ID= ENSG00000213676.10 TPM= 6.76 Transcript Type= retained_intron
chr6	32128707	32130291	32128707	32130291	-	ENST00000375156.3@FKBPL	ENST00000375156.3	protein_coding	32130095,32128707	32130291,32129854	Gene ID= ENSG00000204315.3 TPM= 6.76 Transcript Type= protein_coding
chr6	32152802	32154333	32152802	32154333	-	ENST00000485392.5@PRRT1	ENST00000485392.5	protein_coding	32154238,32153737,32152802	32154333,32153836,32153172	Gene ID= ENSG00000204314.10 TPM= 1.93 Transcript Type= processed_transcript
chr6	32154095	32163678	32154095	32163678	+	ENST00000375137.6@PPT2	ENST00000375137.6	protein_coding	32154095,32154587,32155030,32155688,32155871,32157637,32157840,32162568,32162807	32154394,32154777,32155183,32155783,32155978,32157720,32157924,32162622,32163678	Gene ID= ENSG00000221988.12 TPM= 5.79 Transcript Type= protein_coding
chr6	32168212	32176122	32168212	32176122	-	ENST00000375107.7@AGPAT1	ENST00000375107.7	protein_coding	32175814,32171297,32170937,32170425,32170165,32169966,32168212	32176122,32171505,32171070,32170600,32170260,32170038,32169448	Gene ID= ENSG00000204310.12 TPM= 31.86 Transcript Type= protein_coding
chr6	32168212	32177342	32168212	32177342	-	ENST00000490711.5@AGPAT1	ENST00000490711.5	protein_coding	32176510,32171297,32170165,32169966,32168212	32177342,32171505,32170260,32170038,32169448	Gene ID= ENSG00000204310.12 TPM= 7.72 Transcript Type= processed_transcript
chr6	32168212	32177080	32168212	32177080	-	ENST00000395499.5@AGPAT1	ENST00000395499.5	protein_coding	32176510,32171297,32170937,32170425,32170165,32169966,32168212	32177080,32171505,32171070,32170600,32170260,32170038,32169448	Gene ID= ENSG00000204310.12 TPM= 16.41 Transcript Type= protein_coding
chr6	32178354	32180793	32178354	32180793	+	ENST00000375094.3@RNF5	ENST00000375094.3	protein_coding	32178354,32179541,32179651,32179877,32180009,32180229	32178651,32179559,32179763,32179931,32180126,32180793	Gene ID= ENSG00000204308.7 TPM= 81.09 Transcript Type= protein_coding
chr6	32194843	32224067	32194843	32224067	-	ENST00000375023.3@NOTCH4	ENST00000375023.3	protein_coding	32223856,32223005,32222511,32220978,32220756,32220405,32220129,32219592,32217995,32217153,32216945,32215226,32214110,32213688,32213135,32212824,32212474,32210752,32204137,32203770,32202076,32201117,32200831,32198926,32198649,32198421,32197299,32196925,32196324,32194843	32224067,32223086,32222806,32221325,32220878,32220641,32220284,32219786,32218108,32217266,32217067,32215385,32214255,32213840,32213252,32212911,32212627,32210936,32204389,32203882,32202599,32201500,32201006,32199145,32198730,32198559,32197594,32197072,32196421,32196150	Gene ID= ENSG00000204301.6 TPM= 20.27 Transcript Type= protein_coding
chr6	32439842	32445046	32439842	32445046	+	ENST00000395388.6@HLA-DRA	ENST00000395388.6	protein_coding	32439842,32442448,32443185,32443756,32444652	32440032,32442693,32443466,32443921,32445046	Gene ID= ENSG00000204287.13 TPM= 24.13 Transcript Type= protein_coding
chr6	32578769	32589848	32578769	32589848	-	ENST00000360004.5@HLA-DRB1	ENST00000360004.5	protein_coding	32589643,32584109,32581557,32580746,32580247,32578769	32589848,32584378,32581838,32580856,32580270,32579104	Gene ID= ENSG00000196126.11 TPM= 77.22 Transcript Type= protein_coding
chr6	32825415	32838780	32825415	32838780	-	ENST00000374897.2@TAP2	ENST00000374897.2	protein_coding	32838653,32837741,32837537,32835643,32835154,32832627,32832333,32830618,32830267,32829930,32829400,32825415	32838780,32838237,32837651,32835773,32835359,32832824,32832461,32830806,32830440,32830089,32829536,32829034	Gene ID= ENSG00000204267.13 TPM= 2.9 Transcript Type= protein_coding
chr6	32840717	32844703	32840717	32844703	-	ENST00000374881.2@PSMB8	ENST00000374881.2	protein_coding	32844279,32842942,32842672,32842134,32841531,32840717	32844703,32843089,32842783,32842263,32841735,32841047	Gene ID= ENSG00000204264.8 TPM= 10.62 Transcript Type= protein_coding
chr6	32840717	32844047	32840717	32844047	-	ENST00000374882.7@PSMB8	ENST00000374882.7	protein_coding	32843850,32842942,32842672,32842134,32841531,32840717	32844047,32843089,32842783,32842263,32841735,32841047	Gene ID= ENSG00000204264.8 TPM= 18.34 Transcript Type= protein_coding
chr6	32854161	32859585	32854161	32859585	+	ENST00000374859.2@PSMB9	ENST00000374859.2	protein_coding	32854161,32856138,32857263,32858005,32858364,32859405	32854289,32856205,32857394,32858134,32858505,32859585	Gene ID= ENSG00000240065.7 TPM= 9.65 Transcript Type= protein_coding
chr6	32845209	32853978	32845209	32853978	-	ENST00000354258.4@TAP1	ENST00000354258.4	protein_coding	32853039,32852388,32852109,32850944,32850320,32848990,32848652,32847919,32847513,32847068,32845209	32853978,32852502,32852239,32851149,32850517,32849118,32848840,32848092,32847675,32847204,32845785	Gene ID= ENSG00000168394.10 TPM= 55.02 Transcript Type= protein_coding
chr6	32934629	32941070	32934629	32941070	-	ENST00000418107.2@HLA-DMB	ENST00000418107.2	protein_coding	32940753,32938684,32937172,32935536,32935342,32934629	32941070,32938965,32937456,32935652,32935377,32934987	Gene ID= ENSG00000242574.8 TPM= 2.9 Transcript Type= protein_coding
chr6	32948613	32953122	32948613	32953122	-	ENST00000374843.8@HLA-DMA	ENST00000374843.8	protein_coding	32952949,32950519,32949611,32949271,32948613	32953122,32950803,32949889,32949399,32948868	Gene ID= ENSG00000204257.14 TPM= 5.79 Transcript Type= protein_coding
chr6	32970895	32978197	32970895	32978197	+	transcript1250.chr6.nic@BRD2	transcript1250.chr6.nic	protein_coding	32970895,32971595,32974462,32975021,32975384,32976031,32976250,32976562,32977442,32977757,32978126	32971197,32972927,32974765,32975112,32975521,32976169,32976464,32976936,32977570,32978005,32978197	Gene ID= ENSG00000204256.12 TPM= 14.03 Transcript Type= NA
chr6	32968585	32978197	32968585	32978197	+	transcript1251.chr6.nic@BRD2	transcript1251.chr6.nic	protein_coding	32968585,32971595,32974462,32975384,32976031,32976250,32976562,32977442,32977757,32978126	32969056,32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978197	Gene ID= ENSG00000204256.12 TPM= 5.98 Transcript Type= NA
chr6	32970888	32981505	32970888	32981505	+	ENST00000374831.8@BRD2	ENST00000374831.8	protein_coding	32970888,32971595,32974462,32975384,32976031,32976250,32976562,32977442,32977757,32978126,32979828,32980342,32980582	32971197,32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978388,32980132,32980464,32981505	Gene ID= ENSG00000204256.12 TPM= 16.92 Transcript Type= protein_coding
chr6	32970930	32978197	32970930	32978197	+	ENST00000495733.5@BRD2	ENST00000495733.5	protein_coding	32970930,32971595,32974462,32975384,32976031,32976250,32976562,32977260,32977757,32978126	32971197,32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978197	Gene ID= ENSG00000204256.12 TPM= 4.86 Transcript Type= nonsense_mediated_decay
chr6	32972217	32978203	32972217	32978203	+	ENST00000607833.5@BRD2	ENST00000607833.5	protein_coding	32972217,32974462,32975384,32976031,32976250,32976562,32977442,32977757,32978126	32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978203	Gene ID= ENSG00000204256.12 TPM= 20.95 Transcript Type= protein_coding
chr6	33075926	33087201	33075926	33087201	+	ENST00000418931.6@HLA-DPB1	ENST00000418931.6	protein_coding	33075926,33080672,33084950,33085779,33086219,33086539	33076141,33080935,33085231,33085889,33086242,33087201	Gene ID= ENSG00000223865.10 TPM= 12.55 Transcript Type= protein_coding
chr6	33197389	33198932	33197389	33198932	+	transcript1281.chr6.nnic@NA	transcript1281.chr6.nnic	NA	33197389	33198932	Gene ID= novel_gene_chr6_1282 TPM= 1.93 Transcript Type= NA
chr6	33200826	33204439	33200826	33204439	+	ENST00000374675.7@SLC39A7	ENST00000374675.7	protein_coding	33200826,33201242,33201745,33202072,33202263,33202560,33202910,33203541	33200938,33201656,33201913,33202125,33202427,33202700,33203106,33204439	Gene ID= ENSG00000112473.17 TPM= 2.9 Transcript Type= protein_coding
chr6	33200873	33204439	33200873	33204439	+	ENST00000374677.7@SLC39A7	ENST00000374677.7	protein_coding	33200873,33201745,33202072,33202263,33202560,33202910,33203541	33201656,33201913,33202125,33202427,33202700,33203106,33204439	Gene ID= ENSG00000112473.17 TPM= 4.83 Transcript Type= protein_coding
chr6	33204642	33206831	33204642	33206831	+	ENST00000374662.3@HSD17B8	ENST00000374662.3	protein_coding	33204642,33204902,33205221,33205447,33205640,33205828,33206134,33206375,33206638	33204720,33205119,33205337,33205539,33205725,33205912,33206176,33206449,33206831	Gene ID= ENSG00000204228.3 TPM= 3.86 Transcript Type= protein_coding
chr6	33204660	33206831	33204660	33206831	+	transcript1289.chr6.nic@HSD17B8	transcript1289.chr6.nic	protein_coding	33204660,33205221,33205447,33205640,33205828,33206134,33206375,33206638	33205119,33205337,33205539,33205725,33205912,33206176,33206449,33206831	Gene ID= ENSG00000204228.3 TPM= 2.9 Transcript Type= NA
chr6	33208495	33212722	33208495	33212722	+	ENST00000374656.4@RING1	ENST00000374656.4	protein_coding	33208495,33208765,33209626,33209915,33211158,33211729,33212298	33208644,33208900,33209786,33210130,33211547,33212002,33212722	Gene ID= ENSG00000204227.4 TPM= 10.62 Transcript Type= protein_coding
chr6	33208502	33211060	33208502	33211060	+	transcript1291.chr6.nic@RING1	transcript1291.chr6.nic	protein_coding	33208502,33208765,33209626,33209915	33208644,33208900,33209786,33211060	Gene ID= ENSG00000204227.4 TPM= 1.93 Transcript Type= NA
chr6	33250272	33271894	33250272	33271894	-	ENST00000445902.2@VPS52	ENST00000445902.2	protein_coding	33271586,33270199,33269999,33269744,33269490,33269014,33268499,33268108,33267865,33267682,33267188,33266557,33264782,33264374,33264008,33263772,33263484,33251860,33251518,33250272	33271894,33270283,33270051,33269819,33269557,33269189,33268649,33268208,33267997,33267739,33267321,33266712,33264900,33264497,33264103,33263879,33263549,33251971,33251636,33250987	Gene ID= ENSG00000223501.8 TPM= 31.37 Transcript Type= protein_coding
chr6	33250272	33270974	33250272	33270974	-	transcript1298.chr6.nic@VPS52	transcript1298.chr6.nic	protein_coding	33270199,33269999,33269744,33269490,33269014,33268499,33268108,33267865,33266557,33264782,33264374,33264008,33263772,33263484,33251860,33251518,33250272	33270974,33270051,33269819,33269557,33269189,33268649,33268208,33267997,33266712,33264900,33264497,33264103,33263879,33263549,33251971,33251636,33250987	Gene ID= ENSG00000223501.8 TPM= 5.31 Transcript Type= NA
chr6	33272010	33276510	33272010	33276510	+	ENST00000439602.6@RPS18	ENST00000439602.6	protein_coding	33272010,33272628,33275797,33275965,33276176,33276391	33272122,33272726,33275883,33276066,33276267,33276510	Gene ID= ENSG00000231500.6 TPM= 593.67 Transcript Type= protein_coding
chr6	33277132	33278825	33277132	33278825	+	ENST00000451237.2@B3GALT4	ENST00000451237.2	protein_coding	33277132	33278825	Gene ID= ENSG00000235863.3 TPM= 4.83 Transcript Type= protein_coding
chr6	33279108	33289527	33279108	33289527	-	ENST00000374617.8@WDR46	ENST00000374617.8	protein_coding	33289102,33288804,33288614,33288358,33288148,33287965,33287614,33287355,33287091,33286795,33280674,33280428,33279764,33279497,33279108	33289527,33289013,33288694,33288470,33288235,33288026,33287718,33287505,33287226,33286894,33280987,33280522,33279859,33279610,33279374	Gene ID= ENSG00000227057.9 TPM= 52.77 Transcript Type= protein_coding
chr6	33279108	33289256	33279108	33289256	-	transcript1305.chr6.nnic@WDR46	transcript1305.chr6.nnic	protein_coding	33289102,33288804,33288614,33288358,33288148,33287965,33287614,33287355,33287091,33286799,33284285,33280428,33279764,33279497,33279108	33289256,33289013,33288694,33288470,33288235,33288026,33287718,33287505,33287226,33286894,33284390,33280987,33279859,33279610,33279374	Gene ID= ENSG00000227057.9 TPM= 2.58 Transcript Type= NA
chr6	33279108	33289256	33279108	33289256	-	transcript1306.chr6.nnic@WDR46	transcript1306.chr6.nnic	protein_coding	33289102,33288804,33288614,33288358,33288148,33287965,33287614,33287355,33287091,33286799,33280428,33279764,33279497,33279108	33289256,33289013,33288694,33288470,33288235,33288026,33287718,33287505,33287226,33286894,33280522,33279859,33279610,33279374	Gene ID= ENSG00000227057.9 TPM= 2.58 Transcript Type= NA
chr6	33289597	33290934	33289597	33290934	+	ENST00000374607.5@PFDN6	ENST00000374607.5	protein_coding	33289597,33289770,33290174,33290326,33290716	33289628,33289920,33290244,33290450,33290934	Gene ID= ENSG00000204220.11 TPM= 1.93 Transcript Type= protein_coding
chr6	33291654	33299324	33291654	33299324	-	ENST00000497454.5@RGL2	ENST00000497454.5	protein_coding	33298870,33298455,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291654	33299324,33298651,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313	Gene ID= ENSG00000237441.9 TPM= 76.6 Transcript Type= protein_coding
chr6	33291654	33298930	33291654	33298930	-	ENST00000437840.6@RGL2	ENST00000437840.6	protein_coding	33298870,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291654	33298930,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313	Gene ID= ENSG00000237441.9 TPM= 14.82 Transcript Type= processed_transcript
chr6	33299694	33314387	33299694	33314387	-	ENST00000434618.6@TAPBP	ENST00000434618.6	protein_coding	33314005,33313694,33313217,33304989,33304297,33304128,33303955,33299694	33314387,33313864,33313477,33305387,33304638,33304217,33303989,33301771	Gene ID= ENSG00000231925.11 TPM= 85.91 Transcript Type= protein_coding
chr6	33314418	33317735	33314418	33317735	-	ENST00000431845.2@ZBTB22	ENST00000431845.2	protein_coding	33317653,33314418	33317735,33316985	Gene ID= ENSG00000236104.2 TPM= 23.17 Transcript Type= protein_coding
chr6	33318558	33323010	33318558	33323010	-	ENST00000266000.10@DAXX	ENST00000266000.10	protein_coding	33322862,33321719,33320736,33320380,33320011,33319380,33318997,33318558	33323010,33321974,33321567,33320591,33320224,33319854,33319219,33318802	Gene ID= ENSG00000204209.11 TPM= 24.21 Transcript Type= protein_coding
chr6	33318559	33323016	33318559	33323016	-	ENST00000414083.6@DAXX	ENST00000414083.6	protein_coding	33322862,33320736,33320380,33320011,33319380,33318997,33318559	33323016,33321567,33320591,33320224,33319854,33319219,33318802	Gene ID= ENSG00000204209.11 TPM= 2.82 Transcript Type= protein_coding
chr6	33318558	33323014	33318558	33323014	-	ENST00000374542.9@DAXX	ENST00000374542.9	protein_coding	33322862,33321719,33320736,33320380,33320011,33319380,33318997,33318558	33323014,33321977,33321567,33320591,33320224,33319854,33319219,33318802	Gene ID= ENSG00000204209.11 TPM= 53.17 Transcript Type= protein_coding
chr6	33410961	33416453	33410961	33416453	+	ENST00000374516.7@PHF1	ENST00000374516.7	protein_coding	33410961,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33414955,33415235,33415590,33415810	33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33414829,33415144,33415329,33415670,33416453	Gene ID= ENSG00000112511.17 TPM= 35.67 Transcript Type= protein_coding
chr6	33410961	33416453	33410961	33416453	+	ENST00000374512.7@PHF1	ENST00000374512.7	protein_coding	33410961,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33414966,33415590,33415810	33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33414829,33415144,33415670,33416453	Gene ID= ENSG00000112511.17 TPM= 4.05 Transcript Type= protein_coding
chr6	33410998	33416453	33410998	33416453	+	transcript1371.chr6.nnic@PHF1	transcript1371.chr6.nnic	protein_coding	33410998,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33415235,33415590,33415810	33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33414829,33415329,33415670,33416453	Gene ID= ENSG00000112511.17 TPM= 13.47 Transcript Type= NA
chr6	33410998	33416453	33410998	33416453	+	transcript1373.chr6.nnic@PHF1	transcript1373.chr6.nnic	protein_coding	33410998,33412248,33412508,33412698,33413196,33413409,33414041,33414243,33414477,33414725,33414955,33415235,33415590,33415810	33411215,33412422,33412589,33412793,33413296,33413557,33414109,33414366,33414544,33414829,33415144,33415329,33415670,33416453	Gene ID= ENSG00000112511.17 TPM= 22.15 Transcript Type= NA
chr6	33410998	33416453	33410998	33416453	+	transcript1374.chr6.nnic@PHF1	transcript1374.chr6.nnic	protein_coding	33410998,33412248,33412508,33412698,33413196,33413409,33414041,33414243,33414477,33414725,33415235,33415590,33415810	33411215,33412422,33412589,33412793,33413296,33413557,33414109,33414366,33414544,33414829,33415329,33415670,33416453	Gene ID= ENSG00000112511.17 TPM= 8.64 Transcript Type= NA
chr6	33416543	33418122	33416543	33418122	-	ENST00000488034.5@CUTA	ENST00000488034.5	protein_coding	33417959,33417481,33417251,33417097,33416920,33416543	33418122,33417695,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 38.61 Transcript Type= protein_coding
chr6	33416442	33418317	33416442	33418317	-	ENST00000374500.9@CUTA	ENST00000374500.9	protein_coding	33418087,33417481,33417251,33417097,33416920,33416442	33418317,33417695,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 15.44 Transcript Type= protein_coding
chr6	33416550	33418142	33416550	33418142	-	ENST00000374484.8@CUTA	ENST00000374484.8	protein_coding	33418087,33417481,33417247,33417097,33416920,33416550	33418142,33417695,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 9.65 Transcript Type= nonsense_mediated_decay
chr6	33454579	33457548	33454579	33457548	+	ENST00000395064.2@ZBTB9	ENST00000395064.2	protein_coding	33454579,33455030	33454775,33457548	Gene ID= ENSG00000213588.5 TPM= 8.69 Transcript Type= protein_coding
chr6	33572552	33580252	33572552	33580252	-	transcript1390.chr6.nnic@BAK1	transcript1390.chr6.nnic	protein_coding	33580025,33577535,33575793,33575298,33574034,33573827,33572552	33580252,33577635,33575928,33575441,33574214,33573907,33573719	Gene ID= ENSG00000030110.12 TPM= 3.38 Transcript Type= NA
chr6	33572552	33580242	33572552	33580242	-	ENST00000374467.3@BAK1	ENST00000374467.3	protein_coding	33580025,33577535,33575793,33575298,33574034,33572552	33580242,33577635,33575928,33575441,33574214,33573907	Gene ID= ENSG00000030110.12 TPM= 55.51 Transcript Type= protein_coding
chr6	33691891	33696569	33691891	33696569	+	transcript1399.chr6.nic@ITPR3	transcript1399.chr6.nic	protein_coding	33691891,33693545,33694924,33695712	33692893,33693705,33695085,33696569	Gene ID= ENSG00000096433.10 TPM= 2.9 Transcript Type= NA
chr6	33697568	33711743	33697568	33711743	-	transcript1403.chr6.nic@UQCC2	transcript1403.chr6.nic	protein_coding	33711549,33701346,33697568	33711743,33701420,33700513	Gene ID= ENSG00000137288.9 TPM= 2.9 Transcript Type= NA
chr6	33696761	33711727	33696761	33711727	-	ENST00000607484.5@UQCC2	ENST00000607484.5	protein_coding	33711549,33701346,33700444,33696761	33711727,33701420,33700513,33697750	Gene ID= ENSG00000137288.9 TPM= 15.44 Transcript Type= protein_coding
chr6	33721670	33748824	33721670	33748824	-	transcript1412.chr6.nnic@IP6K3	transcript1412.chr6.nnic	protein_coding	33748712,33746758,33746588,33739133,33735278,33728087,33726731,33725441,33721670	33748824,33746931,33746633,33739261,33735655,33728300,33726906,33725616,33723187	Gene ID= ENSG00000161896.11 TPM= 31.66 Transcript Type= NA
chr6	33721478	33748783	33721478	33748783	-	transcript1421.chr6.nnic@IP6K3	transcript1421.chr6.nnic	protein_coding	33748712,33739133,33735278,33728087,33726731,33725441,33721478	33748783,33739261,33735655,33728300,33726906,33725616,33723187	Gene ID= ENSG00000161896.11 TPM= 23.62 Transcript Type= NA
chr6	33721670	33748913	33721670	33748913	-	transcript1441.chr6.nnic@IP6K3	transcript1441.chr6.nnic	protein_coding	33748712,33735278,33728087,33726731,33725441,33721670	33748913,33735655,33728300,33726906,33725616,33723187	Gene ID= ENSG00000161896.11 TPM= 14.93 Transcript Type= NA
chr6	33745341	33748667	33745341	33748667	-	transcript1452.chr6.nic@IP6K3	transcript1452.chr6.nic	protein_coding	33746758,33745341	33748667,33746633	Gene ID= ENSG00000161896.11 TPM= 165.07 Transcript Type= NA
chr6	33721670	33746905	33721670	33746905	-	ENST00000293756.4@IP6K3	ENST00000293756.4	protein_coding	33746758,33735278,33728087,33726731,33725441,33721670	33746905,33735655,33728300,33726906,33725616,33723187	Gene ID= ENSG00000161896.11 TPM= 350.86 Transcript Type= protein_coding
chr6	33725831	33729784	33725831	33729784	+	transcript1457.chr6.nnic@NA	transcript1457.chr6.nnic	NA	33725831	33729784	Gene ID= novel_gene_chr6_1458 TPM= 4.83 Transcript Type= NA
chr6	33729722	33734148	33729722	33734148	-	transcript1459.chr6.nnic@NA	transcript1459.chr6.nnic	NA	33729722	33734148	Gene ID= novel_gene_chr6_1460 TPM= 10.62 Transcript Type= NA
chr6	33742884	33744039	33742884	33744039	+	transcript1455.chr6.nnic@NA	transcript1455.chr6.nnic	NA	33742884	33744039	Gene ID= novel_gene_chr6_1456 TPM= 3.86 Transcript Type= NA
chr6	33771202	33789136	33771202	33789136	-	ENST00000293760.9@LEMD2	ENST00000293760.9	protein_coding	33788381,33786734,33784352,33781077,33780100,33778242,33777138,33776954,33771202	33789136,33786774,33784427,33781153,33780179,33778387,33777239,33777056,33772778	Gene ID= ENSG00000161904.11 TPM= 153.8 Transcript Type= protein_coding
chr6	34236873	34246231	34236873	34246231	+	ENST00000401473.7@HMGA1	ENST00000401473.7	protein_coding	34236873,34237204,34240737,34242712,34243468,34244831	34236963,34237317,34240882,34242795,34243518,34246231	Gene ID= ENSG00000137309.19 TPM= 39 Transcript Type= protein_coding
chr6	34236873	34246231	34236873	34246231	+	ENST00000347617.10@HMGA1	ENST00000347617.10	protein_coding	34236873,34240737,34242712,34243468,34244831	34236963,34240882,34242795,34243518,34246231	Gene ID= ENSG00000137309.19 TPM= 16.8 Transcript Type= protein_coding
chr6	34236873	34246230	34236873	34246230	+	ENST00000447654.5@HMGA1	ENST00000447654.5	protein_coding	34236873,34240737,34242712,34243468,34244831	34237317,34240915,34242795,34243518,34246230	Gene ID= ENSG00000137309.19 TPM= 19.05 Transcript Type= protein_coding
chr6	34237625	34246231	34237625	34246231	+	transcript1488.chr6.nnic@HMGA1	transcript1488.chr6.nnic	protein_coding	34237625,34240737,34242712,34243468,34244831	34237714,34240915,34242795,34243518,34246231	Gene ID= ENSG00000137309.19 TPM= 18.08 Transcript Type= NA
chr6	34236873	34246231	34236873	34246231	+	ENST00000311487.9@HMGA1	ENST00000311487.9	protein_coding	34236873,34237204,34240737,34242712,34243468,34244831	34236963,34237317,34240915,34242795,34243518,34246231	Gene ID= ENSG00000137309.19 TPM= 70.21 Transcript Type= protein_coding
chr6	34246381	34249108	34246381	34249108	-	ENST00000636500.1@SMIM29	ENST00000636500.1	protein_coding	34248727,34247681,34247467,34247044,34246381	34249108,34247864,34247492,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 33.47 Transcript Type= protein_coding
chr6	34246380	34249470	34246380	34249470	-	ENST00000476320.5@SMIM29	ENST00000476320.5	protein_coding	34248979,34247681,34247467,34247044,34246380	34249470,34247864,34247492,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 113.91 Transcript Type= protein_coding
chr6	34246395	34249040	34246395	34249040	-	ENST00000394990.8@SMIM29	ENST00000394990.8	protein_coding	34248979,34247741,34247467,34247044,34246395	34249040,34247864,34247492,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 2.58 Transcript Type= protein_coding
chr6	34246395	34249020	34246395	34249020	-	ENST00000413013.6@SMIM29	ENST00000413013.6	protein_coding	34248979,34247681,34247044,34246395	34249020,34247864,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 4.51 Transcript Type= nonsense_mediated_decay
chr6	34341279	34392709	34341279	34392709	-	transcript1520.chr6.nic@NUDT3	transcript1520.chr6.nic	protein_coding	34392264,34341279	34392709,34341972	Gene ID= ENSG00000272325.1 TPM= 3.86 Transcript Type= NA
chr6	34391852	34393385	34391852	34393385	+	transcript1522.chr6.nnic@NA	transcript1522.chr6.nnic	NA	34391852	34393385	Gene ID= novel_gene_chr6_1523 TPM= 3.86 Transcript Type= NA
chr6	34417454	34426125	34417454	34426125	-	ENST00000326199.12@RPS10	ENST00000326199.12	protein_coding	34426032,34425072,34424669,34421730,34418369,34417454	34426125,34425221,34424840,34421807,34418424,34417547	Gene ID= ENSG00000124614.13 TPM= 294.9 Transcript Type= protein_coding
chr6	34417466	34426041	34417466	34426041	-	ENST00000621356.2@RPS10	ENST00000621356.2	protein_coding	34425796,34425072,34424669,34421730,34418369,34417466	34426041,34425221,34424840,34421807,34418424,34417547	Gene ID= ENSG00000124614.13 TPM= 4.34 Transcript Type= protein_coding
chr6	34587288	34696847	34587288	34696847	-	ENST00000374023.7@C6orf106	ENST00000374023.7	protein_coding	34696446,34654625,34646601,34606555,34587288	34696847,34654779,34646798,34606904,34590600	Gene ID= ENSG00000196821.9 TPM= 90.74 Transcript Type= protein_coding
chr6	34587288	34696859	34587288	34696859	-	ENST00000374026.7@C6orf106	ENST00000374026.7	protein_coding	34696446,34654625,34606555,34587288	34696859,34654779,34606904,34590600	Gene ID= ENSG00000196821.9 TPM= 58.88 Transcript Type= protein_coding
chr6	34696317	34697470	34696317	34697470	+	ENST00000606971.5@AL451165.2	ENST00000606971.5	antisense_RNA	34696317,34697159	34696722,34697470	Gene ID= ENSG00000272288.5 TPM= 1.93 Transcript Type= antisense_RNA
chr6	34696945	34697470	34696945	34697470	+	ENST00000606496.1@AL451165.2	ENST00000606496.1	antisense_RNA	34696945,34697159	34696997,34697470	Gene ID= ENSG00000272288.5 TPM= 1.93 Transcript Type= antisense_RNA
chr6	34757406	34773794	34757406	34773794	+	ENST00000244520.9@SNRPC	ENST00000244520.9	protein_coding	34757406,34757912,34762595,34767908,34770291,34773446	34757551,34757954,34762703,34767997,34770395,34773794	Gene ID= ENSG00000124562.9 TPM= 81.09 Transcript Type= protein_coding
chr6	34877778	34888071	34877778	34888071	-	transcript1546.chr6.nnic@TAF11	transcript1546.chr6.nnic	protein_coding	34887787,34882932,34880289,34879967,34877778	34888071,34883080,34880345,34880063,34878720	Gene ID= ENSG00000064995.16 TPM= 1.93 Transcript Type= NA
chr6	34877778	34888089	34877778	34888089	-	ENST00000361288.8@TAF11	ENST00000361288.8	protein_coding	34887787,34882932,34880289,34879967,34877778	34888089,34883080,34880376,34880063,34878720	Gene ID= ENSG00000064995.16 TPM= 48.27 Transcript Type= protein_coding
chr6	35259512	35295983	35259512	35295983	+	transcript1560.chr6.nic@ZNF76	transcript1560.chr6.nic	protein_coding	35259512,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35293751,35294456,35295144	35259727,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35293915,35294569,35295983	Gene ID= ENSG00000065029.14 TPM= 28.96 Transcript Type= NA
chr6	35259774	35295983	35259774	35295983	+	ENST00000339411.5@ZNF76	ENST00000339411.5	protein_coding	35259774,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35294456,35295144	35259841,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35294569,35295983	Gene ID= ENSG00000065029.14 TPM= 13.51 Transcript Type= protein_coding
chr6	35297852	35321771	35297852	35321771	+	ENST00000316637.6@DEF6	ENST00000316637.6	protein_coding	35297852,35309670,35310459,35312302,35312626,35317891,35318173,35319524,35319819,35320884,35321187	35297952,35309810,35310644,35312538,35312772,35317999,35318471,35319690,35320017,35320974,35321771	Gene ID= ENSG00000023892.10 TPM= 1.93 Transcript Type= protein_coding
chr6	35342558	35428191	35342558	35428191	+	ENST00000360694.7@PPARD	ENST00000360694.7	protein_coding	35342558,35347067,35410987,35420127,35421820,35423946,35424329,35425832	35342681,35347150,35411217,35420281,35421958,35424148,35424779,35428191	Gene ID= ENSG00000112033.13 TPM= 32.82 Transcript Type= protein_coding
chr6	35347910	35351110	35347910	35351110	-	transcript1579.chr6.nnic@NA	transcript1579.chr6.nnic	NA	35347910	35351110	Gene ID= novel_gene_chr6_1580 TPM= 8.69 Transcript Type= NA
chr6	35377873	35383800	35377873	35383800	-	transcript1581.chr6.nnic@NA	transcript1581.chr6.nnic	NA	35377873	35383800	Gene ID= novel_gene_chr6_1582 TPM= 1.93 Transcript Type= NA
chr6	35452318	35467103	35452318	35467103	+	transcript1584.chr6.nnic@FANCE	transcript1584.chr6.nnic	protein_coding	35452318,35455747,35457556,35457916,35458318,35459331,35459682,35460552,35462789,35466244	35452793,35456353,35457600,35457984,35458440,35459454,35459760,35460618,35462914,35467103	Gene ID= ENSG00000112039.3 TPM= 2.9 Transcript Type= NA
chr6	35452318	35467103	35452318	35467103	+	transcript1585.chr6.nnic@FANCE	transcript1585.chr6.nnic	protein_coding	35452318,35455747,35457556,35458297,35459331,35459682,35460552,35462789,35466244	35452793,35456353,35457600,35458440,35459454,35459760,35460618,35462914,35467103	Gene ID= ENSG00000112039.3 TPM= 6.76 Transcript Type= NA
chr6	35452361	35467103	35452361	35467103	+	ENST00000229769.2@FANCE	ENST00000229769.2	protein_coding	35452361,35455747,35457556,35457916,35458297,35459331,35459682,35460552,35462789,35466244	35452793,35456353,35457600,35457984,35458440,35459454,35459760,35460618,35462914,35467103	Gene ID= ENSG00000112039.3 TPM= 22.2 Transcript Type= protein_coding
chr6	35468408	35470785	35468408	35470785	+	ENST00000322203.6@RPL10A	ENST00000322203.6	protein_coding	35468408,35468799,35468947,35469381,35470179,35470580	35468439,35468873,35469027,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 662.3 Transcript Type= protein_coding
chr6	35468408	35470785	35468408	35470785	+	ENST00000467020.5@RPL10A	ENST00000467020.5	protein_coding	35468408,35468799,35468947,35470179,35470580	35468439,35468873,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 10.71 Transcript Type= processed_transcript
chr6	35468420	35470785	35468420	35470785	+	ENST00000464112.5@RPL10A	ENST00000464112.5	protein_coding	35468420,35468947,35469381,35470179,35470580	35468873,35469027,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 16.51 Transcript Type= processed_transcript
chr6	35468420	35470785	35468420	35470785	+	ENST00000478340.2@RPL10A	ENST00000478340.2	protein_coding	35468420,35468799,35468947,35469381,35470179,35470580	35468439,35468873,35469285,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 5.89 Transcript Type= processed_transcript
chr6	35473597	35497079	35473597	35497079	-	transcript1587.chr6.nnic@TEAD3	transcript1587.chr6.nnic	protein_coding	35496898,35486461,35484560,35480312,35480060,35479305,35478434,35478275,35477311,35476302,35475919,35475566,35475336,35473597	35497079,35486711,35484624,35480374,35480122,35479316,35478571,35478324,35477372,35476435,35476092,35475706,35475488,35475157	Gene ID= ENSG00000007866.19 TPM= 15.44 Transcript Type= NA
chr6	35473597	35497079	35473597	35497079	-	transcript1588.chr6.nnic@TEAD3	transcript1588.chr6.nnic	protein_coding	35496898,35486461,35484560,35480060,35479305,35478434,35478275,35477311,35476302,35475919,35475566,35475336,35473597	35497079,35486711,35484624,35480122,35479316,35478571,35478324,35477372,35476435,35476092,35475706,35475488,35475157	Gene ID= ENSG00000007866.19 TPM= 17.38 Transcript Type= NA
chr6	35573590	35688937	35573590	35688937	-	ENST00000357266.8@FKBP5	ENST00000357266.8	protein_coding	35688804,35642720,35637014,35620132,35619096,35597248,35591130,35587034,35580036,35576994,35573590	35688937,35642843,35637158,35620274,35619210,35597404,35591220,35587117,35580221,35577233,35575942	Gene ID= ENSG00000096060.14 TPM= 1401.82 Transcript Type= protein_coding
chr6	35573585	35688915	35573585	35688915	-	ENST00000539068.5@FKBP5	ENST00000539068.5	protein_coding	35688732,35642720,35637014,35620132,35619096,35597248,35591130,35587034,35580036,35576994,35573585	35688915,35642843,35637158,35620274,35619210,35597404,35591220,35587117,35580221,35577233,35575942	Gene ID= ENSG00000096060.14 TPM= 24.94 Transcript Type= protein_coding
chr6	35687857	35690527	35687857	35690527	+	transcript1837.chr6.nnic@NA	transcript1837.chr6.nnic	NA	35687857	35690527	Gene ID= novel_gene_chr6_1838 TPM= 17.38 Transcript Type= NA
chr6	35832966	35921342	35832966	35921342	-	ENST00000373825.6@SRPK1	ENST00000373825.6	protein_coding	35921044,35920468,35890895,35888815,35888024,35886724,35874233,35872563,35870934,35870281,35869482,35869010,35857261,35842535,35838337,35832966	35921342,35920528,35891013,35888923,35888111,35886811,35874339,35872728,35870959,35870494,35869901,35869110,35857368,35842604,35838429,35835488	Gene ID= ENSG00000096063.15 TPM= 33.79 Transcript Type= protein_coding
chr6	35886586	35921098	35886586	35921098	-	transcript1858.chr6.nic@SRPK1	transcript1858.chr6.nic	protein_coding	35921044,35920468,35890895,35888815,35888024,35886586	35921098,35920528,35891013,35888923,35888111,35886811	Gene ID= ENSG00000096063.15 TPM= 1.93 Transcript Type= NA
chr6	35833034	35921147	35833034	35921147	-	ENST00000423325.6@SRPK1	ENST00000423325.6	protein_coding	35921044,35920468,35890895,35888815,35888024,35886724,35874233,35872563,35870934,35870281,35869482,35869010,35857261,35842535,35838337,35833034	35921147,35920528,35891041,35888923,35888111,35886811,35874339,35872728,35870959,35870494,35869901,35869110,35857368,35842604,35838429,35835488	Gene ID= ENSG00000096063.15 TPM= 31.86 Transcript Type= protein_coding
chr6	36027770	36110755	36027770	36110755	+	ENST00000229794.8@MAPK14	ENST00000229794.8	protein_coding	36027770,36052699,36059289,36072873,36073691,36074049,36075848,36076537,36095987,36102571,36107455,36108380	36028273,36052828,36059347,36072984,36073720,36074096,36075962,36076608,36096066,36102649,36107628,36110755	Gene ID= ENSG00000112062.10 TPM= 21.24 Transcript Type= protein_coding
chr6	36130321	36140065	36130321	36140065	+	ENST00000211287.8@MAPK13	ENST00000211287.8	protein_coding	36130321,36131271,36132621,36135753,36136019,36136484,36136656,36136879,36138365,36138702,36138879,36139294	36130701,36131400,36132679,36135861,36136048,36136531,36136770,36136950,36138444,36138780,36139055,36140065	Gene ID= ENSG00000156711.16 TPM= 2.9 Transcript Type= protein_coding
chr6	36443038	36490554	36443038	36490554	+	transcript1878.chr6.nic@KCTD20	transcript1878.chr6.nic	protein_coding	36443038,36465601,36470052,36474789,36479121,36479591,36481562,36484714,36486883	36443111,36465698,36470257,36475062,36479223,36479711,36481759,36484824,36490554	Gene ID= ENSG00000112078.13 TPM= 1.93 Transcript Type= NA
chr6	36442767	36491143	36442767	36491143	+	ENST00000373731.6@KCTD20	ENST00000373731.6	protein_coding	36442767,36470052,36474789,36479121,36479591,36481562,36484714,36486883	36443111,36470257,36475062,36479223,36479711,36481759,36484824,36491143	Gene ID= ENSG00000112078.13 TPM= 5.79 Transcript Type= protein_coding
chr6	36443007	36490554	36443007	36490554	+	transcript1883.chr6.nnic@KCTD20	transcript1883.chr6.nnic	protein_coding	36443007,36479121,36479591,36481562,36484714,36486883	36443111,36479223,36479711,36481759,36484824,36490554	Gene ID= ENSG00000112078.13 TPM= 1.93 Transcript Type= NA
chr6	36493892	36547470	36493892	36547470	-	ENST00000229812.7@STK38	ENST00000229812.7	protein_coding	36547190,36540072,36525591,36524341,36521734,36517717,36515338,36507500,36506583,36499873,36498363,36497780,36496711,36493892	36547470,36540207,36525642,36524463,36521817,36517840,36515492,36507602,36506644,36499990,36498486,36497875,36496805,36495914	Gene ID= ENSG00000112079.8 TPM= 12.55 Transcript Type= protein_coding
chr6	36601942	36606281	36601942	36606281	-	transcript1901.chr6.nnic@NA	transcript1901.chr6.nnic	NA	36601942	36606281	Gene ID= novel_gene_chr6_1902 TPM= 6.76 Transcript Type= NA
chr6	36676490	36687337	36676490	36687337	+	ENST00000448526.6@CDKN1A	ENST00000448526.6	protein_coding	36676490,36677902,36684097,36685751	36676524,36677933,36684546,36687337	Gene ID= ENSG00000124762.13 TPM= 18.05 Transcript Type= protein_coding
chr6	36678658	36687339	36678658	36687339	+	ENST00000244741.9@CDKN1A	ENST00000244741.9	protein_coding	36678658,36684097,36685751	36678798,36684546,36687339	Gene ID= ENSG00000124762.13 TPM= 313.24 Transcript Type= protein_coding
chr6	36678710	36687337	36678710	36687337	+	ENST00000405375.5@CDKN1A	ENST00000405375.5	protein_coding	36678710,36684097,36685751	36678939,36684546,36687337	Gene ID= ENSG00000124762.13 TPM= 35.43 Transcript Type= protein_coding
chr6	36854827	36875024	36854827	36875024	-	ENST00000373699.5@PPIL1	ENST00000373699.5	protein_coding	36874717,36871718,36856586,36854827	36875024,36871872,36856654,36856033	Gene ID= ENSG00000137168.7 TPM= 19.31 Transcript Type= protein_coding
chr6	36885973	36924556	36885973	36924556	+	transcript1925.chr6.nnic@C6orf89	transcript1925.chr6.nnic	protein_coding	36885973,36899426,36902221,36914284,36914554,36916445,36919578,36923347,36924330	36886028,36899633,36902434,36914435,36914693,36916574,36919701,36924167,36924556	Gene ID= ENSG00000198663.16 TPM= 3.86 Transcript Type= NA
chr6	36885864	36923522	36885864	36923522	+	ENST00000355190.7@C6orf89	ENST00000355190.7	protein_coding	36885864,36899426,36902221,36914284,36914554,36916445,36919578,36923347	36886028,36899633,36902434,36914435,36914693,36916574,36919701,36923522	Gene ID= ENSG00000198663.16 TPM= 8.69 Transcript Type= protein_coding
chr6	36954433	36964837	36954433	36964837	+	ENST00000373674.3@PI16	ENST00000373674.3	protein_coding	36954433,36959145,36961451,36961886,36962935,36963823,36964386	36954931,36959366,36961560,36961974,36963612,36963962,36964837	Gene ID= ENSG00000164530.13 TPM= 5.79 Transcript Type= protein_coding
chr6	36968141	36986169	36968141	36986169	-	transcript1964.chr6.nic@MTCH1	transcript1964.chr6.nic	protein_coding	36985853,36981588,36978505,36978078,36977634,36977199,36975658,36972652,36970647,36970406,36968141	36986169,36981672,36978611,36978155,36977691,36977250,36975717,36972796,36970694,36970473,36970114	Gene ID= ENSG00000137409.19 TPM= 19.95 Transcript Type= NA
chr6	37170203	37175426	37170203	37175426	+	ENST00000373509.5@PIM1	ENST00000373509.5	protein_coding	37170203,37170773,37170981,37171125,37172996,37173934	37170657,37170879,37171031,37171491,37173172,37175426	Gene ID= ENSG00000137193.13 TPM= 55.02 Transcript Type= protein_coding
chr6	37257772	37332970	37257772	37332970	+	ENST00000373491.3@TBC1D22B	ENST00000373491.3	protein_coding	37257772,37269594,37279304,37282185,37282882,37284336,37287007,37291243,37312918,37313816,37316703,37317111,37331044	37257973,37269650,37279611,37282364,37282952,37284464,37287072,37291357,37313024,37313891,37316830,37317206,37332970	Gene ID= ENSG00000065491.8 TPM= 12.07 Transcript Type= protein_coding
chr6	37257771	37332970	37257771	37332970	+	transcript1988.chr6.nnic@TBC1D22B	transcript1988.chr6.nnic	protein_coding	37257771,37269594,37279304,37282882,37284336,37287007,37291243,37312918,37313816,37316703,37317111,37331044	37257973,37269650,37279611,37282952,37284464,37287072,37291357,37313024,37313891,37316830,37317206,37332970	Gene ID= ENSG00000065491.8 TPM= 4.34 Transcript Type= NA
chr6	37353975	37391231	37353975	37391231	+	transcript1995.chr6.nic@RNF8	transcript1995.chr6.nic	protein_coding	37353975,37360446,37368484,37371512,37376926,37381150,37390742	37354275,37360574,37369218,37371574,37377033,37381354,37391231	Gene ID= ENSG00000112130.16 TPM= 1.93 Transcript Type= NA
chr6	37433207	37482827	37433207	37482827	+	transcript2000.chr6.nic@CMTR1	transcript2000.chr6.nic	protein_coding	37433207,37435624,37443999,37446291,37450251,37451806,37453047,37453240,37458612,37459566,37461549,37461970,37462829,37471021,37471847,37472419,37473470,37474524,37475321,37476126,37477592,37478409,37479147,37482492	37433377,37435762,37444150,37446449,37450343,37451877,37453141,37453312,37458810,37459684,37461645,37462102,37463008,37471077,37471904,37472487,37473601,37474646,37475412,37476194,37477639,37478521,37479255,37482827	Gene ID= ENSG00000137200.12 TPM= 5.31 Transcript Type= NA
chr6	37433207	37464481	37433207	37464481	+	transcript2004.chr6.nic@CMTR1	transcript2004.chr6.nic	protein_coding	37433207,37435624,37443999,37446291,37450251,37451806,37453047,37453240,37458612,37459566,37461549	37433377,37435762,37444150,37446449,37450343,37451877,37453141,37453312,37458810,37459684,37464481	Gene ID= ENSG00000137200.12 TPM= 1.93 Transcript Type= NA
chr6	37433220	37481506	37433220	37481506	+	ENST00000373451.8@CMTR1	ENST00000373451.8	protein_coding	37433220,37435624,37443999,37446291,37450251,37451806,37453047,37453240,37458612,37459566,37461549,37461970,37462829,37471021,37471847,37472419,37473470,37474524,37475321,37476126,37477592,37478409,37479147,37480013	37433377,37435762,37444150,37446449,37450343,37451877,37453141,37453312,37458810,37459684,37461645,37462102,37463008,37471077,37471904,37472487,37473601,37474646,37475412,37476194,37477639,37478521,37479255,37481506	Gene ID= ENSG00000137200.12 TPM= 25.58 Transcript Type= protein_coding
chr6	37482920	37499922	37482920	37499922	-	ENST00000373408.3@CCDC167	ENST00000373408.3	protein_coding	37499822,37485100,37484810,37482920	37499922,37485194,37484862,37483289	Gene ID= ENSG00000198937.8 TPM= 14.48 Transcript Type= protein_coding
chr6	37819774	38154624	37819774	38154624	+	transcript2006.chr6.nic@ZFAND3	transcript2006.chr6.nic	protein_coding	37819774,37929959,38003691,38061593,38082392,38116572,38152235	37820016,37929999,38003783,38061775,38082457,38116739,38154624	Gene ID= ENSG00000156639.11 TPM= 14.8 Transcript Type= NA
chr6	37819499	38154624	37819499	38154624	+	ENST00000287218.8@ZFAND3	ENST00000287218.8	protein_coding	37819499,37929959,38061593,38082392,38116572,38152235	37820016,37929999,38061775,38082457,38116739,38154624	Gene ID= ENSG00000156639.11 TPM= 77.54 Transcript Type= protein_coding
chr6	37819795	38118777	37819795	38118777	+	transcript2014.chr6.nic@ZFAND3	transcript2014.chr6.nic	protein_coding	37819795,37929959,38061593,38082392,38116572	37820016,37929999,38061775,38082457,38118777	Gene ID= ENSG00000156639.11 TPM= 1.93 Transcript Type= NA
chr6	37819798	38154624	37819798	38154624	+	ENST00000373391.6@ZFAND3	ENST00000373391.6	protein_coding	37819798,37929959,38061593,38116572,38152235	37820016,37929999,38061775,38116739,38154624	Gene ID= ENSG00000156639.11 TPM= 12.87 Transcript Type= protein_coding
chr6	38170963	38174359	38170963	38174359	-	transcript2019.chr6.nnic@NA	transcript2019.chr6.nnic	NA	38170963	38174359	Gene ID= novel_gene_chr6_2020 TPM= 3.86 Transcript Type= NA
chr6	38675925	38703141	38675925	38703141	-	ENST00000373365.4@GLO1	ENST00000373365.4	protein_coding	38702971,38686892,38684374,38682808,38682012,38675925	38703141,38686974,38684514,38682875,38682101,38677383	Gene ID= ENSG00000124767.6 TPM= 140.45 Transcript Type= protein_coding
chr6	39792318	39876346	39792318	39876346	+	transcript2037.chr6.nic@DAAM2	transcript2037.chr6.nic	protein_coding	39792318,39856247,39860928,39864433,39864980,39867510,39868823,39870340,39871506,39873238,39875330	39792465,39856470,39861017,39864507,39865074,39867843,39868933,39870443,39871572,39873355,39876346	Gene ID= ENSG00000146122.16 TPM= 2.9 Transcript Type= NA
chr6	39792366	39904868	39792366	39904868	+	ENST00000274867.8@DAAM2	ENST00000274867.8	protein_coding	39792366,39856247,39860928,39864433,39864980,39867510,39868823,39870340,39871506,39873238,39875330,39878203,39878404,39879178,39883962,39887486,39888679,39891341,39891634,39896812,39897175,39898877,39900077,39901302,39901813	39792465,39856470,39861017,39864507,39865074,39867843,39868933,39870443,39871572,39873355,39875468,39878261,39878588,39879477,39884069,39887592,39888763,39891447,39891722,39896980,39897282,39898937,39900208,39901472,39904868	Gene ID= ENSG00000146122.16 TPM= 50.2 Transcript Type= protein_coding
chr6	39885198	39887958	39885198	39887958	-	transcript2057.chr6.nnic@NA	transcript2057.chr6.nnic	NA	39885198	39887958	Gene ID= novel_gene_chr6_2058 TPM= 1.93 Transcript Type= NA
chr6	39905059	39934551	39905059	39934551	-	ENST00000373188.6@MOCS1	ENST00000373188.6	protein_coding	39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39909040,39905059	39934551,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39909102,39907117	Gene ID= ENSG00000124615.17 TPM= 8.37 Transcript Type= protein_coding
chr6	39905321	39934510	39905321	39934510	-	transcript2045.chr6.nic@MOCS1	transcript2045.chr6.nic	protein_coding	39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39905321	39934510,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39907117	Gene ID= ENSG00000124615.17 TPM= 5.47 Transcript Type= NA
chr6	39905525	39934421	39905525	39934421	-	ENST00000340692.9@MOCS1	ENST00000340692.9	protein_coding	39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39909055,39905525	39934421,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39909102,39907117	Gene ID= ENSG00000124615.17 TPM= 39.58 Transcript Type= protein_coding
chr6	41053304	41064511	41053304	41064511	+	ENST00000244669.2@APOBEC2	ENST00000244669.2	protein_coding	41053304,41061328,41064101	41053478,41061892,41064511	Gene ID= ENSG00000124701.5 TPM= 111.98 Transcript Type= protein_coding
chr6	41072945	41099976	41072945	41099976	+	ENST00000341376.10@NFYA	ENST00000341376.10	protein_coding	41072945,41079029,41080811,41084046,41089579,41090204,41091528,41092912,41094396,41097357	41073084,41079164,41080897,41084192,41089710,41090309,41091694,41093085,41094497,41099976	Gene ID= ENSG00000001167.14 TPM= 13.51 Transcript Type= protein_coding
chr6	41683980	41735608	41683980	41735608	-	ENST00000373033.5@TFEB	ENST00000373033.5	protein_coding	41735350,41691001,41690663,41689731,41687908,41687753,41687094,41686090,41683980	41735608,41691235,41690917,41689811,41688028,41687809,41687169,41686237,41685078	Gene ID= ENSG00000112561.17 TPM= 127.34 Transcript Type= protein_coding
chr6	41683979	41735527	41683979	41735527	-	ENST00000420312.5@TFEB	ENST00000420312.5	protein_coding	41735350,41691001,41689731,41687908,41687753,41687094,41686090,41683979	41735527,41691235,41689811,41688028,41687809,41687169,41686237,41685078	Gene ID= ENSG00000112561.17 TPM= 14.07 Transcript Type= protein_coding
chr6	41770176	41779900	41770176	41779900	-	ENST00000373018.7@FRS3	ENST00000373018.7	protein_coding	41779816,41778033,41776922,41775419,41772798,41771816,41770176	41779900,41778176,41777010,41775605,41772959,41771964,41771533	Gene ID= ENSG00000137218.10 TPM= 8.69 Transcript Type= protein_coding
chr6	41787662	41789898	41787662	41789898	+	ENST00000398884.7@TOMM6	ENST00000398884.7	protein_coding	41787662,41789232,41789531	41787825,41789336,41789898	Gene ID= ENSG00000214736.7 TPM= 18.34 Transcript Type= protein_coding
chr6	41787665	41789896	41787665	41789896	+	ENST00000398881.3@TOMM6	ENST00000398881.3	protein_coding	41787665,41789232,41789568	41787825,41789336,41789896	Gene ID= ENSG00000214736.7 TPM= 33.79 Transcript Type= protein_coding
chr6	41905354	41921099	41905354	41921099	-	ENST00000265350.8@MED20	ENST00000265350.8	protein_coding	41921005,41916785,41909269,41905354	41921099,41916939,41909522,41907287	Gene ID= ENSG00000124641.15 TPM= 14.48 Transcript Type= protein_coding
chr6	41921472	41934375	41921472	41934375	+	transcript2101.chr6.nnic@BYSL	transcript2101.chr6.nnic	protein_coding	41921472,41927374,41930132,41930635,41931396,41931728,41932361,41934047	41921830,41927536,41930270,41930768,41931556,41931830,41933345,41934375	Gene ID= ENSG00000112578.9 TPM= 4.83 Transcript Type= NA
chr6	41921188	41933046	41921188	41933046	+	ENST00000230340.8@BYSL	ENST00000230340.8	protein_coding	41921188,41927374,41930132,41930635,41931396,41931728,41932361	41921830,41927536,41930270,41930768,41931556,41931830,41933046	Gene ID= ENSG00000112578.9 TPM= 28.96 Transcript Type= protein_coding
chr6	41934933	41941848	41934933	41941848	-	ENST00000372991.8@CCND3	ENST00000372991.8	protein_coding	41941452,41940370,41937235,41936559,41934933	41941848,41940585,41937394,41936695,41936107	Gene ID= ENSG00000112576.12 TPM= 21.72 Transcript Type= protein_coding
chr6	41934956	42048968	41934956	42048968	-	ENST00000372988.8@CCND3	ENST00000372988.8	protein_coding	42048501,41940370,41937235,41936559,41934956	42048968,41940585,41937394,41936695,41936107	Gene ID= ENSG00000112576.12 TPM= 6.27 Transcript Type= protein_coding
chr6	41934956	42048894	41934956	42048894	-	ENST00000415497.6@CCND3	ENST00000415497.6	protein_coding	42048501,41937235,41936559,41934956	42048894,41937394,41936695,41936107	Gene ID= ENSG00000112576.12 TPM= 1.93 Transcript Type= protein_coding
chr6	42050513	42057789	42050513	42057789	+	ENST00000372978.7@TAF8	ENST00000372978.7	protein_coding	42050513,42051357,42055531,42055952,42057389	42050586,42051513,42055629,42056014,42057789	Gene ID= ENSG00000137413.15 TPM= 3.86 Transcript Type= protein_coding
chr6	42206801	42217861	42206801	42217861	-	transcript2122.chr6.nnic@MRPS10	transcript2122.chr6.nnic	protein_coding	42217802,42216960,42214280,42214120,42211781,42210488,42208858,42206801	42217861,42216989,42214344,42214192,42211917,42210596,42208947,42208372	Gene ID= ENSG00000048544.5 TPM= 5.79 Transcript Type= NA
chr6	42206801	42217865	42206801	42217865	-	ENST00000053468.3@MRPS10	ENST00000053468.3	protein_coding	42217802,42214280,42214120,42211781,42210488,42208858,42206801	42217865,42214344,42214192,42211917,42210596,42208947,42208372	Gene ID= ENSG00000048544.5 TPM= 83.02 Transcript Type= protein_coding
chr6	42564062	42693504	42564062	42693504	+	ENST00000372901.1@UBR2	ENST00000372901.1	protein_coding	42564062,42573734,42592151,42594191,42603588,42605721,42606589,42612171,42615071,42616002,42617409,42632552,42632805,42635418,42637011,42640209,42641582,42642416,42644214,42644473,42645466,42648118,42650284,42652023,42652491,42655621,42658024,42658240,42658646,42659656,42662184,42663258,42665409,42666167,42670092,42670660,42673791,42674126,42676056,42676783,42678539,42679724,42683055,42684794,42688216,42689569,42691032	42564397,42573993,42592229,42594304,42603718,42605859,42606651,42612291,42615178,42616090,42617507,42632715,42632904,42635546,42637194,42640270,42641692,42642481,42644336,42644536,42645590,42648170,42650386,42652071,42652645,42655723,42658133,42658320,42658824,42659855,42662277,42663419,42665512,42666245,42670240,42670715,42673887,42674193,42676191,42676873,42678669,42679832,42683111,42684871,42688386,42689670,42693504	Gene ID= ENSG00000024048.10 TPM= 16.41 Transcript Type= protein_coding
chr6	42696547	42723090	42696547	42723090	-	transcript2142.chr6.nnic@PRPH2	transcript2142.chr6.nnic	protein_coding	42721754,42704365,42696547	42723090,42704611,42698510	Gene ID= ENSG00000112619.7 TPM= 3.86 Transcript Type= NA
chr6	42696600	42722574	42696600	42722574	-	ENST00000230381.6@PRPH2	ENST00000230381.6	protein_coding	42721754,42704365,42696600	42722574,42704611,42698507	Gene ID= ENSG00000112619.7 TPM= 3.86 Transcript Type= protein_coding
chr6	42744481	42746096	42744481	42746096	-	ENST00000372876.1@TBCC	ENST00000372876.1	protein_coding	42744481	42746096	Gene ID= ENSG00000124659.6 TPM= 43.44 Transcript Type= protein_coding
chr6	42782745	42785574	42782745	42785574	+	transcript2147.chr6.nnic@NA	transcript2147.chr6.nnic	NA	42782745	42785574	Gene ID= novel_gene_chr6_2148 TPM= 4.83 Transcript Type= NA
chr6	42879627	42887010	42879627	42887010	+	transcript2161.chr6.nic@RPL7L1	transcript2161.chr6.nic	protein_coding	42879627,42883451,42884613,42885974,42886256	42879951,42883614,42884750,42886083,42887010	Gene ID= ENSG00000146223.14 TPM= 5.79 Transcript Type= NA
chr6	42879933	42886249	42879933	42886249	+	ENST00000602561.1@RPL7L1	ENST00000602561.1	protein_coding	42879933,42880861,42883451,42884613,42885974	42879951,42880966,42883614,42884750,42886249	Gene ID= ENSG00000146223.14 TPM= 1.93 Transcript Type= protein_coding
chr6	42890265	42890816	42890265	42890816	-	ENST00000408925.3@C6orf226	ENST00000408925.3	protein_coding	42890265	42890816	Gene ID= ENSG00000221821.3 TPM= 13.51 Transcript Type= protein_coding
chr6	42929498	42939287	42929498	42939287	+	transcript2167.chr6.nnic@CNPY3	transcript2167.chr6.nnic	protein_coding	42929498,42934475,42935412,42935574,42937717,42938090,42938568	42929721,42934598,42935473,42935670,42937839,42938207,42939287	Gene ID= ENSG00000137161.16 TPM= 2.41 Transcript Type= NA
chr6	42929200	42939287	42929200	42939287	+	ENST00000372836.4@CNPY3	ENST00000372836.4	protein_coding	42929200,42934475,42935574,42937717,42938090,42938568	42929721,42934598,42935670,42937839,42938207,42939287	Gene ID= ENSG00000137161.16 TPM= 7.24 Transcript Type= protein_coding
chr6	42964008	42979204	42964008	42979204	-	transcript2175.chr6.nnic@PEX6	transcript2175.chr6.nnic	protein_coding	42978533,42974875,42974003,42969885,42969668,42968874,42968290,42967368,42966782,42966525,42966242,42966044,42965681,42965252,42965075,42964790,42964008	42979204,42975038,42974086,42969987,42969801,42968985,42968498,42967563,42966858,42966657,42966447,42966105,42965789,42965368,42965152,42964929,42964471	Gene ID= ENSG00000124587.13 TPM= 5.79 Transcript Type= NA
chr6	42963863	42979199	42963863	42979199	-	transcript2177.chr6.nnic@PEX6	transcript2177.chr6.nnic	protein_coding	42978269,42974875,42974003,42969885,42969668,42968874,42968290,42967368,42966782,42966525,42966242,42966044,42965681,42965252,42965075,42963863	42979199,42975038,42974086,42969987,42969801,42968985,42968498,42967563,42966858,42966657,42966447,42966105,42965789,42965368,42965152,42963921	Gene ID= ENSG00000124587.13 TPM= 1.93 Transcript Type= NA
chr6	42984550	43012342	42984550	43012342	+	transcript2185.chr6.nnic@PPP2R5D	transcript2185.chr6.nnic	protein_coding	42984550,42989611,43006463,43006911,43007196,43007414,43007935,43008201,43008367,43008693,43009057,43009322,43010468,43010664,43010881,43011149,43012161	42984704,42989688,43006679,43007110,43007306,43007506,43008065,43008260,43008475,43008746,43009227,43009449,43010569,43010736,43010997,43011651,43012342	Gene ID= ENSG00000112640.14 TPM= 2.41 Transcript Type= NA
chr6	42984553	43012342	42984553	43012342	+	ENST00000394110.7@PPP2R5D	ENST00000394110.7	protein_coding	42984553,42989611,43006463,43006934,43007196,43007414,43007935,43008201,43008367,43008693,43009057,43009322,43010468,43010664,43010881,43011149	42984704,42989688,43006606,43007110,43007306,43007506,43008065,43008260,43008475,43008746,43009227,43009449,43010569,43010736,43010997,43012342	Gene ID= ENSG00000112640.14 TPM= 15.93 Transcript Type= protein_coding
chr6	42984499	43012342	42984499	43012342	+	ENST00000485511.5@PPP2R5D	ENST00000485511.5	protein_coding	42984499,42989611,43006463,43006911,43007196,43007414,43007935,43008201,43008367,43008693,43009057,43009322,43010468,43010664,43010881,43011149	42984704,42989688,43006679,43007110,43007306,43007506,43008065,43008260,43008475,43008746,43009227,43009449,43010569,43010736,43010997,43012342	Gene ID= ENSG00000112640.14 TPM= 20.27 Transcript Type= protein_coding
chr6	43012227	43013971	43012227	43013971	-	transcript2190.chr6.nnic@MEA1	transcript2190.chr6.nnic	protein_coding	43013898,43013115,43012926,43012227	43013971,43013389,43013028,43012621	Gene ID= ENSG00000124733.3 TPM= 30.89 Transcript Type= NA
chr6	43014103	43021298	43014103	43021298	+	ENST00000244670.12@KLHDC3	ENST00000244670.12	protein_coding	43014103,43017134,43017519,43018145,43018343,43018633,43018863,43019092,43019288,43020667	43014348,43017346,43017695,43018216,43018556,43018719,43018971,43019165,43019366,43021298	Gene ID= ENSG00000124702.17 TPM= 8.04 Transcript Type= protein_coding
chr6	43014213	43021298	43014213	43021298	+	ENST00000326974.8@KLHDC3	ENST00000326974.8	protein_coding	43014213,43017134,43017519,43017853,43018145,43018343,43018633,43018863,43019092,43019288,43020667	43014348,43017346,43017695,43017968,43018216,43018556,43018719,43018971,43019165,43019366,43021298	Gene ID= ENSG00000124702.17 TPM= 210.76 Transcript Type= protein_coding
chr6	43021645	43029597	43021645	43029597	+	ENST00000244496.5@RRP36	ENST00000244496.5	protein_coding	43021645,43024985,43025263,43026037,43027178,43027360,43029092	43021784,43025132,43025329,43026141,43027252,43027477,43029597	Gene ID= ENSG00000124541.6 TPM= 41.51 Transcript Type= protein_coding
chr6	43037620	43053945	43037620	43053945	-	ENST00000535468.1@CUL7	ENST00000535468.1	protein_coding	43053711,43052113,43051612,43050968,43050260,43049963,43049407,43048332,43048148,43046880,43046511,43046236,43045986,43045587,43045227,43044752,43043448,43043074,43042802,43040915,43040530,43040156,43038842,43038566,43038267,43037620	43053945,43052796,43051763,43051468,43050398,43050159,43049662,43048569,43048253,43047107,43046601,43046407,43046091,43045682,43045402,43044885,43043630,43043180,43042984,43041075,43040746,43040426,43038987,43038692,43038472,43038011	Gene ID= ENSG00000044090.8 TPM= 6.27 Transcript Type= protein_coding
chr6	43049109	43053913	43049109	43053913	-	transcript2211.chr6.nic@CUL7	transcript2211.chr6.nic	protein_coding	43053622,43052209,43051612,43050968,43050260,43049109	43053913,43052796,43051763,43051468,43050398,43050159	Gene ID= ENSG00000044090.8 TPM= 3.86 Transcript Type= NA
chr6	43037617	43053699	43037617	43053699	-	ENST00000265348.7@CUL7	ENST00000265348.7	protein_coding	43053622,43052209,43051612,43050968,43050260,43049963,43049407,43048332,43048148,43046880,43046511,43046236,43045986,43045587,43045227,43044752,43043448,43043074,43042802,43040915,43040530,43040156,43038842,43038566,43038267,43037617	43053699,43052796,43051763,43051468,43050398,43050159,43049662,43048569,43048253,43047107,43046601,43046407,43046091,43045682,43045402,43044885,43043630,43043180,43042984,43041075,43040746,43040426,43038987,43038692,43038472,43038011	Gene ID= ENSG00000044090.8 TPM= 7.24 Transcript Type= protein_coding
chr6	43059594	43075099	43059594	43075099	+	ENST00000347162.9@KLC4	ENST00000347162.9	protein_coding	43059594,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622	43059685,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075099	Gene ID= ENSG00000137171.14 TPM= 10.62 Transcript Type= protein_coding
chr6	43054029	43059806	43054029	43059806	-	ENST00000388752.7@MRPL2	ENST00000388752.7	protein_coding	43059286,43058065,43056307,43056081,43055897,43055545,43054029	43059806,43058233,43056445,43056196,43056007,43055618,43054486	Gene ID= ENSG00000112651.11 TPM= 10.62 Transcript Type= protein_coding
chr6	43054235	43059434	43054235	43059434	-	ENST00000489623.1@MRPL2	ENST00000489623.1	protein_coding	43059286,43058065,43054235	43059434,43058233,43054486	Gene ID= ENSG00000112651.11 TPM= 5.79 Transcript Type= protein_coding
chr6	43171299	43181507	43171299	43181507	+	ENST00000265354.5@SRF	ENST00000265354.5	protein_coding	43171299,43173847,43175706,43176548,43178294,43178806,43179095	43172169,43174113,43175967,43176667,43178485,43178882,43181507	Gene ID= ENSG00000112658.7 TPM= 16.41 Transcript Type= protein_coding
chr6	43225629	43229484	43225629	43229484	-	ENST00000230431.10@DNPH1	ENST00000230431.10	protein_coding	43229261,43226327,43226033,43225629	43229484,43226395,43226143,43225881	Gene ID= ENSG00000112667.12 TPM= 92.67 Transcript Type= protein_coding
chr6	43225635	43229478	43225635	43229478	-	ENST00000393987.2@DNPH1	ENST00000393987.2	protein_coding	43229261,43226327,43225635	43229478,43226395,43226143	Gene ID= ENSG00000112667.12 TPM= 9.65 Transcript Type= protein_coding
chr6	43331489	43369686	43331489	43369686	-	transcript2254.chr6.nic@ZNF318	transcript2254.chr6.nic	protein_coding	43368967,43365292,43357126,43354664,43352377,43348324,43342676,43331489	43369686,43365440,43357765,43356145,43352476,43348625,43342879,43331852	Gene ID= ENSG00000171467.15 TPM= 3.86 Transcript Type= NA
chr6	43427887	43450425	43427887	43450425	+	transcript2231.chr6.nnic@ABCC10	transcript2231.chr6.nnic	protein_coding	43427887,43432142,43434621,43435751,43436138,43437934,43438624,43441862,43442970,43443933,43444159,43444788,43445125,43445599,43446277,43447248,43447684,43448881,43449107,43449422,43449929	43427967,43433360,43434848,43435907,43436247,43438013,43438795,43441960,43443159,43444010,43444353,43444938,43445314,43445942,43446446,43447408,43447937,43449026,43449204,43449534,43450425	Gene ID= ENSG00000124574.14 TPM= 4.83 Transcript Type= NA
chr6	43477523	43506556	43477523	43506556	+	ENST00000436109.6@TJAP1	ENST00000436109.6	protein_coding	43477523,43497881,43498978,43500744,43501526,43502283,43503401,43503623,43504761	43477628,43497977,43499100,43500772,43501687,43502349,43503508,43503706,43506556	Gene ID= ENSG00000137221.14 TPM= 48.27 Transcript Type= protein_coding
chr6	43517022	43521526	43517022	43521526	+	ENST00000372389.7@POLR1C	ENST00000372389.7	protein_coding	43517022,43517306,43519333,43519706,43520066,43520275,43520625,43520932,43521182	43517178,43517377,43519440,43519838,43520185,43520427,43520774,43521048,43521526	Gene ID= ENSG00000171453.17 TPM= 6.76 Transcript Type= protein_coding
chr6	43511827	43516990	43511827	43516990	-	ENST00000372422.6@YIPF3	ENST00000372422.6	protein_coding	43516727,43515889,43515595,43513588,43513359,43513069,43512761,43512440,43511827	43516990,43516095,43515701,43513633,43513451,43513200,43512874,43512563,43512315	Gene ID= ENSG00000137207.11 TPM= 95.64 Transcript Type= protein_coding
chr6	43511827	43516938	43511827	43516938	-	transcript2250.chr6.nic@YIPF3	transcript2250.chr6.nic	protein_coding	43516727,43515889,43515595,43513588,43513359,43513069,43512761,43512440,43511827	43516938,43516187,43515701,43513633,43513451,43513200,43512874,43512563,43512315	Gene ID= ENSG00000137207.11 TPM= 13.59 Transcript Type= NA
chr6	43511827	43516959	43511827	43516959	-	transcript2255.chr6.nic@YIPF3	transcript2255.chr6.nic	protein_coding	43516727,43515889,43513588,43513359,43513069,43512761,43512440,43511827	43516959,43516095,43513633,43513451,43513200,43512874,43512563,43512315	Gene ID= ENSG00000137207.11 TPM= 7.32 Transcript Type= NA
chr6	43511840	43516985	43511840	43516985	-	ENST00000510102.5@YIPF3	ENST00000510102.5	protein_coding	43516727,43515889,43515606,43513588,43513359,43513069,43512761,43512440,43511840	43516985,43516187,43515701,43513633,43513451,43513200,43512874,43512563,43512315	Gene ID= ENSG00000137207.11 TPM= 12.79 Transcript Type= nonsense_mediated_decay
chr6	43522330	43576075	43522330	43576075	-	ENST00000265351.11@XPO5	ENST00000265351.11	protein_coding	43575760,43573480,43572506,43570857,43570502,43568711,43567169,43565660,43562247,43560924,43560178,43558501,43555836,43553373,43551298,43549893,43549489,43548261,43547608,43546571,43533907,43531479,43530688,43528828,43528159,43527634,43526685,43525839,43525107,43524831,43524471,43522330	43576075,43573601,43572578,43570994,43570684,43568737,43567354,43565736,43562346,43561007,43560303,43558591,43555964,43553503,43551453,43549934,43549578,43548460,43547707,43546752,43534007,43531575,43530824,43528925,43528205,43527731,43526747,43525921,43525214,43524968,43524635,43524005	Gene ID= ENSG00000124571.17 TPM= 6.76 Transcript Type= protein_coding
chr6	43576150	43615660	43576150	43615660	+	ENST00000372236.8@POLH	ENST00000372236.8	protein_coding	43576150,43582316,43583007,43587272,43597696,43600988,43603892,43604615,43605254,43610554,43613660	43576440,43582456,43583141,43587489,43597865,43601091,43604011,43604738,43605319,43610723,43615660	Gene ID= ENSG00000170734.11 TPM= 2.9 Transcript Type= protein_coding
chr6	43620490	43623367	43620490	43623367	-	transcript2269.chr6.nic@GTPBP2	transcript2269.chr6.nic	protein_coding	43622003,43620490	43623367,43621790	Gene ID= ENSG00000172432.18 TPM= 5.79 Transcript Type= NA
chr6	43620490	43629162	43620490	43629162	-	ENST00000307126.9@GTPBP2	ENST00000307126.9	protein_coding	43628977,43626922,43626226,43625756,43625363,43624888,43624510,43623933,43623737,43622633,43622003,43620490	43629162,43626948,43626410,43625864,43625560,43625062,43624729,43624068,43623795,43622804,43622167,43621790	Gene ID= ENSG00000172432.18 TPM= 15.44 Transcript Type= protein_coding
chr6	43635819	43640952	43635819	43640952	+	ENST00000372171.4@MAD2L1BP	ENST00000372171.4	protein_coding	43635819,43636381,43640021	43635921,43636646,43640952	Gene ID= ENSG00000124688.13 TPM= 33.3 Transcript Type= protein_coding
chr6	43629540	43640919	43629540	43640919	+	ENST00000451025.6@MAD2L1BP	ENST00000451025.6	protein_coding	43629540,43633194,43636381,43640021	43629769,43633315,43636646,43640919	Gene ID= ENSG00000124688.13 TPM= 2.41 Transcript Type= protein_coding
chr6	43671303	43687791	43671303	43687791	-	ENST00000372133.7@MRPS18A	ENST00000372133.7	protein_coding	43687668,43681089,43678518,43675494,43675202,43671303	43687791,43681120,43678625,43675617,43675271,43671906	Gene ID= ENSG00000096080.11 TPM= 91.7 Transcript Type= protein_coding
chr6	43770184	43778764	43770184	43778764	+	ENST00000476772.5@VEGFA	ENST00000476772.5	protein_coding	43770184,43774341,43777469,43778460	43771312,43774392,43777665,43778764	Gene ID= ENSG00000112715.21 TPM= 4.34 Transcript Type= retained_intron
chr6	44113694	44127454	44113694	44127454	-	transcript2320.chr6.nnic@MRPL14	transcript2320.chr6.nnic	protein_coding	44127255,44116541,44113694	44127454,44116629,44114209	Gene ID= ENSG00000180992.6 TPM= 8.69 Transcript Type= NA
chr6	44113454	44127457	44113454	44127457	-	ENST00000372014.4@MRPL14	ENST00000372014.4	protein_coding	44127344,44116541,44113454	44127457,44116629,44114209	Gene ID= ENSG00000180992.6 TPM= 6.76 Transcript Type= protein_coding
chr6	44127555	44155518	44127555	44155518	+	transcript2314.chr6.nic@TMEM63B	transcript2314.chr6.nic	protein_coding	44127555,44134561,44135017,44136349,44138480,44139467,44139708,44140252,44141028,44146847,44147377,44148252,44148513,44148792,44149859,44150224,44150564,44151846,44152593,44153676,44154073,44154365,44154692	44127678,44134743,44135096,44136439,44138517,44139609,44139759,44140360,44141098,44146927,44147500,44148385,44148650,44148945,44149965,44150310,44150629,44152008,44152698,44153843,44154188,44154445,44155518	Gene ID= ENSG00000137216.18 TPM= 9.17 Transcript Type= NA
chr6	44135033	44155519	44135033	44155519	+	ENST00000371893.6@TMEM63B	ENST00000371893.6	protein_coding	44135033,44136349,44138480,44139467,44139708,44140252,44141028,44146847,44147377,44148252,44148513,44148792,44149859,44150224,44150564,44151846,44152593,44153676,44154073,44154365,44154692	44135096,44136439,44138517,44139609,44139759,44140360,44141098,44146927,44147500,44148385,44148650,44148945,44149965,44150310,44150629,44152008,44152698,44153843,44154188,44154445,44155519	Gene ID= ENSG00000137216.18 TPM= 6.27 Transcript Type= protein_coding
chr6	44219544	44234141	44219544	44234141	+	transcript2324.chr6.nnic@SLC29A1	transcript2324.chr6.nnic	protein_coding	44219544,44221586,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44219782,44221685,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 5.93 Transcript Type= NA
chr6	44219625	44234141	44219625	44234141	+	transcript2326.chr6.nnic@SLC29A1	transcript2326.chr6.nnic	protein_coding	44219625,44226061,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44219782,44226167,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 4.96 Transcript Type= NA
chr6	44223560	44234141	44223560	44234141	+	transcript2327.chr6.nic@SLC29A1	transcript2327.chr6.nic	protein_coding	44223560,44226061,44227260,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44223641,44226167,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 7.54 Transcript Type= NA
chr6	44219505	44234151	44219505	44234151	+	ENST00000393844.5@SLC29A1	ENST00000393844.5	protein_coding	44219505,44227260,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44219782,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234151	Gene ID= ENSG00000112759.16 TPM= 13.2 Transcript Type= protein_coding
chr6	44226988	44234141	44226988	44234141	+	transcript2337.chr6.nnic@SLC29A1	transcript2337.chr6.nnic	protein_coding	44226988,44227260,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44227039,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 5.61 Transcript Type= NA
chr6	44219607	44242364	44219607	44242364	+	transcript2343.chr6.nnic@SLC29A1	transcript2343.chr6.nnic	protein_coding	44219607,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44242184	44219782,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44242364	Gene ID= ENSG00000112759.16 TPM= 1.93 Transcript Type= NA
chr6	44223565	44234141	44223565	44234141	+	ENST00000371755.7@SLC29A1	ENST00000371755.7	protein_coding	44223565,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44223641,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 16.55 Transcript Type= protein_coding
chr6	44223565	44234141	44223565	44234141	+	ENST00000371740.9@SLC29A1	ENST00000371740.9	protein_coding	44223565,44226061,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44223641,44226167,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 9.79 Transcript Type= protein_coding
chr6	44223823	44234141	44223823	44234141	+	ENST00000371713.5@SLC29A1	ENST00000371713.5	protein_coding	44223823,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44223955,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 4.96 Transcript Type= protein_coding
chr6	44247087	44253883	44247087	44253883	+	ENST00000353801.7@HSP90AB1	ENST00000353801.7	protein_coding	44247087,44248617,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489	44247195,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253883	Gene ID= ENSG00000096384.19 TPM= 40.4 Transcript Type= protein_coding
chr6	44246166	44253888	44246166	44253888	+	ENST00000620073.4@HSP90AB1	ENST00000620073.4	protein_coding	44246166,44248630,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489	44246344,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253888	Gene ID= ENSG00000096384.19 TPM= 11.08 Transcript Type= protein_coding
chr6	44247087	44253886	44247087	44253886	+	ENST00000371646.9@HSP90AB1	ENST00000371646.9	protein_coding	44247087,44248630,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489	44247195,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253886	Gene ID= ENSG00000096384.19 TPM= 4228.31 Transcript Type= protein_coding
chr6	44254106	44257554	44254106	44257554	-	ENST00000393812.3@SLC35B2	ENST00000393812.3	protein_coding	44257400,44256685,44256342,44254106	44257554,44256878,44256496,44255644	Gene ID= ENSG00000157593.18 TPM= 108.19 Transcript Type= protein_coding
chr6	44254096	44257554	44254096	44257554	-	ENST00000495706.1@SLC35B2	ENST00000495706.1	protein_coding	44257400,44256342,44254096	44257554,44256496,44255644	Gene ID= ENSG00000157593.18 TPM= 3.62 Transcript Type= processed_transcript
chr6	44254102	44257352	44254102	44257352	-	ENST00000619636.4@SLC35B2	ENST00000619636.4	protein_coding	44257182,44256685,44256342,44254102	44257352,44256878,44256496,44255644	Gene ID= ENSG00000157593.18 TPM= 3.94 Transcript Type= protein_coding
chr6	44258166	44265788	44258166	44265788	-	ENST00000275015.9@NFKBIE	ENST00000275015.9	protein_coding	44264982,44262560,44261626,44260451,44260043,44258166	44265788,44262662,44261848,44260539,44260282,44259284	Gene ID= ENSG00000146232.15 TPM= 1.93 Transcript Type= protein_coding
chr6	44387525	44450426	44387525	44450426	+	ENST00000371477.3@CDC5L	ENST00000371477.3	protein_coding	44387525,44390268,44392667,44393446,44396341,44403809,44406323,44408444,44419449,44422647,44424419,44426103,44426482,44429713,44445655,44446607	44387868,44390371,44392828,44393573,44396440,44404027,44406467,44408632,44419597,44422809,44424583,44426183,44426724,44429910,44445867,44450426	Gene ID= ENSG00000096401.7 TPM= 2.9 Transcript Type= protein_coding
chr6	44387538	44447039	44387538	44447039	+	transcript2421.chr6.nnic@CDC5L	transcript2421.chr6.nnic	protein_coding	44387538,44390268,44392667,44393446,44396341,44403809,44406323,44408444,44419449,44422647,44424419,44426103,44426482,44445655,44446607	44387868,44390371,44392828,44393573,44396440,44404027,44406467,44408632,44419597,44422809,44424583,44426183,44426724,44445867,44447039	Gene ID= ENSG00000096401.7 TPM= 1.93 Transcript Type= NA
chr6	44829718	45106006	44829718	45106006	-	transcript2431.chr6.nnic@SUPT3H	transcript2431.chr6.nnic	protein_coding	45105922,45020546,45014801,45003653,44961753,44953310,44932653,44829718	45106006,45020632,45014891,45003792,44961828,44953417,44932763,44829857	Gene ID= ENSG00000196284.15 TPM= 1.93 Transcript Type= NA
chr6	45901768	46015898	45901768	46015898	-	transcript2436.chr6.nic@CLIC5	transcript2436.chr6.nic	protein_coding	46015480,45955135,45949256,45941547,45914228,45913778,45901768	46015898,45955244,45949381,45941653,45914409,45913812,45903255	Gene ID= ENSG00000112782.15 TPM= 3.86 Transcript Type= NA
chr6	45911623	46015898	45911623	46015898	-	transcript2438.chr6.nnic@CLIC5	transcript2438.chr6.nnic	protein_coding	46015480,45955135,45949256,45941547,45914228,45913778,45911623	46015898,45955244,45949381,45941653,45914409,45913812,45912739	Gene ID= ENSG00000112782.15 TPM= 11.58 Transcript Type= NA
chr6	45913141	46015898	45913141	46015898	-	transcript2440.chr6.nnic@CLIC5	transcript2440.chr6.nnic	protein_coding	46015480,45955135,45949256,45941547,45914228,45913778,45913141	46015898,45955244,45949381,45941653,45914409,45913812,45913551	Gene ID= ENSG00000112782.15 TPM= 5.79 Transcript Type= NA
chr6	45901761	46015849	45901761	46015849	-	ENST00000339561.10@CLIC5	ENST00000339561.10	protein_coding	46015480,45955135,45949256,45941547,45914228,45901761	46015849,45955244,45949381,45941653,45914409,45903255	Gene ID= ENSG00000112782.15 TPM= 25.1 Transcript Type= protein_coding
chr6	45898945	45901259	45898945	45901259	-	transcript2449.chr6.nnic@NA	transcript2449.chr6.nnic	NA	45898945	45901259	Gene ID= novel_gene_chr6_2450 TPM= 52.13 Transcript Type= NA
chr6	45899577	45900540	45899577	45900540	+	transcript2447.chr6.nnic@NA	transcript2447.chr6.nnic	NA	45899577	45900540	Gene ID= novel_gene_chr6_2448 TPM= 3.86 Transcript Type= NA
chr6	45909042	45910857	45909042	45910857	-	transcript2451.chr6.nnic@NA	transcript2451.chr6.nnic	NA	45909042	45910857	Gene ID= novel_gene_chr6_2452 TPM= 1.93 Transcript Type= NA
chr6	46014971	46015789	46014971	46015789	-	transcript2455.chr6.nnic@NA	transcript2455.chr6.nnic	NA	46014971	46015789	Gene ID= novel_gene_chr6_2456 TPM= 1.93 Transcript Type= NA
chr6	46129993	46146699	46129993	46146699	+	ENST00000321037.4@ENPP4	ENST00000321037.4	protein_coding	46129993,46139551,46141052,46143276	46130189,46140409,46141222,46146699	Gene ID= ENSG00000001561.6 TPM= 13.51 Transcript Type= protein_coding
chr6	46160415	46170971	46160415	46170971	-	ENST00000230565.3@ENPP5	ENST00000230565.3	protein_coding	46170808,46167434,46165387,46160415	46170971,46168297,46165563,46161753	Gene ID= ENSG00000112796.9 TPM= 5.79 Transcript Type= protein_coding
chr6	46221468	46325672	46221468	46325672	-	ENST00000405162.2@RCAN2	ENST00000405162.2	protein_coding	46325393,46248723,46246748,46223144,46221468	46325672,46248896,46246919,46223301,46223140	Gene ID= ENSG00000172348.14 TPM= 4.83 Transcript Type= protein_coding
chr6	46220736	46325668	46220736	46325668	-	ENST00000330430.10@RCAN2	ENST00000330430.10	protein_coding	46325393,46248723,46246748,46220736	46325668,46248896,46246919,46223301	Gene ID= ENSG00000172348.14 TPM= 63.71 Transcript Type= protein_coding
chr6	46456753	46491438	46456753	46491438	-	transcript2475.chr6.nic@RCAN2	transcript2475.chr6.nic	protein_coding	46491173,46456753	46491438,46456978	Gene ID= ENSG00000172348.14 TPM= 1.93 Transcript Type= NA
chr6	46852512	46921977	46852512	46921977	-	ENST00000283296.11@ADGRF5	ENST00000283296.11	protein_coding	46921713,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46852512	46921977,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854071	Gene ID= ENSG00000069122.18 TPM= 4.83 Transcript Type= protein_coding
chr6	46877393	46921938	46877393	46921938	-	transcript2487.chr6.nic@ADGRF5	transcript2487.chr6.nic	protein_coding	46921713,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46877393	46921938,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405	Gene ID= ENSG00000069122.18 TPM= 1.93 Transcript Type= NA
chr6	46852599	46954943	46852599	46954943	-	ENST00000265417.7@ADGRF5	ENST00000265417.7	protein_coding	46954734,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46852599	46954943,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854071	Gene ID= ENSG00000069122.18 TPM= 4.83 Transcript Type= protein_coding
chr6	47231532	47309935	47231532	47309935	-	transcript2490.chr6.nic@TNFRSF21	transcript2490.chr6.nic	protein_coding	47309416,47283938,47253256,47234670,47231532	47309935,47286595,47253521,47234898,47232994	Gene ID= ENSG00000146072.6 TPM= 1.93 Transcript Type= NA
chr6	47231532	47309905	47231532	47309905	-	ENST00000296861.2@TNFRSF21	ENST00000296861.2	protein_coding	47309416,47285944,47283938,47253256,47234670,47231532	47309905,47286595,47284432,47253521,47234898,47232994	Gene ID= ENSG00000146072.6 TPM= 12.55 Transcript Type= protein_coding
chr6	49430360	49463191	49430360	49463191	-	ENST00000274813.3@MUT	ENST00000274813.3	protein_coding	49463103,49459082,49457691,49456080,49453585,49451466,49448816,49447670,49444639,49441840,49440206,49435456,49430360	49463191,49459505,49458058,49456237,49453756,49451714,49448927,49447785,49444754,49441971,49440353,49435623,49431856	Gene ID= ENSG00000146085.7 TPM= 5.79 Transcript Type= protein_coding
chr6	52671109	52686588	52671109	52686588	+	ENST00000211314.4@TMEM14A	ENST00000211314.4	protein_coding	52671109,52677087,52681813,52684078,52686010	52671245,52677172,52681914,52684165,52686588	Gene ID= ENSG00000096092.5 TPM= 4.83 Transcript Type= protein_coding
chr6	52977953	52995378	52977953	52995378	-	ENST00000370963.8@GSTA4	ENST00000370963.8	protein_coding	52995249,52994157,52987357,52985451,52984464,52982574,52977953	52995378,52994261,52987408,52985583,52984605,52982705,52978592	Gene ID= ENSG00000170899.10 TPM= 14.48 Transcript Type= protein_coding
chr6	53065391	53098373	53065391	53098373	+	transcript2533.chr6.nnic@FBXO9	transcript2533.chr6.nnic	protein_coding	53065391,53071057,53073481,53076486,53078799,53080968,53082504,53092429,53092734,53093466,53093885,53094692,53095513,53097722	53065792,53071143,53073643,53076543,53078898,53081098,53082618,53092547,53092824,53093561,53093978,53094841,53095664,53098373	Gene ID= ENSG00000112146.16 TPM= 8.93 Transcript Type= NA
chr6	53065426	53098373	53065426	53098373	+	transcript2542.chr6.nnic@FBXO9	transcript2542.chr6.nnic	protein_coding	53065426,53071057,53073481,53076486,53078799,53080968,53082504,53092429,53092734,53093466,53093885,53095513,53097722	53065643,53071143,53073643,53076543,53078898,53081098,53082618,53092547,53092824,53093561,53093978,53095664,53098373	Gene ID= ENSG00000112146.16 TPM= 3.62 Transcript Type= NA
chr6	53065391	53098373	53065391	53098373	+	transcript2544.chr6.nnic@FBXO9	transcript2544.chr6.nnic	protein_coding	53065391,53071057,53073481,53076486,53078799,53080968,53082504,53092429,53092734,53093885,53095513,53097722	53065792,53071143,53073643,53076543,53078898,53081098,53082618,53092547,53093561,53093978,53095664,53098373	Gene ID= ENSG00000112146.16 TPM= 7 Transcript Type= NA
chr6	53065391	53098373	53065391	53098373	+	transcript2548.chr6.nnic@FBXO9	transcript2548.chr6.nnic	protein_coding	53065391,53071057,53073481,53076486,53082504,53092429,53092734,53093466,53093885,53095513,53097722	53065792,53071143,53073643,53076543,53082618,53092547,53092824,53093561,53093978,53095664,53098373	Gene ID= ENSG00000112146.16 TPM= 7.48 Transcript Type= NA
chr6	53267399	53349007	53267399	53349007	-	ENST00000304434.10@ELOVL5	ENST00000304434.10	protein_coding	53348817,53295642,53291776,53276179,53275090,53273220,53270593,53267399	53349007,53295707,53291963,53276256,53275261,53273344,53270727,53269270	Gene ID= ENSG00000012660.13 TPM= 11.1 Transcript Type= protein_coding
chr6	53267398	53349179	53267398	53349179	-	ENST00000542638.5@ELOVL5	ENST00000542638.5	protein_coding	53348817,53295642,53291776,53276179,53275090,53270593,53267398	53349179,53295707,53291963,53276256,53275261,53270727,53269270	Gene ID= ENSG00000012660.13 TPM= 2.41 Transcript Type= protein_coding
chr6	53497341	53545129	53497341	53545129	-	ENST00000229416.10@GCLC	ENST00000229416.10	protein_coding	53544496,53522415,53520778,53516109,53514439,53514204,53509176,53508595,53507480,53506913,53505803,53505392,53500432,53500247,53500045,53497341	53545129,53522527,53520960,53516222,53514497,53514337,53509250,53508711,53507618,53507025,53505895,53505496,53500513,53500350,53500165,53498967	Gene ID= ENSG00000001084.10 TPM= 2.9 Transcript Type= protein_coding
chr6	53647901	53665708	53647901	53665708	-	ENST00000370905.3@KLHL31	ENST00000370905.3	protein_coding	53665601,53654101,53647901	53665708,53655305,53652330	Gene ID= ENSG00000124743.5 TPM= 117.77 Transcript Type= protein_coding
chr6	54018897	54266280	54018897	54266280	+	transcript2563.chr6.nic@MLIP	transcript2563.chr6.nic	protein_coding	54018897,54121447,54124473,54136715,54149056,54160367,54160516,54160740,54169528,54189870,54202105,54230714,54257308,54265950	54019091,54121602,54124865,54138286,54149127,54160432,54160599,54160799,54169572,54189914,54202233,54230917,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 38.49 Transcript Type= NA
chr6	54083392	54266280	54083392	54266280	+	transcript2564.chr6.nnic@MLIP	transcript2564.chr6.nnic	protein_coding	54083392,54121447,54124473,54136715,54149056,54160367,54160516,54160740,54169528,54189870,54202105,54230714,54257308,54265950	54083616,54121602,54124865,54138286,54149127,54160432,54160599,54160799,54169572,54189914,54202233,54230917,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 34.46 Transcript Type= NA
chr6	54083392	54266280	54083392	54266280	+	transcript2570.chr6.nnic@MLIP	transcript2570.chr6.nnic	protein_coding	54083392,54121447,54124473,54136715,54149056,54160367,54160516,54160740,54169528,54189870,54202105,54257308,54265950	54083616,54121602,54124865,54138286,54149127,54160432,54160599,54160799,54169572,54189914,54202233,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 24.62 Transcript Type= NA
chr6	54018897	54266280	54018897	54266280	+	transcript2580.chr6.nic@MLIP	transcript2580.chr6.nic	protein_coding	54018897,54121447,54124473,54169528,54189870,54202105,54230714,54257308,54265950	54019091,54121602,54124865,54169572,54189914,54202233,54230917,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 4.37 Transcript Type= NA
chr6	54018916	54266280	54018916	54266280	+	ENST00000274897.9@MLIP	ENST00000274897.9	protein_coding	54018916,54121447,54124473,54149056,54160367,54160516,54160740,54169528,54189870,54202105,54230714,54257308,54265950	54019091,54121602,54124865,54149127,54160432,54160599,54160799,54169572,54189914,54202233,54230917,54257361,54266280	Gene ID= ENSG00000146147.14 TPM= 9.2 Transcript Type= protein_coding
chr6	54018924	54020367	54018924	54020367	+	transcript2586.chr6.nnic@NA	transcript2586.chr6.nnic	NA	54018924	54020367	Gene ID= novel_gene_chr6_2587 TPM= 1.93 Transcript Type= NA
chr6	54025006	54027294	54025006	54027294	-	transcript2588.chr6.nnic@NA	transcript2588.chr6.nnic	NA	54025006	54027294	Gene ID= novel_gene_chr6_2589 TPM= 13.51 Transcript Type= NA
chr6	54141314	54143460	54141314	54143460	-	transcript2590.chr6.nnic@NA	transcript2590.chr6.nnic	NA	54141314	54143460	Gene ID= novel_gene_chr6_2591 TPM= 1.93 Transcript Type= NA
chr6	55753645	55875564	55753645	55875564	-	ENST00000370830.3@BMP5	ENST00000370830.3	protein_coding	55874376,55819655,55794279,55774049,55760457,55759005,55753645	55875564,55819847,55794427,55774243,55760533,55759115,55755682	Gene ID= ENSG00000112175.7 TPM= 2.9 Transcript Type= protein_coding
chr6	56611508	56843510	56611508	56843510	-	transcript2601.chr6.nic@DST	transcript2601.chr6.nic	protein_coding	56843055,56735228,56704280,56701888,56699653,56670641,56651132,56650926,56648570,56646087,56645866,56642410,56641947,56640143,56639929,56639696,56639450,56639259,56636557,56635589,56634801,56634462,56634132,56632854,56631883,56631211,56630245,56629250,56627999,56627204,56625157,56624530,56614356,56611508	56843510,56735289,56704369,56701965,56699745,56670807,56651244,56651032,56648689,56646182,56645993,56642503,56642101,56640605,56640057,56639773,56639611,56639363,56636652,56635714,56634953,56634616,56634258,56633037,56632040,56631389,56630383,56629443,56628161,56627287,56625264,56624628,56614484,56611596	Gene ID= ENSG00000151914.19 TPM= 4.83 Transcript Type= NA
chr6	56638084	56843706	56638084	56843706	-	transcript2606.chr6.nnic@DST	transcript2606.chr6.nnic	protein_coding	56843055,56735228,56704280,56703648,56701888,56699653,56670641,56651132,56650926,56648570,56646087,56645866,56642410,56641947,56640143,56639929,56639696,56639450,56638084	56843706,56735289,56704369,56703746,56701965,56699745,56670807,56651244,56651032,56648689,56646182,56645993,56642503,56642101,56640605,56640057,56639773,56639611,56639363	Gene ID= ENSG00000151914.19 TPM= 3.86 Transcript Type= NA
chr6	56638084	56843372	56638084	56843372	-	transcript2607.chr6.nnic@DST	transcript2607.chr6.nnic	protein_coding	56843055,56735228,56704280,56703711,56701888,56699653,56670641,56651132,56650926,56648570,56646087,56645866,56642410,56641947,56640143,56639929,56639696,56639450,56638084	56843372,56735289,56704369,56703746,56701965,56699745,56670807,56651244,56651032,56648689,56646182,56645993,56642503,56642101,56640605,56640057,56639773,56639611,56639363	Gene ID= ENSG00000151914.19 TPM= 3.7 Transcript Type= NA
chr6	56638936	56693303	56638936	56693303	-	ENST00000521104.1@DST	ENST00000521104.1	protein_coding	56692388,56670641,56651132,56650926,56648570,56646087,56645866,56642410,56641947,56640143,56639929,56639696,56639450,56638936	56693303,56670807,56651244,56651032,56648689,56646182,56645993,56642503,56642101,56640605,56640057,56639773,56639611,56639363	Gene ID= ENSG00000151914.19 TPM= 1.93 Transcript Type= retained_intron
chr6	57046549	57055225	57046549	57055225	+	ENST00000370733.4@KIAA1586	ENST00000370733.4	protein_coding	57046549,57047313,57050774,57052686	57046776,57047396,57050854,57055225	Gene ID= ENSG00000168116.13 TPM= 2.9 Transcript Type= protein_coding
chr6	57046689	57170201	57046689	57170201	+	transcript2617.chr6.nnic@ZNF451	transcript2617.chr6.nnic	protein_coding	57046689,57090811,57099061,57124734,57128729,57133042,57134744,57141302,57141948,57147090,57150719,57152221,57153861,57161084,57168423	57046776,57090894,57099141,57124859,57128840,57133192,57134870,57141455,57142095,57148693,57150862,57152351,57154047,57161152,57170201	Gene ID= ENSG00000112200.16 TPM= 1.93 Transcript Type= NA
chr6	57090010	57170307	57090010	57170307	+	ENST00000370706.8@ZNF451	ENST00000370706.8	protein_coding	57090010,57090811,57099061,57124734,57128729,57133042,57134744,57141302,57141948,57147090,57150719,57152221,57153861,57161084,57168423	57090274,57090894,57099141,57124859,57128840,57133192,57134870,57141455,57142095,57148693,57150862,57152351,57154047,57161152,57170307	Gene ID= ENSG00000112200.16 TPM= 5.79 Transcript Type= protein_coding
chr6	57101357	57108501	57101357	57108501	+	transcript2634.chr6.nnic@NA	transcript2634.chr6.nnic	NA	57101357	57108501	Gene ID= novel_gene_chr6_2635 TPM= 3.86 Transcript Type= NA
chr6	57186992	57222314	57186992	57222314	-	ENST00000468148.5@RAB23	ENST00000468148.5	protein_coding	57221726,57210226,57207628,57196450,57194770,57193842,57186992	57222314,57210445,57207713,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 3.38 Transcript Type= protein_coding
chr6	57186992	57222305	57186992	57222305	-	transcript2644.chr6.nnic@RAB23	transcript2644.chr6.nnic	protein_coding	57222023,57210226,57207628,57196450,57194770,57193842,57186992	57222305,57210445,57207713,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 2.41 Transcript Type= NA
chr6	57188783	57222305	57188783	57222305	-	transcript2653.chr6.nnic@RAB23	transcript2653.chr6.nnic	protein_coding	57221726,57196450,57194770,57193842,57188783	57222305,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 2.9 Transcript Type= NA
chr6	57188783	57222309	57188783	57222309	-	transcript2654.chr6.nnic@RAB23	transcript2654.chr6.nnic	protein_coding	57222023,57196450,57194770,57193842,57188783	57222309,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 1.93 Transcript Type= NA
chr6	57908566	57961421	57908566	57961421	-	transcript2655.chr6.nnic@AL021368.4	transcript2655.chr6.nnic	processed_transcript	57961321,57961152,57959028,57930104,57926426,57924417,57919830,57908566	57961421,57961224,57959111,57930291,57926510,57924591,57919919,57913042	Gene ID= ENSG00000283352.1 TPM= 1.93 Transcript Type= NA
chr6	57946078	57961421	57946078	57961421	-	transcript2660.chr6.nnic@LINC00680	transcript2660.chr6.nnic	transcribed_unprocessed_pseudogene	57961321,57961152,57959028,57949358,57948873,57946078	57961421,57961224,57959111,57950011,57949068,57947177	Gene ID= ENSG00000215190.9 TPM= 2.25 Transcript Type= NA
chr6	57946074	57961501	57946074	57961501	-	ENST00000450081.5@LINC00680	ENST00000450081.5	transcribed_unprocessed_pseudogene	57961321,57961152,57959028,57948918,57946074	57961501,57961224,57959111,57949068,57947177	Gene ID= ENSG00000215190.9 TPM= 1.28 Transcript Type= processed_transcript
chr6	57946078	57961380	57946078	57961380	-	ENST00000418368.1@LINC00680	ENST00000418368.1	transcribed_unprocessed_pseudogene	57961321,57961152,57959028,57949859,57948873,57946078	57961380,57961224,57959111,57950011,57949068,57947177	Gene ID= ENSG00000215190.9 TPM= 1.28 Transcript Type= processed_transcript
chr6	63572012	63583587	63572012	63583587	+	ENST00000370651.5@PTP4A1	ENST00000370651.5	protein_coding	63572012,63576436,63578437,63578898,63579257,63580057	63572719,63576985,63578529,63579028,63579331,63583587	Gene ID= ENSG00000112245.10 TPM= 922.84 Transcript Type= protein_coding
chr6	63576488	63581462	63576488	63581462	+	ENST00000626021.2@PTP4A1	ENST00000626021.2	protein_coding	63576488,63578437,63578898,63579257,63580057	63576985,63578529,63579028,63579331,63581462	Gene ID= ENSG00000112245.10 TPM= 26.06 Transcript Type= protein_coding
chr6	63635835	63694690	63635835	63694690	+	transcript2684.chr6.nic@PHF3	transcript2684.chr6.nic	protein_coding	63635835,63646527,63680000,63684129,63691737,63694581	63636150,63646795,63680161,63685911,63692043,63694690	Gene ID= ENSG00000118482.11 TPM= 5.31 Transcript Type= NA
chr6	63635798	63694690	63635798	63694690	+	transcript2687.chr6.nic@PHF3	transcript2687.chr6.nic	protein_coding	63635798,63680000,63684129,63691737,63694581	63636150,63680161,63685911,63692043,63694690	Gene ID= ENSG00000118482.11 TPM= 5.31 Transcript Type= NA
chr6	63807308	63822699	63807308	63822699	+	transcript2693.chr6.nnic@AL354719.2	transcript2693.chr6.nnic	antisense_RNA	63807308,63821240	63807395,63822699	Gene ID= ENSG00000236345.1 TPM= 1.93 Transcript Type= NA
chr6	69675802	69797111	69675802	69797111	-	ENST00000370577.7@LMBRD1	ENST00000370577.7	protein_coding	69796813,69790296,69780494,69752259,69749341,69741789,69737942,69718956,69713645,69701889,69701443,69700765,69699043,69697563,69676450,69675802	69797111,69790472,69780554,69752356,69749408,69741877,69738015,69719081,69713797,69701953,69701545,69700869,69699192,69697641,69676541,69676271	Gene ID= ENSG00000168216.10 TPM= 16.41 Transcript Type= protein_coding
chr6	70566917	70589569	70566917	70589569	+	ENST00000370474.3@SDHAF4	ENST00000370474.3	protein_coding	70566917,70579414,70588615	70567004,70579566,70589569	Gene ID= ENSG00000154079.5 TPM= 4.83 Transcript Type= protein_coding
chr6	70667779	70862011	70667779	70862011	+	transcript2716.chr6.nnic@SMAP1	transcript2716.chr6.nnic	protein_coding	70667779,70670344,70672073,70732378,70754980,70773350,70791689,70798657,70836941,70852540,70856859,70857922,70860200	70668141,70670357,70672110,70732511,70755065,70773425,70791769,70798737,70837028,70852664,70857030,70858229,70862011	Gene ID= ENSG00000112305.14 TPM= 4.18 Transcript Type= NA
chr6	70667767	70862011	70667767	70862011	+	transcript2718.chr6.nnic@SMAP1	transcript2718.chr6.nnic	protein_coding	70667767,70672073,70732378,70754980,70773350,70791689,70798657,70836941,70852540,70856859,70857922,70860200	70668141,70672110,70732511,70755065,70773425,70791769,70798737,70837028,70852664,70857030,70858229,70862011	Gene ID= ENSG00000112305.14 TPM= 7.08 Transcript Type= NA
chr6	70667776	70862015	70667776	70862015	+	ENST00000370455.7@SMAP1	ENST00000370455.7	protein_coding	70667776,70732378,70754980,70773350,70791689,70798657,70836941,70852540,70856859,70857922,70860200	70668141,70732511,70755065,70773425,70791769,70798737,70837028,70852664,70857030,70858229,70862015	Gene ID= ENSG00000112305.14 TPM= 30.24 Transcript Type= protein_coding
chr6	71288803	71308950	71288803	71308950	+	ENST00000370435.4@OGFRL1	ENST00000370435.4	protein_coding	71288803,71293293,71293533,71296317,71296495,71296672,71301386	71289170,71293379,71293611,71296395,71296561,71296817,71308950	Gene ID= ENSG00000119900.7 TPM= 13.51 Transcript Type= protein_coding
chr6	73194511	73198760	73194511	73198760	+	transcript2748.chr6.nnic@NA	transcript2748.chr6.nnic	NA	73194511	73198760	Gene ID= novel_gene_chr6_2749 TPM= 4.83 Transcript Type= NA
chr6	73461737	73501050	73461737	73501050	+	transcript2750.chr6.nic@MTO1	transcript2750.chr6.nic	protein_coding	73461737,73466209,73466489,73471460,73473365,73479732,73479936,73480675,73482040,73482449,73492234,73497736,73500574	73461794,73466408,73466606,73471557,73473654,73479844,73480126,73480805,73482244,73482620,73492352,73497896,73501050	Gene ID= ENSG00000135297.15 TPM= 2.73 Transcript Type= NA
chr6	73461737	73501050	73461737	73501050	+	transcript2755.chr6.nic@MTO1	transcript2755.chr6.nic	protein_coding	73461737,73466209,73466489,73473365,73479732,73479936,73480675,73482040,73482449,73492234,73497736,73500574	73461794,73466408,73466606,73473654,73479844,73480126,73480805,73482244,73482620,73492352,73497896,73501050	Gene ID= ENSG00000135297.15 TPM= 3.7 Transcript Type= NA
chr6	73461737	73501093	73461737	73501093	+	transcript2761.chr6.nic@MTO1	transcript2761.chr6.nic	protein_coding	73461737,73466209,73466489,73473365,73479732,73479936,73480675,73482040,73482449,73492234,73500574	73462071,73466408,73466606,73473654,73479844,73480126,73480805,73482244,73482620,73492352,73501093	Gene ID= ENSG00000135297.15 TPM= 3.21 Transcript Type= NA
chr6	73517515	73521588	73517515	73521588	-	ENST00000309268.10@EEF1A1	ENST00000309268.10	protein_coding	73521000,73519883,73519337,73518932,73518698,73518354,73518030,73517515	73521588,73520056,73519516,73519228,73518848,73518610,73518264,73517934	Gene ID= ENSG00000156508.17 TPM= 311.8 Transcript Type= protein_coding
chr6	73515752	73521032	73515752	73521032	-	ENST00000615060.4@EEF1A1	ENST00000615060.4	protein_coding	73521000,73519883,73519337,73518932,73518698,73518591,73518568,73518354,73518026,73515752	73521032,73520056,73519516,73519228,73518848,73518610,73518588,73518563,73518264,73517934	Gene ID= ENSG00000156508.17 TPM= 2.9 Transcript Type= protein_coding
chr6	73594024	73654042	73594024	73654042	-	transcript2767.chr6.nnic@SLC17A5	transcript2767.chr6.nnic	protein_coding	73653793,73644407,73641691,73639937,73638412,73636621,73635382,73621804,73615315,73610400,73600351,73594024	73654042,73644603,73641924,73640050,73638499,73636707,73635500,73621962,73615447,73610547,73600441,73595214	Gene ID= ENSG00000119899.12 TPM= 1.93 Transcript Type= NA
chr6	73593379	73654155	73593379	73654155	-	ENST00000355773.5@SLC17A5	ENST00000355773.5	protein_coding	73653793,73644407,73641691,73638412,73636621,73635382,73621804,73615315,73610400,73600351,73593379	73654155,73644603,73641924,73638499,73636707,73635500,73621962,73615447,73610547,73600441,73595214	Gene ID= ENSG00000119899.12 TPM= 3.86 Transcript Type= protein_coding
chr6	75237787	75243795	75237787	75243795	-	ENST00000509698.5@COX7A2	ENST00000509698.5	protein_coding	75243717,75241176,75240277,75237787	75243795,75241265,75240385,75237988	Gene ID= ENSG00000112695.11 TPM= 99.43 Transcript Type= protein_coding
chr6	75237787	75243787	75237787	75243787	-	ENST00000459637.2@COX7A2	ENST00000459637.2	protein_coding	75243717,75241123,75240301,75237787	75243787,75241265,75240385,75237988	Gene ID= ENSG00000112695.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr6	75252924	75284968	75252924	75284968	-	ENST00000230461.10@TMEM30A	ENST00000230461.10	protein_coding	75284402,75267641,75265231,75260824,75259347,75258780,75252924	75284968,75267748,75265338,75260911,75259490,75258986,75256295	Gene ID= ENSG00000112697.15 TPM= 14.48 Transcript Type= protein_coding
chr6	75313561	75493823	75313561	75493823	-	transcript2788.chr6.nic@FILIP1	transcript2788.chr6.nic	protein_coding	75493414,75414697,75362744,75353539,75313561	75493823,75414978,75362917,75353717,75315202	Gene ID= ENSG00000118407.14 TPM= 1.93 Transcript Type= NA
chr6	75294864	75313981	75294864	75313981	-	transcript2793.chr6.nnic@FILIP1	transcript2793.chr6.nnic	protein_coding	75312397,75294864	75313981,75295950	Gene ID= ENSG00000118407.14 TPM= 14 Transcript Type= NA
chr6	75308088	75334790	75308088	75334790	-	ENST00000498523.1@FILIP1	ENST00000498523.1	protein_coding	75334643,75312397,75308088	75334790,75315202,75308897	Gene ID= ENSG00000118407.14 TPM= 8.21 Transcript Type= processed_transcript
chr6	75292618	75294948	75292618	75294948	-	transcript2796.chr6.nnic@NA	transcript2796.chr6.nnic	NA	75292618	75294948	Gene ID= novel_gene_chr6_2797 TPM= 2.9 Transcript Type= NA
chr6	75311153	75313397	75311153	75313397	-	transcript2798.chr6.nnic@NA	transcript2798.chr6.nnic	NA	75311153	75313397	Gene ID= novel_gene_chr6_2799 TPM= 1.93 Transcript Type= NA
chr6	75601669	75716069	75601669	75716069	+	transcript2806.chr6.nic@SENP6	transcript2806.chr6.nic	protein_coding	75601669,75621532,75623900,75633581,75634707,75640687,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75713675,75715385	75602576,75621625,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75713825,75716069	Gene ID= ENSG00000112701.17 TPM= 3.06 Transcript Type= NA
chr6	75601669	75715904	75601669	75715904	+	transcript2808.chr6.nnic@SENP6	transcript2808.chr6.nnic	protein_coding	75601669,75621532,75623900,75633581,75634707,75640684,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75715385	75602576,75621625,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75715904	Gene ID= ENSG00000112701.17 TPM= 3.3 Transcript Type= NA
chr6	75601669	75715904	75601669	75715904	+	transcript2809.chr6.nic@SENP6	transcript2809.chr6.nic	protein_coding	75601669,75621532,75623900,75633581,75634707,75640687,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75709527,75711328,75713513,75713675,75715385	75602576,75621625,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75709630,75711416,75713581,75713825,75715904	Gene ID= ENSG00000112701.17 TPM= 2.34 Transcript Type= NA
chr6	75601509	75715904	75601509	75715904	+	ENST00000370010.6@SENP6	ENST00000370010.6	protein_coding	75601509,75621532,75623900,75633581,75634707,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75713675,75715385	75602576,75621625,75623960,75633726,75634811,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75713825,75715904	Gene ID= ENSG00000112701.17 TPM= 4.03 Transcript Type= protein_coding
chr6	75601669	75678975	75601669	75678975	+	transcript2826.chr6.nic@SENP6	transcript2826.chr6.nic	protein_coding	75601669,75621532,75623900,75633581,75634707,75640687,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811	75602576,75621625,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678975	Gene ID= ENSG00000112701.17 TPM= 3.3 Transcript Type= NA
chr6	75601868	75679867	75601868	75679867	+	transcript2829.chr6.nnic@SENP6	transcript2829.chr6.nnic	protein_coding	75601868,75621532,75623900,75633581,75640687,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811	75602576,75621625,75623960,75633726,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75679867	Gene ID= ENSG00000112701.17 TPM= 2.17 Transcript Type= NA
chr6	75749209	75890183	75749209	75890183	+	transcript2837.chr6.nic@MYO6	transcript2837.chr6.nic	protein_coding	75749209,75817501,75822782,75828540,75830416,75832842,75835901,75840585,75841214,75844897,75848351,75855139,75857097,75858902,75861023,75862596,75866526,75866932,75870647,75873207,75879820,75880043,75881689,75886004,75886844,75890057	75749423,75817664,75822851,75828613,75830545,75832947,75835956,75840682,75841378,75844977,75848531,75855283,75857254,75858993,75861095,75862723,75866621,75867105,75870685,75873300,75879950,75880120,75881818,75886094,75886994,75890183	Gene ID= ENSG00000196586.13 TPM= 4.83 Transcript Type= NA
chr6	78982965	79078554	78982965	79078554	-	transcript2845.chr6.nnic@PHIP	transcript2845.chr6.nnic	protein_coding	79078029,79077855,79077700,79077448,79063821,79060668,79060478,79042843,79025943,79025519,79019089,79017483,79017346,79016544,79015630,79015082,79004373,79003730,79001899,78998254,78997414,78990868,78988209,78985352,78982965	79078554,79077913,79077729,79077507,79063910,79060818,79060576,79043003,79026164,79025619,79019159,79017583,79017386,79016642,79015783,79015216,79004436,79003858,79002124,78998391,78997597,78990985,78988349,78985428,78983117	Gene ID= ENSG00000146247.13 TPM= 1.93 Transcript Type= NA
chr6	78982965	79078554	78982965	79078554	-	transcript2846.chr6.nnic@PHIP	transcript2846.chr6.nnic	protein_coding	79078029,79077855,79077700,79077448,79060668,79060478,79042843,79025943,79025519,79019089,79017483,79017346,79016544,79015630,79015082,79004373,79003730,79001899,78998254,78997414,78990868,78988209,78985352,78982965	79078554,79077913,79077729,79077507,79060818,79060576,79043003,79026164,79025619,79019159,79017583,79017386,79016642,79015783,79015216,79004436,79003858,79002124,78998391,78997597,78990985,78988349,78985428,78983117	Gene ID= ENSG00000146247.13 TPM= 10.62 Transcript Type= NA
chr6	78982965	79078292	78982965	79078292	-	transcript2849.chr6.nic@PHIP	transcript2849.chr6.nic	protein_coding	79078029,79077855,79077700,79077448,79060668,79060478,79042843,79025943,79025519,79019089,79017483,79017346,79016544,79015630,79015082,79003730,79001899,78998254,78997414,78990868,78988209,78985352,78982965	79078292,79077913,79077729,79077507,79060818,79060576,79043003,79026164,79025619,79019159,79017583,79017386,79016642,79015783,79015216,79003858,79002124,78998391,78997597,78990985,78988349,78985428,78983117	Gene ID= ENSG00000146247.13 TPM= 31.86 Transcript Type= NA
chr6	78982965	79078269	78982965	79078269	-	transcript2850.chr6.nic@PHIP	transcript2850.chr6.nic	protein_coding	79078029,79077855,79077700,79077448,79060668,79060478,79042843,79025943,79025519,79019089,79017483,79016544,79015630,79015082,79003730,79001899,78998254,78997414,78990868,78988209,78985352,78982965	79078269,79077913,79077729,79077507,79060818,79060576,79043003,79026164,79025619,79019159,79017583,79017386,79015783,79015216,79003858,79002124,78998391,78997597,78990985,78988349,78985428,78983117	Gene ID= ENSG00000146247.13 TPM= 1.93 Transcript Type= NA
chr6	78935867	79078236	78935867	79078236	-	ENST00000275034.4@PHIP	ENST00000275034.4	protein_coding	79078029,79077855,79077700,79077448,79060668,79060478,79042843,79025943,79025519,79019089,79017483,79017346,79016544,79015630,79015082,79003730,79001899,78998254,78997414,78990868,78988209,78985352,78982886,78978592,78970781,78970049,78969835,78965945,78965703,78963097,78961690,78958475,78955613,78955232,78954814,78947623,78946711,78946001,78945300,78935867	79078236,79077913,79077729,79077507,79060818,79060576,79043003,79026164,79025619,79019159,79017583,79017386,79016642,79015783,79015216,79003858,79002124,78998391,78997597,78990985,78988349,78985428,78983117,78978711,78970888,78970173,78969917,78966056,78965764,78963252,78961810,78958600,78955682,78955282,78954963,78947775,78946874,78946260,78945497,78941330	Gene ID= ENSG00000146247.13 TPM= 2.9 Transcript Type= protein_coding
chr6	79201249	79234738	79201249	79234738	-	ENST00000620514.1@HMGN3	ENST00000620514.1	protein_coding	79234546,79214972,79208547,79203580,79202276,79202063,79201249	79234738,79215022,79208576,79203630,79202389,79202155,79201726	Gene ID= ENSG00000118418.14 TPM= 4.83 Transcript Type= protein_coding
chr6	79201245	79234712	79201245	79234712	-	transcript2862.chr6.nic@HMGN3	transcript2862.chr6.nic	protein_coding	79234546,79214972,79208547,79203580,79202276,79201245	79234712,79215022,79208576,79203630,79202389,79202155	Gene ID= ENSG00000118418.14 TPM= 2.9 Transcript Type= NA
chr6	79201248	79234712	79201248	79234712	-	transcript2865.chr6.nic@HMGN3	transcript2865.chr6.nic	protein_coding	79234546,79214972,79208547,79203580,79201248	79234712,79215022,79208576,79203630,79202389	Gene ID= ENSG00000118418.14 TPM= 2.9 Transcript Type= NA
chr6	79201248	79234712	79201248	79234712	-	transcript2866.chr6.nnic@HMGN3	transcript2866.chr6.nnic	protein_coding	79234546,79214972,79208547,79203580,79201248	79234712,79215022,79208576,79203630,79202878	Gene ID= ENSG00000118418.14 TPM= 1.93 Transcript Type= NA
chr6	79201245	79234712	79201245	79234712	-	transcript2868.chr6.nic@HMGN3	transcript2868.chr6.nic	protein_coding	79234546,79214972,79208547,79201245	79234712,79215022,79208576,79203630	Gene ID= ENSG00000118418.14 TPM= 2.9 Transcript Type= NA
chr6	79201245	79234689	79201245	79234689	-	ENST00000344726.9@HMGN3	ENST00000344726.9	protein_coding	79234546,79214972,79208547,79203580,79202276,79201245	79234689,79215022,79208576,79203630,79202389,79201726	Gene ID= ENSG00000118418.14 TPM= 1.93 Transcript Type= protein_coding
chr6	79201245	79234689	79201245	79234689	-	ENST00000275036.11@HMGN3	ENST00000275036.11	protein_coding	79234546,79214972,79208547,79203580,79202317,79201245	79234689,79215022,79208576,79203630,79202389,79201726	Gene ID= ENSG00000118418.14 TPM= 2.9 Transcript Type= protein_coding
chr6	79233699	79236076	79233699	79236076	+	transcript2870.chr6.nnic@NA	transcript2870.chr6.nnic	NA	79233699	79236076	Gene ID= novel_gene_chr6_2871 TPM= 4.83 Transcript Type= NA
chr6	79631283	79703659	79631283	79703659	+	ENST00000369838.5@SH3BGRL2	ENST00000369838.5	protein_coding	79631283,79673614,79696485,79699498	79631506,79673799,79696565,79703659	Gene ID= ENSG00000198478.7 TPM= 5.79 Transcript Type= protein_coding
chr6	80106647	80346254	80106647	80346254	+	ENST00000356489.9@BCKDHB	ENST00000356489.9	protein_coding	80106647,80127547,80129161,80167678,80168875,80171282,80200934,80203102,80273135,80343664,80345975	80106889,80127624,80129229,80167811,80169030,80171390,80201031,80203212,80273221,80343812,80346254	Gene ID= ENSG00000083123.14 TPM= 2.9 Transcript Type= protein_coding
chr6	82200586	82247785	82200586	82247785	-	transcript2886.chr6.nic@IBTK	transcript2886.chr6.nic	protein_coding	82247562,82240166,82234159,82231718,82227192,82225477,82224068,82223440,82220590,82217960,82216076,82214227,82212707,82211490,82211367,82210814,82204857,82202528,82201422,82200586	82247785,82240843,82234255,82231842,82227302,82225647,82224185,82223620,82220713,82218137,82216250,82214829,82212793,82211572,82211404,82210910,82204958,82202645,82201482,82200708	Gene ID= ENSG00000005700.14 TPM= 3.86 Transcript Type= NA
chr6	82214310	82247785	82214310	82247785	-	transcript2890.chr6.nnic@IBTK	transcript2890.chr6.nnic	protein_coding	82247562,82240166,82234159,82231718,82227192,82225477,82224068,82223440,82220590,82217960,82214310	82247785,82240843,82234255,82231842,82227302,82225647,82224185,82223620,82220713,82218137,82214829	Gene ID= ENSG00000005700.14 TPM= 5.79 Transcript Type= NA
chr6	82363206	82367417	82363206	82367417	+	ENST00000535040.4@TPBG	ENST00000535040.4	protein_coding	82363206,82363646,82364623	82363539,82363908,82367417	Gene ID= ENSG00000146242.8 TPM= 3.86 Transcript Type= protein_coding
chr6	83067666	83168719	83067666	83168719	+	ENST00000349129.6@DOPEY1	ENST00000349129.6	protein_coding	83067666,83096731,83096925,83100705,83108910,83110125,83113323,83118888,83119748,83120683,83121930,83122863,83124705,83125166,83125500,83128887,83130123,83132176,83134187,83135619,83137173,83140000,83140221,83141921,83145524,83147236,83148759,83151593,83151883,83152288,83153511,83153894,83154180,83155951,83157182,83158567,83159796,83162790,83167862	83067779,83096823,83097115,83100886,83109080,83110314,83113421,83118987,83119857,83120791,83122050,83122982,83124819,83125195,83125733,83129508,83130397,83132328,83134287,83135878,83139162,83140111,83140403,83142046,83145658,83147291,83148863,83151659,83152027,83152367,83153620,83154043,83154241,83156103,83157318,83158622,83159960,83162919,83168719	Gene ID= ENSG00000083097.14 TPM= 5.79 Transcript Type= protein_coding
chr6	83164873	83193293	83164873	83193293	-	ENST00000513973.5@PGM3	ENST00000513973.5	protein_coding	83193179,83190809,83188614,83187008,83182845,83181736,83179810,83178673,83175962,83174374,83171937,83170305,83164873	83193293,83191014,83188798,83187075,83182978,83181931,83179967,83178756,83176060,83174487,83172059,83170478,83169323	Gene ID= ENSG00000013375.15 TPM= 1.93 Transcript Type= protein_coding
chr6	83169521	83193262	83169521	83193262	-	transcript2906.chr6.nic@PGM3	transcript2906.chr6.nic	protein_coding	83193179,83190809,83188614,83187008,83182845,83181736,83179810,83178673,83175962,83174374,83171937,83170305,83169521	83193262,83191014,83188798,83187075,83182978,83181931,83179967,83178756,83176060,83174487,83172059,83170478,83169841	Gene ID= ENSG00000013375.15 TPM= 1.93 Transcript Type= NA
chr6	83193354	83196537	83193354	83196537	+	transcript2911.chr6.nic@RWDD2A	transcript2911.chr6.nic	protein_coding	83193354,83195595	83194652,83196537	Gene ID= ENSG00000013392.7 TPM= 2.9 Transcript Type= NA
chr6	83211527	83431091	83211527	83431091	-	transcript2912.chr6.nnic@ME1	transcript2912.chr6.nnic	protein_coding	83430877,83407768,83398367,83352064,83346173,83315310,83279489,83276116,83253629,83239539,83237717,83228826,83227335,83223760,83216498,83211527	83431091,83407901,83398516,83352139,83346334,83315413,83279586,83276153,83253738,83239636,83237830,83228931,83227477,83223933,83216596,83212094	Gene ID= ENSG00000065833.8 TPM= 2.9 Transcript Type= NA
chr6	83210389	83431071	83210389	83431071	-	ENST00000369705.3@ME1	ENST00000369705.3	protein_coding	83430877,83407768,83398367,83352064,83346173,83315310,83253629,83239539,83237717,83228826,83227335,83223760,83216498,83210389	83431071,83407901,83398516,83352139,83346334,83315413,83253738,83239636,83237830,83228931,83227477,83223933,83216596,83212094	Gene ID= ENSG00000065833.8 TPM= 33.79 Transcript Type= protein_coding
chr6	83859643	83967424	83859643	83967424	+	ENST00000369681.9@CYB5R4	ENST00000369681.9	protein_coding	83859643,83864175,83893522,83909009,83914416,83918005,83919397,83921082,83922438,83924470,83934595,83936224,83940056,83940515,83955298,83959824	83859857,83864328,83893622,83909090,83914448,83918065,83919454,83921175,83922470,83924592,83934735,83936376,83940206,83940601,83955462,83967424	Gene ID= ENSG00000065615.13 TPM= 2.9 Transcript Type= protein_coding
chr6	84174803	84227684	84174803	84227684	-	transcript2934.chr6.nic@CEP162	transcript2934.chr6.nic	protein_coding	84227580,84226337,84221057,84215776,84215282,84212957,84203981,84201737,84200789,84194884,84193609,84186332,84185187,84175214,84174803	84227684,84226452,84221171,84215922,84215465,84213024,84204096,84201767,84200905,84195075,84193690,84186623,84185448,84175347,84174954	Gene ID= ENSG00000135315.11 TPM= 1.93 Transcript Type= NA
chr6	85505798	85594156	85505798	85594156	-	ENST00000505648.5@SNX14	ENST00000505648.5	protein_coding	85593834,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85538838,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505798	85594156,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85538864,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005	Gene ID= ENSG00000135317.12 TPM= 2.9 Transcript Type= protein_coding
chr6	85505499	85593895	85505499	85593895	-	ENST00000314673.7@SNX14	ENST00000314673.7	protein_coding	85593579,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85538838,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505499	85593895,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85538864,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005	Gene ID= ENSG00000135317.12 TPM= 8.69 Transcript Type= protein_coding
chr6	85611324	85643869	85611324	85643869	-	transcript2953.chr6.nic@SYNCRIP	transcript2953.chr6.nic	protein_coding	85643750,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614981,85611324	85643869,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347,85612923	Gene ID= ENSG00000135316.17 TPM= 5.79 Transcript Type= NA
chr6	85614216	85643869	85614216	85643869	-	transcript2967.chr6.nic@SYNCRIP	transcript2967.chr6.nic	protein_coding	85643750,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614216	85643869,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347	Gene ID= ENSG00000135316.17 TPM= 6.76 Transcript Type= NA
chr6	85677084	85678733	85677084	85678733	-	ENST00000414002.5@SNHG5	ENST00000414002.5	processed_transcript	85678694,85678136,85677954,85677795,85677424,85677084	85678733,85678188,85678032,85677875,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 83.98 Transcript Type= lincRNA
chr6	85676990	85678736	85676990	85678736	-	ENST00000369605.8@SNHG5	ENST00000369605.8	processed_transcript	85678136,85677954,85677795,85677424,85676990	85678736,85678032,85677875,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 34.75 Transcript Type= lincRNA
chr6	85677084	85678736	85677084	85678736	-	transcript2980.chr6.nic@SNHG5	transcript2980.chr6.nic	processed_transcript	85678694,85678136,85677954,85677424,85677084	85678736,85678188,85678032,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 33.79 Transcript Type= NA
chr6	85677084	85678736	85677084	85678736	-	transcript2983.chr6.nic@SNHG5	transcript2983.chr6.nic	processed_transcript	85678694,85678136,85677424,85677084	85678736,85678188,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 6.76 Transcript Type= NA
chr6	87154100	87155482	87154100	87155482	-	transcript2986.chr6.nnic@NA	transcript2986.chr6.nnic	NA	87154100	87155482	Gene ID= novel_gene_chr6_2987 TPM= 2.9 Transcript Type= NA
chr6	87155549	87264196	87155549	87264196	+	ENST00000369577.7@ZNF292	ENST00000369577.7	protein_coding	87155549,87215903,87216299,87218596,87233325,87243475,87245503,87254650	87155759,87216057,87216377,87218731,87233527,87243611,87245644,87264196	Gene ID= ENSG00000188994.12 TPM= 3.86 Transcript Type= protein_coding
chr6	87322593	87342322	87322593	87342322	+	ENST00000229570.9@SMIM8	ENST00000229570.9	protein_coding	87322593,87337009,87340116	87322632,87337166,87342322	Gene ID= ENSG00000111850.10 TPM= 1.93 Transcript Type= protein_coding
chr6	87472942	87512336	87472942	87512336	+	transcript3001.chr6.nnic@SLC35A1	transcript3001.chr6.nnic	protein_coding	87472942,87477362,87499094,87500508,87501158,87506382,87508420,87509041,87511399	87473019,87477539,87499166,87500667,87501310,87506448,87508596,87509175,87512336	Gene ID= ENSG00000164414.17 TPM= 1.93 Transcript Type= NA
chr6	87472977	87512336	87472977	87512336	+	transcript3008.chr6.nnic@SLC35A1	transcript3008.chr6.nnic	protein_coding	87472977,87500508,87501158,87506382,87508420,87509041,87511399	87473019,87500667,87501310,87506448,87508596,87509175,87512336	Gene ID= ENSG00000164414.17 TPM= 2.9 Transcript Type= NA
chr6	87472977	87512336	87472977	87512336	+	ENST00000369552.8@SLC35A1	ENST00000369552.8	protein_coding	87472977,87477362,87500508,87501158,87506382,87508420,87509041,87511399	87473019,87477539,87500667,87501310,87506448,87508596,87509175,87512336	Gene ID= ENSG00000164414.17 TPM= 5.79 Transcript Type= protein_coding
chr6	87513938	87590015	87513938	87590015	-	transcript3019.chr6.nnic@RARS2	transcript3019.chr6.nnic	protein_coding	87589922,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87534735,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87513938	87590015,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87534858,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 1.93 Transcript Type= NA
chr6	87514378	87589990	87514378	87589990	-	transcript3020.chr6.nnic@RARS2	transcript3020.chr6.nnic	protein_coding	87589701,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87534735,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87589990,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87534858,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 3.38 Transcript Type= NA
chr6	87514378	87590015	87514378	87590015	-	transcript3022.chr6.nic@RARS2	transcript3022.chr6.nic	protein_coding	87589922,87569517,87564544,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87590015,87569590,87564662,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 1.93 Transcript Type= NA
chr6	87514378	87589990	87514378	87589990	-	transcript3024.chr6.nnic@RARS2	transcript3024.chr6.nnic	protein_coding	87589922,87585046,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87589990,87585263,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 1.93 Transcript Type= NA
chr6	87513938	87589990	87513938	87589990	-	transcript3026.chr6.nnic@RARS2	transcript3026.chr6.nnic	protein_coding	87589701,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87513938	87589990,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 2.9 Transcript Type= NA
chr6	87514378	87589990	87514378	87589990	-	transcript3037.chr6.nnic@RARS2	transcript3037.chr6.nnic	protein_coding	87589701,87569517,87564130,87562702,87555408,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87589990,87569590,87564232,87562785,87555505,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 1.93 Transcript Type= NA
chr6	87514378	87589990	87514378	87589990	-	transcript3038.chr6.nnic@RARS2	transcript3038.chr6.nnic	protein_coding	87589701,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87589990,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 1.93 Transcript Type= NA
chr6	87514378	87590003	87514378	87590003	-	ENST00000369536.9@RARS2	ENST00000369536.9	protein_coding	87589922,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87590003,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 32.82 Transcript Type= protein_coding
chr6	87590110	87667451	87590110	87667451	+	transcript3046.chr6.nnic@ORC3	transcript3046.chr6.nnic	protein_coding	87590110,87594353,87594542,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656906,87657921,87663003,87664743,87665754,87667018	87590192,87594407,87594613,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667451	Gene ID= ENSG00000135336.14 TPM= 3.76 Transcript Type= NA
chr6	87590110	87667451	87590110	87667451	+	transcript3052.chr6.nnic@ORC3	transcript3052.chr6.nnic	protein_coding	87590110,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87621354,87621950,87634845,87636407,87653116,87656903,87657921,87663003,87664743,87665754,87667018	87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667451	Gene ID= ENSG00000135336.14 TPM= 5.21 Transcript Type= NA
chr6	87590110	87621423	87590110	87621423	+	transcript3055.chr6.nic@ORC3	transcript3055.chr6.nic	protein_coding	87590110,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354	87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621423	Gene ID= ENSG00000135336.14 TPM= 1.93 Transcript Type= NA
chr6	87590121	87667451	87590121	87667451	+	ENST00000392844.7@ORC3	ENST00000392844.7	protein_coding	87590121,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656906,87657921,87663003,87664743,87665754,87667018	87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667451	Gene ID= ENSG00000135336.14 TPM= 32.72 Transcript Type= protein_coding
chr6	87590135	87667451	87590135	87667451	+	ENST00000257789.4@ORC3	ENST00000257789.4	protein_coding	87590135,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656903,87657921,87663003,87664743,87665754,87667018	87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667451	Gene ID= ENSG00000135336.14 TPM= 12.94 Transcript Type= protein_coding
chr6	87698407	87702271	87698407	87702271	-	transcript3065.chr6.nnic@NA	transcript3065.chr6.nnic	NA	87698407	87702271	Gene ID= novel_gene_chr6_3066 TPM= 19.31 Transcript Type= NA
chr6	88610272	88963721	88610272	88963721	-	ENST00000369485.8@RNGTT	ENST00000369485.8	protein_coding	88963346,88941071,88929164,88928985,88906365,88904715,88891806,88890495,88853629,88849755,88844357,88801564,88769774,88678353,88614272,88610272	88963721,88941180,88929267,88929073,88906440,88904955,88891915,88890596,88853764,88849826,88844521,88801632,88769874,88678419,88614395,88612882	Gene ID= ENSG00000111880.15 TPM= 7.72 Transcript Type= protein_coding
chr6	89080751	89084838	89080751	89084838	+	transcript3079.chr6.nnic@PNRC1	transcript3079.chr6.nnic	protein_coding	89080751,89081046,89083753	89080976,89081434,89084838	Gene ID= ENSG00000146278.10 TPM= 66.12 Transcript Type= NA
chr6	89080778	89085160	89080778	89085160	+	ENST00000336032.3@PNRC1	ENST00000336032.3	protein_coding	89080778,89083753	89081434,89085160	Gene ID= ENSG00000146278.10 TPM= 32.98 Transcript Type= protein_coding
chr6	89130820	89146508	89130820	89146508	-	transcript3108.chr6.nnic@NA	transcript3108.chr6.nnic	NA	89145693,89143747,89132336,89130820	89146508,89143833,89132478,89131982	Gene ID= novel_gene_chr6_3109 TPM= 3.86 Transcript Type= NA
chr6	89146050	89165565	89146050	89165565	+	ENST00000275072.4@PM20D2	ENST00000275072.4	protein_coding	89146050,89149265,89153043,89154748,89158325,89161783,89162109	89146609,89149413,89153185,89154902,89158460,89161890,89165565	Gene ID= ENSG00000146281.5 TPM= 6.76 Transcript Type= protein_coding
chr6	89326625	89352848	89326625	89352848	-	ENST00000435041.2@UBE2J1	ENST00000435041.2	protein_coding	89352539,89343683,89342324,89338459,89338205,89335302,89333086,89326625	89352848,89343756,89342455,89338543,89338310,89335431,89333205,89329957	Gene ID= ENSG00000198833.6 TPM= 6.76 Transcript Type= protein_coding
chr6	89367870	89412271	89367870	89412271	-	transcript3124.chr6.nnic@RRAGD	transcript3124.chr6.nnic	protein_coding	89412171,89411846,89387295,89380168,89379224,89377671,89372437,89367870	89412271,89412107,89387590,89380367,89379338,89377813,89372585,89368207	Gene ID= ENSG00000025039.14 TPM= 8.69 Transcript Type= NA
chr6	89364636	89412270	89364636	89412270	-	ENST00000369415.8@RRAGD	ENST00000369415.8	protein_coding	89411846,89387295,89380168,89379224,89377671,89372437,89364636	89412270,89387590,89380367,89379338,89377813,89372585,89368207	Gene ID= ENSG00000025039.14 TPM= 21.24 Transcript Type= protein_coding
chr6	89632224	89638753	89632224	89638753	-	ENST00000523377.1@LYRM2	ENST00000523377.1	protein_coding	89638672,89637742,89632224	89638753,89637882,89637353	Gene ID= ENSG00000083099.10 TPM= 4.83 Transcript Type= protein_coding
chr6	89829900	89862793	89829900	89862793	+	ENST00000419040.6@CASP8AP2	ENST00000419040.6	protein_coding	89829900,89846562,89853166,89854817,89855470,89857084,89862126	89830067,89846644,89853234,89854917,89855544,89857199,89862793	Gene ID= ENSG00000118412.12 TPM= 1.93 Transcript Type= protein_coding
chr6	89829939	89874436	89829939	89874436	+	ENST00000237177.10@CASP8AP2	ENST00000237177.10	protein_coding	89829939,89846562,89853166,89854817,89855470,89857084,89862126,89865953,89871289,89873806	89830106,89846644,89853234,89854917,89855544,89857199,89864371,89869082,89871388,89874436	Gene ID= ENSG00000118412.12 TPM= 1.93 Transcript Type= processed_transcript
chr6	90515634	90587082	90515634	90587082	-	transcript3187.chr6.nnic@MAP3K7	transcript3187.chr6.nnic	protein_coding	90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90536337,90523678,90519258,90518447,90515634	90587082,90571807,90568623,90561667,90560234,90556624,90553586,90552179,90550549,90548177,90547387,90536401,90523783,90519319,90518562,90516681	Gene ID= ENSG00000135341.17 TPM= 3.86 Transcript Type= NA
chr6	90513573	90587045	90513573	90587045	-	ENST00000369332.7@MAP3K7	ENST00000369332.7	protein_coding	90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90536337,90523678,90519258,90518447,90513573	90587045,90571807,90568623,90561667,90560214,90556624,90553586,90552179,90550549,90548177,90547387,90536401,90523783,90519319,90518562,90516681	Gene ID= ENSG00000135341.17 TPM= 7.72 Transcript Type= protein_coding
chr6	95577543	95609457	95577543	95609457	+	ENST00000358812.8@MANEA	ENST00000358812.8	protein_coding	95577543,95586402,95596737,95604827,95605748	95577638,95586983,95596846,95604903,95609457	Gene ID= ENSG00000172469.15 TPM= 5.79 Transcript Type= protein_coding
chr6	96521841	96549799	96521841	96549799	+	transcript3209.chr6.nic@UFL1	transcript3209.chr6.nic	protein_coding	96521841,96523146,96524382,96525297,96526321,96528502,96534263,96536244,96537374,96538631,96540535,96542894,96548164,96549412,96549669	96521950,96523291,96524410,96525394,96526435,96528632,96534321,96536390,96537549,96538810,96540655,96543016,96548281,96549578,96549799	Gene ID= ENSG00000014123.9 TPM= 1.93 Transcript Type= NA
chr6	96521827	96540837	96521827	96540837	+	transcript3213.chr6.nic@UFL1	transcript3213.chr6.nic	protein_coding	96521827,96523146,96524382,96525297,96526321,96528502,96534263,96536244,96537374,96538631,96540535	96521950,96523291,96524410,96525394,96526435,96528632,96534321,96536390,96537549,96538810,96540837	Gene ID= ENSG00000014123.9 TPM= 2.9 Transcript Type= NA
chr6	96521808	96555276	96521808	96555276	+	ENST00000369278.4@UFL1	ENST00000369278.4	protein_coding	96521808,96523146,96524382,96525297,96526321,96528502,96534263,96536244,96537374,96538631,96540535,96542894,96548164,96549412,96549669,96551433,96551838,96552482,96553285	96521950,96523291,96524410,96525394,96526435,96528632,96534321,96536390,96537549,96538810,96540655,96543016,96548281,96549578,96549799,96551513,96551923,96552662,96555276	Gene ID= ENSG00000014123.9 TPM= 13.51 Transcript Type= protein_coding
chr6	96562584	96616568	96562584	96616568	+	ENST00000326771.2@FHL5	ENST00000326771.2	protein_coding	96562584,96563125,96603602,96604750,96605902,96610572,96615609	96562720,96563355,96603772,96604924,96606071,96610758,96616568	Gene ID= ENSG00000112214.10 TPM= 1.93 Transcript Type= protein_coding
chr6	96563127	96616636	96563127	96616636	+	transcript3221.chr6.nic@FHL5	transcript3221.chr6.nic	protein_coding	96563127,96603602,96604750,96605902,96610572,96615609	96563355,96603772,96604924,96606071,96610758,96616636	Gene ID= ENSG00000112214.10 TPM= 1.93 Transcript Type= NA
chr6	96889313	96897881	96889313	96897881	-	ENST00000316149.7@NDUFAF4	ENST00000316149.7	protein_coding	96897666,96896744,96889313	96897881,96896847,96891391	Gene ID= ENSG00000123545.5 TPM= 15.44 Transcript Type= protein_coding
chr6	98873725	98948006	98873725	98948006	-	ENST00000229971.2@FBXL4	ENST00000229971.2	protein_coding	98947806,98927705,98926477,98917374,98905426,98899268,98880553,98875415,98873725	98948006,98927822,98927060,98917719,98905670,98899481,98880624,98875727,98874441	Gene ID= ENSG00000112234.8 TPM= 4.83 Transcript Type= protein_coding
chr6	98873924	98947996	98873924	98947996	-	transcript3235.chr6.nic@FBXL4	transcript3235.chr6.nic	protein_coding	98947806,98927705,98926477,98917374,98905426,98899268,98880553,98873924	98947996,98927822,98927060,98917719,98905670,98899481,98880624,98875727	Gene ID= ENSG00000112234.8 TPM= 2.9 Transcript Type= NA
chr6	98896722	98947996	98896722	98947996	-	transcript3238.chr6.nic@FBXL4	transcript3238.chr6.nic	protein_coding	98947806,98927705,98926477,98917374,98905426,98896722	98947996,98927822,98927060,98917719,98905670,98899481	Gene ID= ENSG00000112234.8 TPM= 1.93 Transcript Type= NA
chr6	99369474	99394211	99369474	99394211	-	transcript3239.chr6.nic@COQ3	transcript3239.chr6.nic	protein_coding	99394074,99383698,99383008,99380189,99377386,99375940,99371428,99369474	99394211,99383824,99383130,99380341,99377485,99376182,99371587,99369820	Gene ID= ENSG00000132423.11 TPM= 1.93 Transcript Type= NA
chr6	99369400	99394204	99369400	99394204	-	ENST00000254759.7@COQ3	ENST00000254759.7	protein_coding	99394074,99383698,99380189,99377386,99375940,99371428,99369400	99394204,99383824,99380341,99377485,99376182,99371587,99369820	Gene ID= ENSG00000132423.11 TPM= 1.93 Transcript Type= protein_coding
chr6	99399964	99425331	99399964	99425331	-	ENST00000438806.5@PNISR	ENST00000438806.5	protein_coding	99425215,99414572,99412551,99410741,99409173,99408081,99406031,99404603,99403829,99402540,99399964	99425331,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99403882,99402710,99401630	Gene ID= ENSG00000132424.14 TPM= 1.93 Transcript Type= protein_coding
chr6	99401462	99425335	99401462	99425335	-	transcript3250.chr6.nic@PNISR	transcript3250.chr6.nic	protein_coding	99425215,99416349,99414572,99412551,99410741,99409173,99408081,99406031,99402540,99401462	99425335,99416428,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99401630	Gene ID= ENSG00000132424.14 TPM= 2.9 Transcript Type= NA
chr6	99542380	99568973	99542380	99568973	-	ENST00000520429.5@CCNC	ENST00000520429.5	protein_coding	99568496,99562842,99561597,99561367,99558497,99551840,99550993,99550218,99549508,99546395,99545112,99542380	99568973,99562948,99561681,99561436,99558548,99551895,99551028,99550309,99549575,99546474,99545230,99543609	Gene ID= ENSG00000112237.12 TPM= 32.82 Transcript Type= protein_coding
chr6	99543780	99568662	99543780	99568662	-	ENST00000518714.5@CCNC	ENST00000518714.5	protein_coding	99568496,99562842,99561597,99561367,99558497,99551840,99550993,99550218,99549508,99546395,99545112,99543780	99568662,99562948,99561681,99561436,99558548,99551895,99551028,99550309,99549575,99546474,99545230,99544273	Gene ID= ENSG00000112237.12 TPM= 9.65 Transcript Type= protein_coding
chr6	100385015	100464929	100385015	100464929	-	ENST00000369208.7@SIM1	ENST00000369208.7	protein_coding	100464614,100463294,100453762,100450267,100449591,100449363,100448479,100448146,100447268,100420790,100393487,100385015	100464929,100463935,100453844,100450356,100449699,100449448,100448678,100448252,100447415,100420958,100393889,100391091	Gene ID= ENSG00000112246.9 TPM= 2.9 Transcript Type= protein_coding
chr6	100465100	100465506	100465100	100465506	+	transcript3277.chr6.nnic@NA	transcript3277.chr6.nnic	NA	100465100	100465506	Gene ID= novel_gene_chr6_3278 TPM= 2.9 Transcript Type= NA
chr6	100856303	100881311	100856303	100881311	-	ENST00000369143.2@ASCC3	ENST00000369143.2	protein_coding	100881061,100867908,100864064,100856303	100881311,100868038,100864214,100859202	Gene ID= ENSG00000112249.13 TPM= 2.9 Transcript Type= protein_coding
chr6	100881471	100882987	100881471	100882987	+	ENST00000565695.2@AL133338.1	ENST00000565695.2	antisense_RNA	100881471	100882987	Gene ID= ENSG00000260000.2 TPM= 1.93 Transcript Type= antisense_RNA
chr6	105096822	105137174	105096822	105137174	-	ENST00000314641.9@BVES	ENST00000314641.9	protein_coding	105136969,105133352,105129379,105125391,105124547,105116701,105115686,105096822	105137174,105133588,105129503,105125578,105124655,105116868,105115827,105101213	Gene ID= ENSG00000112276.13 TPM= 22.2 Transcript Type= protein_coding
chr6	105137244	105169933	105137244	105169933	+	transcript3299.chr6.nnic@BVES-AS1	transcript3299.chr6.nnic	antisense_RNA	105137244,105137770,105147276,105154394,105168731	105137311,105137923,105147380,105154491,105169933	Gene ID= ENSG00000203808.10 TPM= 1.93 Transcript Type= NA
chr6	105136930	105169941	105136930	105169941	+	transcript3308.chr6.nnic@BVES-AS1	transcript3308.chr6.nnic	antisense_RNA	105136930,105137770,105147276,105168739	105137332,105137923,105147380,105169941	Gene ID= ENSG00000203808.10 TPM= 1.93 Transcript Type= NA
chr6	105158280	105179860	105158280	105179860	-	ENST00000254765.3@POPDC3	ENST00000254765.3	protein_coding	105179833,105161425,105159711,105158280	105179860,105162160,105159819,105158751	Gene ID= ENSG00000132429.9 TPM= 3.86 Transcript Type= protein_coding
chr6	105158360	105179995	105158360	105179995	-	ENST00000474760.1@POPDC3	ENST00000474760.1	protein_coding	105179833,105161796,105159711,105158360	105179995,105162160,105159819,105158751	Gene ID= ENSG00000132429.9 TPM= 1.93 Transcript Type= processed_transcript
chr6	105277722	105403090	105277722	105403090	-	transcript3334.chr6.nnic@PREP	transcript3334.chr6.nnic	protein_coding	105402847,105397853,105377386,105376125,105373369,105368903,105352972,105328829,105323665,105288758,105285486,105282451,105281746,105277722	105403090,105397927,105377519,105376255,105373578,105369024,105353077,105329026,105323768,105288894,105285580,105282582,105281902,105278438	Gene ID= ENSG00000085377.13 TPM= 2.9 Transcript Type= NA
chr6	105322255	105403090	105322255	105403090	-	transcript3337.chr6.nic@PREP	transcript3337.chr6.nic	protein_coding	105402847,105397853,105377386,105376125,105373369,105368903,105352972,105333314,105328829,105323665,105322255	105403090,105397927,105377519,105376255,105373578,105369024,105353077,105333505,105329026,105323768,105323111	Gene ID= ENSG00000085377.13 TPM= 14.48 Transcript Type= NA
chr6	105277565	105403084	105277565	105403084	-	ENST00000369110.7@PREP	ENST00000369110.7	protein_coding	105402847,105397853,105377386,105376125,105373369,105368903,105352972,105333314,105328829,105323665,105288758,105285486,105282451,105281746,105277565	105403084,105397927,105377519,105376255,105373578,105369024,105353077,105333505,105329026,105323768,105288894,105285580,105282582,105281902,105278438	Gene ID= ENSG00000085377.13 TPM= 6.76 Transcript Type= protein_coding
chr6	105279016	105281755	105279016	105281755	+	ENST00000452363.1@AL133406.2	ENST00000452363.1	antisense_RNA	105279016,105280621	105279078,105281755	Gene ID= ENSG00000231628.1 TPM= 1.93 Transcript Type= antisense_RNA
chr6	105279018	105281757	105279018	105281757	+	transcript3345.chr6.nnic@NA	transcript3345.chr6.nnic	NA	105279018	105281757	Gene ID= novel_gene_chr6_3346 TPM= 1.93 Transcript Type= NA
chr6	106184476	106325791	106184476	106325791	-	ENST00000369076.7@ATG5	ENST00000369076.7	protein_coding	106325526,106316101,106308364,106293028,106279661,106248150,106201972,106184476	106325791,106316266,106308491,106293106,106279823,106248244,106202089,106186676	Gene ID= ENSG00000057663.14 TPM= 6.76 Transcript Type= protein_coding
chr6	106571971	106629487	106571971	106629487	-	ENST00000369063.7@RTN4IP1	ENST00000369063.7	protein_coding	106628748,106622818,106621425,106619202,106602874,106592164,106587679,106583328,106571971	106629487,106622969,106621493,106619326,106602922,106592300,106587862,106583420,106572103	Gene ID= ENSG00000130347.12 TPM= 12.55 Transcript Type= protein_coding
chr6	106629566	106655742	106629566	106655742	+	transcript3367.chr6.nic@QRSL1	transcript3367.chr6.nic	protein_coding	106629566,106640349,106640823,106642994,106649025,106652209,106652467,106654730,106655615	106629705,106640508,106640921,106643090,106649201,106652384,106652582,106654922,106655742	Gene ID= ENSG00000130348.11 TPM= 2.9 Transcript Type= NA
chr6	107028213	107051342	107028213	107051342	+	transcript3369.chr6.nnic@C6orf203	transcript3369.chr6.nnic	protein_coding	107028213,107030025,107039749,107044260,107051057	107028271,107030107,107040230,107044332,107051342	Gene ID= ENSG00000130349.9 TPM= 2.9 Transcript Type= NA
chr6	107028213	107051342	107028213	107051342	+	ENST00000311381.7@C6orf203	ENST00000311381.7	protein_coding	107028213,107039749,107044260,107051057	107028271,107040230,107044332,107051342	Gene ID= ENSG00000130349.9 TPM= 9.65 Transcript Type= protein_coding
chr6	107152557	107459579	107152557	107459579	-	transcript3381.chr6.nnic@PDSS2	transcript3381.chr6.nnic	protein_coding	107458990,107334198,107274029,107245548,107212109,107193822,107152557	107459579,107334332,107274227,107245619,107212282,107193854,107154777	Gene ID= ENSG00000164494.11 TPM= 1.93 Transcript Type= NA
chr6	107152557	107459563	107152557	107459563	-	ENST00000369037.8@PDSS2	ENST00000369037.8	protein_coding	107458990,107334198,107274029,107245548,107212109,107210439,107193822,107152557	107459563,107334332,107274227,107245619,107212282,107210570,107193854,107154777	Gene ID= ENSG00000164494.11 TPM= 8.69 Transcript Type= protein_coding
chr6	107264186	107459564	107264186	107459564	-	ENST00000369031.4@PDSS2	ENST00000369031.4	protein_coding	107458990,107334198,107274029,107264186	107459564,107334332,107274227,107264512	Gene ID= ENSG00000164494.11 TPM= 1.93 Transcript Type= protein_coding
chr6	107489958	107660167	107489958	107660167	+	ENST00000317357.9@SOBP	ENST00000317357.9	protein_coding	107489958,107503657,107506242,107533459,107587080,107633514,107658207	107490712,107503795,107506427,107533610,107587175,107635469,107660167	Gene ID= ENSG00000112320.11 TPM= 22.2 Transcript Type= protein_coding
chr6	107489993	107659484	107489993	107659484	+	transcript3387.chr6.nnic@SOBP	transcript3387.chr6.nnic	protein_coding	107489993,107503657,107506242,107533459,107587080,107658207	107490712,107503795,107506427,107533610,107587175,107659484	Gene ID= ENSG00000112320.11 TPM= 14.48 Transcript Type= NA
chr6	107893570	107958210	107893570	107958210	-	transcript3407.chr6.nic@SEC63	transcript3407.chr6.nic	protein_coding	107957886,107929415,107924818,107921797,107913366,107912716,107911346,107908927,107906683,107906448,107904629,107902844,107901370,107897649,107893838,107893570	107958210,107929514,107924932,107921909,107913427,107912774,107911396,107909035,107906777,107906580,107904721,107902998,107901517,107897731,107893897,107893655	Gene ID= ENSG00000025796.13 TPM= 19.31 Transcript Type= NA
chr6	108042818	108074753	108042818	108074753	-	transcript3417.chr6.nic@OSTM1	transcript3417.chr6.nic	protein_coding	108074250,108064185,108054490,108051031,108049532,108049253,108042818	108074753,108064299,108054587,108051198,108049583,108049418,108044840	Gene ID= ENSG00000081087.14 TPM= 5.79 Transcript Type= NA
chr6	108072676	108074741	108072676	108074741	-	transcript3425.chr6.nnic@NA	transcript3425.chr6.nnic	NA	108072676	108074741	Gene ID= novel_gene_chr6_3426 TPM= 1.93 Transcript Type= NA
chr6	108211222	108261260	108211222	108261260	-	ENST00000230085.12@SNX3	ENST00000230085.12	protein_coding	108260760,108222950,108214498,108211222	108261260,108223045,108214622,108212254	Gene ID= ENSG00000112335.14 TPM= 80.12 Transcript Type= protein_coding
chr6	108294894	108526001	108294894	108526001	+	ENST00000368977.8@AFG1L	ENST00000368977.8	protein_coding	108294894,108323825,108346988,108355654,108356690,108366233,108401996,108447214,108476865,108477192,108510212,108519697,108522297	108295218,108324048,108347039,108355755,108356820,108366332,108402054,108447296,108476935,108477292,108510352,108519810,108526001	Gene ID= ENSG00000135537.16 TPM= 3.86 Transcript Type= protein_coding
chr6	108559771	108665829	108559771	108665829	+	transcript3458.chr6.nic@FOXO3	transcript3458.chr6.nic	protein_coding	108559771,108561086,108663455	108560015,108561829,108665829	Gene ID= ENSG00000118689.14 TPM= 19.79 Transcript Type= NA
chr6	108560866	108684768	108560866	108684768	+	ENST00000406360.1@FOXO3	ENST00000406360.1	protein_coding	108560866,108663455,108679827	108561829,108664889,108684768	Gene ID= ENSG00000118689.14 TPM= 47.69 Transcript Type= protein_coding
chr6	108656346	108680751	108656346	108680751	+	ENST00000540898.1@FOXO3	ENST00000540898.1	protein_coding	108656346,108663455,108679827	108656538,108664889,108680751	Gene ID= ENSG00000118689.14 TPM= 148.8 Transcript Type= protein_coding
chr6	108986442	109009555	108986442	109009555	-	ENST00000356644.7@SESN1	ENST00000356644.7	protein_coding	109009359,109002278,109001288,109000491,108998513,108994462,108992787,108990645,108988543,108986442	109009555,109002343,109001488,109000673,108998755,108994609,108992899,108990835,108988687,108987630	Gene ID= ENSG00000080546.13 TPM= 18.02 Transcript Type= protein_coding
chr6	108986437	109094819	108986437	109094819	-	ENST00000436639.6@SESN1	ENST00000436639.6	protein_coding	109093795,109002278,109001288,109000491,108998513,108994462,108992787,108990645,108988543,108986437	109094819,109002343,109001488,109000673,108998755,108994609,108992899,108990835,108988687,108987630	Gene ID= ENSG00000080546.13 TPM= 166.68 Transcript Type= protein_coding
chr6	109089061	109094473	109089061	109094473	-	transcript3496.chr6.nnic@NA	transcript3496.chr6.nnic	NA	109089061	109094473	Gene ID= novel_gene_chr6_3497 TPM= 7.72 Transcript Type= NA
chr6	109366518	109382444	109366518	109382444	-	ENST00000310786.8@CD164	ENST00000310786.8	protein_coding	109382204,109379579,109377900,109376074,109370411,109366518	109382444,109379662,109377971,109376112,109370467,109369017	Gene ID= ENSG00000135535.15 TPM= 522.55 Transcript Type= protein_coding
chr6	109366514	109382457	109366514	109382457	-	ENST00000413644.6@CD164	ENST00000413644.6	protein_coding	109382204,109379579,109377900,109376074,109370411,109368922,109366514	109382457,109379662,109377971,109376112,109370467,109369017,109368325	Gene ID= ENSG00000135535.15 TPM= 4.18 Transcript Type= protein_coding
chr6	109366518	109382444	109366518	109382444	-	ENST00000324953.9@CD164	ENST00000324953.9	protein_coding	109382204,109379579,109377900,109376074,109366518	109382444,109379662,109377971,109376112,109369017	Gene ID= ENSG00000135535.15 TPM= 14.8 Transcript Type= protein_coding
chr6	109440763	109443919	109440763	109443919	+	ENST00000258052.7@SMPD2	ENST00000258052.7	protein_coding	109440763,109441357,109441552,109441974,109442210,109442543,109442752,109442977,109443267,109443517	109441171,109441453,109441628,109442067,109442299,109442625,109442884,109443081,109443420,109443919	Gene ID= ENSG00000135587.8 TPM= 5.79 Transcript Type= protein_coding
chr6	109444062	109455987	109444062	109455987	-	ENST00000358807.7@MICAL1	ENST00000358807.7	protein_coding	109455719,109453939,109453638,109453263,109452511,109452246,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455987,109454239,109453845,109453367,109452615,109452401,109451700,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 4.34 Transcript Type= protein_coding
chr6	109444062	109455754	109444062	109455754	-	transcript3531.chr6.nnic@MICAL1	transcript3531.chr6.nnic	protein_coding	109455719,109453939,109453638,109453263,109452511,109452246,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455754,109454239,109453845,109453367,109452615,109452401,109452119,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447577,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 2.41 Transcript Type= NA
chr6	109462594	109483237	109462594	109483237	-	ENST00000230122.3@ZBTB24	ENST00000230122.3	protein_coding	109483098,109481075,109476763,109476175,109475399,109467653,109462594	109483237,109482054,109476930,109476258,109475482,109467734,109466574	Gene ID= ENSG00000112365.4 TPM= 6.76 Transcript Type= protein_coding
chr6	109691312	109825428	109691312	109825428	+	ENST00000230124.7@FIG4	ENST00000230124.7	protein_coding	109691312,109715078,109716445,109727109,109732637,109735150,109738325,109741444,109743110,109743675,109760250,109762091,109763937,109765013,109766729,109776922,109784970,109786302,109789594,109791376,109792582,109796765,109825088	109691501,109715176,109716568,109727265,109732687,109735298,109738453,109741544,109743272,109743772,109760383,109762207,109763982,109765161,109766895,109777060,109785028,109786449,109789677,109791571,109792664,109796851,109825428	Gene ID= ENSG00000112367.10 TPM= 11.58 Transcript Type= protein_coding
chr6	110180141	110232223	110180141	110232223	+	ENST00000368932.5@CDC40	ENST00000368932.5	protein_coding	110180141,110180384,110193182,110201558,110207506,110209084,110210707,110212133,110213086,110215286,110217702,110219364,110219736,110226167,110228832,110229954	110180180,110180633,110193268,110201687,110207589,110209223,110210803,110212272,110213160,110215331,110217803,110219479,110219869,110226243,110228976,110232223	Gene ID= ENSG00000168438.14 TPM= 11.58 Transcript Type= protein_coding
chr6	110813158	110815474	110813158	110815474	-	transcript3561.chr6.nnic@NA	transcript3561.chr6.nnic	NA	110813158	110815474	Gene ID= novel_gene_chr6_3562 TPM= 1.93 Transcript Type= NA
chr6	110874770	110895713	110874770	110895713	+	ENST00000368885.7@AMD1	ENST00000368885.7	protein_coding	110874770,110887505,110888857,110890254,110892161,110892299,110892735,110892910,110893476	110875215,110887591,110888983,110890356,110892203,110892443,110892827,110893065,110895713	Gene ID= ENSG00000123505.15 TPM= 78.19 Transcript Type= protein_coding
chr6	110874770	110895713	110874770	110895713	+	ENST00000451850.6@AMD1	ENST00000451850.6	protein_coding	110874770,110892161,110892299,110892735,110892910,110893476	110875215,110892203,110892443,110892827,110893065,110895713	Gene ID= ENSG00000123505.15 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr6	110874911	110875671	110874911	110875671	-	transcript3572.chr6.nnic@NA	transcript3572.chr6.nnic	NA	110874911	110875671	Gene ID= novel_gene_chr6_3573 TPM= 2.9 Transcript Type= NA
chr6	110982017	111025587	110982017	111025587	+	transcript3574.chr6.nnic@RPF2	transcript3574.chr6.nnic	protein_coding	110982017,110985006,110989028,110991747,110996984,110997183,110999711,111008038,111015754,111024183,111025403	110982129,110985138,110989065,110991786,110997105,110997264,110999787,111008137,111015856,111024327,111025587	Gene ID= ENSG00000197498.12 TPM= 2.9 Transcript Type= NA
chr6	110982015	111026100	110982015	111026100	+	ENST00000441448.6@RPF2	ENST00000441448.6	protein_coding	110982015,110985006,110989028,110991747,110997183,110999711,111008038,111015754,111024183,111025403	110982129,110985138,110989065,110991786,110997264,110999787,111008137,111015856,111024327,111026100	Gene ID= ENSG00000197498.12 TPM= 34.75 Transcript Type= protein_coding
chr6	111026258	111028114	111026258	111028114	+	transcript3589.chr6.nnic@NA	transcript3589.chr6.nnic	NA	111026258	111028114	Gene ID= novel_gene_chr6_3590 TPM= 1.93 Transcript Type= NA
chr6	111087457	111225566	111087457	111225566	+	transcript3603.chr6.nic@SLC16A10	transcript3603.chr6.nic	protein_coding	111087457,111172695,111177212,111193293,111206592,111218814,111222003	111088095,111172839,111177665,111193324,111206735,111219042,111225566	Gene ID= ENSG00000112394.16 TPM= 4.83 Transcript Type= NA
chr6	111087511	111177712	111087511	111177712	+	transcript3626.chr6.nic@SLC16A10	transcript3626.chr6.nic	protein_coding	111087511,111172695,111177212	111088095,111172839,111177712	Gene ID= ENSG00000112394.16 TPM= 3.86 Transcript Type= NA
chr6	111087503	111177706	111087503	111177706	+	ENST00000612036.4@SLC16A10	ENST00000612036.4	protein_coding	111087503,111172695,111177212,111177566	111088095,111172839,111177563,111177706	Gene ID= ENSG00000112394.16 TPM= 2.9 Transcript Type= protein_coding
chr6	111087578	111223020	111087578	111223020	+	ENST00000368851.9@SLC16A10	ENST00000368851.9	protein_coding	111087578,111172695,111177212,111206592,111218814,111222003	111088095,111172839,111177665,111206735,111219042,111223020	Gene ID= ENSG00000112394.16 TPM= 13.51 Transcript Type= protein_coding
chr6	111225743	111228868	111225743	111228868	+	transcript3631.chr6.nnic@NA	transcript3631.chr6.nnic	NA	111225743	111228868	Gene ID= novel_gene_chr6_3632 TPM= 1.93 Transcript Type= NA
chr6	111374715	111483389	111374715	111483389	-	transcript3640.chr6.nnic@REV3L	transcript3640.chr6.nnic	protein_coding	111482750,111416283,111411480,111405470,111392876,111390086,111389106,111388001,111387765,111382273,111381325,111379982,111377701,111374715	111483389,111416472,111411554,111405630,111392972,111390180,111389210,111388085,111387913,111382390,111381444,111380219,111377843,111376757	Gene ID= ENSG00000009413.15 TPM= 3.03 Transcript Type= NA
chr6	111373572	111483297	111373572	111483297	-	transcript3641.chr6.nic@REV3L	transcript3641.chr6.nic	protein_coding	111482750,111416283,111411480,111405470,111392876,111390086,111389106,111388001,111387765,111381325,111379982,111377701,111373572	111483297,111416472,111411554,111405630,111392972,111390180,111389210,111388085,111387913,111381444,111380219,111377843,111376757	Gene ID= ENSG00000009413.15 TPM= 4.32 Transcript Type= NA
chr6	111386718	111483297	111386718	111483297	-	transcript3647.chr6.nic@REV3L	transcript3647.chr6.nic	protein_coding	111482750,111416283,111411480,111405470,111392876,111390086,111389106,111388001,111386718	111483297,111416472,111411554,111405630,111392972,111390180,111389210,111388085,111387913	Gene ID= ENSG00000009413.15 TPM= 4.48 Transcript Type= NA
chr6	111558940	111605871	111558940	111605871	-	ENST00000359831.8@TRAF3IP2	ENST00000359831.8	protein_coding	111605776,111591258,111580197,111575643,111572895,111567624,111566444,111562965,111558940	111605871,111592094,111580389,111575821,111572983,111567692,111566557,111563039,111559551	Gene ID= ENSG00000056972.18 TPM= 23.17 Transcript Type= protein_coding
chr6	111602307	111606070	111602307	111606070	-	transcript3659.chr6.nnic@NA	transcript3659.chr6.nnic	NA	111602307	111606070	Gene ID= novel_gene_chr6_3660 TPM= 1.93 Transcript Type= NA
chr6	111660332	111873452	111660332	111873452	-	ENST00000354650.7@FYN	ENST00000354650.7	protein_coding	111872968,111846589,111780566,111719805,111714347,111707922,111703999,111702885,111700104,111696277,111694628,111694375,111674499,111660332	111873452,111846629,111780635,111720062,111714443,111708020,111704102,111703034,111700268,111696456,111694704,111694528,111674630,111661947	Gene ID= ENSG00000010810.17 TPM= 7.72 Transcript Type= protein_coding
chr6	112070777	112087513	112070777	112087513	-	ENST00000368662.9@TUBE1	ENST00000368662.9	protein_coding	112087410,112087233,112086556,112084189,112081092,112079633,112076322,112075937,112074710,112072758,112071902,112070777	112087513,112087306,112086608,112084246,112081207,112079754,112076509,112076112,112074850,112072898,112072076,112071570	Gene ID= ENSG00000074935.13 TPM= 6.76 Transcript Type= protein_coding
chr6	112087638	112100895	112087638	112100895	+	ENST00000604268.1@FAM229B	ENST00000604268.1	protein_coding	112087638,112097041,112099270,112100670	112087709,112097201,112099408,112100895	Gene ID= ENSG00000203778.7 TPM= 3.86 Transcript Type= protein_coding
chr6	113857362	113863471	113857362	113863471	+	ENST00000612661.1@MARCKS	ENST00000612661.1	protein_coding	113857362,113859683	113857847,113863471	Gene ID= ENSG00000277443.2 TPM= 3.86 Transcript Type= protein_coding
chr6	113943380	113971163	113943380	113971163	-	transcript3699.chr6.nic@HDAC2	transcript3699.chr6.nic	protein_coding	113970857,113959906,113958649,113956619,113956013,113953277,113949168,113948979,113946008,113945362,113944280,113943380	113971163,113960018,113958766,113956693,113956151,113953418,113949260,113949087,113946148,113945470,113944410,113943506	Gene ID= ENSG00000196591.11 TPM= 7.72 Transcript Type= NA
chr6	113940718	113971157	113940718	113971157	-	ENST00000368632.6@HDAC2	ENST00000368632.6	protein_coding	113970857,113962367,113959906,113958649,113956619,113956013,113953277,113949168,113948979,113946008,113945362,113944280,113943351,113941708,113940718	113971157,113962394,113960018,113958766,113956693,113956151,113953418,113949260,113949087,113946148,113945470,113944410,113943506,113941765,113941088	Gene ID= ENSG00000196591.11 TPM= 75.29 Transcript Type= protein_coding
chr6	116100846	116244224	116100846	116244224	+	transcript3701.chr6.nnic@NT5DC1	transcript3701.chr6.nnic	protein_coding	116100846,116106244,116108364,116110850,116115691,116117861,116207126,116221054,116223034,116236966,116238187,116238955,116243909	116101023,116106335,116108435,116110956,116115770,116117945,116207215,116221228,116223131,116237084,116238348,116239123,116244224	Gene ID= ENSG00000178425.13 TPM= 1.93 Transcript Type= NA
chr6	116100882	116244215	116100882	116244215	+	transcript3702.chr6.nnic@NT5DC1	transcript3702.chr6.nnic	protein_coding	116100882,116106244,116108364,116110850,116115691,116117861,116221054,116223034,116236966,116238187,116238955,116241245,116243909	116101023,116106335,116108435,116110956,116115770,116117945,116221228,116223131,116237084,116238348,116239123,116241310,116244215	Gene ID= ENSG00000178425.13 TPM= 1.93 Transcript Type= NA
chr6	116276578	116279903	116276578	116279903	-	ENST00000368608.3@TSPYL1	ENST00000368608.3	protein_coding	116276578	116279903	Gene ID= ENSG00000189241.6 TPM= 102.32 Transcript Type= protein_coding
chr6	116370358	116441261	116370358	116441261	+	ENST00000331677.7@DSE	ENST00000331677.7	protein_coding	116370358,116370870,116399198,116426574,116430954,116433343,116435587	116370496,116371121,116399666,116426827,116431193,116433550,116441261	Gene ID= ENSG00000111817.16 TPM= 1.93 Transcript Type= protein_coding
chr6	116370947	116438277	116370947	116438277	+	ENST00000359564.2@DSE	ENST00000359564.2	protein_coding	116370947,116399198,116426574,116430954,116433343,116435587	116371121,116399666,116426827,116431193,116433550,116438277	Gene ID= ENSG00000111817.16 TPM= 1.93 Transcript Type= protein_coding
chr6	116571440	116593268	116571440	116593268	+	transcript3722.chr6.nic@RWDD1	transcript3722.chr6.nic	protein_coding	116571440,116572858,116574058,116580295,116584727,116588842,116590272,116590888,116592980	116571655,116572985,116574171,116580360,116584857,116588985,116590404,116590950,116593268	Gene ID= ENSG00000111832.12 TPM= 5.31 Transcript Type= NA
chr6	116571367	116597675	116571367	116597675	+	ENST00000466444.6@RWDD1	ENST00000466444.6	protein_coding	116571367,116580295,116584727,116588842,116590272,116590888,116592980	116571655,116580360,116584857,116588985,116590404,116590950,116597675	Gene ID= ENSG00000111832.12 TPM= 63.71 Transcript Type= protein_coding
chr6	116571454	116588936	116571454	116588936	+	transcript3731.chr6.nic@RWDD1	transcript3731.chr6.nic	protein_coding	116571454,116574058,116580295,116584727,116588842	116571655,116574171,116580360,116584857,116588936	Gene ID= ENSG00000111832.12 TPM= 3.86 Transcript Type= NA
chr6	116635618	116668794	116635618	116668794	-	ENST00000368576.7@ZUFSP	ENST00000368576.7	protein_coding	116668566,116666634,116660736,116658803,116656684,116652004,116651572,116647459,116645714,116635618	116668794,116667207,116660846,116658924,116656852,116652192,116651737,116647610,116645934,116635879	Gene ID= ENSG00000153975.9 TPM= 4.83 Transcript Type= protein_coding
chr6	116681230	116734731	116681230	116734731	+	transcript3744.chr6.nnic@KPNA5	transcript3744.chr6.nnic	protein_coding	116681230,116689320,116692055,116698704,116702019,116705072,116716219,116722126,116724297,116725751,116726495,116729563,116732136	116681338,116689453,116692156,116698798,116702150,116705160,116716318,116722289,116724375,116725876,116726622,116729741,116734731	Gene ID= ENSG00000196911.10 TPM= 1.93 Transcript Type= NA
chr6	116681211	116741866	116681211	116741866	+	ENST00000356348.6@KPNA5	ENST00000356348.6	protein_coding	116681211,116689320,116692055,116692293,116698704,116702019,116705072,116716219,116722126,116724297,116725751,116726495,116729563,116732136,116741506	116681338,116689453,116692156,116692392,116698798,116702150,116705160,116716318,116722289,116724375,116725876,116726622,116729741,116732368,116741866	Gene ID= ENSG00000196911.10 TPM= 5.79 Transcript Type= protein_coding
chr6	116749107	116765833	116749107	116765833	-	transcript3748.chr6.nic@FAM162B	transcript3748.chr6.nic	protein_coding	116765147,116761977,116749107	116765833,116762085,116752695	Gene ID= ENSG00000183807.7 TPM= 1.93 Transcript Type= NA
chr6	116752197	116765831	116752197	116765831	-	transcript3750.chr6.nnic@FAM162B	transcript3750.chr6.nnic	protein_coding	116765405,116761977,116752197	116765831,116762085,116752695	Gene ID= ENSG00000183807.7 TPM= 1.93 Transcript Type= NA
chr6	117265558	117273560	117265558	117273560	+	transcript3755.chr6.nnic@VGLL2	transcript3755.chr6.nnic	protein_coding	117265558,117268182,117270543,117272309	117265844,117268491,117271064,117273560	Gene ID= ENSG00000170162.13 TPM= 9.73 Transcript Type= NA
chr6	117265558	117273565	117265558	117273565	+	ENST00000352536.7@VGLL2	ENST00000352536.7	protein_coding	117265558,117268182,117272454	117265844,117268491,117273565	Gene ID= ENSG00000170162.13 TPM= 23.24 Transcript Type= protein_coding
chr6	117265574	117273562	117265574	117273562	+	ENST00000326274.5@VGLL2	ENST00000326274.5	protein_coding	117265574,117268182,117270543,117272454	117265844,117268491,117271064,117273562	Gene ID= ENSG00000170162.13 TPM= 118.81 Transcript Type= protein_coding
chr6	117482655	117549797	117482655	117549797	+	transcript3772.chr6.nic@DCBLD1	transcript3772.chr6.nic	protein_coding	117482655,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117544528,117545478,117547907	117482893,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117544577,117545597,117549797	Gene ID= ENSG00000164465.18 TPM= 1.93 Transcript Type= NA
chr6	117482657	117569858	117482657	117569858	+	ENST00000296955.12@DCBLD1	ENST00000296955.12	protein_coding	117482657,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117543124,117544528,117545478,117569620	117482893,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117543211,117544577,117545597,117569858	Gene ID= ENSG00000164465.18 TPM= 1.93 Transcript Type= protein_coding
chr6	117482662	117549797	117482662	117549797	+	ENST00000338728.9@DCBLD1	ENST00000338728.9	protein_coding	117482662,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117543124,117544528,117545478,117547907	117482893,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117543211,117544577,117545597,117549797	Gene ID= ENSG00000164465.18 TPM= 8.69 Transcript Type= protein_coding
chr6	117560272	117602542	117560272	117602542	-	ENST00000535237.2@GOPC	ENST00000535237.2	protein_coding	117602004,117578900,117577448,117575177,117573467,117570860,117566854,117560272	117602542,117579064,117577471,117575352,117573632,117570955,117567034,117563384	Gene ID= ENSG00000047932.13 TPM= 6.76 Transcript Type= protein_coding
chr6	117675502	117710640	117675502	117710640	+	ENST00000368494.3@NUS1	ENST00000368494.3	protein_coding	117675502,117693042,117694031,117703605,117706925	117676085,117693167,117694180,117703704,117710640	Gene ID= ENSG00000153989.7 TPM= 2.9 Transcript Type= protein_coding
chr6	118460772	118651891	118460772	118651891	-	ENST00000368491.7@CEP85L	ENST00000368491.7	protein_coding	118651197,118632453,118565529,118523802,118511298,118491686,118483706,118481779,118480396,118479871,118470537,118469072,118460772	118651891,118632611,118566316,118523920,118511415,118491865,118483858,118481933,118480513,118479921,118470644,118469303,118465568	Gene ID= ENSG00000111860.13 TPM= 3.86 Transcript Type= protein_coding
chr6	118491632	118651857	118491632	118651857	-	ENST00000419517.2@CEP85L	ENST00000419517.2	protein_coding	118651197,118632453,118565529,118523802,118511298,118491632	118651857,118632611,118566316,118523920,118511415,118491865	Gene ID= ENSG00000111860.13 TPM= 2.9 Transcript Type= protein_coding
chr6	118548298	118560730	118548298	118560730	+	ENST00000357525.5@PLN	ENST00000357525.5	protein_coding	118548298,118558825	118548392,118560730	Gene ID= ENSG00000198523.5 TPM= 10.62 Transcript Type= protein_coding
chr6	118894220	118909167	118894220	118909167	+	ENST00000229595.5@ASF1A	ENST00000229595.5	protein_coding	118894220,118900766,118905652,118907402	118894522,118900881,118905828,118909167	Gene ID= ENSG00000111875.7 TPM= 19.31 Transcript Type= protein_coding
chr6	119177209	119349761	119177209	119349761	-	ENST00000368468.3@MAN1A1	ENST00000368468.3	protein_coding	119349542,119348463,119306896,119301988,119290683,119248260,119204759,119201254,119193777,119189664,119188405,119180312,119177209	119349761,119349287,119306992,119302103,119290763,119248354,119204882,119201347,119193892,119189883,119188577,119180427,119179945	Gene ID= ENSG00000111885.6 TPM= 3.86 Transcript Type= protein_coding
chr6	122399620	122420410	122399620	122420410	+	transcript3842.chr6.nic@HSF2	transcript3842.chr6.nic	protein_coding	122399620,122412373,122412637,122413525,122416221,122419168,122420135	122399830,122412481,122412764,122413649,122416296,122419229,122420410	Gene ID= ENSG00000025156.12 TPM= 6.27 Transcript Type= NA
chr6	122399546	122432966	122399546	122432966	+	ENST00000368455.8@HSF2	ENST00000368455.8	protein_coding	122399546,122412373,122412637,122413525,122416221,122419168,122420135,122422150,122422718,122423581,122427903,122431430,122431925	122399830,122412481,122412764,122413649,122416296,122419229,122420222,122422298,122422957,122423686,122427956,122431514,122432966	Gene ID= ENSG00000025156.12 TPM= 136.59 Transcript Type= protein_coding
chr6	122438578	122441346	122438578	122441346	+	transcript3844.chr6.nnic@NA	transcript3844.chr6.nnic	NA	122438578	122441346	Gene ID= novel_gene_chr6_3845 TPM= 112.94 Transcript Type= NA
chr6	122443354	122471819	122443354	122471819	-	transcript3849.chr6.nnic@SERINC1	transcript3849.chr6.nnic	protein_coding	122471699,122458520,122456481,122454151,122453770,122447121,122446774,122443354	122471819,122458681,122456650,122454230,122453907,122447265,122447004,122445179	Gene ID= ENSG00000111897.6 TPM= 5.79 Transcript Type= NA
chr6	122443354	122471822	122443354	122471822	-	ENST00000339697.4@SERINC1	ENST00000339697.4	protein_coding	122471699,122458520,122456481,122454151,122453770,122451888,122451664,122447121,122446774,122443354	122471822,122458681,122456650,122454230,122453907,122452057,122451754,122447265,122447004,122445179	Gene ID= ENSG00000111897.6 TPM= 238.43 Transcript Type= protein_coding
chr6	122779475	122784074	122779475	122784074	+	ENST00000368444.7@FABP7	ENST00000368444.7	protein_coding	122779475,122780291,122781093,122783717	122779867,122780463,122781194,122784074	Gene ID= ENSG00000164434.11 TPM= 72.4 Transcript Type= protein_coding
chr6	122789170	122809720	122789170	122809720	+	ENST00000368440.4@SMPDL3A	ENST00000368440.4	protein_coding	122789170,122795677,122796824,122801310,122803664,122804909,122806233,122809091	122789458,122795890,122796968,122801406,122803833,122805089,122806357,122809720	Gene ID= ENSG00000172594.12 TPM= 8.69 Transcript Type= protein_coding
chr6	122789049	122809717	122789049	122809717	+	ENST00000539041.5@SMPDL3A	ENST00000539041.5	protein_coding	122789049,122796824,122801310,122803664,122804909,122806233,122809091	122789458,122796968,122801406,122803833,122805089,122806357,122809717	Gene ID= ENSG00000172594.12 TPM= 7.83 Transcript Type= protein_coding
chr6	122789293	122809720	122789293	122809720	+	transcript3858.chr6.nnic@SMPDL3A	transcript3858.chr6.nnic	protein_coding	122789293,122796824,122803664,122804496,122804909,122806233,122809091	122789458,122796968,122803833,122804521,122805089,122806357,122809720	Gene ID= ENSG00000172594.12 TPM= 2.04 Transcript Type= NA
chr6	122789218	122809720	122789218	122809720	+	transcript3859.chr6.nnic@SMPDL3A	transcript3859.chr6.nnic	protein_coding	122789218,122795677,122796824,122801310,122803664,122804909,122809091	122789458,122795890,122796968,122801406,122803833,122805089,122809720	Gene ID= ENSG00000172594.12 TPM= 4.93 Transcript Type= NA
chr6	122789218	122809720	122789218	122809720	+	transcript3860.chr6.nnic@SMPDL3A	transcript3860.chr6.nnic	protein_coding	122789218,122795677,122796824,122803664,122804909,122806233,122809091	122789458,122795890,122796968,122803833,122805089,122806357,122809720	Gene ID= ENSG00000172594.12 TPM= 3.97 Transcript Type= NA
chr6	122789205	122809720	122789205	122809720	+	transcript3862.chr6.nnic@SMPDL3A	transcript3862.chr6.nnic	protein_coding	122789205,122796824,122801310,122803664,122804909,122809091	122789458,122796968,122801406,122803833,122805089,122809720	Gene ID= ENSG00000172594.12 TPM= 10.72 Transcript Type= NA
chr6	122789205	122809720	122789205	122809720	+	transcript3867.chr6.nnic@SMPDL3A	transcript3867.chr6.nnic	protein_coding	122789205,122796824,122803664,122804909,122809091	122789458,122796968,122803833,122805089,122809720	Gene ID= ENSG00000172594.12 TPM= 7.83 Transcript Type= NA
chr6	122789205	122809720	122789205	122809720	+	transcript3868.chr6.nnic@SMPDL3A	transcript3868.chr6.nnic	protein_coding	122789205,122796824,122804909,122806233,122809091	122789458,122796968,122805089,122806357,122809720	Gene ID= ENSG00000172594.12 TPM= 4.93 Transcript Type= NA
chr6	122789258	122809720	122789258	122809720	+	transcript3870.chr6.nnic@SMPDL3A	transcript3870.chr6.nnic	protein_coding	122789258,122796824,122804909,122809091	122789458,122796968,122805089,122809720	Gene ID= ENSG00000172594.12 TPM= 5.9 Transcript Type= NA
chr6	123216339	123637093	123216339	123637093	-	ENST00000334268.8@TRDN	ENST00000334268.8	protein_coding	123636754,123570923,123548454,123547340,123530506,123516141,123512303,123503719,123497193,123464906,123438944,123438063,123393624,123388522,123382118,123381370,123377866,123377716,123375605,123366135,123352539,123337619,123331879,123316457,123279056,123278318,123274641,123273337,123272964,123271139,123269849,123267707,123265318,123260612,123259624,123255867,123255081,123252412,123224093,123221487,123216339	123637093,123571132,123548612,123547372,123530565,123516206,123512362,123503901,123497252,123464983,123439003,123438122,123393677,123388551,123382147,123381390,123377898,123377742,123375631,123366182,123352586,123337669,123331929,123316495,123279082,123278347,123274670,123273363,123273011,123271186,123269866,123267751,123265338,123260638,123259662,123255902,123255125,123252435,123224131,123221522,123218740	Gene ID= ENSG00000186439.12 TPM= 26.66 Transcript Type= protein_coding
chr6	123349480	123636988	123349480	123636988	-	transcript3883.chr6.nic@TRDN	transcript3883.chr6.nic	protein_coding	123636754,123570923,123548454,123547340,123530506,123516141,123512303,123503719,123497193,123464906,123438944,123438063,123393624,123388522,123382118,123381370,123377866,123377716,123375605,123366135,123349480	123636988,123571132,123548612,123547372,123530565,123516206,123512362,123503901,123497252,123464983,123439003,123438122,123393677,123388551,123382147,123381390,123377898,123377742,123375631,123366182,123352586	Gene ID= ENSG00000186439.12 TPM= 32.94 Transcript Type= NA
chr6	123528681	123636972	123528681	123636972	-	ENST00000542443.5@TRDN	ENST00000542443.5	protein_coding	123636754,123570923,123548454,123547340,123530506,123528681	123636972,123571132,123548612,123547372,123530565,123529293	Gene ID= ENSG00000186439.12 TPM= 1.45 Transcript Type= protein_coding
chr6	123519418	123555092	123519418	123555092	+	transcript3915.chr6.nnic@NA	transcript3915.chr6.nnic	NA	123519418,123519885,123531606,123540205,123553356	123519755,123521608,123531666,123540298,123555092	Gene ID= novel_gene_chr6_3916 TPM= 2.9 Transcript Type= NA
chr6	123802130	123804070	123802130	123804070	-	transcript3926.chr6.nnic@NA	transcript3926.chr6.nnic	NA	123802130	123804070	Gene ID= novel_gene_chr6_3927 TPM= 1.93 Transcript Type= NA
chr6	124961987	125083722	124961987	125083722	+	transcript3928.chr6.nnic@RNF217	transcript3928.chr6.nnic	protein_coding	124961987,125045211,125057942,125076657,125081095,125081436,125082864	124963426,125045444,125058106,125076858,125081164,125081507,125083722	Gene ID= ENSG00000146373.16 TPM= 1.93 Transcript Type= NA
chr6	125153649	125263497	125153649	125263497	+	ENST00000304877.17@TPD52L1	ENST00000304877.17	protein_coding	125153649,125220078,125229118,125248282,125252022,125253717,125257098,125262834	125153970,125220193,125229266,125248383,125252036,125253755,125257158,125263497	Gene ID= ENSG00000111907.20 TPM= 60.81 Transcript Type= protein_coding
chr6	125203711	125263497	125203711	125263497	+	transcript3942.chr6.nic@TPD52L1	transcript3942.chr6.nic	protein_coding	125203711,125220078,125229118,125248282,125252022,125253717,125257098,125262834	125203777,125220193,125229266,125248383,125252036,125253755,125257158,125263497	Gene ID= ENSG00000111907.20 TPM= 7.72 Transcript Type= NA
chr6	125153656	125264407	125153656	125264407	+	ENST00000534000.5@TPD52L1	ENST00000534000.5	protein_coding	125153656,125220078,125229118,125248282,125253717,125257098,125262834	125153970,125220193,125229266,125248383,125253755,125257158,125264407	Gene ID= ENSG00000111907.20 TPM= 1.93 Transcript Type= protein_coding
chr6	125153733	125263497	125153733	125263497	+	ENST00000368402.9@TPD52L1	ENST00000368402.9	protein_coding	125153733,125220078,125229118,125248282,125253717,125262834	125153970,125220193,125229266,125248383,125253755,125263497	Gene ID= ENSG00000111907.20 TPM= 72.4 Transcript Type= protein_coding
chr6	125153827	125156478	125153827	125156478	+	transcript3963.chr6.nnic@NA	transcript3963.chr6.nnic	NA	125153827	125156478	Gene ID= novel_gene_chr6_3964 TPM= 2.9 Transcript Type= NA
chr6	125275882	125301756	125275882	125301756	-	transcript3968.chr6.nnic@HDDC2	transcript3968.chr6.nnic	protein_coding	125301598,125300538,125298714,125292841,125277102,125275882	125301756,125300659,125298816,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 2.09 Transcript Type= NA
chr6	125275882	125302117	125275882	125302117	-	transcript3970.chr6.nnic@HDDC2	transcript3970.chr6.nnic	protein_coding	125302033,125300538,125298714,125292841,125277102,125275882	125302117,125300659,125298816,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 2.09 Transcript Type= NA
chr6	125275882	125302145	125275882	125302145	-	transcript3971.chr6.nnic@HDDC2	transcript3971.chr6.nnic	protein_coding	125301849,125300538,125292828,125277102,125275882	125302145,125300659,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 6.92 Transcript Type= NA
chr6	125275882	125301851	125275882	125301851	-	transcript3973.chr6.nnic@HDDC2	transcript3973.chr6.nnic	protein_coding	125301598,125300538,125292841,125277102,125275882	125301851,125300659,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 3.06 Transcript Type= NA
chr6	125275882	125302117	125275882	125302117	-	transcript3975.chr6.nnic@HDDC2	transcript3975.chr6.nnic	protein_coding	125302033,125300538,125292841,125277102,125275882	125302117,125300659,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 2.09 Transcript Type= NA
chr6	125275886	125301975	125275886	125301975	-	ENST00000398153.6@HDDC2	ENST00000398153.6	protein_coding	125301849,125300538,125298714,125292841,125277102,125275886	125301975,125300659,125298816,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 27.19 Transcript Type= protein_coding
chr6	125743221	125746573	125743221	125746573	-	transcript3977.chr6.nnic@NA	transcript3977.chr6.nnic	NA	125743221	125746573	Gene ID= novel_gene_chr6_3978 TPM= 1.93 Transcript Type= NA
chr6	125956781	125980244	125956781	125980244	+	ENST00000229633.6@HINT3	ENST00000229633.6	protein_coding	125956781,125966887,125972259,125974847,125977644	125957178,125967004,125972328,125974973,125980244	Gene ID= ENSG00000111911.6 TPM= 66.61 Transcript Type= protein_coding
chr6	125986479	126039276	125986479	126039276	+	ENST00000368332.7@TRMT11	ENST00000368332.7	protein_coding	125986479,125993757,125995967,125998053,125998223,125998550,125999457,126008392,126011253,126012771,126012970,126021160,126038705	125986622,125993822,125996040,125998134,125998315,125998684,125999613,126008472,126011417,126012852,126013101,126021265,126039276	Gene ID= ENSG00000066651.18 TPM= 7.72 Transcript Type= protein_coding
chr6	127118671	127155438	127118671	127155438	+	transcript4005.chr6.nic@RSPO3	transcript4005.chr6.nic	protein_coding	127118671,127148648,127150426,127155241	127119289,127148839,127150572,127155438	Gene ID= ENSG00000146374.13 TPM= 6.76 Transcript Type= NA
chr6	127266738	127288554	127266738	127288554	+	ENST00000309649.7@RNF146	ENST00000309649.7	protein_coding	127266738,127280231,127280516,127286050,127286616	127267095,127280340,127280604,127286177,127288554	Gene ID= ENSG00000118518.15 TPM= 2.9 Transcript Type= protein_coding
chr6	127266868	127270074	127266868	127270074	+	transcript4025.chr6.nnic@NA	transcript4025.chr6.nnic	NA	127266868	127270074	Gene ID= novel_gene_chr6_4026 TPM= 6.76 Transcript Type= NA
chr6	127288710	127343609	127288710	127343609	-	ENST00000454859.7@ECHDC1	ENST00000454859.7	protein_coding	127343336,127330809,127327002,127316450,127314816,127288710	127343609,127331030,127327144,127316502,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 19.79 Transcript Type= protein_coding
chr6	127288720	127343346	127288720	127343346	-	ENST00000474289.6@ECHDC1	ENST00000474289.6	protein_coding	127342961,127330809,127327002,127316450,127314816,127288720	127343346,127331030,127327144,127316502,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 3.38 Transcript Type= protein_coding
chr6	127289634	127343599	127289634	127343599	-	ENST00000368291.6@ECHDC1	ENST00000368291.6	protein_coding	127343336,127330809,127327002,127314816,127289634	127343599,127331030,127327144,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 1.93 Transcript Type= protein_coding
chr6	127441338	127441481	127441338	127441481	-	transcript4030.chr6.nnic@NA	transcript4030.chr6.nnic	NA	127441338	127441481	Gene ID= novel_gene_chr6_4031 TPM= 1.93 Transcript Type= NA
chr6	127968779	128520674	127968779	128520674	-	ENST00000368226.8@PTPRK	ENST00000368226.8	protein_coding	128520259,128397566,128322039,128242521,128240035,128218922,128184432,128089690,128083715,128082437,128078813,128067519,128064758,128009130,128005084,127998720,127996901,127995462,127992673,127991294,127990769,127985721,127983242,127982831,127981116,127976923,127976657,127973664,127973022,127968779	128520674,128397688,128322310,128242602,128240150,128219096,128184725,128089992,128083824,128082638,128078918,128067792,128064794,128009268,128005244,127998904,127996988,127995538,127992709,127991391,127990885,127985875,127983377,127982980,127981289,127977054,127976782,127973827,127973157,127970280	Gene ID= ENSG00000152894.14 TPM= 2.9 Transcript Type= protein_coding
chr6	128159869	128520480	128159869	128520480	-	transcript4038.chr6.nnic@PTPRK	transcript4038.chr6.nnic	protein_coding	128520259,128397566,128322039,128242521,128240035,128218922,128184432,128159869	128520480,128397688,128322310,128242602,128240150,128219096,128184725,128161404	Gene ID= ENSG00000152894.14 TPM= 1.93 Transcript Type= NA
chr6	128181197	128520475	128181197	128520475	-	transcript4039.chr6.nnic@PTPRK	transcript4039.chr6.nnic	protein_coding	128520259,128397566,128322039,128242521,128240035,128218922,128184432,128181197	128520475,128397688,128322310,128242602,128240150,128219096,128184725,128182832	Gene ID= ENSG00000152894.14 TPM= 1.93 Transcript Type= NA
chr6	128518928	128520570	128518928	128520570	-	ENST00000368202.4@PTPRK	ENST00000368202.4	protein_coding	128520259,128518928	128520570,128519141	Gene ID= ENSG00000152894.14 TPM= 1.93 Transcript Type= processed_transcript
chr6	128520719	128521149	128520719	128521149	+	transcript4043.chr6.nnic@NA	transcript4043.chr6.nnic	NA	128520719	128521149	Gene ID= novel_gene_chr6_4044 TPM= 2.9 Transcript Type= NA
chr6	130839347	131063322	130839347	131063322	-	ENST00000628542.2@EPB41L2	ENST00000628542.2	protein_coding	131063155,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130869563,130867459,130865536,130863638,130858131,130839347	131063322,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130870126,130867581,130865634,130863718,130858243,130840598	Gene ID= ENSG00000079819.18 TPM= 3.86 Transcript Type= protein_coding
chr6	131135318	131283532	131135318	131283532	+	transcript4057.chr6.nnic@AKAP7	transcript4057.chr6.nnic	protein_coding	131135318,131145285,131160059,131165081,131169113,131199461,131200327,131219661,131282399	131135782,131145416,131160198,131165217,131169273,131199573,131200489,131219808,131283532	Gene ID= ENSG00000118507.15 TPM= 2.58 Transcript Type= NA
chr6	131135257	131283530	131135257	131283530	+	transcript4063.chr6.nnic@AKAP7	transcript4063.chr6.nnic	protein_coding	131135257,131145285,131160059,131165081,131169113,131199461,131281530	131135782,131145416,131160198,131165217,131169273,131199573,131283530	Gene ID= ENSG00000118507.15 TPM= 2.41 Transcript Type= NA
chr6	131135666	131283535	131135666	131283535	+	ENST00000431975.6@AKAP7	ENST00000431975.6	protein_coding	131135666,131145285,131160059,131165081,131169113,131199461,131219661,131281530	131135782,131145416,131160198,131165217,131169273,131199573,131219808,131283535	Gene ID= ENSG00000118507.15 TPM= 3.06 Transcript Type= protein_coding
chr6	131135737	131283532	131135737	131283532	+	ENST00000541650.5@AKAP7	ENST00000541650.5	protein_coding	131135737,131145288,131160059,131165081,131169113,131199461,131219661,131282399	131135782,131145416,131160198,131165217,131169273,131199573,131219808,131283532	Gene ID= ENSG00000118507.15 TPM= 3.54 Transcript Type= protein_coding
chr6	131586738	131628240	131586738	131628240	-	transcript4070.chr6.nic@MED23	transcript4070.chr6.nic	protein_coding	131628011,131627641,131627396,131624865,131623351,131621881,131620628,131619827,131618407,131615907,131615324,131610046,131607928,131606479,131605240,131604178,131603030,131602218,131600038,131598556,131598287,131596518,131595947,131594099,131593006,131592388,131591313,131590322,131589465,131586738	131628240,131627672,131627483,131624989,131623462,131621979,131620729,131619896,131618519,131616002,131615341,131610246,131608071,131606624,131605485,131604320,131603204,131602381,131600162,131598761,131598467,131596688,131596163,131594335,131593171,131592460,131591527,131590442,131589596,131587846	Gene ID= ENSG00000112282.17 TPM= 5.79 Transcript Type= NA
chr6	131573966	131628205	131573966	131628205	-	ENST00000354577.8@MED23	ENST00000354577.8	protein_coding	131628011,131627641,131627396,131624865,131623351,131621881,131620628,131619827,131618407,131615907,131615324,131610046,131607928,131606479,131605240,131604178,131603030,131602218,131600038,131598556,131598287,131596518,131595947,131594099,131593006,131592388,131591313,131590322,131589465,131587709,131573966	131628205,131627672,131627483,131624989,131623462,131621979,131620729,131619896,131618519,131616002,131615341,131610246,131608071,131606624,131605485,131604320,131603204,131602381,131600162,131598761,131598467,131596688,131596163,131594335,131593171,131592460,131591527,131590442,131589596,131587846,131574295	Gene ID= ENSG00000112282.17 TPM= 1.93 Transcript Type= protein_coding
chr6	131586733	131628229	131586733	131628229	-	ENST00000368068.7@MED23	ENST00000368068.7	protein_coding	131628011,131627641,131627396,131624865,131623351,131621881,131620628,131619827,131618407,131615907,131610046,131607928,131606479,131605240,131604178,131603030,131602218,131600038,131598556,131598287,131596518,131595947,131594099,131593006,131592388,131591313,131590322,131589465,131586733	131628229,131627672,131627483,131624989,131623462,131621979,131620729,131619896,131618519,131616002,131610246,131608071,131606624,131605485,131604320,131603204,131602381,131600162,131598761,131598467,131596688,131596163,131594335,131593171,131592460,131591527,131590442,131589596,131587846	Gene ID= ENSG00000112282.17 TPM= 4.83 Transcript Type= protein_coding
chr6	131808016	131895155	131808016	131895155	+	ENST00000360971.6@ENPP1	ENST00000360971.6	protein_coding	131808016,131847776,131849990,131851142,131852175,131854926,131858668,131860387,131861595,131864506,131864866,131868018,131869358,131872070,131872923,131874268,131875776,131876992,131878542,131879880,131882345,131883694,131884931,131886562,131890341	131808275,131847848,131850106,131851267,131852235,131855023,131858747,131860506,131861704,131864571,131864938,131868126,131869489,131872101,131873050,131874337,131875863,131877161,131878593,131880034,131882474,131883774,131885063,131886724,131895155	Gene ID= ENSG00000197594.11 TPM= 1.93 Transcript Type= protein_coding
chr6	131948176	131951373	131948176	131951373	-	ENST00000367976.3@CTGF	ENST00000367976.3	protein_coding	131951107,131950770,131950292,131949949,131948176	131951373,131950992,131950543,131950160,131949560	Gene ID= ENSG00000118523.5 TPM= 28.48 Transcript Type= protein_coding
chr6	131948176	131950167	131948176	131950167	-	transcript4079.chr6.nic@CTGF	transcript4079.chr6.nic	protein_coding	131949949,131948176	131950167,131949560	Gene ID= ENSG00000118523.5 TPM= 2.41 Transcript Type= NA
chr6	132769370	132798553	132769370	132798553	-	ENST00000275227.8@SLC18B1	ENST00000275227.8	protein_coding	132798414,132796982,132790177,132789764,132787434,132783933,132779268,132776328,132774222,132772993,132772132,132771036,132770890,132769370	132798553,132797121,132790272,132789837,132787581,132784089,132779404,132776429,132774313,132773088,132772206,132771129,132770939,132770336	Gene ID= ENSG00000146409.10 TPM= 2.9 Transcript Type= protein_coding
chr6	132814441	132817564	132814441	132817564	+	ENST00000230050.3@RPS12	ENST00000230050.3	protein_coding	132814441,132814732,132814972,132816461,132816960,132817480	132814613,132814782,132815088,132816563,132817061,132817564	Gene ID= ENSG00000112306.7 TPM= 702.1 Transcript Type= protein_coding
chr6	132814569	132817564	132814569	132817564	+	ENST00000484616.2@RPS12	ENST00000484616.2	protein_coding	132814569,132814732,132814972,132816461,132816960,132817480	132814613,132814782,132815224,132816563,132817061,132817564	Gene ID= ENSG00000112306.7 TPM= 47.62 Transcript Type= retained_intron
chr6	133240317	133242357	133240317	133242357	-	transcript4108.chr6.nnic@NA	transcript4108.chr6.nnic	NA	133242219,133240317	133242357,133241656	Gene ID= novel_gene_chr6_4109 TPM= 5.79 Transcript Type= NA
chr6	133240320	133242357	133240320	133242357	-	transcript4110.chr6.nnic@NA	transcript4110.chr6.nnic	NA	133242029,133240320	133242357,133241656	Gene ID= novel_gene_chr6_4111 TPM= 7.72 Transcript Type= NA
chr6	133241348	133533912	133241348	133533912	+	transcript4103.chr6.nnic@EYA4	transcript4103.chr6.nnic	protein_coding	133241348,133274716,133382392,133446630,133448111,133456556,133461114,133462364,133462621,133464779,133468566,133481463,133483032,133506106,133512721,133512878,133515321,133523056,133525154,133532849	133241749,133274813,133382441,133446754,133448179,133456648,133461180,133462477,133462764,133464858,133468731,133481599,133483115,133506195,133512779,133513038,133515435,133523177,133525254,133533912	Gene ID= ENSG00000112319.17 TPM= 5.79 Transcript Type= NA
chr6	133241409	133382810	133241409	133382810	+	transcript4104.chr6.nic@EYA4	transcript4104.chr6.nic	protein_coding	133241409,133274716,133382392	133241749,133274813,133382810	Gene ID= ENSG00000112319.17 TPM= 1.93 Transcript Type= NA
chr6	133241348	133276929	133241348	133276929	+	transcript4107.chr6.nic@EYA4	transcript4107.chr6.nic	protein_coding	133241348,133274716	133241749,133276929	Gene ID= ENSG00000112319.17 TPM= 4.83 Transcript Type= NA
chr6	134169252	134174896	134169252	134174896	-	ENST00000237305.11@SGK1	ENST00000237305.11	protein_coding	134174732,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134171023,134170826,134169252	134174896,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170915,134170435	Gene ID= ENSG00000118515.11 TPM= 74.33 Transcript Type= protein_coding
chr6	134169250	134175991	134169250	134175991	-	ENST00000413996.7@SGK1	ENST00000413996.7	protein_coding	134175544,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134171023,134170826,134169250	134175991,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170915,134170435	Gene ID= ENSG00000118515.11 TPM= 22.2 Transcript Type= protein_coding
chr6	134169284	134174842	134169284	134174842	-	ENST00000367855.7@SGK1	ENST00000367855.7	protein_coding	134174732,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134170826,134169284	134174842,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170435	Gene ID= ENSG00000118515.11 TPM= 3.86 Transcript Type= retained_intron
chr6	134174964	134175970	134174964	134175970	+	transcript4129.chr6.nnic@NA	transcript4129.chr6.nnic	NA	134174964	134175970	Gene ID= novel_gene_chr6_4130 TPM= 3.86 Transcript Type= NA
chr6	134960378	135054898	134960378	135054898	-	ENST00000367837.9@HBS1L	ENST00000367837.9	protein_coding	135054649,135050582,135042001,135039573,135002734,134997397,134996777,134993758,134987645,134986736,134986066,134985341,134982458,134979178,134978679,134969238,134966329,134960378	135054898,135050647,135042126,135039767,135002842,134997656,134996942,134993875,134987791,134986810,134986183,134985409,134982562,134979268,134978787,134969338,134966473,134965290	Gene ID= ENSG00000112339.14 TPM= 173.76 Transcript Type= protein_coding
chr6	134964631	135054820	134964631	135054820	-	transcript4143.chr6.nnic@HBS1L	transcript4143.chr6.nnic	protein_coding	135054649,135050582,135042001,135039573,135002734,134997397,134996777,134993758,134987645,134986736,134986066,134985341,134982458,134979178,134978679,134966329,134964631	135054820,135050647,135042126,135039767,135002842,134997656,134996942,134993875,134987791,134986810,134986183,134985409,134982562,134979268,134978787,134966473,134965290	Gene ID= ENSG00000112339.14 TPM= 13.51 Transcript Type= NA
chr6	134964633	135054819	134964633	135054819	-	ENST00000367826.6@HBS1L	ENST00000367826.6	protein_coding	135054649,135050582,135039573,135002734,134997397,134996777,134993758,134987645,134986736,134986066,134985341,134982458,134979178,134978679,134969238,134966329,134964633	135054819,135050647,135039767,135002842,134997656,134996942,134993875,134987791,134986810,134986183,134985409,134982562,134979268,134978787,134969338,134966473,134965290	Gene ID= ENSG00000112339.14 TPM= 1.93 Transcript Type= protein_coding
chr6	135285296	135497776	135285296	135497776	-	ENST00000265602.10@AHI1	ENST00000265602.10	protein_coding	135497583,135497188,135495814,135492228,135490623,135467581,135465814,135463125,135457494,135455734,135453341,135448290,135447008,135442582,135438375,135433027,135431208,135429882,135428629,135427167,135411348,135404951,135394776,135358132,135323162,135318519,135300500,135290423,135285296	135497776,135497249,135495898,135492291,135490747,135467634,135466373,135463306,135457713,135455926,135453436,135448475,135447160,135442714,135438498,135433256,135431314,135430000,135428759,135427307,135411544,135404977,135394896,135358187,135323324,135318616,135300558,135290525,135285647	Gene ID= ENSG00000135541.20 TPM= 1.93 Transcript Type= protein_coding
chr6	136261301	136289846	136261301	136289846	-	transcript4171.chr6.nic@BCLAF1	transcript4171.chr6.nic	protein_coding	136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136268162,136267029,136261301	136289846,136282687,136279876,136278776,136276508,136275701,136273187,136272079,136269612,136268339,136267175,136261477	Gene ID= ENSG00000029363.16 TPM= 3.68 Transcript Type= NA
chr6	136269264	136289846	136269264	136289846	-	transcript4173.chr6.nic@BCLAF1	transcript4173.chr6.nic	protein_coding	136289713,136282584,136279763,136277865,136275843,136275532,136273963,136273082,136271995,136269437,136269264	136289846,136282687,136279876,136278776,136276508,136275701,136274189,136273187,136272079,136269612,136269303	Gene ID= ENSG00000029363.16 TPM= 3.03 Transcript Type= NA
chr6	136271996	136289846	136271996	136289846	-	transcript4178.chr6.nic@BCLAF1	transcript4178.chr6.nic	protein_coding	136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271996	136289846,136282687,136279876,136278776,136275989,136275701,136273187,136272079	Gene ID= ENSG00000029363.16 TPM= 2.26 Transcript Type= NA
chr6	136269264	136289851	136269264	136289851	-	ENST00000628517.2@BCLAF1	ENST00000628517.2	protein_coding	136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136269264	136289851,136282687,136279876,136278776,136276508,136275701,136273187,136272079,136269612,136269303	Gene ID= ENSG00000029363.16 TPM= 3.87 Transcript Type= protein_coding
chr6	136258293	136259855	136258293	136259855	-	transcript4182.chr6.nnic@NA	transcript4182.chr6.nnic	NA	136258293	136259855	Gene ID= novel_gene_chr6_4183 TPM= 1.93 Transcript Type= NA
chr6	136666560	136793130	136666560	136793130	-	transcript4184.chr6.nic@MAP3K5	transcript4184.chr6.nic	protein_coding	136791710,136720450,136705110,136698489,136697219,136695951,136694140,136666560	136793130,136720589,136705133,136698682,136697387,136696057,136694310,136669395	Gene ID= ENSG00000197442.9 TPM= 2.9 Transcript Type= NA
chr6	136822585	136913937	136822585	136913937	+	ENST00000318471.4@PEX7	ENST00000318471.4	protein_coding	136822585,136825214,136826319,136845615,136846073,136866627,136869890,136872198,136898142,136913458	136822795,136825271,136826469,136845692,136846181,136866733,136870003,136872253,136898241,136913937	Gene ID= ENSG00000112357.12 TPM= 3.86 Transcript Type= protein_coding
chr6	137197484	137219449	137197484	137219449	-	ENST00000367739.8@IFNGR1	ENST00000367739.8	protein_coding	137219243,137206963,137206136,137204332,137203499,137200881,137197484	137219449,137207077,137206308,137204504,137203685,137201008,137198639	Gene ID= ENSG00000027697.13 TPM= 140.94 Transcript Type= protein_coding
chr6	138088505	138107511	138088505	138107511	-	ENST00000421351.3@PERP	ENST00000421351.3	protein_coding	138107127,138096354,138088505	138107511,138096494,138092268	Gene ID= ENSG00000112378.11 TPM= 8.69 Transcript Type= protein_coding
chr6	138404247	138413173	138404247	138413173	+	ENST00000367697.7@HEBP2	ENST00000367697.7	protein_coding	138404247,138405145,138405971,138412880	138404597,138405280,138406033,138413173	Gene ID= ENSG00000051620.10 TPM= 5.79 Transcript Type= protein_coding
chr6	138904870	138988352	138904870	138988352	-	transcript4218.chr6.nnic@REPS1	transcript4218.chr6.nnic	protein_coding	138987530,138947790,138945501,138945219,138944561,138943853,138943513,138941335,138929977,138921037,138920215,138917555,138915858,138914697,138912765,138911276,138908668,138907495,138904870	138988352,138947913,138945697,138945372,138944622,138944015,138943576,138941489,138930098,138921124,138920316,138917627,138915976,138914761,138912950,138911371,138908816,138907600,138905132	Gene ID= ENSG00000135597.18 TPM= 4.51 Transcript Type= NA
chr6	138904866	138988352	138904866	138988352	-	transcript4221.chr6.nic@REPS1	transcript4221.chr6.nic	protein_coding	138987530,138947790,138945501,138945219,138944498,138943853,138943513,138941335,138929977,138921037,138920215,138917555,138915858,138914697,138912765,138911276,138908668,138904866	138988352,138947913,138945697,138945372,138944622,138944015,138943576,138941489,138930098,138921124,138920316,138917627,138915976,138914761,138912950,138911371,138908816,138905132	Gene ID= ENSG00000135597.18 TPM= 4.99 Transcript Type= NA
chr6	138904870	138988261	138904870	138988261	-	ENST00000258062.9@REPS1	ENST00000258062.9	protein_coding	138987530,138947790,138945501,138945219,138944498,138943853,138943513,138941335,138929977,138926401,138921037,138920215,138917555,138915858,138914697,138912765,138911276,138908668,138907495,138904870	138988261,138947913,138945697,138945372,138944622,138944015,138943576,138941489,138930098,138926481,138921124,138920316,138917624,138915976,138914761,138912950,138911371,138908816,138907600,138905132	Gene ID= ENSG00000135597.18 TPM= 7.89 Transcript Type= protein_coding
chr6	139135112	139180802	139135112	139180802	+	ENST00000367658.2@HECA	ENST00000367658.2	protein_coding	139135112,139166284,139174385,139176941	139135667,139167324,139174539,139180802	Gene ID= ENSG00000112406.4 TPM= 61.78 Transcript Type= protein_coding
chr6	139247817	139291998	139247817	139291998	-	transcript4237.chr6.nic@TXLNB	transcript4237.chr6.nic	protein_coding	139291921,139288476,139276830,139270456,139262579,139260318,139255564,139247817	139291998,139288913,139276921,139270626,139262773,139260437,139255638,139247909	Gene ID= ENSG00000164440.14 TPM= 3.86 Transcript Type= NA
chr6	139240061	139292139	139240061	139292139	-	ENST00000358430.7@TXLNB	ENST00000358430.7	protein_coding	139291921,139288476,139276830,139270456,139262579,139260318,139255564,139247817,139244595,139240061	139292139,139288913,139276921,139270626,139262773,139260437,139255638,139247909,139244690,139243314	Gene ID= ENSG00000164440.14 TPM= 210.44 Transcript Type= protein_coding
chr6	142147162	142220946	142147162	142220946	+	ENST00000620996.4@VTA1	ENST00000620996.4	protein_coding	142147162,142166228,142169550,142170346,142189426,142198439,142218498	142147399,142166322,142169677,142170421,142189534,142198615,142220946	Gene ID= ENSG00000009844.15 TPM= 2.9 Transcript Type= protein_coding
chr6	142751478	142771318	142751478	142771318	-	transcript4260.chr6.nic@HIVEP2	transcript4260.chr6.nic	protein_coding	142769552,142768382,142764799,142761464,142759772,142751478	142771318,142768536,142764974,142761565,142760667,142753931	Gene ID= ENSG00000010818.9 TPM= 8.69 Transcript Type= NA
chr6	143060820	143335550	143060820	143335550	+	transcript4266.chr6.nic@AIG1	transcript4266.chr6.nic	protein_coding	143060820,143136835,143165082,143284110,143333282	143061066,143136990,143165183,143284225,143335550	Gene ID= ENSG00000146416.17 TPM= 1.93 Transcript Type= NA
chr6	143495490	143511737	143495490	143511737	-	transcript4279.chr6.nic@FUCA2	transcript4279.chr6.nic	protein_coding	143511411,143507237,143501932,143497389,143495490	143511737,143507424,143502122,143497497,143495847	Gene ID= ENSG00000001036.13 TPM= 4.83 Transcript Type= NA
chr6	143677965	143824121	143677965	143824121	+	ENST00000440869.6@PHACTR2	ENST00000440869.6	protein_coding	143677965,143712016,143748985,143753754,143760401,143765261,143772258,143774059,143777328,143783219,143788773,143807057,143823674	143678209,143712183,143749065,143753912,143760640,143765798,143772457,143774215,143777383,143783280,143788910,143807133,143824121	Gene ID= ENSG00000112419.14 TPM= 2.9 Transcript Type= protein_coding
chr6	143677970	143777383	143677970	143777383	+	transcript4293.chr6.nic@PHACTR2	transcript4293.chr6.nic	protein_coding	143677970,143712016,143748985,143753754,143765261,143772258,143774059,143777328	143678209,143712183,143749065,143753912,143765798,143772457,143774215,143777383	Gene ID= ENSG00000112419.14 TPM= 2.9 Transcript Type= NA
chr6	143843305	143863241	143843305	143863241	+	transcript4298.chr6.nic@LTV1	transcript4298.chr6.nic	protein_coding	143843305,143844486,143846051,143850131,143857303,143857752,143860426,143862104,143862844,143863086	143843480,143844617,143846224,143850218,143857444,143858007,143860553,143862243,143862896,143863241	Gene ID= ENSG00000135521.8 TPM= 2.9 Transcript Type= NA
chr6	143843305	143863812	143843305	143863812	+	transcript4299.chr6.nic@LTV1	transcript4299.chr6.nic	protein_coding	143843305,143844486,143846051,143850131,143857303,143860426,143862104,143862844,143863086,143863417	143843480,143844617,143846224,143850218,143858007,143860553,143862243,143862896,143863286,143863812	Gene ID= ENSG00000135521.8 TPM= 1.93 Transcript Type= NA
chr6	143843344	143863812	143843344	143863812	+	ENST00000367576.5@LTV1	ENST00000367576.5	protein_coding	143843344,143844486,143846051,143850131,143857303,143857752,143860426,143862104,143862844,143863086,143863417	143843480,143844617,143846224,143850218,143857444,143858007,143860553,143862243,143862896,143863286,143863812	Gene ID= ENSG00000135521.8 TPM= 75.29 Transcript Type= protein_coding
chr6	144094881	144095573	144094881	144095573	-	ENST00000367569.3@SF3B5	ENST00000367569.3	protein_coding	144094881	144095573	Gene ID= ENSG00000169976.6 TPM= 70.47 Transcript Type= protein_coding
chr6	145625304	145735855	145625304	145735855	-	ENST00000367519.8@EPM2A	ENST00000367519.8	protein_coding	145735198,145686122,145635245,145625304	145735855,145686296,145635486,145627693	Gene ID= ENSG00000112425.14 TPM= 100.39 Transcript Type= protein_coding
chr6	145625491	145735498	145625491	145735498	-	ENST00000638262.1@EPM2A	ENST00000638262.1	protein_coding	145735198,145686122,145625491	145735498,145686296,145627693	Gene ID= ENSG00000112425.14 TPM= 8.69 Transcript Type= protein_coding
chr6	145735059	145737216	145735059	145737216	+	transcript4335.chr6.nnic@NA	transcript4335.chr6.nnic	NA	145735059	145737216	Gene ID= novel_gene_chr6_4336 TPM= 4.83 Transcript Type= NA
chr6	145884807	145964389	145884807	145964389	-	ENST00000367505.6@SHPRH	ENST00000367505.6	protein_coding	145964157,145954690,145952349,145950264,145948272,145947493,145946233,145945381,145943143,145941623,145940723,145935278,145934907,145933057,145927189,145926204,145924739,145923643,145922663,145922286,145921167,145919348,145918131,145913478,145910448,145894885,145894150,145893215,145888020,145884807	145964389,145955354,145952478,145950482,145948350,145947643,145946341,145945637,145943802,145941874,145940801,145935441,145935163,145933178,145927277,145926296,145924846,145923785,145922836,145922348,145921392,145919491,145918232,145913549,145910636,145894977,145894236,145893393,145888100,145886787	Gene ID= ENSG00000146414.15 TPM= 2.9 Transcript Type= protein_coding
chr6	145943623	145964112	145943623	145964112	-	transcript4345.chr6.nic@SHPRH	transcript4345.chr6.nic	protein_coding	145963731,145954690,145952349,145950264,145948272,145947493,145946233,145945381,145943623	145964112,145955354,145952478,145950482,145948350,145947643,145946341,145945637,145943802	Gene ID= ENSG00000146414.15 TPM= 1.93 Transcript Type= NA
chr6	145943623	145964397	145943623	145964397	-	transcript4346.chr6.nic@SHPRH	transcript4346.chr6.nic	protein_coding	145964157,145954690,145952349,145950264,145948272,145947493,145946233,145945381,145943623	145964397,145955354,145952478,145950482,145948350,145947643,145946341,145945637,145943802	Gene ID= ENSG00000146414.15 TPM= 3.86 Transcript Type= NA
chr6	146543693	146554965	146543693	146554965	+	ENST00000367495.3@RAB32	ENST00000367495.3	protein_coding	146543693,146549464,146554456	146544121,146549741,146554965	Gene ID= ENSG00000118508.4 TPM= 7.72 Transcript Type= protein_coding
chr6	147203699	147363453	147203699	147363453	+	transcript4357.chr6.nic@STXBP5	transcript4357.chr6.nic	protein_coding	147203699,147205971,147235250,147239170,147260615,147262290,147267084,147278081,147291094,147310084,147311455,147313884,147314264,147314596,147315515,147316229,147324959,147327125,147334157,147339179,147339337,147353323,147359084,147363335	147204682,147206068,147235331,147239270,147260749,147262353,147267167,147278204,147291172,147310238,147311527,147314031,147314331,147314636,147315735,147316407,147325084,147327276,147334222,147339238,147339384,147353373,147359323,147363453	Gene ID= ENSG00000164506.14 TPM= 5.79 Transcript Type= NA
chr6	148342593	148552050	148342593	148552050	+	ENST00000367467.7@SASH1	ENST00000367467.7	protein_coding	148342593,148390134,148440184,148440358,148468545,148471417,148474110,148487614,148514324,148519547,148525291,148527453,148531526,148532797,148533771,148534751,148540443,148543680,148546015,148548295	148343223,148390262,148440234,148440407,148468585,148471503,148474222,148487715,148514456,148519893,148525365,148527596,148531661,148532966,148533980,148534901,148540556,148544818,148546146,148552050	Gene ID= ENSG00000111961.17 TPM= 6.76 Transcript Type= protein_coding
chr6	149317620	149411382	149317620	149411382	+	ENST00000637181.1@TAB2	ENST00000637181.1	protein_coding	149317620,149369909,149378018,149397604,149397969,149399104,149409577	149318015,149370099,149379518,149397764,149398062,149399184,149411382	Gene ID= ENSG00000055208.18 TPM= 3.86 Transcript Type= protein_coding
chr6	149497932	149500779	149497932	149500779	+	transcript4368.chr6.nnic@NA	transcript4368.chr6.nnic	NA	149497932	149500779	Gene ID= novel_gene_chr6_4369 TPM= 25.1 Transcript Type= NA
chr6	149504733	149546038	149504733	149546038	-	ENST00000253329.2@PPIL4	ENST00000253329.2	protein_coding	149545936,149541519,149541367,149540942,149535596,149534678,149533458,149526652,149525143,149521060,149517354,149512155,149504733	149546038,149541586,149541431,149541059,149535738,149534774,149533574,149526776,149525209,149521171,149517450,149512302,149505704	Gene ID= ENSG00000131013.3 TPM= 4.83 Transcript Type= protein_coding
chr6	149566405	149591748	149566405	149591748	+	transcript4383.chr6.nnic@GINM1	transcript4383.chr6.nnic	protein_coding	149566405,149572285,149572507,149579834,149580593,149582440,149590727	149566534,149572344,149572603,149579990,149580723,149582603,149591748	Gene ID= ENSG00000055211.12 TPM= 2.9 Transcript Type= NA
chr6	149566347	149591748	149566347	149591748	+	transcript4386.chr6.nnic@GINM1	transcript4386.chr6.nnic	protein_coding	149566347,149572285,149578822,149579834,149580593,149582440,149590727	149566534,149572344,149578973,149579990,149580723,149582603,149591748	Gene ID= ENSG00000055211.12 TPM= 3.86 Transcript Type= NA
chr6	149566364	149591748	149566364	149591748	+	transcript4389.chr6.nnic@GINM1	transcript4389.chr6.nnic	protein_coding	149566364,149572285,149579834,149580593,149582440,149590727	149566534,149572344,149579990,149580723,149582603,149591748	Gene ID= ENSG00000055211.12 TPM= 3.86 Transcript Type= NA
chr6	149566294	149591748	149566294	149591748	+	ENST00000367419.9@GINM1	ENST00000367419.9	protein_coding	149566294,149572285,149572507,149578822,149579834,149580593,149582440,149590727	149566534,149572344,149572603,149578973,149579990,149580723,149582603,149591748	Gene ID= ENSG00000055211.12 TPM= 29.92 Transcript Type= protein_coding
chr6	149594877	149648804	149594877	149648804	-	ENST00000367411.6@KATNA1	ENST00000367411.6	protein_coding	149648469,149638386,149632759,149623103,149604661,149603268,149601594,149598224,149597507,149597063,149594877	149648804,149638560,149632916,149623283,149604782,149603373,149601752,149598350,149597641,149597189,149595234	Gene ID= ENSG00000186625.13 TPM= 48.27 Transcript Type= protein_coding
chr6	149594873	149648715	149594873	149648715	-	transcript4395.chr6.nnic@KATNA1	transcript4395.chr6.nnic	protein_coding	149648469,149638386,149632759,149623103,149604661,149603268,149598224,149597507,149597063,149594873	149648715,149638560,149632916,149623283,149604782,149603373,149598350,149597641,149597189,149595234	Gene ID= ENSG00000186625.13 TPM= 2.9 Transcript Type= NA
chr6	149594873	149648774	149594873	149648774	-	transcript4396.chr6.nic@KATNA1	transcript4396.chr6.nic	protein_coding	149648469,149638386,149632759,149623103,149604661,149603268,149601594,149598224,149597507,149594873	149648774,149638560,149632916,149623283,149604782,149603373,149601752,149598350,149597641,149595234	Gene ID= ENSG00000186625.13 TPM= 2.9 Transcript Type= NA
chr6	149724320	149746535	149724320	149746535	-	transcript4401.chr6.nnic@NUP43	transcript4401.chr6.nnic	protein_coding	149746376,149745940,149743638,149742390,149738643,149736471,149731613,149725610,149724320	149746535,149746062,149743715,149742570,149738778,149736622,149731735,149727198,149724602	Gene ID= ENSG00000120253.13 TPM= 6.76 Transcript Type= NA
chr6	149725591	149746535	149725591	149746535	-	transcript4404.chr6.nnic@NUP43	transcript4404.chr6.nnic	protein_coding	149746376,149745940,149743638,149742390,149738643,149736471,149731613,149730686,149725591	149746535,149746062,149743715,149742570,149738778,149736622,149731735,149730763,149727198	Gene ID= ENSG00000120253.13 TPM= 5.79 Transcript Type= NA
chr6	149724315	149746572	149724315	149746572	-	ENST00000340413.6@NUP43	ENST00000340413.6	protein_coding	149746376,149745940,149743638,149742390,149738643,149736471,149731613,149724315	149746572,149746062,149743715,149742570,149738778,149736622,149731735,149727198	Gene ID= ENSG00000120253.13 TPM= 7.72 Transcript Type= protein_coding
chr6	149749444	149811420	149749444	149811420	+	ENST00000464889.5@PCMT1	ENST00000464889.5	protein_coding	149749444,149771162,149773138,149789954,149793549,149796415,149802200,149810616	149749956,149771266,149773169,149790058,149793669,149796500,149802416,149811420	Gene ID= ENSG00000120265.16 TPM= 177.62 Transcript Type= protein_coding
chr6	149825658	149864352	149825658	149864352	-	transcript4417.chr6.nic@LRP11	transcript4417.chr6.nic	protein_coding	149863408,149853003,149842983,149837338,149836085,149825658	149864352,149853160,149843124,149837463,149836297,149826359	Gene ID= ENSG00000120256.9 TPM= 2.9 Transcript Type= NA
chr6	149863394	149865420	149863394	149865420	+	transcript4428.chr6.nnic@NA	transcript4428.chr6.nnic	NA	149863394	149865420	Gene ID= novel_gene_chr6_4429 TPM= 1.93 Transcript Type= NA
chr6	149883360	149895940	149883360	149895940	-	transcript4422.chr6.nnic@RAET1E	transcript4422.chr6.nnic	protein_coding	149895846,149890817,149889885,149889348,149888539,149883360	149895940,149891034,149890145,149889623,149888667,149884504	Gene ID= ENSG00000164520.11 TPM= 2.9 Transcript Type= NA
chr6	150143076	150250357	150143076	150250357	+	ENST00000361131.4@PPP1R14C	ENST00000361131.4	protein_coding	150143076,150214744,150216824,150248746	150143498,150214827,150216856,150250357	Gene ID= ENSG00000198729.4 TPM= 65.64 Transcript Type= protein_coding
chr6	150327022	150352716	150327022	150352716	+	transcript4434.chr6.nnic@NA	transcript4434.chr6.nnic	NA	150327022,150336220,150339768,150340602,150345522,150347684,150351532	150327115,150336413,150339826,150340719,150345633,150347980,150352716	Gene ID= novel_gene_chr6_4435 TPM= 1.93 Transcript Type= NA
chr6	150721088	150843665	150721088	150843665	+	ENST00000358517.6@PLEKHG1	ENST00000358517.6	protein_coding	150721088,150733584,150768638,150786390,150795856,150800719,150804610,150809105,150809381,150809648,150818183,150819679,150821195,150823654,150830582,150839833	150721200,150734092,150768738,150786459,150795902,150800869,150804741,150809287,150809476,150809734,150818216,150819774,150821233,150823676,150832205,150843665	Gene ID= ENSG00000120278.15 TPM= 2.9 Transcript Type= protein_coding
chr6	151239999	151358557	151239999	151358557	+	ENST00000402676.6@AKAP12	ENST00000402676.6	protein_coding	151239999,151240384,151305747,151348711,151355727	151240059,151240724,151305903,151353752,151358557	Gene ID= ENSG00000131016.16 TPM= 3.86 Transcript Type= protein_coding
chr6	151364117	151391008	151364117	151391008	-	transcript4444.chr6.nnic@ZBTB2	transcript4444.chr6.nnic	protein_coding	151390880,151373465,151364117	151391008,151373649,151366892	Gene ID= ENSG00000181472.4 TPM= 2.9 Transcript Type= NA
chr6	151364121	151391658	151364121	151391658	-	transcript4448.chr6.nnic@ZBTB2	transcript4448.chr6.nnic	protein_coding	151391420,151364121	151391658,151366892	Gene ID= ENSG00000181472.4 TPM= 5.79 Transcript Type= NA
chr6	151364117	151391548	151364117	151391548	-	ENST00000325144.4@ZBTB2	ENST00000325144.4	protein_coding	151391420,151373465,151364117	151391548,151373649,151366892	Gene ID= ENSG00000181472.4 TPM= 14.48 Transcript Type= protein_coding
chr6	151404854	151452124	151404854	151452124	-	ENST00000367303.8@RMND1	ENST00000367303.8	protein_coding	151452016,151445308,151436446,151433155,151430138,151427482,151423525,151422541,151421245,151417279,151405720,151404854	151452124,151445825,151436554,151433230,151430177,151427582,151423631,151422605,151421321,151417399,151405836,151405267	Gene ID= ENSG00000155906.16 TPM= 9.65 Transcript Type= protein_coding
chr6	151452287	151470101	151452287	151470101	+	ENST00000367294.3@ARMT1	ENST00000367294.3	protein_coding	151452287,151454548,151458328,151464453,151468343	151452586,151454653,151458572,151464618,151470101	Gene ID= ENSG00000146476.10 TPM= 37.65 Transcript Type= protein_coding
chr6	152988516	153002752	152988516	153002752	-	transcript4468.chr6.nic@MTRF1L	transcript4468.chr6.nic	protein_coding	153002427,152998550,152995136,152994513,152992857,152991185,152988516	153002752,152998629,152995294,152994676,152992974,152991416,152990095	Gene ID= ENSG00000112031.15 TPM= 2.9 Transcript Type= NA
chr6	154387504	154510659	154387504	154510659	-	ENST00000607772.5@CNKSR3	ENST00000607772.5	protein_coding	154510063,154450095,154442088,154441292,154433466,154430472,154428128,154422915,154422506,154414299,154410934,154410343,154387504	154510659,154450258,154442290,154441379,154433507,154430591,154428187,154422983,154422652,154414423,154411142,154410432,154406652	Gene ID= ENSG00000153721.18 TPM= 2.9 Transcript Type= protein_coding
chr6	154733475	154843334	154733475	154843334	+	transcript4477.chr6.nnic@SCAF8	transcript4477.chr6.nnic	protein_coding	154733475,154741956,154773989,154778001,154787861,154792823,154795009,154801971,154803544,154805369,154808070,154808686,154810015,154815716,154818479,154820177,154822276,154824234,154827172,154830922,154831939,154841237	154733930,154742018,154774072,154778045,154788022,154792976,154795139,154802147,154803623,154805486,154808201,154808798,154810208,154815816,154818592,154820333,154822409,154824378,154827240,154831140,154833409,154843334	Gene ID= ENSG00000213079.9 TPM= 3.7 Transcript Type= NA
chr6	154733416	154834060	154733416	154834060	+	transcript4478.chr6.nic@SCAF8	transcript4478.chr6.nic	protein_coding	154733416,154741956,154773989,154778001,154787861,154792823,154795009,154801971,154803544,154805369,154808070,154808686,154810015,154815716,154818479,154820177,154822276,154824234,154827172,154830922,154831939	154733930,154742018,154774072,154778045,154788022,154792976,154795139,154802147,154803623,154805486,154808201,154808798,154810208,154815816,154818592,154820333,154822409,154824378,154827240,154831140,154834060	Gene ID= ENSG00000213079.9 TPM= 7.56 Transcript Type= NA
chr6	154733325	154834060	154733325	154834060	+	ENST00000367178.7@SCAF8	ENST00000367178.7	protein_coding	154733325,154773989,154778001,154787861,154792823,154795009,154801971,154803544,154805369,154808070,154808686,154810015,154815716,154818479,154820177,154822276,154824234,154827172,154830922,154831939	154733930,154774072,154778045,154788022,154792976,154795139,154802147,154803623,154805486,154808201,154808798,154810208,154815816,154818592,154820333,154822409,154824378,154827240,154831140,154834060	Gene ID= ENSG00000213079.9 TPM= 11.9 Transcript Type= protein_coding
chr6	157381133	157678146	157381133	157678146	+	ENST00000359775.9@ZDHHC14	ENST00000359775.9	protein_coding	157381133,157542585,157592988,157628349,157632834,157645737,157647259,157653525,157672724	157382266,157542745,157593146,157628486,157632882,157645839,157647368,157653627,157678146	Gene ID= ENSG00000175048.16 TPM= 1.93 Transcript Type= protein_coding
chr6	157381133	157673945	157381133	157673945	+	ENST00000414563.6@ZDHHC14	ENST00000414563.6	protein_coding	157381133,157542585,157592988,157628349,157632834,157645737,157647259,157653525,157672769	157382266,157542745,157593146,157628486,157632882,157645839,157647368,157653627,157673945	Gene ID= ENSG00000175048.16 TPM= 4.83 Transcript Type= protein_coding
chr6	157542348	157543689	157542348	157543689	+	transcript4517.chr6.nnic@ZDHHC14	transcript4517.chr6.nnic	protein_coding	157542348,157542585,157543564	157542426,157542745,157543689	Gene ID= ENSG00000175048.16 TPM= 1.93 Transcript Type= NA
chr6	157823029	157944536	157823029	157944536	+	transcript4529.chr6.nnic@SNX9	transcript4529.chr6.nnic	protein_coding	157823029,157867547,157873102,157875051,157888571,157896827,157901898,157906128,157909665,157909908,157921531,157927111,157928599,157932195,157935964,157937434,157938633,157940883,157942791	157823446,157867633,157873176,157875176,157888660,157896998,157902045,157906212,157909790,157910025,157921661,157927214,157928702,157932272,157936040,157937523,157938747,157940974,157944536	Gene ID= ENSG00000130340.15 TPM= 36.04 Transcript Type= NA
chr6	158043210	158067454	158043210	158067454	+	transcript4546.chr6.nnic@SYNJ2	transcript4546.chr6.nnic	protein_coding	158043210,158054967,158059257,158061992,158063791,158064601,158066444	158043399,158055028,158059353,158062164,158063872,158064750,158067454	Gene ID= ENSG00000078269.14 TPM= 1.93 Transcript Type= NA
chr6	158038920	158041749	158038920	158041749	-	transcript4549.chr6.nnic@NA	transcript4549.chr6.nnic	NA	158038920	158041749	Gene ID= novel_gene_chr6_4550 TPM= 1.93 Transcript Type= NA
chr6	158042846	158043799	158042846	158043799	-	transcript4551.chr6.nnic@NA	transcript4551.chr6.nnic	NA	158042846	158043799	Gene ID= novel_gene_chr6_4552 TPM= 2.9 Transcript Type= NA
chr6	158109515	158168270	158109515	158168270	-	ENST00000367104.7@SERAC1	ENST00000367104.7	protein_coding	158168140,158158273,158155315,158150453,158148865,158146782,158144299,158143056,158130373,158128108,158120425,158119029,158117727,158116185,158114789,158113449,158109515	158168270,158158364,158155351,158150589,158148954,158146913,158144420,158143184,158130486,158128270,158120575,158119170,158117821,158116282,158114971,158113592,158111502	Gene ID= ENSG00000122335.13 TPM= 6.76 Transcript Type= protein_coding
chr6	158168350	158192415	158168350	158192415	+	transcript4563.chr6.nnic@GTF2H5	transcript4563.chr6.nnic	protein_coding	158168350,158191977	158168395,158192415	Gene ID= ENSG00000272047.1 TPM= 4.83 Transcript Type= NA
chr6	158560061	158635428	158560061	158635428	+	transcript4572.chr6.nnic@TMEM181	transcript4572.chr6.nnic	protein_coding	158560061,158573420,158580940,158583954,158585304,158589672,158605267,158607244,158608333,158608659,158623550,158625104,158625703,158628408,158629730,158631323,158631810	158560232,158573523,158580995,158584044,158585425,158589782,158605347,158607343,158608463,158608750,158623607,158625206,158625754,158628490,158629819,158631389,158635428	Gene ID= ENSG00000146433.8 TPM= 16.41 Transcript Type= NA
chr6	158636474	158644767	158636474	158644767	-	transcript4578.chr6.nic@DYNLT1	transcript4578.chr6.nic	protein_coding	158644682,158641319,158637128,158636474	158644767,158641360,158637894,158636897	Gene ID= ENSG00000146425.10 TPM= 1.93 Transcript Type= NA
chr6	158636474	158644739	158636474	158644739	-	ENST00000367089.7@DYNLT1	ENST00000367089.7	protein_coding	158644682,158641319,158637771,158637128,158636474	158644739,158641360,158637894,158637205,158636897	Gene ID= ENSG00000146425.10 TPM= 92.67 Transcript Type= protein_coding
chr6	158643476	158644740	158643476	158644740	-	transcript4579.chr6.nnic@NA	transcript4579.chr6.nnic	NA	158643476	158644740	Gene ID= novel_gene_chr6_4580 TPM= 1.93 Transcript Type= NA
chr6	158765744	158819394	158765744	158819394	-	transcript4584.chr6.nnic@EZR	transcript4584.chr6.nnic	protein_coding	158819317,158818082,158789288,158787108,158785309,158784644,158783520,158776408,158771244,158770764,158769784,158769326,158767261,158765744	158819394,158818166,158789371,158787203,158785583,158784727,158783666,158776504,158771407,158770894,158769944,158769418,158767512,158767137	Gene ID= ENSG00000092820.17 TPM= 3.21 Transcript Type= NA
chr6	158765748	158819412	158765748	158819412	-	ENST00000367075.3@EZR	ENST00000367075.3	protein_coding	158819317,158818082,158789288,158787108,158785309,158784644,158783520,158776408,158771244,158770764,158769784,158769326,158767261,158765748	158819412,158818166,158789371,158787203,158785583,158784727,158783666,158776504,158771407,158770894,158769944,158769418,158767512,158767078	Gene ID= ENSG00000092820.17 TPM= 49.55 Transcript Type= protein_coding
chr6	158765741	158818227	158765741	158818227	-	ENST00000337147.11@EZR	ENST00000337147.11	protein_coding	158818082,158789288,158787108,158785309,158784644,158783520,158776408,158771244,158770764,158769784,158769326,158767261,158765741	158818227,158789371,158787203,158785583,158784727,158783666,158776504,158771407,158770894,158769944,158769418,158767512,158767078	Gene ID= ENSG00000092820.17 TPM= 11.9 Transcript Type= protein_coding
chr6	158977236	159000166	158977236	159000166	-	ENST00000252655.1@RSPH3	ENST00000252655.1	protein_coding	158999435,158993839,158986280,158983662,158982485,158980774,158978260,158977236	159000166,158993926,158986421,158983807,158982688,158980936,158978346,158977848	Gene ID= ENSG00000130363.11 TPM= 1.93 Transcript Type= protein_coding
chr6	159679064	159693234	159679064	159693234	-	ENST00000367055.8@SOD2	ENST00000367055.8	protein_coding	159693145,159692661,159688126,159684854,159682474,159679064	159693234,159692863,159688242,159685033,159682638,159679298	Gene ID= ENSG00000112096.16 TPM= 19.68 Transcript Type= protein_coding
chr6	159679116	159693228	159679116	159693228	-	ENST00000367054.6@SOD2	ENST00000367054.6	protein_coding	159693145,159692661,159684854,159682474,159679116	159693228,159692863,159685033,159682638,159679298	Gene ID= ENSG00000112096.16 TPM= 13.98 Transcript Type= protein_coding
chr6	159682165	159693278	159682165	159693278	-	ENST00000337404.8@SOD2	ENST00000337404.8	protein_coding	159693145,159692661,159684854,159682165	159693278,159692863,159685033,159682638	Gene ID= ENSG00000112096.16 TPM= 5.93 Transcript Type= protein_coding
chr6	159690919	159693244	159690919	159693244	-	ENST00000452684.2@SOD2	ENST00000452684.2	protein_coding	159693145,159690919	159693244,159692863	Gene ID= ENSG00000112096.16 TPM= 1.93 Transcript Type= protein_coding
chr6	159725585	159756319	159725585	159756319	+	ENST00000358372.8@WTAP	ENST00000358372.8	protein_coding	159725585,159736258,159738990,159742088,159743665,159748191,159753460,159755028	159727333,159736295,159739045,159742146,159743792,159748369,159753614,159756319	Gene ID= ENSG00000146457.14 TPM= 35.91 Transcript Type= protein_coding
chr6	159727008	159749415	159727008	159749415	+	transcript4732.chr6.nic@WTAP	transcript4732.chr6.nic	protein_coding	159727008,159736258,159738990,159742088,159743665,159748191	159727333,159736295,159739045,159742146,159743792,159749415	Gene ID= ENSG00000146457.14 TPM= 71.87 Transcript Type= NA
chr6	159727500	159756317	159727500	159756317	+	ENST00000621533.4@WTAP	ENST00000621533.4	protein_coding	159727500,159736258,159738990,159742088,159743665,159748191,159753460,159755028	159727703,159736295,159739045,159742146,159743792,159748369,159753614,159756317	Gene ID= ENSG00000146457.14 TPM= 20.46 Transcript Type= protein_coding
chr6	159727566	159749421	159727566	159749421	+	ENST00000631126.2@WTAP	ENST00000631126.2	protein_coding	159727566,159736258,159738990,159742088,159743665,159748191,159748590	159727703,159736295,159739045,159742146,159743792,159748369,159749421	Gene ID= ENSG00000146457.14 TPM= 32.29 Transcript Type= protein_coding
chr6	159727588	159749415	159727588	159749415	+	ENST00000337387.4@WTAP	ENST00000337387.4	protein_coding	159727588,159736258,159738990,159742088,159743665,159748191	159727703,159736295,159739045,159742146,159743792,159749415	Gene ID= ENSG00000146457.14 TPM= 81.52 Transcript Type= protein_coding
chr6	159760328	159779055	159760328	159779055	+	ENST00000367048.4@ACAT2	ENST00000367048.4	protein_coding	159760328,159762919,159767005,159768511,159775170,159776150,159777302,159778170,159778659	159762142,159763053,159767186,159768628,159775313,159776272,159777456,159778280,159779055	Gene ID= ENSG00000120437.8 TPM= 5.79 Transcript Type= protein_coding
chr6	159778498	159789749	159778498	159789749	-	ENST00000321394.11@TCP1	ENST00000321394.11	protein_coding	159789405,159788058,159787743,159785900,159785386,159784666,159783941,159780935,159780443,159779895,159779627,159778498	159789749,159788143,159787871,159785997,159785496,159784847,159784067,159781110,159780566,159780087,159779790,159779261	Gene ID= ENSG00000120438.11 TPM= 90.74 Transcript Type= protein_coding
chr6	159789900	159798429	159789900	159798429	+	transcript4756.chr6.nnic@MRPL18	transcript4756.chr6.nnic	protein_coding	159789900,159790940,159797287,159798052	159790060,159791126,159797369,159798429	Gene ID= ENSG00000112110.9 TPM= 3.86 Transcript Type= NA
chr6	159789846	159798436	159789846	159798436	+	transcript4757.chr6.nnic@MRPL18	transcript4757.chr6.nnic	protein_coding	159789846,159790940,159797287,159798052	159790060,159791126,159797518,159798436	Gene ID= ENSG00000112110.9 TPM= 16.41 Transcript Type= NA
chr6	159790469	159798427	159790469	159798427	+	transcript4759.chr6.nnic@MRPL18	transcript4759.chr6.nnic	protein_coding	159790469,159790940,159797287,159798052	159790639,159791126,159797347,159798427	Gene ID= ENSG00000112110.9 TPM= 1.93 Transcript Type= NA
chr6	159790466	159798436	159790466	159798436	+	ENST00000367034.4@MRPL18	ENST00000367034.4	protein_coding	159790466,159790940,159797287,159798052	159790639,159791126,159797518,159798436	Gene ID= ENSG00000112110.9 TPM= 40.54 Transcript Type= protein_coding
chr6	159969032	160046534	159969032	160046534	+	transcript4767.chr6.nic@IGF2R	transcript4767.chr6.nic	protein_coding	159969032,159991184,160009010,160010687,160024572,160027185,160029550,160032551,160032942,160034419,160040560,160043148,160044514,160045745,160046498	159969395,159991323,160009134,160010785,160024704,160027314,160029655,160032713,160033107,160034522,160040724,160043288,160044657,160045882,160046534	Gene ID= ENSG00000197081.12 TPM= 7.72 Transcript Type= NA
chr6	160348268	160452581	160348268	160452581	+	ENST00000275300.2@SLC22A3	ENST00000275300.2	protein_coding	160348268,160397979,160407041,160408753,160410729,160436780,160436997,160442761,160443630,160447719,160450996	160348848,160398082,160407195,160408921,160410846,160436877,160437211,160442869,160443742,160447818,160452581	Gene ID= ENSG00000146477.5 TPM= 23 Transcript Type= protein_coding
chr6	160348377	160452581	160348377	160452581	+	transcript4775.chr6.nnic@SLC22A3	transcript4775.chr6.nnic	protein_coding	160348377,160397979,160407041,160408753,160410729,160442761,160443630,160447719,160450996	160348848,160398082,160407195,160408921,160410846,160442869,160443742,160447818,160452581	Gene ID= ENSG00000146477.5 TPM= 6.59 Transcript Type= NA
chr6	160348306	160440198	160348306	160440198	+	transcript4778.chr6.nic@SLC22A3	transcript4778.chr6.nic	protein_coding	160348306,160397979,160407041,160408753,160410729,160436780,160436997	160348848,160398082,160407195,160408921,160410846,160436877,160440198	Gene ID= ENSG00000146477.5 TPM= 3.21 Transcript Type= NA
chr6	160348463	160398569	160348463	160398569	+	transcript4781.chr6.nnic@SLC22A3	transcript4781.chr6.nnic	protein_coding	160348463,160397979,160398293	160348848,160398082,160398569	Gene ID= ENSG00000146477.5 TPM= 4.83 Transcript Type= NA
chr6	160349589	160356036	160349589	160356036	+	transcript4782.chr6.nnic@SLC22A3	transcript4782.chr6.nnic	protein_coding	160349589,160352609	160350670,160356036	Gene ID= ENSG00000146477.5 TPM= 1.93 Transcript Type= NA
chr6	160991727	161117385	160991727	161117385	+	ENST00000366919.6@MAP3K4	ENST00000366919.6	protein_coding	160991727,161034259,161048616,161070608,161073466,161080881,161084501,161086379,161086584,161087688,161089322,161091379,161092010,161092978,161093773,161097080,161101892,161102699,161106514,161107899,161108743,161109755,161111836,161112668,161115123,161116850	160992083,161034449,161049979,161070850,161073612,161081038,161084617,161086478,161086667,161087954,161089471,161091540,161092143,161093056,161093851,161097176,161101992,161102779,161106705,161107969,161108859,161109914,161111958,161112774,161115302,161117385	Gene ID= ENSG00000085511.19 TPM= 13.51 Transcript Type= protein_coding
chr6	163413065	163413960	163413065	163413960	-	ENST00000604200.1@CAHM	ENST00000604200.1	lincRNA	163413065	163413960	Gene ID= ENSG00000270419.1 TPM= 2.9 Transcript Type= lincRNA
chr6	163414000	163573800	163414000	163573800	+	ENST00000361758.8@QKI	ENST00000361758.8	protein_coding	163414000,163455279,163478780,163534982,163561982,163563420,163565946,163570694	163415335,163455421,163478896,163535125,163562069,163563719,163566795,163573800	Gene ID= ENSG00000112531.16 TPM= 59.83 Transcript Type= nonsense_mediated_decay
chr6	163414380	163570145	163414380	163570145	+	transcript4826.chr6.nic@QKI	transcript4826.chr6.nic	protein_coding	163414380,163455279,163478780,163534982,163561982,163563444,163565946	163415335,163455421,163478896,163535125,163562069,163563719,163570145	Gene ID= ENSG00000112531.16 TPM= 19.61 Transcript Type= NA
chr6	163414643	163570145	163414643	163570145	+	ENST00000453779.6@QKI	ENST00000453779.6	protein_coding	163414643,163455279,163478780,163534982,163561982,163563420,163565946	163415335,163455421,163478896,163535125,163562069,163563719,163570145	Gene ID= ENSG00000112531.16 TPM= 41.49 Transcript Type= protein_coding
chr6	163414643	163570145	163414643	163570145	+	ENST00000275262.11@QKI	ENST00000275262.11	protein_coding	163414643,163455279,163478780,163534982,163561982,163563420,163564667	163415335,163455421,163478896,163535125,163562069,163563719,163570145	Gene ID= ENSG00000112531.16 TPM= 17.36 Transcript Type= protein_coding
chr6	163414772	163416929	163414772	163416929	+	transcript4848.chr6.nnic@NA	transcript4848.chr6.nnic	NA	163414772	163416929	Gene ID= novel_gene_chr6_4849 TPM= 4.83 Transcript Type= NA
chr6	163420156	163421462	163420156	163421462	-	transcript4858.chr6.nnic@NA	transcript4858.chr6.nnic	NA	163420156	163421462	Gene ID= novel_gene_chr6_4859 TPM= 1.93 Transcript Type= NA
chr6	163424643	163427234	163424643	163427234	-	transcript4854.chr6.nnic@NA	transcript4854.chr6.nnic	NA	163424643	163427234	Gene ID= novel_gene_chr6_4855 TPM= 4.83 Transcript Type= NA
chr6	163572251	163576676	163572251	163576676	+	transcript4846.chr6.nnic@NA	transcript4846.chr6.nnic	NA	163572251	163576676	Gene ID= novel_gene_chr6_4847 TPM= 7.72 Transcript Type= NA
chr6	163970765	163972783	163970765	163972783	-	transcript4862.chr6.nnic@NA	transcript4862.chr6.nnic	NA	163970765	163972783	Gene ID= novel_gene_chr6_4863 TPM= 2.9 Transcript Type= NA
chr6	164108356	164110262	164108356	164110262	+	transcript4866.chr6.nnic@NA	transcript4866.chr6.nnic	NA	164108356	164110262	Gene ID= novel_gene_chr6_4867 TPM= 1.93 Transcript Type= NA
chr6	166331780	166342591	166331780	166342591	-	transcript4882.chr6.nnic@SFT2D1	transcript4882.chr6.nnic	protein_coding	166342419,166331780	166342591,166332045	Gene ID= ENSG00000198818.9 TPM= 5.79 Transcript Type= NA
chr6	166319728	166342591	166319728	166342591	-	ENST00000361731.3@SFT2D1	ENST00000361731.3	protein_coding	166342419,166330161,166329507,166328276,166326132,166324537,166322857,166319728	166342591,166330247,166329589,166328357,166326167,166324595,166322886,166320256	Gene ID= ENSG00000198818.9 TPM= 28.96 Transcript Type= protein_coding
chr6	166364919	166383013	166364919	166383013	-	ENST00000341756.10@MPC1	ENST00000341756.10	protein_coding	166382806,166366795,166365974,166364919	166383013,166366894,166366106,166365453	Gene ID= ENSG00000060762.18 TPM= 134.18 Transcript Type= protein_coding
chr6	166411232	166561815	166411232	166561815	-	transcript4890.chr6.nnic@RPS6KA2	transcript4890.chr6.nnic	protein_coding	166561587,166538668,166531232,166510277,166508203,166504506,166500887,166498508,166490671,166488833,166469841,166459449,166451103,166448724,166432401,166430453,166423256,166419882,166418225,166413794,166411232	166561815,166538784,166531313,166510357,166508282,166504612,166500924,166498650,166490741,166488921,166469905,166459551,166451233,166448849,166432490,166430611,166423417,166419958,166418342,166413931,166412887	Gene ID= ENSG00000071242.11 TPM= 3.86 Transcript Type= NA
chr6	166411232	166692987	166411232	166692987	-	transcript4892.chr6.nnic@RPS6KA2	transcript4892.chr6.nnic	protein_coding	166692793,166538668,166531232,166510277,166508203,166504506,166500887,166498508,166490671,166488833,166469841,166459449,166451103,166448724,166432401,166430453,166423256,166419882,166418225,166413794,166411232	166692987,166538784,166531313,166510357,166508282,166504612,166500924,166498650,166490741,166488921,166469905,166459551,166451233,166448849,166432490,166430611,166423417,166419958,166418342,166413931,166412887	Gene ID= ENSG00000071242.11 TPM= 2.9 Transcript Type= NA
chr6	166929504	166956702	166929504	166956702	-	ENST00000508775.5@RNASET2	ENST00000508775.5	protein_coding	166956097,166952488,166948570,166946682,166943019,166938895,166934091,166931044,166929504	166956702,166952548,166948625,166946739,166943089,166939008,166934136,166931118,166929791	Gene ID= ENSG00000026297.15 TPM= 8.69 Transcript Type= protein_coding
chr6	166999397	167042416	166999397	167042416	+	transcript4907.chr6.nnic@FGFR1OP	transcript4907.chr6.nnic	protein_coding	166999397,167000060,167010813,167022409,167024782,167026547,167032603,167033875,167039904	166999514,167000113,167010893,167022635,167024894,167026615,167032642,167033971,167042416	Gene ID= ENSG00000213066.11 TPM= 1.93 Transcript Type= NA
chr6	167826869	167923207	167826869	167923207	+	transcript4909.chr6.nic@AFDN	transcript4909.chr6.nic	protein_coding	167826869,167864551,167870386,167872214,167875335,167880360,167889215,167890862,167896878,167898205,167902317,167907171,167911101,167911284,167913403,167914168,167914644,167915168,167917089,167918735,167922856	167827237,167864746,167870498,167872377,167875495,167880517,167889326,167891029,167896972,167898467,167902386,167907289,167911162,167911489,167913423,167914313,167914738,167915433,167917232,167918933,167923207	Gene ID= ENSG00000130396.20 TPM= 3.86 Transcript Type= NA
chr6	168441151	168667994	168441151	168667994	+	ENST00000356284.6@SMOC2	ENST00000356284.6	protein_coding	168441151,168509915,168526346,168527628,168543625,168547119,168549129,168598818,168608157,168650681,168652954,168664074,168666421	168441454,168510086,168526452,168527727,168543672,168547169,168549203,168599004,168608239,168650783,168653228,168664111,168667994	Gene ID= ENSG00000112562.18 TPM= 14.48 Transcript Type= protein_coding
chr6	169215780	169254044	169215780	169254044	-	ENST00000366787.7@THBS2	ENST00000366787.7	protein_coding	169253990,169253724,169250733,169248417,169246197,169241762,169240452,169239599,169237625,169237170,169234734,169232890,169232664,169231980,169229572,169228122,169226180,169225145,169223248,169222197,169221430,169220198,169215780	169254044,169253896,169250806,169248973,169246281,169241958,169240592,169239695,169237795,169237346,169234907,169233017,169232816,169232198,169229679,169228281,169226298,169225379,169223475,169222468,169221527,169220337,169217829	Gene ID= ENSG00000186340.14 TPM= 1.93 Transcript Type= protein_coding
chr6	169452105	169452469	169452105	169452469	-	transcript4922.chr6.nnic@NA	transcript4922.chr6.nnic	NA	169452105	169452469	Gene ID= novel_gene_chr6_4923 TPM= 2.9 Transcript Type= NA
chr6	169702139	169710853	169702139	169710853	+	transcript4932.chr6.nnic@C6orf120	transcript4932.chr6.nnic	protein_coding	169702139,169710839	169704864,169710853	Gene ID= ENSG00000185127.6 TPM= 1.93 Transcript Type= NA
chr6	169702190	169704856	169702190	169704856	+	ENST00000332290.3@C6orf120	ENST00000332290.3	protein_coding	169702190	169704856	Gene ID= ENSG00000185127.6 TPM= 24.13 Transcript Type= protein_coding
chr6	169703905	169724035	169703905	169724035	-	transcript4925.chr6.nnic@PHF10	transcript4925.chr6.nnic	protein_coding	169723845,169718788,169717823,169715955,169715708,169714733,169712386,169710236,169705616,169705133,169703905	169724035,169718918,169717906,169716088,169715857,169714842,169712539,169710391,169705724,169705321,169704088	Gene ID= ENSG00000130024.14 TPM= 3.86 Transcript Type= NA
chr6	169715994	169724018	169715994	169724018	-	transcript4929.chr6.nic@PHF10	transcript4929.chr6.nic	protein_coding	169723845,169721005,169718788,169717823,169715994	169724018,169721111,169718918,169717906,169716088	Gene ID= ENSG00000130024.14 TPM= 1.93 Transcript Type= NA
chr6	169707028	169724005	169707028	169724005	-	ENST00000612128.1@PHF10	ENST00000612128.1	protein_coding	169723845,169721005,169718788,169717823,169715955,169715708,169714733,169712386,169707028	169724005,169721111,169718918,169717906,169716088,169715857,169714842,169712539,169710391	Gene ID= ENSG00000130024.14 TPM= 35.72 Transcript Type= protein_coding
chr6	169724081	169726093	169724081	169726093	+	transcript4943.chr6.nnic@NA	transcript4943.chr6.nnic	NA	169724081	169726093	Gene ID= novel_gene_chr6_4944 TPM= 6.76 Transcript Type= NA
chr6	169749510	169751587	169749510	169751587	-	ENST00000628156.1@TCTE3	ENST00000628156.1	protein_coding	169749510	169751587	Gene ID= ENSG00000184786.5 TPM= 1.93 Transcript Type= processed_transcript
chr6	169751625	169781584	169751625	169781584	+	ENST00000366773.7@ERMARD	ENST00000366773.7	protein_coding	169751625,169753864,169755283,169756338,169756719,169758968,169759838,169760642,169762429,169766638,169768103,169769540,169773319,169775270,169775940,169776455,169779182,169781330	169751663,169754032,169755422,169756439,169756808,169759065,169759974,169760756,169762531,169766667,169768171,169769713,169773402,169775346,169776065,169776673,169779295,169781584	Gene ID= ENSG00000130023.15 TPM= 3.86 Transcript Type= protein_coding
chr6	170141364	170144211	170141364	170144211	+	transcript4957.chr6.nnic@NA	transcript4957.chr6.nnic	NA	170141364	170144211	Gene ID= novel_gene_chr6_4958 TPM= 1.93 Transcript Type= NA
chr6	170285471	170290929	170285471	170290929	-	transcript4961.chr6.nic@DLL1	transcript4961.chr6.nic	protein_coding	170290086,170289512,170288729,170288239,170286238,170285471	170290929,170289808,170288789,170288496,170286298,170285699	Gene ID= ENSG00000198719.8 TPM= 1.93 Transcript Type= NA
chr6	170306756	170407065	170306756	170407065	+	ENST00000476287.3@FAM120B	ENST00000476287.3	protein_coding	170306756,170317370,170323079,170330449,170348151,170358226,170388287,170391013,170395487,170404550,170404763	170306842,170319124,170323259,170330550,170348323,170358318,170388493,170391121,170395579,170404601,170407065	Gene ID= ENSG00000112584.13 TPM= 3.86 Transcript Type= protein_coding
chr6	170535117	170553341	170535117	170553341	-	ENST00000262193.6@PSMB1	ENST00000262193.6	protein_coding	170553130,170549006,170546103,170543601,170537234,170535117	170553341,170549113,170546184,170543730,170537340,170535405	Gene ID= ENSG00000008018.8 TPM= 278.97 Transcript Type= protein_coding
chr6	170554333	170572869	170554333	170572869	+	ENST00000392092.6@TBP	ENST00000392092.6	protein_coding	170554333,170556882,170561791,170564545,170566918,170569612,170571410,170572186	170554463,170557083,170562233,170564632,170567009,170569779,170571504,170572869	Gene ID= ENSG00000112592.13 TPM= 12.07 Transcript Type= protein_coding
chr6	170554379	170572870	170554379	170572870	+	ENST00000230354.10@TBP	ENST00000230354.10	protein_coding	170554379,170556879,170561791,170564545,170566918,170569612,170571410,170572186	170554463,170557083,170562233,170564632,170567009,170569779,170571504,170572870	Gene ID= ENSG00000112592.13 TPM= 4.34 Transcript Type= protein_coding
chr6	170577124	170584646	170577124	170584646	-	transcript4999.chr6.nnic@PDCD2	transcript4999.chr6.nnic	protein_coding	170584497,170584299,170583505,170583057,170580002,170578857,170577124	170584646,170584410,170583623,170583188,170580105,170578970,170577717	Gene ID= ENSG00000071994.10 TPM= 1.93 Transcript Type= NA
chr6	170577124	170584630	170577124	170584630	-	transcript5000.chr6.nnic@PDCD2	transcript5000.chr6.nnic	protein_coding	170584526,170584299,170583505,170583057,170580002,170578857,170577124	170584630,170584409,170583747,170583188,170580105,170578970,170577717	Gene ID= ENSG00000071994.10 TPM= 1.93 Transcript Type= NA
chr6	170578482	170584630	170578482	170584630	-	transcript5007.chr6.nnic@PDCD2	transcript5007.chr6.nnic	protein_coding	170584526,170584299,170583505,170583057,170580002,170578857,170578482	170584630,170584409,170583747,170583188,170580105,170578970,170578656	Gene ID= ENSG00000071994.10 TPM= 2.41 Transcript Type= NA
chr6	170578482	170584646	170578482	170584646	-	transcript5008.chr6.nnic@PDCD2	transcript5008.chr6.nnic	protein_coding	170584497,170584299,170583505,170583057,170580002,170578857,170578482	170584646,170584410,170583747,170583188,170580105,170578970,170578656	Gene ID= ENSG00000071994.10 TPM= 3.38 Transcript Type= NA
chr6	170575295	170584660	170575295	170584660	-	ENST00000541970.5@PDCD2	ENST00000541970.5	protein_coding	170584299,170583505,170583057,170580002,170578857,170575295	170584660,170583747,170583188,170580105,170578970,170577717	Gene ID= ENSG00000071994.10 TPM= 18.34 Transcript Type= protein_coding
chr6	170581748	170584692	170581748	170584692	-	ENST00000614056.4@PDCD2	ENST00000614056.4	protein_coding	170584299,170583505,170583057,170581748	170584692,170583747,170583188,170582265	Gene ID= ENSG00000071994.10 TPM= 1.93 Transcript Type= protein_coding
chr7	192969	260745	192969	260745	+	ENST00000313766.5@FAM20C	ENST00000313766.5	protein_coding	192969,195554,208898,246415,248315,255849,256654,257005,258646,259731	193804,195732,208976,246507,248430,256029,256763,257086,258705,260745	Gene ID= ENSG00000177706.8 TPM= 118.73 Transcript Type= protein_coding
chr7	259866	264448	259866	264448	+	transcript20.chr7.nnic@NA	transcript20.chr7.nnic	NA	259866	264448	Gene ID= novel_gene_chr7_21 TPM= 1.93 Transcript Type= NA
chr7	726679	786475	726679	786475	+	transcript30.chr7.nnic@DNAAF5	transcript30.chr7.nnic	protein_coding	726679,729663,740819,741347,754589,756782,761753,763806,770471,774048,775006,785517	727315,729847,740943,741465,754821,756994,761896,763974,770618,774198,775162,786475	Gene ID= ENSG00000164818.15 TPM= 7.72 Transcript Type= NA
chr7	726709	786475	726709	786475	+	transcript33.chr7.nnic@DNAAF5	transcript33.chr7.nnic	protein_coding	726709,754589,756782,761753,763806,770471,774048,775006,779953,785517	727315,754821,756994,761896,763974,770618,774198,775162,780144,786475	Gene ID= ENSG00000164818.15 TPM= 1.93 Transcript Type= NA
chr7	726679	731662	726679	731662	+	transcript35.chr7.nnic@DNAAF5	transcript35.chr7.nnic	protein_coding	726679,729663,729941	727315,729847,731662	Gene ID= ENSG00000164818.15 TPM= 2.9 Transcript Type= NA
chr7	726701	786475	726701	786475	+	ENST00000297440.10@DNAAF5	ENST00000297440.10	protein_coding	726701,729663,740819,741347,754589,756782,761753,763806,770471,774048,775006,779953,785517	727315,729847,740943,741465,754821,756994,761896,763974,770618,774198,775162,780144,786475	Gene ID= ENSG00000164818.15 TPM= 56.95 Transcript Type= protein_coding
chr7	816667	874902	816667	874902	+	transcript40.chr7.nnic@SUN1	transcript40.chr7.nnic	protein_coding	816667,817280,832505,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816871,817499,832601,838986,842130,843232,843520,848615,849603,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 16.62 Transcript Type= NA
chr7	816616	874902	816616	874902	+	transcript42.chr7.nic@SUN1	transcript42.chr7.nic	protein_coding	816616,832505,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,848615,849603,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 34 Transcript Type= NA
chr7	816616	874902	816616	874902	+	transcript56.chr7.nic@SUN1	transcript56.chr7.nic	protein_coding	816616,832505,838798,841946,843206,843341,848418,849520,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,848615,849603,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 5.54 Transcript Type= NA
chr7	816616	874902	816616	874902	+	transcript60.chr7.nnic@SUN1	transcript60.chr7.nnic	protein_coding	816616,832505,838798,841946,843206,843341,848418,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,848615,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 10.5 Transcript Type= NA
chr7	816616	874902	816616	874902	+	transcript75.chr7.nic@SUN1	transcript75.chr7.nic	protein_coding	816616,832505,838798,841946,843206,843341,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 5.54 Transcript Type= NA
chr7	816616	874902	816616	874902	+	transcript82.chr7.nnic@SUN1	transcript82.chr7.nnic	protein_coding	816616,832505,838798,841946,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 6.64 Transcript Type= NA
chr7	816616	874902	816616	874902	+	transcript85.chr7.nnic@SUN1	transcript85.chr7.nnic	protein_coding	816616,832505,838798,841946,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 8.44 Transcript Type= NA
chr7	816615	874920	816615	874920	+	ENST00000452783.6@SUN1	ENST00000452783.6	protein_coding	816615,832505,838798,841946,851950,852609,852813,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874920	Gene ID= ENSG00000164828.17 TPM= 2.55 Transcript Type= protein_coding
chr7	816616	843818	816616	843818	+	transcript93.chr7.nic@SUN1	transcript93.chr7.nic	protein_coding	816616,832505,838798,841946,843206,843341	816673,832601,838986,842130,843232,843818	Gene ID= ENSG00000164828.17 TPM= 7.72 Transcript Type= NA
chr7	832501	874902	832501	874902	+	ENST00000401592.5@SUN1	ENST00000401592.5	protein_coding	832501,838798,841946,843206,843341,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	832601,838986,842130,843232,843520,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 4.58 Transcript Type= protein_coding
chr7	832501	874900	832501	874900	+	ENST00000405266.5@SUN1	ENST00000405266.5	protein_coding	832501,838798,841946,843206,843341,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	832601,838986,842130,843232,843520,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874900	Gene ID= ENSG00000164828.17 TPM= 5.5 Transcript Type= protein_coding
chr7	876569	896434	876569	896434	+	transcript105.chr7.nic@GET4	transcript105.chr7.nic	protein_coding	876569,886056,886569,887370,890928,892278,893740,895334	876800,886134,886650,887519,891066,892418,893971,896434	Gene ID= ENSG00000239857.6 TPM= 17.38 Transcript Type= NA
chr7	876552	896434	876552	896434	+	ENST00000265857.7@GET4	ENST00000265857.7	protein_coding	876552,886056,886569,887370,890928,892278,893740,893899,895334	876800,886134,886650,887519,891066,892418,893815,893971,896434	Gene ID= ENSG00000239857.6 TPM= 149.62 Transcript Type= protein_coding
chr7	996987	1138257	996987	1138257	-	ENST00000397100.6@C7orf50	ENST00000397100.6	protein_coding	1138218,1127257,1009950,1000470,996987	1138257,1127386,1010143,1000551,997804	Gene ID= ENSG00000146540.14 TPM= 2.73 Transcript Type= protein_coding
chr7	996986	1138257	996986	1138257	-	ENST00000357429.10@C7orf50	ENST00000357429.10	protein_coding	1138189,1127257,1009950,1000470,996986	1138257,1127386,1010143,1000551,997804	Gene ID= ENSG00000146540.14 TPM= 22.04 Transcript Type= protein_coding
chr7	997016	1028339	997016	1028339	-	ENST00000412051.5@C7orf50	ENST00000412051.5	protein_coding	1028258,1009950,1000470,997016	1028339,1010143,1000551,997804	Gene ID= ENSG00000146540.14 TPM= 16.73 Transcript Type= protein_coding
chr7	1086876	1093815	1086876	1093815	+	ENST00000297469.3@GPER1	ENST00000297469.3	protein_coding	1086876,1091407	1087244,1093815	Gene ID= ENSG00000164850.14 TPM= 1.93 Transcript Type= protein_coding
chr7	1152908	1160185	1152908	1160185	-	transcript135.chr7.nic@ZFAND2A	transcript135.chr7.nic	protein_coding	1159964,1158158,1157656,1155453,1152908	1160185,1158257,1157750,1155584,1153131	Gene ID= ENSG00000178381.11 TPM= 6.27 Transcript Type= NA
chr7	1152907	1160178	1152907	1160178	-	ENST00000316495.7@ZFAND2A	ENST00000316495.7	protein_coding	1159964,1158158,1157656,1155453,1152907	1160178,1158257,1157750,1155584,1153224	Gene ID= ENSG00000178381.11 TPM= 24.62 Transcript Type= protein_coding
chr7	1434366	1459502	1434366	1459502	-	ENST00000297508.7@MICALL2	ENST00000297508.7	protein_coding	1459184,1450240,1448620,1447575,1446713,1444652,1442192,1440591,1439925,1438840,1438289,1438097,1437890,1437535,1436742,1435101,1434366	1459502,1450288,1448761,1447765,1446828,1445428,1442484,1440684,1440085,1438995,1438353,1438220,1437980,1437608,1436856,1435147,1434672	Gene ID= ENSG00000164877.18 TPM= 2.9 Transcript Type= protein_coding
chr7	1434358	1435934	1434358	1435934	-	transcript150.chr7.nnic@NA	transcript150.chr7.nnic	NA	1434358	1435934	Gene ID= novel_gene_chr7_151 TPM= 2.9 Transcript Type= NA
chr7	1470277	1504367	1470277	1504367	-	ENST00000404767.7@INTS1	ENST00000404767.7	protein_coding	1504323,1503903,1502901,1500170,1499884,1499473,1499255,1498975,1498707,1498412,1497138,1496156,1495433,1494816,1493754,1493010,1489591,1489344,1487760,1487320,1486922,1486625,1485290,1485098,1484003,1483742,1482546,1481342,1480835,1480317,1479430,1478726,1478366,1477753,1477550,1476794,1476570,1476229,1475948,1474705,1474168,1473566,1473072,1472273,1471571,1471133,1470846,1470277	1504367,1504001,1503191,1500366,1500021,1499632,1499360,1499161,1498852,1498553,1497314,1496264,1495553,1494893,1493911,1493106,1489682,1489404,1487957,1487449,1487101,1486774,1485469,1485202,1484170,1483853,1482707,1481488,1480933,1480441,1479684,1478885,1478506,1477936,1477673,1476918,1476657,1476455,1476071,1474838,1474360,1473693,1473184,1472386,1471641,1471224,1470955,1470692	Gene ID= ENSG00000164880.15 TPM= 178.1 Transcript Type= protein_coding
chr7	1530714	1543043	1530714	1543043	+	ENST00000343242.8@MAFK	ENST00000343242.8	protein_coding	1530714,1539149,1539941	1530898,1539228,1543043	Gene ID= ENSG00000198517.9 TPM= 110.05 Transcript Type= protein_coding
chr7	1537487	1542686	1537487	1542686	+	ENST00000403150.5@MAFK	ENST00000403150.5	protein_coding	1537487,1539149,1539941,1542299	1538457,1539228,1541274,1542686	Gene ID= ENSG00000198517.9 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr7	1535087	1538014	1535087	1538014	-	transcript161.chr7.nnic@NA	transcript161.chr7.nnic	NA	1535087	1538014	Gene ID= novel_gene_chr7_162 TPM= 11.58 Transcript Type= NA
chr7	1567330	1569993	1567330	1569993	-	ENST00000288607.2@PSMG3	ENST00000288607.2	protein_coding	1569124,1567330	1569993,1567850	Gene ID= ENSG00000157778.8 TPM= 24.13 Transcript Type= protein_coding
chr7	1567351	1570045	1567351	1570045	-	ENST00000404674.7@PSMG3	ENST00000404674.7	protein_coding	1570009,1569124,1567351	1570045,1569360,1567850	Gene ID= ENSG00000157778.8 TPM= 3.86 Transcript Type= protein_coding
chr7	1570104	1579485	1570104	1579485	+	transcript168.chr7.nic@PSMG3-AS1	transcript168.chr7.nic	lincRNA	1570104,1574715,1575787,1579287	1570279,1574863,1575888,1579485	Gene ID= ENSG00000230487.7 TPM= 2.9 Transcript Type= NA
chr7	1570073	1589626	1570073	1589626	+	ENST00000437621.6@PSMG3-AS1	ENST00000437621.6	lincRNA	1570073,1574715,1575787,1584384	1570279,1574863,1575888,1589626	Gene ID= ENSG00000230487.7 TPM= 3.86 Transcript Type= lincRNA
chr7	1815794	2233243	1815794	2233243	-	ENST00000406869.5@MAD1L1	ENST00000406869.5	protein_coding	2232872,2230549,2229984,2225410,2222575,2219332,2217962,2216157,2215885,2213212,2149152,2069194,2014502,2002065,1980453,1957629,1936687,1898200,1815794	2233243,2230724,2230143,2225550,2222754,2219456,2218043,2216287,2215999,2213273,2149238,2069338,2014642,2002121,1980541,1957719,1936897,1898390,1816228	Gene ID= ENSG00000002822.15 TPM= 22.2 Transcript Type= protein_coding
chr7	1815794	2232974	1815794	2232974	-	ENST00000399654.6@MAD1L1	ENST00000399654.6	protein_coding	2232872,2230549,2229984,2225410,2222575,2219332,2217962,2216157,2215885,2213212,2149152,2069194,2014502,2002065,1980453,1957629,1936687,1898200,1815794	2232974,2230764,2230143,2225550,2222754,2219456,2218043,2216287,2215999,2213273,2149238,2069338,2014642,2002121,1980541,1957719,1936897,1898390,1816228	Gene ID= ENSG00000002822.15 TPM= 2.9 Transcript Type= protein_coding
chr7	1815794	2232947	1815794	2232947	-	transcript175.chr7.nic@MAD1L1	transcript175.chr7.nic	protein_coding	2232872,2230549,2229984,2222575,2219332,2217962,2216157,2215885,2213212,2149152,2069194,2014502,2002065,1980453,1957629,1936687,1898200,1815794	2232947,2230724,2230143,2222754,2219456,2218043,2216287,2215999,2213273,2149238,2069338,2014642,2002121,1980541,1957719,1936897,1898390,1816228	Gene ID= ENSG00000002822.15 TPM= 10.62 Transcript Type= NA
chr7	2234286	2242205	2234286	2242205	-	transcript186.chr7.nnic@MRM2	transcript186.chr7.nnic	protein_coding	2242162,2239418,2238334,2234286	2242205,2239676,2238937,2235564	Gene ID= ENSG00000122687.17 TPM= 3.86 Transcript Type= NA
chr7	2234295	2242205	2234295	2242205	-	transcript188.chr7.nnic@MRM2	transcript188.chr7.nnic	protein_coding	2242162,2239418,2238015,2234295	2242205,2239676,2238937,2235564	Gene ID= ENSG00000122687.17 TPM= 2.9 Transcript Type= NA
chr7	2234195	2242205	2234195	2242205	-	transcript190.chr7.nnic@MRM2	transcript190.chr7.nnic	protein_coding	2242162,2239181,2234195	2242205,2239676,2235564	Gene ID= ENSG00000122687.17 TPM= 2.9 Transcript Type= NA
chr7	2234291	2242205	2234291	2242205	-	transcript194.chr7.nnic@MRM2	transcript194.chr7.nnic	protein_coding	2242162,2239530,2234291	2242205,2239676,2235564	Gene ID= ENSG00000122687.17 TPM= 1.93 Transcript Type= NA
chr7	2234293	2242205	2234293	2242205	-	transcript196.chr7.nnic@MRM2	transcript196.chr7.nnic	protein_coding	2242162,2239418,2234293	2242205,2239676,2235564	Gene ID= ENSG00000122687.17 TPM= 2.41 Transcript Type= NA
chr7	2234295	2242215	2234295	2242215	-	transcript200.chr7.nic@MRM2	transcript200.chr7.nic	protein_coding	2242162,2239181,2234295	2242215,2239707,2235564	Gene ID= ENSG00000122687.17 TPM= 4.34 Transcript Type= NA
chr7	2234291	2242198	2234291	2242198	-	ENST00000242257.12@MRM2	ENST00000242257.12	protein_coding	2242162,2239418,2234291	2242198,2239707,2235564	Gene ID= ENSG00000122687.17 TPM= 8.21 Transcript Type= protein_coding
chr7	2242222	2251145	2242222	2251145	+	ENST00000356714.5@NUDT1	ENST00000356714.5	protein_coding	2242222,2244563,2249857,2250829	2242256,2244726,2250002,2251145	Gene ID= ENSG00000106268.15 TPM= 5.79 Transcript Type= protein_coding
chr7	2251770	2314464	2251770	2314464	-	ENST00000222990.7@SNX8	ENST00000222990.7	protein_coding	2314328,2278100,2275112,2271850,2269559,2264298,2263230,2257735,2257365,2256874,2251770	2314464,2278305,2275229,2271971,2269639,2264458,2263362,2257803,2257514,2257023,2255169	Gene ID= ENSG00000106266.10 TPM= 32.82 Transcript Type= protein_coding
chr7	2354078	2380745	2354078	2380745	+	transcript206.chr7.nnic@EIF3B	transcript206.chr7.nnic	protein_coding	2354078,2354524,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380279	2354195,2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380745	Gene ID= ENSG00000106263.17 TPM= 21.44 Transcript Type= NA
chr7	2354866	2380743	2354866	2380743	+	ENST00000360876.8@EIF3B	ENST00000360876.8	protein_coding	2354866,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380204	2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380743	Gene ID= ENSG00000106263.17 TPM= 189.73 Transcript Type= protein_coding
chr7	2354882	2380745	2354882	2380745	+	ENST00000397011.2@EIF3B	ENST00000397011.2	protein_coding	2354882,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380279	2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380745	Gene ID= ENSG00000106263.17 TPM= 289.8 Transcript Type= protein_coding
chr7	2403560	2434579	2403560	2434579	+	ENST00000618655.1@CHST12	ENST00000618655.1	protein_coding	2403560,2432563	2403673,2434579	Gene ID= ENSG00000136213.9 TPM= 2.9 Transcript Type= protein_coding
chr7	2537877	2555727	2537877	2555727	-	ENST00000340611.8@BRAT1	ENST00000340611.8	protein_coding	2555487,2554305,2547324,2544909,2543590,2543204,2542120,2541718,2541298,2540979,2539786,2539544,2539179,2537877	2555727,2554447,2547478,2545056,2543962,2543323,2542211,2541836,2541484,2541052,2539888,2539642,2539351,2538764	Gene ID= ENSG00000106009.15 TPM= 81.09 Transcript Type= protein_coding
chr7	2558979	2594932	2558979	2594932	+	transcript242.chr7.nic@IQCE	transcript242.chr7.nic	protein_coding	2558979,2567116,2568954,2571526,2572192,2573418,2578242,2578476,2582580,2583637,2584236,2586208,2587822,2589907,2593022,2594886	2559217,2567163,2568999,2571654,2572326,2573488,2578355,2578526,2582650,2583709,2584285,2586371,2587877,2590106,2593126,2594932	Gene ID= ENSG00000106012.17 TPM= 1.93 Transcript Type= NA
chr7	2728112	2844324	2728112	2844324	-	ENST00000275364.7@GNA12	ENST00000275364.7	protein_coding	2843853,2794928,2733451,2728112	2844324,2795143,2733501,2731750	Gene ID= ENSG00000146535.13 TPM= 16.41 Transcript Type= protein_coding
chr7	4682273	4757664	4682273	4757664	+	transcript256.chr7.nic@FOXK1	transcript256.chr7.nic	protein_coding	4682273,4740838,4754459,4755237,4756994	4682868,4741023,4754615,4755383,4757664	Gene ID= ENSG00000164916.10 TPM= 1.93 Transcript Type= NA
chr7	4682309	4771443	4682309	4771443	+	ENST00000328914.4@FOXK1	ENST00000328914.4	protein_coding	4682309,4740838,4754459,4755237,4756994,4759051,4759311,4761064,4762184	4682868,4741023,4754615,4755383,4757187,4759217,4759595,4761288,4771443	Gene ID= ENSG00000164916.10 TPM= 50.2 Transcript Type= protein_coding
chr7	4775613	4791750	4775613	4791750	+	transcript269.chr7.nnic@AP5Z1	transcript269.chr7.nnic	protein_coding	4775613,4781175,4781568,4783316,4783689,4784203,4784908,4785415,4785522,4786302,4787634,4788154,4788840,4789832,4790459,4791115	4775756,4781312,4781844,4783460,4783798,4784371,4785048,4785452,4785684,4786428,4787776,4788294,4788951,4789929,4790887,4791750	Gene ID= ENSG00000242802.6 TPM= 2.9 Transcript Type= NA
chr7	4775613	4791750	4775613	4791750	+	transcript271.chr7.nnic@AP5Z1	transcript271.chr7.nnic	protein_coding	4775613,4781175,4783316,4783689,4784203,4784908,4785415,4785522,4786250,4787634,4788154,4788840,4789832,4790459,4790673,4791115	4775756,4781312,4783460,4783798,4784371,4785048,4785452,4785684,4786428,4787776,4788294,4788951,4789929,4790591,4790887,4791750	Gene ID= ENSG00000242802.6 TPM= 9.17 Transcript Type= NA
chr7	4775622	4791768	4775622	4791768	+	ENST00000348624.4@AP5Z1	ENST00000348624.4	protein_coding	4775622,4781175,4781568,4783316,4783689,4784203,4784908,4785415,4785522,4786250,4787634,4788154,4788840,4789832,4790459,4790673,4791115	4775756,4781312,4781754,4783460,4783798,4784371,4785048,4785452,4785684,4786428,4787776,4788294,4788951,4789929,4790591,4790887,4791768	Gene ID= ENSG00000242802.6 TPM= 48.75 Transcript Type= protein_coding
chr7	4799105	4883719	4799105	4883719	-	ENST00000399583.3@RADIL	ENST00000399583.3	protein_coding	4883596,4877605,4836358,4834607,4832141,4822394,4817239,4816228,4815278,4805566,4803546,4801653,4800171,4799630,4799105	4883719,4878203,4836605,4835239,4832178,4822554,4817351,4816465,4815450,4805716,4803754,4801995,4800310,4799769,4799483	Gene ID= ENSG00000157927.16 TPM= 3.86 Transcript Type= protein_coding
chr7	4974016	4989368	4974016	4989368	+	transcript284.chr7.nic@RNF216P1	transcript284.chr7.nic	transcribed_unprocessed_pseudogene	4974016,4976301,4983671,4984910,4989063	4974161,4976436,4983773,4985075,4989368	Gene ID= ENSG00000196204.11 TPM= 1.93 Transcript Type= NA
chr7	4974037	4998165	4974037	4998165	+	ENST00000404006.5@RNF216P1	ENST00000404006.5	transcribed_unprocessed_pseudogene	4974037,4976301,4983671,4984910,4989063,4996610	4974161,4976436,4983773,4985075,4989177,4998165	Gene ID= ENSG00000196204.11 TPM= 5.79 Transcript Type= processed_transcript
chr7	5045922	5069488	5045922	5069488	+	ENST00000396912.1@RBAK	ENST00000396912.1	protein_coding	5045922,5048033,5057295,5057684,5063695	5046396,5048091,5057421,5057779,5069488	Gene ID= ENSG00000146587.17 TPM= 1.93 Transcript Type= protein_coding
chr7	5190188	5233826	5190188	5233826	+	ENST00000288828.8@WIPI2	ENST00000288828.8	protein_coding	5190188,5193118,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835	5190493,5193171,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229738,5233826	Gene ID= ENSG00000157954.14 TPM= 2.9 Transcript Type= protein_coding
chr7	5190246	5231104	5190246	5231104	+	ENST00000404704.7@WIPI2	ENST00000404704.7	protein_coding	5190246,5193118,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835	5190493,5193171,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229705,5231104	Gene ID= ENSG00000157954.14 TPM= 1.93 Transcript Type= protein_coding
chr7	5282930	5306870	5282930	5306870	+	ENST00000396872.7@SLC29A4	ENST00000396872.7	protein_coding	5282930,5287809,5290732,5291124,5291693,5294860,5296936,5298988,5299240,5300422,5302797	5283082,5287985,5290863,5291237,5291821,5294934,5297198,5299126,5299427,5300662,5306870	Gene ID= ENSG00000164638.10 TPM= 1.93 Transcript Type= protein_coding
chr7	5282969	5304060	5282969	5304060	+	ENST00000297195.8@SLC29A4	ENST00000297195.8	protein_coding	5282969,5287806,5290732,5291124,5291693,5294860,5296936,5298988,5299240,5300422,5302797	5283082,5287985,5290863,5291237,5291821,5294934,5297198,5299126,5299427,5300662,5304060	Gene ID= ENSG00000164638.10 TPM= 6.76 Transcript Type= protein_coding
chr7	5420043	5421528	5420043	5421528	+	transcript315.chr7.nnic@NA	transcript315.chr7.nnic	NA	5420043	5421528	Gene ID= novel_gene_chr7_316 TPM= 2.9 Transcript Type= NA
chr7	5425770	5426401	5425770	5426401	+	ENST00000609130.1@AC092171.4	ENST00000609130.1	lincRNA	5425770	5426401	Gene ID= ENSG00000272953.1 TPM= 1.93 Transcript Type= lincRNA
chr7	5489178	5513809	5489178	5513809	-	transcript324.chr7.nic@FBXL18	transcript324.chr7.nic	protein_coding	5513657,5505412,5500488,5491231,5489178	5513809,5505630,5502031,5491449,5490212	Gene ID= ENSG00000155034.18 TPM= 3.38 Transcript Type= NA
chr7	5480558	5513798	5480558	5513798	-	ENST00000382368.7@FBXL18	ENST00000382368.7	protein_coding	5513657,5505412,5500488,5491231,5480558	5513798,5505630,5502031,5491449,5481931	Gene ID= ENSG00000155034.18 TPM= 11.1 Transcript Type= protein_coding
chr7	5526435	5527637	5526435	5527637	+	transcript336.chr7.nnic@NA	transcript336.chr7.nnic	NA	5526435	5527637	Gene ID= novel_gene_chr7_337 TPM= 125.49 Transcript Type= NA
chr7	5527151	5530709	5527151	5530709	-	ENST00000331789.9@ACTB	ENST00000331789.9	protein_coding	5530524,5529535,5529161,5528281,5528004,5527151	5530709,5529663,5529400,5528719,5528185,5527891	Gene ID= ENSG00000075624.13 TPM= 281.87 Transcript Type= protein_coding
chr7	5527151	5530629	5527151	5530629	-	transcript334.chr7.nic@ACTB	transcript334.chr7.nic	protein_coding	5530524,5529535,5529161,5528281,5528004,5527151	5530629,5529663,5529400,5529059,5528185,5527891	Gene ID= ENSG00000075624.13 TPM= 21.24 Transcript Type= NA
chr7	5527156	5530601	5527156	5530601	-	ENST00000425660.5@ACTB	ENST00000425660.5	protein_coding	5530524,5529535,5529161,5529019,5528281,5528004,5527156	5530601,5529663,5529400,5529059,5528719,5528185,5527891	Gene ID= ENSG00000075624.13 TPM= 76.26 Transcript Type= nonsense_mediated_decay
chr7	5527156	5530601	5527156	5530601	-	ENST00000462494.5@ACTB	ENST00000462494.5	protein_coding	5530524,5529535,5528281,5528004,5527156	5530601,5529663,5529400,5528185,5527891	Gene ID= ENSG00000075624.13 TPM= 13.51 Transcript Type= retained_intron
chr7	5592823	5606655	5592823	5606655	+	ENST00000382361.7@FSCN1	ENST00000382361.7	protein_coding	5592823,5603257,5603496,5603863,5605272	5593768,5603413,5603617,5604030,5606655	Gene ID= ENSG00000075618.17 TPM= 2.9 Transcript Type= protein_coding
chr7	5620047	5781696	5620047	5781696	-	ENST00000425013.6@RNF216	ENST00000425013.6	protein_coding	5781541,5761003,5752846,5740973,5739276,5730715,5729432,5725324,5721033,5716716,5715053,5712715,5711761,5652413,5641154,5624056,5620047	5781696,5761138,5752979,5741644,5739352,5730817,5729596,5725438,5721172,5716766,5715190,5712863,5711839,5652510,5641376,5624125,5623179	Gene ID= ENSG00000011275.18 TPM= 17.86 Transcript Type= protein_coding
chr7	5622607	5781739	5622607	5781739	-	ENST00000389902.7@RNF216	ENST00000389902.7	protein_coding	5781541,5761003,5752846,5740973,5739276,5730715,5729432,5725324,5721033,5716716,5715053,5712715,5711761,5652413,5641154,5624056,5622607	5781739,5761138,5752979,5741815,5739352,5730817,5729596,5725438,5721172,5716766,5715190,5712863,5711839,5652510,5641376,5624125,5623179	Gene ID= ENSG00000011275.18 TPM= 7.24 Transcript Type= protein_coding
chr7	5739195	5781676	5739195	5781676	-	transcript344.chr7.nic@RNF216	transcript344.chr7.nic	protein_coding	5781541,5761003,5752846,5740973,5739195	5781676,5761138,5752979,5741644,5739621	Gene ID= ENSG00000011275.18 TPM= 1.93 Transcript Type= NA
chr7	5898734	5925974	5898734	5925974	+	ENST00000325974.8@CCZ1	ENST00000325974.8	protein_coding	5898734,5900284,5900473,5900855,5901657,5902661,5905094,5910035,5911861,5912843,5918867,5919849,5923387,5923835,5925632	5898919,5900381,5900566,5900932,5901704,5902744,5905269,5910116,5911922,5912954,5918900,5919966,5923545,5923962,5925974	Gene ID= ENSG00000122674.11 TPM= 129.35 Transcript Type= protein_coding
chr7	6009243	6023834	6009243	6023834	+	transcript376.chr7.nnic@AIMP2	transcript376.chr7.nnic	protein_coding	6009243,6015146,6017814,6023303	6009378,6015352,6018045,6023834	Gene ID= ENSG00000106305.9 TPM= 9.85 Transcript Type= NA
chr7	6009245	6023834	6009245	6023834	+	ENST00000223029.7@AIMP2	ENST00000223029.7	protein_coding	6009245,6015146,6017814,6023303	6009498,6015352,6018045,6023834	Gene ID= ENSG00000106305.9 TPM= 162.37 Transcript Type= protein_coding
chr7	6024162	6059167	6024162	6059167	-	transcript354.chr7.nnic@EIF2AK1	transcript354.chr7.nnic	protein_coding	6058966,6054546,6049912,6048807,6046992,6046071,6044562,6042933,6040892,6038560,6037424,6028918,6028615,6026728,6024709,6024162	6059167,6054704,6050045,6048844,6047091,6046151,6044661,6042993,6041219,6038671,6037524,6029032,6028697,6026961,6024801,6024381	Gene ID= ENSG00000086232.12 TPM= 2.73 Transcript Type= NA
chr7	6022244	6059230	6022244	6059230	-	ENST00000199389.10@EIF2AK1	ENST00000199389.10	protein_coding	6058966,6054546,6049912,6048807,6046992,6046071,6044562,6042933,6040892,6038560,6037424,6028918,6028615,6026728,6022244	6059230,6054704,6050045,6048844,6047091,6046151,6044661,6042993,6041219,6038671,6037524,6029032,6028697,6026961,6024801	Gene ID= ENSG00000086232.12 TPM= 17.21 Transcript Type= protein_coding
chr7	6023835	6059168	6023835	6059168	-	transcript362.chr7.nnic@EIF2AK1	transcript362.chr7.nnic	protein_coding	6058966,6054556,6049912,6048807,6046992,6046071,6044562,6042933,6040892,6038560,6037424,6028918,6026728,6023835	6059168,6054704,6050045,6048844,6047091,6046151,6044661,6042993,6041219,6038671,6037524,6029032,6026961,6024801	Gene ID= ENSG00000086232.12 TPM= 2.25 Transcript Type= NA
chr7	6161776	6272644	6161776	6272644	-	ENST00000350796.7@CYTH3	ENST00000350796.7	protein_coding	6272474,6190449,6187657,6187050,6177823,6173653,6171202,6170830,6170535,6165734,6165545,6165273,6161776	6272644,6190531,6187721,6187116,6177941,6173733,6171314,6170978,6170646,6165810,6165616,6165427,6165016	Gene ID= ENSG00000008256.15 TPM= 48.27 Transcript Type= protein_coding
chr7	6329411	6348940	6329411	6348940	-	transcript385.chr7.nnic@FAM220A	transcript385.chr7.nnic	protein_coding	6348573,6338985,6329411	6348940,6339059,6331235	Gene ID= ENSG00000178397.12 TPM= 2.41 Transcript Type= NA
chr7	6329411	6348939	6329411	6348939	-	transcript387.chr7.nnic@FAM220A	transcript387.chr7.nnic	protein_coding	6348573,6347537,6329411	6348939,6347688,6331235	Gene ID= ENSG00000178397.12 TPM= 2.41 Transcript Type= NA
chr7	6329411	6348949	6329411	6348949	-	transcript388.chr7.nnic@FAM220A	transcript388.chr7.nnic	protein_coding	6348472,6329411	6348949,6331235	Gene ID= ENSG00000178397.12 TPM= 6.27 Transcript Type= NA
chr7	6374523	6403977	6374523	6403977	+	ENST00000348035.8@RAC1	ENST00000348035.8	protein_coding	6374523,6387212,6391924,6400126,6401868,6402316	6374770,6387283,6392041,6400188,6402027,6403977	Gene ID= ENSG00000136238.17 TPM= 150.59 Transcript Type= protein_coding
chr7	6374539	6402520	6374539	6402520	+	ENST00000356142.4@RAC1	ENST00000356142.4	protein_coding	6374539,6387212,6391924,6398662,6400126,6401868,6402316	6374770,6387283,6392041,6398718,6400188,6402027,6402520	Gene ID= ENSG00000136238.17 TPM= 2.9 Transcript Type= protein_coding
chr7	6409129	6448012	6409129	6448012	-	ENST00000297056.10@DAGLB	ENST00000297056.10	protein_coding	6447748,6445953,6436362,6434762,6432837,6430480,6425988,6424752,6421727,6416841,6416627,6412966,6412811,6410130,6409129	6448012,6446104,6436533,6435020,6432959,6430607,6426114,6424835,6421804,6416921,6416754,6413034,6412883,6410380,6410035	Gene ID= ENSG00000164535.14 TPM= 14.48 Transcript Type= protein_coding
chr7	6461081	6484242	6461081	6484242	-	ENST00000258739.8@KDELR2	ENST00000258739.8	protein_coding	6483967,6474184,6469596,6466071,6461081	6484242,6474284,6469754,6466323,6463175	Gene ID= ENSG00000136240.9 TPM= 108.11 Transcript Type= protein_coding
chr7	6577434	6588978	6577434	6588978	+	ENST00000396713.6@ZDHHC4	ENST00000396713.6	protein_coding	6577434,6578566,6580555,6581607,6582073,6583306,6585016,6588617	6577720,6578720,6580678,6581680,6582251,6583431,6585260,6588978	Gene ID= ENSG00000136247.14 TPM= 14.96 Transcript Type= protein_coding
chr7	6577434	6588978	6577434	6588978	+	ENST00000396707.6@ZDHHC4	ENST00000396707.6	protein_coding	6577434,6577590,6578566,6580555,6581607,6582073,6583306,6585016,6588617	6577498,6577720,6578720,6580678,6581680,6582251,6583431,6585260,6588978	Gene ID= ENSG00000136247.14 TPM= 15.93 Transcript Type= protein_coding
chr7	6577453	6588926	6577453	6588926	+	ENST00000335965.10@ZDHHC4	ENST00000335965.10	protein_coding	6577453,6578566,6580555,6581607,6582073,6583306,6585016,6588617	6577498,6578720,6580678,6581680,6582251,6583431,6585260,6588926	Gene ID= ENSG00000136247.14 TPM= 24.62 Transcript Type= protein_coding
chr7	6577434	6588931	6577434	6588931	+	ENST00000405731.7@ZDHHC4	ENST00000405731.7	protein_coding	6577434,6578501,6580555,6581607,6582073,6583306,6585016,6588617	6577498,6578720,6580678,6581680,6582251,6583431,6585260,6588931	Gene ID= ENSG00000136247.14 TPM= 5.31 Transcript Type= protein_coding
chr7	6590061	6608726	6590061	6608726	+	transcript424.chr7.nic@C7orf26	transcript424.chr7.nic	protein_coding	6590061,6591646,6594435,6599829,6602101,6607537,6607960	6590475,6591867,6594600,6600356,6602140,6607597,6608726	Gene ID= ENSG00000146576.12 TPM= 3.38 Transcript Type= NA
chr7	6590017	6608726	6590017	6608726	+	ENST00000344417.9@C7orf26	ENST00000344417.9	protein_coding	6590017,6591646,6594435,6599829,6602101,6607960	6590475,6591867,6594600,6600356,6602140,6608726	Gene ID= ENSG00000146576.12 TPM= 16.89 Transcript Type= protein_coding
chr7	6615578	6624286	6615578	6624286	+	transcript433.chr7.nnic@ZNF853	transcript433.chr7.nnic	protein_coding	6615578,6617185,6617585,6621122	6616186,6617307,6617662,6624286	Gene ID= ENSG00000236609.3 TPM= 3.86 Transcript Type= NA
chr7	6615511	6624290	6615511	6624290	+	transcript436.chr7.nnic@ZNF853	transcript436.chr7.nnic	protein_coding	6615511,6617185,6621122	6616186,6617307,6624290	Gene ID= ENSG00000236609.3 TPM= 36.68 Transcript Type= NA
chr7	6615617	6624290	6615617	6624290	+	ENST00000457543.3@ZNF853	ENST00000457543.3	protein_coding	6615617,6617190,6621122	6616186,6617307,6624290	Gene ID= ENSG00000236609.3 TPM= 80.12 Transcript Type= protein_coding
chr7	6637322	6656432	6637322	6656432	+	ENST00000382252.5@ZNF316	ENST00000382252.5	protein_coding	6637322,6637846,6639042,6641825,6642382,6642964,6643822,6644480,6652303	6637447,6638009,6639141,6641962,6642764,6643073,6643948,6644593,6656432	Gene ID= ENSG00000205903.6 TPM= 39.58 Transcript Type= protein_coding
chr7	6690452	6730073	6690452	6730073	-	transcript452.chr7.nnic@ZNF12	transcript452.chr7.nnic	protein_coding	6729852,6706432,6705159,6697685,6697339,6690452	6730073,6706909,6705223,6697811,6697434,6692703	Gene ID= ENSG00000164631.18 TPM= 7.72 Transcript Type= NA
chr7	6690452	6706955	6690452	6706955	-	transcript455.chr7.nnic@ZNF12	transcript455.chr7.nnic	protein_coding	6706432,6705159,6697685,6690452	6706955,6705223,6697811,6692703	Gene ID= ENSG00000164631.18 TPM= 5.79 Transcript Type= NA
chr7	6729779	6751550	6729779	6751550	+	transcript446.chr7.nic@PMS2CL	transcript446.chr7.nic	transcribed_unprocessed_pseudogene	6729779,6731897,6733399,6735305,6737076,6741685,6746088,6747036,6751249	6730301,6731955,6733527,6735389,6737936,6741852,6746188,6747205,6751550	Gene ID= ENSG00000187953.10 TPM= 1.93 Transcript Type= NA
chr7	6798941	6826770	6798941	6826770	-	ENST00000626257.2@CCZ1B	ENST00000626257.2	protein_coding	6826078,6824640,6824089,6823313,6822281,6819766,6814764,6812976,6811952,6806004,6804938,6801365,6800948,6798941	6826770,6824737,6824166,6823360,6822364,6819941,6814845,6813037,6812063,6806037,6805055,6801523,6801075,6799279	Gene ID= ENSG00000146574.15 TPM= 2.9 Transcript Type= protein_coding
chr7	7550104	7567384	7550104	7567384	-	transcript555.chr7.nnic@AC004982.2	transcript555.chr7.nnic	lincRNA	7565914,7555156,7554688,7552159,7550104	7567384,7555189,7554743,7552279,7551476	Gene ID= ENSG00000272894.5 TPM= 1.93 Transcript Type= NA
chr7	7551238	7567384	7551238	7567384	-	transcript563.chr7.nnic@AC004982.2	transcript563.chr7.nnic	lincRNA	7565914,7555156,7552159,7551238	7567384,7555189,7552341,7551476	Gene ID= ENSG00000272894.5 TPM= 1.93 Transcript Type= NA
chr7	7566802	7607496	7566802	7607496	+	transcript508.chr7.nic@MIOS	transcript508.chr7.nic	protein_coding	7566802,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 12.55 Transcript Type= NA
chr7	7566872	7607496	7566872	7607496	+	ENST00000340080.8@MIOS	ENST00000340080.8	protein_coding	7566872,7567607,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7567688,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 60.81 Transcript Type= protein_coding
chr7	7566875	7607223	7566875	7607223	+	ENST00000405785.5@MIOS	ENST00000405785.5	protein_coding	7566875,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607223	Gene ID= ENSG00000164654.15 TPM= 42.47 Transcript Type= protein_coding
chr7	7640752	7879185	7640752	7879185	+	transcript584.chr7.nic@UMAD1	transcript584.chr7.nic	protein_coding	7640752,7673309,7801670,7877281	7640821,7673453,7801743,7879185	Gene ID= ENSG00000219545.11 TPM= 4.83 Transcript Type= NA
chr7	7689344	7879185	7689344	7879185	+	transcript589.chr7.nnic@UMAD1	transcript589.chr7.nnic	protein_coding	7689344,7801670,7877281	7689460,7801743,7879185	Gene ID= ENSG00000219545.11 TPM= 1.93 Transcript Type= NA
chr7	7640776	7879185	7640776	7879185	+	ENST00000636849.1@UMAD1	ENST00000636849.1	protein_coding	7640776,7673322,7801670,7877281	7640821,7673453,7801743,7879185	Gene ID= ENSG00000219545.11 TPM= 9.65 Transcript Type= protein_coding
chr7	7968794	8089080	7968794	8089080	+	ENST00000223145.9@GLCCI1	ENST00000223145.9	protein_coding	7968794,8003908,8022483,8055433,8060096,8070921,8084897,8086193	7969807,8004059,8022569,8055549,8060248,8071131,8085017,8089080	Gene ID= ENSG00000106415.12 TPM= 1.93 Transcript Type= protein_coding
chr7	10973872	11103655	10973872	11103655	+	ENST00000403050.7@PHF14	ENST00000403050.7	protein_coding	10973872,10974835,10982372,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11102486	10974324,10974945,10983159,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11103655	Gene ID= ENSG00000106443.15 TPM= 2.41 Transcript Type= protein_coding
chr7	10973889	11169623	10973889	11169623	+	ENST00000423760.6@PHF14	ENST00000423760.6	protein_coding	10973889,10974835,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11111350,11169416	10974324,10974945,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11111467,11169623	Gene ID= ENSG00000106443.15 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr7	10973904	11169630	10973904	11169630	+	ENST00000634607.1@PHF14	ENST00000634607.1	protein_coding	10973904,10974835,10982372,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11111350,11169416	10974324,10974945,10983159,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11111467,11169630	Gene ID= ENSG00000106443.15 TPM= 3.38 Transcript Type= protein_coding
chr7	12686856	12689179	12686856	12689179	+	ENST00000396662.5@ARL4A	ENST00000396662.5	protein_coding	12686856,12687635,12688166	12687043,12687728,12689179	Gene ID= ENSG00000122644.12 TPM= 1.93 Transcript Type= protein_coding
chr7	15611212	15686812	15611212	15686812	-	ENST00000262041.5@MEOX2	ENST00000262041.5	protein_coding	15685886,15626746,15611212	15686812,15626918,15612611	Gene ID= ENSG00000106511.5 TPM= 3.86 Transcript Type= protein_coding
chr7	16599776	16645567	16599776	16645567	-	transcript642.chr7.nic@ANKMY2	transcript642.chr7.nic	protein_coding	16645507,16644685,16636391,16627040,16624983,16615744,16610549,16609630,16604721,16602380,16599776	16645567,16644812,16636455,16627178,16625081,16615904,16610763,16609765,16604849,16602509,16600945	Gene ID= ENSG00000106524.8 TPM= 1.93 Transcript Type= NA
chr7	16599776	16645817	16599776	16645817	-	ENST00000306999.6@ANKMY2	ENST00000306999.6	protein_coding	16645507,16636391,16627040,16624983,16615744,16610549,16609630,16604721,16602380,16599776	16645817,16636455,16627178,16625081,16615904,16610763,16609765,16604849,16602509,16600945	Gene ID= ENSG00000106524.8 TPM= 14.48 Transcript Type= protein_coding
chr7	16646131	16706523	16646131	16706523	+	ENST00000258761.7@BZW2	ENST00000258761.7	protein_coding	16646131,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16646288,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706523	Gene ID= ENSG00000136261.14 TPM= 95.28 Transcript Type= protein_coding
chr7	16646134	16706512	16646134	16706512	+	ENST00000433922.6@BZW2	ENST00000433922.6	protein_coding	16646134,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16646304,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706512	Gene ID= ENSG00000136261.14 TPM= 10.81 Transcript Type= protein_coding
chr7	16661207	16706512	16661207	16706512	+	transcript654.chr7.nic@BZW2	transcript654.chr7.nic	protein_coding	16661207,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16661252,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706512	Gene ID= ENSG00000136261.14 TPM= 5.98 Transcript Type= NA
chr7	16646134	16706523	16646134	16706523	+	ENST00000630952.2@BZW2	ENST00000630952.2	protein_coding	16646134,16665437,16674412,16681301,16682780,16689797,16694834,16696915,16698048,16704547,16706060	16646288,16665501,16674588,16681404,16682845,16689906,16695004,16697061,16698186,16704669,16706523	Gene ID= ENSG00000136261.14 TPM= 4.34 Transcript Type= protein_coding
chr7	16646131	16704662	16646131	16704662	+	ENST00000415365.5@BZW2	ENST00000415365.5	protein_coding	16646131,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547	16646304,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704662	Gene ID= ENSG00000136261.14 TPM= 3.09 Transcript Type= protein_coding
chr7	16646174	16706509	16646174	16706509	+	ENST00000436868.5@BZW2	ENST00000436868.5	protein_coding	16646174,16665437,16674412,16681301,16682780,16685924,16689797,16694834,16696915,16698048,16704547,16706060	16646288,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706509	Gene ID= ENSG00000136261.14 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr7	16753535	16784536	16753535	16784536	+	ENST00000262067.4@TSPAN13	ENST00000262067.4	protein_coding	16753535,16776211,16777042,16777798,16779003,16783417	16754030,16776378,16777122,16777911,16779116,16784536	Gene ID= ENSG00000106537.7 TPM= 7.72 Transcript Type= protein_coding
chr7	17790761	17940512	17790761	17940512	-	transcript667.chr7.nic@SNX13	transcript667.chr7.nic	protein_coding	17940284,17897334,17893332,17891546,17890363,17875669,17875480,17873528,17868407,17850826,17850347,17845595,17839807,17834761,17834052,17830010,17826022,17821509,17816182,17814834,17803419,17801588,17799009,17798690,17796827,17790761	17940512,17897446,17893434,17891635,17890484,17875790,17875581,17873616,17868490,17850964,17850435,17845694,17840000,17834865,17834184,17830047,17826091,17821681,17816289,17814944,17803580,17801659,17799154,17798758,17796939,17794292	Gene ID= ENSG00000071189.21 TPM= 4.05 Transcript Type= NA
chr7	17816220	17940512	17816220	17940512	-	transcript684.chr7.nic@SNX13	transcript684.chr7.nic	protein_coding	17940284,17897334,17893332,17891546,17890363,17875669,17875480,17873528,17868407,17850826,17850347,17845595,17839807,17834761,17834052,17830010,17826022,17821509,17816220	17940512,17897446,17893434,17891635,17890484,17875790,17875581,17873616,17868490,17850964,17850435,17845694,17840000,17834865,17834184,17830047,17826091,17821648,17816289	Gene ID= ENSG00000071189.21 TPM= 2.9 Transcript Type= NA
chr7	17790761	17940494	17790761	17940494	-	ENST00000428135.7@SNX13	ENST00000428135.7	protein_coding	17940284,17897334,17893332,17891546,17890363,17875669,17875480,17873528,17868407,17850826,17850347,17845595,17839807,17834761,17834052,17830010,17826022,17821509,17816182,17814834,17803419,17801588,17799009,17798690,17796827,17790761	17940494,17897446,17893434,17891635,17890484,17875790,17875581,17873616,17868490,17850964,17850435,17845694,17840000,17834865,17834184,17830047,17826091,17821648,17816289,17814944,17803580,17801659,17799154,17798758,17796939,17794292	Gene ID= ENSG00000071189.21 TPM= 6.76 Transcript Type= protein_coding
chr7	18495710	18543902	18495710	18543902	+	transcript693.chr7.nic@HDAC9	transcript693.chr7.nic	protein_coding	18495710,18496262,18543169	18496023,18496324,18543902	Gene ID= ENSG00000048052.21 TPM= 1.93 Transcript Type= NA
chr7	19695462	19709087	19695462	19709087	-	ENST00000222567.5@TWISTNB	ENST00000222567.5	protein_coding	19708763,19704779,19700072,19695462	19709087,19704920,19700280,19698727	Gene ID= ENSG00000105849.5 TPM= 2.9 Transcript Type= protein_coding
chr7	20002765	20003247	20002765	20003247	+	ENST00000396599.2@RPL21P75	ENST00000396599.2	processed_pseudogene	20002765	20003247	Gene ID= ENSG00000213860.4 TPM= 58.88 Transcript Type= processed_pseudogene
chr7	21428063	21514554	21428063	21514554	+	transcript706.chr7.nnic@SP4	transcript706.chr7.nnic	protein_coding	21428063,21428677,21429323,21477079,21481924,21511022	21428258,21428792,21430843,21477307,21482123,21514554	Gene ID= ENSG00000105866.13 TPM= 2.9 Transcript Type= NA
chr7	21900901	21946084	21900901	21946084	-	ENST00000406877.7@CDCA7L	ENST00000406877.7	protein_coding	21945781,21916754,21911617,21908130,21906568,21906289,21905506,21904110,21902978,21900901	21946084,21916894,21911754,21908507,21906639,21906456,21905631,21904259,21903114,21902352	Gene ID= ENSG00000164649.19 TPM= 5.79 Transcript Type= protein_coding
chr7	22812971	22822851	22812971	22822851	-	transcript715.chr7.nnic@TOMM7	transcript715.chr7.nnic	protein_coding	22822729,22818000,22812971	22822851,22818048,22813185	Gene ID= ENSG00000196683.10 TPM= 20.75 Transcript Type= NA
chr7	22812628	22822849	22812628	22822849	-	ENST00000463284.2@TOMM7	ENST00000463284.2	protein_coding	22822677,22812628	22822849,22813185	Gene ID= ENSG00000196683.10 TPM= 9.65 Transcript Type= processed_transcript
chr7	22941269	23014130	22941269	23014130	-	ENST00000440481.5@FAM126A	ENST00000440481.5	protein_coding	23013925,22983944,22978269,22977341,22976693,22976210,22964415,22961235,22960256,22946952,22941269	23014130,22984045,22978448,22977421,22976808,22976305,22964531,22961322,22960415,22947247,22946163	Gene ID= ENSG00000122591.11 TPM= 1.93 Transcript Type= protein_coding
chr7	23105753	23175302	23105753	23175302	+	transcript735.chr7.nnic@KLHL7	transcript735.chr7.nnic	protein_coding	23105753,23123777,23124688,23125048,23125761,23140769,23143851,23152067,23165698,23167836,23172948,23174015	23106146,23123879,23124781,23125172,23125799,23140944,23144025,23152209,23165938,23168037,23173045,23175302	Gene ID= ENSG00000122550.17 TPM= 4.83 Transcript Type= NA
chr7	23105758	23175302	23105758	23175302	+	ENST00000521082.5@KLHL7	ENST00000521082.5	protein_coding	23105758,23117834,23123777,23124688,23125048,23140769,23143851,23152067,23165698,23167836,23172948,23174015	23106146,23117964,23123879,23124781,23125172,23140944,23144025,23152209,23165938,23168037,23173045,23175302	Gene ID= ENSG00000122550.17 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr7	23105753	23144496	23105753	23144496	+	transcript744.chr7.nic@KLHL7	transcript744.chr7.nic	protein_coding	23105753,23123777,23124688,23125048,23140769,23143851	23106146,23123879,23124781,23125172,23140944,23144496	Gene ID= ENSG00000122550.17 TPM= 2.9 Transcript Type= NA
chr7	23105785	23126045	23105785	23126045	+	ENST00000322275.9@KLHL7	ENST00000322275.9	protein_coding	23105785,23123777,23124688,23125048,23125761	23106146,23123879,23124781,23125172,23126045	Gene ID= ENSG00000122550.17 TPM= 2.9 Transcript Type= protein_coding
chr7	23181827	23201009	23181827	23201009	+	ENST00000258742.9@NUPL2	ENST00000258742.9	protein_coding	23181827,23185070,23187052,23195839,23196680,23199458,23200168	23182206,23185298,23187146,23195915,23196766,23199542,23201009	Gene ID= ENSG00000136243.16 TPM= 3.86 Transcript Type= protein_coding
chr7	23246563	23275108	23246563	23275108	+	ENST00000258733.8@GPNMB	ENST00000258733.8	protein_coding	23246563,23253307,23254169,23256892,23259980,23260456,23266517,23267886,23269967,23273521,23274065	23246927,23253459,23254312,23257065,23260138,23260773,23266615,23267988,23270175,23273614,23275108	Gene ID= ENSG00000136235.15 TPM= 3.86 Transcript Type= protein_coding
chr7	23299200	23311729	23299200	23311729	+	ENST00000466681.1@MALSU1	ENST00000466681.1	protein_coding	23299200,23300839,23307868,23309356	23299608,23301017,23307949,23311729	Gene ID= ENSG00000156928.4 TPM= 45.37 Transcript Type= protein_coding
chr7	23504784	23532041	23504784	23532041	-	ENST00000538367.5@TRA2A	ENST00000538367.5	protein_coding	23531789,23522132,23521707,23516363,23512894,23507420,23506138,23505746,23504784	23532041,23522432,23521840,23516528,23513082,23507535,23506266,23505813,23505569	Gene ID= ENSG00000164548.10 TPM= 1.93 Transcript Type= protein_coding
chr7	23504780	23532041	23504780	23532041	-	ENST00000297071.8@TRA2A	ENST00000297071.8	protein_coding	23531789,23521707,23516363,23512894,23507420,23506138,23505746,23504780	23532041,23521840,23516528,23513082,23507535,23506266,23505813,23505569	Gene ID= ENSG00000164548.10 TPM= 5.79 Transcript Type= protein_coding
chr7	23597379	23644708	23597379	23644708	+	ENST00000307471.7@CCDC126	ENST00000307471.7	protein_coding	23597379,23597967,23611171,23642931	23597605,23598051,23611553,23644708	Gene ID= ENSG00000169193.11 TPM= 14.48 Transcript Type= protein_coding
chr7	23597416	23602220	23597416	23602220	+	ENST00000484553.5@CCDC126	ENST00000484553.5	protein_coding	23597416,23597967,23601871	23597605,23598051,23602220	Gene ID= ENSG00000169193.11 TPM= 2.9 Transcript Type= processed_transcript
chr7	24573346	24694193	24573346	24694193	+	ENST00000222644.9@MPP6	ENST00000222644.9	protein_coding	24573346,24623666,24641716,24649612,24650485,24663590,24665588,24666021,24668499,24679131,24680392,24687438	24573593,24623784,24641868,24649764,24650712,24663721,24665687,24666089,24668660,24679333,24680520,24694193	Gene ID= ENSG00000105926.15 TPM= 1.93 Transcript Type= protein_coding
chr7	24698353	24758113	24698353	24758113	-	ENST00000342947.7@DFNA5	ENST00000342947.7	protein_coding	24757707,24749564,24744562,24719047,24717254,24710224,24708127,24706184,24702760,24698353	24758113,24749793,24744754,24719218,24717374,24710388,24708254,24706376,24702833,24699259	Gene ID= ENSG00000105928.13 TPM= 8.69 Transcript Type= protein_coding
chr7	24757232	24758757	24757232	24758757	+	transcript794.chr7.nnic@NA	transcript794.chr7.nnic	NA	24757232	24758757	Gene ID= novel_gene_chr7_795 TPM= 1.93 Transcript Type= NA
chr7	25118650	25121340	25118650	25121340	-	transcript806.chr7.nnic@NA	transcript806.chr7.nnic	NA	25118650	25121340	Gene ID= novel_gene_chr7_807 TPM= 2.9 Transcript Type= NA
chr7	25118725	25119531	25118725	25119531	-	transcript802.chr7.nnic@NA	transcript802.chr7.nnic	NA	25118725	25119531	Gene ID= novel_gene_chr7_803 TPM= 1.93 Transcript Type= NA
chr7	25120091	25125361	25120091	25125361	-	ENST00000305786.6@CYCS	ENST00000305786.6	protein_coding	25125200,25123951,25120091	25125361,25124127,25123849	Gene ID= ENSG00000172115.8 TPM= 184.37 Transcript Type= protein_coding
chr7	26189927	26200766	26189927	26200766	-	transcript819.chr7.nic@HNRNPA2B1	transcript819.chr7.nic	protein_coding	26200572,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26190993,26189927	26200766,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26191128,26190460	Gene ID= ENSG00000122566.20 TPM= 14.48 Transcript Type= NA
chr7	26190125	26200746	26190125	26200746	-	ENST00000360787.8@HNRNPA2B1	ENST00000360787.8	protein_coding	26200572,26197831,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26190993,26190125	26200746,26197866,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26191128,26190460	Gene ID= ENSG00000122566.20 TPM= 7 Transcript Type= nonsense_mediated_decay
chr7	26191844	26200746	26191844	26200746	-	ENST00000356674.7@HNRNPA2B1	ENST00000356674.7	protein_coding	26200572,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26191844	26200746,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26192338	Gene ID= ENSG00000122566.20 TPM= 146.73 Transcript Type= protein_coding
chr7	26201715	26203022	26201715	26203022	+	transcript872.chr7.nic@CBX3	transcript872.chr7.nic	protein_coding	26201715,26202971	26201826,26203022	Gene ID= ENSG00000122565.18 TPM= 27.03 Transcript Type= NA
chr7	26201162	26213356	26201162	26213356	+	ENST00000337620.8@CBX3	ENST00000337620.8	protein_coding	26201162,26202971,26206368,26208393,26211662,26212082	26201561,26203022,26206510,26208555,26211756,26213356	Gene ID= ENSG00000122565.18 TPM= 3.7 Transcript Type= protein_coding
chr7	26201693	26213351	26201693	26213351	+	ENST00000396386.6@CBX3	ENST00000396386.6	protein_coding	26201693,26202971,26206368,26208393,26211662,26212082	26201826,26203022,26206510,26208555,26211756,26213351	Gene ID= ENSG00000122565.18 TPM= 105.05 Transcript Type= protein_coding
chr7	26201765	26213356	26201765	26213356	+	ENST00000409747.5@CBX3	ENST00000409747.5	protein_coding	26201765,26202971,26206368,26208466,26211662,26212082	26201826,26203022,26206510,26208555,26211756,26213356	Gene ID= ENSG00000122565.18 TPM= 7.08 Transcript Type= protein_coding
chr7	26291874	26372022	26291874	26372022	+	transcript875.chr7.nic@SNX10	transcript875.chr7.nic	protein_coding	26291874,26346420,26360975,26364535,26365047,26371821	26292086,26346466,26361061,26364635,26365145,26372022	Gene ID= ENSG00000086300.15 TPM= 1.93 Transcript Type= NA
chr7	26291923	26374325	26291923	26374325	+	ENST00000338523.8@SNX10	ENST00000338523.8	protein_coding	26291923,26346420,26360975,26364535,26365047,26371821,26372491	26292086,26346466,26361061,26364635,26365145,26372033,26374325	Gene ID= ENSG00000086300.15 TPM= 1.93 Transcript Type= protein_coding
chr7	26667062	26864743	26667062	26864743	-	ENST00000345317.6@SKAP2	ENST00000345317.6	protein_coding	26864363,26854785,26854137,26844030,26739887,26738795,26726882,26725923,26725428,26690285,26684736,26670091,26667062	26864743,26854890,26854162,26844137,26739964,26738878,26727006,26725986,26725565,26690362,26684848,26670192,26669656	Gene ID= ENSG00000005020.12 TPM= 3.86 Transcript Type= protein_coding
chr7	27096094	27100154	27096094	27100154	+	ENST00000434063.3@HOTAIRM1	ENST00000434063.3	antisense_RNA	27096094,27099779	27096388,27100154	Gene ID= ENSG00000233429.9 TPM= 1.93 Transcript Type= antisense_RNA
chr7	27096113	27100258	27096113	27100258	+	transcript884.chr7.nnic@NA	transcript884.chr7.nnic	NA	27096113	27100258	Gene ID= novel_gene_chr7_885 TPM= 1.93 Transcript Type= NA
chr7	27153716	27156677	27153716	27156677	-	ENST00000242159.4@HOXA7	ENST00000242159.4	protein_coding	27156167,27153716	27156677,27155222	Gene ID= ENSG00000122592.7 TPM= 3.86 Transcript Type= protein_coding
chr7	27162435	27165530	27162435	27165530	-	ENST00000343483.6@HOXA9	ENST00000343483.6	protein_coding	27164878,27162435	27165530,27163841	Gene ID= ENSG00000078399.17 TPM= 27.03 Transcript Type= protein_coding
chr7	27162437	27165316	27162437	27165316	-	transcript906.chr7.nnic@NA	transcript906.chr7.nnic	NA	27162437	27165316	Gene ID= novel_gene_chr7_907 TPM= 2.9 Transcript Type= NA
chr7	27170592	27174217	27170592	27174217	-	transcript887.chr7.nnic@HOXA10	transcript887.chr7.nnic	protein_coding	27173824,27173532,27173349,27170592	27174217,27173604,27173394,27172173	Gene ID= ENSG00000253293.4 TPM= 3.86 Transcript Type= NA
chr7	27171220	27180261	27171220	27180261	-	ENST00000396344.4@HOXA10	ENST00000396344.4	protein_coding	27179646,27171220	27180261,27172173	Gene ID= ENSG00000253293.4 TPM= 2.9 Transcript Type= protein_coding
chr7	27170591	27174306	27170591	27174306	-	ENST00000283921.4@HOXA10	ENST00000283921.4	protein_coding	27173349,27170591	27174306,27172173	Gene ID= ENSG00000253293.4 TPM= 43.44 Transcript Type= protein_coding
chr7	27181515	27185216	27181515	27185216	-	ENST00000006015.3@HOXA11	ENST00000006015.3	protein_coding	27184436,27181515	27185216,27183028	Gene ID= ENSG00000005073.5 TPM= 2.9 Transcript Type= protein_coding
chr7	27525442	27663004	27525442	27663004	-	transcript911.chr7.nnic@HIBADH	transcript911.chr7.nnic	protein_coding	27662698,27649473,27632336,27629371,27542967,27538341,27531192,27526141,27525442	27663004,27649633,27632445,27629492,27543100,27538417,27531348,27526372,27525868	Gene ID= ENSG00000106049.8 TPM= 4.44 Transcript Type= NA
chr7	27525442	27662880	27525442	27662880	-	transcript913.chr7.nnic@HIBADH	transcript913.chr7.nnic	protein_coding	27662698,27649473,27636676,27632336,27629371,27542967,27538341,27531192,27525442	27662880,27649633,27636737,27632426,27629492,27543100,27538417,27531348,27526372	Gene ID= ENSG00000106049.8 TPM= 3.72 Transcript Type= NA
chr7	27525442	27662934	27525442	27662934	-	transcript918.chr7.nnic@HIBADH	transcript918.chr7.nnic	protein_coding	27662698,27649473,27632336,27629371,27542967,27538341,27531192,27525442	27662934,27649633,27632426,27629492,27543100,27538417,27531348,27526372	Gene ID= ENSG00000106049.8 TPM= 6.61 Transcript Type= NA
chr7	27525442	27662995	27525442	27662995	-	ENST00000265395.6@HIBADH	ENST00000265395.6	protein_coding	27662698,27649473,27632336,27629371,27542967,27538341,27531192,27525442	27662995,27649633,27632445,27629492,27543100,27538417,27531348,27526372	Gene ID= ENSG00000106049.8 TPM= 103.14 Transcript Type= protein_coding
chr7	27740095	27828881	27740095	27828881	+	ENST00000265393.10@TAX1BP1	ENST00000265393.10	protein_coding	27740095,27748518,27758031,27765834,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27816349,27816890,27827738,27828628	27740269,27748686,27758133,27766021,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27816394,27817038,27827820,27828881	Gene ID= ENSG00000106052.13 TPM= 137.32 Transcript Type= protein_coding
chr7	27740095	27829765	27740095	27829765	+	ENST00000433216.6@TAX1BP1	ENST00000433216.6	protein_coding	27740095,27748518,27758031,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27816349,27816890,27827738,27828628	27740269,27748686,27758133,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27816394,27817038,27827820,27829765	Gene ID= ENSG00000106052.13 TPM= 1.93 Transcript Type= protein_coding
chr7	27740189	27829263	27740189	27829263	+	ENST00000396319.6@TAX1BP1	ENST00000396319.6	protein_coding	27740189,27748518,27758031,27765834,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27816349,27816890,27827738,27828628	27740269,27748686,27758133,27766021,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27816520,27817038,27827820,27829263	Gene ID= ENSG00000106052.13 TPM= 18.48 Transcript Type= protein_coding
chr7	27740147	27828864	27740147	27828864	+	ENST00000416801.6@TAX1BP1	ENST00000416801.6	protein_coding	27740147,27748518,27758031,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27816349,27816890,27827738,27828628	27740269,27748686,27758133,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27816394,27817038,27827820,27828864	Gene ID= ENSG00000106052.13 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr7	27830573	28180743	27830573	28180743	-	ENST00000283928.9@JAZF1	ENST00000283928.9	protein_coding	28180463,27991909,27895220,27840698,27830573	28180743,27991981,27895416,27840867,27832976	Gene ID= ENSG00000153814.11 TPM= 9.65 Transcript Type= protein_coding
chr7	28409482	28410758	28409482	28410758	+	transcript981.chr7.nnic@CREB5	transcript981.chr7.nnic	protein_coding	28409482,28409896	28409735,28410758	Gene ID= ENSG00000146592.16 TPM= 12.55 Transcript Type= NA
chr7	28954302	28956470	28954302	28956470	-	transcript985.chr7.nnic@NA	transcript985.chr7.nnic	NA	28954302	28956470	Gene ID= novel_gene_chr7_986 TPM= 1.93 Transcript Type= NA
chr7	28995231	29146537	28995231	29146537	-	ENST00000265394.9@CPVL	ENST00000265394.9	protein_coding	29146429,29120893,29112704,29096103,29095084,29092623,29086484,29072301,29071773,29066023,29064061,29030577,28995231	29146537,29121071,29112822,29096217,29095142,29092702,29086550,29072423,29071904,29066121,29064234,29030759,28995882	Gene ID= ENSG00000106066.14 TPM= 9.65 Transcript Type= protein_coding
chr7	28995634	29146535	28995634	29146535	-	transcript989.chr7.nic@CPVL	transcript989.chr7.nic	protein_coding	29146429,29120893,29112704,29096103,29095084,29092623,29086484,29072301,29071773,29030577,28995634	29146535,29121071,29112822,29096217,29095142,29092702,29086550,29072423,29071904,29030759,28995882	Gene ID= ENSG00000106066.14 TPM= 1.93 Transcript Type= NA
chr7	29194549	29514327	29194549	29514327	+	transcript992.chr7.nnic@CHN2	transcript992.chr7.nnic	protein_coding	29194549,29292925,29293570,29354625,29367932,29393679,29398373,29400543,29480279,29495952,29499867,29504744,29507228,29509301,29512564	29194990,29292963,29293608,29354663,29367987,29393710,29398486,29400828,29480356,29496036,29500040,29504821,29507365,29509406,29514327	Gene ID= ENSG00000106069.21 TPM= 4.83 Transcript Type= NA
chr7	29194421	29439811	29194421	29439811	+	transcript996.chr7.nnic@CHN2	transcript996.chr7.nnic	protein_coding	29194421,29354625,29367932,29393679,29398373,29400543,29439503	29194990,29354663,29367987,29393710,29398486,29400828,29439811	Gene ID= ENSG00000106069.21 TPM= 1.93 Transcript Type= NA
chr7	29920103	29989798	29920103	29989798	-	ENST00000242059.9@SCRN1	ENST00000242059.9	protein_coding	29989642,29968909,29955179,29943977,29940682,29936556,29926452,29920103	29989798,29969068,29955360,29944179,29940876,29936721,29926632,29924115	Gene ID= ENSG00000136193.16 TPM= 2.9 Transcript Type= protein_coding
chr7	30010587	30026684	30010587	30026684	-	ENST00000222803.9@FKBP14	ENST00000222803.9	protein_coding	30026312,30022665,30018996,30010587	30026684,30022816,30019123,30014893	Gene ID= ENSG00000106080.10 TPM= 2.9 Transcript Type= protein_coding
chr7	30028361	30084660	30028361	30084660	+	ENST00000449726.5@PLEKHA8	ENST00000449726.5	protein_coding	30028361,30045085,30046210,30047832,30049224,30050434,30052709,30054709,30055257,30060884,30061897,30062672,30074071,30078590	30028802,30045201,30046365,30047956,30049382,30050474,30052866,30054865,30055342,30060942,30062027,30062742,30074132,30084660	Gene ID= ENSG00000106086.18 TPM= 1.93 Transcript Type= protein_coding
chr7	30284624	30367692	30284624	30367692	+	transcript1021.chr7.nnic@ZNRF2	transcript1021.chr7.nnic	protein_coding	30284624,30323642,30350761,30355728,30362377,30366035	30285826,30323737,30350837,30355833,30362456,30367692	Gene ID= ENSG00000180233.10 TPM= 1.93 Transcript Type= NA
chr7	30284307	30367692	30284307	30367692	+	ENST00000323037.4@ZNRF2	ENST00000323037.4	protein_coding	30284307,30323642,30355728,30362377,30366035	30285826,30323737,30355833,30362456,30367692	Gene ID= ENSG00000180233.10 TPM= 4.83 Transcript Type= protein_coding
chr7	30284743	30371092	30284743	30371092	+	transcript1029.chr7.nnic@ZNRF2	transcript1029.chr7.nnic	protein_coding	30284743,30323642,30355728,30366035	30285826,30323737,30355833,30371092	Gene ID= ENSG00000180233.10 TPM= 1.93 Transcript Type= NA
chr7	30496621	30504829	30496621	30504829	-	ENST00000440082.5@GGCT	ENST00000440082.5	protein_coding	30504569,30498803,30496621	30504829,30498938,30497235	Gene ID= ENSG00000006625.17 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr7	30496621	30504844	30496621	30504844	-	ENST00000275428.8@GGCT	ENST00000275428.8	protein_coding	30504569,30500536,30498803,30496621	30504844,30500681,30498938,30497235	Gene ID= ENSG00000006625.17 TPM= 4.83 Transcript Type= protein_coding
chr7	30572497	30594777	30572497	30594777	-	transcript1037.chr7.nnic@AC005154.1	transcript1037.chr7.nnic	processed_transcript	30594711,30585330,30579231,30579006,30577649,30576564,30572497	30594777,30585479,30579314,30579128,30577737,30576710,30574881	Gene ID= ENSG00000196295.11 TPM= 1.93 Transcript Type= NA
chr7	30594681	30634033	30594681	30634033	+	ENST00000389266.7@GARS	ENST00000389266.7	protein_coding	30594681,30598796,30599947,30601059,30603034,30603496,30609585,30612096,30615896,30617114,30621393,30622317,30626234,30628560,30631448,30632247,30633735	30595143,30598897,30600049,30601200,30603122,30603572,30609730,30612245,30616058,30617278,30621500,30622462,30626319,30628669,30631541,30632437,30634033	Gene ID= ENSG00000106105.13 TPM= 168.61 Transcript Type= protein_coding
chr7	30752135	30757602	30752135	30757602	+	ENST00000013222.5@INMT	ENST00000013222.5	protein_coding	30752135,30753731,30755422	30752304,30753938,30757602	Gene ID= ENSG00000241644.2 TPM= 4.83 Transcript Type= protein_coding
chr7	30911694	30925516	30911694	30925516	+	ENST00000311813.9@AQP1	ENST00000311813.9	protein_coding	30911694,30922066,30922564,30923450	30912293,30922230,30922644,30925516	Gene ID= ENSG00000240583.11 TPM= 220.09 Transcript Type= protein_coding
chr7	32485332	32490418	32485332	32490418	-	ENST00000450169.6@LSM5	ENST00000450169.6	protein_coding	32490320,32489249,32488625,32487685,32485332	32490418,32489344,32488652,32487757,32487293	Gene ID= ENSG00000106355.9 TPM= 13.51 Transcript Type= protein_coding
chr7	32495489	32588721	32495489	32588721	+	ENST00000318709.8@AVL9	ENST00000318709.8	protein_coding	32495489,32543141,32544694,32548847,32551334,32552229,32553727,32554558,32558559,32558929,32570020,32573199,32575955,32580219,32580802,32583792	32495802,32543261,32544779,32548918,32551423,32552295,32553767,32554596,32558628,32559464,32570154,32573418,32576072,32580272,32580890,32588721	Gene ID= ENSG00000105778.18 TPM= 1.93 Transcript Type= protein_coding
chr7	32868172	32891897	32868172	32891897	-	ENST00000304056.8@KBTBD2	ENST00000304056.8	protein_coding	32891536,32879435,32874992,32868172	32891897,32879942,32875157,32870880	Gene ID= ENSG00000170852.10 TPM= 56.63 Transcript Type= protein_coding
chr7	32868172	32891760	32868172	32891760	-	transcript1094.chr7.nic@KBTBD2	transcript1094.chr7.nic	protein_coding	32891536,32879701,32874992,32868172	32891760,32879942,32875157,32870880	Gene ID= ENSG00000170852.10 TPM= 4.51 Transcript Type= NA
chr7	32868172	32891765	32868172	32891765	-	transcript1099.chr7.nnic@KBTBD2	transcript1099.chr7.nnic	protein_coding	32891536,32874992,32868172	32891765,32875157,32870880	Gene ID= ENSG00000170852.10 TPM= 8.37 Transcript Type= NA
chr7	32916815	32943195	32916815	32943195	-	transcript1109.chr7.nic@RP9P	transcript1109.chr7.nic	transcribed_unprocessed_pseudogene	32942870,32930078,32921339,32918311,32916815	32943195,32930108,32921430,32918372,32917542	Gene ID= ENSG00000205763.13 TPM= 1.93 Transcript Type= NA
chr7	32916815	32943232	32916815	32943232	-	transcript1111.chr7.nnic@RP9P	transcript1111.chr7.nnic	transcribed_unprocessed_pseudogene	32942870,32933814,32930078,32921339,32916815	32943232,32933896,32930108,32921430,32917542	Gene ID= ENSG00000205763.13 TPM= 4.83 Transcript Type= NA
chr7	32917421	32943164	32917421	32943164	-	transcript1113.chr7.nnic@RP9P	transcript1113.chr7.nnic	transcribed_unprocessed_pseudogene	32942870,32933814,32930078,32918311,32917421	32943164,32933896,32930108,32918372,32917542	Gene ID= ENSG00000205763.13 TPM= 2.41 Transcript Type= NA
chr7	32916815	32943195	32916815	32943195	-	transcript1116.chr7.nnic@RP9P	transcript1116.chr7.nnic	transcribed_unprocessed_pseudogene	32942870,32930078,32921339,32916815	32943195,32930108,32921430,32917542	Gene ID= ENSG00000205763.13 TPM= 8.69 Transcript Type= NA
chr7	32916815	32943176	32916815	32943176	-	ENST00000381639.3@RP9P	ENST00000381639.3	transcribed_unprocessed_pseudogene	32942870,32933814,32930078,32921339,32918311,32916815	32943176,32933896,32930108,32921430,32918372,32917542	Gene ID= ENSG00000205763.13 TPM= 2.9 Transcript Type= processed_transcript
chr7	32957404	33006930	32957404	33006930	+	ENST00000538336.5@FKBP9	ENST00000538336.5	protein_coding	32957404,32963544,32974617,32975182,32976354,32980364,32988507,32996163,33000115,33002676,33005175	32957794,32963702,32974762,32975371,32976499,32980553,32988652,32996349,33000260,33002839,33006930	Gene ID= ENSG00000122642.10 TPM= 8.21 Transcript Type= protein_coding
chr7	32957405	33006931	32957405	33006931	+	ENST00000242209.8@FKBP9	ENST00000242209.8	protein_coding	32957405,32974617,32975182,32976354,32980364,32988507,32996163,33000115,33002676,33005175	32957794,32974762,32975371,32976499,32980553,32988652,32996349,33000260,33002839,33006931	Gene ID= ENSG00000122642.10 TPM= 59.37 Transcript Type= protein_coding
chr7	33014114	33041165	33014114	33041165	-	ENST00000381626.6@NT5C3A	ENST00000381626.6	protein_coding	33040872,33035934,33029629,33026817,33024039,33022053,33021272,33019635,33017439,33015670,33014114	33041165,33035988,33029714,33026915,33024108,33022099,33021357,33019724,33017601,33015870,33014831	Gene ID= ENSG00000122643.18 TPM= 4.34 Transcript Type= protein_coding
chr7	33014139	33041155	33014139	33041155	-	ENST00000396152.6@NT5C3A	ENST00000396152.6	protein_coding	33040872,33035934,33026817,33024039,33022053,33021272,33019635,33017439,33015670,33014139	33041155,33035988,33026915,33024108,33022099,33021357,33019724,33017601,33015870,33014831	Gene ID= ENSG00000122643.18 TPM= 16.89 Transcript Type= protein_coding
chr7	33083312	33109451	33083312	33109451	-	transcript1135.chr7.nnic@RP9	transcript1135.chr7.nnic	protein_coding	33109221,33100531,33099307,33097271,33096493,33094797,33083312	33109451,33100561,33099436,33097362,33096554,33095432,33083318	Gene ID= ENSG00000164610.8 TPM= 1.93 Transcript Type= NA
chr7	33095299	33109433	33095299	33109433	-	transcript1137.chr7.nnic@RP9	transcript1137.chr7.nnic	protein_coding	33109221,33103694,33100531,33099307,33097271,33096493,33095299	33109433,33103818,33100561,33099436,33097362,33096554,33095432	Gene ID= ENSG00000164610.8 TPM= 2.9 Transcript Type= NA
chr7	33094797	33109390	33094797	33109390	-	ENST00000297157.7@RP9	ENST00000297157.7	protein_coding	33109221,33100531,33099307,33097271,33096493,33094797	33109390,33100561,33099436,33097362,33096554,33095432	Gene ID= ENSG00000164610.8 TPM= 45.37 Transcript Type= protein_coding
chr7	33129532	33606068	33129532	33606068	+	ENST00000242067.10@BBS9	ENST00000242067.10	protein_coding	33129532,33146242,33152701,33155638,33177478,33257236,33264290,33273012,33273827,33336441,33340897,33344581,33349068,33351219,33352859,33357855,33367767,33383666,33387992,33505463,33533954,33604865,33605195	33130041,33146364,33152851,33155702,33177591,33257410,33264374,33273195,33273956,33336622,33340973,33344634,33349170,33351323,33352873,33357995,33367862,33383838,33388144,33505645,33534176,33604975,33606068	Gene ID= ENSG00000122507.20 TPM= 4.83 Transcript Type= protein_coding
chr7	33904911	34155872	33904911	34155872	+	ENST00000297161.6@BMPER	ENST00000297161.6	protein_coding	33904911,33905474,33906818,33937289,33966479,33970329,33974702,34046306,34051861,34055163,34058059,34062002,34078857,34085756,34143230,34153092	33905144,33905746,33906903,33937388,33966561,33970419,33974784,34046405,34051970,34055303,34058163,34062047,34079186,34086092,34143360,34155872	Gene ID= ENSG00000164619.8 TPM= 4.83 Transcript Type= protein_coding
chr7	34928876	35037525	34928876	35037525	-	ENST00000638088.1@DPY19L1	ENST00000638088.1	protein_coding	35037097,35018572,35017882,35013568,35011330,35010468,34989884,34973514,34969433,34966894,34957984,34955308,34954698,34949797,34947630,34945667,34942615,34941765,34940153,34939276,34937994,34928876	35037525,35018596,35017969,35013705,35011450,35010561,34989941,34973605,34969532,34966971,34958070,34955367,34954778,34949898,34947701,34945716,34942639,34941884,34940327,34939375,34938119,34931729	Gene ID= ENSG00000173852.14 TPM= 2.9 Transcript Type= protein_coding
chr7	35632659	35695135	35632659	35695135	-	ENST00000396081.5@HERPUD2	ENST00000396081.5	protein_coding	35694184,35673201,35670215,35667434,35638350,35635135,35634312,35632659	35695135,35673278,35670328,35667588,35638472,35635458,35634429,35633851	Gene ID= ENSG00000122557.9 TPM= 7.72 Transcript Type= protein_coding
chr7	35695217	35698184	35695217	35698184	+	transcript1170.chr7.nnic@NA	transcript1170.chr7.nnic	NA	35695217	35698184	Gene ID= novel_gene_chr7_1171 TPM= 4.83 Transcript Type= NA
chr7	35800932	35907105	35800932	35907105	+	ENST00000399034.7@SEPT7	ENST00000399034.7	protein_coding	35800932,35832798,35863552,35872666,35873641,35879823,35882484,35883891,35885828,35890668,35898248,35903076,35904254	35801270,35832900,35863658,35872766,35873775,35879940,35882576,35883987,35885879,35890793,35898383,35903215,35907105	Gene ID= ENSG00000122545.18 TPM= 97.5 Transcript Type= protein_coding
chr7	36854361	37449249	36854361	37449249	-	ENST00000310758.8@ELMO1	ENST00000310758.8	protein_coding	37448675,37342613,37315920,37314850,37271832,37259181,37244356,37233095,37224879,37222615,37216645,37213335,37211386,37133130,37096619,37013299,36894854,36887560,36878010,36870393,36861659,36854361	37449249,37342763,37315960,37314922,37271882,37259350,37244391,37233194,37225030,37222693,37216695,37213457,37211517,37133234,37096727,37013435,36895017,36887672,36878117,36870475,36861736,36855751	Gene ID= ENSG00000155849.15 TPM= 1.93 Transcript Type= protein_coding
chr7	37920561	37951941	37920561	37951941	+	ENST00000199448.8@EPDR1	ENST00000199448.8	protein_coding	37920561,37948840,37950200	37921208,37949048,37951941	Gene ID= ENSG00000086289.11 TPM= 67.57 Transcript Type= protein_coding
chr7	38178222	38230671	38178222	38230671	+	ENST00000009041.11@STARD3NL	ENST00000009041.11	protein_coding	38178222,38207447,38214357,38215028,38217025,38217188,38219565,38228799,38229923	38178420,38207729,38214434,38215105,38217078,38217305,38219660,38228871,38230671	Gene ID= ENSG00000010270.13 TPM= 15.44 Transcript Type= protein_coding
chr7	38795235	38909191	38795235	38909191	-	transcript1233.chr7.nic@VPS41	transcript1233.chr7.nic	protein_coding	38909154,38898091,38869146,38862545,38830254,38821203,38817817,38796745,38795235	38909191,38898129,38869253,38862622,38830328,38821265,38817882,38796864,38795611	Gene ID= ENSG00000006715.15 TPM= 1.93 Transcript Type= NA
chr7	39566376	39572881	39566376	39572881	+	ENST00000223273.6@YAE1D1	ENST00000223273.6	protein_coding	39566376,39570506,39572277	39566547,39570627,39572881	Gene ID= ENSG00000241127.7 TPM= 4.83 Transcript Type= protein_coding
chr7	39623616	39708124	39623616	39708124	+	transcript1242.chr7.nnic@RALA	transcript1242.chr7.nnic	protein_coding	39623616,39665226,39686631,39690382,39696685,39706123	39623825,39665290,39686781,39690590,39696859,39708124	Gene ID= ENSG00000006451.7 TPM= 3.38 Transcript Type= NA
chr7	39623483	39708124	39623483	39708124	+	ENST00000005257.6@RALA	ENST00000005257.6	protein_coding	39623483,39686631,39690382,39696685,39706123	39623825,39686781,39690590,39696859,39708124	Gene ID= ENSG00000006451.7 TPM= 21.72 Transcript Type= protein_coding
chr7	39949768	39998471	39949768	39998471	+	transcript1255.chr7.nic@CDK13	transcript1255.chr7.nic	protein_coding	39949768,39987599,39997494	39951852,39988258,39998471	Gene ID= ENSG00000065883.14 TPM= 3.21 Transcript Type= NA
chr7	41964018	41965909	41964018	41965909	-	transcript1266.chr7.nnic@NA	transcript1266.chr7.nnic	NA	41964018	41965909	Gene ID= novel_gene_chr7_1267 TPM= 1.93 Transcript Type= NA
chr7	42916857	42932223	42916857	42932223	-	ENST00000223321.8@PSMA2	ENST00000223321.8	protein_coding	42932118,42927383,42926536,42924675,42923325,42921858,42917778,42916857	42932223,42927459,42926668,42924797,42923406,42921931,42917835,42917690	Gene ID= ENSG00000106588.10 TPM= 64.68 Transcript Type= protein_coding
chr7	42917413	42932185	42917413	42932185	-	ENST00000445517.1@PSMA2	ENST00000445517.1	protein_coding	42932118,42924675,42923325,42921858,42917778,42917413	42932185,42924797,42923406,42921931,42917835,42917690	Gene ID= ENSG00000106588.10 TPM= 2.9 Transcript Type= protein_coding
chr7	42932358	42937857	42932358	42937857	+	transcript1281.chr7.nnic@MRPL32	transcript1281.chr7.nnic	protein_coding	42932358,42934955,42935846,42937322	42932516,42935136,42935915,42937857	Gene ID= ENSG00000106591.3 TPM= 1.93 Transcript Type= NA
chr7	42932358	42937857	42932358	42937857	+	transcript1285.chr7.nic@MRPL32	transcript1285.chr7.nic	protein_coding	42932358,42934955,42937164,42937322	42932516,42935136,42937241,42937857	Gene ID= ENSG00000106591.3 TPM= 2.9 Transcript Type= NA
chr7	42932358	42937857	42932358	42937857	+	transcript1287.chr7.nnic@MRPL32	transcript1287.chr7.nnic	protein_coding	42932358,42934955,42935846	42932516,42935136,42937857	Gene ID= ENSG00000106591.3 TPM= 2.9 Transcript Type= NA
chr7	42932200	42937857	42932200	42937857	+	ENST00000223324.2@MRPL32	ENST00000223324.2	protein_coding	42932200,42934955,42937322	42932516,42935136,42937857	Gene ID= ENSG00000106591.3 TPM= 39.58 Transcript Type= protein_coding
chr7	42932358	42937857	42932358	42937857	+	transcript1290.chr7.nic@MRPL32	transcript1290.chr7.nic	protein_coding	42932358,42934955	42932516,42937857	Gene ID= ENSG00000106591.3 TPM= 5.79 Transcript Type= NA
chr7	43583065	43626786	43583065	43626786	+	ENST00000319357.5@STK17A	ENST00000319357.5	protein_coding	43583065,43595901,43608256,43619597,43623572,43623709,43624518	43583449,43596113,43608400,43619723,43623620,43623888,43626786	Gene ID= ENSG00000164543.5 TPM= 1.93 Transcript Type= protein_coding
chr7	43631154	43729544	43631154	43729544	-	transcript1295.chr7.nnic@COA1	transcript1295.chr7.nnic	protein_coding	43729429,43648600,43647535,43645251,43640573,43639449,43631154	43729544,43648652,43647634,43645399,43640649,43639681,43631782	Gene ID= ENSG00000106603.18 TPM= 1.93 Transcript Type= NA
chr7	43639257	43729491	43639257	43729491	-	transcript1297.chr7.nic@COA1	transcript1297.chr7.nic	protein_coding	43729429,43665658,43648600,43647535,43645251,43640573,43639257	43729491,43665722,43648652,43647634,43645399,43640649,43639681	Gene ID= ENSG00000106603.18 TPM= 3.54 Transcript Type= NA
chr7	43639257	43729506	43639257	43729506	-	transcript1298.chr7.nic@COA1	transcript1298.chr7.nic	protein_coding	43729429,43711400,43648600,43647535,43645251,43640573,43639257	43729506,43711449,43648652,43647634,43645399,43640649,43639681	Gene ID= ENSG00000106603.18 TPM= 2.58 Transcript Type= NA
chr7	43639247	43729541	43639247	43729541	-	ENST00000223336.10@COA1	ENST00000223336.10	protein_coding	43729429,43648600,43647535,43645251,43640573,43639247	43729541,43648652,43647634,43645399,43640649,43639681	Gene ID= ENSG00000106603.18 TPM= 39.26 Transcript Type= protein_coding
chr7	43758687	43807342	43758687	43807342	+	ENST00000402924.5@BLVRA	ENST00000402924.5	protein_coding	43758687,43760017,43771138,43787904,43791249,43792715,43800465,43803676,43806977	43758734,43760110,43771170,43788025,43791368,43792812,43800572,43803847,43807342	Gene ID= ENSG00000106605.10 TPM= 5.79 Transcript Type= protein_coding
chr7	43758680	43807339	43758680	43807339	+	ENST00000265523.8@BLVRA	ENST00000265523.8	protein_coding	43758680,43771138,43787904,43791249,43792715,43800465,43803676,43806977	43758734,43771170,43788025,43791368,43792812,43800572,43803847,43807339	Gene ID= ENSG00000106605.10 TPM= 59.85 Transcript Type= protein_coding
chr7	43866562	43869517	43866562	43869517	-	ENST00000418740.5@MRPS24	ENST00000418740.5	protein_coding	43869308,43868963,43866562	43869517,43869074,43866982	Gene ID= ENSG00000062582.13 TPM= 41.99 Transcript Type= protein_coding
chr7	43866558	43869557	43866558	43869557	-	ENST00000317534.5@MRPS24	ENST00000317534.5	protein_coding	43869457,43869308,43868963,43866558	43869557,43869376,43869074,43866982	Gene ID= ENSG00000062582.13 TPM= 235.54 Transcript Type= protein_coding
chr7	43875915	43907069	43875915	43907069	-	ENST00000453200.5@URGCP	ENST00000453200.5	protein_coding	43906562,43887790,43887415,43881907,43881659,43875915	43907069,43887816,43887485,43881957,43881697,43879260	Gene ID= ENSG00000106608.16 TPM= 111.01 Transcript Type= protein_coding
chr7	43875913	43906615	43875913	43906615	-	ENST00000402306.7@URGCP	ENST00000402306.7	protein_coding	43906562,43887415,43881907,43881659,43875913	43906615,43887485,43881957,43881697,43879260	Gene ID= ENSG00000106608.16 TPM= 44.4 Transcript Type= protein_coding
chr7	43926444	43956136	43926444	43956136	+	ENST00000222402.7@UBE2D4	ENST00000222402.7	protein_coding	43926444,43938431,43942826,43942954,43948632,43950599,43952650	43926556,43938494,43942857,43943031,43948737,43950692,43956136	Gene ID= ENSG00000078967.12 TPM= 88.81 Transcript Type= protein_coding
chr7	43984502	44019172	43984502	44019172	-	transcript1335.chr7.nnic@POLR2J4	transcript1335.chr7.nnic	processed_transcript	44019061,44016434,44013593,43988086,43987678,43986601,43986192,43984502	44019172,44016523,44013679,43988247,43987888,43986677,43986315,43985103	Gene ID= ENSG00000214783.9 TPM= 1.93 Transcript Type= NA
chr7	44013562	44019170	44013562	44019170	-	ENST00000326391.6@POLR2J4	ENST00000326391.6	transcribed_unprocessed_pseudogene	44019061,44016434,44013562	44019170,44016523,44014783	Gene ID= ENSG00000272655.2 TPM= 10.62 Transcript Type= processed_transcript
chr7	44044681	44061609	44044681	44061609	+	transcript1356.chr7.nic@DBNL	transcript1356.chr7.nic	protein_coding	44044681,44050225,44051830,44052867,44056757,44057782,44058129,44058432,44058902,44059354,44059543,44060048,44060777	44044866,44050280,44051942,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061609	Gene ID= ENSG00000136279.20 TPM= 2.9 Transcript Type= NA
chr7	44044640	44061716	44044640	44061716	+	transcript1363.chr7.nnic@DBNL	transcript1363.chr7.nnic	protein_coding	44044640,44050225,44052911,44056757,44057782,44058129,44058432,44058902,44059354,44059543,44060048,44060777	44044820,44050251,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061716	Gene ID= ENSG00000136279.20 TPM= 4.83 Transcript Type= NA
chr7	44044717	44061716	44044717	44061716	+	ENST00000494774.5@DBNL	ENST00000494774.5	protein_coding	44044717,44050225,44051830,44052867,44056757,44057782,44058129,44058429,44058902,44059354,44059543,44060048,44060777	44044820,44050280,44051942,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061716	Gene ID= ENSG00000136279.20 TPM= 25.1 Transcript Type= protein_coding
chr7	44044640	44061333	44044640	44061333	+	ENST00000448521.5@DBNL	ENST00000448521.5	protein_coding	44044640,44050225,44051830,44052867,44056757,44057782,44058129,44058432,44058902,44059354,44059543,44060048,44060777	44044820,44050280,44051942,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061333	Gene ID= ENSG00000136279.20 TPM= 1.93 Transcript Type= protein_coding
chr7	44044711	44061637	44044711	44061637	+	ENST00000468694.5@DBNL	ENST00000468694.5	protein_coding	44044711,44050225,44051830,44052867,44056757,44057782,44058129,44058429,44058878,44059354,44059543,44060048,44060777	44044820,44050280,44051942,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061637	Gene ID= ENSG00000136279.20 TPM= 14.48 Transcript Type= protein_coding
chr7	44062727	44065567	44062727	44065567	-	transcript1374.chr7.nnic@PGAM2	transcript1374.chr7.nnic	protein_coding	44065116,44062727	44065567,44062930	Gene ID= ENSG00000164708.5 TPM= 11.58 Transcript Type= NA
chr7	44062727	44065587	44062727	44065587	-	ENST00000297283.3@PGAM2	ENST00000297283.3	protein_coding	44065116,44064832,44062727	44065587,44065012,44062930	Gene ID= ENSG00000164708.5 TPM= 762.6 Transcript Type= protein_coding
chr7	44072247	44082540	44072247	44082540	-	ENST00000242248.9@POLM	ENST00000242248.9	protein_coding	44082251,44080733,44079861,44079571,44078740,44076509,44074398,44074131,44073783,44073625,44072247	44082540,44080916,44079959,44079741,44078811,44076629,44074530,44074233,44074025,44073708,44073377	Gene ID= ENSG00000122678.16 TPM= 5.79 Transcript Type= protein_coding
chr7	44111205	44114559	44111205	44114559	+	ENST00000413907.1@AEBP1	ENST00000413907.1	protein_coding	44111205,44111507,44111854,44112206,44112558,44112991,44113252,44113594	44111239,44111772,44112050,44112321,44112909,44113130,44113351,44114559	Gene ID= ENSG00000106624.10 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr7	44104361	44114560	44104361	44114560	+	ENST00000223357.7@AEBP1	ENST00000223357.7	protein_coding	44104361,44106546,44107439,44107629,44107809,44108007,44108899,44109107,44109288,44110015,44110207,44110725,44110913,44111154,44111507,44111854,44112142,44112558,44112991,44113252,44113594	44104918,44106887,44107510,44107700,44107931,44108084,44108976,44109184,44109341,44110124,44110346,44110809,44111057,44111239,44111630,44112050,44112321,44112909,44113130,44113351,44114560	Gene ID= ENSG00000106624.10 TPM= 3.86 Transcript Type= protein_coding
chr7	44114687	44123580	44114687	44123580	-	transcript1380.chr7.nic@POLD2	transcript1380.chr7.nic	protein_coding	44123511,44121834,44117943,44117619,44117133,44116817,44116430,44116115,44115766,44115295,44114687	44123580,44122109,44118064,44117742,44117247,44117015,44116510,44116272,44115893,44115354,44114945	Gene ID= ENSG00000106628.10 TPM= 7.72 Transcript Type= NA
chr7	44114687	44123580	44114687	44123580	-	transcript1381.chr7.nnic@POLD2	transcript1381.chr7.nnic	protein_coding	44123511,44121834,44117943,44117619,44117133,44116817,44116430,44116115,44115766,44115295,44114687	44123580,44122109,44118064,44117742,44117247,44117015,44116510,44116206,44115893,44115396,44114945	Gene ID= ENSG00000106628.10 TPM= 5.96 Transcript Type= NA
chr7	44114687	44123547	44114687	44123547	-	transcript1384.chr7.nnic@POLD2	transcript1384.chr7.nnic	protein_coding	44123511,44121834,44117943,44117619,44117133,44116817,44116430,44116115,44115766,44115295,44114687	44123547,44122195,44118064,44117742,44117247,44117015,44116510,44116272,44115893,44115396,44114945	Gene ID= ENSG00000106628.10 TPM= 29.61 Transcript Type= NA
chr7	44114681	44123559	44114681	44123559	-	ENST00000610533.4@POLD2	ENST00000610533.4	protein_coding	44123511,44121834,44117943,44117619,44117133,44116817,44116430,44116115,44115766,44115295,44114681	44123559,44122109,44118064,44117742,44117247,44117015,44116510,44116272,44115893,44115396,44114945	Gene ID= ENSG00000106628.10 TPM= 133.38 Transcript Type= protein_coding
chr7	44201012	44212595	44201012	44212595	+	ENST00000447123.5@YKT6	ENST00000447123.5	protein_coding	44201012,44204568,44206385,44207388,44208133,44211023,44211554,44212247	44201239,44204650,44206485,44207492,44208198,44211124,44211604,44212595	Gene ID= ENSG00000106636.7 TPM= 3.86 Transcript Type= processed_transcript
chr7	44219346	44325631	44219346	44325631	-	transcript1416.chr7.nnic@CAMK2B	transcript1416.chr7.nnic	protein_coding	44325357,44284131,44263005,44258872,44254542,44247120,44243425,44243250,44242560,44242218,44241700,44240707,44239589,44234639,44234390,44232822,44231006,44229388,44228796,44226516,44225763,44220826,44220616,44220060,44219346	44325631,44284225,44263064,44258926,44254607,44247192,44243527,44243333,44242654,44242340,44241783,44240749,44239663,44234676,44234461,44232866,44231054,44229501,44228924,44226644,44225891,44220901,44220710,44220294,44219522	Gene ID= ENSG00000058404.19 TPM= 7.72 Transcript Type= NA
chr7	44217156	44325498	44217156	44325498	-	ENST00000395749.6@CAMK2B	ENST00000395749.6	protein_coding	44325357,44284131,44263005,44258872,44254542,44247120,44243425,44243250,44242560,44242218,44241700,44240707,44239589,44234639,44234390,44232822,44231006,44229388,44228796,44226516,44220826,44220616,44220060,44217156	44325498,44284225,44263064,44258926,44254607,44247192,44243527,44243333,44242654,44242340,44241783,44240749,44239663,44234676,44234461,44232866,44231054,44229501,44228924,44226644,44220901,44220710,44220294,44219522	Gene ID= ENSG00000058404.19 TPM= 59.85 Transcript Type= protein_coding
chr7	44379121	44490880	44379121	44490880	-	ENST00000355451.7@NUDCD3	ENST00000355451.7	protein_coding	44490409,44484968,44427571,44404440,44392297,44379121	44490880,44485284,44427703,44404583,44392485,44386121	Gene ID= ENSG00000015676.17 TPM= 47.3 Transcript Type= protein_coding
chr7	44387168	44391574	44387168	44391574	-	transcript1459.chr7.nnic@NA	transcript1459.chr7.nnic	NA	44387168	44391574	Gene ID= novel_gene_chr7_1460 TPM= 1.93 Transcript Type= NA
chr7	44489913	44490640	44489913	44490640	-	transcript1457.chr7.nnic@NA	transcript1457.chr7.nnic	NA	44489913	44490640	Gene ID= novel_gene_chr7_1458 TPM= 7.72 Transcript Type= NA
chr7	44565417	44574002	44565417	44574002	-	ENST00000258772.9@DDX56	ENST00000258772.9	protein_coding	44573836,44573583,44572890,44572574,44572347,44571492,44570758,44570015,44569809,44569130,44568903,44568118,44566448,44565417	44574002,44573744,44573050,44572744,44572437,44571736,44570877,44570128,44569903,44569203,44568992,44568223,44566524,44566079	Gene ID= ENSG00000136271.10 TPM= 7.72 Transcript Type= protein_coding
chr7	44565804	44573908	44565804	44573908	-	transcript1469.chr7.nic@DDX56	transcript1469.chr7.nic	protein_coding	44573836,44573583,44572890,44572574,44572347,44571492,44570758,44570015,44569130,44568903,44568118,44566448,44565804	44573908,44573744,44573050,44572744,44572437,44571736,44570877,44570128,44569903,44568992,44568223,44566524,44566079	Gene ID= ENSG00000136271.10 TPM= 2.9 Transcript Type= NA
chr7	44565804	44573895	44565804	44573895	-	ENST00000446987.5@DDX56	ENST00000446987.5	protein_coding	44573836,44573583,44572890,44572563,44572347,44571492,44570758,44570015,44569809,44569130,44568903,44568118,44566448,44565804	44573895,44573744,44573050,44572744,44572437,44571736,44570877,44570128,44569903,44569203,44568992,44568223,44566524,44566079	Gene ID= ENSG00000136271.10 TPM= 95.57 Transcript Type= nonsense_mediated_decay
chr7	44577894	44582259	44577894	44582259	-	ENST00000457408.6@TMED4	ENST00000457408.6	protein_coding	44582047,44581723,44581449,44581093,44577894	44582259,44581823,44581574,44581239,44579628	Gene ID= ENSG00000158604.14 TPM= 23.65 Transcript Type= protein_coding
chr7	44578311	44582242	44578311	44582242	-	transcript1479.chr7.nic@TMED4	transcript1479.chr7.nic	protein_coding	44581723,44581449,44581093,44578311	44582242,44581574,44581239,44579628	Gene ID= ENSG00000158604.14 TPM= 4.34 Transcript Type= NA
chr7	44579897	44582231	44579897	44582231	-	ENST00000481238.1@TMED4	ENST00000481238.1	protein_coding	44582047,44581723,44581449,44579897	44582231,44581823,44581574,44581239	Gene ID= ENSG00000158604.14 TPM= 5.79 Transcript Type= protein_coding
chr7	44694154	44709066	44694154	44709066	+	transcript1494.chr7.nnic@OGDH	transcript1494.chr7.nnic	protein_coding	44694154,44694424,44696025,44696429,44696914,44697370,44697604,44698192,44700141,44701543,44707225,44707582,44707879	44694291,44694576,44696127,44696557,44697064,44697497,44697782,44698263,44700269,44701615,44707388,44707736,44709066	Gene ID= ENSG00000105953.14 TPM= 21.4 Transcript Type= NA
chr7	44694152	44709066	44694152	44709066	+	transcript1497.chr7.nic@OGDH	transcript1497.chr7.nic	protein_coding	44694152,44696025,44696429,44696914,44697370,44697604,44698192,44700141,44701543,44707225,44707582,44707879	44694576,44696127,44696557,44697064,44697497,44697782,44698263,44700269,44701615,44707388,44707736,44709066	Gene ID= ENSG00000105953.14 TPM= 22.85 Transcript Type= NA
chr7	44606588	44676594	44606588	44676594	+	ENST00000443864.6@OGDH	ENST00000443864.6	protein_coding	44606588,44624317,44645327,44647657,44666736,44673787,44674411,44675178,44675970	44606653,44624565,44645518,44647759,44666851,44673941,44674557,44675268,44676594	Gene ID= ENSG00000105953.14 TPM= 2.9 Transcript Type= protein_coding
chr7	44606628	44708994	44606628	44708994	+	ENST00000631326.2@OGDH	ENST00000631326.2	protein_coding	44606628,44624317,44645327,44647657,44666736,44673787,44674411,44675178,44675970,44681720,44693825,44694424,44696025,44696429,44696914,44697370,44697603,44697611,44697624,44698192,44700141,44701543,44707225,44707582,44707879,44707935	44606653,44624565,44645518,44647759,44666851,44673941,44674557,44675268,44676149,44681848,44694004,44694576,44696127,44696557,44697064,44697497,44697607,44697622,44697782,44698263,44700269,44701615,44707388,44707736,44707933,44708994	Gene ID= ENSG00000105953.14 TPM= 25.74 Transcript Type= protein_coding
chr7	44606639	44709066	44606639	44709066	+	ENST00000222673.5@OGDH	ENST00000222673.5	protein_coding	44606639,44624317,44645327,44647657,44666736,44673787,44674411,44675178,44675970,44681720,44693825,44694424,44696025,44696429,44696914,44697370,44697604,44698192,44700141,44701543,44707225,44707582,44707879	44606653,44624565,44645518,44647759,44666851,44673941,44674557,44675268,44676149,44681848,44694004,44694576,44696127,44696557,44697064,44697497,44697782,44698263,44700269,44701615,44707388,44707736,44709066	Gene ID= ENSG00000105953.14 TPM= 243.58 Transcript Type= protein_coding
chr7	44606907	44607697	44606907	44607697	+	transcript1502.chr7.nnic@NA	transcript1502.chr7.nnic	NA	44606907	44607697	Gene ID= novel_gene_chr7_1503 TPM= 4.83 Transcript Type= NA
chr7	44768396	44771148	44768396	44771148	+	transcript1511.chr7.nnic@NA	transcript1511.chr7.nnic	NA	44768396	44771148	Gene ID= novel_gene_chr7_1512 TPM= 1.93 Transcript Type= NA
chr7	44795111	44796386	44795111	44796386	-	transcript1513.chr7.nnic@NA	transcript1513.chr7.nnic	NA	44795111	44796386	Gene ID= novel_gene_chr7_1514 TPM= 1.93 Transcript Type= NA
chr7	44796681	44801630	44796681	44801630	+	ENST00000489459.5@PPIA	ENST00000489459.5	protein_coding	44796681,44798748,44799247,44799392,44799702,44801287	44796793,44798904,44799277,44799480,44799874,44801630	Gene ID= ENSG00000196262.13 TPM= 7.72 Transcript Type= protein_coding
chr7	44796680	44803117	44796680	44803117	+	ENST00000468812.5@PPIA	ENST00000468812.5	protein_coding	44796680,44799247,44799392,44799702,44801287	44796793,44799277,44799480,44799874,44803117	Gene ID= ENSG00000196262.13 TPM= 71.43 Transcript Type= protein_coding
chr7	44826791	44848077	44826791	44848077	-	ENST00000222690.10@H2AFV	ENST00000222690.10	protein_coding	44847969,44843277,44840899,44835529,44826791	44848077,44843354,44841012,44835658,44830163	Gene ID= ENSG00000105968.18 TPM= 42.47 Transcript Type= protein_coding
chr7	44834228	44848063	44834228	44848063	-	ENST00000308153.8@H2AFV	ENST00000308153.8	protein_coding	44847969,44843277,44840899,44835529,44834228	44848063,44843354,44841012,44835658,44834562	Gene ID= ENSG00000105968.18 TPM= 18.34 Transcript Type= protein_coding
chr7	44834239	44848080	44834239	44848080	-	ENST00000381124.9@H2AFV	ENST00000381124.9	protein_coding	44847969,44843277,44840899,44834239	44848080,44843354,44841012,44834562	Gene ID= ENSG00000105968.18 TPM= 1.93 Transcript Type= protein_coding
chr7	44834228	44848076	44834228	44848076	-	ENST00000350771.7@H2AFV	ENST00000350771.7	protein_coding	44847969,44840899,44835529,44834228	44848076,44841012,44835658,44834562	Gene ID= ENSG00000105968.18 TPM= 1.93 Transcript Type= protein_coding
chr7	44882938	44885506	44882938	44885506	-	transcript1542.chr7.nnic@NA	transcript1542.chr7.nnic	NA	44882938	44885506	Gene ID= novel_gene_chr7_1543 TPM= 90.74 Transcript Type= NA
chr7	44962666	44979098	44962666	44979098	-	ENST00000258787.11@MYO1G	ENST00000258787.11	protein_coding	44978867,44976863,44976564,44975484,44975174,44972115,44971673,44970835,44970592,44970040,44969705,44969413,44967884,44967605,44966672,44966073,44965637,44964945,44964415,44964049,44962970,44962666	44979098,44977071,44976657,44975649,44975227,44972225,44971789,44971059,44970737,44970154,44969875,44969483,44967958,44967737,44966838,44966280,44965860,44965089,44964519,44964162,44963124,44962895	Gene ID= ENSG00000136286.14 TPM= 1.93 Transcript Type= protein_coding
chr7	44983023	44986834	44983023	44986834	-	ENST00000578968.5@SNHG15	ENST00000578968.5	lincRNA	44986525,44986021,44984357,44983822,44983023	44986834,44986097,44984426,44984046,44983322	Gene ID= ENSG00000232956.8 TPM= 20.27 Transcript Type= lincRNA
chr7	44983026	44986686	44983026	44986686	-	transcript1551.chr7.nic@SNHG15	transcript1551.chr7.nic	lincRNA	44986525,44983822,44983026	44986686,44986097,44983322	Gene ID= ENSG00000232956.8 TPM= 1.93 Transcript Type= NA
chr7	44983026	44986669	44983026	44986669	-	ENST00000585030.5@SNHG15	ENST00000585030.5	lincRNA	44986525,44985882,44984357,44983822,44983026	44986669,44986097,44984426,44984046,44983322	Gene ID= ENSG00000232956.8 TPM= 1.93 Transcript Type= lincRNA
chr7	45000181	45076453	45000181	45076453	+	transcript1566.chr7.nic@CCM2	transcript1566.chr7.nic	protein_coding	45000181,45038253,45063918,45064463,45068443,45069826,45071750,45072726,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45068579,45069961,45071872,45072783,45073571,45074408,45076453	Gene ID= ENSG00000136280.15 TPM= 13.22 Transcript Type= NA
chr7	45000185	45076467	45000185	45076467	+	ENST00000258781.10@CCM2	ENST00000258781.10	protein_coding	45000185,45038253,45063918,45064463,45068443,45069826,45072726,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45068579,45069961,45072783,45073571,45074408,45076467	Gene ID= ENSG00000136280.15 TPM= 89.1 Transcript Type= protein_coding
chr7	45000188	45076469	45000188	45076469	+	ENST00000541586.5@CCM2	ENST00000541586.5	protein_coding	45000188,45063918,45064463,45068443,45069826,45072726,45073460,45074270,45075777	45000363,45064001,45064646,45068579,45069961,45072783,45073571,45074408,45076469	Gene ID= ENSG00000136280.15 TPM= 28.12 Transcript Type= protein_coding
chr7	45000181	45076453	45000181	45076453	+	transcript1605.chr7.nnic@CCM2	transcript1605.chr7.nnic	protein_coding	45000181,45038253,45069826,45072726,45073460,45074270,45075777	45000363,45038426,45069961,45072783,45073571,45074408,45076453	Gene ID= ENSG00000136280.15 TPM= 5.02 Transcript Type= NA
chr7	45000188	45076469	45000188	45076469	+	ENST00000544363.5@CCM2	ENST00000544363.5	protein_coding	45000188,45038253,45063918,45064463,45072726,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45072783,45073571,45074408,45076469	Gene ID= ENSG00000136280.15 TPM= 11.71 Transcript Type= protein_coding
chr7	45000249	45076414	45000249	45076414	+	ENST00000488727.5@CCM2	ENST00000488727.5	protein_coding	45000249,45038253,45063918,45064463,45068443,45069826,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45068579,45069961,45073571,45074408,45076414	Gene ID= ENSG00000136280.15 TPM= 7.72 Transcript Type= nonsense_mediated_decay
chr7	45097581	45100147	45097581	45100147	-	transcript1639.chr7.nnic@NA	transcript1639.chr7.nnic	NA	45097581	45100147	Gene ID= novel_gene_chr7_1640 TPM= 1.93 Transcript Type= NA
chr7	45100100	45111746	45100100	45111746	-	transcript1624.chr7.nnic@TBRG4	transcript1624.chr7.nnic	protein_coding	45111643,45108827,45105441,45104538,45104099,45103333,45102347,45101853,45101503,45101258,45100100	45111746,45109287,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 8.48 Transcript Type= NA
chr7	45100100	45112047	45100100	45112047	-	ENST00000395655.8@TBRG4	ENST00000395655.8	protein_coding	45111664,45108827,45105441,45103333,45102347,45101825,45101503,45101258,45100100	45112047,45109287,45105764,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 6.45 Transcript Type= protein_coding
chr7	45100100	45111714	45100100	45111714	-	ENST00000258770.7@TBRG4	ENST00000258770.7	protein_coding	45111643,45108827,45105441,45104538,45104099,45103333,45102347,45101825,45101503,45101258,45100100	45111714,45109287,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 156.16 Transcript Type= protein_coding
chr7	45100101	45111706	45100101	45111706	-	ENST00000494076.5@TBRG4	ENST00000494076.5	protein_coding	45111643,45108827,45105441,45104538,45104099,45103333,45102347,45101825,45101503,45101258,45100101	45111706,45109243,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 7.07 Transcript Type= protein_coding
chr7	45100100	45111718	45100100	45111718	-	ENST00000361278.7@TBRG4	ENST00000361278.7	protein_coding	45111643,45108827,45105441,45103333,45102347,45101825,45101503,45101258,45100100	45111718,45109287,45105764,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 23.82 Transcript Type= protein_coding
chr7	45157791	45184250	45157791	45184250	+	ENST00000242249.8@RAMP3	ENST00000242249.8	protein_coding	45157791,45177309,45183157	45157886,45177441,45184250	Gene ID= ENSG00000122679.8 TPM= 22.2 Transcript Type= protein_coding
chr7	45726333	45768988	45726333	45768988	-	transcript1649.chr7.nnic@SEPT7P2	transcript1649.chr7.nnic	transcribed_unprocessed_pseudogene	45768660,45759074,45758043,45756909,45751529,45748626,45747215,45744997,45736787,45728178,45726333	45768988,45759174,45758177,45756992,45751646,45748714,45747311,45745048,45736910,45728313,45726861	Gene ID= ENSG00000214765.8 TPM= 2.9 Transcript Type= NA
chr7	47275154	47582144	47275154	47582144	-	ENST00000311160.13@TNS3	ENST00000311160.13	protein_coding	47582051,47529036,47506907,47481103,47442003,47439487,47437263,47435282,47428312,47424101,47415094,47413937,47411727,47400785,47400393,47396800,47368365,47346187,47344924,47344755,47304832,47302950,47302186,47297082,47293733,47292828,47291955,47283697,47280286,47280164,47275154	47582144,47529147,47506944,47481141,47442055,47439658,47437313,47435404,47428376,47424184,47415206,47413997,47411802,47400914,47400458,47396904,47369621,47346356,47345038,47344838,47305003,47303584,47302272,47297213,47293828,47292905,47292032,47283865,47280354,47280190,47278220	Gene ID= ENSG00000136205.16 TPM= 8.37 Transcript Type= protein_coding
chr7	47275154	47328186	47275154	47328186	-	transcript1656.chr7.nnic@TNS3	transcript1656.chr7.nnic	protein_coding	47327981,47304832,47302950,47302186,47297082,47293733,47292828,47291955,47283697,47280286,47280164,47275154	47328186,47305003,47303584,47302272,47297213,47293828,47292905,47292032,47283865,47280354,47280190,47278220	Gene ID= ENSG00000136205.16 TPM= 16.09 Transcript Type= NA
chr7	47275154	47305131	47275154	47305131	-	transcript1660.chr7.nic@TNS3	transcript1660.chr7.nic	protein_coding	47304832,47302950,47302186,47297082,47293733,47292828,47291955,47283697,47280286,47280164,47275154	47305131,47303584,47302272,47297213,47293828,47292905,47292032,47283865,47280354,47280190,47278220	Gene ID= ENSG00000136205.16 TPM= 15.13 Transcript Type= NA
chr7	47955355	47960075	47955355	47960075	-	transcript1662.chr7.nnic@NA	transcript1662.chr7.nnic	NA	47955355	47960075	Gene ID= novel_gene_chr7_1663 TPM= 2.9 Transcript Type= NA
chr7	47963288	47979598	47963288	47979598	-	transcript1664.chr7.nic@HUS1	transcript1664.chr7.nic	protein_coding	47979468,47978689,47978417,47976730,47975613,47969219,47967806,47965300,47963288	47979598,47978816,47978593,47976837,47975687,47969318,47967925,47965438,47964632	Gene ID= ENSG00000136273.11 TPM= 10.62 Transcript Type= NA
chr7	48089265	48108419	48089265	48108419	+	ENST00000395560.7@UPP1	ENST00000395560.7	protein_coding	48089265,48090188,48094763,48106873,48107361,48108218	48089418,48090364,48094827,48107082,48107507,48108419	Gene ID= ENSG00000183696.13 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr7	50444129	50450390	50444129	50450390	-	ENST00000615084.4@FIGNL1	ENST00000615084.4	protein_coding	50450301,50448181,50444129	50450390,50448289,50447297	Gene ID= ENSG00000132436.11 TPM= 1.93 Transcript Type= protein_coding
chr7	50450445	50453320	50450445	50453320	+	transcript1681.chr7.nnic@NA	transcript1681.chr7.nnic	NA	50450445	50453320	Gene ID= novel_gene_chr7_1682 TPM= 3.86 Transcript Type= NA
chr7	50592580	50793486	50592580	50793486	-	transcript1686.chr7.nnic@GRB10	transcript1686.chr7.nnic	protein_coding	50793224,50755887,50732272,50727793,50727340,50726912,50726013,50705140,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793486,50756056,50732368,50727890,50727435,50727124,50726035,50705323,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 4.27 Transcript Type= NA
chr7	50592580	50793486	50592580	50793486	-	transcript1693.chr7.nnic@GRB10	transcript1693.chr7.nnic	protein_coding	50793224,50755887,50732272,50710875,50705140,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793486,50756056,50732368,50710990,50705323,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 4.27 Transcript Type= NA
chr7	50592580	50793486	50592580	50793486	-	transcript1694.chr7.nnic@GRB10	transcript1694.chr7.nnic	protein_coding	50793224,50755887,50710875,50705140,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793486,50756056,50710990,50705323,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 4.03 Transcript Type= NA
chr7	50592580	50793486	50592580	50793486	-	transcript1695.chr7.nnic@GRB10	transcript1695.chr7.nnic	protein_coding	50793224,50755887,50732272,50705140,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793486,50756056,50732368,50705323,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 4.27 Transcript Type= NA
chr7	50592580	50793486	50592580	50793486	-	transcript1700.chr7.nic@GRB10	transcript1700.chr7.nic	protein_coding	50793224,50755887,50705140,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793486,50756056,50705323,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 12.71 Transcript Type= NA
chr7	50592580	50793486	50592580	50793486	-	transcript1701.chr7.nic@GRB10	transcript1701.chr7.nic	protein_coding	50793224,50755887,50710875,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793486,50756056,50710990,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 6.27 Transcript Type= NA
chr7	50592580	50793486	50592580	50793486	-	transcript1702.chr7.nic@GRB10	transcript1702.chr7.nic	protein_coding	50793224,50755887,50732272,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793486,50756056,50732368,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 4.59 Transcript Type= NA
chr7	50592580	50793458	50592580	50793458	-	transcript1704.chr7.nnic@GRB10	transcript1704.chr7.nnic	protein_coding	50793224,50705140,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793458,50705323,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 5.47 Transcript Type= NA
chr7	50592580	50645713	50592580	50645713	-	transcript1716.chr7.nnic@GRB10	transcript1716.chr7.nnic	protein_coding	50645574,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50645713,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 16.89 Transcript Type= NA
chr7	50590063	50793462	50590063	50793462	-	ENST00000335866.7@GRB10	ENST00000335866.7	protein_coding	50793224,50755887,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590063	50793462,50756056,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 5.79 Transcript Type= protein_coding
chr7	50592610	50793436	50592610	50793436	-	ENST00000402497.5@GRB10	ENST00000402497.5	protein_coding	50793224,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592610	50793436,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 10.62 Transcript Type= protein_coding
chr7	50641685	50643949	50641685	50643949	+	transcript1723.chr7.nnic@NA	transcript1723.chr7.nnic	NA	50641685,50642881	50641995,50643949	Gene ID= novel_gene_chr7_1724 TPM= 16.41 Transcript Type= NA
chr7	51072716	51316763	51072716	51316763	-	ENST00000632460.1@COBL	ENST00000632460.1	protein_coding	51316593,51219741,51193379,51190850,51187914,51184102,51136158,51085166,51072716	51316763,51219944,51193589,51191078,51187958,51184199,51136331,51085304,51073385	Gene ID= ENSG00000106078.17 TPM= 24.72 Transcript Type= protein_coding
chr7	51070828	51316764	51070828	51316764	-	ENST00000441453.5@COBL	ENST00000441453.5	protein_coding	51316593,51219741,51193379,51190850,51184102,51136158,51085166,51070828	51316764,51219944,51193589,51191078,51184199,51136331,51085304,51073385	Gene ID= ENSG00000106078.17 TPM= 5.9 Transcript Type= protein_coding
chr7	51068610	51070510	51068610	51070510	-	transcript1764.chr7.nnic@NA	transcript1764.chr7.nnic	NA	51068610	51070510	Gene ID= novel_gene_chr7_1765 TPM= 1.93 Transcript Type= NA
chr7	54752251	54759246	54752251	54759246	-	ENST00000352861.8@SEC61G	ENST00000352861.8	protein_coding	54759158,54757495,54755779,54752251	54759246,54757594,54755881,54752420	Gene ID= ENSG00000132432.13 TPM= 43.44 Transcript Type= protein_coding
chr7	55018848	55021186	55018848	55021186	+	transcript1772.chr7.nnic@NA	transcript1772.chr7.nnic	NA	55018848	55021186	Gene ID= novel_gene_chr7_1773 TPM= 4.83 Transcript Type= NA
chr7	55208411	55211563	55208411	55211563	+	transcript1776.chr7.nnic@NA	transcript1776.chr7.nnic	NA	55208411	55211563	Gene ID= novel_gene_chr7_1777 TPM= 1.93 Transcript Type= NA
chr7	55365448	55433742	55365448	55433742	+	ENST00000254770.2@LANCL2	ENST00000254770.2	protein_coding	55365448,55391793,55398423,55399957,55401174,55411907,55425254,55428375,55431226	55366229,55391910,55398630,55400104,55401320,55412089,55425430,55428447,55433742	Gene ID= ENSG00000132434.9 TPM= 11.58 Transcript Type= protein_coding
chr7	55366340	55368017	55366340	55368017	+	transcript1782.chr7.nnic@NA	transcript1782.chr7.nnic	NA	55366340	55368017	Gene ID= novel_gene_chr7_1783 TPM= 1.93 Transcript Type= NA
chr7	55470611	55572525	55470611	55572525	-	transcript1788.chr7.nnic@VOPP1	transcript1788.chr7.nnic	protein_coding	55572271,55521072,55497613,55492282,55472873,55470611	55572525,55521130,55497690,55492418,55473045,55472640	Gene ID= ENSG00000154978.12 TPM= 4.83 Transcript Type= NA
chr7	55470613	55572525	55470613	55572525	-	ENST00000285279.9@VOPP1	ENST00000285279.9	protein_coding	55572271,55521072,55497613,55492282,55470613	55572525,55521130,55497690,55492418,55473045	Gene ID= ENSG00000154978.12 TPM= 52.13 Transcript Type= protein_coding
chr7	55951860	55955345	55951860	55955345	+	transcript1805.chr7.nnic@NIPSNAP2	transcript1805.chr7.nnic	protein_coding	55951860,55954909	55951930,55955345	Gene ID= ENSG00000146729.9 TPM= 1.93 Transcript Type= NA
chr7	55951819	55956501	55951819	55956501	+	ENST00000285298.8@MRPS17	ENST00000285298.8	protein_coding	55951819,55953179,55954909	55951930,55953318,55956501	Gene ID= ENSG00000239789.5 TPM= 42.47 Transcript Type= protein_coding
chr7	55964581	56000181	55964581	56000181	+	ENST00000322090.7@NIPSNAP2	ENST00000322090.7	protein_coding	55964581,55978126,55978350,55981473,55982210,55983728,55984847,55994894,55997366,55999008	55964701,55978265,55978395,55981567,55982280,55983868,55984878,55994988,55997449,56000181	Gene ID= ENSG00000146729.9 TPM= 525.51 Transcript Type= protein_coding
chr7	55964581	56000181	55964581	56000181	+	ENST00000446778.5@NIPSNAP2	ENST00000446778.5	protein_coding	55964581,55978126,55981473,55983728,55984847,55994894,55997366,55999008	55964701,55978265,55981567,55983868,55984878,55994988,55997449,56000181	Gene ID= ENSG00000146729.9 TPM= 4.56 Transcript Type= protein_coding
chr7	56051630	56063989	56051630	56063989	+	ENST00000275603.8@CCT6A	ENST00000275603.8	protein_coding	56051630,56052422,56054369,56055624,56056311,56057993,56058362,56058620,56059544,56060269,56060807,56061747,56062683,56063013	56051985,56052485,56054503,56055797,56056414,56058103,56058521,56058702,56059640,56060416,56060940,56061849,56062755,56063989	Gene ID= ENSG00000146731.10 TPM= 342.69 Transcript Type= protein_coding
chr7	56051685	56063989	56051685	56063989	+	ENST00000335503.3@CCT6A	ENST00000335503.3	protein_coding	56051685,56052422,56055624,56056311,56057993,56058362,56058620,56059544,56060269,56060807,56061747,56062683,56063013	56051985,56052485,56055797,56056414,56058103,56058521,56058702,56059640,56060416,56060940,56061849,56062755,56063989	Gene ID= ENSG00000146731.10 TPM= 4.83 Transcript Type= protein_coding
chr7	56052795	56054009	56052795	56054009	-	transcript1862.chr7.nnic@NA	transcript1862.chr7.nnic	NA	56052795	56054009	Gene ID= novel_gene_chr7_1863 TPM= 3.86 Transcript Type= NA
chr7	56064224	56080670	56064224	56080670	+	ENST00000434526.6@SUMF2	ENST00000434526.6	protein_coding	56064224,56068482,56072997,56074174,56074586,56076834,56078102,56078364,56079528	56064378,56068638,56073111,56074218,56074736,56076889,56078186,56078508,56080670	Gene ID= ENSG00000129103.17 TPM= 19.31 Transcript Type= protein_coding
chr7	56064308	56080669	56064308	56080669	+	ENST00000438133.5@SUMF2	ENST00000438133.5	protein_coding	56064308,56068482,56072997,56076834,56078102,56078364,56079528	56064378,56068638,56073111,56076889,56078186,56078508,56080669	Gene ID= ENSG00000129103.17 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr7	56064301	56080638	56064301	56080638	+	ENST00000423763.5@SUMF2	ENST00000423763.5	protein_coding	56064301,56068482,56072997,56074174,56076834,56078102,56078364,56079528	56064378,56068638,56073111,56074218,56076889,56078186,56078508,56080638	Gene ID= ENSG00000129103.17 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr7	56064277	56080665	56064277	56080665	+	ENST00000436782.5@SUMF2	ENST00000436782.5	protein_coding	56064277,56068482,56076834,56078102,56078364,56079528	56064378,56068638,56076889,56078186,56078508,56080665	Gene ID= ENSG00000129103.17 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr7	56079923	56092952	56079923	56092952	-	transcript1866.chr7.nnic@PHKG1	transcript1866.chr7.nnic	protein_coding	56092836,56088859,56087598,56086970,56083650,56083278,56082807,56082163,56081893,56081630,56079923	56092952,56088975,56087776,56087024,56083715,56083441,56082941,56082253,56082046,56081755,56081299	Gene ID= ENSG00000164776.9 TPM= 9.97 Transcript Type= NA
chr7	56080283	56092996	56080283	56092996	-	ENST00000537360.5@PHKG1	ENST00000537360.5	protein_coding	56092836,56088859,56087598,56086970,56083650,56083278,56082163,56081893,56081630,56080283	56092996,56088975,56087776,56087024,56083724,56083441,56082253,56082046,56081755,56081299	Gene ID= ENSG00000164776.9 TPM= 153.48 Transcript Type= protein_coding
chr7	56080283	56092996	56080283	56092996	-	ENST00000452681.6@PHKG1	ENST00000452681.6	protein_coding	56092836,56088859,56087598,56086970,56084149,56083650,56083278,56082163,56081893,56081630,56080283	56092996,56088975,56087776,56087024,56084244,56083715,56083441,56082253,56082046,56081755,56081299	Gene ID= ENSG00000164776.9 TPM= 1.93 Transcript Type= protein_coding
chr7	56080982	56092996	56080982	56092996	-	ENST00000297373.6@PHKG1	ENST00000297373.6	protein_coding	56092836,56088859,56087598,56086970,56083650,56083278,56082163,56081893,56081630,56080982	56092996,56088975,56087776,56087024,56083715,56083441,56082253,56082046,56081755,56081299	Gene ID= ENSG00000164776.9 TPM= 1.93 Transcript Type= protein_coding
chr7	56101569	56106576	56101569	56106576	-	ENST00000395422.3@CHCHD2	ENST00000395422.3	protein_coding	56106364,56104226,56102867,56101569	56106576,56104475,56103011,56101861	Gene ID= ENSG00000106153.12 TPM= 493.27 Transcript Type= protein_coding
chr7	57404198	57416207	57404198	57416207	+	transcript1909.chr7.nnic@AC237221.1	transcript1909.chr7.nnic	lincRNA	57404198,57407074,57407483,57408276,57410934	57404369,57407170,57407550,57408401,57416207	Gene ID= ENSG00000260653.5 TPM= 8.69 Transcript Type= NA
chr7	57414861	57418220	57414861	57418220	+	transcript1913.chr7.nnic@NA	transcript1913.chr7.nnic	NA	57414861	57418220	Gene ID= novel_gene_chr7_1914 TPM= 3.86 Transcript Type= NA
chr7	64492223	64495397	64492223	64495397	-	transcript1918.chr7.nnic@NA	transcript1918.chr7.nnic	NA	64492223	64495397	Gene ID= novel_gene_chr7_1919 TPM= 2.9 Transcript Type= NA
chr7	64519879	64563098	64519879	64563098	-	transcript1920.chr7.nnic@ZNF680	transcript1920.chr7.nnic	protein_coding	64562925,64544306,64543707,64535819,64519879	64563098,64544432,64543802,64535936,64522500	Gene ID= ENSG00000173041.11 TPM= 2.25 Transcript Type= NA
chr7	64524578	64563098	64524578	64563098	-	transcript1922.chr7.nnic@ZNF680	transcript1922.chr7.nnic	protein_coding	64562925,64544306,64543707,64535819,64524578	64563098,64544432,64543802,64535936,64526517	Gene ID= ENSG00000173041.11 TPM= 1.93 Transcript Type= NA
chr7	64519884	64563106	64519884	64563106	-	ENST00000309683.10@ZNF680	ENST00000309683.10	protein_coding	64562925,64544306,64543707,64519884	64563106,64544432,64543802,64522500	Gene ID= ENSG00000173041.11 TPM= 9.97 Transcript Type= protein_coding
chr7	64519878	64563071	64519878	64563071	-	transcript1926.chr7.nnic@ZNF680	transcript1926.chr7.nnic	protein_coding	64562925,64519878	64563071,64522500	Gene ID= ENSG00000173041.11 TPM= 2.25 Transcript Type= NA
chr7	64888527	64890100	64888527	64890100	-	ENST00000340779.3@AC073349.1	ENST00000340779.3	antisense_RNA	64889452,64889066,64888527	64890100,64889187,64888817	Gene ID= ENSG00000189316.3 TPM= 1.93 Transcript Type= antisense_RNA
chr7	64976761	65006729	64976761	65006729	-	transcript1946.chr7.nic@ZNF117	transcript1946.chr7.nic	protein_coding	65006541,64981984,64981387,64976761	65006729,64982116,64981482,64979536	Gene ID= ENSG00000152926.14 TPM= 1.93 Transcript Type= NA
chr7	65038360	65074713	65038360	65074713	+	ENST00000426828.5@CCT6P3	ENST00000426828.5	transcribed_unprocessed_pseudogene	65038360,65064999,65066253,65066945,65068456,65068709,65069661,65070346,65070909,65073441,65073778	65038565,65065133,65066426,65067050,65068610,65068790,65069757,65070484,65071042,65073514,65074713	Gene ID= ENSG00000234585.6 TPM= 9.65 Transcript Type= processed_transcript
chr7	65373799	65401125	65373799	65401125	+	ENST00000328747.11@ZNF92	ENST00000328747.11	protein_coding	65373799,65387902,65388806,65398341	65374000,65388028,65388901,65401125	Gene ID= ENSG00000146757.13 TPM= 4.83 Transcript Type= protein_coding
chr7	65751074	65764222	65751074	65764222	+	transcript1951.chr7.nnic@CCT6P1	transcript1951.chr7.nnic	transcribed_unprocessed_pseudogene	65751074,65752164,65754527,65755780,65756469,65757983,65758236,65759175,65759860,65760424,65762947,65763281	65751278,65752310,65754661,65755952,65756574,65758137,65758317,65759271,65759998,65760556,65763020,65764222	Gene ID= ENSG00000228409.6 TPM= 2.9 Transcript Type= NA
chr7	65873254	65954813	65873254	65954813	+	transcript1956.chr7.nnic@VKORC1L1	transcript1956.chr7.nnic	protein_coding	65873254,65940030,65948671,65954074	65873565,65940167,65948780,65954813	Gene ID= ENSG00000196715.5 TPM= 1.93 Transcript Type= NA
chr7	65873267	65959563	65873267	65959563	+	ENST00000360768.3@VKORC1L1	ENST00000360768.3	protein_coding	65873267,65948671,65954074	65873565,65948780,65959563	Gene ID= ENSG00000196715.5 TPM= 7.72 Transcript Type= protein_coding
chr7	65960684	65982314	65960684	65982314	-	ENST00000304895.8@GUSB	ENST00000304895.8	protein_coding	65981974,65980224,65979727,65979399,65976015,65974919,65974526,65974295,65970282,65967731,65964323,65960684	65982314,65980409,65979911,65979541,65976202,65975071,65974704,65974441,65970366,65967907,65964458,65961063	Gene ID= ENSG00000169919.16 TPM= 9.17 Transcript Type= protein_coding
chr7	65960684	65982235	65960684	65982235	-	transcript1978.chr7.nic@GUSB	transcript1978.chr7.nic	protein_coding	65981974,65980224,65979727,65979399,65976015,65974526,65974295,65970282,65967731,65964323,65960684	65982235,65980409,65979911,65979541,65976202,65974704,65974441,65970366,65967907,65964458,65961063	Gene ID= ENSG00000169919.16 TPM= 8.21 Transcript Type= NA
chr7	65960698	65982215	65960698	65982215	-	ENST00000430730.5@GUSB	ENST00000430730.5	protein_coding	65981974,65980224,65976015,65974919,65974526,65974295,65970282,65967731,65964323,65960698	65982215,65980409,65976202,65975071,65974704,65974441,65970366,65967907,65964458,65961063	Gene ID= ENSG00000169919.16 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr7	66075874	66092931	66075874	66092931	+	ENST00000395332.7@ASL	ENST00000395332.7	protein_coding	66075874,66081803,66082368,66082880,66083077,66086585,66086744,66087334,66087729,66088807,66089091,66089276,66089612,66092006,66092557,66092768	66076093,66081997,66082451,66082936,66083174,66086662,66086821,66087386,66087791,66088921,66089175,66089335,66089695,66092086,66092663,66092931	Gene ID= ENSG00000126522.16 TPM= 3.86 Transcript Type= protein_coding
chr7	66114847	66154568	66114847	66154568	+	transcript1999.chr7.nnic@CRCP	transcript1999.chr7.nnic	protein_coding	66114847,66127704,66130744,66134280,66145443,66152208,66154307	66114970,66127740,66130842,66134374,66145500,66153915,66154568	Gene ID= ENSG00000241258.6 TPM= 4.83 Transcript Type= NA
chr7	66114605	66154561	66114605	66154561	+	ENST00000395326.7@CRCP	ENST00000395326.7	protein_coding	66114605,66127704,66130744,66134280,66145443,66152208	66114970,66127740,66130842,66134374,66145500,66154561	Gene ID= ENSG00000241258.6 TPM= 7.72 Transcript Type= protein_coding
chr7	66205199	66360443	66205199	66360443	+	ENST00000304842.5@TPST1	ENST00000304842.5	protein_coding	66205199,66240325,66286511,66352505,66356825,66359895	66205522,66241270,66286709,66352555,66356871,66360443	Gene ID= ENSG00000169902.13 TPM= 3.86 Transcript Type= protein_coding
chr7	66493706	66495474	66493706	66495474	+	ENST00000445681.1@GS1-124K5.4	ENST00000445681.1	lincRNA	66493706,66495255	66494025,66495474	Gene ID= ENSG00000237310.1 TPM= 1.93 Transcript Type= lincRNA
chr7	66553310	66592386	66553310	66592386	-	transcript2017.chr7.nnic@AC006001.3	transcript2017.chr7.nnic	transcribed_unprocessed_pseudogene	66592257,66573385,66560579,66553310	66592386,66573550,66560675,66554837	Gene ID= ENSG00000229180.6 TPM= 3.41 Transcript Type= NA
chr7	66553574	66592385	66553574	66592385	-	transcript2019.chr7.nnic@AC006001.3	transcript2019.chr7.nnic	transcribed_unprocessed_pseudogene	66592257,66576755,66573385,66553574	66592385,66576932,66573550,66554837	Gene ID= ENSG00000229180.6 TPM= 3.09 Transcript Type= NA
chr7	66553310	66592386	66553310	66592386	-	transcript2022.chr7.nic@AC006001.3	transcript2022.chr7.nic	transcribed_unprocessed_pseudogene	66592257,66573385,66553310	66592386,66573550,66554837	Gene ID= ENSG00000229180.6 TPM= 3.09 Transcript Type= NA
chr7	66740733	66811464	66740733	66811464	+	ENST00000284957.9@RABGEF1	ENST00000284957.9	protein_coding	66740733,66771883,66775227,66783675,66795511,66797374,66799323,66805140,66808886	66740792,66772078,66775393,66783841,66795592,66797506,66799414,66805396,66811464	Gene ID= ENSG00000154710.16 TPM= 7.72 Transcript Type= protein_coding
chr7	66921225	66958551	66921225	66958551	+	ENST00000341567.8@TMEM248	ENST00000341567.8	protein_coding	66921225,66941848,66944976,66948544,66950952,66953226,66955502	66921461,66942024,66945261,66948694,66951135,66953369,66958551	Gene ID= ENSG00000106609.16 TPM= 54.06 Transcript Type= protein_coding
chr7	66987677	66995601	66987677	66995601	-	ENST00000246868.6@SBDS	ENST00000246868.6	protein_coding	66995290,66994212,66993217,66991137,66987677	66995601,66994341,66993417,66991301,66988499	Gene ID= ENSG00000126524.9 TPM= 845.13 Transcript Type= protein_coding
chr7	66987744	66995576	66987744	66995576	-	ENST00000414306.5@SBDS	ENST00000414306.5	protein_coding	66995290,66994220,66993217,66991137,66987744	66995576,66994341,66993417,66991301,66988499	Gene ID= ENSG00000126524.9 TPM= 18.34 Transcript Type= nonsense_mediated_decay
chr7	66996815	67239514	66996815	67239514	+	ENST00000359626.9@TYW1	ENST00000359626.9	protein_coding	66996815,66998065,66998817,67009583,67014367,67017853,67024900,67049949,67055835,67067285,67083430,67098541,67117483,67183126,67195170,67238308	66996982,66998195,66998954,67009684,67014561,67018143,67025022,67050066,67055887,67067403,67083539,67098718,67117618,67183236,67195337,67239514	Gene ID= ENSG00000198874.12 TPM= 16.41 Transcript Type= protein_coding
chr7	67192818	67302900	67192818	67302900	-	transcript2074.chr7.nnic@PMS2P4	transcript2074.chr7.nnic	transcribed_unprocessed_pseudogene	67302376,67299285,67297217,67295618,67292463,67192818	67302900,67299424,67297303,67295801,67292549,67193159	Gene ID= ENSG00000067601.7 TPM= 1.93 Transcript Type= NA
chr7	67302621	67321526	67302621	67321526	+	ENST00000416602.6@STAG3L4	ENST00000416602.6	transcribed_unprocessed_pseudogene	67302621,67305987,67308935,67309564,67320103	67302885,67306083,67309139,67309715,67321526	Gene ID= ENSG00000106610.14 TPM= 8.69 Transcript Type= processed_transcript
chr7	67302624	67310284	67302624	67310284	+	transcript2080.chr7.nic@STAG3L4	transcript2080.chr7.nic	transcribed_unprocessed_pseudogene	67302624,67305987,67308935,67309564	67302885,67306083,67309139,67310284	Gene ID= ENSG00000106610.14 TPM= 1.93 Transcript Type= NA
chr7	67302655	67320401	67302655	67320401	+	transcript2083.chr7.nnic@STAG3L4	transcript2083.chr7.nnic	transcribed_unprocessed_pseudogene	67302655,67308935,67309564,67320103	67302885,67309139,67309715,67320401	Gene ID= ENSG00000106610.14 TPM= 4.83 Transcript Type= NA
chr7	67304154	67304347	67304154	67304347	+	transcript2087.chr7.nnic@NA	transcript2087.chr7.nnic	NA	67304154	67304347	Gene ID= novel_gene_chr7_2088 TPM= 1.93 Transcript Type= NA
chr7	67335871	67340012	67335871	67340012	+	transcript2102.chr7.nic@LINC01372	transcript2102.chr7.nic	lincRNA	67335871,67339450	67336112,67340012	Gene ID= ENSG00000235475.1 TPM= 11.58 Transcript Type= NA
chr7	67335976	67340024	67335976	67340024	+	ENST00000430244.1@LINC01372	ENST00000430244.1	lincRNA	67335976,67339450,67339797	67336112,67339573,67340024	Gene ID= ENSG00000235475.1 TPM= 23.17 Transcript Type= lincRNA
chr7	67342559	67345273	67342559	67345273	+	transcript2105.chr7.nnic@NA	transcript2105.chr7.nnic	NA	67342559	67345273	Gene ID= novel_gene_chr7_2106 TPM= 5.79 Transcript Type= NA
chr7	70694050	70695826	70694050	70695826	+	transcript2112.chr7.nnic@NA	transcript2112.chr7.nnic	NA	70694050	70695826	Gene ID= novel_gene_chr7_2113 TPM= 3.86 Transcript Type= NA
chr7	70790651	70792868	70790651	70792868	+	transcript2110.chr7.nnic@NA	transcript2110.chr7.nnic	NA	70790651	70792868	Gene ID= novel_gene_chr7_2111 TPM= 11.58 Transcript Type= NA
chr7	72574515	72828198	72574515	72828198	-	ENST00000620995.4@TYW1B	ENST00000620995.4	protein_coding	72828072,72826855,72815380,72810471,72807066,72802400,72777416,72744484,72728822,72713621,72694687,72628887,72616672,72574515	72828198,72826985,72815481,72810665,72807356,72802522,72777533,72744601,72728931,72713798,72694822,72628997,72616839,72575719	Gene ID= ENSG00000277149.4 TPM= 1.93 Transcript Type= protein_coding
chr7	72829426	72837371	72829426	72837371	+	transcript2119.chr7.nnic@SBDSP1	transcript2119.chr7.nnic	transcribed_unprocessed_pseudogene	72829426,72829683,72830692,72831602,72833764,72836577	72829471,72829783,72830813,72831798,72833928,72837371	Gene ID= ENSG00000225648.5 TPM= 1.93 Transcript Type= NA
chr7	72829399	72837379	72829399	72837379	+	transcript2126.chr7.nic@SBDSP1	transcript2126.chr7.nic	transcribed_unprocessed_pseudogene	72829399,72830692,72831602,72836577	72829783,72830813,72831798,72837379	Gene ID= ENSG00000225648.5 TPM= 1.93 Transcript Type= NA
chr7	72829426	72837371	72829426	72837371	+	transcript2129.chr7.nic@SBDSP1	transcript2129.chr7.nic	transcribed_unprocessed_pseudogene	72829426,72831602,72833764,72836577	72829783,72831798,72833928,72837371	Gene ID= ENSG00000225648.5 TPM= 13.51 Transcript Type= NA
chr7	72994920	73005938	72994920	73005938	-	transcript2138.chr7.nnic@STAG3L3	transcript2138.chr7.nnic	transcribed_unprocessed_pseudogene	73005693,73003645,73003021,73000358,72999761,72999471,72999055,72998676,72994920	73005938,73003730,73003137,73000481,72999859,72999550,72999162,72998790,72995297	Gene ID= ENSG00000174353.17 TPM= 1.93 Transcript Type= NA
chr7	72994434	73005938	72994434	73005938	-	transcript2144.chr7.nnic@STAG3L3	transcript2144.chr7.nnic	transcribed_unprocessed_pseudogene	73005693,73003645,73003021,73000358,72999761,72999471,72998676,72994434	73005938,73003730,73003137,73000481,72999859,72999550,72998790,72995297	Gene ID= ENSG00000174353.17 TPM= 1.93 Transcript Type= NA
chr7	72994434	73005938	72994434	73005938	-	transcript2151.chr7.nnic@STAG3L3	transcript2151.chr7.nnic	transcribed_unprocessed_pseudogene	73005693,73003645,73003021,72999761,72999471,72998676,72994434	73005938,73003730,73003137,72999859,72999550,72998790,72995297	Gene ID= ENSG00000174353.17 TPM= 2.9 Transcript Type= NA
chr7	72998484	73005915	72998484	73005915	-	ENST00000448173.5@STAG3L3	ENST00000448173.5	transcribed_unprocessed_pseudogene	73005693,73003645,73003021,73000358,72999761,72998484	73005915,73003730,73003137,73000481,72999859,72999550	Gene ID= ENSG00000174353.17 TPM= 5.79 Transcript Type= processed_transcript
chr7	73154925	73207288	73154925	73207288	+	transcript2166.chr7.nic@GTF2IP4	transcript2166.chr7.nic	transcribed_processed_pseudogene	73154925,73175415,73176857,73179087,73180539,73182077,73183115,73184661,73190066,73191371,73192497,73192951,73194626,73195636,73195879,73197964,73198693,73199696,73200449,73202112,73203423,73204563,73205383	73155343,73175525,73176922,73179270,73180597,73182148,73183298,73184719,73190137,73191554,73192555,73193025,73194727,73195701,73196062,73198019,73198773,73199779,73200632,73202140,73203464,73204604,73207288	Gene ID= ENSG00000233369.7 TPM= 9.17 Transcript Type= NA
chr7	73154938	73207283	73154938	73207283	+	ENST00000544802.5@GTF2IP4	ENST00000544802.5	transcribed_processed_pseudogene	73154938,73175415,73176857,73179087,73180539,73182077,73183115,73184661,73190066,73191371,73192497,73192951,73194626,73195636,73195879,73197964,73198693,73199696,73200449,73202112,73203423,73204563,73205383,73206152	73155343,73175525,73176922,73179270,73180597,73182148,73183298,73184719,73190137,73191554,73192555,73193025,73194727,73195701,73196062,73198019,73198773,73199779,73200632,73202140,73203464,73204604,73205458,73207283	Gene ID= ENSG00000233369.7 TPM= 40.06 Transcript Type= processed_transcript
chr7	73303230	73308867	73303230	73308867	-	transcript2170.chr7.nnic@NSUN5	transcript2170.chr7.nnic	protein_coding	73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303987,73303826,73303600,73303230	73308867,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303914,73303740,73303529	Gene ID= ENSG00000130305.16 TPM= 3.38 Transcript Type= NA
chr7	73303230	73308867	73303230	73308867	-	ENST00000438747.6@NSUN5	ENST00000438747.6	protein_coding	73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303826,73303600,73303230	73308867,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303740,73303529	Gene ID= ENSG00000130305.16 TPM= 79.96 Transcript Type= protein_coding
chr7	73303230	73308806	73303230	73308806	-	ENST00000252594.10@NSUN5	ENST00000252594.10	protein_coding	73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303826,73303230	73308806,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303740	Gene ID= ENSG00000130305.16 TPM= 3.7 Transcript Type= protein_coding
chr7	73303235	73308816	73303235	73308816	-	ENST00000310326.8@NSUN5	ENST00000310326.8	protein_coding	73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303826,73303600,73303235	73308816,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303740,73303524	Gene ID= ENSG00000130305.16 TPM= 1.77 Transcript Type= protein_coding
chr7	73433783	73436120	73433783	73436120	+	ENST00000344575.4@FZD9	ENST00000344575.4	protein_coding	73433783	73436120	Gene ID= ENSG00000188763.4 TPM= 124.53 Transcript Type= protein_coding
chr7	73477047	73522306	73477047	73522306	-	transcript2185.chr7.nic@BAZ1B	transcript2185.chr7.nic	protein_coding	73521827,73510736,73508327,73498497,73492800,73489194,73477047	73522306,73510852,73508471,73498698,73492921,73489391,73478569	Gene ID= ENSG00000009954.10 TPM= 38.61 Transcript Type= NA
chr7	73440414	73441938	73440414	73441938	-	transcript2187.chr7.nnic@NA	transcript2187.chr7.nnic	NA	73440414	73441938	Gene ID= novel_gene_chr7_2188 TPM= 6.76 Transcript Type= NA
chr7	73536356	73558002	73536356	73558002	-	ENST00000223368.6@BCL7B	ENST00000223368.6	protein_coding	73557487,73552167,73543548,73539882,73537934,73536356	73558002,73552242,73543644,73540052,73538013,73537390	Gene ID= ENSG00000106635.7 TPM= 197.41 Transcript Type= protein_coding
chr7	73536371	73557671	73536371	73557671	-	ENST00000411832.5@BCL7B	ENST00000411832.5	protein_coding	73557487,73552167,73543548,73537934,73536371	73557671,73552242,73543644,73538013,73537390	Gene ID= ENSG00000106635.7 TPM= 3.86 Transcript Type= protein_coding
chr7	73536388	73557251	73536388	73557251	-	ENST00000482231.5@BCL7B	ENST00000482231.5	protein_coding	73557041,73552167,73543548,73539882,73537934,73536388	73557251,73552242,73543644,73540052,73538013,73537390	Gene ID= ENSG00000106635.7 TPM= 5.79 Transcript Type= processed_transcript
chr7	73568932	73578791	73568932	73578791	-	ENST00000305632.9@TBL2	ENST00000305632.9	protein_coding	73578420,73574383,73573938,73573320,73572844,73571189,73568932	73578791,73574513,73574122,73573471,73572970,73571341,73570972	Gene ID= ENSG00000106638.15 TPM= 25.1 Transcript Type= protein_coding
chr7	73569660	73578635	73569660	73578635	-	transcript2208.chr7.nic@TBL2	transcript2208.chr7.nic	protein_coding	73578420,73574383,73573938,73573320,73572844,73571189,73569660	73578635,73574513,73574122,73573471,73572970,73572035,73570972	Gene ID= ENSG00000106638.15 TPM= 1.93 Transcript Type= NA
chr7	73569660	73578590	73569660	73578590	-	ENST00000450285.5@TBL2	ENST00000450285.5	protein_coding	73578420,73574383,73573961,73573320,73572844,73571189,73569660	73578590,73574513,73574122,73573471,73572970,73571341,73570972	Gene ID= ENSG00000106638.15 TPM= 22.2 Transcript Type= nonsense_mediated_decay
chr7	73593194	73624540	73593194	73624540	-	ENST00000313375.7@MLXIPL	ENST00000313375.7	protein_coding	73624200,73616071,73607590,73607331,73606974,73605910,73605688,73599526,73597182,73596865,73596639,73596364,73596153,73595842,73595637,73594274,73593194	73624540,73616177,73607672,73607420,73607018,73606111,73605768,73599695,73597713,73596932,73596789,73596479,73596272,73595969,73595760,73594403,73593983	Gene ID= ENSG00000009950.15 TPM= 27.03 Transcript Type= protein_coding
chr7	73593194	73596575	73593194	73596575	-	transcript2211.chr7.nic@MLXIPL	transcript2211.chr7.nic	protein_coding	73596153,73595842,73595637,73594274,73593194	73596575,73595969,73595760,73594403,73593983	Gene ID= ENSG00000009950.15 TPM= 26.06 Transcript Type= NA
chr7	73612950	73624522	73612950	73624522	-	transcript2215.chr7.nnic@MLXIPL	transcript2215.chr7.nnic	protein_coding	73624200,73615895,73612950	73624522,73616177,73614865	Gene ID= ENSG00000009950.15 TPM= 1.93 Transcript Type= NA
chr7	73602223	73604243	73602223	73604243	-	transcript2220.chr7.nnic@NA	transcript2220.chr7.nnic	NA	73602223	73604243	Gene ID= novel_gene_chr7_2221 TPM= 6.76 Transcript Type= NA
chr7	73667825	73672110	73667825	73672110	+	ENST00000324941.4@VPS37D	ENST00000324941.4	protein_coding	73667825,73669419,73670020,73671014	73668096,73669590,73670102,73672110	Gene ID= ENSG00000176428.5 TPM= 1.93 Transcript Type= protein_coding
chr7	73680969	73683453	73680969	73683453	-	ENST00000395176.2@DNAJC30	ENST00000395176.2	protein_coding	73680969	73683453	Gene ID= ENSG00000176410.7 TPM= 2.9 Transcript Type= protein_coding
chr7	73683568	73698212	73683568	73698212	+	ENST00000265758.6@BUD23	ENST00000265758.6	protein_coding	73683568,73683767,73686636,73686818,73686999,73690916,73692596,73693329,73693624,73693992,73697605,73697832	73683673,73683804,73686731,73686900,73687095,73691012,73692646,73693414,73693669,73694050,73697694,73698212	Gene ID= ENSG00000071462.11 TPM= 114.39 Transcript Type= protein_coding
chr7	73683568	73698212	73683568	73698212	+	transcript2228.chr7.nic@BUD23	transcript2228.chr7.nic	protein_coding	73683568,73683767,73686636,73686818,73686999,73690916,73692596,73693329,73693624,73693992,73697605,73697832	73683673,73683901,73686731,73686900,73687095,73691012,73692646,73693414,73693669,73694050,73697694,73698212	Gene ID= ENSG00000071462.11 TPM= 11.1 Transcript Type= NA
chr7	73683626	73698104	73683626	73698104	+	ENST00000430270.5@BUD23	ENST00000430270.5	protein_coding	73683626,73683767,73686636,73686818,73686999,73690916,73692596,73693329,73693624,73693992,73697605,73697832	73683673,73684000,73686731,73686900,73687095,73691012,73692646,73693414,73693669,73694050,73697694,73698104	Gene ID= ENSG00000071462.11 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr7	73699206	73719654	73699206	73719654	-	transcript2242.chr7.nic@STX1A	transcript2242.chr7.nic	protein_coding	73719602,73709045,73708589,73705150,73704350,73704148,73703755,73702845,73700730,73699206	73719654,73709122,73708688,73705224,73704423,73704256,73703828,73702982,73700931,73700484	Gene ID= ENSG00000106089.11 TPM= 1.93 Transcript Type= NA
chr7	73736094	73738867	73736094	73738867	-	ENST00000222800.7@ABHD11	ENST00000222800.7	protein_coding	73738646,73738328,73737562,73737221,73736929,73736094	73738867,73738463,73737735,73737391,73737110,73736691	Gene ID= ENSG00000106077.18 TPM= 8.69 Transcript Type= protein_coding
chr7	73736093	73738854	73736093	73738854	-	transcript2253.chr7.nic@ABHD11	transcript2253.chr7.nic	protein_coding	73738646,73738328,73736093	73738854,73738463,73737735	Gene ID= ENSG00000106077.18 TPM= 1.93 Transcript Type= NA
chr7	74027789	74069907	74027789	74069907	+	ENST00000252034.11@ELN	ENST00000252034.11	protein_coding	74027789,74035364,74036555,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74057640,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74065944,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74057696,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74065997,74066776,74069907	Gene ID= ENSG00000049540.16 TPM= 8.45 Transcript Type= protein_coding
chr7	74028142	74069899	74028142	74069899	+	transcript2262.chr7.nic@ELN	transcript2262.chr7.nic	protein_coding	74028142,74035364,74036555,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069899	Gene ID= ENSG00000049540.16 TPM= 2.65 Transcript Type= NA
chr7	74045651	74069677	74045651	74069677	+	transcript2271.chr7.nic@ELN	transcript2271.chr7.nic	protein_coding	74045651,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74057640,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74057696,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069677	Gene ID= ENSG00000049540.16 TPM= 2.9 Transcript Type= NA
chr7	74028170	74069907	74028170	74069907	+	ENST00000357036.9@ELN	ENST00000357036.9	protein_coding	74028170,74035364,74036555,74037707,74041216,74042614,74042984,74043103,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74057640,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74057696,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069907	Gene ID= ENSG00000049540.16 TPM= 5.55 Transcript Type= protein_coding
chr7	74028173	74069904	74028173	74069904	+	ENST00000429192.5@ELN	ENST00000429192.5	protein_coding	74028173,74035364,74036555,74037707,74041216,74042614,74042984,74043103,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069904	Gene ID= ENSG00000049540.16 TPM= 3.62 Transcript Type= protein_coding
chr7	74028175	74069678	74028175	74069678	+	ENST00000380576.9@ELN	ENST00000380576.9	protein_coding	74028175,74035364,74036555,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74065944,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74065997,74066776,74069678	Gene ID= ENSG00000049540.16 TPM= 1.93 Transcript Type= protein_coding
chr7	74028171	74031853	74028171	74031853	+	transcript2277.chr7.nnic@NA	transcript2277.chr7.nnic	NA	74028171	74031853	Gene ID= novel_gene_chr7_2278 TPM= 1.93 Transcript Type= NA
chr7	74174356	74197096	74174356	74197096	+	ENST00000353999.6@EIF4H	ENST00000353999.6	protein_coding	74174356,74187611,74189673,74189822,74194741,74195169	74174442,74187798,74189737,74189918,74194878,74197096	Gene ID= ENSG00000106682.14 TPM= 655.13 Transcript Type= protein_coding
chr7	74174245	74197101	74174245	74197101	+	ENST00000265753.12@EIF4H	ENST00000265753.12	protein_coding	74174245,74187611,74189673,74189822,74190247,74194741,74195169	74174442,74187798,74189737,74189918,74190306,74194878,74197101	Gene ID= ENSG00000106682.14 TPM= 54.7 Transcript Type= protein_coding
chr7	74231537	74254444	74231537	74254444	-	ENST00000055077.7@RFC2	ENST00000055077.7	protein_coding	74254271,74252429,74249739,74249012,74246662,74243146,74239938,74238923,74237362,74235532,74231537	74254444,74252498,74249780,74249118,74246763,74243246,74240095,74238988,74237442,74235645,74232216	Gene ID= ENSG00000049541.10 TPM= 22.2 Transcript Type= protein_coding
chr7	74289475	74405930	74289475	74405930	+	ENST00000361545.9@CLIP2	ENST00000361545.9	protein_coding	74289475,74317480,74338448,74353880,74356410,74357280,74360175,74364255,74375887,74380806,74386521,74389103,74397074,74400370,74401505,74403837	74289734,74317667,74339004,74354004,74356623,74357477,74360278,74364315,74376822,74380863,74386604,74389259,74397233,74400555,74401567,74405930	Gene ID= ENSG00000106665.15 TPM= 3.86 Transcript Type= protein_coding
chr7	74454322	74602604	74454322	74602604	+	transcript2318.chr7.nnic@GTF2IRD1	transcript2318.chr7.nnic	protein_coding	74454322,74508075,74512830,74515441,74518139,74519409,74521208,74524071,74529734,74535113,74536167,74538136,74538680,74539879,74544755,74545744,74547103,74555174,74555393,74557639,74558861,74559627,74589851,74590825,74595014,74601044,74602365	74454512,74508203,74512971,74515596,74518322,74519719,74521297,74524154,74529917,74535138,74536275,74538173,74538760,74539968,74544802,74545809,74547286,74555223,74555494,74557722,74559044,74559655,74589928,74591017,74595051,74601180,74602604	Gene ID= ENSG00000006704.10 TPM= 42.79 Transcript Type= NA
chr7	74454322	74602604	74454322	74602604	+	transcript2319.chr7.nnic@GTF2IRD1	transcript2319.chr7.nnic	protein_coding	74454322,74508075,74512830,74515441,74518139,74519409,74521208,74524071,74529734,74535113,74536167,74538136,74538680,74539879,74544755,74545744,74547103,74555174,74555438,74557639,74558861,74559627,74589851,74590825,74595014,74601044,74602365	74454512,74508203,74512971,74515596,74518322,74519719,74521297,74524154,74529917,74535138,74536275,74538173,74538760,74539968,74544802,74545809,74547286,74555223,74555494,74557722,74559044,74559655,74589928,74591017,74595051,74601180,74602604	Gene ID= ENSG00000006704.10 TPM= 92.67 Transcript Type= NA
chr7	74453906	74602591	74453906	74602591	+	transcript2323.chr7.nic@GTF2IRD1	transcript2323.chr7.nic	protein_coding	74453906,74508075,74512830,74515441,74518139,74519409,74521208,74524071,74529734,74535113,74536167,74538136,74538680,74539879,74544755,74545744,74547103,74555174,74555438,74557639,74558861,74559627,74589851,74590825,74595014,74601044	74454176,74508203,74512971,74515596,74518322,74519719,74521297,74524154,74529917,74535138,74536275,74538173,74538760,74539968,74544802,74545809,74547286,74555223,74555494,74557722,74559044,74559655,74589928,74591017,74595051,74602591	Gene ID= ENSG00000006704.10 TPM= 13.68 Transcript Type= NA
chr7	74454109	74602601	74454109	74602601	+	ENST00000424337.6@GTF2IRD1	ENST00000424337.6	protein_coding	74454109,74508075,74512830,74515441,74518139,74519409,74521208,74524071,74529734,74535113,74536167,74538136,74538680,74539879,74544755,74545744,74547103,74555174,74555438,74557639,74558861,74559627,74589851,74590825,74595014,74601044,74602365	74454176,74508203,74512971,74515596,74518322,74519719,74521297,74524154,74529917,74535138,74536275,74538173,74538760,74539968,74544802,74545809,74547286,74555223,74555494,74557722,74559044,74559655,74589928,74591017,74595051,74601180,74602601	Gene ID= ENSG00000006704.10 TPM= 38.13 Transcript Type= protein_coding
chr7	74606500	74607300	74606500	74607300	+	transcript2339.chr7.nnic@NA	transcript2339.chr7.nnic	NA	74606500	74607300	Gene ID= novel_gene_chr7_2340 TPM= 1.93 Transcript Type= NA
chr7	74657680	74691113	74657680	74691113	+	transcript2360.chr7.nic@GTF2I	transcript2360.chr7.nic	protein_coding	74657680,74689124,74690973	74658068,74689227,74691113	Gene ID= ENSG00000263001.5 TPM= 3.21 Transcript Type= NA
chr7	74657758	74760692	74657758	74760692	+	ENST00000620879.4@GTF2I	ENST00000620879.4	protein_coding	74657758,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759548	74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760692	Gene ID= ENSG00000263001.5 TPM= 19.14 Transcript Type= protein_coding
chr7	74657758	74760692	74657758	74760692	+	ENST00000621734.4@GTF2I	ENST00000621734.4	protein_coding	74657758,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74714857,74716894,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759548	74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74714916,74716950,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760692	Gene ID= ENSG00000263001.5 TPM= 7.56 Transcript Type= protein_coding
chr7	74796144	74851551	74796144	74851551	-	ENST00000451013.6@GTF2IRD2	ENST00000451013.6	protein_coding	74851367,74836280,74832805,74824933,74822624,74822427,74819969,74819554,74812739,74810896,74809108,74806934,74804777,74803298,74801985,74796144	74851551,74836383,74832943,74825052,74822807,74822455,74820023,74819597,74812816,74810952,74809173,74807011,74804860,74803481,74802013,74798265	Gene ID= ENSG00000196275.13 TPM= 10.62 Transcript Type= protein_coding
chr7	74832633	74851529	74832633	74851529	-	ENST00000614386.1@GTF2IRD2	ENST00000614386.1	protein_coding	74851367,74836280,74832633	74851529,74836383,74832943	Gene ID= ENSG00000196275.13 TPM= 18.34 Transcript Type= protein_coding
chr7	74879616	74890585	74879616	74890585	-	transcript2373.chr7.nnic@STAG3L2	transcript2373.chr7.nnic	transcribed_unprocessed_pseudogene	74890388,74888312,74887683,74885023,74884434,74884144,74883349,74879616	74890585,74888397,74887799,74885146,74884524,74884223,74883463,74879995	Gene ID= ENSG00000277072.4 TPM= 1.93 Transcript Type= NA
chr7	74879616	74890639	74879616	74890639	-	transcript2377.chr7.nnic@STAG3L2	transcript2377.chr7.nnic	transcribed_unprocessed_pseudogene	74890388,74888312,74887683,74884434,74884144,74883349,74879616	74890639,74888397,74887799,74884524,74884223,74883463,74879995	Gene ID= ENSG00000277072.4 TPM= 5.79 Transcript Type= NA
chr7	74883161	74890639	74883161	74890639	-	transcript2379.chr7.nic@STAG3L2	transcript2379.chr7.nic	transcribed_unprocessed_pseudogene	74890388,74888312,74887683,74884434,74884144,74883728,74883161	74890639,74888397,74887799,74884524,74884223,74883835,74883463	Gene ID= ENSG00000277072.4 TPM= 1.93 Transcript Type= NA
chr7	74883161	74890585	74883161	74890585	-	transcript2384.chr7.nic@STAG3L2	transcript2384.chr7.nic	transcribed_unprocessed_pseudogene	74890388,74888312,74887683,74884434,74883161	74890585,74888397,74887799,74884524,74884223	Gene ID= ENSG00000277072.4 TPM= 2.9 Transcript Type= NA
chr7	74964686	75031528	74964686	75031528	+	transcript2390.chr7.nnic@CASTOR2	transcript2390.chr7.nnic	protein_coding	74964686,75007994,75017598,75017990,75018972,75020039,75021874,75030739	74965098,75008064,75017791,75018122,75019095,75020149,75021956,75031528	Gene ID= ENSG00000274070.1 TPM= 17.38 Transcript Type= NA
chr7	75027361	75031526	75027361	75031526	+	transcript2398.chr7.nnic@NA	transcript2398.chr7.nnic	NA	75027361	75031526	Gene ID= novel_gene_chr7_2399 TPM= 543.47 Transcript Type= NA
chr7	75042183	75073863	75042183	75073863	-	transcript2411.chr7.nnic@RCC1L	transcript2411.chr7.nnic	protein_coding	75073180,75070640,75066664,75064582,75063292,75061207,75058588,75057529,75055901,75052711,75042183	75073863,75070769,75066792,75064648,75063343,75061291,75058769,75057616,75056074,75052796,75043109	Gene ID= ENSG00000274523.4 TPM= 15.44 Transcript Type= NA
chr7	75042183	75073880	75042183	75073880	-	transcript2417.chr7.nnic@RCC1L	transcript2417.chr7.nnic	protein_coding	75073414,75070640,75066664,75064582,75063292,75061207,75058588,75057529,75052711,75042183	75073880,75070769,75066792,75064648,75063343,75061291,75058769,75057616,75052796,75043109	Gene ID= ENSG00000274523.4 TPM= 5.79 Transcript Type= NA
chr7	75042183	75073793	75042183	75073793	-	ENST00000610322.4@RCC1L	ENST00000610322.4	protein_coding	75073414,75070640,75066664,75064582,75063292,75061207,75058588,75057529,75055901,75052711,75042183	75073793,75070769,75066792,75064648,75063343,75061291,75058769,75057616,75056074,75052796,75043109	Gene ID= ENSG00000274523.4 TPM= 189.2 Transcript Type= protein_coding
chr7	75092587	75149814	75092587	75149814	+	transcript2425.chr7.nnic@GTF2IRD2B	transcript2425.chr7.nnic	protein_coding	75092587,75108960,75112397,75120891,75125916,75126342,75133135,75135001,75136785,75138950,75141103,75142482,75143950,75147694	75092765,75109063,75112535,75121010,75125970,75126385,75133212,75135057,75136850,75139027,75141186,75142665,75143993,75149814	Gene ID= ENSG00000174428.16 TPM= 4.83 Transcript Type= NA
chr7	75092581	75149817	75092581	75149817	+	ENST00000472837.5@GTF2IRD2B	ENST00000472837.5	protein_coding	75092581,75108960,75112397,75120891,75123136,75123488,75125916,75126342,75133135,75135001,75136785,75138950,75141103,75142482,75143950,75147694	75092765,75109063,75112535,75121010,75123319,75123516,75125970,75126385,75133212,75135057,75136850,75139027,75141186,75142665,75143978,75149817	Gene ID= ENSG00000174428.16 TPM= 7.72 Transcript Type= protein_coding
chr7	75092600	75112699	75092600	75112699	+	ENST00000614064.4@GTF2IRD2B	ENST00000614064.4	protein_coding	75092600,75108960,75112397	75092765,75109063,75112699	Gene ID= ENSG00000174428.16 TPM= 14.48 Transcript Type= protein_coding
chr7	75185396	75237696	75185396	75237696	-	ENST00000622829.4@GTF2IP1	ENST00000622829.4	transcribed_unprocessed_pseudogene	75237293,75217154,75215756,75213406,75212079,75210528,75209376,75207956,75202542,75201121,75200121,75199651,75197948,75196974,75196613,75194657,75193903,75192899,75192047,75190539,75189215,75188075,75187220,75185396	75237696,75217264,75215821,75213589,75212137,75210599,75209559,75208014,75202613,75201304,75200179,75199725,75198049,75197039,75196796,75194712,75193983,75192980,75192230,75190567,75189256,75188116,75187295,75186527	Gene ID= ENSG00000277053.4 TPM= 27.03 Transcript Type= processed_transcript
chr7	75410350	75416786	75410350	75416786	+	ENST00000393633.6@NSUN5P1	ENST00000393633.6	transcribed_unprocessed_pseudogene	75410350,75411655,75412789,75415120,75415592,75416275	75411574,75411759,75415023,75415234,75416191,75416786	Gene ID= ENSG00000223705.9 TPM= 15.44 Transcript Type= processed_transcript
chr7	75416790	75442652	75416790	75442652	-	transcript2445.chr7.nnic@POM121C	transcript2445.chr7.nnic	protein_coding	75442635,75421509,75419320,75416790	75442652,75422102,75419442,75418893	Gene ID= ENSG00000272391.5 TPM= 15.37 Transcript Type= NA
chr7	75416790	75486271	75416790	75486271	-	ENST00000615331.4@POM121C	ENST00000615331.4	protein_coding	75485864,75475062,75474704,75441432,75440954,75439144,75437515,75426362,75425635,75425074,75424526,75424049,75421509,75419320,75416790	75486271,75475188,75474882,75441647,75441115,75439224,75437686,75426453,75425708,75425195,75424628,75424225,75423203,75419442,75418893	Gene ID= ENSG00000272391.5 TPM= 40.78 Transcript Type= protein_coding
chr7	75878999	75888926	75878999	75888926	+	ENST00000318622.8@RHBDD2	ENST00000318622.8	protein_coding	75878999,75881365,75881829,75883698,75887992	75879260,75881486,75882236,75883848,75888926	Gene ID= ENSG00000005486.16 TPM= 11.1 Transcript Type= protein_coding
chr7	75878948	75888921	75878948	75888921	+	ENST00000006777.10@RHBDD2	ENST00000006777.10	protein_coding	75878948,75881829,75883698,75887992	75879260,75882236,75883848,75888921	Gene ID= ENSG00000005486.16 TPM= 75.78 Transcript Type= protein_coding
chr7	75946709	75986855	75946709	75986855	+	transcript2462.chr7.nic@POR	transcript2462.chr7.nic	protein_coding	75946709,75953989,75972413,75979451,75980339,75981048,75981517,75982224,75983520,75983738,75984777,75985058,75985579,75985923,75986159,75986337	75947244,75954180,75972461,75979579,75980488,75981172,75981606,75982322,75983636,75983856,75984958,75985207,75985849,75986068,75986241,75986855	Gene ID= ENSG00000127948.15 TPM= 21.62 Transcript Type= NA
chr7	75972308	75986855	75972308	75986855	+	transcript2472.chr7.nic@POR	transcript2472.chr7.nic	protein_coding	75972308,75979451,75980339,75981048,75981517,75982224,75983520,75983738,75984777,75985058,75985579,75985923,75986159,75986337	75972461,75979579,75980488,75981172,75981606,75982322,75983636,75983856,75984958,75985207,75985849,75986068,75986241,75986855	Gene ID= ENSG00000127948.15 TPM= 20.66 Transcript Type= NA
chr7	75915079	75986855	75915079	75986855	+	ENST00000461988.5@POR	ENST00000461988.5	protein_coding	75915079,75953989,75972413,75979451,75980339,75981048,75981517,75982224,75983520,75983738,75984777,75985058,75985579,75985923,75986159,75986337	75915179,75954180,75972461,75979579,75980488,75981172,75981606,75982322,75983636,75983856,75984958,75985207,75985849,75986068,75986241,75986855	Gene ID= ENSG00000127948.15 TPM= 114.29 Transcript Type= protein_coding
chr7	75986985	75994681	75986985	75994681	-	transcript2479.chr7.nic@TMEM120A	transcript2479.chr7.nic	protein_coding	75994490,75992439,75992144,75989165,75988421,75988083,75987923,75987718,75987538,75987360,75986985	75994681,75992557,75992260,75989224,75988516,75988341,75987984,75987810,75987602,75987428,75987223	Gene ID= ENSG00000189077.10 TPM= 2.9 Transcript Type= NA
chr7	75986837	75994659	75986837	75994659	-	ENST00000493111.6@TMEM120A	ENST00000493111.6	protein_coding	75994490,75992439,75992144,75989165,75988421,75988252,75988083,75987923,75987718,75987538,75987360,75986837	75994659,75992557,75992260,75989224,75988516,75988341,75988148,75987984,75987810,75987602,75987428,75987285	Gene ID= ENSG00000189077.10 TPM= 3.86 Transcript Type= protein_coding
chr7	75986985	75994574	75986985	75994574	-	ENST00000439537.5@TMEM120A	ENST00000439537.5	protein_coding	75994490,75992439,75992144,75989165,75988421,75988252,75988083,75987923,75987718,75987538,75987360,75986985	75994574,75992557,75992260,75989224,75988516,75988341,75988148,75987984,75987810,75987602,75987428,75987223	Gene ID= ENSG00000189077.10 TPM= 3.86 Transcript Type= protein_coding
chr7	75996342	76047999	75996342	76047999	-	transcript2508.chr7.nnic@STYXL1	transcript2508.chr7.nnic	protein_coding	76047812,76030421,76028642,76021851,76013742,76005259,76003758,76000890,75996342	76047999,76030527,76028703,76021992,76013887,76005404,76003855,76000955,75996599	Gene ID= ENSG00000127952.16 TPM= 1.93 Transcript Type= NA
chr7	76048145	76066590	76048145	76066590	+	transcript2501.chr7.nnic@MDH2	transcript2501.chr7.nnic	protein_coding	76048145,76054830,76057410,76057969,76060373,76063515,76064339,76064802,76066279	76048226,76055063,76057493,76058078,76060498,76063592,76064438,76064953,76066590	Gene ID= ENSG00000146701.11 TPM= 37.72 Transcript Type= NA
chr7	76048051	76049047	76048051	76049047	+	ENST00000461263.2@MDH2	ENST00000461263.2	protein_coding	76048051,76048576	76048226,76049047	Gene ID= ENSG00000146701.11 TPM= 7.72 Transcript Type= protein_coding
chr7	76048067	76067508	76048067	76067508	+	ENST00000315758.9@MDH2	ENST00000315758.9	protein_coding	76048067,76054830,76057410,76057969,76060373,76063515,76064339,76064802,76066279	76048226,76054998,76057493,76058078,76060498,76063592,76064438,76064953,76067508	Gene ID= ENSG00000146701.11 TPM= 99.5 Transcript Type= protein_coding
chr7	76048085	76067506	76048085	76067506	+	ENST00000443006.5@MDH2	ENST00000443006.5	protein_coding	76048085,76057410,76057969,76060373,76063515,76064339,76064802,76066279	76048226,76057493,76058078,76060498,76063592,76064438,76064953,76067506	Gene ID= ENSG00000146701.11 TPM= 9.65 Transcript Type= protein_coding
chr7	76201900	76287286	76201900	76287286	+	ENST00000611745.1@SRRM3	ENST00000611745.1	protein_coding	76201900,76235028,76248188,76259906,76260117,76260874,76261352,76261546,76264765,76265364,76267258,76281441,76282648,76282964,76285615	76202067,76235299,76248289,76260034,76260197,76260903,76261414,76261581,76264815,76265468,76267435,76281802,76282872,76283101,76287286	Gene ID= ENSG00000177679.15 TPM= 1.93 Transcript Type= protein_coding
chr7	76302544	76304295	76302544	76304295	+	ENST00000248553.6@HSPB1	ENST00000248553.6	protein_coding	76302544,76303802,76303984	76303076,76303865,76304295	Gene ID= ENSG00000106211.8 TPM= 3953.69 Transcript Type= protein_coding
chr7	76302688	76304260	76302688	76304260	+	ENST00000447574.1@HSPB1	ENST00000447574.1	protein_coding	76302688,76303984	76303865,76304260	Gene ID= ENSG00000106211.8 TPM= 27.99 Transcript Type= nonsense_mediated_decay
chr7	76326794	76359031	76326794	76359031	-	ENST00000307630.4@YWHAG	ENST00000307630.4	protein_coding	76358722,76326794	76359031,76330233	Gene ID= ENSG00000170027.6 TPM= 97.5 Transcript Type= protein_coding
chr7	76389334	76393797	76389334	76393797	-	transcript2567.chr7.nic@SSC4D	transcript2567.chr7.nic	protein_coding	76393405,76391964,76389334	76393797,76392041,76390375	Gene ID= ENSG00000146700.8 TPM= 1.93 Transcript Type= NA
chr7	76461675	76505991	76461675	76505991	+	transcript2570.chr7.nic@DTX2	transcript2570.chr7.nic	protein_coding	76461675,76463545,76480421,76482508,76492153,76500441,76502298,76503426,76504356,76505374	76461836,76463709,76480777,76483147,76492253,76500520,76502456,76503587,76504445,76505991	Gene ID= ENSG00000091073.19 TPM= 12.07 Transcript Type= NA
chr7	76461676	76505991	76461676	76505991	+	transcript2572.chr7.nic@DTX2	transcript2572.chr7.nic	protein_coding	76461676,76480421,76482508,76492153,76500441,76502298,76503426,76504356,76505374	76461836,76480777,76483147,76492253,76500520,76502456,76503587,76504445,76505991	Gene ID= ENSG00000091073.19 TPM= 10.14 Transcript Type= NA
chr7	76549337	76622275	76549337	76622275	+	transcript2575.chr7.nic@AC004980.1	transcript2575.chr7.nic	transcribed_unprocessed_pseudogene	76549337,76551420,76615494,76621116	76549861,76551522,76615663,76622275	Gene ID= ENSG00000205485.13 TPM= 2.9 Transcript Type= NA
chr7	76609986	76627241	76609986	76627241	-	ENST00000310842.8@POMZP3	ENST00000310842.8	protein_coding	76626708,76626000,76625522,76618183,76611722,76611454,76609986	76627241,76626215,76625683,76618300,76611813,76611591,76610215	Gene ID= ENSG00000146707.14 TPM= 54.06 Transcript Type= protein_coding
chr7	77310751	77416400	77310751	77416400	-	ENST00000257626.11@GSAP	ENST00000257626.11	protein_coding	77416213,77406029,77404559,77397346,77396982,77387360,77382574,77381305,77377286,77376848,77375058,77374070,77362583,77360824,77355555,77355213,77353572,77352944,77349351,77330239,77329333,77328606,77326212,77323647,77321333,77320725,77314370,77313488,77312101,77311841,77310751	77416400,77406105,77404615,77397415,77397035,77387448,77382643,77381354,77377390,77376907,77375101,77374155,77362660,77360901,77355647,77355430,77353641,77353026,77349404,77330367,77329391,77328637,77326273,77323742,77321403,77320819,77314489,77313549,77312202,77311940,77311449	Gene ID= ENSG00000186088.15 TPM= 5.79 Transcript Type= protein_coding
chr7	77537275	77640071	77537275	77640071	+	ENST00000248594.10@PTPN12	ENST00000248594.10	protein_coding	77537275,77571078,77581427,77583555,77585543,77592185,77597842,77600664,77607235,77610765,77610948,77618480,77626705,77632348,77635782,77637018,77638624,77639219	77537645,77571186,77581503,77583650,77585581,77592256,77597901,77600806,77607301,77610842,77611046,77618565,77627675,77632425,77635849,77637048,77638731,77640071	Gene ID= ENSG00000127947.15 TPM= 9.65 Transcript Type= protein_coding
chr7	77696434	77749465	77696434	77749465	+	transcript2595.chr7.nic@RSBN1L	transcript2595.chr7.nic	protein_coding	77696434,77736410,77749424	77697055,77736526,77749465	Gene ID= ENSG00000187257.15 TPM= 7.72 Transcript Type= NA
chr7	77793728	77798580	77793728	77798580	-	ENST00000257663.3@TMEM60	ENST00000257663.3	protein_coding	77798254,77793728	77798580,77794423	Gene ID= ENSG00000135211.5 TPM= 8.69 Transcript Type= protein_coding
chr7	77796510	77799629	77796510	77799629	-	transcript2646.chr7.nnic@NA	transcript2646.chr7.nnic	NA	77796510	77799629	Gene ID= novel_gene_chr7_2647 TPM= 6.76 Transcript Type= NA
chr7	77798767	77957222	77798767	77957222	+	transcript2602.chr7.nnic@PHTF2	transcript2602.chr7.nnic	protein_coding	77798767,77840221,77893608,77893903,77900711,77901762,77908793,77910245,77920279,77922623,77929109,77937710,77940030,77940528,77942700,77949678,77951617,77953769,77954858	77798971,77840300,77893664,77893993,77900780,77901920,77908958,77910409,77920465,77922778,77929327,77937838,77940302,77940659,77942786,77949833,77951712,77953894,77957222	Gene ID= ENSG00000006576.16 TPM= 3.93 Transcript Type= NA
chr7	77798830	77957222	77798830	77957222	+	transcript2603.chr7.nnic@PHTF2	transcript2603.chr7.nnic	protein_coding	77798830,77840221,77893608,77893940,77900711,77901762,77908793,77910245,77920279,77922623,77929109,77937710,77940030,77940528,77942700,77949678,77951617,77953769,77954858	77798971,77840300,77893664,77893993,77900780,77901920,77908958,77910409,77920465,77922778,77929327,77937838,77940302,77940659,77942786,77949833,77951712,77953894,77957222	Gene ID= ENSG00000006576.16 TPM= 5.86 Transcript Type= NA
chr7	77798823	77957222	77798823	77957222	+	transcript2608.chr7.nic@PHTF2	transcript2608.chr7.nic	protein_coding	77798823,77840221,77893608,77893982,77900711,77901762,77908793,77910245,77920279,77922623,77929109,77940030,77940528,77942700,77949678,77951617,77953769,77954858	77798971,77840300,77893664,77893993,77900780,77901920,77908958,77910409,77920465,77922778,77929327,77940302,77940659,77942786,77949833,77951712,77953894,77957222	Gene ID= ENSG00000006576.16 TPM= 3.54 Transcript Type= NA
chr7	77798821	77924151	77798821	77924151	+	transcript2627.chr7.nnic@PHTF2	transcript2627.chr7.nnic	protein_coding	77798821,77840221,77893608,77893903,77900711,77901762,77908793,77910245,77920279,77922623	77798971,77840300,77893664,77893993,77900780,77901920,77908958,77910409,77920465,77924151	Gene ID= ENSG00000006576.16 TPM= 2.9 Transcript Type= NA
chr7	77798830	77924151	77798830	77924151	+	transcript2630.chr7.nnic@PHTF2	transcript2630.chr7.nnic	protein_coding	77798830,77840221,77893608,77893940,77900711,77901762,77908793,77910245,77920279,77922623	77798971,77840300,77893664,77893993,77900780,77901920,77908958,77910409,77920465,77924151	Gene ID= ENSG00000006576.16 TPM= 6.76 Transcript Type= NA
chr7	77798767	77924151	77798767	77924151	+	transcript2633.chr7.nic@PHTF2	transcript2633.chr7.nic	protein_coding	77798767,77840221,77893608,77893982,77900711,77901762,77908793,77910245,77920279,77922623	77798971,77840300,77893664,77893993,77900780,77901920,77908958,77910409,77920465,77924151	Gene ID= ENSG00000006576.16 TPM= 3.86 Transcript Type= NA
chr7	77798805	77957225	77798805	77957225	+	ENST00000307305.12@PHTF2	ENST00000307305.12	protein_coding	77798805,77840221,77893608,77900711,77901762,77908793,77910245,77920279,77922623,77929109,77937710,77940030,77940528,77942700,77949678,77951617,77953769,77954858	77798971,77840300,77893664,77900780,77901920,77908958,77910409,77920465,77922778,77929327,77937838,77940302,77940659,77942786,77949833,77951712,77953894,77957225	Gene ID= ENSG00000006576.16 TPM= 16.48 Transcript Type= protein_coding
chr7	77798888	77923392	77798888	77923392	+	ENST00000415251.6@PHTF2	ENST00000415251.6	protein_coding	77798888,77840221,77893608,77900711,77901762,77908793,77910245,77920279,77922623	77798971,77840300,77893664,77900780,77901920,77908958,77910409,77920465,77923392	Gene ID= ENSG00000006576.16 TPM= 1.93 Transcript Type= protein_coding
chr7	77840180	77957222	77840180	77957222	+	ENST00000248550.7@PHTF2	ENST00000248550.7	protein_coding	77840180,77854733,77893608,77893982,77900711,77901762,77908793,77910245,77920279,77922623,77929109,77937710,77940030,77940528,77942700,77949678,77951617,77953769,77954858	77840300,77854834,77893664,77893993,77900780,77901920,77908958,77910409,77920465,77922778,77929327,77937838,77940302,77940659,77942786,77949833,77951712,77953894,77957222	Gene ID= ENSG00000006576.16 TPM= 2 Transcript Type= protein_coding
chr7	78018810	78019891	78018810	78019891	-	transcript2648.chr7.nnic@NA	transcript2648.chr7.nnic	NA	78018810	78019891	Gene ID= novel_gene_chr7_2649 TPM= 3.86 Transcript Type= NA
chr7	80134788	80219402	80134788	80219402	+	ENST00000351004.7@GNAI1	ENST00000351004.7	protein_coding	80134788,80188951,80189090,80199225,80203704,80210969,80212716,80217303	80135278,80188993,80189231,80199382,80203832,80211098,80212869,80219402	Gene ID= ENSG00000127955.15 TPM= 9.65 Transcript Type= protein_coding
chr7	80602169	80679277	80602169	80679277	+	transcript2662.chr7.nic@CD36	transcript2662.chr7.nic	protein_coding	80602169,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676384	80602379,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80679277	Gene ID= ENSG00000135218.17 TPM= 5.31 Transcript Type= NA
chr7	80638641	80677005	80638641	80677005	+	transcript2665.chr7.nic@CD36	transcript2665.chr7.nic	protein_coding	80638641,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676108	80638746,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80677005	Gene ID= ENSG00000135218.17 TPM= 2.9 Transcript Type= NA
chr7	80602150	80674409	80602150	80674409	+	ENST00000309881.11@CD36	ENST00000309881.11	protein_coding	80602150,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80602379,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674409	Gene ID= ENSG00000135218.17 TPM= 13.83 Transcript Type= protein_coding
chr7	80638676	80674416	80638676	80674416	+	ENST00000394788.7@CD36	ENST00000394788.7	protein_coding	80638676,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80638746,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416	Gene ID= ENSG00000135218.17 TPM= 19.62 Transcript Type= protein_coding
chr7	80638676	80677008	80638676	80677008	+	ENST00000447544.6@CD36	ENST00000447544.6	protein_coding	80638676,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676384	80638746,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80677008	Gene ID= ENSG00000135218.17 TPM= 17.38 Transcript Type= protein_coding
chr7	80646329	80674416	80646329	80674416	+	ENST00000432207.5@CD36	ENST00000432207.5	protein_coding	80646329,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80646359,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416	Gene ID= ENSG00000135218.17 TPM= 2.25 Transcript Type= protein_coding
chr7	80742538	80919351	80742538	80919351	-	ENST00000265361.7@SEMA3C	ENST00000265361.7	protein_coding	80918828,80916679,80828585,80827425,80818299,80810611,80805639,80804106,80802665,80800757,80798092,80789306,80765155,80761616,80758331,80751269,80748898,80742538	80919351,80916819,80828745,80827487,80818418,80810701,80805758,80804248,80802779,80800826,80798236,80789528,80765243,80761657,80758488,80751336,80749028,80745307	Gene ID= ENSG00000075223.13 TPM= 24.13 Transcript Type= protein_coding
chr7	81946444	82443940	81946444	82443940	-	transcript2694.chr7.nnic@CACNA2D1	transcript2694.chr7.nnic	protein_coding	82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82005423,81997179,81994868,81991185,81984635,81983314,81982567,81974455,81971777,81970675,81969881,81968887,81967596,81967169,81965594,81964207,81964056,81962440,81961894,81959720,81959275,81946444	82443940,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497,81997235,81994939,81991246,81984711,81983334,81982627,81974552,81971864,81970737,81969984,81968973,81967663,81967207,81965665,81964359,81964108,81962495,81962023,81959829,81959357,81950508	Gene ID= ENSG00000153956.15 TPM= 13.51 Transcript Type= NA
chr7	82001676	82443940	82001676	82443940	-	transcript2699.chr7.nic@CACNA2D1	transcript2699.chr7.nic	protein_coding	82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82005423,82001676	82443940,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497,82001715	Gene ID= ENSG00000153956.15 TPM= 2.9 Transcript Type= NA
chr7	82003745	82443940	82003745	82443940	-	transcript2701.chr7.nic@CACNA2D1	transcript2701.chr7.nic	protein_coding	82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82003745	82443940,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497	Gene ID= ENSG00000153956.15 TPM= 1.93 Transcript Type= NA
chr7	82297620	82443597	82297620	82443597	-	transcript2711.chr7.nnic@CACNA2D1	transcript2711.chr7.nnic	protein_coding	82443365,82349568,82335135,82297620	82443597,82349649,82335251,82300151	Gene ID= ENSG00000153956.15 TPM= 2.9 Transcript Type= NA
chr7	87152435	87196323	87152435	87196323	+	transcript2726.chr7.nic@DMTF1	transcript2726.chr7.nic	protein_coding	87152435,87163495,87164934,87170995,87173535,87174593,87179545,87181309,87182228,87184397,87185829,87188092,87190945,87193198,87193725,87194684,87195031	87152555,87163617,87165050,87171089,87173649,87174669,87179702,87181341,87182337,87184625,87185980,87188301,87191027,87193353,87194102,87194828,87196323	Gene ID= ENSG00000135164.18 TPM= 1.93 Transcript Type= NA
chr7	87152412	87196325	87152412	87196325	+	ENST00000579677.5@DMTF1	ENST00000579677.5	protein_coding	87152412,87163495,87164934,87166483,87170995,87173535,87174593,87179545,87181309,87182056,87184397,87185829,87188092,87190945,87193198,87193725,87194684,87195031	87152555,87163617,87165050,87166605,87171089,87173649,87174669,87179702,87181341,87182337,87184625,87185980,87188301,87191027,87193353,87194102,87194828,87196325	Gene ID= ENSG00000135164.18 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr7	87325347	87345526	87325347	87345526	-	transcript2732.chr7.nnic@TP53TG1	transcript2732.chr7.nnic	lincRNA	87345043,87341523,87326263,87325347	87345526,87341684,87326449,87325444	Gene ID= ENSG00000182165.17 TPM= 1.93 Transcript Type= NA
chr7	87325350	87345486	87325350	87345486	-	ENST00000421293.1@TP53TG1	ENST00000421293.1	lincRNA	87345305,87341523,87325350	87345486,87341684,87325444	Gene ID= ENSG00000182165.17 TPM= 4.83 Transcript Type= lincRNA
chr7	87345695	87399795	87345695	87399795	+	ENST00000331536.7@CROT	ENST00000331536.7	protein_coding	87345695,87346340,87349048,87359206,87361390,87361728,87369376,87375632,87375828,87377349,87381910,87382074,87382413,87391589,87392566,87392730,87392948,87398524	87345767,87346430,87349183,87359330,87361571,87361852,87369484,87375725,87375953,87377450,87381993,87382181,87382543,87391712,87392644,87392823,87393067,87399795	Gene ID= ENSG00000005469.11 TPM= 4.83 Transcript Type= protein_coding
chr7	87472752	87475836	87472752	87475836	-	transcript2744.chr7.nic@ABCB4	transcript2744.chr7.nic	protein_coding	87475634,87472752	87475836,87475471	Gene ID= ENSG00000005471.15 TPM= 1.93 Transcript Type= NA
chr7	87402045	87475703	87402045	87475703	-	ENST00000358400.7@ABCB4	ENST00000358400.7	protein_coding	87475634,87475386,87472621,87462758,87454535,87452944,87451623,87449968,87447034,87444862,87443663,87443319,87440199,87439667,87431404,87426750,87423906,87422121,87419998,87418537,87417312,87413617,87409236,87408037,87406288,87403135,87402045	87475703,87475471,87472675,87462908,87454592,87453135,87451794,87450092,87447205,87444975,87443773,87443444,87440402,87439837,87431565,87426920,87424052,87422225,87420075,87418620,87417515,87413717,87409392,87408234,87406494,87403281,87402302	Gene ID= ENSG00000005471.15 TPM= 1.93 Transcript Type= protein_coding
chr7	87833568	87876349	87833568	87876349	-	ENST00000341119.9@SLC25A40	ENST00000341119.9	protein_coding	87876096,87860572,87858631,87856292,87854204,87849881,87847853,87846949,87843754,87841633,87836730,87833568	87876349,87860640,87858751,87856351,87854310,87849948,87847977,87847122,87843863,87841714,87836810,87836361	Gene ID= ENSG00000075303.12 TPM= 1.93 Transcript Type= protein_coding
chr7	88205118	88220079	88205118	88220079	-	ENST00000265729.6@SRI	ENST00000265729.6	protein_coding	88219976,88218859,88217122,88210882,88209983,88209339,88208507,88205118	88220079,88218942,88217191,88210925,88210130,88209452,88208565,88206504	Gene ID= ENSG00000075142.13 TPM= 21.24 Transcript Type= protein_coding
chr7	88276429	88307060	88276429	88307060	-	transcript2755.chr7.nic@STEAP4	transcript2755.chr7.nic	protein_coding	88306792,88290916,88283814,88282641,88280915,88276429	88307060,88291014,88284271,88283168,88281079,88279628	Gene ID= ENSG00000127954.12 TPM= 10.62 Transcript Type= NA
chr7	88270892	88306891	88270892	88306891	-	ENST00000380079.8@STEAP4	ENST00000380079.8	protein_coding	88306792,88283814,88282641,88280915,88270892	88306891,88284271,88283168,88281079,88279628	Gene ID= ENSG00000127954.12 TPM= 4.83 Transcript Type= protein_coding
chr7	90346704	90385185	90346704	90385185	+	transcript2771.chr7.nnic@GTPBP10	transcript2771.chr7.nnic	protein_coding	90346704,90374302,90377507,90378134,90382956,90384892	90346774,90374354,90377614,90378211,90383079,90385185	Gene ID= ENSG00000105793.15 TPM= 2.9 Transcript Type= NA
chr7	90403386	90415954	90403386	90415954	+	ENST00000287916.8@CLDN12	ENST00000287916.8	protein_coding	90403386,90405519,90412644	90403549,90405608,90415954	Gene ID= ENSG00000157224.15 TPM= 22.2 Transcript Type= protein_coding
chr7	90403467	90415954	90403467	90415954	+	ENST00000394605.2@CLDN12	ENST00000394605.2	protein_coding	90403467,90405519,90412644	90403549,90405612,90415954	Gene ID= ENSG00000157224.15 TPM= 8.69 Transcript Type= protein_coding
chr7	90590623	90595890	90590623	90595890	-	ENST00000441971.5@AC002456.1	ENST00000441971.5	antisense_RNA	90595733,90591716,90590623	90595890,90591901,90590728	Gene ID= ENSG00000223969.5 TPM= 1.93 Transcript Type= antisense_RNA
chr7	91264433	91268715	91264433	91268715	+	transcript2782.chr7.nnic@NA	transcript2782.chr7.nnic	NA	91264433	91268715	Gene ID= novel_gene_chr7_2783 TPM= 8.69 Transcript Type= NA
chr7	91886980	91889711	91886980	91889711	+	transcript2788.chr7.nnic@NA	transcript2788.chr7.nnic	NA	91886980	91889711	Gene ID= novel_gene_chr7_2789 TPM= 1.93 Transcript Type= NA
chr7	91940857	92000876	91940857	92000876	+	transcript2792.chr7.nic@AKAP9	transcript2792.chr7.nic	protein_coding	91940857,91973711,91980289,91992158,91992885,91994621,91995603,92000848	91941147,91973968,91980333,91992211,91993055,91994776,91995800,92000876	Gene ID= ENSG00000127914.16 TPM= 2.9 Transcript Type= NA
chr7	92112151	92134530	92112151	92134530	-	ENST00000003100.12@CYP51A1	ENST00000003100.12	protein_coding	92134173,92131774,92128880,92127505,92126253,92123734,92123120,92118520,92117044,92112151	92134530,92131872,92129056,92127631,92126427,92123853,92123315,92118615,92117212,92113843	Gene ID= ENSG00000001630.15 TPM= 27.99 Transcript Type= protein_coding
chr7	92245966	92399348	92245966	92399348	+	transcript2806.chr7.nnic@ANKIB1	transcript2806.chr7.nnic	protein_coding	92245966,92246213,92294889,92307359,92319330,92327783,92343024,92344978,92350950,92352476,92362185,92371477,92386509,92387798,92387975,92389971,92391166,92392241,92396365,92397723,92398212	92246098,92246519,92295166,92307656,92319512,92327900,92343232,92345066,92351094,92352642,92362273,92371607,92386643,92387884,92388041,92390116,92391344,92392292,92396476,92397859,92399348	Gene ID= ENSG00000001629.9 TPM= 3.86 Transcript Type= NA
chr7	92487020	92528531	92487020	92528531	-	ENST00000248633.8@PEX1	ENST00000248633.8	protein_coding	92528307,92522102,92518995,92518141,92517276,92513848,92511580,92510944,92509329,92506994,92506248,92504732,92503041,92501890,92501507,92499704,92496713,92494487,92494293,92492953,92491272,92489714,92489293,92487020	92528531,92522245,92519078,92518255,92518042,92513967,92511703,92511047,92509411,92507126,92506344,92504902,92503195,92502079,92501673,92499838,92496777,92494629,92494396,92493129,92491502,92489911,92489423,92487541	Gene ID= ENSG00000127980.15 TPM= 23.17 Transcript Type= protein_coding
chr7	92528773	92537534	92528773	92537534	+	ENST00000265732.9@RBM48	ENST00000265732.9	protein_coding	92528773,92529476,92532404,92534402,92536851	92528924,92529666,92532549,92534970,92537534	Gene ID= ENSG00000127993.15 TPM= 17.38 Transcript Type= protein_coding
chr7	92528795	92537534	92528795	92537534	+	transcript2838.chr7.nic@RBM48	transcript2838.chr7.nic	protein_coding	92528795,92529476,92532404,92534402,92536851	92529183,92529666,92532549,92534970,92537534	Gene ID= ENSG00000127993.15 TPM= 1.93 Transcript Type= NA
chr7	92561103	92590394	92561103	92590394	-	ENST00000445716.5@FAM133B	ENST00000445716.5	protein_coding	92590268,92581506,92579317,92578319,92578150,92577655,92577103,92575771,92569823,92566014,92561103	92590394,92581603,92579395,92578393,92578182,92577717,92577195,92575821,92569915,92566061,92562368	Gene ID= ENSG00000234545.7 TPM= 1.93 Transcript Type= protein_coding
chr7	92606639	92609161	92606639	92609161	-	transcript2846.chr7.nnic@NA	transcript2846.chr7.nnic	NA	92606639	92609161	Gene ID= novel_gene_chr7_2847 TPM= 2.9 Transcript Type= NA
chr7	93232340	93359026	93232340	93359026	+	ENST00000305866.9@VPS50	ENST00000305866.9	protein_coding	93232340,93239866,93252653,93253860,93256509,93257394,93258159,93258357,93259550,93271220,93272635,93276165,93291703,93294545,93296742,93297145,93303460,93305828,93308824,93311166,93323611,93334117,93341427,93348711,93349875,93353640,93355891,93358317	93232500,93239934,93252775,93253931,93256562,93257464,93258276,93258392,93259632,93271262,93272733,93276305,93291835,93294636,93296836,93297243,93303550,93306004,93308942,93311272,93323732,93334197,93341575,93348807,93350033,93353761,93356080,93359026	Gene ID= ENSG00000004766.15 TPM= 7.72 Transcript Type= protein_coding
chr7	93232342	93359527	93232342	93359527	+	transcript2853.chr7.nnic@VPS50	transcript2853.chr7.nnic	protein_coding	93232342,93239866,93252653,93253860,93256509,93257394,93258159,93258357,93259550,93271220,93272635,93276165,93291703,93294545,93296742,93297145,93303460,93308824,93311166,93323611,93334117,93341427,93348711,93349875,93353640,93355891,93358317	93232500,93239934,93252775,93253931,93256562,93257464,93258276,93258392,93259632,93271262,93272733,93276305,93291835,93294636,93296836,93297243,93303550,93308942,93311272,93323732,93334197,93341575,93348807,93350033,93353761,93356080,93359527	Gene ID= ENSG00000004766.15 TPM= 1.93 Transcript Type= NA
chr7	93921699	93928610	93921699	93928610	+	ENST00000248564.5@GNG11	ENST00000248564.5	protein_coding	93921699,93926091	93922233,93928610	Gene ID= ENSG00000127920.5 TPM= 34.75 Transcript Type= protein_coding
chr7	93993242	94004375	93993242	94004375	-	ENST00000222547.7@BET1	ENST00000222547.7	protein_coding	94004198,93999170,93996265,93993242	94004375,93999294,93996321,93994385	Gene ID= ENSG00000105829.11 TPM= 4.83 Transcript Type= protein_coding
chr7	94394561	94431232	94394561	94431232	+	ENST00000297268.10@COL1A2	ENST00000297268.10	protein_coding	94394561,94397748,94398382,94399049,94400196,94401567,94404556,94404693,94404839,94405199,94405673,94406250,94407847,94408183,94408336,94408770,94409322,94409564,94409723,94410242,94410420,94410889,94411056,94412068,94412584,94413083,94413690,94413894,94414222,94415226,94416405,94417724,94418499,94419498,94420233,94420391,94420541,94421009,94421899,94422957,94424336,94425117,94425610,94425750,94425998,94426423,94427008,94427188,94427627,94428293,94429188,94430247	94395101,94397758,94398396,94399084,94400288,94401620,94404600,94404746,94404892,94405252,94405726,94406303,94407891,94408236,94408380,94408823,94409420,94409608,94409821,94410295,94410527,94410942,94411154,94412121,94412682,94413136,94413743,94413947,94414275,94415270,94416503,94417831,94418552,94419551,94420286,94420444,94420648,94421062,94421952,94423118,94424443,94425224,94425663,94425857,94426051,94426530,94427061,94427295,94427885,94428477,94429430,94431232	Gene ID= ENSG00000164692.17 TPM= 20.27 Transcript Type= protein_coding
chr7	94394914	94430703	94394914	94430703	+	ENST00000620463.1@COL1A2	ENST00000620463.1	protein_coding	94394914,94398374,94398382,94399049,94400196,94401567,94404556,94404693,94404839,94405199,94405673,94406250,94407847,94408183,94408336,94408770,94409322,94409564,94409723,94410242,94410420,94410889,94411056,94412068,94412584,94413083,94413690,94413894,94414222,94415226,94416405,94417724,94418499,94419498,94420233,94420391,94420541,94421009,94421899,94422957,94424336,94425117,94425610,94425750,94425998,94426423,94427008,94427188,94427627,94428293,94429188,94430247	94395101,94398378,94398396,94399084,94400288,94401620,94404600,94404746,94404892,94405252,94405726,94406303,94407891,94408236,94408380,94408823,94409420,94409608,94409821,94410295,94410527,94410942,94411154,94412121,94412682,94413136,94413743,94413947,94414275,94415270,94416503,94417831,94418552,94419551,94420286,94420444,94420648,94421062,94421952,94423118,94424443,94425224,94425663,94425857,94426051,94426530,94427061,94427295,94427885,94428477,94429430,94430703	Gene ID= ENSG00000164692.17 TPM= 9.65 Transcript Type= protein_coding
chr7	94509847	94556965	94509847	94556965	+	transcript2875.chr7.nic@CASD1	transcript2875.chr7.nic	protein_coding	94509847,94517560,94518203,94527162,94528188,94533205,94533679,94535309,94537472,94538967,94544411,94545545,94547096,94549533,94551338,94552350,94554483	94510217,94517656,94518323,94527206,94528250,94533249,94533802,94535523,94537894,94539056,94544530,94545701,94547175,94549634,94551478,94552427,94556965	Gene ID= ENSG00000127995.16 TPM= 1.93 Transcript Type= NA
chr7	94509798	94557019	94509798	94557019	+	ENST00000297273.8@CASD1	ENST00000297273.8	protein_coding	94509798,94517560,94518203,94527162,94528188,94533205,94533679,94535309,94537472,94538967,94544411,94545545,94547096,94549533,94551338,94552350,94554483,94555492	94510217,94517656,94518323,94527206,94528250,94533249,94533802,94535523,94537894,94539056,94544530,94545701,94547175,94549634,94551478,94552427,94554575,94557019	Gene ID= ENSG00000127995.16 TPM= 8.69 Transcript Type= protein_coding
chr7	94585230	94656209	94585230	94656209	-	ENST00000265735.11@SGCE	ENST00000265735.11	protein_coding	94655990,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94588689,94585230	94656209,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94588732,94585515	Gene ID= ENSG00000127990.15 TPM= 1.93 Transcript Type= protein_coding
chr7	94907723	95250087	94907723	95250087	+	transcript2891.chr7.nnic@PPP1R9A	transcript2891.chr7.nnic	protein_coding	94907723,94909898,95074520,95111259,95120712,95161867,95198349,95203665,95225961,95247473,95250026	94908139,94911508,95074824,95111391,95120832,95161971,95198484,95203730,95226116,95247526,95250087	Gene ID= ENSG00000158528.11 TPM= 1.93 Transcript Type= NA
chr7	94907723	95251789	94907723	95251789	+	transcript2894.chr7.nic@PPP1R9A	transcript2894.chr7.nic	protein_coding	94907723,94909898,95111259,95120712,95161867,95198349,95225961,95247473,95250026,95251762	94908139,94911508,95111391,95120832,95161971,95198484,95226116,95247526,95250255,95251789	Gene ID= ENSG00000158528.11 TPM= 1.93 Transcript Type= NA
chr7	94907723	95203815	94907723	95203815	+	transcript2897.chr7.nnic@PPP1R9A	transcript2897.chr7.nnic	protein_coding	94907723,94909898,95111259,95120712,95161867,95198349,95202571	94908139,94911508,95111391,95120832,95161971,95198484,95203815	Gene ID= ENSG00000158528.11 TPM= 1.93 Transcript Type= NA
chr7	95404863	95434999	95404863	95434999	-	transcript2901.chr7.nnic@PON2	transcript2901.chr7.nnic	protein_coding	95434878,95424515,95416242,95412312,95411653,95409901,95406987,95406119,95404863	95434999,95424585,95416297,95412451,95411779,95410101,95407068,95406247,95405488	Gene ID= ENSG00000105854.12 TPM= 1.93 Transcript Type= NA
chr7	95485901	95540232	95485901	95540232	+	ENST00000325885.5@ASB4	ENST00000325885.5	protein_coding	95485901,95495758,95527813,95536437,95537571	95486158,95496057,95528303,95536550,95540232	Gene ID= ENSG00000005981.12 TPM= 15.93 Transcript Type= protein_coding
chr7	95485890	95540232	95485890	95540232	+	transcript2909.chr7.nnic@ASB4	transcript2909.chr7.nnic	protein_coding	95485890,95527813,95536437,95537571	95486158,95528303,95536550,95540232	Gene ID= ENSG00000005981.12 TPM= 9.17 Transcript Type= NA
chr7	95485911	95496249	95485911	95496249	+	transcript2910.chr7.nic@ASB4	transcript2910.chr7.nic	protein_coding	95485911,95495758	95486158,95496249	Gene ID= ENSG00000005981.12 TPM= 1.93 Transcript Type= NA
chr7	95583499	95596491	95583499	95596491	-	ENST00000005178.5@PDK4	ENST00000005178.5	protein_coding	95596164,95595023,95593699,95592760,95592511,95591988,95589640,95587727,95587418,95587010,95583499	95596491,95595164,95593770,95592944,95592597,95592065,95589716,95587825,95587528,95587123,95585781	Gene ID= ENSG00000004799.7 TPM= 1135.35 Transcript Type= protein_coding
chr7	95594432	95596519	95594432	95596519	-	transcript2971.chr7.nnic@NA	transcript2971.chr7.nnic	NA	95594432	95596519	Gene ID= novel_gene_chr7_2972 TPM= 54.54 Transcript Type= NA
chr7	95772554	96098424	95772554	96098424	+	ENST00000447467.6@DYNC1I1	ENST00000447467.6	protein_coding	95772554,95804721,95810392,95813247,95828057,95869883,95977512,95984815,95987056,95995948,96028175,96032667,96035619,96039277,96076057,96080363,96097483	95772773,95804837,95810506,95813337,95828116,95869998,95977601,95984977,95987155,95996073,96028321,96032780,96035752,96039421,96076197,96080488,96098424	Gene ID= ENSG00000158560.14 TPM= 14.96 Transcript Type= protein_coding
chr7	95772598	96098424	95772598	96098424	+	ENST00000359388.8@DYNC1I1	ENST00000359388.8	protein_coding	95772598,95804721,95810392,95813247,95869883,95977512,95984815,95987056,95995948,96028175,96032667,96035619,96039277,96076057,96080363,96097483	95772773,95804837,95810506,95813337,95869998,95977601,95984977,95987155,95996073,96028321,96032780,96035752,96039421,96076197,96080488,96098424	Gene ID= ENSG00000158560.14 TPM= 6.27 Transcript Type= protein_coding
chr7	95772604	95818963	95772604	95818963	+	ENST00000413338.5@DYNC1I1	ENST00000413338.5	protein_coding	95772604,95804721,95810392,95813247,95818499	95772773,95804837,95810506,95813337,95818963	Gene ID= ENSG00000158560.14 TPM= 1.93 Transcript Type= protein_coding
chr7	96120221	96322136	96120221	96322136	-	transcript2980.chr7.nnic@SLC25A13	transcript2980.chr7.nnic	protein_coding	96321942,96296898,96277196,96234802,96208838,96193037,96191109,96189581,96189294,96184927,96184277,96171472,96170045,96169869,96146556,96131743,96121839,96121655,96120221	96322136,96296951,96277338,96234917,96208977,96193183,96191247,96189674,96189378,96185011,96184435,96171524,96170125,96169943,96146696,96131881,96121997,96121745,96121377	Gene ID= ENSG00000004864.13 TPM= 3.86 Transcript Type= NA
chr7	96120415	96322063	96120415	96322063	-	transcript2984.chr7.nnic@SLC25A13	transcript2984.chr7.nnic	protein_coding	96321942,96296898,96277196,96208838,96193037,96191109,96189581,96189294,96184927,96184277,96171472,96170045,96169869,96146556,96131743,96121839,96121655,96120415	96322063,96296951,96277338,96208977,96193183,96191247,96189674,96189378,96185011,96184435,96171524,96170149,96169943,96146696,96131881,96121997,96121745,96121377	Gene ID= ENSG00000004864.13 TPM= 1.93 Transcript Type= NA
chr7	96687951	96709891	96687951	96709891	-	ENST00000248566.3@SEM1	ENST00000248566.3	protein_coding	96709688,96694798,96687951	96709891,96694891,96688966	Gene ID= ENSG00000127922.9 TPM= 2.9 Transcript Type= protein_coding
chr7	96649195	96709858	96649195	96709858	-	ENST00000444799.5@SEM1	ENST00000444799.5	protein_coding	96709688,96694798,96649195	96709858,96694891,96650519	Gene ID= ENSG00000127922.9 TPM= 5.79 Transcript Type= protein_coding
chr7	96707653	96709864	96707653	96709864	-	transcript2995.chr7.nnic@NA	transcript2995.chr7.nnic	NA	96707653	96709864	Gene ID= novel_gene_chr7_2996 TPM= 1.93 Transcript Type= NA
chr7	97116590	97181763	97116590	97181763	+	ENST00000432641.2@SDHAF3	ENST00000432641.2	protein_coding	97116590,97181012	97117897,97181763	Gene ID= ENSG00000196636.7 TPM= 17.38 Transcript Type= protein_coding
chr7	97966589	97972352	97966589	97972352	-	transcript3010.chr7.nnic@AC079781.5	transcript3010.chr7.nnic	processed_transcript	97972135,97969770,97966589	97972352,97969845,97966977	Gene ID= ENSG00000284707.1 TPM= 1.93 Transcript Type= NA
chr7	97966596	97972352	97966596	97972352	-	transcript3009.chr7.nnic@AC004967.1	transcript3009.chr7.nnic	transcribed_unprocessed_pseudogene	97972135,97969770,97969005,97966596	97972352,97969845,97969052,97966977	Gene ID= ENSG00000243554.1 TPM= 11.58 Transcript Type= NA
chr7	98106885	98209633	98106885	98209633	+	ENST00000297293.5@LMTK2	ENST00000297293.5	protein_coding	98106885,98137315,98141397,98151382,98154758,98159338,98171541,98185051,98186877,98190728,98191614,98203574,98203944,98205464	98107280,98137442,98141541,98151455,98154876,98159425,98171674,98185135,98186998,98190877,98194572,98203706,98204186,98209633	Gene ID= ENSG00000164715.5 TPM= 20.27 Transcript Type= protein_coding
chr7	98214624	98252251	98214624	98252251	-	ENST00000447648.6@TECPR1	ENST00000447648.6	protein_coding	98252126,98251394,98245922,98244885,98244571,98243467,98241070,98240851,98238509,98236776,98233421,98232827,98231804,98231224,98230961,98229039,98228014,98225006,98224801,98223662,98222990,98222386,98221661,98217936,98217692,98214624	98252251,98251548,98246165,98245067,98244693,98243592,98241244,98240951,98238610,98236921,98233911,98232972,98231959,98231373,98231118,98229166,98228116,98225102,98224880,98223718,98223170,98222521,98221753,98218042,98217811,98217503	Gene ID= ENSG00000205356.9 TPM= 2.9 Transcript Type= protein_coding
chr7	98281970	98291524	98281970	98291524	+	transcript3035.chr7.nic@BRI3	transcript3035.chr7.nic	protein_coding	98281970,98291111	98282453,98291524	Gene ID= ENSG00000164713.9 TPM= 8.21 Transcript Type= NA
chr7	98283540	98291455	98283540	98291455	+	transcript3036.chr7.nnic@BRI3	transcript3036.chr7.nnic	protein_coding	98283540,98291111	98283855,98291455	Gene ID= ENSG00000164713.9 TPM= 6.76 Transcript Type= NA
chr7	98283540	98291522	98283540	98291522	+	transcript3037.chr7.nnic@BRI3	transcript3037.chr7.nnic	protein_coding	98283540,98291111	98283855,98291522	Gene ID= ENSG00000164713.9 TPM= 21.24 Transcript Type= NA
chr7	98286481	98291457	98286481	98291457	+	transcript3038.chr7.nnic@BRI3	transcript3038.chr7.nnic	protein_coding	98286481,98291111	98286540,98291457	Gene ID= ENSG00000164713.9 TPM= 1.93 Transcript Type= NA
chr7	98286481	98291524	98286481	98291524	+	transcript3039.chr7.nnic@BRI3	transcript3039.chr7.nnic	protein_coding	98286481,98291111	98286540,98291524	Gene ID= ENSG00000164713.9 TPM= 26.06 Transcript Type= NA
chr7	98281675	98291524	98281675	98291524	+	ENST00000297290.3@BRI3	ENST00000297290.3	protein_coding	98281675,98282351,98291111	98281937,98282453,98291524	Gene ID= ENSG00000164713.9 TPM= 109.56 Transcript Type= protein_coding
chr7	98289478	98291522	98289478	98291522	+	transcript3040.chr7.nnic@NA	transcript3040.chr7.nnic	NA	98289478	98291522	Gene ID= novel_gene_chr7_3041 TPM= 5.79 Transcript Type= NA
chr7	98306735	98310440	98306735	98310440	+	transcript3042.chr7.nnic@NA	transcript3042.chr7.nnic	NA	98306735	98310440	Gene ID= novel_gene_chr7_3043 TPM= 3.86 Transcript Type= NA
chr7	99325910	99366257	99325910	99366257	+	ENST00000262942.9@ARPC1A	ENST00000262942.9	protein_coding	99325910,99333325,99338181,99344293,99348852,99353909,99358340,99359545,99363543,99365891	99326004,99333417,99338285,99344515,99348959,99354121,99358415,99359738,99363633,99366257	Gene ID= ENSG00000241685.9 TPM= 74.33 Transcript Type= protein_coding
chr7	99374675	99394801	99374675	99394801	+	ENST00000252725.9@ARPC1B	ENST00000252725.9	protein_coding	99374675,99385702,99386685,99388039,99389905,99390893,99391178,99392671,99394029,99394451	99374781,99385778,99386789,99388261,99390012,99391099,99391253,99392876,99394119,99394801	Gene ID= ENSG00000130429.12 TPM= 17.38 Transcript Type= protein_coding
chr7	99394963	99408829	99394963	99408829	-	ENST00000350498.7@PDAP1	ENST00000350498.7	protein_coding	99408536,99404862,99403398,99400303,99397862,99394963	99408829,99404953,99403505,99400424,99398013,99396740	Gene ID= ENSG00000106244.12 TPM= 101.36 Transcript Type= protein_coding
chr7	99403511	99408548	99403511	99408548	-	ENST00000626285.1@PDAP1	ENST00000626285.1	protein_coding	99408536,99404862,99403511	99408548,99404953,99403525	Gene ID= ENSG00000106244.12 TPM= 1.93 Transcript Type= protein_coding
chr7	99408641	99419616	99408641	99419616	+	ENST00000403633.6@BUD31	ENST00000403633.6	protein_coding	99408641,99410034,99411064,99416138,99417429,99419391	99409004,99410169,99411186,99416260,99417595,99419616	Gene ID= ENSG00000106245.10 TPM= 43.92 Transcript Type= protein_coding
chr7	99408978	99419608	99408978	99419608	+	ENST00000222969.9@BUD31	ENST00000222969.9	protein_coding	99408978,99410034,99411064,99416138,99417429,99419391	99409245,99410169,99411186,99416260,99417595,99419608	Gene ID= ENSG00000106245.10 TPM= 15.93 Transcript Type= protein_coding
chr7	99416739	99438916	99416739	99438916	-	ENST00000292478.8@PTCD1	ENST00000292478.8	protein_coding	99438692,99434790,99433278,99429588,99429103,99424795,99423775,99416739	99438916,99435268,99433418,99429806,99429204,99425616,99423957,99420149	Gene ID= ENSG00000106246.17 TPM= 30.89 Transcript Type= protein_coding
chr7	99438912	99457369	99438912	99457369	+	transcript3085.chr7.nnic@CPSF4	transcript3085.chr7.nnic	protein_coding	99438912,99444789,99448121,99450276,99450702,99452368,99453966,99455919,99456432	99439185,99444839,99448273,99450371,99450795,99452440,99454136,99456005,99457369	Gene ID= ENSG00000160917.14 TPM= 5.31 Transcript Type= NA
chr7	99438912	99457371	99438912	99457371	+	transcript3102.chr7.nic@CPSF4	transcript3102.chr7.nic	protein_coding	99438912,99444789,99448121,99450276,99450702,99452368,99456432	99439185,99444839,99448273,99450371,99450795,99454136,99457371	Gene ID= ENSG00000160917.14 TPM= 3.86 Transcript Type= NA
chr7	99438922	99457342	99438922	99457342	+	ENST00000436336.6@CPSF4	ENST00000436336.6	protein_coding	99438922,99444789,99448121,99450276,99450702,99452368,99454041,99456432	99439185,99444839,99448273,99450371,99450795,99452440,99454136,99457342	Gene ID= ENSG00000160917.14 TPM= 35.72 Transcript Type= protein_coding
chr7	99439073	99457371	99439073	99457371	+	ENST00000292476.9@CPSF4	ENST00000292476.9	protein_coding	99439073,99444789,99448121,99450276,99450702,99452368,99453966,99456432	99439185,99444839,99448273,99450371,99450795,99452440,99454136,99457371	Gene ID= ENSG00000160917.14 TPM= 14 Transcript Type= protein_coding
chr7	99458195	99466331	99458195	99466331	-	ENST00000292475.7@ATP5J2	ENST00000292475.7	protein_coding	99466111,99460086,99459147,99458195	99466331,99460193,99459263,99458355	Gene ID= ENSG00000241468.7 TPM= 19.31 Transcript Type= protein_coding
chr7	99458197	99466167	99458197	99466167	-	ENST00000488775.5@ATP5J2	ENST00000488775.5	protein_coding	99466129,99460086,99458197	99466167,99460193,99458355	Gene ID= ENSG00000241468.7 TPM= 19.31 Transcript Type= protein_coding
chr7	99458195	99466164	99458195	99466164	-	ENST00000359832.8@ATP5J2	ENST00000359832.8	protein_coding	99466111,99460086,99458195	99466164,99460193,99458355	Gene ID= ENSG00000241468.7 TPM= 10.62 Transcript Type= protein_coding
chr7	99493240	99500297	99493240	99500297	-	ENST00000337673.6@ZNF394	ENST00000337673.6	protein_coding	99499638,99498716,99493240	99500297,99498842,99494631	Gene ID= ENSG00000160908.14 TPM= 43.44 Transcript Type= protein_coding
chr7	99505260	99533458	99505260	99533458	+	transcript3124.chr7.nic@ZKSCAN5	transcript3124.chr7.nic	protein_coding	99505260,99512453,99519827,99520169,99525813,99531108	99506458,99512591,99519909,99520304,99526418,99533458	Gene ID= ENSG00000196652.11 TPM= 3.86 Transcript Type= NA
chr7	99546308	99552134	99546308	99552134	-	ENST00000449309.1@FAM200A	ENST00000449309.1	protein_coding	99551854,99546308	99552134,99548506	Gene ID= ENSG00000221909.2 TPM= 8.69 Transcript Type= protein_coding
chr7	99557749	99559133	99557749	99559133	-	transcript3149.chr7.nnic@NA	transcript3149.chr7.nnic	NA	99557749	99559133	Gene ID= novel_gene_chr7_3150 TPM= 2.9 Transcript Type= NA
chr7	99558825	99576449	99558825	99576449	+	ENST00000424881.5@ZNF655	ENST00000424881.5	protein_coding	99558825,99560533,99571688,99572245	99559017,99560695,99571792,99576449	Gene ID= ENSG00000197343.10 TPM= 6.76 Transcript Type= protein_coding
chr7	99558826	99564705	99558826	99564705	+	ENST00000440391.5@ZNF655	ENST00000440391.5	protein_coding	99558826,99560533,99563863	99559017,99560695,99564705	Gene ID= ENSG00000197343.10 TPM= 7.72 Transcript Type= protein_coding
chr7	99559787	99564021	99559787	99564021	-	transcript3151.chr7.nnic@NA	transcript3151.chr7.nnic	NA	99559787	99564021	Gene ID= novel_gene_chr7_3152 TPM= 8.69 Transcript Type= NA
chr7	99562680	99564703	99562680	99564703	+	transcript3147.chr7.nnic@NA	transcript3147.chr7.nnic	NA	99562680	99564703	Gene ID= novel_gene_chr7_3148 TPM= 1.93 Transcript Type= NA
chr7	99648194	99679996	99648194	99679996	-	ENST00000222982.8@CYP3A5	ENST00000222982.8	protein_coding	99679826,99676115,99674533,99672580,99666952,99666601,99665166,99663968,99662816,99660499,99652553,99650073,99648194	99679996,99676208,99674585,99672679,99667065,99666689,99665314,99664095,99662882,99660659,99652779,99650232,99648400	Gene ID= ENSG00000106258.13 TPM= 1.93 Transcript Type= protein_coding
chr7	99890900	99919583	99890900	99919583	-	transcript3167.chr7.nnic@TRIM4	transcript3167.chr7.nnic	protein_coding	99919009,99917772,99909565,99908582,99903576,99903218,99890900	99919583,99917885,99909660,99908812,99903598,99903315,99892746	Gene ID= ENSG00000146833.15 TPM= 9.65 Transcript Type= NA
chr7	99900522	99919503	99900522	99919503	-	transcript3169.chr7.nnic@TRIM4	transcript3169.chr7.nnic	protein_coding	99919009,99917772,99909565,99908582,99903576,99903218,99900522	99919503,99917885,99909660,99908812,99903598,99903315,99902174	Gene ID= ENSG00000146833.15 TPM= 1.93 Transcript Type= NA
chr7	99890413	99919600	99890413	99919600	-	ENST00000349062.6@TRIM4	ENST00000349062.6	protein_coding	99919009,99909565,99908582,99903576,99903218,99890413	99919600,99909660,99908812,99903598,99903315,99892746	Gene ID= ENSG00000146833.15 TPM= 4.83 Transcript Type= protein_coding
chr7	100015581	100041689	100015581	100041689	+	ENST00000324306.10@ZKSCAN1	ENST00000324306.10	protein_coding	100015581,100023419,100024154,100029861,100030249,100033305	100015726,100023932,100024307,100029952,100030375,100041689	Gene ID= ENSG00000106261.16 TPM= 3.86 Transcript Type= protein_coding
chr7	100048083	100049317	100048083	100049317	+	transcript3180.chr7.nnic@NA	transcript3180.chr7.nnic	NA	100048083	100049317	Gene ID= novel_gene_chr7_3181 TPM= 1.93 Transcript Type= NA
chr7	100049772	100065037	100049772	100065037	+	transcript3193.chr7.nic@ZSCAN21	transcript3193.chr7.nic	protein_coding	100049772,100051478,100056911,100057698,100063788	100049841,100051610,100057405,100057890,100065037	Gene ID= ENSG00000166529.14 TPM= 24.62 Transcript Type= NA
chr7	100049772	100065037	100049772	100065037	+	transcript3194.chr7.nic@ZSCAN21	transcript3194.chr7.nic	protein_coding	100049772,100051478,100056911,100057698,100064083	100049841,100051610,100057405,100057890,100065037	Gene ID= ENSG00000166529.14 TPM= 3.86 Transcript Type= NA
chr7	100049774	100065038	100049774	100065038	+	ENST00000456748.6@ZSCAN21	ENST00000456748.6	protein_coding	100049774,100056911,100057698,100063788,100064083	100049841,100057405,100057890,100063979,100065038	Gene ID= ENSG00000166529.14 TPM= 1.93 Transcript Type= protein_coding
chr7	100049774	100065036	100049774	100065036	+	ENST00000292450.8@ZSCAN21	ENST00000292450.8	protein_coding	100049774,100056911,100057698,100063788	100049841,100057405,100057890,100065036	Gene ID= ENSG00000166529.14 TPM= 14 Transcript Type= protein_coding
chr7	100070177	100081754	100070177	100081754	-	transcript3190.chr7.nic@ZNF3	transcript3190.chr7.nic	protein_coding	100081635,100079536,100077229,100075542,100075135,100070177	100081754,100079656,100077433,100075630,100075261,100072212	Gene ID= ENSG00000166526.16 TPM= 5.07 Transcript Type= NA
chr7	100069972	100081764	100069972	100081764	-	ENST00000424697.5@ZNF3	ENST00000424697.5	protein_coding	100081635,100077303,100075542,100075135,100069972	100081764,100077433,100075630,100075261,100072212	Gene ID= ENSG00000166526.16 TPM= 2.01 Transcript Type= protein_coding
chr7	100069979	100081754	100069979	100081754	-	transcript3198.chr7.nic@ZNF3	transcript3198.chr7.nic	protein_coding	100081635,100079536,100077303,100075135,100069979	100081754,100079656,100077433,100075630,100072212	Gene ID= ENSG00000166526.16 TPM= 3.94 Transcript Type= NA
chr7	100064033	100081727	100064033	100081727	-	ENST00000413658.6@ZNF3	ENST00000413658.6	protein_coding	100081635,100079536,100077303,100075542,100075135,100064033	100081727,100079656,100077433,100075630,100075261,100064912	Gene ID= ENSG00000166526.16 TPM= 1.93 Transcript Type= protein_coding
chr7	100069988	100081740	100069988	100081740	-	ENST00000299667.8@ZNF3	ENST00000299667.8	protein_coding	100081635,100079536,100077303,100075542,100075135,100069988	100081740,100079656,100077433,100075630,100075261,100072212	Gene ID= ENSG00000166526.16 TPM= 15.04 Transcript Type= protein_coding
chr7	100088981	100091905	100088981	100091905	+	ENST00000418625.5@COPS6	ENST00000418625.5	protein_coding	100088981,100089293,100089615,100090399,100090592,100090902,100091038,100091238,100091420,100091649	100089066,100089415,100089746,100090487,100090654,100090949,100091152,100091330,100091520,100091905	Gene ID= ENSG00000168090.9 TPM= 150.59 Transcript Type= protein_coding
chr7	100092781	100100510	100092781	100100510	-	transcript3213.chr7.nic@MCM7	transcript3213.chr7.nic	protein_coding	100100213,100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092781	100100510,100100093,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133	Gene ID= ENSG00000166508.17 TPM= 8.21 Transcript Type= NA
chr7	100092781	100101940	100092781	100101940	-	ENST00000303887.9@MCM7	ENST00000303887.9	protein_coding	100101264,100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092781	100101940,100100093,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133	Gene ID= ENSG00000166508.17 TPM= 44.89 Transcript Type= protein_coding
chr7	100101648	100107140	100101648	100107140	+	transcript3220.chr7.nic@AP4M1	transcript3220.chr7.nic	protein_coding	100101648,100101880,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106403,100106658	100101772,100101968,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106291,100106514,100107140	Gene ID= ENSG00000221838.9 TPM= 4.18 Transcript Type= NA
chr7	100101639	100107140	100101639	100107140	+	transcript3225.chr7.nic@AP4M1	transcript3225.chr7.nic	protein_coding	100101639,100101880,100102675,100102864,100103409,100103612,100104092,100105240,100105445,100105959,100106403,100106658	100101772,100101968,100102781,100102960,100103519,100103692,100104154,100105346,100105539,100106291,100106514,100107140	Gene ID= ENSG00000221838.9 TPM= 3.21 Transcript Type= NA
chr7	100101557	100107179	100101557	100107179	+	ENST00000359593.8@AP4M1	ENST00000359593.8	protein_coding	100101557,100101880,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106241,100106403,100106658	100101772,100101968,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106003,100106291,100106514,100107179	Gene ID= ENSG00000221838.9 TPM= 9.97 Transcript Type= protein_coding
chr7	100107070	100119360	100107070	100119360	-	transcript3208.chr7.nic@TAF6	transcript3208.chr7.nic	protein_coding	100119204,100118518,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107070	100119360,100118649,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 9.33 Transcript Type= NA
chr7	100107070	100119398	100107070	100119398	-	ENST00000453269.6@TAF6	ENST00000453269.6	protein_coding	100119204,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107070	100119398,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 20.92 Transcript Type= protein_coding
chr7	100107079	100119346	100107079	100119346	-	ENST00000344095.8@TAF6	ENST00000344095.8	protein_coding	100118880,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107079	100119346,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 6.27 Transcript Type= protein_coding
chr7	100107078	100119364	100107078	100119364	-	ENST00000452041.5@TAF6	ENST00000452041.5	protein_coding	100119329,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107078	100119364,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 7.89 Transcript Type= protein_coding
chr7	100126694	100128498	100126694	100128498	+	ENST00000398075.3@MBLAC1	ENST00000398075.3	protein_coding	100126694,100127368	100127064,100128498	Gene ID= ENSG00000214309.4 TPM= 1.93 Transcript Type= protein_coding
chr7	100148907	100154203	100148907	100154203	+	ENST00000341942.9@LAMTOR4	ENST00000341942.9	protein_coding	100148907,100149499,100153400,100153867	100148975,100149579,100153517,100154203	Gene ID= ENSG00000188186.10 TPM= 46.58 Transcript Type= protein_coding
chr7	100148934	100154203	100148934	100154203	+	ENST00000474831.5@LAMTOR4	ENST00000474831.5	protein_coding	100148934,100149499,100153400,100153867	100148975,100149565,100153517,100154203	Gene ID= ENSG00000188186.10 TPM= 2.17 Transcript Type= processed_transcript
chr7	100148913	100154203	100148913	100154203	+	ENST00000460732.5@LAMTOR4	ENST00000460732.5	protein_coding	100148913,100149499,100153400,100153850	100148975,100149579,100153517,100154203	Gene ID= ENSG00000188186.10 TPM= 2.17 Transcript Type= protein_coding
chr7	100148978	100154212	100148978	100154212	+	ENST00000468582.5@LAMTOR4	ENST00000468582.5	protein_coding	100148978,100149499,100153400,100153867	100149053,100149579,100153517,100154212	Gene ID= ENSG00000188186.10 TPM= 7 Transcript Type= protein_coding
chr7	100154424	100158723	100154424	100158723	-	transcript3249.chr7.nic@C7orf43	transcript3249.chr7.nic	protein_coding	100158089,100157843,100157633,100157373,100157094,100156845,100156634,100156386,100155671,100155262,100154424	100158723,100157938,100157762,100157459,100157214,100156992,100156716,100156549,100155919,100155455,100155164	Gene ID= ENSG00000146826.16 TPM= 2.25 Transcript Type= NA
chr7	100154420	100158020	100154420	100158020	-	ENST00000457641.5@C7orf43	ENST00000457641.5	protein_coding	100157843,100157633,100157373,100157094,100156845,100156634,100156386,100155671,100155262,100154420	100158020,100157762,100157459,100157214,100156992,100156716,100156549,100155825,100155455,100155164	Gene ID= ENSG00000146826.16 TPM= 2.25 Transcript Type= protein_coding
chr7	100154420	100158685	100154420	100158685	-	ENST00000316937.7@C7orf43	ENST00000316937.7	protein_coding	100158089,100157843,100157633,100157373,100157094,100156845,100156634,100156386,100155671,100155262,100154420	100158685,100157938,100157762,100157459,100157214,100156992,100156716,100156549,100155825,100155455,100155164	Gene ID= ENSG00000146826.16 TPM= 4.18 Transcript Type= protein_coding
chr7	100200661	100272241	100200661	100272241	-	transcript3284.chr7.nnic@GATS	transcript3284.chr7.nnic	protein_coding	100271838,100233604,100223882,100223570,100222597,100213047,100200661	100272241,100233674,100224075,100223698,100222720,100213133,100202603	Gene ID= ENSG00000239521.7 TPM= 14.48 Transcript Type= NA
chr7	100219122	100272349	100219122	100272349	-	transcript3309.chr7.nic@GATS	transcript3309.chr7.nic	protein_coding	100271838,100233604,100223882,100223570,100219122	100272349,100233674,100224075,100223698,100222720	Gene ID= ENSG00000239521.7 TPM= 8.69 Transcript Type= NA
chr7	100200653	100272208	100200653	100272208	-	ENST00000543273.5@GATS	ENST00000543273.5	protein_coding	100271838,100233604,100223882,100223570,100222597,100200653	100272208,100233674,100224075,100223698,100222720,100202603	Gene ID= ENSG00000239521.7 TPM= 61.78 Transcript Type= nonsense_mediated_decay
chr7	100200653	100272206	100200653	100272206	-	ENST00000328453.9@GATS	ENST00000328453.9	protein_coding	100271838,100233604,100223882,100223570,100222597,100213047,100211394,100200653	100272206,100233674,100224075,100223698,100222720,100213133,100211994,100202603	Gene ID= ENSG00000239521.7 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr7	100200653	100272218	100200653	100272218	-	ENST00000436886.6@GATS	ENST00000436886.6	protein_coding	100271838,100233604,100223882,100223570,100200653	100272218,100233674,100224075,100223698,100202603	Gene ID= ENSG00000239521.7 TPM= 1.93 Transcript Type= protein_coding
chr7	100212022	100272214	100212022	100272214	-	ENST00000414739.3@GATS	ENST00000414739.3	protein_coding	100271838,100233604,100223882,100223570,100222597,100212022	100272214,100233674,100224075,100223698,100222720,100213133	Gene ID= ENSG00000239521.7 TPM= 6.11 Transcript Type= nonsense_mediated_decay
chr7	100214130	100216782	100214130	100216782	+	transcript3321.chr7.nnic@NA	transcript3321.chr7.nnic	NA	100214130	100216782	Gene ID= novel_gene_chr7_3322 TPM= 1.93 Transcript Type= NA
chr7	100320913	100336368	100320913	100336368	-	transcript3293.chr7.nnic@PMS2P1	transcript3293.chr7.nnic	unprocessed_pseudogene	100335838,100332442,100330463,100330182,100328836,100325691,100320913	100336368,100332581,100330549,100330284,100329019,100325779,100321084	Gene ID= ENSG00000078319.9 TPM= 2.9 Transcript Type= NA
chr7	100325660	100335966	100325660	100335966	-	transcript3305.chr7.nnic@PMS2P1	transcript3305.chr7.nnic	unprocessed_pseudogene	100335838,100332442,100330463,100330182,100328836,100325660	100335966,100332581,100330549,100330284,100329019,100325779	Gene ID= ENSG00000078319.9 TPM= 1.93 Transcript Type= NA
chr7	100336078	100367733	100336078	100367733	+	transcript3272.chr7.nic@STAG3L5P-PVRIG2P-PILRB	transcript3272.chr7.nic	processed_transcript	100336078,100338179,100338773,100345865,100349717,100351252,100352564,100353210,100355143,100356750,100358220,100358690,100359337,100367349	100336337,100338264,100338889,100345968,100349887,100352478,100353123,100353270,100355240,100356938,100358366,100359079,100359537,100367733	Gene ID= ENSG00000272752.6 TPM= 11.58 Transcript Type= NA
chr7	100336125	100341328	100336125	100341328	+	ENST00000422479.5@STAG3L5P	ENST00000422479.5	transcribed_unprocessed_pseudogene	100336125,100338179,100338773,100340945	100336220,100338264,100338889,100341328	Gene ID= ENSG00000242294.6 TPM= 1.93 Transcript Type= processed_transcript
chr7	100346470	100349096	100346470	100349096	+	transcript3323.chr7.nnic@NA	transcript3323.chr7.nnic	NA	100346470	100349096	Gene ID= novel_gene_chr7_3324 TPM= 1.93 Transcript Type= NA
chr7	100373528	100400096	100373528	100400096	+	ENST00000350573.2@PILRA	ENST00000350573.2	protein_coding	100373528,100374044,100397879,100399291,100399581,100399785	100373720,100374433,100397912,100399340,100399612,100400096	Gene ID= ENSG00000085514.15 TPM= 1.93 Transcript Type= protein_coding
chr7	100400853	100428670	100400853	100428670	-	transcript3327.chr7.nnic@ZCWPW1	transcript3327.chr7.nnic	protein_coding	100428568,100425030,100415975,100409428,100408539,100407228,100406694,100405013,100404178,100403694,100402516,100401889,100400853	100428670,100425136,100416097,100409544,100408659,100407303,100406798,100405093,100404244,100403785,100402576,100402041,100401336	Gene ID= ENSG00000078487.17 TPM= 1.93 Transcript Type= NA
chr7	100429631	100434126	100429631	100434126	+	ENST00000310512.3@MEPCE	ENST00000310512.3	protein_coding	100429631,100432919,100433263,100433502	100431689,100433137,100433389,100434126	Gene ID= ENSG00000146834.13 TPM= 46.33 Transcript Type= protein_coding
chr7	100435286	100436478	100435286	100436478	-	transcript3339.chr7.nic@PPP1R35	transcript3339.chr7.nic	protein_coding	100436141,100435286	100436478,100436064	Gene ID= ENSG00000160813.6 TPM= 5.31 Transcript Type= NA
chr7	100435282	100436423	100435282	100436423	-	ENST00000487452.1@PPP1R35	ENST00000487452.1	protein_coding	100435848,100435631,100435282	100436423,100435767,100435533	Gene ID= ENSG00000160813.6 TPM= 2.41 Transcript Type= retained_intron
chr7	100466519	100479279	100466519	100479279	-	ENST00000300181.6@TSC22D4	ENST00000300181.6	protein_coding	100478794,100477277,100474274,100467552,100466519	100479279,100478307,100474440,100467600,100467168	Gene ID= ENSG00000166925.8 TPM= 14.48 Transcript Type= protein_coding
chr7	100539194	100565961	100539194	100565961	+	transcript3345.chr7.nic@AGFG2	transcript3345.chr7.nic	protein_coding	100539194,100548822,100550396,100553347,100554093,100555610,100556594,100562259,100562594,100562863,100563834,100564218,100564932	100539567,100548915,100550511,100553500,100554258,100555735,100556626,100562379,100562682,100562946,100563962,100564303,100565961	Gene ID= ENSG00000106351.12 TPM= 3.86 Transcript Type= NA
chr7	100574011	100586156	100574011	100586156	-	transcript3347.chr7.nic@LRCH4	transcript3347.chr7.nic	protein_coding	100585881,100582315,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576902,100576694,100576238,100575871,100575705,100574011	100586156,100582459,100582167,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576777,100576323,100576008,100575782,100574356	Gene ID= ENSG00000077454.15 TPM= 7.72 Transcript Type= NA
chr7	100574660	100586153	100574660	100586153	-	ENST00000310300.10@LRCH4	ENST00000310300.10	protein_coding	100585881,100582315,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576902,100576694,100576238,100575871,100575705,100574660	100586153,100582459,100582167,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576777,100576323,100576008,100575782,100575304	Gene ID= ENSG00000077454.15 TPM= 24.13 Transcript Type= protein_coding
chr7	100602177	100608175	100602177	100608175	+	ENST00000223061.5@PCOLCE	ENST00000223061.5	protein_coding	100602177,100603430,100603959,100605091,100605676,100606416,100607452,100607637,100607937	100602551,100603538,100604217,100605215,100605812,100606630,100607523,100607807,100608175	Gene ID= ENSG00000106333.12 TPM= 12.55 Transcript Type= protein_coding
chr7	100612510	100615384	100612510	100615384	+	ENST00000393950.6@MOSPD3	ENST00000393950.6	protein_coding	100612510,100613194,100613477,100614867,100615152	100612996,100613269,100613706,100615031,100615384	Gene ID= ENSG00000106330.11 TPM= 10.62 Transcript Type= protein_coding
chr7	100673531	100679174	100673531	100679174	+	ENST00000303210.8@GNB2	ENST00000303210.8	protein_coding	100673531,100676177,100676535,100676693,100677352,100677498,100677752,100678098,100678398,100678695	100673923,100676322,100676573,100676799,100677415,100677660,100677818,100678299,100678614,100679174	Gene ID= ENSG00000172354.9 TPM= 187.11 Transcript Type= protein_coding
chr7	100676138	100679174	100676138	100679174	+	ENST00000393924.1@GNB2	ENST00000393924.1	protein_coding	100676138,100676535,100676693,100677352,100677498,100677752,100678098,100678398,100678695	100676322,100676573,100676799,100677415,100677660,100677818,100678299,100678614,100679174	Gene ID= ENSG00000172354.9 TPM= 9.49 Transcript Type= protein_coding
chr7	100689466	100690800	100689466	100690800	+	transcript3379.chr7.nnic@NA	transcript3379.chr7.nnic	NA	100689466	100690800	Gene ID= novel_gene_chr7_3380 TPM= 3.86 Transcript Type= NA
chr7	100691508	100694472	100691508	100694472	-	transcript3381.chr7.nnic@NA	transcript3381.chr7.nnic	NA	100691508	100694472	Gene ID= novel_gene_chr7_3382 TPM= 2.9 Transcript Type= NA
chr7	100706053	100707495	100706053	100707495	+	ENST00000303151.4@POP7	ENST00000303151.4	protein_coding	100706053,100706821	100706304,100707495	Gene ID= ENSG00000172336.4 TPM= 55.02 Transcript Type= protein_coding
chr7	100802565	100827499	100802565	100827499	-	ENST00000358173.7@EPHB4	ENST00000358173.7	protein_coding	100826979,100824203,100823644,100822271,100820141,100819557,100818520,100817192,100813919,100813652,100813095,100812747,100807365,100806420,100805501,100805166,100802565	100827499,100824273,100823931,100822667,100820296,100819889,100818644,100817357,100814021,100813716,100813208,100812994,100807580,100806569,100805694,100805321,100803590	Gene ID= ENSG00000196411.9 TPM= 18.34 Transcript Type= protein_coding
chr7	100852753	100867008	100852753	100867008	+	ENST00000354161.7@SLC12A9	ENST00000354161.7	protein_coding	100852753,100854156,100854620,100855706,100856868,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719	100852835,100854378,100854754,100855837,100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867008	Gene ID= ENSG00000146828.17 TPM= 5.79 Transcript Type= protein_coding
chr7	100866172	100873454	100866172	100873454	+	transcript3404.chr7.nnic@TRIP6	transcript3404.chr7.nnic	protein_coding	100866172,100867363,100867861,100868108,100868495,100870370,100870574,100871543,100872624,100873172	100866251,100867606,100867988,100868233,100868866,100870463,100870743,100871721,100872744,100873454	Gene ID= ENSG00000087077.13 TPM= 8.69 Transcript Type= NA
chr7	100875126	100888664	100875126	100888664	+	ENST00000618262.4@SRRT	ENST00000618262.4	protein_coding	100875126,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885213,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888054,100888257,100888474	100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664	Gene ID= ENSG00000087087.19 TPM= 27.35 Transcript Type= protein_coding
chr7	100875126	100888664	100875126	100888664	+	ENST00000614484.4@SRRT	ENST00000614484.4	protein_coding	100875126,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885216,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888042,100888257,100888474	100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664	Gene ID= ENSG00000087087.19 TPM= 64.03 Transcript Type= protein_coding
chr7	100875185	100888664	100875185	100888664	+	ENST00000618411.4@SRRT	ENST00000618411.4	protein_coding	100875185,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885216,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888054,100888257,100888474	100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664	Gene ID= ENSG00000087087.19 TPM= 6.11 Transcript Type= protein_coding
chr7	100875188	100888664	100875188	100888664	+	ENST00000611405.4@SRRT	ENST00000611405.4	protein_coding	100875188,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885213,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888042,100888257,100888474	100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664	Gene ID= ENSG00000087087.19 TPM= 18.66 Transcript Type= protein_coding
chr7	100886661	100889712	100886661	100889712	-	transcript3408.chr7.nnic@NA	transcript3408.chr7.nnic	NA	100886661	100889712	Gene ID= novel_gene_chr7_3409 TPM= 4.83 Transcript Type= NA
chr7	100888723	100889718	100888723	100889718	-	ENST00000388761.3@UFSP1	ENST00000388761.3	protein_coding	100888723	100889718	Gene ID= ENSG00000176125.4 TPM= 3.86 Transcript Type= protein_coding
chr7	100891784	100895936	100891784	100895936	-	transcript3418.chr7.nic@ACHE	transcript3418.chr7.nic	protein_coding	100895802,100891784	100895936,100894252	Gene ID= ENSG00000087085.13 TPM= 5.07 Transcript Type= NA
chr7	100889994	100895888	100889994	100895888	-	ENST00000241069.9@ACHE	ENST00000241069.9	protein_coding	100895802,100893165,100892334,100891169,100889994	100895888,100894252,100892818,100891338,100890335	Gene ID= ENSG00000087085.13 TPM= 38.69 Transcript Type= protein_coding
chr7	100889994	100896132	100889994	100896132	-	ENST00000428317.5@ACHE	ENST00000428317.5	protein_coding	100896059,100893165,100892334,100891169,100889994	100896132,100894252,100892818,100891338,100890335	Gene ID= ENSG00000087085.13 TPM= 14.56 Transcript Type= protein_coding
chr7	100890716	100895861	100890716	100895861	-	ENST00000411582.1@ACHE	ENST00000411582.1	protein_coding	100895802,100893165,100892334,100891169,100890716	100895861,100894255,100892818,100891338,100891088	Gene ID= ENSG00000087085.13 TPM= 7.32 Transcript Type= protein_coding
chr7	101085439	101097967	101085439	101097967	+	ENST00000306085.10@TRIM56	ENST00000306085.10	protein_coding	101085439,101087006,101087312	101085571,101087168,101097967	Gene ID= ENSG00000169871.12 TPM= 16.41 Transcript Type= protein_coding
chr7	101085475	101090629	101085475	101090629	+	transcript3424.chr7.nnic@TRIM56	transcript3424.chr7.nnic	protein_coding	101085475,101087312	101085571,101090629	Gene ID= ENSG00000169871.12 TPM= 9.65 Transcript Type= NA
chr7	101094624	101097898	101094624	101097898	+	transcript3427.chr7.nnic@NA	transcript3427.chr7.nnic	NA	101094624	101097898	Gene ID= novel_gene_chr7_3428 TPM= 1.93 Transcript Type= NA
chr7	101127089	101139266	101127089	101139266	+	ENST00000223095.4@SERPINE1	ENST00000223095.4	protein_coding	101127089,101128393,101130421,101131875,101133695,101135494,101135715,101137001,101137405	101127244,101128664,101130654,101132069,101133893,101135594,101135801,101137084,101139266	Gene ID= ENSG00000106366.8 TPM= 5.79 Transcript Type= protein_coding
chr7	101154397	101161277	101154397	101161277	+	ENST00000337619.9@AP1S1	ENST00000337619.9	protein_coding	101154397,101156594,101157377,101159059,101160519	101154517,101156772,101157485,101159196,101161277	Gene ID= ENSG00000106367.13 TPM= 3.86 Transcript Type= protein_coding
chr7	101205977	101217673	101205977	101217673	-	ENST00000223127.7@PLOD3	ENST00000223127.7	protein_coding	101217166,101216695,101216410,101216163,101215908,101215089,101213107,101212842,101212530,101212253,101211846,101211591,101210532,101210331,101210093,101208853,101207578,101206779,101205977	101217673,101216786,101216546,101216326,101216020,101215152,101213204,101212943,101212655,101212374,101211950,101211716,101210673,101210444,101210161,101208957,101207724,101206904,101206436	Gene ID= ENSG00000106397.11 TPM= 20.27 Transcript Type= protein_coding
chr7	101217668	101224190	101217668	101224190	+	ENST00000305105.2@ZNHIT1	ENST00000305105.2	protein_coding	101217668,101222604,101223477,101223673,101223937	101218217,101222774,101223556,101223842,101224190	Gene ID= ENSG00000106400.11 TPM= 70.47 Transcript Type= protein_coding
chr7	101239612	101245085	101239612	101245085	-	ENST00000223136.4@FIS1	ENST00000223136.4	protein_coding	101244960,101244007,101240830,101240142,101239612	101245085,101244139,101240906,101240247,101239903	Gene ID= ENSG00000214253.8 TPM= 181.96 Transcript Type= protein_coding
chr7	101239607	101245048	101239607	101245048	-	ENST00000442303.1@FIS1	ENST00000442303.1	protein_coding	101244898,101240830,101240142,101239607	101245048,101240906,101240247,101239903	Gene ID= ENSG00000214253.8 TPM= 5.31 Transcript Type= protein_coding
chr7	101313367	101321823	101313367	101321823	-	ENST00000621899.4@IFT22	ENST00000621899.4	protein_coding	101321671,101316340,101313367	101321823,101316542,101315282	Gene ID= ENSG00000128581.15 TPM= 3.86 Transcript Type= protein_coding
chr7	101314795	101321777	101314795	101321777	-	ENST00000437644.2@IFT22	ENST00000437644.2	protein_coding	101321671,101318956,101316340,101314795	101321777,101319032,101316542,101315282	Gene ID= ENSG00000128581.15 TPM= 5.79 Transcript Type= protein_coding
chr7	101314753	101321764	101314753	101321764	-	ENST00000498704.6@IFT22	ENST00000498704.6	protein_coding	101321671,101318124,101316340,101314753	101321764,101318213,101316542,101315282	Gene ID= ENSG00000128581.15 TPM= 5.79 Transcript Type= protein_coding
chr7	101815945	102178657	101815945	102178657	+	transcript3457.chr7.nic@CUX1	transcript3457.chr7.nic	protein_coding	101815945,101916115,102028098,102070339,102097364,102104336,102111698,102115207,102158560,102170446,102178469	101816093,101916225,102028145,102070417,102097501,102104459,102111774,102115273,102158608,102170550,102178657	Gene ID= ENSG00000257923.9 TPM= 1.93 Transcript Type= NA
chr7	102165352	102166934	102165352	102166934	-	transcript3466.chr7.nnic@NA	transcript3466.chr7.nnic	NA	102165352	102166934	Gene ID= novel_gene_chr7_3467 TPM= 2.9 Transcript Type= NA
chr7	102248510	102249702	102248510	102249702	+	transcript3462.chr7.nnic@NA	transcript3462.chr7.nnic	NA	102248510	102249702	Gene ID= novel_gene_chr7_3463 TPM= 5.79 Transcript Type= NA
chr7	102363862	102426666	102363862	102426666	+	transcript3476.chr7.nic@PRKRIP1	transcript3476.chr7.nic	protein_coding	102363862,102365974,102375823,102376212,102399548,102404598,102407434,102425014	102364411,102366076,102375949,102376322,102399648,102404683,102407498,102426666	Gene ID= ENSG00000128563.13 TPM= 14 Transcript Type= NA
chr7	102363891	102426666	102363891	102426666	+	transcript3478.chr7.nic@PRKRIP1	transcript3478.chr7.nic	protein_coding	102363891,102375823,102376212,102397620,102399548,102404598,102407434,102425014	102364411,102375949,102376322,102397698,102399648,102404683,102407498,102426666	Gene ID= ENSG00000128563.13 TPM= 4.34 Transcript Type= NA
chr7	102363897	102426676	102363897	102426676	+	ENST00000496391.5@PRKRIP1	ENST00000496391.5	protein_coding	102363897,102365955,102375823,102376212,102395977,102397620,102399548,102404598,102407434,102425014	102364411,102366076,102375949,102376322,102396537,102397698,102399648,102404683,102407498,102426676	Gene ID= ENSG00000128563.13 TPM= 11.58 Transcript Type= protein_coding
chr7	102363862	102397404	102363862	102397404	+	transcript3486.chr7.nic@PRKRIP1	transcript3486.chr7.nic	protein_coding	102363862,102365974,102375823,102376212,102395977	102364411,102366076,102375949,102376322,102397404	Gene ID= ENSG00000128563.13 TPM= 2.9 Transcript Type= NA
chr7	102396363	102426666	102396363	102426666	+	ENST00000397912.3@PRKRIP1	ENST00000397912.3	protein_coding	102396363,102397620,102399548,102404598,102407434,102425014	102396537,102397698,102399648,102404683,102407498,102426666	Gene ID= ENSG00000128563.13 TPM= 14 Transcript Type= protein_coding
chr7	102363881	102380633	102363881	102380633	+	transcript3489.chr7.nic@AC091390.4	transcript3489.chr7.nic	transcribed_unprocessed_pseudogene	102363881,102365955,102375823,102376212,102380485	102364411,102366076,102375949,102376322,102380633	Gene ID= ENSG00000239969.5 TPM= 2.9 Transcript Type= NA
chr7	102433530	102456821	102433530	102456821	+	ENST00000356387.6@ORAI2	ENST00000356387.6	protein_coding	102433530,102436202,102438944,102446513	102433661,102436333,102439181,102456821	Gene ID= ENSG00000160991.15 TPM= 1.93 Transcript Type= protein_coding
chr7	102452823	102464866	102452823	102464866	-	transcript3553.chr7.nnic@ALKBH4	transcript3553.chr7.nnic	protein_coding	102464714,102459604,102456850,102452823	102464866,102459801,102457981,102452830	Gene ID= ENSG00000160993.3 TPM= 2.9 Transcript Type= NA
chr7	102456238	102464876	102456238	102464876	-	ENST00000292566.3@ALKBH4	ENST00000292566.3	protein_coding	102464714,102459604,102456238	102464876,102459801,102457981	Gene ID= ENSG00000160993.3 TPM= 2.9 Transcript Type= protein_coding
chr7	102464929	102473168	102464929	102473168	+	ENST00000292616.9@LRWD1	ENST00000292616.9	protein_coding	102464929,102465817,102466154,102467339,102467719,102468062,102468263,102468554,102468855,102469574,102469742,102472218,102472454,102472692,102472909	102465160,102466051,102466270,102467479,102467823,102468187,102468377,102468654,102469062,102469646,102469882,102472309,102472609,102472804,102473168	Gene ID= ENSG00000161036.12 TPM= 22.2 Transcript Type= protein_coding
chr7	102473118	102478907	102473118	102478907	-	ENST00000292614.9@POLR2J	ENST00000292614.9	protein_coding	102478808,102476181,102474361,102473118	102478907,102476270,102474535,102473684	Gene ID= ENSG00000005075.15 TPM= 27.99 Transcript Type= protein_coding
chr7	102483144	102517781	102483144	102517781	-	ENST00000465829.5@RASA4B	ENST00000465829.5	protein_coding	102517646,102511925,102510179,102509599,102506695,102503163,102501096,102500699,102496847,102496469,102496140,102495278,102494881,102494538,102493825,102493116,102490986,102488463,102485039,102483825,102483144	102517781,102511981,102510292,102509660,102506824,102503244,102501227,102500793,102496964,102496619,102496204,102495390,102495073,102494675,102493969,102493285,102491123,102488598,102485159,102483889,102483713	Gene ID= ENSG00000170667.14 TPM= 179.95 Transcript Type= protein_coding
chr7	102483144	102503293	102483144	102503293	-	transcript3532.chr7.nic@AC093668.2	transcript3532.chr7.nic	processed_transcript	102503163,102501096,102500699,102496847,102496469,102496140,102495278,102494881,102494538,102493825,102493116,102490986,102488463,102485039,102483825,102483144	102503293,102501227,102500793,102496964,102496619,102496204,102495390,102495073,102494675,102493969,102493285,102491123,102488598,102485159,102483889,102483713	Gene ID= ENSG00000272949.1 TPM= 25.5 Transcript Type= NA
chr7	102537920	102572649	102537920	102572649	-	ENST00000486319.5@POLR2J3	ENST00000486319.5	protein_coding	102572472,102569835,102566997,102541501,102541093,102540015,102539606,102537920	102572649,102569924,102567083,102541662,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 9.97 Transcript Type= nonsense_mediated_decay
chr7	102562656	102572583	102562656	102572583	-	ENST00000511313.5@POLR2J3	ENST00000511313.5	protein_coding	102572472,102569835,102562656	102572583,102569924,102567083	Gene ID= ENSG00000168255.19 TPM= 3.86 Transcript Type= protein_coding
chr7	102537919	102572539	102537919	102572539	-	ENST00000379340.9@POLR2J3	ENST00000379340.9	protein_coding	102572472,102569835,102568010,102566997,102541501,102541093,102540015,102539606,102537919	102572539,102569924,102568184,102567083,102541662,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 1.28 Transcript Type= nonsense_mediated_decay
chr7	102582323	102616765	102582323	102616765	-	transcript3501.chr7.nic@RASA4	transcript3501.chr7.nic	protein_coding	102616625,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102590159,102588234,102587635,102584218,102583004,102582323	102616765,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102590296,102588445,102587770,102584338,102583068,102582892	Gene ID= ENSG00000105808.17 TPM= 15.89 Transcript Type= NA
chr7	102582323	102616765	102582323	102616765	-	transcript3511.chr7.nic@RASA4	transcript3511.chr7.nic	protein_coding	102616625,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594492,102594050,102593707,102592994,102592285,102590159,102587635,102584218,102583004,102582323	102616765,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102590296,102587770,102584338,102583068,102582892	Gene ID= ENSG00000105808.17 TPM= 16.08 Transcript Type= NA
chr7	102579646	102616757	102579646	102616757	-	ENST00000262940.11@RASA4	ENST00000262940.11	protein_coding	102616625,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102590159,102587635,102584218,102583004,102579646	102616757,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102590296,102587770,102584338,102583068,102582892	Gene ID= ENSG00000105808.17 TPM= 27.99 Transcript Type= protein_coding
chr7	102582323	102611591	102582323	102611591	-	ENST00000461209.5@RASA4	ENST00000461209.5	protein_coding	102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102590159,102587635,102584218,102583004,102582323	102611591,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102590296,102587770,102584338,102583068,102582892	Gene ID= ENSG00000105808.17 TPM= 274.11 Transcript Type= protein_coding
chr7	102582325	102616756	102582325	102616756	-	ENST00000449970.6@RASA4	ENST00000449970.6	protein_coding	102616625,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102587635,102584218,102583004,102582325	102616756,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102587770,102584338,102583068,102582892	Gene ID= ENSG00000105808.17 TPM= 14.44 Transcript Type= protein_coding
chr7	102582323	102609780	102582323	102609780	-	transcript3520.chr7.nic@AC105052.1	transcript3520.chr7.nic	protein_coding	102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102590159,102587635,102584218,102583004,102582323	102609780,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102590296,102587770,102584338,102583068,102582892	Gene ID= ENSG00000205236.6 TPM= 17.18 Transcript Type= NA
chr7	102637049	102671641	102637049	102671641	-	ENST00000476151.5@POLR2J2	ENST00000476151.5	protein_coding	102671552,102668915,102667090,102666077,102640612,102640204,102639123,102638714,102637049	102671641,102669004,102667264,102666163,102640773,102640414,102639199,102638834,102637633	Gene ID= ENSG00000267645.5 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr7	102748971	102809225	102748971	102809225	+	ENST00000442873.5@FAM185A	ENST00000442873.5	protein_coding	102748971,102751692,102757854,102761273,102772409,102777253,102787335,102808290	102749636,102751801,102757946,102761411,102772450,102777348,102787469,102809225	Gene ID= ENSG00000222011.8 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr7	102748968	102809224	102748968	102809224	+	transcript3580.chr7.nnic@FAM185A	transcript3580.chr7.nnic	protein_coding	102748968,102751692,102757854,102761273,102777253,102787335,102808290	102749658,102751801,102757946,102761411,102777348,102787469,102809224	Gene ID= ENSG00000222011.8 TPM= 2.9 Transcript Type= NA
chr7	103074911	103099758	103074911	103099758	+	transcript3587.chr7.nic@ARMC10	transcript3587.chr7.nic	protein_coding	103074911,103075777,103083682,103084030,103086630,103092477,103097277,103098299	103075411,103075881,103083830,103084062,103086764,103092653,103097348,103099758	Gene ID= ENSG00000170632.13 TPM= 3.18 Transcript Type= NA
chr7	103075159	103099758	103075159	103099758	+	transcript3591.chr7.nic@ARMC10	transcript3591.chr7.nic	protein_coding	103075159,103083682,103084030,103086630,103092477,103097277,103098299	103075411,103083830,103084062,103086764,103092653,103097348,103099758	Gene ID= ENSG00000170632.13 TPM= 4.14 Transcript Type= NA
chr7	103074911	103098645	103074911	103098645	+	transcript3593.chr7.nic@ARMC10	transcript3593.chr7.nic	protein_coding	103074911,103075777,103083682,103084030,103086630,103097277,103098299	103075411,103075881,103083830,103084062,103086764,103097348,103098645	Gene ID= ENSG00000170632.13 TPM= 1.93 Transcript Type= NA
chr7	103074881	103099764	103074881	103099764	+	ENST00000323716.7@ARMC10	ENST00000323716.7	protein_coding	103074881,103075777,103083682,103086630,103092477,103097277,103098299	103075411,103075881,103083830,103086764,103092653,103097348,103099764	Gene ID= ENSG00000170632.13 TPM= 4.14 Transcript Type= protein_coding
chr7	103074881	103099758	103074881	103099758	+	ENST00000441711.6@ARMC10	ENST00000441711.6	protein_coding	103074881,103083682,103086630,103092477,103097277,103098299	103075411,103083830,103086764,103092653,103097348,103099758	Gene ID= ENSG00000170632.13 TPM= 9.93 Transcript Type= protein_coding
chr7	103074881	103099749	103074881	103099749	+	ENST00000425331.5@ARMC10	ENST00000425331.5	protein_coding	103074881,103083682,103086630,103092477,103098299	103075411,103083830,103086764,103092653,103099749	Gene ID= ENSG00000170632.13 TPM= 1.25 Transcript Type= protein_coding
chr7	103074881	103099758	103074881	103099758	+	ENST00000454559.5@ARMC10	ENST00000454559.5	protein_coding	103074881,103083682,103086630,103097277,103098299	103075411,103083830,103086764,103097348,103099758	Gene ID= ENSG00000170632.13 TPM= 1.25 Transcript Type= protein_coding
chr7	103074881	103099749	103074881	103099749	+	ENST00000541300.5@ARMC10	ENST00000541300.5	protein_coding	103074881,103083682,103086630,103098299	103075411,103083830,103086764,103099749	Gene ID= ENSG00000170632.13 TPM= 1.25 Transcript Type= protein_coding
chr7	103297422	103313235	103297422	103313235	+	ENST00000249269.8@PMPCB	ENST00000249269.8	protein_coding	103297422,103298568,103299443,103300178,103303842,103304411,103307596,103308952,103310315,103311643,103311808,103312056,103312207	103297558,103298708,103299529,103300307,103304040,103304490,103307708,103309095,103310475,103311728,103311896,103312131,103313235	Gene ID= ENSG00000105819.13 TPM= 20.27 Transcript Type= protein_coding
chr7	103297457	103312312	103297457	103312312	+	ENST00000453466.1@PMPCB	ENST00000453466.1	protein_coding	103297457,103298568,103299443,103300187,103303842,103304411,103307596,103308952,103310315,103311643,103311808,103312056,103312207	103297558,103298708,103299533,103300307,103304040,103304490,103307708,103309095,103310475,103311728,103311896,103312131,103312312	Gene ID= ENSG00000105819.13 TPM= 20.27 Transcript Type= nonsense_mediated_decay
chr7	103297435	103312415	103297435	103312415	+	ENST00000428154.5@PMPCB	ENST00000428154.5	protein_coding	103297435,103298568,103299443,103300178,103303842,103304411,103307596,103308952,103310315,103311643,103311808,103312056	103297558,103298708,103299529,103300307,103304040,103304490,103307708,103309095,103310475,103311728,103311896,103312415	Gene ID= ENSG00000105819.13 TPM= 3.86 Transcript Type= protein_coding
chr7	103312519	103344811	103312519	103344811	-	transcript3616.chr7.nic@DNAJC2	transcript3616.chr7.nic	protein_coding	103344559,103341764,103337736,103327656,103327332,103326543,103324482,103323598,103322703,103322511,103321932,103319756,103319609,103316830,103315988,103315764,103312947,103312519	103344811,103341954,103337811,103327754,103327378,103326684,103324562,103323663,103322794,103322632,103322081,103319844,103319678,103317014,103316088,103315871,103313101,103312643	Gene ID= ENSG00000105821.14 TPM= 2.9 Transcript Type= NA
chr7	103312519	103344873	103312519	103344873	-	ENST00000379263.7@DNAJC2	ENST00000379263.7	protein_coding	103344559,103341764,103337736,103327656,103326543,103324482,103323598,103322703,103322511,103321932,103319756,103319609,103316830,103315988,103315764,103312947,103312519	103344873,103341954,103337811,103327754,103326684,103324562,103323663,103322794,103322632,103322081,103319844,103319678,103317014,103316088,103315871,103313101,103312643	Gene ID= ENSG00000105821.14 TPM= 21.24 Transcript Type= protein_coding
chr7	103344914	103369395	103344914	103369395	+	ENST00000435765.5@PSMC2	ENST00000435765.5	protein_coding	103344914,103347524,103353921,103354868,103355694,103361957,103362686,103363344,103364143,103366076,103367413,103367713,103367897	103345136,103347781,103353958,103354949,103355793,103362088,103362758,103363439,103364307,103366163,103367615,103367809,103369395	Gene ID= ENSG00000161057.11 TPM= 136.11 Transcript Type= protein_coding
chr7	104126341	104208047	104126341	104208047	-	ENST00000297431.8@ORC5	ENST00000297431.8	protein_coding	104207833,104204142,104200758,104197725,104195143,104188251,104184123,104183943,104168473,104166772,104165235,104161072,104136781,104126341	104208047,104204234,104200958,104197799,104195254,104188381,104184171,104184033,104168525,104166884,104165282,104161182,104136893,104126893	Gene ID= ENSG00000164815.10 TPM= 14.48 Transcript Type= protein_coding
chr7	104126341	104208013	104126341	104208013	-	transcript3642.chr7.nnic@ORC5	transcript3642.chr7.nnic	protein_coding	104207833,104204142,104200758,104197725,104195143,104188251,104184123,104183943,104168473,104165235,104161072,104136781,104126341	104208013,104204234,104200958,104197799,104195254,104188381,104184171,104184033,104168525,104165282,104161182,104136893,104126893	Gene ID= ENSG00000164815.10 TPM= 4.83 Transcript Type= NA
chr7	104126341	104208013	104126341	104208013	-	transcript3643.chr7.nnic@ORC5	transcript3643.chr7.nnic	protein_coding	104207833,104204142,104200758,104197725,104195143,104188251,104184123,104183943,104168473,104166772,104165235,104136781,104126341	104208013,104204234,104200958,104197799,104195254,104188381,104184171,104184033,104168525,104166884,104165282,104136893,104126893	Gene ID= ENSG00000164815.10 TPM= 1.93 Transcript Type= NA
chr7	104981746	104984160	104981746	104984160	-	transcript3647.chr7.nnic@NA	transcript3647.chr7.nnic	NA	104981746	104984160	Gene ID= novel_gene_chr7_3648 TPM= 1.93 Transcript Type= NA
chr7	105013282	105014108	105013282	105014108	-	transcript3649.chr7.nnic@NA	transcript3649.chr7.nnic	NA	105013282	105014108	Gene ID= novel_gene_chr7_3650 TPM= 59.85 Transcript Type= NA
chr7	105014152	105090132	105014152	105090132	+	transcript3653.chr7.nic@KMT2E	transcript3653.chr7.nic	protein_coding	105014152,105038126,105040839,105062164,105063351,105066727,105073619,105074643,105076043,105076963,105077303,105078846,105081688,105090009	105014535,105038199,105041023,105062278,105063580,105066807,105073677,105074815,105076081,105077193,105077433,105078963,105081797,105090132	Gene ID= ENSG00000005483.20 TPM= 14.48 Transcript Type= NA
chr7	105014164	105091300	105014164	105091300	+	transcript3655.chr7.nic@KMT2E	transcript3655.chr7.nic	protein_coding	105014164,105040839,105062164,105063351,105066727,105073619,105074643,105076043,105076963,105077303,105078846,105081688,105090009,105091216	105014535,105041023,105062278,105063580,105066807,105073677,105074815,105076081,105077193,105077433,105078963,105081797,105090273,105091300	Gene ID= ENSG00000005483.20 TPM= 2.9 Transcript Type= NA
chr7	105143298	105388949	105143298	105388949	-	transcript3669.chr7.nic@SRPK2	transcript3669.chr7.nic	protein_coding	105388791,105388648,105268806,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143298	105388949,105388702,105268869,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330	Gene ID= ENSG00000135250.16 TPM= 4.03 Transcript Type= NA
chr7	105143298	105388949	105143298	105388949	-	transcript3670.chr7.nic@SRPK2	transcript3670.chr7.nic	protein_coding	105388791,105388648,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143298	105388949,105388702,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330	Gene ID= ENSG00000135250.16 TPM= 2.09 Transcript Type= NA
chr7	105143298	105269052	105143298	105269052	-	transcript3672.chr7.nic@SRPK2	transcript3672.chr7.nic	protein_coding	105268806,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143298	105269052,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330	Gene ID= ENSG00000135250.16 TPM= 3.54 Transcript Type= NA
chr7	105305500	105388949	105305500	105388949	-	transcript3676.chr7.nic@SRPK2	transcript3676.chr7.nic	protein_coding	105388791,105388648,105305500	105388949,105388702,105306571	Gene ID= ENSG00000135250.16 TPM= 2.9 Transcript Type= NA
chr7	105113695	105117661	105113695	105117661	-	transcript3678.chr7.nnic@NA	transcript3678.chr7.nnic	NA	105113695	105117661	Gene ID= novel_gene_chr7_3679 TPM= 1.93 Transcript Type= NA
chr7	105456511	105522272	105456511	105522272	-	transcript3686.chr7.nnic@PUS7	transcript3686.chr7.nnic	protein_coding	105522052,105508115,105506189,105505955,105495142,105491540,105482312,105481052,105472132,105470688,105468337,105465313,105462621,105459168,105456511	105522272,105508544,105506273,105506056,105495253,105491617,105482440,105481177,105472193,105470848,105468463,105465414,105462750,105459259,105457926	Gene ID= ENSG00000091127.13 TPM= 1.93 Transcript Type= NA
chr7	105498526	105522272	105498526	105522272	-	transcript3689.chr7.nic@PUS7	transcript3689.chr7.nic	protein_coding	105522052,105508115,105506189,105505955,105498526	105522272,105508544,105506273,105506056,105502564	Gene ID= ENSG00000091127.13 TPM= 1.93 Transcript Type= NA
chr7	105532157	105567676	105532157	105567676	+	transcript3692.chr7.nnic@RINT1	transcript3692.chr7.nnic	protein_coding	105532157,105532824,105536565,105541802,105542408,105546910,105547184,105548554,105550055,105550261,105551570,105555028,105563733,105565277,105565530,105567119	105532357,105532869,105536749,105541855,105542649,105547083,105547333,105548710,105550165,105550486,105551707,105555227,105563947,105565457,105565648,105567676	Gene ID= ENSG00000135249.7 TPM= 3.38 Transcript Type= NA
chr7	105532085	105567677	105532085	105567677	+	ENST00000257700.6@RINT1	ENST00000257700.6	protein_coding	105532085,105532824,105536565,105542408,105546910,105547184,105548554,105550055,105550261,105551570,105555028,105563733,105565277,105565530,105567119	105532357,105532869,105536749,105542649,105547083,105547333,105548710,105550165,105550486,105551707,105555227,105563947,105565457,105565648,105567677	Gene ID= ENSG00000135249.7 TPM= 36.2 Transcript Type= protein_coding
chr7	106090505	106112576	106090505	106112576	-	ENST00000011473.6@SYPL1	ENST00000011473.6	protein_coding	106112479,106112140,106099158,106097690,106092949,106090505	106112576,106112211,106099282,106097897,106093137,106091939	Gene ID= ENSG00000008282.8 TPM= 13.27 Transcript Type= protein_coding
chr7	106090503	106112331	106090503	106112331	-	ENST00000455385.6@SYPL1	ENST00000455385.6	protein_coding	106112140,106099158,106097690,106092949,106090503	106112331,106099282,106097897,106093137,106091939	Gene ID= ENSG00000008282.8 TPM= 300.94 Transcript Type= protein_coding
chr7	106248285	106284576	106248285	106284576	-	transcript3704.chr7.nic@NAMPT	transcript3704.chr7.nic	protein_coding	106284348,106277023,106274946,106272530,106269154,106268464,106263392,106261588,106254364,106253017,106248285	106284576,106277179,106275049,106272658,106269312,106268600,106263617,106261707,106254504,106253151,106251193	Gene ID= ENSG00000105835.11 TPM= 4.34 Transcript Type= NA
chr7	106248285	106285192	106248285	106285192	-	ENST00000222553.7@NAMPT	ENST00000222553.7	protein_coding	106284828,106277023,106274946,106272530,106269154,106268464,106263392,106261588,106254364,106253017,106248285	106285192,106277179,106275049,106272658,106269312,106268600,106263617,106261707,106254504,106253151,106251193	Gene ID= ENSG00000105835.11 TPM= 21.72 Transcript Type= protein_coding
chr7	106659317	106660926	106659317	106660926	-	ENST00000315965.6@CCDC71L	ENST00000315965.6	protein_coding	106660592,106660555,106659317	106660926,106660558,106660552	Gene ID= ENSG00000253276.2 TPM= 3.86 Transcript Type= protein_coding
chr7	107044649	107161811	107044649	107161811	+	ENST00000265717.4@PRKAR2B	ENST00000265717.4	protein_coding	107044649,107070281,107121952,107128212,107140847,107146308,107150922,107153177,107156984,107157186,107159449	107045214,107070316,107122004,107128295,107140953,107146461,107151023,107153251,107157049,107157324,107161811	Gene ID= ENSG00000005249.12 TPM= 3.86 Transcript Type= protein_coding
chr7	107168961	107202508	107168961	107202508	+	ENST00000468410.5@HBP1	ENST00000468410.5	protein_coding	107168961,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160,107201414	107169027,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107200301,107202508	Gene ID= ENSG00000105856.13 TPM= 16.89 Transcript Type= protein_coding
chr7	107168981	107202518	107168981	107202518	+	transcript3732.chr7.nic@HBP1	transcript3732.chr7.nic	protein_coding	107168981,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160	107169027,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107202518	Gene ID= ENSG00000105856.13 TPM= 6.76 Transcript Type= NA
chr7	107168981	107202508	107168981	107202508	+	transcript3733.chr7.nnic@HBP1	transcript3733.chr7.nnic	protein_coding	107168981,107179879,107182373,107185801,107186361,107186569,107190173,107195834,107200160,107201414	107169027,107180062,107182601,107185942,107186472,107186681,107190317,107196151,107200301,107202508	Gene ID= ENSG00000105856.13 TPM= 1.93 Transcript Type= NA
chr7	107169000	107202508	107169000	107202508	+	transcript3734.chr7.nnic@HBP1	transcript3734.chr7.nnic	protein_coding	107169000,107179879,107182373,107185801,107186361,107186569,107190173,107195834,107200160,107201414	107169185,107180062,107182601,107185942,107186472,107186681,107190317,107196151,107200301,107202508	Gene ID= ENSG00000105856.13 TPM= 1.93 Transcript Type= NA
chr7	107169015	107202529	107169015	107202529	+	ENST00000222574.8@HBP1	ENST00000222574.8	protein_coding	107169015,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160,107201414	107169185,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107200301,107202529	Gene ID= ENSG00000105856.13 TPM= 22.68 Transcript Type= protein_coding
chr7	107202564	107564514	107202564	107564514	-	ENST00000297135.7@COG5	ENST00000297135.7	protein_coding	107563803,107557976,107554285,107548278,107548111,107527237,107412502,107372595,107362308,107362033,107324440,107298142,107283571,107281300,107258273,107256732,107248396,107236450,107230615,107211099,107210526,107202564	107564514,107558115,107554342,107548332,107548180,107527357,107412632,107372760,107362420,107362110,107324521,107298346,107283732,107281399,107258383,107256794,107248499,107236687,107230691,107211225,107210605,107203630	Gene ID= ENSG00000164597.13 TPM= 3.86 Transcript Type= protein_coding
chr7	107579977	107621870	107579977	107621870	+	ENST00000005259.8@BCAP29	ENST00000005259.8	protein_coding	107579977,107580759,107583882,107593955,107595867,107600397,107613332,107618328	107580301,107580864,107583982,107594105,107596002,107600505,107613432,107621870	Gene ID= ENSG00000075790.10 TPM= 11.58 Transcript Type= protein_coding
chr7	107580244	107601887	107580244	107601887	+	transcript3765.chr7.nic@BCAP29	transcript3765.chr7.nic	protein_coding	107580244,107580759,107583882,107593955,107595867,107600397	107580301,107580864,107583982,107594105,107596002,107601887	Gene ID= ENSG00000075790.10 TPM= 4.83 Transcript Type= NA
chr7	107890970	107921203	107890970	107921203	+	ENST00000205402.9@DLD	ENST00000205402.9	protein_coding	107890970,107893200,107901738,107902325,107903478,107904958,107905361,107906267,107915506,107916794,107917273,107917924,107919010,107919194	107891289,107893278,107901817,107902393,107903547,107905058,107905504,107906368,107915696,107916964,107917462,107918061,107919099,107921203	Gene ID= ENSG00000091140.13 TPM= 29.44 Transcript Type= protein_coding
chr7	107891173	107919713	107891173	107919713	+	ENST00000440410.5@DLD	ENST00000440410.5	protein_coding	107891173,107893200,107901738,107903478,107904958,107905361,107906267,107915506,107916794,107917273,107917924,107919010,107919194	107891289,107893278,107901817,107903547,107905058,107905504,107906368,107915696,107916964,107917462,107918061,107919099,107919713	Gene ID= ENSG00000091140.13 TPM= 2.9 Transcript Type= protein_coding
chr7	107923803	108002027	107923803	108002027	-	ENST00000393561.5@LAMB1	ENST00000393561.5	protein_coding	108001558,107998357,107994887,107986175,107986022,107980609,107978047,107975689,107975234,107974986,107972992,107964552,107962905,107961549,107961206,107960445,107959691,107959249,107955467,107953530,107952009,107951226,107939989,107937093,107935415,107932174,107931356,107929412,107929064,107926183,107924230,107923803	108002027,107998492,107994960,107986363,107986085,107980811,107978167,107975877,107975413,107975098,107973071,107964687,107963063,107961676,107961329,107960649,107959834,107959480,107955630,107953754,107952223,107951322,107940358,107937277,107935656,107932377,107931500,107929619,107929205,107926359,107924389,107924087	Gene ID= ENSG00000091136.13 TPM= 29.92 Transcript Type= protein_coding
chr7	108471845	108526138	108471845	108526138	-	transcript3804.chr7.nic@PNPLA8	transcript3804.chr7.nic	protein_coding	108526029,108521476,108514436,108514144,108502491,108497483,108496584,108491410,108487945,108479184,108471845	108526138,108521521,108515574,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 9.01 Transcript Type= NA
chr7	108471627	108526315	108471627	108526315	-	ENST00000453144.5@PNPLA8	ENST00000453144.5	protein_coding	108526029,108514436,108514144,108502491,108497483,108496584,108491410,108487759,108479184,108471627	108526315,108515447,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 2.65 Transcript Type= protein_coding
chr7	108471661	108526318	108471661	108526318	-	ENST00000436062.5@PNPLA8	ENST00000436062.5	protein_coding	108526029,108514436,108514144,108502491,108497483,108496584,108491410,108487759,108479184,108471661	108526318,108515574,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 20.51 Transcript Type= protein_coding
chr7	108562227	108569723	108562227	108569723	-	ENST00000415914.3@THAP5	ENST00000415914.3	protein_coding	108569490,108565830,108562227	108569723,108566022,108565105	Gene ID= ENSG00000177683.13 TPM= 16.41 Transcript Type= protein_coding
chr7	108569568	108574850	108569568	108574850	+	ENST00000249356.3@DNAJB9	ENST00000249356.3	protein_coding	108569568,108571717,108572899	108570103,108571943,108574850	Gene ID= ENSG00000128590.4 TPM= 133.21 Transcript Type= protein_coding
chr7	111561952	111562478	111561952	111562478	-	transcript3858.chr7.nnic@NA	transcript3858.chr7.nnic	NA	111561952	111562478	Gene ID= novel_gene_chr7_3859 TPM= 2.9 Transcript Type= NA
chr7	112206588	112343096	112206588	112343096	+	ENST00000361822.7@ZNF277	ENST00000361822.7	protein_coding	112206588,112286873,112295869,112296229,112318182,112327717,112330084,112336104,112337730,112339843,112340872,112342561	112206807,112287074,112295957,112296311,112318273,112327827,112330216,112336171,112337826,112339885,112341046,112343096	Gene ID= ENSG00000198839.9 TPM= 3.86 Transcript Type= protein_coding
chr7	112206682	112343951	112206682	112343951	+	transcript3868.chr7.nic@ZNF277	transcript3868.chr7.nic	protein_coding	112206682,112286873,112296229,112318182,112327717,112330084,112336104,112337730,112339843,112340872,112342561	112206807,112287074,112296311,112318273,112327827,112330216,112336171,112337826,112339885,112341046,112343951	Gene ID= ENSG00000198839.9 TPM= 1.93 Transcript Type= NA
chr7	112452058	112477200	112452058	112477200	+	ENST00000535603.5@IFRD1	ENST00000535603.5	protein_coding	112452058,112455763,112456002,112456914,112458861,112461866,112462001,112462270,112467981,112472219,112472766,112475430	112452511,112455867,112456086,112457038,112459018,112461916,112462179,112462378,112468115,112472347,112472861,112477200	Gene ID= ENSG00000006652.13 TPM= 2.9 Transcript Type= protein_coding
chr7	112450428	112476192	112450428	112476192	+	ENST00000403825.7@IFRD1	ENST00000403825.7	protein_coding	112450428,112455763,112456002,112456914,112458861,112461866,112462001,112462270,112467981,112472219,112472766,112475430	112450782,112455867,112456086,112457038,112459018,112461916,112462179,112462378,112468115,112472347,112472861,112476192	Gene ID= ENSG00000006652.13 TPM= 431.49 Transcript Type= protein_coding
chr7	112450458	112458336	112450458	112458336	+	ENST00000429071.5@IFRD1	ENST00000429071.5	protein_coding	112450458,112455763,112456002,112456914	112450782,112455867,112456086,112458336	Gene ID= ENSG00000006652.13 TPM= 6.76 Transcript Type= protein_coding
chr7	112762382	112790592	112762382	112790592	-	ENST00000312814.10@TMEM168	ENST00000312814.10	protein_coding	112790160,112783698,112775176,112772781,112762382	112790592,112784953,112775318,112773055,112767744	Gene ID= ENSG00000146802.12 TPM= 1.93 Transcript Type= protein_coding
chr7	112819147	112939916	112819147	112939916	-	ENST00000297145.8@BMT2	ENST00000297145.8	protein_coding	112939591,112915306,112895569,112832561,112819147	112939916,112915447,112895739,112832675,112822373	Gene ID= ENSG00000164603.11 TPM= 6.76 Transcript Type= protein_coding
chr7	113116718	113118613	113116718	113118613	-	ENST00000397764.7@SMIM30	ENST00000397764.7	protein_coding	113118528,113118068,113116718	113118613,113118161,113117607	Gene ID= ENSG00000214194.8 TPM= 21.24 Transcript Type= protein_coding
chr7	113876777	113919065	113876777	113919065	-	ENST00000284601.3@PPP1R3A	ENST00000284601.3	protein_coding	113918215,113882262,113882039,113876777	113919065,113882320,113882163,113880125	Gene ID= ENSG00000154415.7 TPM= 20.27 Transcript Type= protein_coding
chr7	116210493	116258783	116210493	116258783	+	ENST00000358204.8@TES	ENST00000358204.8	protein_coding	116210493,116234534,116249020,116250161,116251760,116252318,116257294	116210734,116234619,116249272,116250496,116251975,116252476,116258783	Gene ID= ENSG00000135269.17 TPM= 9.65 Transcript Type= protein_coding
chr7	116499390	116508541	116499390	116508541	+	ENST00000222693.4@CAV2	ENST00000222693.4	protein_coding	116499390,116500260,116505971	116499931,116500447,116508541	Gene ID= ENSG00000105971.14 TPM= 9.65 Transcript Type= protein_coding
chr7	116524785	116561176	116524785	116561176	+	ENST00000341049.6@CAV1	ENST00000341049.6	protein_coding	116524785,116526525,116558946	116525092,116526689,116561176	Gene ID= ENSG00000105974.11 TPM= 22.85 Transcript Type= protein_coding
chr7	116525009	116561184	116525009	116561184	+	ENST00000614113.4@CAV1	ENST00000614113.4	protein_coding	116525009,116526525,116558946	116525805,116526689,116561184	Gene ID= ENSG00000105974.11 TPM= 3.54 Transcript Type= protein_coding
chr7	116526293	116561176	116526293	116561176	+	ENST00000393467.1@CAV1	ENST00000393467.1	protein_coding	116526293,116558946	116526689,116561176	Gene ID= ENSG00000105974.11 TPM= 8.37 Transcript Type= protein_coding
chr7	116672422	116769909	116672422	116769909	+	transcript3962.chr7.nic@MET	transcript3962.chr7.nic	protein_coding	116672422,116699071,116731668,116739950,116740852,116755355,116757437,116757638,116758459,116759391,116763050,116769645	116672577,116700284,116731859,116740084,116741025,116755515,116757539,116757774,116758620,116759490,116763268,116769909	Gene ID= ENSG00000105976.14 TPM= 3.38 Transcript Type= NA
chr7	116672392	116798386	116672392	116798386	+	ENST00000397752.7@MET	ENST00000397752.7	protein_coding	116672392,116699071,116731668,116739950,116740852,116755355,116757437,116757638,116758459,116759391,116763050,116769645,116771498,116771849,116774881,116777389,116778776,116781988,116783304,116795655,116795887	116672577,116700284,116731859,116740084,116741025,116755515,116757539,116757774,116758620,116759490,116763268,116769791,116771654,116771989,116775111,116777469,116778957,116782097,116783469,116795791,116798386	Gene ID= ENSG00000105976.14 TPM= 14 Transcript Type= protein_coding
chr7	116862473	116922049	116862473	116922049	+	ENST00000361183.7@CAPZA2	ENST00000361183.7	protein_coding	116862473,116888127,116892994,116898772,116904177,116906263,116910233,116912069,116916060,116917727	116862650,116888190,116893045,116898835,116904383,116906342,116910311,116912140,116916122,116922049	Gene ID= ENSG00000198898.13 TPM= 4.83 Transcript Type= protein_coding
chr7	116952592	116954312	116952592	116954312	-	transcript3994.chr7.nnic@NA	transcript3994.chr7.nnic	NA	116952592	116954312	Gene ID= novel_gene_chr7_3995 TPM= 1.93 Transcript Type= NA
chr7	116953379	117230103	116953379	117230103	+	ENST00000323984.7@ST7	ENST00000323984.7	protein_coding	116953379,117099762,117119561,117129793,117130491,117131885,117134124,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762	116953691,117099844,117119720,117129847,117130606,117131960,117134192,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230103	Gene ID= ENSG00000004866.20 TPM= 1.93 Transcript Type= protein_coding
chr7	118184032	118192824	118184032	118192824	+	ENST00000249299.6@LSM8	ENST00000249299.6	protein_coding	118184032,118185654,118188278,118191912	118184254,118185694,118188405,118192824	Gene ID= ENSG00000128534.7 TPM= 16.41 Transcript Type= protein_coding
chr7	120787320	120858357	120787320	120858357	-	ENST00000222747.7@TSPAN12	ENST00000222747.7	protein_coding	120857820,120856698,120840027,120838777,120815729,120810463,120806549,120787320	120858357,120856833,120840109,120838912,120815803,120810570,120806692,120788897	Gene ID= ENSG00000106025.8 TPM= 2.9 Transcript Type= protein_coding
chr7	120950749	120977216	120950749	120977216	+	ENST00000315870.9@ING3	ENST00000315870.9	protein_coding	120950749,120951164,120953304,120955559,120964742,120966626,120967529,120967934,120969011,120970688,120973205,120974728	120950924,120951235,120953404,120955624,120964838,120966697,120967648,120968091,120969204,120970880,120973243,120977216	Gene ID= ENSG00000071243.15 TPM= 1.93 Transcript Type= protein_coding
chr7	120988677	121297444	120988677	121297444	+	ENST00000310396.9@CPED1	ENST00000310396.9	protein_coding	120988677,120989391,121015665,121046887,121064238,121097699,121099926,121124331,121125820,121127090,121128382,121130125,121133823,121136040,121140827,121141973,121236714,121244202,121266227,121266707,121267215,121271284,121295440	120988912,120989870,121015848,121046993,121064313,121097831,121100094,121124473,121125892,121127257,121128486,121130294,121133893,121136090,121141013,121142141,121236831,121244338,121266447,121266808,121267302,121271430,121297444	Gene ID= ENSG00000106034.17 TPM= 1.93 Transcript Type= protein_coding
chr7	121348851	121396334	121348851	121396334	-	ENST00000359943.7@FAM3C	ENST00000359943.7	protein_coding	121396162,121382957,121378910,121372110,121371300,121364130,121362897,121360043,121351143,121348851	121396334,121383010,121379014,121372139,121371423,121364188,121362947,121360127,121351269,121350550	Gene ID= ENSG00000196937.10 TPM= 40.54 Transcript Type= protein_coding
chr7	123536997	123557780	123536997	123557780	-	ENST00000471770.5@NDUFA5	ENST00000471770.5	protein_coding	123557625,123557404,123550470,123545611,123536997	123557780,123557448,123550586,123545676,123542220	Gene ID= ENSG00000128609.14 TPM= 3.54 Transcript Type= protein_coding
chr7	123541029	123558255	123541029	123558255	-	ENST00000355749.6@NDUFA5	ENST00000355749.6	protein_coding	123557775,123557404,123550470,123545611,123541029	123558255,123557448,123550586,123545676,123542220	Gene ID= ENSG00000128609.14 TPM= 366.69 Transcript Type= protein_coding
chr7	123541030	123557904	123541030	123557904	-	ENST00000611607.4@NDUFA5	ENST00000611607.4	protein_coding	123557775,123550470,123545611,123541030	123557904,123550586,123545676,123542220	Gene ID= ENSG00000128609.14 TPM= 9.53 Transcript Type= protein_coding
chr7	123541030	123557904	123541030	123557904	-	ENST00000618945.4@NDUFA5	ENST00000618945.4	protein_coding	123557775,123557404,123545611,123541030	123557904,123557448,123545676,123542220	Gene ID= ENSG00000128609.14 TPM= 32.7 Transcript Type= protein_coding
chr7	123601842	123637878	123601842	123637878	+	transcript4047.chr7.nnic@ASB15	transcript4047.chr7.nnic	protein_coding	123601842,123603976,123614501,123616221,123616364,123617579,123624569,123627110,123628864,123629966,123636809	123601914,123604212,123614609,123616273,123616495,123617664,123624814,123627281,123629434,123630119,123637878	Gene ID= ENSG00000146809.12 TPM= 1.93 Transcript Type= NA
chr7	123601867	123637878	123601867	123637878	+	ENST00000451215.5@ASB15	ENST00000451215.5	protein_coding	123601867,123604032,123608594,123614501,123616221,123616364,123617579,123624569,123627110,123628864,123629966,123636809	123601914,123604212,123608654,123614609,123616273,123616495,123617737,123624814,123627281,123629434,123630119,123637878	Gene ID= ENSG00000146809.12 TPM= 1.93 Transcript Type= protein_coding
chr7	123655807	123664290	123655807	123664290	+	ENST00000458573.2@LMOD2	ENST00000458573.2	protein_coding	123655807,123661860,123663719	123656236,123663203,123664290	Gene ID= ENSG00000170807.11 TPM= 26.06 Transcript Type= protein_coding
chr7	123696645	123749068	123696645	123749068	-	transcript4064.chr7.nic@WASL	transcript4064.chr7.nic	protein_coding	123748618,123709089,123706740,123706277,123704634,123696645	123749068,123709223,123706826,123706373,123704657,123696747	Gene ID= ENSG00000106299.7 TPM= 2.9 Transcript Type= NA
chr7	123681935	123749067	123681935	123749067	-	ENST00000223023.4@WASL	ENST00000223023.4	protein_coding	123748618,123709089,123706740,123706277,123704634,123696579,123695823,123694715,123692347,123689042,123681935	123749067,123709223,123706826,123706373,123704657,123696747,123695865,123694868,123692867,123689150,123684580	Gene ID= ENSG00000106299.7 TPM= 53.09 Transcript Type= protein_coding
chr7	123749195	123750978	123749195	123750978	+	transcript4065.chr7.nnic@NA	transcript4065.chr7.nnic	NA	123749195	123750978	Gene ID= novel_gene_chr7_4066 TPM= 8.69 Transcript Type= NA
chr7	127342859	127346842	127342859	127346842	-	transcript4077.chr7.nnic@NA	transcript4077.chr7.nnic	NA	127342859	127346842	Gene ID= novel_gene_chr7_4078 TPM= 1.93 Transcript Type= NA
chr7	127580618	127585607	127580618	127585607	-	ENST00000321407.2@GCC1	ENST00000321407.2	protein_coding	127584151,127580618	127585607,127583309	Gene ID= ENSG00000179562.2 TPM= 40.54 Transcript Type= protein_coding
chr7	127588345	127591705	127588345	127591705	+	ENST00000000233.9@ARF5	ENST00000000233.9	protein_coding	127588345,127589083,127589485,127590066,127590963,127591213	127588565,127589163,127589594,127590137,127591088,127591705	Gene ID= ENSG00000004059.10 TPM= 135.14 Transcript Type= protein_coding
chr7	127652180	128092607	127652180	128092607	+	ENST00000354725.7@SND1	ENST00000354725.7	protein_coding	127652180,127686613,127694828,127698875,127701163,127702435,127703165,127704839,127707557,127721287,127807484,127844324,127887902,127904747,127929188,127990947,128074502,128081360,128084724,128085711,128086938,128089489,128091837,128091993	127652451,127686762,127694948,127698953,127701323,127702526,127703323,127704945,127707647,127721400,127807573,127844424,127888012,127904819,127929329,127991056,128074690,128081501,128084847,128085780,128087051,128089692,128091881,128092607	Gene ID= ENSG00000197157.10 TPM= 100.39 Transcript Type= protein_coding
chr7	127938259	128030818	127938259	128030818	-	transcript4099.chr7.nnic@LRRC4	transcript4099.chr7.nnic	protein_coding	128028867,127961339,127938259	128030818,127961427,127938628	Gene ID= ENSG00000128594.7 TPM= 2.9 Transcript Type= NA
chr7	128310397	128343858	128310397	128343858	-	transcript4111.chr7.nnic@RBM28	transcript4111.chr7.nnic	protein_coding	128343676,128341290,128339633,128339227,128338726,128338250,128337131,128335847,128335543,128333290,128330819,128325818,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128310397	128343858,128341355,128339791,128339321,128338801,128338342,128337202,128336042,128335679,128333362,128330928,128325891,128324694,128323591,128321424,128318106,128317733,128315020,128313274,128310931	Gene ID= ENSG00000106344.8 TPM= 1.93 Transcript Type= NA
chr7	128297685	128343908	128297685	128343908	-	ENST00000223073.6@RBM28	ENST00000223073.6	protein_coding	128343676,128339633,128339227,128338726,128338250,128337131,128335847,128335543,128333290,128330819,128325818,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128297685	128343908,128339791,128339321,128338801,128338342,128337202,128336042,128335679,128333362,128330928,128325891,128324694,128323591,128321424,128318106,128317733,128315020,128313274,128310931	Gene ID= ENSG00000106344.8 TPM= 25.1 Transcript Type= protein_coding
chr7	128310397	128343897	128310397	128343897	-	transcript4118.chr7.nic@RBM28	transcript4118.chr7.nic	protein_coding	128343676,128339633,128339227,128338726,128338250,128337131,128335543,128333290,128330819,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128310397	128343897,128339791,128339321,128338801,128338342,128337202,128336042,128333362,128330928,128325891,128323591,128321424,128318106,128317733,128315020,128313274,128310931	Gene ID= ENSG00000106344.8 TPM= 1.93 Transcript Type= NA
chr7	128350326	128361685	128350326	128361685	-	ENST00000446477.6@PRRT4	ENST00000446477.6	protein_coding	128361561,128361306,128359340,128359149,128358681,128350326	128361685,128361422,128360063,128359253,128358800,128352678	Gene ID= ENSG00000224940.8 TPM= 1.93 Transcript Type= protein_coding
chr7	128392278	128410009	128392278	128410009	-	transcript4125.chr7.nic@IMPDH1	transcript4125.chr7.nic	protein_coding	128409756,128409289,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392278	128410009,128409484,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 2.9 Transcript Type= NA
chr7	128392301	128409982	128392301	128409982	-	ENST00000348127.10@IMPDH1	ENST00000348127.10	protein_coding	128409756,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392301	128409982,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 1.93 Transcript Type= protein_coding
chr7	128455891	128458416	128455891	128458416	+	ENST00000257696.4@HILPDA	ENST00000257696.4	protein_coding	128455891,128457201	128456023,128458416	Gene ID= ENSG00000135245.9 TPM= 1.93 Transcript Type= protein_coding
chr7	128476729	128502924	128476729	128502924	+	ENST00000262432.12@METTL2B	ENST00000262432.12	protein_coding	128476729,128477082,128479158,128480647,128488101,128493804,128498036,128500903,128501762	128476875,128477173,128479513,128480696,128488161,128493943,128498142,128500968,128502924	Gene ID= ENSG00000165055.15 TPM= 19.31 Transcript Type= protein_coding
chr7	128653539	128654986	128653539	128654986	+	transcript4139.chr7.nnic@NA	transcript4139.chr7.nnic	NA	128653539	128654986	Gene ID= novel_gene_chr7_4140 TPM= 3.86 Transcript Type= NA
chr7	128661606	128663479	128661606	128663479	+	transcript4143.chr7.nnic@NA	transcript4143.chr7.nnic	NA	128661606	128663479	Gene ID= novel_gene_chr7_4144 TPM= 1.93 Transcript Type= NA
chr7	128739292	128771477	128739292	128771477	+	ENST00000542996.6@CALU	ENST00000542996.6	protein_coding	128739292,128747553,128748573,128754529,128758871,128759792,128767456,128769063	128739432,128748367,128748804,128754722,128759037,128759852,128767655,128771477	Gene ID= ENSG00000128595.16 TPM= 6.44 Transcript Type= protein_coding
chr7	128739363	128770576	128739363	128770576	+	ENST00000449187.6@CALU	ENST00000449187.6	protein_coding	128739363,128748573,128754529,128758871,128759792,128767456,128769063	128739432,128748804,128754722,128759037,128759852,128767655,128770576	Gene ID= ENSG00000128595.16 TPM= 66.61 Transcript Type= protein_coding
chr7	128739342	128771474	128739342	128771474	+	ENST00000249364.8@CALU	ENST00000249364.8	protein_coding	128739342,128748573,128754262,128758871,128759792,128767456,128769063	128739432,128748804,128754455,128759037,128759852,128767655,128771474	Gene ID= ENSG00000128595.16 TPM= 46.02 Transcript Type= protein_coding
chr7	128769970	128773401	128769970	128773401	+	transcript4174.chr7.nnic@NA	transcript4174.chr7.nnic	NA	128769970	128773401	Gene ID= novel_gene_chr7_4175 TPM= 7.72 Transcript Type= NA
chr7	128830377	128859272	128830377	128859272	+	ENST00000325888.12@FLNC	ENST00000325888.12	protein_coding	128830377,128835326,128837160,128837398,128837637,128837987,128838267,128838603,128840023,128840548,128840834,128841170,128841454,128842231,128842575,128842794,128843229,128843408,128843796,128844004,128844658,128845990,128846301,128846745,128847697,128847945,128848561,128848793,128849181,128849331,128849976,128850384,128850803,128851232,128851455,128852591,128852828,128853469,128853715,128853974,128854413,128854775,128855199,128856518,128856745,128857118,128858008,128858336	128830989,128835574,128837257,128837548,128837755,128838064,128838429,128838803,128840160,128840674,128840970,128841363,128841567,128842374,128842698,128842954,128843319,128843577,128843913,128844266,128845255,128846163,128846463,128846905,128847864,128848068,128848717,128848982,128849204,128849578,128850074,128850483,128850943,128851360,128851628,128852752,128853031,128853621,128853837,128854216,128854682,128854912,128855314,128856650,128856921,128857336,128858217,128859272	Gene ID= ENSG00000128591.15 TPM= 1424.04 Transcript Type= protein_coding
chr7	128830426	128859274	128830426	128859274	+	ENST00000346177.6@FLNC	ENST00000346177.6	protein_coding	128830426,128835326,128837160,128837398,128837637,128837987,128838267,128838603,128840023,128840548,128840834,128841170,128841454,128842231,128842575,128842794,128843229,128843408,128843796,128844004,128844658,128845990,128846301,128846745,128847697,128847945,128848561,128848793,128849181,128849331,128850384,128850803,128851232,128851455,128852591,128852828,128853469,128853715,128853974,128854413,128854775,128855199,128856518,128856745,128857118,128858008,128858336	128830989,128835574,128837257,128837548,128837755,128838064,128838429,128838803,128840160,128840674,128840970,128841363,128841567,128842374,128842698,128842954,128843319,128843577,128843913,128844266,128845255,128846163,128846463,128846905,128847864,128848068,128848717,128848982,128849204,128849578,128850483,128850943,128851360,128851628,128852752,128853031,128853621,128853837,128854216,128854682,128854912,128855314,128856650,128856921,128857336,128858217,128859274	Gene ID= ENSG00000128591.15 TPM= 5090.29 Transcript Type= protein_coding
chr7	128862826	128865843	128862826	128865843	+	ENST00000249289.4@ATP6V1F	ENST00000249289.4	protein_coding	128862826,128865377	128863062,128865843	Gene ID= ENSG00000128524.4 TPM= 80.12 Transcript Type= protein_coding
chr7	128867647	128872045	128867647	128872045	+	transcript4267.chr7.nnic@NA	transcript4267.chr7.nnic	NA	128867647	128872045	Gene ID= novel_gene_chr7_4268 TPM= 18.34 Transcript Type= NA
chr7	128955088	129055172	128955088	129055172	-	transcript4274.chr7.nnic@TNPO3	transcript4274.chr7.nnic	protein_coding	129054651,129017957,129016983,129014979,129001059,129000429,128997389,128993807,128991999,128989961,128986729,128984168,128982248,128979971,128978983,128975819,128974868,128972426,128970148,128967280,128957224,128955088	129055172,129018157,129017056,129015135,129001234,129000567,128997535,128993914,128992090,128990100,128986920,128984259,128982324,128980031,128979123,128975935,128974962,128972582,128970315,128967392,128957315,128955385	Gene ID= ENSG00000064419.13 TPM= 14.48 Transcript Type= NA
chr7	129144691	129168830	129144691	129168830	+	transcript4281.chr7.nic@TSPAN33	transcript4281.chr7.nic	protein_coding	129144691,129161679,129162394,129162833,129164474,129166778,129167399	129145082,129161736,129162521,129162907,129164569,129166906,129168830	Gene ID= ENSG00000158457.5 TPM= 6.76 Transcript Type= NA
chr7	129144892	129168796	129144892	129168796	+	ENST00000486685.2@TSPAN33	ENST00000486685.2	protein_coding	129144892,129161679,129162394,129162833,129164474,129166778,129167399,129167773	129145082,129161736,129162521,129162907,129164569,129166906,129167560,129168796	Gene ID= ENSG00000158457.5 TPM= 4.83 Transcript Type= protein_coding
chr7	129225050	129430211	129225050	129430211	+	ENST00000446544.6@AHCYL2	ENST00000446544.6	protein_coding	129225050,129379641,129389056,129389634,129397222,129400290,129403379,129405097,129405836,129406378,129409476,129413594,129422840,129424874,129425063,129426443,129427039	129225439,129379749,129389199,129389734,129397324,129400384,129403485,129405213,129405899,129406466,129409546,129413688,129422938,129424942,129425141,129426563,129430211	Gene ID= ENSG00000158467.16 TPM= 11.58 Transcript Type= protein_coding
chr7	129434396	129485892	129434396	129485892	+	transcript4289.chr7.nnic@STRIP2	transcript4289.chr7.nnic	protein_coding	129434396,129440022,129451613,129453227,129454142,129454421,129455244,129456439,129458215,129458712,129459517,129460301,129462966,129464044,129464612,129467350,129470649,129480785,129482842,129485579	129434601,129440091,129451747,129453347,129454210,129454527,129455371,129456642,129458450,129458777,129459580,129460372,129463040,129464141,129464738,129467450,129470715,129480889,129483046,129485892	Gene ID= ENSG00000128578.9 TPM= 3.86 Transcript Type= NA
chr7	129434446	129483631	129434446	129483631	+	ENST00000435494.2@STRIP2	ENST00000435494.2	protein_coding	129434446,129440022,129444024,129451613,129453227,129454142,129454421,129455244,129456439,129458215,129458712,129459517,129460301,129462966,129464044,129464612,129467350,129470649,129480785,129482842	129434601,129440091,129444098,129451747,129453347,129454210,129454527,129455371,129456642,129458450,129458777,129459580,129460372,129463040,129464141,129464738,129467450,129470715,129480889,129483631	Gene ID= ENSG00000128578.9 TPM= 14.96 Transcript Type= protein_coding
chr7	129434433	129488399	129434433	129488399	+	ENST00000249344.6@STRIP2	ENST00000249344.6	protein_coding	129434433,129440022,129444024,129451613,129453227,129454142,129454421,129455244,129456439,129458215,129458712,129459517,129460301,129462966,129464044,129464612,129467350,129470649,129480785,129482842,129485579	129434601,129440091,129444098,129451747,129453347,129454210,129454527,129455371,129456642,129458450,129458777,129459580,129460372,129463040,129464141,129464738,129467450,129470715,129480889,129483046,129488399	Gene ID= ENSG00000128578.9 TPM= 63.23 Transcript Type= protein_coding
chr7	129434988	129437444	129434988	129437444	+	transcript4301.chr7.nnic@NA	transcript4301.chr7.nnic	NA	129434988	129437444	Gene ID= novel_gene_chr7_4302 TPM= 1.93 Transcript Type= NA
chr7	129611228	129611664	129611228	129611664	-	transcript4303.chr7.nnic@NA	transcript4303.chr7.nnic	NA	129611228	129611664	Gene ID= novel_gene_chr7_4304 TPM= 6.76 Transcript Type= NA
chr7	129611784	129737770	129611784	129737770	+	transcript4305.chr7.nnic@NRF1	transcript4305.chr7.nnic	protein_coding	129611784,129641725,129657343,129671429,129677632,129690406,129709075,129710374,129711475,129717219,129727241,129735043,129736481	129611824,129641822,129657574,129671543,129677758,129690546,129709233,129710571,129711576,129717376,129727365,129735294,129737770	Gene ID= ENSG00000106459.14 TPM= 1.93 Transcript Type= NA
chr7	129611714	129757080	129611714	129757080	+	ENST00000393232.5@NRF1	ENST00000393232.5	protein_coding	129611714,129657346,129671429,129677632,129690406,129709075,129710374,129711475,129717219,129727241,129755018	129611824,129657574,129671543,129677758,129690546,129709233,129710571,129711576,129717376,129727365,129757080	Gene ID= ENSG00000106459.14 TPM= 5.79 Transcript Type= protein_coding
chr7	129611756	129756015	129611756	129756015	+	ENST00000223190.8@NRF1	ENST00000223190.8	protein_coding	129611756,129657343,129671429,129677632,129690406,129709075,129710374,129711475,129717219,129727241,129755018	129611824,129657574,129671543,129677758,129690546,129709233,129710571,129711576,129717376,129727365,129756015	Gene ID= ENSG00000106459.14 TPM= 8.69 Transcript Type= protein_coding
chr7	129613824	129616441	129613824	129616441	+	transcript4316.chr7.nnic@NA	transcript4316.chr7.nnic	NA	129613824	129616441	Gene ID= novel_gene_chr7_4317 TPM= 1.93 Transcript Type= NA
chr7	129833177	129952989	129833177	129952989	-	transcript4323.chr7.nic@UBE2H	transcript4323.chr7.nic	protein_coding	129952503,129880895,129879568,129858902,129857511,129839207,129833177	129952989,129880971,129879642,129858941,129857563,129839275,129835061	Gene ID= ENSG00000186591.11 TPM= 6.76 Transcript Type= NA
chr7	129830732	129952949	129830732	129952949	-	ENST00000355621.7@UBE2H	ENST00000355621.7	protein_coding	129952503,129880895,129879568,129858902,129857511,129839207,129830732	129952949,129880971,129879642,129858941,129857563,129839335,129835061	Gene ID= ENSG00000186591.11 TPM= 34.75 Transcript Type= protein_coding
chr7	130018292	130051392	130018292	130051392	-	transcript4333.chr7.nnic@ZC3HC1	transcript4333.chr7.nnic	protein_coding	130051221,130049033,130040951,130039464,130038735,130028902,130026158,130024263,130023511,130022319,130018292	130051392,130049144,130041101,130039547,130039341,130029029,130026312,130024506,130023723,130022525,130018732	Gene ID= ENSG00000091732.15 TPM= 4.12 Transcript Type= NA
chr7	130018292	130051392	130018292	130051392	-	transcript4339.chr7.nnic@ZC3HC1	transcript4339.chr7.nnic	protein_coding	130051221,130049033,130040951,130039464,130028720,130026158,130024263,130023511,130022319,130018292	130051392,130049144,130041101,130039547,130029029,130026312,130024506,130023723,130022525,130018732	Gene ID= ENSG00000091732.15 TPM= 6.24 Transcript Type= NA
chr7	130018286	130051451	130018286	130051451	-	ENST00000358303.8@ZC3HC1	ENST00000358303.8	protein_coding	130051221,130049033,130040951,130039464,130028902,130026158,130024263,130023511,130022319,130018286	130051451,130049144,130041101,130039547,130029029,130026312,130024506,130023723,130022525,130018732	Gene ID= ENSG00000091732.15 TPM= 142 Transcript Type= protein_coding
chr7	130018292	130051377	130018292	130051377	-	transcript4342.chr7.nnic@ZC3HC1	transcript4342.chr7.nnic	protein_coding	130050625,130049033,130040951,130039464,130028902,130026158,130024263,130023511,130022319,130018292	130051377,130049144,130041101,130039547,130029029,130026312,130024506,130023723,130022525,130018732	Gene ID= ENSG00000091732.15 TPM= 4.6 Transcript Type= NA
chr7	130018326	130051389	130018326	130051389	-	ENST00000481503.5@ZC3HC1	ENST00000481503.5	protein_coding	130051221,130049033,130040951,130039464,130028902,130026158,130024263,130023511,130022319,130018326	130051389,130049144,130041101,130039547,130029029,130026312,130024377,130023723,130022525,130018732	Gene ID= ENSG00000091732.15 TPM= 5.79 Transcript Type= protein_coding
chr7	130070527	130135720	130070527	130135720	+	transcript4357.chr7.nic@KLHDC10	transcript4357.chr7.nic	protein_coding	130070527,130116445,130120749,130122054,130124451,130125865,130127404,130129437,130130537	130070809,130116666,130120903,130122202,130124535,130125931,130127451,130129576,130135720	Gene ID= ENSG00000128607.13 TPM= 9.65 Transcript Type= NA
chr7	130164715	130205498	130164715	130205498	-	ENST00000397622.6@TMEM209	ENST00000397622.6	protein_coding	130205373,130203974,130203788,130202532,130201850,130192622,130185192,130184184,130181623,130178402,130175512,130173825,130173632,130170400,130164715	130205498,130204110,130203846,130202663,130202091,130192823,130185367,130184255,130181719,130178527,130175609,130173939,130173729,130170473,130166505	Gene ID= ENSG00000146842.16 TPM= 3.86 Transcript Type= protein_coding
chr7	130492093	130506292	130492093	130506292	+	ENST00000223215.8@MEST	ENST00000223215.8	protein_coding	130492093,130495368,130497156,130497936,130498139,130498419,130499875,130500462,130500789,130502644,130503933,130504939	130492339,130495522,130497235,130498013,130498275,130498477,130499915,130500532,130500890,130502720,130503996,130506292	Gene ID= ENSG00000106484.14 TPM= 9.65 Transcript Type= protein_coding
chr7	130506238	130668748	130506238	130668748	-	ENST00000425248.5@COPG2	ENST00000425248.5	protein_coding	130668632,130667482,130666849,130662967,130652869,130616990,130613544,130612152,130610953,130564260,130563269,130561033,130555037,130554481,130552355,130551241,130550524,130549314,130548403,130547674,130508562,130507685,130507274,130506238	130668748,130667534,130666929,130663038,130652948,130617065,130613636,130612238,130611110,130564393,130563336,130561221,130555132,130554724,130552430,130551344,130550649,130549376,130548542,130547845,130508659,130507823,130507372,130506806	Gene ID= ENSG00000158623.14 TPM= 11.58 Transcript Type= protein_coding
chr7	130732571	130734232	130732571	130734232	-	transcript4373.chr7.nnic@NA	transcript4373.chr7.nnic	NA	130732571	130734232	Gene ID= novel_gene_chr7_4374 TPM= 15.44 Transcript Type= NA
chr7	130913507	130921924	130913507	130921924	+	transcript4380.chr7.nnic@LINC00513	transcript4380.chr7.nnic	lincRNA	130913507,130914962,130921536	130913625,130915102,130921924	Gene ID= ENSG00000233559.1 TPM= 1.93 Transcript Type= NA
chr7	130939917	130940473	130939917	130940473	+	transcript4387.chr7.nnic@NA	transcript4387.chr7.nnic	NA	130939917	130940473	Gene ID= novel_gene_chr7_4388 TPM= 8.69 Transcript Type= NA
chr7	131024786	131028388	131024786	131028388	-	transcript4389.chr7.nnic@NA	transcript4389.chr7.nnic	NA	131024786	131028388	Gene ID= novel_gene_chr7_4390 TPM= 1.93 Transcript Type= NA
chr7	131327853	131487961	131327853	131487961	+	transcript4396.chr7.nnic@MKLN1	transcript4396.chr7.nnic	protein_coding	131327853,131375424,131387120,131388884,131397267,131399241,131411306,131414645,131429033,131437785,131443481,131445774,131463217,131464294,131466276,131470842,131478623,131487683	131327997,131375493,131387262,131388972,131397376,131399433,131411383,131414710,131429145,131437997,131443702,131445903,131463364,131464408,131466415,131470944,131478677,131487961	Gene ID= ENSG00000128585.17 TPM= 3.86 Transcript Type= NA
chr7	131327897	131487962	131327897	131487962	+	ENST00000458153.5@MKLN1	ENST00000458153.5	protein_coding	131327897,131375424,131387120,131388884,131397267,131399238,131411306,131414645,131429033,131437785,131443481,131445774,131463217,131464294,131466276,131470842,131478623,131487607	131327997,131375493,131387262,131388972,131397376,131399433,131411383,131414710,131429145,131437997,131443702,131445903,131463364,131464408,131466415,131470944,131478677,131487962	Gene ID= ENSG00000128585.17 TPM= 28.96 Transcript Type= nonsense_mediated_decay
chr7	132057405	132060910	132057405	132060910	+	transcript4422.chr7.nnic@NA	transcript4422.chr7.nnic	NA	132057405	132060910	Gene ID= novel_gene_chr7_4423 TPM= 2.9 Transcript Type= NA
chr7	133080745	133082070	133080745	133082070	-	transcript4436.chr7.nnic@CHCHD3	transcript4436.chr7.nnic	protein_coding	133081857,133080745	133082070,133081048	Gene ID= ENSG00000106554.12 TPM= 1.93 Transcript Type= NA
chr7	132784868	133082082	132784868	133082082	-	ENST00000262570.9@CHCHD3	ENST00000262570.9	protein_coding	133081857,133070142,133024546,132975169,132885662,132838399,132796442,132784868	133082082,133070229,133024627,132975286,132885745,132838469,132796577,132785660	Gene ID= ENSG00000106554.12 TPM= 321.45 Transcript Type= protein_coding
chr7	133253073	134065759	133253073	134065759	+	ENST00000253861.4@EXOC4	ENST00000253861.4	protein_coding	133253073,133274982,133288922,133305877,133317284,133356330,133374828,133475328,133480050,133630045,133817325,133895599,133917583,133937891,133997492,134004912,134007676,134064291	133253187,133275171,133289116,133306061,133317390,133356573,133375002,133475473,133480138,133630141,133817544,133895735,133917738,133938069,133997633,134005090,134007835,134065759	Gene ID= ENSG00000131558.14 TPM= 24.13 Transcript Type= protein_coding
chr7	134289332	134317051	134289332	134317051	-	ENST00000378509.8@SLC35B4	ENST00000378509.8	protein_coding	134316675,134309366,134306672,134304805,134302029,134301761,134300152,134299523,134296391,134289332	134317051,134309479,134306774,134304854,134302110,134301821,134300261,134299598,134296466,134295079	Gene ID= ENSG00000205060.10 TPM= 1.93 Transcript Type= protein_coding
chr7	134442350	134459142	134442350	134459142	-	ENST00000285930.8@AKR1B1	ENST00000285930.8	protein_coding	134458997,134451586,134450786,134449720,134448997,134448387,134447980,134447298,134445238,134442350	134459142,134451753,134450902,134449797,134449119,134448493,134448061,134447381,134445320,134442770	Gene ID= ENSG00000085662.13 TPM= 265.46 Transcript Type= protein_coding
chr7	134442387	134459102	134442387	134459102	-	ENST00000465351.5@AKR1B1	ENST00000465351.5	protein_coding	134458997,134451586,134450786,134449720,134448997,134448387,134447298,134445238,134442387	134459102,134451753,134450902,134449797,134449119,134448493,134448061,134445320,134442770	Gene ID= ENSG00000085662.13 TPM= 4.83 Transcript Type= retained_intron
chr7	134527597	134541408	134527597	134541408	+	transcript4463.chr7.nnic@AKR1B10	transcript4463.chr7.nnic	protein_coding	134527597,134529861,134530643,134531908,134533004,134535617,134536650,134537051,134537580,134538194,134538935,134541047	134527977,134529964,134530810,134532024,134533081,134535663,134536772,134537157,134537661,134538277,134539017,134541408	Gene ID= ENSG00000198074.9 TPM= 1.93 Transcript Type= NA
chr7	134527567	134541408	134527567	134541408	+	transcript4473.chr7.nnic@AKR1B10	transcript4473.chr7.nnic	protein_coding	134527567,134530643,134531908,134533004,134535617,134536650,134537051,134537580,134538194,134538935,134541047	134527977,134530810,134532024,134533081,134535663,134536772,134537157,134537661,134538277,134539017,134541408	Gene ID= ENSG00000198074.9 TPM= 2.9 Transcript Type= NA
chr7	134527567	134541408	134527567	134541408	+	transcript4474.chr7.nic@AKR1B10	transcript4474.chr7.nic	protein_coding	134527567,134530643,134531908,134533004,134535617,134536709,134537051,134537580,134538194,134538935,134541047	134527977,134530810,134532024,134533081,134535663,134536772,134537157,134537661,134538277,134539017,134541408	Gene ID= ENSG00000198074.9 TPM= 5.79 Transcript Type= NA
chr7	134535479	134541408	134535479	134541408	+	transcript4494.chr7.nnic@AKR1B10	transcript4494.chr7.nnic	protein_coding	134535479,134536650,134537051,134537580,134538194,134538935,134541047	134535663,134536772,134537157,134537661,134538277,134539017,134541408	Gene ID= ENSG00000198074.9 TPM= 12.55 Transcript Type= NA
chr7	134538774	134541408	134538774	134541408	+	transcript4506.chr7.nic@AKR1B10	transcript4506.chr7.nic	protein_coding	134538774,134541047	134539017,134541408	Gene ID= ENSG00000198074.9 TPM= 5.79 Transcript Type= NA
chr7	134527592	134541408	134527592	134541408	+	ENST00000359579.4@AKR1B10	ENST00000359579.4	protein_coding	134527592,134530643,134531908,134533004,134536650,134537051,134537580,134538194,134538935,134541047	134527977,134530810,134532024,134533081,134536772,134537157,134537661,134538277,134539017,134541408	Gene ID= ENSG00000198074.9 TPM= 1.93 Transcript Type= protein_coding
chr7	134548942	134579875	134548942	134579875	+	transcript4467.chr7.nnic@AKR1B15	transcript4467.chr7.nnic	protein_coding	134548942,134562009,134564598,134568158,134569413,134571604,134575420,134575821,134576349,134576963,134577704,134579507	134549249,134562211,134565546,134568325,134569529,134571681,134575542,134575927,134576430,134577046,134577786,134579875	Gene ID= ENSG00000227471.8 TPM= 12.55 Transcript Type= NA
chr7	134549015	134579875	134549015	134579875	+	transcript4475.chr7.nnic@AKR1B15	transcript4475.chr7.nnic	protein_coding	134549015,134568158,134569413,134571604,134573366,134575420,134575821,134576349,134576963,134577704,134579507	134549249,134568325,134569529,134571681,134573537,134575542,134575927,134576430,134577046,134577786,134579875	Gene ID= ENSG00000227471.8 TPM= 5.79 Transcript Type= NA
chr7	134548942	134579875	134548942	134579875	+	transcript4479.chr7.nnic@AKR1B15	transcript4479.chr7.nnic	protein_coding	134548942,134562009,134564598,134568158,134569413,134575420,134575821,134576349,134576963,134577704,134579507	134549249,134562211,134565546,134568325,134569529,134575542,134575927,134576430,134577046,134577786,134579875	Gene ID= ENSG00000227471.8 TPM= 3.86 Transcript Type= NA
chr7	134549015	134579875	134549015	134579875	+	transcript4480.chr7.nnic@AKR1B15	transcript4480.chr7.nnic	protein_coding	134549015,134564598,134568158,134569413,134571604,134575420,134575821,134576349,134576963,134577704,134579507	134549249,134564769,134568325,134569529,134571681,134575542,134575927,134576430,134577046,134577786,134579875	Gene ID= ENSG00000227471.8 TPM= 2.9 Transcript Type= NA
chr7	134548943	134579875	134548943	134579875	+	transcript4482.chr7.nnic@AKR1B15	transcript4482.chr7.nnic	protein_coding	134548943,134564598,134568158,134569413,134571604,134575420,134575821,134576349,134576963,134577704,134579507	134549249,134565546,134568325,134569529,134571681,134575542,134575927,134576430,134577046,134577786,134579875	Gene ID= ENSG00000227471.8 TPM= 6.76 Transcript Type= NA
chr7	134548940	134579875	134548940	134579875	+	transcript4488.chr7.nnic@AKR1B15	transcript4488.chr7.nnic	protein_coding	134548940,134568158,134569413,134571604,134575420,134575821,134576349,134576963,134577704,134579507	134549249,134568325,134569529,134571681,134575542,134575927,134576430,134577046,134577786,134579875	Gene ID= ENSG00000227471.8 TPM= 15.44 Transcript Type= NA
chr7	134549110	134579875	134549110	134579875	+	transcript4492.chr7.nnic@AKR1B15	transcript4492.chr7.nnic	protein_coding	134549110,134564598,134568158,134569413,134575420,134575821,134576349,134576963,134577704,134579507	134549249,134565546,134568325,134569529,134575542,134575927,134576430,134577046,134577786,134579875	Gene ID= ENSG00000227471.8 TPM= 2.9 Transcript Type= NA
chr7	134548940	134579875	134548940	134579875	+	transcript4493.chr7.nnic@AKR1B15	transcript4493.chr7.nnic	protein_coding	134548940,134568158,134569413,134575420,134575821,134576349,134576963,134577704,134579507	134549249,134568325,134569529,134575542,134575927,134576430,134577046,134577786,134579875	Gene ID= ENSG00000227471.8 TPM= 3.86 Transcript Type= NA
chr7	134549015	134572652	134549015	134572652	+	transcript4500.chr7.nnic@AKR1B15	transcript4500.chr7.nnic	protein_coding	134549015,134568158,134569413,134571604	134549249,134568325,134569529,134572652	Gene ID= ENSG00000227471.8 TPM= 3.86 Transcript Type= NA
chr7	134549114	134570474	134549114	134570474	+	transcript4503.chr7.nnic@AKR1B15	transcript4503.chr7.nnic	protein_coding	134549114,134564598,134568158,134569413	134549249,134565546,134568325,134570474	Gene ID= ENSG00000227471.8 TPM= 2.9 Transcript Type= NA
chr7	134556406	134557853	134556406	134557853	+	transcript4509.chr7.nnic@NA	transcript4509.chr7.nnic	NA	134556406	134557853	Gene ID= novel_gene_chr7_4510 TPM= 1.93 Transcript Type= NA
chr7	134646831	134679813	134646831	134679813	+	ENST00000393132.2@BPGM	ENST00000393132.2	protein_coding	134646831,134658348,134661447,134678853	134646937,134658668,134662108,134679813	Gene ID= ENSG00000172331.11 TPM= 2.9 Transcript Type= protein_coding
chr7	134646803	134663105	134646803	134663105	+	transcript4515.chr7.nic@BPGM	transcript4515.chr7.nic	protein_coding	134646803,134661447	134646937,134663105	Gene ID= ENSG00000172331.11 TPM= 6.76 Transcript Type= NA
chr7	134646808	134679813	134646808	134679813	+	ENST00000344924.7@BPGM	ENST00000344924.7	protein_coding	134646808,134661447,134678853	134646937,134662108,134679813	Gene ID= ENSG00000172331.11 TPM= 10.62 Transcript Type= protein_coding
chr7	134779633	134970641	134779633	134970641	+	transcript4518.chr7.nic@CALD1	transcript4518.chr7.nic	protein_coding	134779633,134843884,134867693,134928754,134932988,134935688,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968340	134779749,134843971,134867804,134928900,134933390,134935765,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134970641	Gene ID= ENSG00000122786.19 TPM= 2.9 Transcript Type= NA
chr7	134891400	134970728	134891400	134970728	+	ENST00000393118.6@CALD1	ENST00000393118.6	protein_coding	134891400,134928754,134932988,134935688,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968340	134891673,134928900,134933390,134935765,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134970728	Gene ID= ENSG00000122786.19 TPM= 1.93 Transcript Type= protein_coding
chr7	134779678	134970641	134779678	134970641	+	ENST00000361901.6@CALD1	ENST00000361901.6	protein_coding	134779678,134843884,134867693,134928754,134932988,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968340	134779749,134843971,134867804,134928900,134933390,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134970641	Gene ID= ENSG00000122786.19 TPM= 10.14 Transcript Type= protein_coding
chr7	134891610	134968859	134891610	134968859	+	ENST00000424922.5@CALD1	ENST00000424922.5	protein_coding	134891610,134928754,134932988,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968340	134891673,134928900,134933390,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134968859	Gene ID= ENSG00000122786.19 TPM= 1.45 Transcript Type= protein_coding
chr7	134986516	134989685	134986516	134989685	+	transcript4537.chr7.nnic@NA	transcript4537.chr7.nnic	NA	134986516	134989685	Gene ID= novel_gene_chr7_4538 TPM= 2.9 Transcript Type= NA
chr7	135165785	135170826	135165785	135170826	-	transcript4544.chr7.nic@C7orf49	transcript4544.chr7.nic	protein_coding	135170652,135168749,135167732,135165785	135170826,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 16 Transcript Type= NA
chr7	135165785	135170743	135165785	135170743	-	transcript4545.chr7.nic@C7orf49	transcript4545.chr7.nic	protein_coding	135170399,135168786,135167732,135165785	135170743,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 2.48 Transcript Type= NA
chr7	135165785	135170743	135165785	135170743	-	transcript4548.chr7.nic@C7orf49	transcript4548.chr7.nic	protein_coding	135170399,135168969,135167732,135165785	135170743,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 3.45 Transcript Type= NA
chr7	135165829	135170795	135165829	135170795	-	ENST00000430372.1@C7orf49	ENST00000430372.1	protein_coding	135170652,135168745,135167732,135165829	135170795,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 15.61 Transcript Type= protein_coding
chr7	135165785	135170661	135165785	135170661	-	ENST00000424142.5@C7orf49	ENST00000424142.5	protein_coding	135170399,135168749,135167732,135165785	135170661,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 9.24 Transcript Type= protein_coding
chr7	135165785	135170695	135165785	135170695	-	ENST00000393114.7@C7orf49	ENST00000393114.7	protein_coding	135170652,135168786,135167732,135165785	135170695,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 2.48 Transcript Type= protein_coding
chr7	135148072	135166215	135148072	135166215	+	ENST00000275767.3@TMEM140	ENST00000275767.3	protein_coding	135148072,135164418	135148270,135166215	Gene ID= ENSG00000146859.6 TPM= 16.41 Transcript Type= protein_coding
chr7	135162464	135166061	135162464	135166061	-	transcript4579.chr7.nnic@NA	transcript4579.chr7.nnic	NA	135162464	135166061	Gene ID= novel_gene_chr7_4580 TPM= 1.93 Transcript Type= NA
chr7	135169345	135171697	135169345	135171697	+	transcript4567.chr7.nnic@NA	transcript4567.chr7.nnic	NA	135169345	135171697	Gene ID= novel_gene_chr7_4568 TPM= 13.51 Transcript Type= NA
chr7	135170292	135173210	135170292	135173210	+	transcript4571.chr7.nnic@NA	transcript4571.chr7.nnic	NA	135170292	135173210	Gene ID= novel_gene_chr7_4572 TPM= 5.79 Transcript Type= NA
chr7	135174903	135181959	135174903	135181959	+	transcript4581.chr7.nnic@NA	transcript4581.chr7.nnic	NA	135174903	135181959	Gene ID= novel_gene_chr7_4582 TPM= 4.83 Transcript Type= NA
chr7	135185782	135211534	135185782	135211534	-	ENST00000466182.5@WDR91	ENST00000466182.5	protein_coding	135211380,135209576,135208791,135207120,135205928,135204268,135197044,135196144,135194934,135193578,135193231,135189344,135188433,135186972,135185782	135211534,135209755,135208998,135207202,135206058,135204433,135198151,135196337,135195084,135193672,135193399,135189452,135188545,135187169,135186315	Gene ID= ENSG00000105875.13 TPM= 1.93 Transcript Type= retained_intron
chr7	135408908	135510118	135408908	135510118	-	transcript4591.chr7.nic@CNOT4	transcript4591.chr7.nic	protein_coding	135509889,135438158,135422156,135415176,135414331,135413488,135408908	135510118,135438423,135422353,135415262,135414432,135413613,135410648	Gene ID= ENSG00000080802.18 TPM= 1.93 Transcript Type= NA
chr7	135557919	135648757	135557919	135648757	+	ENST00000285968.10@NUP205	ENST00000285968.10	protein_coding	135557919,135571105,135573654,135576270,135576969,135577796,135578751,135584832,135587575,135587855,135591450,135592987,135594547,135597368,135597998,135600870,135601370,135602805,135604340,135606145,135606751,135607247,135614159,135615916,135616655,135617090,135617602,135618412,135619423,135619790,135622777,135625164,135626240,135627973,135630344,135635581,135637931,135638557,135643192,135644895,135645468,135646158,135648404	135557972,135571247,135573825,135576414,135577128,135578024,135578915,135585007,135587691,135587992,135591600,135593192,135594729,135597418,135598207,135600969,135601507,135602994,135604460,135606226,135606915,135607371,135614273,135616065,135616726,135617247,135617682,135618603,135619690,135619888,135622925,135625355,135626361,135628111,135630470,135635657,135638059,135638683,135643358,135645018,135645596,135646231,135648757	Gene ID= ENSG00000155561.14 TPM= 7.72 Transcript Type= protein_coding
chr7	135662521	135676412	135662521	135676412	+	ENST00000507606.2@C7orf73	ENST00000507606.2	protein_coding	135662521,135672753,135674091	135662594,135672806,135676412	Gene ID= ENSG00000243317.7 TPM= 8.69 Transcript Type= protein_coding
chr7	135926761	135977316	135926761	135977316	-	ENST00000393085.3@MTPN	ENST00000393085.3	protein_coding	135977029,135951517,135950599,135926761	135977316,135951630,135950682,135930012	Gene ID= ENSG00000105887.10 TPM= 4.83 Transcript Type= protein_coding
chr7	138460334	138589993	138460334	138589993	+	ENST00000343526.8@TRIM24	ENST00000343526.8	protein_coding	138460334,138504290,138515212,138519189,138525241,138529116,138538657,138551063,138554698,138567481,138570830,138573507,138576373,138577420,138579204,138580562,138581697,138583850,138584742	138460912,138504408,138515359,138519321,138525357,138529230,138538803,138551180,138554966,138567654,138571003,138573642,138576445,138577588,138579532,138580694,138581771,138583999,138589993	Gene ID= ENSG00000122779.17 TPM= 6.76 Transcript Type= protein_coding
chr7	139023857	139025461	139023857	139025461	+	transcript4618.chr7.nnic@NA	transcript4618.chr7.nnic	NA	139023857	139025461	Gene ID= novel_gene_chr7_4619 TPM= 1.93 Transcript Type= NA
chr7	139231190	139261290	139231190	139261290	+	transcript4623.chr7.nic@UBN2	transcript4623.chr7.nic	protein_coding	139231190,139237005,139251956,139258488,139259267,139261252	139231952,139237097,139252057,139258625,139259370,139261290	Gene ID= ENSG00000157741.14 TPM= 1.93 Transcript Type= NA
chr7	139340450	139345790	139340450	139345790	+	ENST00000481123.1@FMC1	ENST00000481123.1	protein_coding	139340450,139345501	139340619,139345790	Gene ID= ENSG00000164898.12 TPM= 2.9 Transcript Type= processed_transcript
chr7	139341132	139346319	139341132	139346319	+	ENST00000297534.6@FMC1	ENST00000297534.6	protein_coding	139341132,139345501	139341522,139346319	Gene ID= ENSG00000164898.12 TPM= 52.13 Transcript Type= protein_coding
chr7	139359908	139423452	139359908	139423452	+	ENST00000354926.8@LUC7L2	ENST00000354926.8	protein_coding	139359908,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538,139422163	139360322,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139417729,139423452	Gene ID= ENSG00000146963.17 TPM= 40.86 Transcript Type= protein_coding
chr7	139359029	139360354	139359029	139360354	-	transcript4671.chr7.nnic@NA	transcript4671.chr7.nnic	NA	139359029	139360354	Gene ID= novel_gene_chr7_4672 TPM= 9.97 Transcript Type= NA
chr7	139561570	139777718	139561570	139777718	-	ENST00000406875.7@HIPK2	ENST00000406875.7	protein_coding	139777605,139715932,139631602,139631165,139628953,139626601,139620401,139614286,139613202,139604081,139600417,139596717,139583817,139575128,139561570	139777718,139717015,139631725,139631284,139629039,139626785,139620563,139614493,139613323,139604223,139600596,139596998,139584064,139575288,139573397	Gene ID= ENSG00000064393.15 TPM= 135.63 Transcript Type= protein_coding
chr7	139572629	139777778	139572629	139777778	-	ENST00000428878.6@HIPK2	ENST00000428878.6	protein_coding	139777605,139715932,139631602,139631165,139628953,139626601,139620401,139614286,139613202,139604081,139600417,139596717,139583817,139575128,139572629	139777778,139717015,139631725,139631284,139629039,139626785,139620563,139614412,139613323,139604223,139600596,139596998,139584064,139575288,139573397	Gene ID= ENSG00000064393.15 TPM= 32.34 Transcript Type= protein_coding
chr7	139581869	139582767	139581869	139582767	-	transcript4687.chr7.nnic@NA	transcript4687.chr7.nnic	NA	139581869	139582767	Gene ID= novel_gene_chr7_4688 TPM= 1.93 Transcript Type= NA
chr7	139710070	139712494	139710070	139712494	-	transcript4689.chr7.nnic@NA	transcript4689.chr7.nnic	NA	139710070	139712494	Gene ID= novel_gene_chr7_4690 TPM= 1.93 Transcript Type= NA
chr7	139776419	139778030	139776419	139778030	-	transcript4683.chr7.nnic@NA	transcript4683.chr7.nnic	NA	139776419	139778030	Gene ID= novel_gene_chr7_4684 TPM= 3.86 Transcript Type= NA
chr7	139829224	140020293	139829224	140020293	+	ENST00000448866.5@TBXAS1	ENST00000448866.5	protein_coding	139829224,139872235,139875585,139911225,139936191,139953368,139955459,139957634,139961919,140007091,140015723,140017671,140020025	139829479,139872328,139875637,139911321,139936307,139953456,139955607,139957764,139962233,140007182,140015860,140017833,140020293	Gene ID= ENSG00000059377.16 TPM= 2.9 Transcript Type= protein_coding
chr7	140023744	140063721	140023744	140063721	-	ENST00000263549.7@PARP12	ENST00000263549.7	protein_coding	140062522,140057899,140056856,140054662,140046884,140041644,140037715,140034235,140028613,140027276,140026197,140023744	140063721,140058034,140057153,140054763,140047007,140041839,140037856,140034331,140028688,140027406,140026348,140024885	Gene ID= ENSG00000059378.12 TPM= 12.55 Transcript Type= protein_coding
chr7	140084746	140177035	140084746	140177035	-	ENST00000397560.6@KDM7A	ENST00000397560.6	protein_coding	140176744,140139105,140133539,140129493,140127442,140126637,140124621,140120442,140119113,140113491,140111095,140101951,140099899,140098879,140097545,140096899,140096555,140094056,140091804,140084746	140177035,140139190,140133656,140129653,140127583,140126823,140124783,140120529,140119219,140113582,140111184,140102160,140100023,140099033,140097642,140097047,140096763,140094138,140092077,140091188	Gene ID= ENSG00000006459.10 TPM= 14.48 Transcript Type= protein_coding
chr7	140177261	140179640	140177261	140179640	+	ENST00000566699.1@JHDM1D-AS1	ENST00000566699.1	antisense_RNA	140177261	140179640	Gene ID= ENSG00000260231.1 TPM= 7.72 Transcript Type= antisense_RNA
chr7	140333752	140398549	140333752	140398549	-	ENST00000326232.13@SLC37A3	ENST00000326232.13	protein_coding	140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333752	140398549,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140345970,140345263,140343563,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 11.9 Transcript Type= protein_coding
chr7	140333752	140398514	140333752	140398514	-	transcript4711.chr7.nic@SLC37A3	transcript4711.chr7.nic	protein_coding	140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333752	140398514,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351969,140348767,140345970,140345263,140343563,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 2.25 Transcript Type= NA
chr7	140333752	140398457	140333752	140398457	-	ENST00000340308.7@SLC37A3	ENST00000340308.7	protein_coding	140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140337284,140333752	140398457,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 1.28 Transcript Type= protein_coding
chr7	140453047	140479360	140453047	140479360	-	transcript4718.chr7.nic@MKRN1	transcript4718.chr7.nic	protein_coding	140479160,140474381,140471883,140459707,140459007,140456652,140455790,140455095,140453047	140479360,140474489,140472011,140459936,140459233,140456866,140455900,140455233,140454729	Gene ID= ENSG00000133606.10 TPM= 5.55 Transcript Type= NA
chr7	140453040	140479569	140453040	140479569	-	ENST00000255977.6@MKRN1	ENST00000255977.6	protein_coding	140479160,140471883,140459707,140459007,140456652,140455790,140455095,140453040	140479569,140472011,140459936,140459233,140456866,140455900,140455233,140454729	Gene ID= ENSG00000133606.10 TPM= 116.56 Transcript Type= protein_coding
chr7	140453047	140479336	140453047	140479336	-	ENST00000475010.5@MKRN1	ENST00000475010.5	protein_coding	140479160,140471883,140459707,140459007,140456652,140455095,140453047	140479336,140472011,140459936,140459233,140456866,140455900,140454729	Gene ID= ENSG00000133606.10 TPM= 2.65 Transcript Type= retained_intron
chr7	140456192	140479499	140456192	140479499	-	ENST00000443720.6@MKRN1	ENST00000443720.6	protein_coding	140479160,140471883,140459707,140459007,140456192	140479499,140472011,140459936,140459233,140456866	Gene ID= ENSG00000133606.10 TPM= 90.74 Transcript Type= protein_coding
chr7	140518420	140640776	140518420	140640776	-	ENST00000275884.10@DENND2A	ENST00000275884.10	protein_coding	140640504,140601403,140587653,140585589,140573808,140569645,140568763,140567086,140559708,140558143,140555636,140546799,140544618,140527318,140525751,140523307,140521855,140519632,140518420	140640776,140602542,140587780,140585710,140574008,140569738,140568813,140567273,140559817,140558212,140555713,140546939,140544766,140527495,140525792,140523424,140522100,140519718,140518738	Gene ID= ENSG00000146966.12 TPM= 7.72 Transcript Type= protein_coding
chr7	140672910	140695121	140672910	140695121	+	transcript4741.chr7.nnic@ADCK2	transcript4741.chr7.nnic	protein_coding	140672910,140674611,140679155,140681042,140689597,140690760,140694663	140674263,140674757,140679283,140681137,140689725,140690813,140695121	Gene ID= ENSG00000133597.10 TPM= 3.86 Transcript Type= NA
chr7	140673153	140695121	140673153	140695121	+	ENST00000072869.8@ADCK2	ENST00000072869.8	protein_coding	140673153,140674611,140679155,140681042,140686990,140689597,140690760,140694663	140674263,140674757,140679283,140681137,140687241,140689725,140690813,140695121	Gene ID= ENSG00000133597.10 TPM= 24.13 Transcript Type= protein_coding
chr7	140696672	140706646	140696672	140706646	+	ENST00000247866.8@NDUFB2	ENST00000247866.8	protein_coding	140696672,140702866,140704860,140706563	140696842,140703010,140704963,140706646	Gene ID= ENSG00000090266.12 TPM= 453.7 Transcript Type= protein_coding
chr7	140697224	140706644	140697224	140706644	+	ENST00000471136.5@NDUFB2	ENST00000471136.5	protein_coding	140697224,140702866,140704860,140706563	140697391,140703010,140704963,140706644	Gene ID= ENSG00000090266.12 TPM= 5.79 Transcript Type= protein_coding
chr7	140725139	140924912	140725139	140924912	-	transcript4751.chr7.nnic@BRAF	transcript4751.chr7.nnic	protein_coding	140924566,140850111,140834609,140808892,140807960,140801412,140800362,140794308,140787548,140785689,140783021,140781576,140777991,140776912,140754187,140753275,140749287,140739812,140734617,140725139	140924912,140850212,140834872,140808995,140808062,140801560,140800481,140794467,140787584,140785808,140783157,140781693,140778075,140777088,140754233,140753393,140749418,140739946,140734770,140726516	Gene ID= ENSG00000157764.12 TPM= 2.41 Transcript Type= NA
chr7	140725139	140924912	140725139	140924912	-	transcript4752.chr7.nic@BRAF	transcript4752.chr7.nic	protein_coding	140924566,140850111,140834609,140808892,140807960,140801412,140800362,140794308,140787548,140783021,140781576,140777991,140776912,140754187,140753275,140749287,140739812,140734617,140725139	140924912,140850212,140834872,140808995,140808062,140801560,140800481,140794467,140787584,140783157,140781693,140778075,140777088,140754233,140753393,140749418,140739946,140734770,140726516	Gene ID= ENSG00000157764.12 TPM= 2.41 Transcript Type= NA
chr7	141006169	141014966	141006169	141014966	-	ENST00000467334.1@MRPS33	ENST00000467334.1	protein_coding	141014911,141010419,141006169	141014966,141010617,141006535	Gene ID= ENSG00000090263.15 TPM= 13.51 Transcript Type= protein_coding
chr7	141002610	141014983	141002610	141014983	-	ENST00000324787.9@MRPS33	ENST00000324787.9	protein_coding	141014911,141010419,141002610	141014983,141010660,141006535	Gene ID= ENSG00000090263.15 TPM= 42.47 Transcript Type= protein_coding
chr7	141006168	141014962	141006168	141014962	-	transcript4759.chr7.nnic@MRPS33	transcript4759.chr7.nnic	protein_coding	141014911,141006168	141014962,141006535	Gene ID= ENSG00000090263.15 TPM= 5.79 Transcript Type= NA
chr7	141551397	141650593	141551397	141650593	+	transcript4764.chr7.nnic@AGK	transcript4764.chr7.nnic	protein_coding	141551397,141555453,141593146,141596562,141601205,141611195,141614146,141615471,141621732,141633901,141636960,141641248,141641811,141649263,141650473	141551434,141555567,141593185,141596641,141601280,141611287,141614178,141615565,141621801,141633980,141637017,141641398,141641908,141649333,141650593	Gene ID= ENSG00000006530.15 TPM= 2.9 Transcript Type= NA
chr7	141652381	141702179	141652381	141702179	-	transcript4766.chr7.nnic@KIAA1147	transcript4766.chr7.nnic	protein_coding	141701886,141686559,141685478,141674067,141666287,141665187,141664904,141664172,141656544,141652381	141702179,141686658,141685636,141674220,141666425,141665318,141665054,141664240,141656614,141652883	Gene ID= ENSG00000257093.6 TPM= 1.93 Transcript Type= NA
chr7	141656728	141702153	141656728	141702153	-	ENST00000536163.5@KIAA1147	ENST00000536163.5	protein_coding	141701886,141686559,141685478,141674067,141666287,141665187,141664904,141664172,141656728	141702153,141686658,141685636,141674220,141666425,141665318,141665054,141664240,141662851	Gene ID= ENSG00000257093.6 TPM= 4.83 Transcript Type= protein_coding
chr7	141738321	141750461	141738321	141750461	+	ENST00000265304.10@SSBP1	ENST00000265304.10	protein_coding	141738321,141739124,141742169,141743561,141743902,141745496,141750311	141738410,141739190,141742229,141743701,141743989,141745584,141750461	Gene ID= ENSG00000106028.10 TPM= 63.71 Transcript Type= protein_coding
chr7	141738334	141750488	141738334	141750488	+	ENST00000612337.4@SSBP1	ENST00000612337.4	protein_coding	141738334,141739124,141742169,141743561,141743902,141745496,141750311	141738593,141739190,141742229,141743701,141743989,141745584,141750488	Gene ID= ENSG00000106028.10 TPM= 12.55 Transcript Type= protein_coding
chr7	143263443	143269129	143263443	143269129	+	ENST00000358406.9@GSTK1	ENST00000358406.9	protein_coding	143263443,143264086,143264548,143264992,143265261,143267617,143268091,143268788	143263585,143264167,143264676,143265092,143265296,143267733,143268184,143269129	Gene ID= ENSG00000197448.13 TPM= 52.13 Transcript Type= protein_coding
chr7	143263456	143269115	143263456	143269115	+	ENST00000479303.1@GSTK1	ENST00000479303.1	protein_coding	143263456,143264086,143264548,143264992,143267617,143268091,143268788	143263585,143264167,143264676,143265296,143267733,143268184,143269115	Gene ID= ENSG00000197448.13 TPM= 6.76 Transcript Type= protein_coding
chr7	143288215	143307696	143288215	143307696	+	ENST00000310447.9@CASP2	ENST00000310447.9	protein_coding	143288215,143291540,143292300,143292617,143294230,143294597,143299923,143300204,143303784,143304674,143304940	143288529,143291690,143292467,143292698,143294324,143294773,143300051,143300294,143303933,143304783,143307696	Gene ID= ENSG00000106144.19 TPM= 8.69 Transcript Type= protein_coding
chr7	143379685	143380965	143379685	143380965	-	transcript4798.chr7.nnic@NA	transcript4798.chr7.nnic	NA	143379685	143380965	Gene ID= novel_gene_chr7_4799 TPM= 10.62 Transcript Type= NA
chr7	143381336	143391111	143381336	143391111	+	transcript4805.chr7.nic@ZYX	transcript4805.chr7.nic	protein_coding	143381336,143381557,143382248,143382801,143388219,143388489,143388767,143389857,143390578	143381409,143381779,143382447,143383322,143388339,143388658,143388945,143389977,143391111	Gene ID= ENSG00000159840.15 TPM= 16.41 Transcript Type= NA
chr7	143381320	143391111	143381320	143391111	+	transcript4807.chr7.nic@ZYX	transcript4807.chr7.nic	protein_coding	143381320,143382248,143382593,143382801,143388219,143388489,143388767,143389857,143390578	143381779,143382447,143382685,143383322,143388339,143388658,143388945,143389977,143391111	Gene ID= ENSG00000159840.15 TPM= 23.65 Transcript Type= NA
chr7	143381080	143391111	143381080	143391111	+	ENST00000322764.9@ZYX	ENST00000322764.9	protein_coding	143381080,143381557,143382248,143382593,143382801,143388219,143388489,143388767,143389857,143390578	143381409,143381779,143382447,143382685,143383322,143388339,143388658,143388945,143389977,143391111	Gene ID= ENSG00000159840.15 TPM= 89.29 Transcript Type= protein_coding
chr7	143852967	143882841	143852967	143882841	-	transcript4815.chr7.nic@TCAF1	transcript4815.chr7.nic	protein_coding	143882736,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143852967	143882841,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142	Gene ID= ENSG00000198420.9 TPM= 6.44 Transcript Type= NA
chr7	143851375	143902155	143851375	143902155	-	ENST00000479870.5@TCAF1	ENST00000479870.5	protein_coding	143901961,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143851375	143902155,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142	Gene ID= ENSG00000198420.9 TPM= 7.4 Transcript Type= protein_coding
chr7	143852967	143902176	143852967	143902176	-	transcript4817.chr7.nic@TCAF1	transcript4817.chr7.nic	protein_coding	143902027,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143852967	143902176,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142	Gene ID= ENSG00000198420.9 TPM= 6.44 Transcript Type= NA
chr7	144451941	144836053	144451941	144836053	-	ENST00000360057.7@TPK1	ENST00000360057.7	protein_coding	144835967,144835560,144765880,144682909,144648807,144623166,144591423,144548491,144451941	144836053,144835618,144765951,144682978,144648879,144623261,144591569,144548602,144453663	Gene ID= ENSG00000196511.14 TPM= 2.9 Transcript Type= protein_coding
chr7	148698755	148731568	148698755	148731568	+	transcript4848.chr7.nic@CUL1	transcript4848.chr7.nic	protein_coding	148698755,148729962	148699029,148731568	Gene ID= ENSG00000055130.15 TPM= 8.69 Transcript Type= NA
chr7	148698645	148801025	148698645	148801025	+	ENST00000602748.5@CUL1	ENST00000602748.5	protein_coding	148698645,148729962,148753976,148756983,148759304,148759548,148760333,148766561,148767619,148783783,148783971,148786551,148786989,148788557,148789750,148790310,148792726,148797812,148797937,148798572,148799275,148800502	148698763,148730262,148754150,148757150,148759354,148759638,148760496,148766723,148767749,148783890,148784077,148786599,148787120,148788674,148789826,148790441,148792818,148797859,148798019,148798677,148799388,148801025	Gene ID= ENSG00000055130.15 TPM= 12.87 Transcript Type= protein_coding
chr7	148698912	148801036	148698912	148801036	+	ENST00000325222.8@CUL1	ENST00000325222.8	protein_coding	148698912,148729962,148753976,148756983,148759304,148759548,148760333,148766561,148767619,148783783,148783971,148786551,148786989,148788557,148789750,148790310,148792726,148797812,148797937,148798572,148799275,148800502	148699029,148730262,148754150,148757150,148759354,148759638,148760496,148766723,148767749,148783890,148784077,148786599,148787120,148788674,148789826,148790441,148792818,148797859,148798019,148798677,148799388,148801036	Gene ID= ENSG00000055130.15 TPM= 148.98 Transcript Type= protein_coding
chr7	148963315	148963410	148963315	148963410	+	ENST00000516507.1@RNY4	ENST00000516507.1	misc_RNA	148963315	148963410	Gene ID= ENSG00000252316.1 TPM= 6.76 Transcript Type= misc_RNA
chr7	148983755	148983856	148983755	148983856	+	ENST00000365484.1@RNY3	ENST00000365484.1	misc_RNA	148983755	148983856	Gene ID= ENSG00000202354.1 TPM= 2.9 Transcript Type= misc_RNA
chr7	148987136	148987248	148987136	148987248	-	ENST00000364228.1@RNY1	ENST00000364228.1	misc_RNA	148987136	148987248	Gene ID= ENSG00000201098.1 TPM= 6.76 Transcript Type= misc_RNA
chr7	149003062	149028641	149003062	149028641	-	ENST00000286091.8@PDIA4	ENST00000286091.8	protein_coding	149028321,149020967,149018992,149014904,149012155,149011846,149008159,149005897,149005141,149003062	149028641,149021147,149019197,149015042,149012360,149012004,149008310,149006053,149005374,149004209	Gene ID= ENSG00000155660.10 TPM= 7.72 Transcript Type= protein_coding
chr7	149069643	149090782	149069643	149090782	-	ENST00000316286.13@ZNF786	ENST00000316286.13	protein_coding	149090623,149074386,149069643	149090782,149074538,149072473	Gene ID= ENSG00000197362.14 TPM= 5.79 Transcript Type= protein_coding
chr7	149069963	149090705	149069963	149090705	-	ENST00000491431.1@ZNF786	ENST00000491431.1	protein_coding	149090623,149080591,149074386,149069963	149090705,149080717,149074538,149072473	Gene ID= ENSG00000197362.14 TPM= 6.76 Transcript Type= protein_coding
chr7	149102784	149126346	149102784	149126346	-	ENST00000378061.6@ZNF425	ENST00000378061.6	protein_coding	149126196,149118222,149112137,149102784	149126346,149118348,149112295,149105566	Gene ID= ENSG00000204947.8 TPM= 7.72 Transcript Type= protein_coding
chr7	149125658	149126302	149125658	149126302	-	transcript4867.chr7.nnic@NA	transcript4867.chr7.nnic	NA	149125658	149126302	Gene ID= novel_gene_chr7_4868 TPM= 1.93 Transcript Type= NA
chr7	149195485	149226248	149195485	149226248	+	ENST00000610704.4@ZNF282	ENST00000610704.4	protein_coding	149195485,149198333,149206696,149207351,149210585,149212358,149213701,149223812	149195754,149198752,149206822,149207470,149210704,149212471,149213814,149226248	Gene ID= ENSG00000170265.11 TPM= 11.58 Transcript Type= protein_coding
chr7	149261996	149297301	149261996	149297301	+	transcript4881.chr7.nnic@ZNF783	transcript4881.chr7.nnic	protein_coding	149261996,149266335,149266819,149267097,149278399,149287565,149289938,149292211,149293377,149294380,149294540,149297051	149262357,149266730,149266945,149267222,149278527,149287776,149290038,149292308,149293492,149294412,149295183,149297301	Gene ID= ENSG00000204946.9 TPM= 2.9 Transcript Type= NA
chr7	149262171	149284991	149262171	149284991	+	ENST00000434415.5@ZNF783	ENST00000434415.5	protein_coding	149262171,149266335,149266819,149267097,149278399,149281505	149262357,149266730,149266945,149267222,149278527,149284991	Gene ID= ENSG00000204946.9 TPM= 14.48 Transcript Type= protein_coding
chr7	149282959	149287338	149282959	149287338	-	transcript4894.chr7.nnic@NA	transcript4894.chr7.nnic	NA	149282959	149287338	Gene ID= novel_gene_chr7_4895 TPM= 2.9 Transcript Type= NA
chr7	149294089	149297302	149294089	149297302	+	ENST00000480864.1@AC004890.2	ENST00000480864.1	transcribed_unprocessed_pseudogene	149294089,149294540,149297051	149294412,149295183,149297302	Gene ID= ENSG00000244560.6 TPM= 3.86 Transcript Type= processed_transcript
chr7	149431363	149460602	149431363	149460602	-	transcript4897.chr7.nnic@ZNF777	transcript4897.chr7.nnic	protein_coding	149460030,149455177,149454111,149450999,149436575,149431363	149460602,149456037,149454237,149451112,149436826,149432932	Gene ID= ENSG00000196453.7 TPM= 27.03 Transcript Type= NA
chr7	149460116	149461417	149460116	149461417	+	transcript4900.chr7.nnic@NA	transcript4900.chr7.nnic	NA	149460116	149461417	Gene ID= novel_gene_chr7_4901 TPM= 1.93 Transcript Type= NA
chr7	149472794	149497817	149472794	149497817	-	ENST00000340622.7@ZNF746	ENST00000340622.7	protein_coding	149497513,149494204,149493989,149492859,149477564,149476922,149472794	149497817,149494503,149494070,149492972,149477755,149477047,149475480	Gene ID= ENSG00000181220.15 TPM= 3.38 Transcript Type= protein_coding
chr7	149472794	149497755	149472794	149497755	-	transcript4903.chr7.nnic@ZNF746	transcript4903.chr7.nnic	protein_coding	149497513,149494204,149493989,149492859,149477564,149476922,149472794	149497755,149494503,149494115,149492972,149477755,149477047,149475480	Gene ID= ENSG00000181220.15 TPM= 7.24 Transcript Type= NA
chr7	149472796	149497807	149472796	149497807	-	ENST00000458143.6@ZNF746	ENST00000458143.6	protein_coding	149497513,149494204,149493989,149492859,149477564,149476922,149472796	149497807,149494503,149494070,149492972,149477755,149477047,149475483	Gene ID= ENSG00000181220.15 TPM= 7.24 Transcript Type= protein_coding
chr7	149764182	149765694	149764182	149765694	-	transcript4912.chr7.nnic@NA	transcript4912.chr7.nnic	NA	149764182	149765694	Gene ID= novel_gene_chr7_4913 TPM= 3.86 Transcript Type= NA
chr7	150338319	150341674	150338319	150341674	-	ENST00000223271.7@RARRES2	ENST00000223271.7	protein_coding	150341578,150340436,150340100,150338986,150338615,150338319	150341674,150340629,150340204,150339081,150338741,150338439	Gene ID= ENSG00000106538.9 TPM= 7.72 Transcript Type= protein_coding
chr7	150368798	150374036	150368798	150374036	+	transcript4936.chr7.nnic@REPIN1	transcript4936.chr7.nnic	protein_coding	150368798,150369671,150371231	150368941,150369697,150374036	Gene ID= ENSG00000214022.11 TPM= 40.06 Transcript Type= NA
chr7	150368494	150374039	150368494	150374039	+	transcript4938.chr7.nic@REPIN1	transcript4938.chr7.nic	protein_coding	150368494,150369671,150371231	150368941,150369868,150374039	Gene ID= ENSG00000214022.11 TPM= 56.95 Transcript Type= NA
chr7	150368787	150374039	150368787	150374039	+	transcript4940.chr7.nic@REPIN1	transcript4940.chr7.nic	protein_coding	150368787,150369671,150371231	150369013,150369868,150374039	Gene ID= ENSG00000214022.11 TPM= 43.44 Transcript Type= NA
chr7	150369094	150374035	150369094	150374035	+	transcript4951.chr7.nic@REPIN1	transcript4951.chr7.nic	protein_coding	150369094,150371228	150369868,150374035	Gene ID= ENSG00000214022.11 TPM= 43.92 Transcript Type= NA
chr7	150371164	150374039	150371164	150374039	+	ENST00000425389.2@REPIN1	ENST00000425389.2	protein_coding	150371164	150374039	Gene ID= ENSG00000214022.11 TPM= 38.13 Transcript Type= protein_coding
chr7	150368829	150374045	150368829	150374045	+	transcript4949.chr7.nnic@AC073111.3	transcript4949.chr7.nnic	protein_coding	150368829,150371231	150369013,150374045	Gene ID= ENSG00000284041.1 TPM= 39.1 Transcript Type= NA
chr7	150379335	150398631	150379335	150398631	+	ENST00000329630.9@ZNF775	ENST00000329630.9	protein_coding	150379335,150388422,150396513	150379392,150388501,150398631	Gene ID= ENSG00000196456.11 TPM= 14.48 Transcript Type= protein_coding
chr7	150405324	150410959	150405324	150410959	+	transcript4954.chr7.nnic@AC073111.5	transcript4954.chr7.nnic	protein_coding	150405324,150407584,150408642,150410160	150405441,150408488,150408784,150410959	Gene ID= ENSG00000284691.1 TPM= 1.93 Transcript Type= NA
chr7	150450630	150479392	150450630	150479392	+	ENST00000307271.3@GIMAP8	ENST00000307271.3	protein_coding	150450630,150466671,150470829,150474012,150477092	150451175,150467334,150470874,150474638,150479392	Gene ID= ENSG00000171115.3 TPM= 12.55 Transcript Type= protein_coding
chr7	150514830	150521073	150514830	150521073	+	ENST00000313543.4@GIMAP7	ENST00000313543.4	protein_coding	150514830,150519934	150514945,150521073	Gene ID= ENSG00000179144.4 TPM= 2.9 Transcript Type= protein_coding
chr7	150567277	150573955	150567277	150573955	+	ENST00000255945.3@GIMAP4	ENST00000255945.3	protein_coding	150567277,150569888,150572129	150567437,150569959,150573955	Gene ID= ENSG00000133574.9 TPM= 10.62 Transcript Type= protein_coding
chr7	150625375	150632385	150625375	150632385	-	ENST00000328902.9@GIMAP6	ENST00000328902.9	protein_coding	150632169,150630058,150625375	150632385,150630142,150628512	Gene ID= ENSG00000133561.15 TPM= 23.17 Transcript Type= protein_coding
chr7	150716557	150724284	150716557	150724284	+	ENST00000307194.5@GIMAP1	ENST00000307194.5	protein_coding	150716557,150719042,150720048	150716690,150719090,150724284	Gene ID= ENSG00000213203.2 TPM= 2.9 Transcript Type= protein_coding
chr7	150791287	150800364	150791287	150800364	-	ENST00000326442.9@TMEM176B	ENST00000326442.9	protein_coding	150800298,150796366,150793961,150793544,150793088,150792056,150791287	150800364,150796574,150794071,150793600,150793315,150792175,150791623	Gene ID= ENSG00000106565.17 TPM= 6.76 Transcript Type= protein_coding
chr7	150949423	150955810	150949423	150955810	-	ENST00000461280.1@KCNH2	ENST00000461280.1	protein_coding	150955396,150952425,150951448,150950921,150949423	150955810,150952853,150951835,150951120,150950420	Gene ID= ENSG00000055118.14 TPM= 1.93 Transcript Type= retained_intron
chr7	150990995	151014588	150990995	151014588	+	ENST00000297494.7@NOS3	ENST00000297494.7	protein_coding	150990995,150993753,150995203,150996404,150996763,150998357,150998539,150998946,150999190,151000498,151001231,151001544,151001821,151002200,151006427,151006889,151007102,151008930,151009189,151009398,151010115,151010597,151010899,151012351,151013231,151013724,151014008	150991300,150993961,150995314,150996552,150996925,150998448,150998680,150999085,150999364,151000599,151001425,151001617,151001965,151002304,151006494,151007005,151007276,151009062,151009267,151009585,151010287,151010807,151010986,151012472,151013379,151013918,151014588	Gene ID= ENSG00000164867.10 TPM= 2.41 Transcript Type= protein_coding
chr7	150993782	151014944	150993782	151014944	+	transcript4988.chr7.nic@NOS3	transcript4988.chr7.nic	protein_coding	150993782,150995203,150996404,150996763,150998357,150998539,150998946,150999190,151000498,151001231,151001544,151001821,151002200,151006427,151006889,151007102,151008930,151009189,151009398,151010115,151010597,151010899,151012351,151013231,151013724,151014008	150993961,150995314,150996552,150996925,150998448,150998680,150999085,150999364,151000599,151001425,151001617,151001965,151002304,151006494,151007005,151007276,151009062,151009267,151009585,151010287,151010807,151010986,151012472,151013379,151013918,151014944	Gene ID= ENSG00000164867.10 TPM= 5.31 Transcript Type= NA
chr7	151028423	151047782	151028423	151047782	+	ENST00000358849.8@ABCB8	ENST00000358849.8	protein_coding	151028423,151033605,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151040268,151040498,151040828,151041099,151041961,151043971,151045209	151028610,151033917,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151040301,151040634,151040922,151041232,151042108,151044221,151047782	Gene ID= ENSG00000197150.12 TPM= 3.86 Transcript Type= protein_coding
chr7	151033090	151045562	151033090	151045562	+	transcript4995.chr7.nic@ABCB8	transcript4995.chr7.nic	protein_coding	151033090,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151040268,151040498,151040828,151041099,151041961,151043971,151045209	151033604,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151040301,151040634,151040922,151041232,151042108,151044221,151045562	Gene ID= ENSG00000197150.12 TPM= 1.93 Transcript Type= NA
chr7	151059570	151076527	151059570	151076527	+	ENST00000413384.6@SLC4A2	ENST00000413384.6	protein_coding	151059570,151061925,151064202,151064526,151064848,151066517,151066851,151067874,151069947,151070181,151070457,151070727,151071072,151071390,151071689,151071942,151074039,151074399,151074675,151075255,151075606,151076013,151076287	151059762,151062038,151064367,151064767,151064966,151066761,151066993,151068054,151070082,151070346,151070571,151070911,151071297,151071605,151071837,151072136,151074293,151074488,151074841,151075508,151075775,151076186,151076527	Gene ID= ENSG00000164889.13 TPM= 33.79 Transcript Type= protein_coding
chr7	151059567	151076523	151059567	151076523	+	transcript5004.chr7.nnic@SLC4A2	transcript5004.chr7.nnic	protein_coding	151059567,151061925,151064202,151064526,151064848,151066517,151066851,151067874,151069947,151070181,151070457,151070727,151071072,151071401,151071689,151071942,151074039,151074399,151074675,151075255,151075606,151076013,151076287	151059762,151062038,151064367,151064767,151064966,151066761,151066993,151068054,151070082,151070346,151070571,151070911,151071297,151071605,151071837,151072136,151074099,151074488,151074841,151075508,151075775,151076186,151076523	Gene ID= ENSG00000164889.13 TPM= 2.9 Transcript Type= NA
chr7	151076626	151080879	151076626	151080879	-	transcript5013.chr7.nic@FASTK	transcript5013.chr7.nic	protein_coding	151080437,151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080879,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 156.09 Transcript Type= NA
chr7	151076626	151080842	151076626	151080842	-	ENST00000353841.6@FASTK	ENST00000353841.6	protein_coding	151080685,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080842,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 13.58 Transcript Type= protein_coding
chr7	151076626	151080879	151076626	151080879	-	transcript5030.chr7.nic@FASTK	transcript5030.chr7.nic	protein_coding	151080437,151079500,151078842,151078562,151077879,151077621,151077101,151076913,151076626	151080879,151079922,151079021,151078701,151078092,151077780,151077401,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 10.8 Transcript Type= NA
chr7	151076626	151080844	151076626	151080844	-	ENST00000297532.10@FASTK	ENST00000297532.10	protein_coding	151080685,151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080844,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 48.42 Transcript Type= protein_coding
chr7	151076646	151080790	151076646	151080790	-	ENST00000482806.5@FASTK	ENST00000482806.5	protein_coding	151080685,151079500,151078842,151078562,151077879,151077621,151077101,151076913,151076646	151080790,151079922,151079021,151078701,151078092,151077780,151077401,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 1.05 Transcript Type= retained_intron
chr7	151076624	151080798	151076624	151080798	-	transcript5054.chr7.nnic@NA	transcript5054.chr7.nnic	NA	151076624	151080798	Gene ID= novel_gene_chr7_5055 TPM= 3.86 Transcript Type= NA
chr7	151081080	151083546	151081080	151083546	-	ENST00000297533.8@TMUB1	ENST00000297533.8	protein_coding	151083434,151082175,151081080	151083546,151082593,151081900	Gene ID= ENSG00000164897.12 TPM= 92.19 Transcript Type= protein_coding
chr7	151086458	151144434	151086458	151144434	+	transcript5065.chr7.nic@AGAP3	transcript5065.chr7.nic	protein_coding	151086458,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151120520,151123794,151128580,151134400,151138143,151139979,151141898,151142163,151142412,151143341,151143737	151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151120745,151123886,151128684,151134568,151138313,151140116,151142052,151142253,151142634,151143596,151144434	Gene ID= ENSG00000133612.18 TPM= 7.56 Transcript Type= NA
chr7	151086459	151144434	151086459	151144434	+	transcript5074.chr7.nnic@AGAP3	transcript5074.chr7.nnic	protein_coding	151086459,151086805,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151141898,151142163,151142412,151143341,151143737	151086659,151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151142052,151142253,151142634,151143596,151144434	Gene ID= ENSG00000133612.18 TPM= 9.01 Transcript Type= NA
chr7	151086305	151123636	151086305	151123636	+	transcript5079.chr7.nic@AGAP3	transcript5079.chr7.nic	protein_coding	151086305,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151120520,151122725	151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151120745,151123636	Gene ID= ENSG00000133612.18 TPM= 8.21 Transcript Type= NA
chr7	151086478	151123638	151086478	151123638	+	transcript5083.chr7.nnic@AGAP3	transcript5083.chr7.nnic	protein_coding	151086478,151086805,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151122725	151086549,151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123638	Gene ID= ENSG00000133612.18 TPM= 7.24 Transcript Type= NA
chr7	151114678	151123638	151114678	151123638	+	ENST00000335367.7@AGAP3	ENST00000335367.7	protein_coding	151114678,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151122725	151115641,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123638	Gene ID= ENSG00000133612.18 TPM= 5.31 Transcript Type= protein_coding
chr7	151086742	151144432	151086742	151144432	+	ENST00000397238.6@AGAP3	ENST00000397238.6	protein_coding	151086742,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151138143,151139979,151141898,151142163,151142412,151143341,151143737	151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151138313,151140116,151142052,151142253,151142634,151143596,151144432	Gene ID= ENSG00000133612.18 TPM= 18.18 Transcript Type= protein_coding
chr7	151086742	151123635	151086742	151123635	+	ENST00000473312.5@AGAP3	ENST00000473312.5	protein_coding	151086742,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151122725	151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123635	Gene ID= ENSG00000133612.18 TPM= 15.93 Transcript Type= protein_coding
chr7	151175698	151187760	151175698	151187760	-	transcript5096.chr7.nnic@ASB10	transcript5096.chr7.nnic	protein_coding	151187452,151186815,151186392,151180939,151176563,151176112,151175698	151187760,151187053,151186659,151181458,151176676,151176297,151175966	Gene ID= ENSG00000146926.10 TPM= 4.3 Transcript Type= NA
chr7	151175698	151187832	151175698	151187832	-	ENST00000377867.7@ASB10	ENST00000377867.7	protein_coding	151187452,151186392,151180939,151176563,151176112,151175698	151187832,151186659,151181458,151176676,151176297,151175966	Gene ID= ENSG00000146926.10 TPM= 13.95 Transcript Type= protein_coding
chr7	151175698	151187244	151175698	151187244	-	transcript5104.chr7.nnic@ASB10	transcript5104.chr7.nnic	protein_coding	151186815,151186392,151176563,151176112,151175698	151187244,151186659,151176676,151176297,151175966	Gene ID= ENSG00000146926.10 TPM= 3.25 Transcript Type= NA
chr7	151175702	151187155	151175702	151187155	-	ENST00000420175.2@ASB10	ENST00000420175.2	protein_coding	151186815,151186392,151180939,151176563,151176112,151175702	151187155,151186659,151181458,151176676,151176297,151175966	Gene ID= ENSG00000146926.10 TPM= 24.25 Transcript Type= protein_coding
chr7	151212490	151227230	151212490	151227230	-	ENST00000287844.6@ABCF2	ENST00000287844.6	protein_coding	151227163,151226305,151224776,151223932,151223678,151222521,151221578,151219064,151218754,151218561,151218081,151215967,151215604,151214879,151212490	151227230,151226500,151224988,151224114,151223849,151222616,151221680,151219159,151218873,151218650,151218191,151216029,151215732,151215082,151214191	Gene ID= ENSG00000033050.7 TPM= 58.88 Transcript Type= protein_coding
chr7	151207837	151227166	151207837	151227166	-	ENST00000222388.6@ABCF2	ENST00000222388.6	protein_coding	151227163,151226305,151224776,151223932,151223678,151222521,151221578,151219064,151218754,151218561,151218081,151215967,151215604,151214879,151214058,151207837	151227166,151226500,151224988,151224114,151223849,151222616,151221680,151219159,151218873,151218650,151218191,151216029,151215732,151215082,151214191,151208107	Gene ID= ENSG00000033050.7 TPM= 7.72 Transcript Type= protein_coding
chr7	151232470	151238819	151232470	151238819	+	transcript5126.chr7.nnic@CHPF2	transcript5126.chr7.nnic	protein_coding	151232470,151235048,151236408,151237374	151234274,151235628,151236590,151238819	Gene ID= ENSG00000033100.16 TPM= 4.83 Transcript Type= NA
chr7	151232843	151238819	151232843	151238819	+	transcript5130.chr7.nic@CHPF2	transcript5130.chr7.nic	protein_coding	151232843,151235048	151234274,151238819	Gene ID= ENSG00000033100.16 TPM= 6.76 Transcript Type= NA
chr7	151232499	151238827	151232499	151238827	+	ENST00000035307.6@CHPF2	ENST00000035307.6	protein_coding	151232499,151235048,151236408,151237374	151234274,151235612,151236590,151238827	Gene ID= ENSG00000033100.16 TPM= 27.99 Transcript Type= protein_coding
chr7	151238973	151248973	151238973	151248973	-	ENST00000262188.12@SMARCD3	ENST00000262188.12	protein_coding	151248485,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151240425,151240112,151239624,151239396,151238973	151248973,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151240522,151240247,151239746,151239497,151239156	Gene ID= ENSG00000082014.16 TPM= 125.65 Transcript Type= protein_coding
chr7	151341699	151378449	151341699	151378449	+	ENST00000413040.6@NUB1	ENST00000413040.6	protein_coding	151341699,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151366939,151367861,151368735,151374097,151375848,151376634,151377047	151341846,151345466,151349240,151351482,151352882,151355950,151356222,151360247,151367125,151367968,151368887,151374201,151375943,151376811,151378449	Gene ID= ENSG00000013374.15 TPM= 14.48 Transcript Type= protein_coding
chr7	151341808	151361249	151341808	151361249	+	transcript5146.chr7.nic@NUB1	transcript5146.chr7.nic	protein_coding	151341808,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151361059	151341965,151345466,151349240,151351482,151352882,151355950,151356222,151360914,151361249	Gene ID= ENSG00000013374.15 TPM= 3.86 Transcript Type= NA
chr7	151341804	151361249	151341804	151361249	+	ENST00000468404.5@NUB1	ENST00000468404.5	protein_coding	151341804,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151361059	151341846,151345466,151349240,151351482,151352882,151355950,151356222,151360914,151361249	Gene ID= ENSG00000013374.15 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr7	151466012	151519924	151466012	151519924	-	ENST00000262187.9@RHEB	ENST00000262187.9	protein_coding	151519460,151490943,151484737,151477333,151471549,151471394,151470571,151466012	151519924,151491014,151484804,151477415,151471605,151471441,151470652,151467211	Gene ID= ENSG00000106615.9 TPM= 27.03 Transcript Type= protein_coding
chr7	151519319	151521189	151519319	151521189	+	transcript5158.chr7.nnic@NA	transcript5158.chr7.nnic	NA	151519319	151521189	Gene ID= novel_gene_chr7_5159 TPM= 2.9 Transcript Type= NA
chr7	151556124	151632353	151556124	151632353	-	ENST00000418337.6@PRKAG2	ENST00000418337.6	protein_coding	151632069,151595345,151576371,151574891,151572664,151570171,151568716,151565720,151565346,151564078,151560524,151556124	151632353,151595454,151576452,151574949,151572709,151570225,151568842,151565885,151565383,151564224,151560617,151557232	Gene ID= ENSG00000106617.13 TPM= 5.79 Transcript Type= protein_coding
chr7	151556161	151736314	151556161	151736314	-	ENST00000492843.5@PRKAG2	ENST00000492843.5	protein_coding	151735900,151675420,151632069,151595345,151576371,151574891,151572664,151570171,151568716,151565720,151565346,151564078,151560524,151556161	151736314,151675637,151632138,151595454,151576452,151574949,151572709,151570225,151568842,151565885,151565383,151564224,151560617,151557232	Gene ID= ENSG00000106617.13 TPM= 7.72 Transcript Type= protein_coding
chr7	151734236	151736265	151734236	151736265	-	transcript5170.chr7.nnic@NA	transcript5170.chr7.nnic	NA	151734236	151736265	Gene ID= novel_gene_chr7_5171 TPM= 1.93 Transcript Type= NA
chr7	152025683	152122347	152025683	152122347	+	transcript5175.chr7.nnic@GALNT11	transcript5175.chr7.nnic	protein_coding	152025683,152079287,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546	152025884,152079408,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122347	Gene ID= ENSG00000178234.12 TPM= 1.93 Transcript Type= NA
chr7	152025643	152122337	152025643	152122337	+	transcript5178.chr7.nnic@GALNT11	transcript5178.chr7.nnic	protein_coding	152025643,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546	152025884,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152121015,152122337	Gene ID= ENSG00000178234.12 TPM= 1.93 Transcript Type= NA
chr7	152025643	152122347	152025643	152122347	+	transcript5180.chr7.nic@GALNT11	transcript5180.chr7.nic	protein_coding	152025643,152094190,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546	152025884,152094522,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122347	Gene ID= ENSG00000178234.12 TPM= 1.93 Transcript Type= NA
chr7	152025693	152122347	152025693	152122347	+	ENST00000430044.6@GALNT11	ENST00000430044.6	protein_coding	152025693,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546	152025884,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122347	Gene ID= ENSG00000178234.12 TPM= 24.13 Transcript Type= protein_coding
chr7	152202996	152436345	152202996	152436345	-	transcript5183.chr7.nic@KMT2C	transcript5183.chr7.nic	protein_coding	152435626,152358587,152330601,152315138,152311798,152309966,152273705,152265038,152263016,152252546,152251939,152250853,152249876,152247902,152238707,152235817,152230220,152229923,152224435,152224015,152222573,152222001,152220523,152207300,152205106,152202996	152436345,152358675,152330739,152315338,152311946,152310075,152273867,152265209,152263130,152252715,152252090,152250966,152249953,152248620,152238826,152235933,152230321,152230027,152224616,152224179,152222682,152222066,152220735,152207428,152205225,152203064	Gene ID= ENSG00000055609.17 TPM= 12.55 Transcript Type= NA
chr7	152162774	152181382	152162774	152181382	-	transcript5198.chr7.nnic@KMT2C	transcript5198.chr7.nnic	protein_coding	152180711,152179834,152176191,152174131,152171264,152169186,152167146,152162774	152181382,152180126,152178010,152174242,152171344,152169249,152167378,152163826	Gene ID= ENSG00000055609.17 TPM= 5.79 Transcript Type= NA
chr7	152463786	152465549	152463786	152465549	+	ENST00000564834.1@LINC01003	ENST00000564834.1	lincRNA	152463786	152465549	Gene ID= ENSG00000261455.1 TPM= 55.99 Transcript Type= lincRNA
chr7	152759783	152855378	152759783	152855378	+	transcript5207.chr7.nic@ACTR3B	transcript5207.chr7.nic	protein_coding	152759783,152783187,152800531,152801621,152811697,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152783242,152800655,152801731,152811733,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152855378	Gene ID= ENSG00000133627.17 TPM= 2.82 Transcript Type= NA
chr7	152759746	152855378	152759746	152855378	+	transcript5210.chr7.nnic@ACTR3B	transcript5210.chr7.nnic	protein_coding	152759746,152800531,152801621,152811697,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152800655,152801731,152811733,152814645,152816588,152820347,152823515,152825122,152852251,152853577,152855378	Gene ID= ENSG00000133627.17 TPM= 2.17 Transcript Type= NA
chr7	152759749	152855378	152759749	152855378	+	ENST00000256001.12@ACTR3B	ENST00000256001.12	protein_coding	152759749,152783187,152800531,152801621,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152783242,152800655,152801731,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152855378	Gene ID= ENSG00000133627.17 TPM= 2.82 Transcript Type= protein_coding
chr7	152759744	152855378	152759744	152855378	+	transcript5218.chr7.nnic@ACTR3B	transcript5218.chr7.nnic	protein_coding	152759744,152801621,152811697,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152801731,152811733,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152855378	Gene ID= ENSG00000133627.17 TPM= 3.78 Transcript Type= NA
chr7	152759788	152854949	152759788	152854949	+	ENST00000397282.2@ACTR3B	ENST00000397282.2	protein_coding	152759788,152800531,152801621,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152800655,152801731,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152854949	Gene ID= ENSG00000133627.17 TPM= 1.93 Transcript Type= protein_coding
chr7	154430011	154434150	154430011	154434150	+	transcript5234.chr7.nnic@DPP6	transcript5234.chr7.nnic	protein_coding	154430011,154430906	154430055,154434150	Gene ID= ENSG00000130226.16 TPM= 14.48 Transcript Type= NA
chr7	154435580	154435729	154435580	154435729	+	transcript5235.chr7.nnic@NA	transcript5235.chr7.nnic	NA	154435580	154435729	Gene ID= novel_gene_chr7_5236 TPM= 1.93 Transcript Type= NA
chr7	155003454	155004865	155003454	155004865	+	transcript5240.chr7.nnic@PAXIP1-AS1	transcript5240.chr7.nnic	lincRNA	155003454,155003962	155003708,155004865	Gene ID= ENSG00000273344.1 TPM= 3.86 Transcript Type= NA
chr7	155003448	155005703	155003448	155005703	+	ENST00000608317.1@PAXIP1-AS1	ENST00000608317.1	lincRNA	155003448	155005703	Gene ID= ENSG00000273344.1 TPM= 1.93 Transcript Type= lincRNA
chr7	155297829	155310233	155297829	155310233	+	transcript5248.chr7.nic@INSIG1	transcript5248.chr7.nic	protein_coding	155297829,155298259,155301566,155302251,155302747,155303825,155308241	155297959,155298697,155301690,155302417,155302846,155303895,155310233	Gene ID= ENSG00000186480.12 TPM= 1.93 Transcript Type= NA
chr7	155297776	155310235	155297776	155310235	+	ENST00000340368.8@INSIG1	ENST00000340368.8	protein_coding	155297776,155298259,155301566,155302251,155302747,155308241	155297959,155298697,155301690,155302417,155302846,155310235	Gene ID= ENSG00000186480.12 TPM= 11.58 Transcript Type= protein_coding
chr7	155644451	155701183	155644451	155701183	+	ENST00000287912.7@RBM33	ENST00000287912.7	protein_coding	155644451,155665175,155672867,155678608,155680590,155700773	155644919,155665253,155672915,155678684,155680908,155701183	Gene ID= ENSG00000184863.10 TPM= 19.31 Transcript Type= protein_coding
chr7	155644679	155781479	155644679	155781479	+	ENST00000401878.7@RBM33	ENST00000401878.7	protein_coding	155644679,155665175,155672867,155678608,155680590,155700773,155706860,155711203,155718385,155737530,155738060,155739715,155741819,155744961,155763812,155766467,155774559,155774993	155644919,155665253,155672915,155678684,155680908,155700944,155707068,155711455,155718443,155737662,155738403,155740026,155742106,155745602,155764018,155766655,155774647,155781479	Gene ID= ENSG00000184863.10 TPM= 2.9 Transcript Type= protein_coding
chr7	156638363	156640654	156638363	156640654	-	ENST00000333319.6@LINC01006	ENST00000333319.6	lincRNA	156638363	156640654	Gene ID= ENSG00000182648.11 TPM= 7.72 Transcript Type= lincRNA
chr7	156677791	156893230	156677791	156893230	-	ENST00000353442.9@LMBR1	ENST00000353442.9	protein_coding	156892928,156836813,156833753,156826605,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156688030,156677791	156893230,156836885,156833792,156826744,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156688191,156684163	Gene ID= ENSG00000105983.20 TPM= 1.93 Transcript Type= protein_coding
chr7	156680877	156893208	156680877	156893208	-	ENST00000359422.8@LMBR1	ENST00000359422.8	protein_coding	156892928,156836813,156833753,156826605,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156680877	156893208,156836885,156833792,156826744,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156684163	Gene ID= ENSG00000105983.20 TPM= 2.9 Transcript Type= protein_coding
chr7	156949723	156973182	156949723	156973182	+	ENST00000275820.3@NOM1	ENST00000275820.3	protein_coding	156949723,156952474,156954103,156959851,156962151,156963008,156963905,156966270,156966961,156969087,156969529	156950724,156952598,156954298,156960174,156962261,156963175,156964026,156966402,156967092,156969196,156973182	Gene ID= ENSG00000146909.7 TPM= 3.86 Transcript Type= protein_coding
chr7	157138926	157269372	157138926	157269372	+	transcript5291.chr7.nnic@UBE3C	transcript5291.chr7.nnic	protein_coding	157138926,157139222,157163810,157169048,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585	157139164,157139338,157163863,157169122,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269372	Gene ID= ENSG00000009335.17 TPM= 24.3 Transcript Type= NA
chr7	157138913	157269372	157138913	157269372	+	ENST00000348165.9@UBE3C	ENST00000348165.9	protein_coding	157138913,157163810,157169048,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585	157139338,157163863,157169122,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269372	Gene ID= ENSG00000009335.17 TPM= 54.03 Transcript Type= protein_coding
chr7	157138926	157269372	157138926	157269372	+	transcript5300.chr7.nnic@UBE3C	transcript5300.chr7.nnic	protein_coding	157138926,157163810,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585	157139338,157163863,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269372	Gene ID= ENSG00000009335.17 TPM= 10.78 Transcript Type= NA
chr7	157336966	157417439	157336966	157417439	+	ENST00000262177.8@DNAJB6	ENST00000262177.8	protein_coding	157336966,157358547,157363161,157366502,157367373,157382246,157384867,157385541,157409795,157416016	157337144,157358637,157363270,157366561,157367483,157382377,157385008,157385611,157410001,157417439	Gene ID= ENSG00000105993.14 TPM= 440.66 Transcript Type= protein_coding
chr7	157336966	157386324	157336966	157386324	+	ENST00000429029.6@DNAJB6	ENST00000429029.6	protein_coding	157336966,157358547,157363161,157366502,157367373,157382246,157384867,157385541	157337144,157358637,157363270,157366561,157367483,157382377,157385008,157386324	Gene ID= ENSG00000105993.14 TPM= 34.75 Transcript Type= protein_coding
chr7	157337023	157417433	157337023	157417433	+	ENST00000459889.5@DNAJB6	ENST00000459889.5	protein_coding	157337023,157358547,157363161,157366502,157367373,157382246,157384867,157385541,157409795,157416016	157337144,157358637,157363270,157366561,157367483,157382377,157385008,157385611,157415529,157417433	Gene ID= ENSG00000105993.14 TPM= 32.34 Transcript Type= nonsense_mediated_decay
chr7	157539056	157569025	157539056	157569025	-	transcript5341.chr7.nic@PTPRN2	transcript5341.chr7.nic	protein_coding	157568902,157548946,157539056	157569025,157549019,157540785	Gene ID= ENSG00000155093.17 TPM= 4.83 Transcript Type= NA
chr7	158628224	158630842	158628224	158630842	-	transcript5342.chr7.nnic@NA	transcript5342.chr7.nnic	NA	158628224	158630842	Gene ID= novel_gene_chr7_5343 TPM= 1.93 Transcript Type= NA
chr7	158631314	158704804	158631314	158704804	-	ENST00000409423.5@NCAPG2	ENST00000409423.5	protein_coding	158704724,158703650,158701822,158693309,158692842,158690568,158689819,158687348,158686172,158683300,158680721,158679960,158675477,158671514,158664528,158664184,158662194,158658338,158656552,158656260,158655339,158655118,158654595,158652293,158650832,158646460,158645519,158644289,158631314	158704804,158703702,158701938,158693497,158692956,158690722,158689953,158687442,158686241,158683386,158680816,158680085,158675656,158671666,158664750,158664296,158662367,158658408,158656705,158656433,158655455,158655258,158654694,158652480,158650972,158646563,158645619,158644388,158631717	Gene ID= ENSG00000146918.19 TPM= 1.93 Transcript Type= protein_coding
chr7	158730995	158829575	158730995	158829575	-	transcript5352.chr7.nnic@ESYT2	transcript5352.chr7.nnic	protein_coding	158829089,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158757332,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158730995	158829575,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158757433,158749723,158748280,158743678,158741896,158739121,158737179,158735608,158734471,158734252	Gene ID= ENSG00000117868.15 TPM= 10.62 Transcript Type= NA
chr7	158730995	158829628	158730995	158829628	-	ENST00000251527.9@ESYT2	ENST00000251527.9	protein_coding	158829089,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158730995	158829628,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158749723,158748280,158743678,158741896,158739121,158737179,158735608,158734471,158734252	Gene ID= ENSG00000117868.15 TPM= 46.82 Transcript Type= protein_coding
chr7	158733611	158829575	158733611	158829575	-	transcript5362.chr7.nnic@ESYT2	transcript5362.chr7.nnic	protein_coding	158829089,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158733611	158829575,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158749723,158748280,158743678,158741896,158739121,158737117,158735608,158734471,158734252	Gene ID= ENSG00000117868.15 TPM= 2.41 Transcript Type= NA
chr7	158733611	158818908	158733611	158818908	-	transcript5363.chr7.nnic@ESYT2	transcript5363.chr7.nnic	protein_coding	158818771,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158733611	158818908,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158749723,158748280,158743678,158741896,158739121,158737179,158735608,158734471,158734252	Gene ID= ENSG00000117868.15 TPM= 1.93 Transcript Type= NA
chr7	158733611	158830069	158733611	158830069	-	transcript5365.chr7.nic@ESYT2	transcript5365.chr7.nic	protein_coding	158829821,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158733611	158830069,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158749723,158748280,158743678,158741896,158739121,158737179,158735608,158734471,158734252	Gene ID= ENSG00000117868.15 TPM= 1.93 Transcript Type= NA
chr7	158824110	158826834	158824110	158826834	+	transcript5376.chr7.nnic@NA	transcript5376.chr7.nnic	NA	158824110	158826834	Gene ID= novel_gene_chr7_5377 TPM= 2.9 Transcript Type= NA
chr7	158826517	158829536	158826517	158829536	-	transcript5378.chr7.nnic@NA	transcript5378.chr7.nnic	NA	158826517	158829536	Gene ID= novel_gene_chr7_5379 TPM= 4.83 Transcript Type= NA
chr7	158856680	158946189	158856680	158946189	+	transcript5385.chr7.nnic@WDR60	transcript5385.chr7.nnic	protein_coding	158856680,158869855,158871142,158876609,158879684,158884564,158887021,158891265,158901739,158902376,158905989,158911550,158912985,158914233,158918740,158922377,158923571,158926187,158926402,158926992,158930455,158934418,158941925,158945581	158856750,158869908,158871562,158876691,158879989,158884619,158887075,158891333,158901816,158902595,158906091,158911679,158913096,158914321,158918869,158922538,158923733,158926300,158926463,158927043,158930515,158934549,158942148,158946189	Gene ID= ENSG00000126870.15 TPM= 2.9 Transcript Type= NA
chr7	158856558	158891342	158856558	158891342	+	transcript5392.chr7.nic@WDR60	transcript5392.chr7.nic	protein_coding	158856558,158869855,158871142,158876609,158879684,158884564,158887021,158891265	158856750,158869908,158871562,158876691,158879989,158884619,158887075,158891342	Gene ID= ENSG00000126870.15 TPM= 1.93 Transcript Type= NA
chr7	158856578	158946189	158856578	158946189	+	ENST00000407559.7@WDR60	ENST00000407559.7	protein_coding	158856578,158869855,158871142,158876609,158879684,158884564,158887021,158891265,158901739,158902376,158905989,158911550,158912985,158914233,158918740,158922377,158923571,158926187,158926402,158926992,158930455,158934129,158934418,158941925,158945581	158856750,158869908,158871562,158876691,158879989,158884619,158887075,158891333,158901816,158902595,158906091,158911679,158913096,158914321,158918869,158922549,158923733,158926300,158926463,158927043,158930515,158934228,158934549,158942148,158946189	Gene ID= ENSG00000126870.15 TPM= 13.51 Transcript Type= protein_coding
chr7	159028175	159144957	159028175	159144957	-	ENST00000262178.6@VIPR2	ENST00000262178.6	protein_coding	159144721,159142446,159109812,159103757,159058481,159043035,159036752,159035952,159034581,159034213,159031938,159031828,159028175	159144957,159142545,159109919,159103854,159058578,159043176,159036902,159036012,159034650,159034304,159032067,159031869,159030789	Gene ID= ENSG00000106018.13 TPM= 8.69 Transcript Type= protein_coding
chr7	159030455	159097204	159030455	159097204	-	ENST00000377633.7@VIPR2	ENST00000377633.7	protein_coding	159096835,159058481,159043035,159036752,159035952,159034581,159034213,159031938,159031828,159030455	159097204,159058578,159043176,159036902,159036012,159034650,159034304,159032067,159031869,159030789	Gene ID= ENSG00000106018.13 TPM= 1.93 Transcript Type= protein_coding
chr7	159030646	159033516	159030646	159033516	+	transcript5405.chr7.nnic@NA	transcript5405.chr7.nnic	NA	159030646	159033516	Gene ID= novel_gene_chr7_5406 TPM= 1.93 Transcript Type= NA
chr8	230008	232231	230008	232231	-	ENST00000606507.1@RPL23AP53	ENST00000606507.1	transcribed_processed_pseudogene	232129,230804,230008	232231,230907,230170	Gene ID= ENSG00000223508.5 TPM= 2.9 Transcript Type= processed_transcript
chr8	232397	247340	232397	247340	+	ENST00000398612.2@ZNF596	ENST00000398612.2	protein_coding	232397,240824,242887,243722,244619,245154	232694,240907,243013,243805,244701,247340	Gene ID= ENSG00000172748.13 TPM= 1.93 Transcript Type= protein_coding
chr8	232397	237666	232397	237666	+	transcript11.chr8.nnic@NA	transcript11.chr8.nnic	NA	232397	237666	Gene ID= novel_gene_chr8_12 TPM= 1.93 Transcript Type= NA
chr8	489803	544998	489803	544998	-	ENST00000324079.10@TDRP	ENST00000324079.10	protein_coding	544650,494494,489803	544998,494597,492744	Gene ID= ENSG00000180190.11 TPM= 1.93 Transcript Type= protein_coding
chr8	664200	731239	664200	731239	-	ENST00000262109.7@ERICH1	ENST00000262109.7	protein_coding	731140,715861,692478,673289,668598,664200	731239,716007,692612,674047,668792,664676	Gene ID= ENSG00000104714.13 TPM= 5.79 Transcript Type= protein_coding
chr8	1762625	1763297	1762625	1763297	-	ENST00000518481.1@AC100810.1	ENST00000518481.1	antisense_RNA	1763023,1762625	1763297,1762928	Gene ID= ENSG00000253982.1 TPM= 11.58 Transcript Type= antisense_RNA
chr8	1763704	1786570	1763704	1786570	+	ENST00000331222.5@CLN8	ENST00000331222.5	protein_coding	1763704,1770932,1780250	1763885,1771597,1786570	Gene ID= ENSG00000182372.9 TPM= 11.58 Transcript Type= protein_coding
chr8	1823976	1958633	1823976	1958633	+	ENST00000349830.7@ARHGEF10	ENST00000349830.7	protein_coding	1823976,1843353,1857960,1859897,1864373,1866526,1869194,1876571,1880048,1882635,1885601,1893569,1894393,1896333,1898433,1903281,1905571,1909295,1922964,1923468,1923774,1925283,1926377,1928427,1929286,1933800,1945481,1952705,1956749	1824113,1843436,1858115,1860184,1864436,1866602,1869250,1876734,1880164,1882749,1885707,1893646,1894572,1896449,1898525,1903451,1905716,1909470,1923079,1923595,1923874,1925404,1926463,1928650,1929443,1933942,1945655,1952827,1958633	Gene ID= ENSG00000104728.15 TPM= 2.9 Transcript Type= protein_coding
chr8	1973878	2006936	1973878	2006936	+	ENST00000320248.3@KBTBD11	ENST00000320248.3	protein_coding	1973878,2000285	1973935,2006936	Gene ID= ENSG00000176595.3 TPM= 12.55 Transcript Type= protein_coding
chr8	2045042	2145456	2045042	2145456	+	transcript41.chr8.nnic@MYOM2	transcript41.chr8.nnic	protein_coding	2045042,2050755,2052158,2057348,2057623,2059153,2069278,2069447,2072345,2073339,2076141,2078734,2079560,2080319,2085263,2090008,2092346,2093970,2096247,2098857,2100876,2102667,2106242,2106491,2108786,2109395,2115960,2116216,2117885,2123252,2123555,2124179,2129127,2140723,2141141,2142375,2143401,2144664	2045168,2050873,2052313,2057486,2057780,2059245,2069366,2069497,2072509,2073500,2076282,2078933,2079613,2080444,2085390,2090191,2092520,2094091,2096434,2098983,2101054,2102781,2106398,2106597,2108830,2109531,2116104,2116275,2117952,2123365,2123642,2124217,2129232,2140886,2141177,2142397,2143456,2145456	Gene ID= ENSG00000036448.9 TPM= 102.93 Transcript Type= NA
chr8	2045040	2145456	2045040	2145456	+	ENST00000262113.8@MYOM2	ENST00000262113.8	protein_coding	2045040,2050755,2052158,2057348,2057623,2059153,2069278,2069447,2072345,2073339,2076141,2078734,2079560,2085263,2090008,2092346,2093970,2096247,2098857,2100876,2102667,2106242,2106491,2108786,2109395,2115960,2116216,2117885,2123252,2123555,2124179,2129127,2140723,2141141,2142375,2143401,2144664	2045168,2050873,2052313,2057486,2057780,2059245,2069366,2069497,2072509,2073500,2076282,2078933,2079613,2085390,2090191,2092520,2094091,2096434,2098983,2101054,2102781,2106398,2106597,2108830,2109531,2116104,2116275,2117952,2123365,2123642,2124217,2129232,2140886,2141177,2142397,2143456,2145456	Gene ID= ENSG00000036448.9 TPM= 650.59 Transcript Type= protein_coding
chr8	6405406	6406542	6405406	6406542	-	ENST00000606853.1@AC016065.1	ENST00000606853.1	antisense_RNA	6405406	6406542	Gene ID= ENSG00000246089.3 TPM= 1.93 Transcript Type= antisense_RNA
chr8	6406592	6648504	6406592	6648504	+	ENST00000344683.9@MCPH1	ENST00000344683.9	protein_coding	6406592,6409279,6414765,6431499,6436048,6438953,6442067,6444393,6455143,6477594,6480714,6499852,6621454,6642994	6406689,6409370,6414883,6431586,6436162,6439096,6442156,6445547,6455252,6477631,6480876,6499929,6621691,6648504	Gene ID= ENSG00000147316.12 TPM= 1.28 Transcript Type= protein_coding
chr8	6406597	6643623	6406597	6643623	+	transcript74.chr8.nnic@MCPH1	transcript74.chr8.nnic	protein_coding	6406597,6409279,6414765,6431499,6436048,6438953,6442067,6444393,6455143,6477594,6480714,6499852,6642994	6406689,6409370,6414883,6431586,6436162,6439096,6442156,6445547,6455252,6477631,6480876,6499929,6643623	Gene ID= ENSG00000147316.12 TPM= 3.21 Transcript Type= NA
chr8	6406596	6446567	6406596	6446567	+	ENST00000519480.5@MCPH1	ENST00000519480.5	protein_coding	6406596,6409279,6414765,6431499,6436048,6438953,6442067,6444393	6406689,6409370,6414883,6431586,6436162,6439096,6442156,6446567	Gene ID= ENSG00000147316.12 TPM= 4.18 Transcript Type= protein_coding
chr8	6708340	6759666	6708340	6759666	+	transcript87.chr8.nnic@AGPAT5	transcript87.chr8.nnic	protein_coding	6708340,6724870,6730711,6732561,6741661,6742533,6747670,6755051,6757163	6708887,6724939,6730826,6732650,6741751,6742577,6747828,6755174,6759666	Gene ID= ENSG00000155189.11 TPM= 7.72 Transcript Type= NA
chr8	6708340	6759666	6708340	6759666	+	transcript94.chr8.nnic@AGPAT5	transcript94.chr8.nnic	protein_coding	6708340,6724870,6730711,6732561,6755051,6757163	6708887,6724939,6730826,6732650,6755174,6759666	Gene ID= ENSG00000155189.11 TPM= 2.9 Transcript Type= NA
chr8	6708357	6759666	6708357	6759666	+	ENST00000285518.10@AGPAT5	ENST00000285518.10	protein_coding	6708357,6724870,6730711,6732561,6741661,6747670,6755051,6757163	6708887,6724939,6730826,6732650,6741751,6747828,6755174,6759666	Gene ID= ENSG00000155189.11 TPM= 17.38 Transcript Type= protein_coding
chr8	8375193	8381590	8375193	8381590	-	transcript103.chr8.nic@PRAG1	transcript103.chr8.nic	protein_coding	8381418,8375193	8381590,8378078	Gene ID= ENSG00000275342.4 TPM= 1.93 Transcript Type= NA
chr8	8701938	8704106	8701938	8704106	+	ENST00000519106.1@CLDN23	ENST00000519106.1	protein_coding	8701938	8704106	Gene ID= ENSG00000253958.1 TPM= 5.79 Transcript Type= protein_coding
chr8	9136255	9150696	9136255	9150696	-	ENST00000310455.3@PPP1R3B	ENST00000310455.3	protein_coding	9150563,9136255	9150696,9141668	Gene ID= ENSG00000173281.4 TPM= 59.85 Transcript Type= protein_coding
chr8	9139563	9151574	9139563	9151574	-	ENST00000519699.1@PPP1R3B	ENST00000519699.1	protein_coding	9151347,9139563	9151574,9141668	Gene ID= ENSG00000173281.4 TPM= 5.79 Transcript Type= protein_coding
chr8	9555900	9772672	9555900	9772672	+	transcript114.chr8.nnic@TNKS	transcript114.chr8.nnic	protein_coding	9555900,9580159,9615582,9679951,9680725,9704663,9706187,9706811,9708371,9709955,9710142,9720374,9726641,9730890,9733279,9734865,9735377,9748024,9751609,9752544,9761516,9763147,9764716,9765692,9766239,9770106,9772369,9772529	9556612,9580383,9615677,9679987,9680800,9704757,9706253,9706997,9708492,9710046,9710220,9720545,9726720,9731035,9733444,9735084,9735486,9748212,9751846,9752626,9761636,9763244,9764790,9765797,9766425,9770262,9772423,9772672	Gene ID= ENSG00000173273.15 TPM= 4.83 Transcript Type= NA
chr8	9555914	9782346	9555914	9782346	+	ENST00000310430.10@TNKS	ENST00000310430.10	protein_coding	9555914,9580159,9615582,9679951,9680725,9704663,9706187,9706811,9708371,9709955,9710142,9720374,9726641,9730890,9733279,9734865,9735377,9748024,9751609,9752544,9761516,9763147,9764716,9765692,9766239,9770106,9776650	9556612,9580383,9615677,9679987,9680800,9704757,9706253,9706997,9708492,9710046,9710220,9720545,9726720,9731035,9733444,9735084,9735486,9748212,9751846,9752626,9761636,9763244,9764790,9765797,9766425,9770262,9782346	Gene ID= ENSG00000173273.15 TPM= 9.65 Transcript Type= protein_coding
chr8	9555914	9710409	9555914	9710409	+	ENST00000520408.5@TNKS	ENST00000520408.5	protein_coding	9555914,9580159,9615582,9679951,9680725,9704663,9706187,9706811,9708371,9709955,9710142	9556612,9580383,9615677,9679987,9680800,9704757,9706253,9706997,9708492,9710046,9710409	Gene ID= ENSG00000173273.15 TPM= 1.93 Transcript Type= protein_coding
chr8	10764963	10839876	10764963	10839876	-	ENST00000314787.7@PINX1	ENST00000314787.7	protein_coding	10839738,10834666,10832892,10831665,10826152,10820193,10764963	10839876,10834775,10832984,10831743,10826244,10820269,10765916	Gene ID= ENSG00000254093.8 TPM= 1.93 Transcript Type= protein_coding
chr8	10765159	10839876	10765159	10839876	-	ENST00000519088.5@PINX1	ENST00000519088.5	protein_coding	10839738,10834666,10832892,10831665,10826152,10765159	10839876,10834775,10832984,10831743,10826244,10765916	Gene ID= ENSG00000254093.8 TPM= 6.76 Transcript Type= protein_coding
chr8	11111009	11201359	11111009	11201359	-	transcript128.chr8.nnic@XKR6	transcript128.chr8.nnic	protein_coding	11200576,11114021,11111009	11201359,11114092,11111892	Gene ID= ENSG00000171044.10 TPM= 1.93 Transcript Type= NA
chr8	11284416	11328146	11284416	11328146	+	ENST00000221086.7@MTMR9	ENST00000221086.7	protein_coding	11284416,11295194,11300023,11304841,11306190,11309527,11314923,11316673,11319687,11322625	11285070,11295302,11300148,11305014,11306407,11309688,11315064,11316893,11319838,11328146	Gene ID= ENSG00000104643.9 TPM= 15.44 Transcript Type= protein_coding
chr8	11284827	11324527	11284827	11324527	+	ENST00000530200.1@MTMR9	ENST00000530200.1	protein_coding	11284827,11295194,11297900,11300023,11304841,11306190,11309527,11314923,11316673,11319687,11322625	11285070,11295302,11297951,11300148,11305014,11306407,11309688,11315064,11316893,11319838,11324527	Gene ID= ENSG00000104643.9 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr8	11769737	11787345	11769737	11787345	+	transcript153.chr8.nnic@NEIL2	transcript153.chr8.nnic	protein_coding	11769737,11770278,11771446,11779598,11783203,11785963	11769791,11770335,11771585,11779950,11783399,11787345	Gene ID= ENSG00000154328.15 TPM= 4.42 Transcript Type= NA
chr8	11769639	11787345	11769639	11787345	+	ENST00000436750.7@NEIL2	ENST00000436750.7	protein_coding	11769639,11771446,11779598,11783203,11785963	11769791,11771585,11779950,11783399,11787345	Gene ID= ENSG00000154328.15 TPM= 43.03 Transcript Type= protein_coding
chr8	11769709	11787345	11769709	11787345	+	ENST00000403422.7@NEIL2	ENST00000403422.7	protein_coding	11769709,11779598,11783203,11785963	11769791,11779950,11783399,11787345	Gene ID= ENSG00000154328.15 TPM= 4.83 Transcript Type= protein_coding
chr8	11769699	11787340	11769699	11787340	+	ENST00000455213.6@NEIL2	ENST00000455213.6	protein_coding	11769699,11770174,11771446,11779598,11783203,11785963	11769791,11770335,11771585,11779950,11783399,11787340	Gene ID= ENSG00000154328.15 TPM= 14.07 Transcript Type= protein_coding
chr8	11769739	11787346	11769739	11787346	+	ENST00000284503.6@NEIL2	ENST00000284503.6	protein_coding	11769739,11771446,11779598,11783203,11785963	11770335,11771585,11779950,11783399,11787346	Gene ID= ENSG00000154328.15 TPM= 31.13 Transcript Type= protein_coding
chr8	11795573	11839304	11795573	11839304	+	ENST00000618539.4@FDFT1	ENST00000618539.4	protein_coding	11795573,11802258,11802759,11808794,11809667,11821750,11826024,11830244,11831518,11838388	11796011,11802455,11802931,11808891,11809850,11821878,11826215,11830420,11831670,11839304	Gene ID= ENSG00000079459.12 TPM= 2.41 Transcript Type= protein_coding
chr8	11795573	11839304	11795573	11839304	+	ENST00000615631.4@FDFT1	ENST00000615631.4	protein_coding	11795573,11802759,11808794,11809667,11821750,11826024,11830244,11831518,11838388	11796011,11802931,11808891,11809850,11821878,11826215,11830420,11831670,11839304	Gene ID= ENSG00000079459.12 TPM= 4.34 Transcript Type= protein_coding
chr8	11802611	11839309	11802611	11839309	+	ENST00000220584.8@FDFT1	ENST00000220584.8	protein_coding	11802611,11808794,11809667,11821750,11826024,11830244,11831518,11838388	11802931,11808891,11809850,11821878,11826215,11830420,11831670,11839309	Gene ID= ENSG00000079459.12 TPM= 10.62 Transcript Type= protein_coding
chr8	11808417	11838967	11808417	11838967	+	ENST00000525954.5@FDFT1	ENST00000525954.5	protein_coding	11808417,11809667,11821750,11826024,11830244,11831518,11838388	11808891,11809850,11821878,11826215,11830420,11831670,11838967	Gene ID= ENSG00000079459.12 TPM= 39.58 Transcript Type= protein_coding
chr8	11842524	11868229	11842524	11868229	-	ENST00000353047.10@CTSB	ENST00000353047.10	protein_coding	11868001,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11842524	11868229,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 16.46 Transcript Type= protein_coding
chr8	11844355	11868106	11844355	11868106	-	ENST00000533455.5@CTSB	ENST00000533455.5	protein_coding	11868001,11864376,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844355	11868106,11864463,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 96.61 Transcript Type= protein_coding
chr8	11844340	11868079	11844340	11868079	-	ENST00000345125.7@CTSB	ENST00000345125.7	protein_coding	11868001,11861361,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844340	11868079,11861479,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 1.04 Transcript Type= protein_coding
chr8	12721906	12755566	12721906	12755566	-	transcript225.chr8.nic@LONRF1	transcript225.chr8.nic	protein_coding	12754700,12743164,12740874,12737995,12737272,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12721906	12755566,12743282,12740996,12738144,12737360,12737140,12736764,12735400,12731857,12729332,12729063,12725879,12723254	Gene ID= ENSG00000154359.12 TPM= 24.53 Transcript Type= NA
chr8	12721906	12755547	12721906	12755547	-	transcript226.chr8.nic@LONRF1	transcript226.chr8.nic	protein_coding	12754700,12743164,12740874,12737995,12737272,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12721906	12755547,12743282,12740996,12738144,12737360,12737140,12736797,12735400,12731857,12729332,12729063,12725879,12723254	Gene ID= ENSG00000154359.12 TPM= 16.16 Transcript Type= NA
chr8	12721906	12755675	12721906	12755675	-	transcript229.chr8.nic@LONRF1	transcript229.chr8.nic	protein_coding	12754700,12743164,12740874,12737995,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12721906	12755675,12743282,12740996,12738144,12737140,12736764,12735400,12731857,12729332,12729063,12725879,12723254	Gene ID= ENSG00000154359.12 TPM= 94.03 Transcript Type= NA
chr8	12721894	12755490	12721894	12755490	-	ENST00000398246.7@LONRF1	ENST00000398246.7	protein_coding	12754700,12743164,12740874,12737995,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12721894	12755490,12743282,12740996,12738144,12737140,12736797,12735400,12731857,12729332,12729063,12725879,12723254	Gene ID= ENSG00000154359.12 TPM= 128.03 Transcript Type= protein_coding
chr8	12751304	12755519	12751304	12755519	-	transcript249.chr8.nnic@NA	transcript249.chr8.nnic	NA	12751304	12755519	Gene ID= novel_gene_chr8_250 TPM= 4.83 Transcript Type= NA
chr8	12754581	12757307	12754581	12757307	+	transcript245.chr8.nnic@NA	transcript245.chr8.nnic	NA	12754581	12757307	Gene ID= novel_gene_chr8_246 TPM= 2.9 Transcript Type= NA
chr8	12755854	12757972	12755854	12757972	+	transcript251.chr8.nnic@NA	transcript251.chr8.nnic	NA	12755854	12757972	Gene ID= novel_gene_chr8_252 TPM= 1.93 Transcript Type= NA
chr8	12951558	13024759	12951558	13024759	+	transcript255.chr8.nic@KIAA1456	transcript255.chr8.nic	protein_coding	12951558,12990834,13006202,13012684,13021008	12952358,12991000,13006356,13012857,13024759	Gene ID= ENSG00000250305.8 TPM= 2.9 Transcript Type= NA
chr8	13085189	13133474	13085189	13133474	-	ENST00000358919.6@DLC1	ENST00000358919.6	protein_coding	13132944,13115586,13110742,13102790,13099347,13098399,13095086,13094759,13092612,13091318,13090252,13088487,13086290,13085189	13133474,13115657,13110823,13102853,13100770,13098575,13095245,13094957,13092825,13091432,13090470,13088704,13086463,13085931	Gene ID= ENSG00000164741.14 TPM= 4.83 Transcript Type= protein_coding
chr8	15540283	15764459	15540283	15764459	+	ENST00000503731.5@TUSC3	ENST00000503731.5	protein_coding	15540283,15623080,15650697,15659507,15662156,15673747,15730666,15743538,15748375,15757791,15764203	15540568,15623249,15650814,15659647,15662296,15673836,15730729,15743612,15748465,15757855,15764459	Gene ID= ENSG00000104723.20 TPM= 1.93 Transcript Type= protein_coding
chr8	17026454	17027181	17026454	17027181	-	transcript262.chr8.nnic@NA	transcript262.chr8.nnic	NA	17026454	17027181	Gene ID= novel_gene_chr8_263 TPM= 3.86 Transcript Type= NA
chr8	17027238	17122644	17027238	17122644	+	ENST00000318063.9@MICU3	ENST00000318063.9	protein_coding	17027238,17064084,17069688,17077783,17081693,17085236,17086964,17090546,17098458,17104391,17105413,17114093,17116443,17118707,17120288	17027660,17064237,17069719,17077861,17081740,17085318,17087035,17090584,17098553,17104491,17105584,17114201,17116600,17118775,17122644	Gene ID= ENSG00000155970.11 TPM= 1.93 Transcript Type= protein_coding
chr8	17230531	17247592	17230531	17247592	-	transcript339.chr8.nnic@CNOT7	transcript339.chr8.nnic	protein_coding	17247484,17245036,17242992,17237212,17234716,17232427,17230531	17247592,17245247,17243185,17237373,17234860,17232537,17230848	Gene ID= ENSG00000198791.11 TPM= 2.9 Transcript Type= NA
chr8	17246571	17298024	17246571	17298024	+	ENST00000324849.8@VPS37A	ENST00000324849.8	protein_coding	17246571,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347,17294987	17247369,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286427,17298024	Gene ID= ENSG00000155975.9 TPM= 16.17 Transcript Type= protein_coding
chr8	17246939	17286611	17246939	17286611	+	transcript315.chr8.nic@VPS37A	transcript315.chr8.nic	protein_coding	17246939,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347	17247369,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286611	Gene ID= ENSG00000155975.9 TPM= 12.31 Transcript Type= NA
chr8	17291432	17292288	17291432	17292288	-	transcript347.chr8.nnic@NA	transcript347.chr8.nnic	NA	17291432	17292288	Gene ID= novel_gene_chr8_348 TPM= 1.93 Transcript Type= NA
chr8	17497060	17565976	17497060	17565976	+	transcript355.chr8.nic@SLC7A2	transcript355.chr8.nic	protein_coding	17497060,17502257,17543318,17544451,17548678,17550301,17551764,17554946,17558295,17560328,17561944,17563603,17564950	17497237,17502302,17543715,17544606,17548843,17550434,17551986,17555082,17558397,17560533,17562110,17563711,17565976	Gene ID= ENSG00000003989.17 TPM= 3.86 Transcript Type= NA
chr8	17497088	17565446	17497088	17565446	+	transcript362.chr8.nic@SLC7A2	transcript362.chr8.nic	protein_coding	17497088,17543318,17544451,17548678,17550301,17551764,17554946,17558295,17560328,17561944,17563603,17564950	17497237,17543715,17544606,17548843,17550434,17551986,17555082,17558397,17560533,17562110,17563711,17565446	Gene ID= ENSG00000003989.17 TPM= 7.24 Transcript Type= NA
chr8	17497060	17554147	17497060	17554147	+	transcript366.chr8.nnic@SLC7A2	transcript366.chr8.nnic	protein_coding	17497060,17502257,17543318,17544451,17548678,17550301,17551764,17552601	17497237,17502302,17543715,17544606,17548843,17550434,17552514,17554147	Gene ID= ENSG00000003989.17 TPM= 15.44 Transcript Type= NA
chr8	17497088	17554147	17497088	17554147	+	transcript370.chr8.nnic@SLC7A2	transcript370.chr8.nnic	protein_coding	17497088,17543318,17544451,17548678,17550301,17551764,17552601	17497237,17543715,17544606,17548843,17550434,17552514,17554147	Gene ID= ENSG00000003989.17 TPM= 7.24 Transcript Type= NA
chr8	17497060	17502339	17497060	17502339	+	transcript373.chr8.nic@SLC7A2	transcript373.chr8.nic	protein_coding	17497060,17502257	17497237,17502339	Gene ID= ENSG00000003989.17 TPM= 1.93 Transcript Type= NA
chr8	17555238	17557838	17555238	17557838	+	transcript374.chr8.nnic@NA	transcript374.chr8.nnic	NA	17555238	17557838	Gene ID= novel_gene_chr8_375 TPM= 1.93 Transcript Type= NA
chr8	17565795	17569337	17565795	17569337	+	transcript376.chr8.nnic@NA	transcript376.chr8.nnic	NA	17565795	17569337	Gene ID= novel_gene_chr8_377 TPM= 4.83 Transcript Type= NA
chr8	17577174	17643075	17577174	17643075	+	transcript378.chr8.nic@PDGFRL	transcript378.chr8.nic	protein_coding	17577174,17589468,17621051,17628487,17634074,17642613	17577307,17589765,17621202,17628780,17634213,17643075	Gene ID= ENSG00000104213.12 TPM= 12.55 Transcript Type= NA
chr8	17653212	17801283	17653212	17801283	-	transcript384.chr8.nnic@MTUS1	transcript384.chr8.nnic	protein_coding	17801061,17753717,17743604,17715767,17713214,17684328,17675186,17655863,17654561,17653425,17653212	17801283,17755961,17743799,17715901,17713252,17684542,17675252,17656065,17654666,17653498,17653281	Gene ID= ENSG00000129422.14 TPM= 6.76 Transcript Type= NA
chr8	17671911	17674087	17671911	17674087	-	transcript389.chr8.nnic@NA	transcript389.chr8.nnic	NA	17671911	17674087	Gene ID= novel_gene_chr8_390 TPM= 1.93 Transcript Type= NA
chr8	17922809	18027758	17922809	18027758	+	transcript397.chr8.nnic@PCM1	transcript397.chr8.nnic	protein_coding	17922809,17924713,17934706,17935134,17935589,17937134,17938740,17939691,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17985447,17985959,17989859,17991542,17993483,18006263,18009547,18010609,18011237,18011667,18013964,18014584,18025361,18025544,18027637	17923188,17924780,17934858,17935317,17935706,17937379,17939009,17939861,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17985619,17986087,17989979,17991700,17993619,18006397,18009744,18010668,18011366,18011827,18014036,18014840,18025453,18025658,18027758	Gene ID= ENSG00000078674.17 TPM= 6.92 Transcript Type= NA
chr8	17922985	18027758	17922985	18027758	+	transcript405.chr8.nic@PCM1	transcript405.chr8.nic	protein_coding	17922985,17924713,17935589,17937134,17938740,17939691,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17985447,17985959,17989859,17991542,17993483,18006263,18009547,18010609,18011237,18011667,18013964,18014584,18025361,18025544,18027637	17923188,17924780,17935706,17937379,17939009,17939861,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17985619,17986087,17989979,17991700,17993619,18006397,18009744,18010668,18011366,18011827,18014036,18014840,18025453,18025658,18027758	Gene ID= ENSG00000078674.17 TPM= 4.66 Transcript Type= NA
chr8	17922843	17980719	17922843	17980719	+	transcript416.chr8.nnic@PCM1	transcript416.chr8.nnic	protein_coding	17922843,17924713,17934706,17935134,17935589,17937134,17938740,17939691,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17980591	17923188,17924780,17934858,17935317,17935706,17937379,17939009,17939861,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17980719	Gene ID= ENSG00000078674.17 TPM= 3.54 Transcript Type= NA
chr8	18056459	18083408	18056459	18083408	-	ENST00000636691.1@ASAH1	ENST00000636691.1	protein_coding	18083122,18075541,18071300,18069792,18067220,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056459	18083408,18075587,18071390,18069878,18067298,18064531,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 2.9 Transcript Type= protein_coding
chr8	18056455	18084998	18056455	18084998	-	ENST00000381733.9@ASAH1	ENST00000381733.9	protein_coding	18084676,18075541,18071300,18069792,18067220,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056455	18084998,18075587,18071390,18069878,18067298,18064531,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 2.9 Transcript Type= protein_coding
chr8	19404161	19757259	19404161	19757259	-	transcript448.chr8.nic@CSGALNACT1	transcript448.chr8.nic	protein_coding	19757186,19601771,19505201,19458426,19439830,19420340,19418656,19408613,19404161	19757259,19601865,19506130,19458642,19439931,19420518,19418750,19408694,19406069	Gene ID= ENSG00000147408.14 TPM= 1.93 Transcript Type= NA
chr8	19817398	19852061	19817398	19852061	+	transcript449.chr8.nic@INTS10	transcript449.chr8.nic	protein_coding	19817398,19818275,19819573,19820379,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19849162,19851649	19817666,19818342,19819676,19820518,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19849239,19852061	Gene ID= ENSG00000104613.11 TPM= 3.62 Transcript Type= NA
chr8	19817140	19852078	19817140	19852078	+	ENST00000397977.7@INTS10	ENST00000397977.7	protein_coding	19817140,19818275,19819573,19820379,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19851649	19817666,19818342,19819676,19820518,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19852078	Gene ID= ENSG00000104613.11 TPM= 9.41 Transcript Type= protein_coding
chr8	19817398	19852061	19817398	19852061	+	transcript454.chr8.nic@INTS10	transcript454.chr8.nic	protein_coding	19817398,19818275,19819573,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19849162,19851649	19817666,19818342,19819676,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19849239,19852061	Gene ID= ENSG00000104613.11 TPM= 2.65 Transcript Type= NA
chr8	19817398	19852067	19817398	19852067	+	transcript458.chr8.nic@INTS10	transcript458.chr8.nic	protein_coding	19817398,19818275,19819573,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19851649	19817666,19818342,19819676,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19852067	Gene ID= ENSG00000104613.11 TPM= 8.45 Transcript Type= NA
chr8	19938971	19967258	19938971	19967258	+	ENST00000311322.8@LPL	ENST00000311322.8	protein_coding	19938971,19948180,19951769,19953310,19954120,19955841,19959260,19960901,19962115,19965310	19939528,19948340,19951948,19953421,19954353,19956083,19959380,19961083,19962219,19967258	Gene ID= ENSG00000175445.14 TPM= 41.51 Transcript Type= protein_coding
chr8	20197367	20221701	20197367	20221701	+	ENST00000276390.6@ATP6V1B2	ENST00000276390.6	protein_coding	20197367,20204484,20209433,20210346,20210569,20211177,20211652,20212102,20212782,20214818,20216413,20217220,20218153,20220263	20197542,20204539,20209531,20210439,20210646,20211316,20211753,20212199,20212905,20214968,20216495,20217324,20218282,20221701	Gene ID= ENSG00000147416.10 TPM= 164.1 Transcript Type= protein_coding
chr8	21919671	22006585	21919671	22006585	+	ENST00000252512.13@XPO7	ENST00000252512.13	protein_coding	21919671,21966857,21969483,21970144,21971876,21974670,21976356,21977770,21980084,21981731,21982640,21984646,21985586,21987141,21987784,21989003,21990344,21990811,21991868,21994363,21995492,21998755,21999091,21999536,22002112,22003219,22003903,22004995	21919788,21967003,21969576,21970310,21971941,21974774,21976521,21977843,21980203,21981877,21982812,21984839,21985691,21987276,21987857,21989083,21990407,21990919,21991974,21994451,21995599,21998837,21999305,21999674,22002272,22003317,22004030,22006585	Gene ID= ENSG00000130227.16 TPM= 1.93 Transcript Type= protein_coding
chr8	22048994	22082524	22048994	22082524	+	transcript482.chr8.nic@DMTN	transcript482.chr8.nic	protein_coding	22048994,22066705,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 5.63 Transcript Type= NA
chr8	22048992	22082524	22048992	22082524	+	transcript483.chr8.nic@DMTN	transcript483.chr8.nic	protein_coding	22048992,22066705,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22080805,22081113,22081350	22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 10.14 Transcript Type= NA
chr8	22048910	22082524	22048910	22082524	+	transcript485.chr8.nic@DMTN	transcript485.chr8.nic	protein_coding	22048910,22066705,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 11.42 Transcript Type= NA
chr8	22048965	22082524	22048965	22082524	+	transcript489.chr8.nic@DMTN	transcript489.chr8.nic	protein_coding	22048965,22066838,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 4.18 Transcript Type= NA
chr8	22048912	22082524	22048912	22082524	+	transcript490.chr8.nnic@DMTN	transcript490.chr8.nnic	protein_coding	22048912,22066838,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080805,22081113,22081350	22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 2.9 Transcript Type= NA
chr8	22049012	22082524	22049012	22082524	+	transcript491.chr8.nic@DMTN	transcript491.chr8.nic	protein_coding	22049012,22066705,22067527,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067682,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 5.31 Transcript Type= NA
chr8	22092567	22095227	22092567	22095227	-	transcript503.chr8.nnic@NA	transcript503.chr8.nnic	NA	22092567	22095227	Gene ID= novel_gene_chr8_504 TPM= 1.93 Transcript Type= NA
chr8	22102538	22105407	22102538	22105407	+	transcript501.chr8.nnic@NA	transcript501.chr8.nnic	NA	22102538	22105407	Gene ID= novel_gene_chr8_502 TPM= 1.93 Transcript Type= NA
chr8	22106872	22109397	22106872	22109397	-	ENST00000611621.1@NUDT18	ENST00000611621.1	protein_coding	22109139,22108133,22106872	22109397,22108346,22107895	Gene ID= ENSG00000275074.1 TPM= 6.76 Transcript Type= protein_coding
chr8	22138020	22141951	22138020	22141951	-	ENST00000306306.7@REEP4	ENST00000306306.7	protein_coding	22141451,22140625,22140172,22139963,22139416,22138926,22138639,22138020	22141951,22140697,22140248,22140083,22139529,22139061,22138793,22138552	Gene ID= ENSG00000168476.11 TPM= 1.93 Transcript Type= protein_coding
chr8	22165390	22201482	22165390	22201482	+	transcript510.chr8.nic@BMP1	transcript510.chr8.nic	protein_coding	22165390,22173602,22176143,22176533,22176924,22177567,22177852,22179705,22180368,22192049,22194058,22194445,22194724,22195462,22196680,22197240,22201118	22165553,22173715,22176313,22176650,22177139,22177732,22177957,22179829,22180483,22192151,22194174,22194590,22194919,22195587,22196840,22197420,22201482	Gene ID= ENSG00000168487.17 TPM= 2.9 Transcript Type= NA
chr8	22245235	22254600	22245235	22254600	+	ENST00000397802.8@POLR3D	ENST00000397802.8	protein_coding	22245235,22247221,22247857,22248154,22248481,22249044,22250075,22250396	22245614,22247264,22248008,22248278,22248649,22249309,22250227,22254600	Gene ID= ENSG00000168495.12 TPM= 37.65 Transcript Type= protein_coding
chr8	22245104	22251167	22245104	22251167	+	ENST00000306433.8@POLR3D	ENST00000306433.8	protein_coding	22245104,22245445,22247221,22247857,22248154,22248481,22249044,22250075,22250396	22245183,22245614,22247264,22248008,22248278,22248649,22249309,22250227,22251167	Gene ID= ENSG00000168495.12 TPM= 50.2 Transcript Type= protein_coding
chr8	22275297	22357563	22275297	22357563	+	ENST00000356766.10@PIWIL2	ENST00000356766.10	protein_coding	22275297,22279341,22281120,22281377,22283034,22284162,22287528,22288542,22289847,22290233,22304021,22304784,22305927,22307933,22309961,22311112,22314328,22315029,22316245,22318170,22352959,22354271,22355349	22275398,22279584,22281207,22281515,22283240,22284272,22287645,22288666,22289927,22290346,22304209,22304868,22306016,22308073,22310074,22311300,22314429,22315145,22316333,22318275,22353212,22354378,22357563	Gene ID= ENSG00000197181.11 TPM= 1.93 Transcript Type= protein_coding
chr8	22275337	22356071	22275337	22356071	+	ENST00000521356.5@PIWIL2	ENST00000521356.5	protein_coding	22275337,22279341,22281120,22281377,22283034,22284162,22287528,22288542,22289847,22290233,22304021,22304784,22305927,22307933,22309961,22311112,22314328,22315029,22316245,22318170,22352959,22355349	22275398,22279584,22281207,22281515,22283240,22284272,22287645,22288666,22289927,22290346,22304209,22304868,22306016,22308073,22310074,22311300,22314429,22315145,22316333,22318275,22353212,22356071	Gene ID= ENSG00000197181.11 TPM= 1.93 Transcript Type= protein_coding
chr8	22392884	22422685	22392884	22422685	+	transcript534.chr8.nic@SLC39A14	transcript534.chr8.nic	protein_coding	22392884,22404696,22408310,22412037,22414780,22415769,22416073,22417651,22419552	22393232,22404980,22408496,22412206,22414902,22415957,22416280,22417835,22422685	Gene ID= ENSG00000104635.13 TPM= 7.24 Transcript Type= NA
chr8	22367305	22422741	22367305	22422741	+	ENST00000381237.5@SLC39A14	ENST00000381237.5	protein_coding	22367305,22404696,22408310,22412037,22414780,22415769,22416073,22417651,22419552	22367408,22404980,22408496,22412206,22414902,22415957,22416280,22417835,22422741	Gene ID= ENSG00000104635.13 TPM= 8.69 Transcript Type= protein_coding
chr8	22440746	22541125	22440746	22541125	+	transcript541.chr8.nnic@PPP3CC	transcript541.chr8.nnic	protein_coding	22440746,22474954,22475500,22498001,22511086,22513293,22522491,22522655,22523643,22527392,22528506,22531302,22532225,22532921,22539469,22540615	22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522749,22523756,22527517,22528577,22531328,22532306,22533018,22539498,22541125	Gene ID= ENSG00000120910.14 TPM= 9.72 Transcript Type= NA
chr8	22441054	22541139	22441054	22541139	+	transcript543.chr8.nnic@PPP3CC	transcript543.chr8.nnic	protein_coding	22441054,22474954,22475500,22498001,22511086,22513293,22522491,22522655,22527392,22528506,22531302,22532225,22532921,22539469,22539732,22540615	22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522749,22527517,22528577,22531328,22532306,22533018,22539498,22539936,22541139	Gene ID= ENSG00000120910.14 TPM= 8.76 Transcript Type= NA
chr8	22441051	22479158	22441051	22479158	+	transcript579.chr8.nnic@PPP3CC	transcript579.chr8.nnic	protein_coding	22441051,22474954,22475500,22477647	22441458,22475151,22475624,22479158	Gene ID= ENSG00000120910.14 TPM= 5.79 Transcript Type= NA
chr8	22441083	22541125	22441083	22541125	+	ENST00000240139.9@PPP3CC	ENST00000240139.9	protein_coding	22441083,22474954,22475500,22498001,22511086,22513293,22522491,22522655,22527392,22528506,22532225,22532921,22539469,22540615	22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522749,22527517,22528577,22532306,22533018,22539498,22541125	Gene ID= ENSG00000120910.14 TPM= 4.51 Transcript Type= protein_coding
chr8	22441074	22443197	22441074	22443197	+	transcript589.chr8.nnic@NA	transcript589.chr8.nnic	NA	22441074	22443197	Gene ID= novel_gene_chr8_590 TPM= 5.79 Transcript Type= NA
chr8	22446749	22447001	22446749	22447001	-	transcript593.chr8.nnic@NA	transcript593.chr8.nnic	NA	22446749	22447001	Gene ID= novel_gene_chr8_594 TPM= 1.93 Transcript Type= NA
chr8	22464978	22468247	22464978	22468247	-	transcript591.chr8.nnic@NA	transcript591.chr8.nnic	NA	22464978	22468247	Gene ID= novel_gene_chr8_592 TPM= 2.9 Transcript Type= NA
chr8	22565678	22575495	22565678	22575495	+	ENST00000523965.5@SORBS3	ENST00000523965.5	protein_coding	22565678,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667	22565872,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575495	Gene ID= ENSG00000120896.13 TPM= 16.41 Transcript Type= protein_coding
chr8	22599601	22604133	22599601	22604133	+	ENST00000409586.7@C8orf58	ENST00000409586.7	protein_coding	22599601,22600882,22601712,22601972,22602200,22602561,22603195	22599760,22601357,22601852,22602080,22602312,22602643,22604133	Gene ID= ENSG00000241852.9 TPM= 5.79 Transcript Type= protein_coding
chr8	22599601	22604150	22599601	22604150	+	ENST00000614574.4@C8orf58	ENST00000614574.4	protein_coding	22599601,22600882,22601712,22601972,22602200,22603195	22599760,22601357,22601852,22602080,22602312,22604150	Gene ID= ENSG00000241852.9 TPM= 1.93 Transcript Type= protein_coding
chr8	22599599	22604133	22599599	22604133	+	transcript614.chr8.nic@C8orf58	transcript614.chr8.nic	protein_coding	22599599,22600882,22601712,22601972,22602537,22603195	22599760,22601357,22601852,22602312,22602643,22604133	Gene ID= ENSG00000241852.9 TPM= 1.93 Transcript Type= NA
chr8	22599647	22604150	22599647	22604150	+	ENST00000289989.9@C8orf58	ENST00000289989.9	protein_coding	22599647,22600882,22601712,22601972,22602200,22602537,22603195	22599760,22601357,22601852,22602080,22602312,22602643,22604150	Gene ID= ENSG00000241852.9 TPM= 1.93 Transcript Type= protein_coding
chr8	22604632	22621514	22604632	22621514	+	ENST00000308511.8@CCAR2	ENST00000308511.8	protein_coding	22604632,22605736,22606085,22606607,22606910,22607196,22607969,22613017,22614092,22614390,22614838,22615425,22615682,22616012,22617420,22617696,22618349,22618617,22618827,22619150,22619638	22604842,22605831,22606176,22606698,22607024,22607325,22608065,22613136,22614314,22614503,22615001,22615596,22615912,22616248,22617564,22617778,22618495,22618728,22619015,22619355,22621514	Gene ID= ENSG00000158941.16 TPM= 5.31 Transcript Type= protein_coding
chr8	22605038	22620471	22605038	22620471	+	ENST00000389279.7@CCAR2	ENST00000389279.7	protein_coding	22605038,22605736,22606085,22606607,22606910,22607196,22607969,22613017,22614092,22614390,22614838,22615425,22615682,22616012,22617420,22617696,22618349,22618617,22618827,22619150,22619638	22605418,22605831,22606176,22606698,22607024,22607325,22608065,22613136,22614314,22614503,22615001,22615596,22615912,22616248,22617564,22617778,22618495,22618728,22619015,22619355,22620471	Gene ID= ENSG00000158941.16 TPM= 32.34 Transcript Type= protein_coding
chr8	22613506	22616508	22613506	22616508	-	transcript642.chr8.nnic@NA	transcript642.chr8.nnic	NA	22613506	22616508	Gene ID= novel_gene_chr8_643 TPM= 1.93 Transcript Type= NA
chr8	22620713	22669093	22620713	22669093	-	transcript635.chr8.nic@BIN3	transcript635.chr8.nic	protein_coding	22669044,22644755,22636922,22636525,22630442,22629964,22624222,22623915,22622541,22620713	22669093,22644803,22636962,22636586,22630578,22630004,22624363,22624049,22622697,22621568	Gene ID= ENSG00000147439.12 TPM= 4.83 Transcript Type= NA
chr8	22620712	22669128	22620712	22669128	-	transcript639.chr8.nic@BIN3	transcript639.chr8.nic	protein_coding	22669044,22644755,22636922,22630442,22629964,22624222,22623915,22620712	22669128,22644803,22636962,22630578,22630004,22624363,22624049,22621568	Gene ID= ENSG00000147439.12 TPM= 3.86 Transcript Type= NA
chr8	22620418	22669120	22620418	22669120	-	ENST00000276416.10@BIN3	ENST00000276416.10	protein_coding	22669044,22644755,22636922,22636525,22630442,22629964,22624222,22623915,22620418	22669120,22644803,22636962,22636586,22630578,22630004,22624363,22624049,22621568	Gene ID= ENSG00000147439.12 TPM= 1.93 Transcript Type= protein_coding
chr8	22620712	22669113	22620712	22669113	-	ENST00000519513.5@BIN3	ENST00000519513.5	protein_coding	22669044,22644755,22630442,22629964,22624222,22623915,22620712	22669113,22644803,22630578,22630004,22624363,22624049,22621568	Gene ID= ENSG00000147439.12 TPM= 7.72 Transcript Type= protein_coding
chr8	22687728	22690274	22687728	22690274	-	transcript644.chr8.nnic@NA	transcript644.chr8.nnic	NA	22687728	22690274	Gene ID= novel_gene_chr8_645 TPM= 3.86 Transcript Type= NA
chr8	22926682	22927894	22926682	22927894	-	transcript655.chr8.nnic@PEBP4	transcript655.chr8.nnic	protein_coding	22927823,22927584,22926682	22927894,22927720,22927052	Gene ID= ENSG00000134020.7 TPM= 5.79 Transcript Type= NA
chr8	22713251	22927908	22713251	22927908	-	ENST00000256404.7@PEBP4	ENST00000256404.7	protein_coding	22927823,22927584,22920184,22817637,22727175,22724843,22713251	22927908,22927720,22920310,22817735,22727220,22724956,22713536	Gene ID= ENSG00000134020.7 TPM= 202.72 Transcript Type= protein_coding
chr8	22865246	22866720	22865246	22866720	+	transcript657.chr8.nnic@NA	transcript657.chr8.nnic	NA	22865246	22866720	Gene ID= novel_gene_chr8_658 TPM= 2.9 Transcript Type= NA
chr8	22999610	23020199	22999610	23020199	+	transcript661.chr8.nnic@RHOBTB2	transcript661.chr8.nnic	protein_coding	22999610,23004425,23005372,23005958,23006725,23007991,23010538,23014690,23015638,23017252	23000105,23004626,23005475,23006145,23007746,23008111,23010688,23014778,23015743,23020199	Gene ID= ENSG00000008853.16 TPM= 16.89 Transcript Type= NA
chr8	22999579	23020199	22999579	23020199	+	ENST00000251822.6@RHOBTB2	ENST00000251822.6	protein_coding	22999579,23004425,23005372,23005960,23006728,23007993,23010538,23014690,23015638,23017252	23000105,23004626,23005475,23006145,23007746,23008111,23010688,23014778,23015743,23020199	Gene ID= ENSG00000008853.16 TPM= 62.26 Transcript Type= protein_coding
chr8	23022444	23069059	23022444	23069059	-	transcript664.chr8.nnic@TNFRSF10B	transcript664.chr8.nnic	protein_coding	23068751,23043138,23030759,23029610,23028529,23028331,23027722,23027133,23024188,23022444	23069059,23043243,23030872,23029721,23028602,23028441,23027753,23027288,23024260,23022954	Gene ID= ENSG00000120889.12 TPM= 1.93 Transcript Type= NA
chr8	23020133	23069179	23020133	23069179	-	ENST00000276431.8@TNFRSF10B	ENST00000276431.8	protein_coding	23068751,23043138,23030759,23029610,23028331,23027722,23027133,23024188,23020133	23069179,23043243,23030872,23029721,23028602,23027753,23027288,23024260,23022984	Gene ID= ENSG00000120889.12 TPM= 5.79 Transcript Type= protein_coding
chr8	23246620	23261992	23246620	23261992	+	transcript672.chr8.nnic@CHMP7	transcript672.chr8.nnic	protein_coding	23246620,23249210,23249797,23255247,23256460,23258033,23258330,23258732,23259066,23260144,23260538	23246824,23249381,23249879,23255432,23256593,23258081,23258449,23258830,23259126,23260323,23261992	Gene ID= ENSG00000147457.13 TPM= 4.39 Transcript Type= NA
chr8	23246616	23261992	23246616	23261992	+	transcript677.chr8.nic@CHMP7	transcript677.chr8.nic	protein_coding	23246616,23249210,23255247,23256460,23258033,23258330,23258732,23260144,23260538	23246994,23249381,23255432,23256593,23258081,23258449,23258830,23260323,23261992	Gene ID= ENSG00000147457.13 TPM= 4.63 Transcript Type= NA
chr8	23246616	23261992	23246616	23261992	+	transcript678.chr8.nnic@CHMP7	transcript678.chr8.nnic	protein_coding	23246616,23249210,23255247,23256460,23258033,23258732,23259066,23260144,23260538	23246994,23249381,23255432,23256593,23258081,23258830,23259126,23260323,23261992	Gene ID= ENSG00000147457.13 TPM= 3.43 Transcript Type= NA
chr8	23246636	23261992	23246636	23261992	+	transcript679.chr8.nic@CHMP7	transcript679.chr8.nic	protein_coding	23246636,23255247,23256460,23258033,23258330,23258732,23259066,23260144,23260538	23246994,23255432,23256593,23258081,23258449,23258830,23259126,23260323,23261992	Gene ID= ENSG00000147457.13 TPM= 3.43 Transcript Type= NA
chr8	23246642	23261992	23246642	23261992	+	ENST00000517325.5@CHMP7	ENST00000517325.5	protein_coding	23246642,23249210,23255247,23256460,23258033,23258330,23258732,23259066,23260144,23260538	23246824,23249381,23255432,23256593,23258081,23258449,23258830,23259126,23260323,23261992	Gene ID= ENSG00000147457.13 TPM= 9.22 Transcript Type= nonsense_mediated_decay
chr8	23252197	23254059	23252197	23254059	-	transcript682.chr8.nnic@NA	transcript682.chr8.nnic	NA	23252197	23254059	Gene ID= novel_gene_chr8_683 TPM= 1.93 Transcript Type= NA
chr8	23287908	23296279	23287908	23296279	+	ENST00000265806.10@R3HCC1	ENST00000265806.10	protein_coding	23287908,23288506,23289016,23289866,23291361,23293303,23294769,23295967	23288157,23288633,23289153,23290469,23291533,23293373,23294864,23296279	Gene ID= ENSG00000104679.10 TPM= 166.35 Transcript Type= protein_coding
chr8	23297189	23404240	23297189	23404240	-	ENST00000389131.7@LOXL2	ENST00000389131.7	protein_coding	23403954,23367997,23360090,23340992,23333401,23328382,23322130,23319885,23316949,23309668,23303282,23302027,23298836,23297189	23404240,23368434,23360265,23341203,23333623,23328565,23322281,23320052,23317114,23309911,23303397,23302163,23298947,23298122	Gene ID= ENSG00000134013.15 TPM= 4.83 Transcript Type= protein_coding
chr8	23429152	23457695	23429152	23457695	-	ENST00000358689.8@ENTPD4	ENST00000358689.8	protein_coding	23457557,23449893,23448742,23447680,23444456,23443850,23442007,23441569,23439749,23436934,23435392,23434317,23429152	23457695,23449997,23448939,23447885,23444606,23443953,23442066,23441723,23439915,23437258,23435477,23434478,23433154	Gene ID= ENSG00000197217.12 TPM= 13.51 Transcript Type= protein_coding
chr8	23454713	23457652	23454713	23457652	-	transcript710.chr8.nnic@NA	transcript710.chr8.nnic	NA	23454713	23457652	Gene ID= novel_gene_chr8_711 TPM= 1.93 Transcript Type= NA
chr8	23528863	23572221	23528863	23572221	+	transcript714.chr8.nic@SLC25A37	transcript714.chr8.nic	protein_coding	23528863,23566108,23568322,23571335	23529212,23566940,23568378,23572221	Gene ID= ENSG00000147454.13 TPM= 2.9 Transcript Type= NA
chr8	23567827	23573329	23567827	23573329	+	transcript721.chr8.nic@SLC25A37	transcript721.chr8.nic	protein_coding	23567827,23571335	23568378,23573329	Gene ID= ENSG00000147454.13 TPM= 19.31 Transcript Type= NA
chr8	23528956	23572203	23528956	23572203	+	ENST00000290075.10@SLC25A37	ENST00000290075.10	protein_coding	23528956,23566108,23568322,23571335	23529212,23566813,23568378,23572203	Gene ID= ENSG00000147454.13 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr8	23678693	23682927	23678693	23682927	-	ENST00000380871.4@NKX3-1	ENST00000380871.4	protein_coding	23682604,23678693	23682927,23681639	Gene ID= ENSG00000167034.9 TPM= 13.51 Transcript Type= protein_coding
chr8	24913012	24919093	24913012	24919093	+	ENST00000221166.9@NEFM	ENST00000221166.9	protein_coding	24913012,24915605,24917061	24914873,24915729,24919093	Gene ID= ENSG00000104722.13 TPM= 2.9 Transcript Type= protein_coding
chr8	25428023	25458422	25428023	25458422	-	transcript736.chr8.nic@KCTD9	transcript736.chr8.nic	protein_coding	25458199,25440577,25439606,25439279,25436418,25436235,25435363,25433330,25432504,25428023	25458422,25440673,25439664,25439407,25436485,25436330,25435512,25433435,25432637,25429973	Gene ID= ENSG00000104756.15 TPM= 3.86 Transcript Type= NA
chr8	25427847	25458467	25427847	25458467	-	ENST00000221200.8@KCTD9	ENST00000221200.8	protein_coding	25458199,25446129,25444292,25440577,25439606,25439279,25436418,25436235,25435363,25433330,25432504,25427847	25458467,25446250,25444335,25440673,25439664,25439407,25436485,25436330,25435512,25433435,25432637,25429973	Gene ID= ENSG00000104756.15 TPM= 2.9 Transcript Type= protein_coding
chr8	25841730	26045397	25841730	26045397	-	ENST00000520164.5@EBF2	ENST00000520164.5	protein_coding	26044729,26042095,26040939,26040616,26040028,26033085,25908474,25889752,25887842,25886755,25862709,25861309,25861049,25858319,25850594,25841730	26045397,26042251,26041002,26040671,26040101,26033153,25908555,25889869,25887972,25886881,25862797,25861374,25861226,25858504,25850761,25844640	Gene ID= ENSG00000221818.8 TPM= 1.93 Transcript Type= protein_coding
chr8	26291491	26372680	26291491	26372680	+	ENST00000380737.7@PPP2R2A	ENST00000380737.7	protein_coding	26291491,26293666,26338890,26354468,26360169,26360974,26362684,26363721,26366315,26370134	26291826,26293740,26338987,26354633,26360281,26361151,26362848,26363890,26366406,26372680	Gene ID= ENSG00000221914.9 TPM= 9.65 Transcript Type= protein_coding
chr8	26382898	26413129	26382898	26413129	+	ENST00000380629.6@BNIP3L	ENST00000380629.6	protein_coding	26382898,26391243,26395230,26408000,26408227,26410364	26383230,26391426,26395302,26408103,26408376,26413129	Gene ID= ENSG00000104765.15 TPM= 22.2 Transcript Type= protein_coding
chr8	26577843	26658178	26577843	26658178	+	ENST00000311151.9@DPYSL2	ENST00000311151.9	protein_coding	26577843,26581969,26583799,26624143,26626617,26627215,26627872,26634780,26643439,26643950,26647630,26652257,26653232,26655615	26578293,26582057,26583983,26624307,26626678,26627295,26627940,26634900,26643595,26644091,26647800,26652436,26653397,26658178	Gene ID= ENSG00000092964.17 TPM= 53.09 Transcript Type= protein_coding
chr8	27284887	27311319	27284887	27311319	-	ENST00000305364.8@TRIM35	ENST00000305364.8	protein_coding	27310801,27298464,27294080,27290156,27289162,27284887	27311319,27298559,27294310,27290178,27289280,27288127	Gene ID= ENSG00000104228.12 TPM= 2.9 Transcript Type= protein_coding
chr8	27490779	27545564	27490779	27545564	+	ENST00000521400.5@EPHX2	ENST00000521400.5	protein_coding	27490779,27500926,27503604,27504956,27506872,27511836,27515718,27516320,27518038,27520883,27522423,27525362,27536784,27538659,27540554,27541473,27543749,27544186,27544444	27491309,27501010,27503763,27505146,27506994,27511910,27515813,27516398,27518072,27520909,27522508,27525473,27536855,27538692,27540656,27541542,27543829,27544244,27545564	Gene ID= ENSG00000120915.13 TPM= 8.69 Transcript Type= protein_coding
chr8	27596917	27615031	27596917	27615031	-	ENST00000316403.14@CLU	ENST00000316403.14	protein_coding	27614655,27610475,27608938,27606354,27604924,27604291,27599780,27598460,27596917	27615031,27610600,27609086,27606524,27605335,27604395,27600009,27598635,27598250	Gene ID= ENSG00000120885.21 TPM= 21.24 Transcript Type= protein_coding
chr8	27733318	27772653	27733318	27772653	-	ENST00000520486.5@CCDC25	ENST00000520486.5	protein_coding	27772513,27765204,27762419,27752512,27748495,27748077,27740472,27733318	27772653,27765251,27762458,27752587,27748598,27748279,27740517,27736245	Gene ID= ENSG00000147419.17 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr8	27748125	27772649	27748125	27772649	-	transcript792.chr8.nic@CCDC25	transcript792.chr8.nic	protein_coding	27772513,27765204,27762419,27756719,27752512,27748495,27748125	27772649,27765251,27762458,27756770,27752587,27748598,27748279	Gene ID= ENSG00000147419.17 TPM= 10.62 Transcript Type= NA
chr8	27748125	27772649	27748125	27772649	-	transcript795.chr8.nic@CCDC25	transcript795.chr8.nic	protein_coding	27772513,27765204,27762419,27756719,27752512,27748125	27772649,27765251,27762458,27756770,27752587,27748279	Gene ID= ENSG00000147419.17 TPM= 8.69 Transcript Type= NA
chr8	27748125	27772649	27748125	27772649	-	transcript796.chr8.nic@CCDC25	transcript796.chr8.nic	protein_coding	27772513,27765204,27762419,27752512,27748125	27772649,27765251,27762458,27752587,27748279	Gene ID= ENSG00000147419.17 TPM= 3.86 Transcript Type= NA
chr8	27733311	27772634	27733311	27772634	-	ENST00000356537.8@CCDC25	ENST00000356537.8	protein_coding	27772513,27765204,27762419,27756719,27752512,27748495,27748077,27740472,27733311	27772634,27765251,27762458,27756770,27752587,27748598,27748279,27740517,27736245	Gene ID= ENSG00000147419.17 TPM= 9.65 Transcript Type= protein_coding
chr8	27735052	27772639	27735052	27772639	-	ENST00000520202.5@CCDC25	ENST00000520202.5	protein_coding	27772513,27765204,27762419,27752512,27748077,27740472,27735052	27772639,27765251,27762458,27752587,27748279,27740517,27736245	Gene ID= ENSG00000147419.17 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr8	27870236	27977126	27870236	27977126	-	transcript798.chr8.nnic@SCARA5	transcript798.chr8.nnic	protein_coding	27977030,27966414,27921571,27909663,27907148,27904778,27879569,27870236	27977126,27966542,27922245,27909743,27907246,27904834,27879766,27872070	Gene ID= ENSG00000168079.16 TPM= 7.72 Transcript Type= NA
chr8	27869882	27992727	27869882	27992727	-	ENST00000354914.7@SCARA5	ENST00000354914.7	protein_coding	27992257,27987504,27966414,27921571,27909663,27907148,27904778,27879569,27869882	27992727,27987630,27966542,27922245,27909743,27907246,27904834,27879766,27872070	Gene ID= ENSG00000168079.16 TPM= 5.79 Transcript Type= protein_coding
chr8	28092838	28191156	28092838	28191156	+	ENST00000256398.12@ELP3	ENST00000256398.12	protein_coding	28092838,28097219,28099828,28106713,28107913,28110370,28113019,28129502,28132278,28137698,28155942,28158568,28160229,28161997,28189649	28093233,28097318,28099966,28106783,28107976,28110438,28113173,28129663,28132404,28137891,28156032,28158633,28160456,28162078,28191156	Gene ID= ENSG00000134014.16 TPM= 55.99 Transcript Type= protein_coding
chr8	28093067	28191150	28093067	28191150	+	ENST00000380353.8@ELP3	ENST00000380353.8	protein_coding	28093067,28097219,28106713,28107913,28110370,28113019,28129502,28132278,28137698,28155942,28158568,28160229,28161997,28189649	28093233,28097318,28106783,28107976,28110438,28113173,28129663,28132404,28137891,28156032,28158633,28160456,28162078,28191150	Gene ID= ENSG00000134014.16 TPM= 3.86 Transcript Type= protein_coding
chr8	28345765	28347151	28345765	28347151	-	transcript813.chr8.nnic@NA	transcript813.chr8.nnic	NA	28345765	28347151	Gene ID= novel_gene_chr8_814 TPM= 2.9 Transcript Type= NA
chr8	28701327	28753687	28701327	28753687	+	ENST00000220562.8@EXTL3	ENST00000220562.8	protein_coding	28701327,28713457,28715585,28731223,28737519,28743086,28750657	28701659,28713550,28718207,28731350,28737663,28743214,28753687	Gene ID= ENSG00000012232.8 TPM= 37.65 Transcript Type= protein_coding
chr8	28701592	28751206	28701592	28751206	+	transcript825.chr8.nnic@EXTL3	transcript825.chr8.nnic	protein_coding	28701592,28715585,28731223,28737519,28743086,28750657	28701659,28718207,28731350,28737663,28743214,28751206	Gene ID= ENSG00000012232.8 TPM= 4.83 Transcript Type= NA
chr8	28701591	28702527	28701591	28702527	+	transcript826.chr8.nnic@EXTL3	transcript826.chr8.nnic	protein_coding	28701591,28701965	28701659,28702527	Gene ID= ENSG00000012232.8 TPM= 1.93 Transcript Type= NA
chr8	28767665	28889975	28767665	28889975	-	transcript829.chr8.nnic@INTS9	transcript829.chr8.nnic	protein_coding	28889874,28859436,28850213,28846747,28837637,28835292,28813492,28812327,28796544,28793807,28787829,28780823,28777829,28775759,28770982,28769889,28767665	28889975,28859563,28850273,28846809,28837776,28835378,28813612,28812461,28796655,28793987,28787889,28780994,28777953,28775926,28771080,28770026,28769112	Gene ID= ENSG00000104299.14 TPM= 2.9 Transcript Type= NA
chr8	28767661	28890242	28767661	28890242	-	ENST00000416984.6@INTS9	ENST00000416984.6	protein_coding	28889874,28859436,28850213,28837637,28835292,28813492,28812327,28796544,28793807,28787829,28780823,28777829,28775759,28770982,28769889,28767661	28890242,28859563,28850273,28837776,28835378,28813612,28812461,28796655,28793987,28787889,28780994,28777953,28775926,28771080,28770026,28768322	Gene ID= ENSG00000104299.14 TPM= 1.93 Transcript Type= protein_coding
chr8	28811129	28889975	28811129	28889975	-	transcript833.chr8.nic@INTS9	transcript833.chr8.nic	protein_coding	28889874,28859436,28850213,28846747,28837637,28835292,28811129	28889975,28859563,28850273,28846809,28837776,28835378,28813612	Gene ID= ENSG00000104299.14 TPM= 1.93 Transcript Type= NA
chr8	28767661	28889964	28767661	28889964	-	ENST00000521022.5@INTS9	ENST00000521022.5	protein_coding	28889874,28859436,28850213,28846747,28837637,28835292,28813492,28812327,28796544,28793807,28787829,28780823,28777829,28775759,28770982,28769889,28767661	28889964,28859563,28850273,28846809,28837776,28835378,28813612,28812461,28796655,28793987,28787889,28780994,28777953,28775926,28771080,28770026,28768322	Gene ID= ENSG00000104299.14 TPM= 18.34 Transcript Type= protein_coding
chr8	28890362	29051918	28890362	29051918	+	transcript836.chr8.nnic@HMBOX1	transcript836.chr8.nnic	protein_coding	28890362,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048954,29050202,29051018	28890678,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29050253,29051918	Gene ID= ENSG00000147421.17 TPM= 1.93 Transcript Type= NA
chr8	29061455	29064939	29061455	29064939	+	transcript840.chr8.nnic@NA	transcript840.chr8.nnic	NA	29061455	29064939	Gene ID= novel_gene_chr8_841 TPM= 2.9 Transcript Type= NA
chr8	29067279	29263073	29067279	29263073	-	ENST00000524189.5@KIF13B	ENST00000524189.5	protein_coding	29262980,29245346,29196187,29190997,29188515,29186292,29181919,29180104,29177466,29176068,29167373,29165662,29160733,29155726,29150297,29148577,29147392,29146378,29142157,29140468,29140063,29134040,29132308,29130533,29127122,29126482,29124024,29123366,29122591,29118868,29116831,29113463,29109918,29109434,29108139,29099133,29092745,29075281,29071620,29067279	29263073,29245439,29196199,29191057,29188607,29186472,29182006,29180238,29177578,29176179,29167585,29165772,29160867,29155856,29150383,29148767,29147602,29146540,29142303,29140617,29140191,29134210,29132465,29130665,29127268,29126511,29124123,29123492,29122646,29118992,29117007,29113555,29110070,29109511,29108192,29099241,29092878,29075343,29072316,29070766	Gene ID= ENSG00000197892.12 TPM= 12.55 Transcript Type= protein_coding
chr8	30063012	30083207	30063012	30083207	-	ENST00000256255.10@SARAF	ENST00000256255.10	protein_coding	30082847,30073877,30069642,30066777,30065988,30063012	30083207,30074055,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 138.04 Transcript Type= protein_coding
chr8	30063012	30083208	30063012	30083208	-	ENST00000545648.2@SARAF	ENST00000545648.2	protein_coding	30082847,30069642,30066777,30065988,30063012	30083208,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 43.44 Transcript Type= protein_coding
chr8	30063098	30083124	30063098	30083124	-	ENST00000518174.5@SARAF	ENST00000518174.5	protein_coding	30082847,30073877,30069642,30066777,30065988,30063098	30083124,30074051,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 141.9 Transcript Type= nonsense_mediated_decay
chr8	30095398	30108524	30095398	30108524	+	ENST00000321250.12@LEPROTL1	ENST00000321250.12	protein_coding	30095398,30101898,30104300,30105746	30095528,30101973,30104486,30108524	Gene ID= ENSG00000104660.17 TPM= 3.86 Transcript Type= protein_coding
chr8	30155830	30156232	30155830	30156232	-	ENST00000607315.1@AC026979.3	ENST00000607315.1	lincRNA	30155830	30156232	Gene ID= ENSG00000271869.1 TPM= 2.9 Transcript Type= lincRNA
chr8	30156297	30183640	30156297	30183640	+	ENST00000221114.7@DCTN6	ENST00000221114.7	protein_coding	30156297,30164111,30175085,30177126,30179408,30180488,30183075	30156406,30164175,30175190,30177214,30179455,30180630,30183640	Gene ID= ENSG00000104671.7 TPM= 18.34 Transcript Type= protein_coding
chr8	30384511	30547522	30384511	30547522	+	ENST00000339877.8@RBPMS	ENST00000339877.8	protein_coding	30384511,30474779,30477799,30479315,30504286,30544494,30547292	30385158,30474856,30477837,30479377,30504436,30544624,30547522	Gene ID= ENSG00000157110.15 TPM= 2.9 Transcript Type= protein_coding
chr8	30384479	30572261	30384479	30572261	+	ENST00000397323.8@RBPMS	ENST00000397323.8	protein_coding	30384479,30474779,30477799,30479315,30504286,30544494,30558887,30566257,30570637	30385158,30474856,30477837,30479377,30504436,30544624,30558956,30566360,30572261	Gene ID= ENSG00000157110.15 TPM= 1.93 Transcript Type= protein_coding
chr8	30678061	30727926	30678061	30727926	-	ENST00000221130.9@GSR	ENST00000221130.9	protein_coding	30727530,30712062,30709814,30708072,30703093,30700081,30696380,30692969,30689161,30684088,30681930,30680904,30678061	30727926,30712088,30709902,30708141,30703240,30700135,30696479,30693055,30689319,30684199,30682061,30681037,30679669	Gene ID= ENSG00000104687.12 TPM= 93.15 Transcript Type= protein_coding
chr8	30744165	30767006	30744165	30767006	+	ENST00000265616.9@UBXN8	ENST00000265616.9	protein_coding	30744165,30751396,30753035,30754665,30756765,30760888,30763273,30766227	30744277,30751518,30753105,30754787,30756887,30760929,30763347,30767006	Gene ID= ENSG00000104691.14 TPM= 2.9 Transcript Type= protein_coding
chr8	30785616	30812850	30785616	30812850	-	transcript891.chr8.nnic@PPP2CB	transcript891.chr8.nnic	protein_coding	30812320,30799546,30797581,30794192,30793917,30791197,30786432,30785616	30812850,30799755,30797754,30794281,30794078,30791315,30786494,30786307	Gene ID= ENSG00000104695.12 TPM= 2.9 Transcript Type= NA
chr8	30785610	30812872	30785610	30812872	-	ENST00000221138.8@PPP2CB	ENST00000221138.8	protein_coding	30812320,30799546,30797581,30794192,30793917,30791197,30785610	30812872,30799755,30797754,30794281,30794078,30791315,30786307	Gene ID= ENSG00000104695.12 TPM= 103.29 Transcript Type= protein_coding
chr8	31033801	31173769	31033801	31173769	+	ENST00000298139.5@WRN	ENST00000298139.5	protein_coding	31033801,31058372,31059153,31064289,31064915,31067033,31068258,31076173,31080867,31083699,31085166,31087776,31088890,31090465,31090834,31091830,31096768,31100849,31111615,31116354,31120243,31124522,31124908,31132365,31141430,31141681,31142626,31143550,31147053,31147364,31150341,31154624,31157368,31167022,31172995	31033973,31058543,31059265,31064434,31065063,31067182,31068327,31076287,31081296,31083779,31085246,31087920,31088965,31090532,31090942,31091898,31096850,31100955,31111799,31116528,31120424,31124623,31125000,31132506,31141600,31141775,31142701,31143623,31147128,31147476,31150455,31154755,31157530,31167230,31173769	Gene ID= ENSG00000165392.9 TPM= 1.93 Transcript Type= protein_coding
chr8	33498956	33513601	33498956	33513601	-	ENST00000431156.6@TTI2	ENST00000431156.6	protein_coding	33513082,33511967,33509746,33507229,33503748,33503429,33500328,33498956	33513601,33512712,33509932,33507321,33503935,33503572,33500490,33499277	Gene ID= ENSG00000129696.12 TPM= 4.83 Transcript Type= protein_coding
chr8	33499118	33513149	33499118	33513149	-	transcript913.chr8.nic@TTI2	transcript913.chr8.nic	protein_coding	33513082,33511967,33509746,33503748,33503429,33500328,33499118	33513149,33512712,33509932,33503935,33503572,33500490,33499277	Gene ID= ENSG00000129696.12 TPM= 1.93 Transcript Type= NA
chr8	33498954	33513109	33498954	33513109	-	ENST00000360742.9@TTI2	ENST00000360742.9	protein_coding	33511967,33509746,33507229,33503748,33503429,33500328,33498954	33513109,33509932,33507321,33503935,33503572,33500490,33499277	Gene ID= ENSG00000129696.12 TPM= 8.69 Transcript Type= protein_coding
chr8	33484750	33501260	33484750	33501260	+	ENST00000360128.10@MAK16	ENST00000360128.10	protein_coding	33484750,33488378,33488520,33488734,33488988,33490285,33495542,33496625,33497232,33498432	33485221,33488427,33488629,33488798,33489139,33490339,33495616,33496741,33497297,33501260	Gene ID= ENSG00000198042.10 TPM= 30.89 Transcript Type= protein_coding
chr8	33513475	33513578	33513475	33513578	+	ENST00000459299.1@SNORD13	ENST00000459299.1	snoRNA	33513475	33513578	Gene ID= ENSG00000239039.1 TPM= 4.83 Transcript Type= snoRNA
chr8	33547755	33567125	33547755	33567125	-	ENST00000256257.1@RNF122	ENST00000256257.1	protein_coding	33566699,33558615,33551344,33551044,33549410,33547755	33567125,33558771,33551389,33551085,33549492,33548867	Gene ID= ENSG00000133874.1 TPM= 4.83 Transcript Type= protein_coding
chr8	33591332	33600106	33591332	33600106	-	ENST00000256261.8@DUSP26	ENST00000256261.8	protein_coding	33599665,33597295,33593533,33591332	33600106,33597591,33593747,33592212	Gene ID= ENSG00000133878.8 TPM= 399.64 Transcript Type= protein_coding
chr8	37597480	37599858	37597480	37599858	-	ENST00000519691.1@AC124067.4	ENST00000519691.1	lincRNA	37597480	37599858	Gene ID= ENSG00000254290.1 TPM= 1.93 Transcript Type= lincRNA
chr8	37694743	37696995	37694743	37696995	-	transcript927.chr8.nnic@NA	transcript927.chr8.nnic	NA	37694743	37696995	Gene ID= novel_gene_chr8_928 TPM= 2.9 Transcript Type= NA
chr8	37695751	37700021	37695751	37700021	+	ENST00000331569.5@ZNF703	ENST00000331569.5	protein_coding	37695751,37697145	37696222,37700021	Gene ID= ENSG00000183779.6 TPM= 69.5 Transcript Type= protein_coding
chr8	37762593	37779767	37762593	37779767	+	ENST00000328195.7@PLPBP	ENST00000328195.7	protein_coding	37762593,37765526,37765711,37766280,37772755,37775339,37775918,37777973	37762758,37765633,37765746,37766355,37772889,37775481,37776016,37779767	Gene ID= ENSG00000147471.11 TPM= 26.06 Transcript Type= protein_coding
chr8	37762595	37766741	37762595	37766741	+	ENST00000520073.5@PLPBP	ENST00000520073.5	protein_coding	37762595,37765526,37765711,37766280	37762758,37765633,37765746,37766741	Gene ID= ENSG00000147471.11 TPM= 1.93 Transcript Type= retained_intron
chr8	38030341	38060365	38030341	38060365	+	ENST00000338825.4@EIF4EBP1	ENST00000338825.4	protein_coding	38030341,38057081,38059904	38030718,38057260,38060365	Gene ID= ENSG00000187840.4 TPM= 134.18 Transcript Type= protein_coding
chr8	38105502	38139703	38105502	38139703	+	transcript951.chr8.nnic@ASH2L	transcript951.chr8.nnic	protein_coding	38105502,38106378,38107021,38110379,38110739,38114192,38114905,38116650,38117452,38119270,38120932,38128291,38128758,38133454,38135668,38138816,38138964	38105738,38106444,38107166,38110467,38110833,38114287,38115000,38116725,38117469,38119363,38121149,38128458,38128951,38133546,38135766,38138875,38139703	Gene ID= ENSG00000129691.15 TPM= 27.03 Transcript Type= NA
chr8	38105242	38139965	38105242	38139965	+	ENST00000343823.10@ASH2L	ENST00000343823.10	protein_coding	38105242,38106378,38107021,38110379,38110739,38114192,38114905,38116650,38119270,38120932,38128291,38128758,38133454,38135668,38138816,38138964	38105738,38106444,38107166,38110467,38110833,38114287,38115000,38116725,38119363,38121149,38128458,38128951,38133546,38135766,38138875,38139965	Gene ID= ENSG00000129691.15 TPM= 29.92 Transcript Type= protein_coding
chr8	38163335	38176674	38163335	38176674	-	ENST00000520755.5@LSM1	ENST00000520755.5	protein_coding	38176275,38171965,38163335	38176674,38172033,38163840	Gene ID= ENSG00000175324.9 TPM= 5.79 Transcript Type= protein_coding
chr8	38163321	38176716	38163321	38176716	-	ENST00000311351.8@LSM1	ENST00000311351.8	protein_coding	38176275,38171965,38169802,38163321	38176716,38172033,38169917,38163840	Gene ID= ENSG00000175324.9 TPM= 30.89 Transcript Type= protein_coding
chr8	38176599	38213301	38176599	38213301	+	ENST00000287322.4@BAG4	ENST00000287322.4	protein_coding	38176599,38192688,38207512,38209013,38210008	38177139,38192795,38207766,38209267,38213301	Gene ID= ENSG00000156735.10 TPM= 13.51 Transcript Type= protein_coding
chr8	38231343	38262833	38231343	38262833	+	ENST00000397166.6@DDHD2	ENST00000397166.6	protein_coding	38231343,38232987,38234394,38237538,38238089,38240275,38242250,38245742,38246233,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040,38260600	38231859,38233214,38234584,38237627,38238209,38240364,38242385,38245950,38246300,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260147,38262833	Gene ID= ENSG00000085788.13 TPM= 4.1 Transcript Type= protein_coding
chr8	38231585	38262769	38231585	38262769	+	transcript969.chr8.nic@DDHD2	transcript969.chr8.nic	protein_coding	38231585,38232987,38234394,38237538,38238089,38240275,38242250,38245742,38246233,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040,38261538	38231859,38233214,38234584,38237627,38238209,38240364,38242385,38245950,38246300,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260147,38262769	Gene ID= ENSG00000085788.13 TPM= 2.17 Transcript Type= NA
chr8	38231585	38260254	38231585	38260254	+	transcript970.chr8.nic@DDHD2	transcript970.chr8.nic	protein_coding	38231585,38232987,38234394,38237538,38238089,38240275,38242250,38245742,38246233,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040	38231859,38233214,38234584,38237627,38238209,38240364,38242385,38245950,38246300,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260254	Gene ID= ENSG00000085788.13 TPM= 7 Transcript Type= NA
chr8	38231585	38262766	38231585	38262766	+	transcript975.chr8.nic@DDHD2	transcript975.chr8.nic	protein_coding	38231585,38232987,38234394,38237538,38238089,38242250,38245742,38246233,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040,38260600	38231859,38233214,38234584,38237627,38238209,38242385,38245950,38246300,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260147,38262766	Gene ID= ENSG00000085788.13 TPM= 3.86 Transcript Type= NA
chr8	38231585	38247673	38231585	38247673	+	transcript981.chr8.nic@DDHD2	transcript981.chr8.nic	protein_coding	38231585,38232987,38234394,38237538,38238089,38240275,38242250,38245742	38231859,38233214,38234584,38237627,38238209,38240364,38242385,38247673	Gene ID= ENSG00000085788.13 TPM= 2.17 Transcript Type= NA
chr8	38263130	38269220	38263130	38269220	-	ENST00000424479.6@PLPP5	ENST00000424479.6	protein_coding	38269126,38268882,38268371,38267897,38267267,38266141,38263130	38269220,38268990,38268461,38267960,38267391,38266311,38264604	Gene ID= ENSG00000147535.16 TPM= 1.93 Transcript Type= protein_coding
chr8	38316417	38382272	38316417	38382272	-	ENST00000316985.7@NSD3	ENST00000316985.7	protein_coding	38381799,38347497,38338536,38337305,38331431,38329378,38326730,38321072,38318895,38316417	38382272,38348215,38338607,38337467,38331585,38329893,38326856,38321172,38318940,38318038	Gene ID= ENSG00000147548.16 TPM= 2.9 Transcript Type= protein_coding
chr8	38382364	38383461	38382364	38383461	+	ENST00000607047.1@AC087623.3	ENST00000607047.1	lincRNA	38382364	38383461	Gene ID= ENSG00000272092.1 TPM= 2.9 Transcript Type= lincRNA
chr8	38411138	38468641	38411138	38468641	-	ENST00000397091.9@FGFR1	ENST00000397091.9	protein_coding	38467981,38457356,38429682,38428352,38427921,38426122,38424509,38421797,38419533,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38411138	38468641,38457534,38429948,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804	Gene ID= ENSG00000077782.19 TPM= 1.93 Transcript Type= protein_coding
chr8	38412848	38468635	38412848	38468635	-	transcript993.chr8.nnic@FGFR1	transcript993.chr8.nnic	protein_coding	38467981,38457356,38428346,38427921,38426122,38424509,38421797,38419529,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38412848	38468635,38457534,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804	Gene ID= ENSG00000077782.19 TPM= 1.93 Transcript Type= NA
chr8	38728333	38848132	38728333	38848132	+	transcript1003.chr8.nic@TACC1	transcript1003.chr8.nic	protein_coding	38728333,38788704,38819522,38825308,38827168,38831125,38836162,38838470,38840224,38842287,38843289,38846699,38847955	38728671,38788819,38820635,38825368,38827288,38831177,38836287,38838546,38840267,38842447,38843395,38846819,38848132	Gene ID= ENSG00000147526.19 TPM= 1.93 Transcript Type= NA
chr8	38728190	38850793	38728190	38850793	+	ENST00000520615.5@TACC1	ENST00000520615.5	protein_coding	38728190,38788704,38819522,38825308,38827168,38831125,38836162,38838470,38840224,38842287,38843289,38846699,38847955	38728671,38788819,38820635,38825368,38827375,38831177,38836287,38838546,38840267,38842447,38843395,38846819,38850793	Gene ID= ENSG00000147526.19 TPM= 10.62 Transcript Type= protein_coding
chr8	38988808	38996533	38988808	38996533	-	ENST00000456397.6@TM2D2	ENST00000456397.6	protein_coding	38996213,38995318,38993545,38988808	38996533,38995405,38993660,38991545	Gene ID= ENSG00000169490.16 TPM= 2.9 Transcript Type= protein_coding
chr8	38996994	39118320	38996994	39118320	+	transcript1024.chr8.nnic@ADAM9	transcript1024.chr8.nnic	protein_coding	38996994,39007886,39011658,39013965,39016118,39017219,39018853,39021643,39023156,39025803,39026677,39041946,39054481,39055577,39071298,39077228,39082641,39082968,39090047,39091259,39118086	38997160,39007983,39011716,39014043,39016194,39017414,39018918,39021714,39023325,39025884,39026810,39042117,39054573,39055772,39071403,39077411,39082721,39083073,39090188,39091346,39118320	Gene ID= ENSG00000168615.11 TPM= 1.93 Transcript Type= NA
chr8	38996986	39105001	38996986	39105001	+	ENST00000487273.6@ADAM9	ENST00000487273.6	protein_coding	38996986,39007886,39011658,39013965,39016118,39017219,39018853,39021643,39023156,39025803,39026677,39041946,39054481,39055577,39071298,39077228,39082641,39082968,39090047,39091259,39101863,39103607	38997160,39007983,39011716,39014043,39016194,39017414,39018918,39021714,39023325,39025884,39026810,39042117,39054573,39055772,39071403,39077411,39082721,39083073,39090188,39091346,39101930,39105001	Gene ID= ENSG00000168615.11 TPM= 45.37 Transcript Type= protein_coding
chr8	39913284	39928431	39913284	39928431	+	ENST00000518237.5@IDO1	ENST00000518237.5	protein_coding	39913284,39917875,39918088,39918815,39920100,39922552,39923469,39924721,39925223,39927830	39914009,39917970,39918207,39918933,39920114,39922651,39923586,39924772,39925371,39928431	Gene ID= ENSG00000131203.12 TPM= 1.93 Transcript Type= protein_coding
chr8	41490482	41510980	41490482	41510980	+	ENST00000520817.5@GOLGA7	ENST00000520817.5	protein_coding	41490482,41490833,41497509,41505911,41507059,41509584	41490617,41490965,41497661,41506012,41507121,41510980	Gene ID= ENSG00000147533.16 TPM= 27.99 Transcript Type= protein_coding
chr8	41578202	41621914	41578202	41621914	+	transcript1051.chr8.nnic@GPAT4	transcript1051.chr8.nnic	protein_coding	41578202,41598292,41609416,41609655,41610736,41611903,41612180,41612845,41614386,41614963,41618684,41618898,41619221,41620893	41578278,41599304,41609485,41609955,41610810,41611992,41612273,41612960,41614441,41615048,41618812,41618977,41619351,41621914	Gene ID= ENSG00000158669.11 TPM= 10.99 Transcript Type= NA
chr8	41578187	41621914	41578187	41621914	+	transcript1053.chr8.nnic@GPAT4	transcript1053.chr8.nnic	protein_coding	41578187,41596748,41598292,41609416,41609655,41610736,41611903,41612180,41612845,41614386,41614963,41618684,41618898,41620893	41578278,41596878,41599304,41609485,41609955,41610810,41611992,41612273,41612960,41614441,41615048,41618812,41618977,41621914	Gene ID= ENSG00000158669.11 TPM= 24.26 Transcript Type= NA
chr8	41578187	41621914	41578187	41621914	+	transcript1066.chr8.nic@GPAT4	transcript1066.chr8.nic	protein_coding	41578187,41598292,41609416,41609655,41611903,41612180,41612845,41614386,41614963,41618684,41618898,41620893	41578278,41599304,41609485,41610810,41611992,41612273,41612960,41614441,41615048,41618812,41618977,41621914	Gene ID= ENSG00000158669.11 TPM= 17.79 Transcript Type= NA
chr8	41661041	41665828	41661041	41665828	-	transcript1123.chr8.nic@ANK1	transcript1123.chr8.nic	protein_coding	41664805,41663659,41661041	41665828,41663742,41661941	Gene ID= ENSG00000029534.19 TPM= 14.48 Transcript Type= NA
chr8	41655324	41665274	41655324	41665274	-	ENST00000314214.12@ANK1	ENST00000314214.12	protein_coding	41664805,41663659,41661876,41661430,41655324	41665274,41663742,41661941,41661564,41655753	Gene ID= ENSG00000029534.19 TPM= 149.62 Transcript Type= protein_coding
chr8	41655301	41665286	41655301	41665286	-	ENST00000522543.5@ANK1	ENST00000522543.5	protein_coding	41664805,41663659,41661801,41655301	41665286,41663742,41661941,41655753	Gene ID= ENSG00000029534.19 TPM= 30.89 Transcript Type= protein_coding
chr8	41929479	42051987	41929479	42051987	-	ENST00000396930.3@KAT6A	ENST00000396930.3	protein_coding	42051901,42049576,42048378,41987455,41981839,41980846,41978642,41977008,41974704,41955296,41949222,41947751,41946591,41943748,41942793,41940842,41937256,41929479	42051987,42049707,42049302,41987563,41981954,41980927,41978777,41977327,41974822,41955411,41949363,41947912,41946684,41943979,41943000,41941444,41937568,41934867	Gene ID= ENSG00000083168.9 TPM= 2.41 Transcript Type= protein_coding
chr8	41929479	42051987	41929479	42051987	-	ENST00000406337.5@KAT6A	ENST00000406337.5	protein_coding	42051901,42049620,42048378,41987455,41981839,41980846,41978642,41977008,41974704,41955296,41949222,41947751,41946591,41943748,41942793,41940842,41937256,41929479	42051987,42049707,42049302,41987563,41981954,41980927,41978777,41977327,41974822,41955411,41949363,41947912,41946684,41943979,41943000,41941444,41937568,41934867	Gene ID= ENSG00000083168.9 TPM= 2.41 Transcript Type= protein_coding
chr8	42153011	42171182	42153011	42171182	+	ENST00000396926.7@AP3M2	ENST00000396926.7	protein_coding	42153011,42154616,42157941,42162281,42165071,42165427,42167164,42167666,42168961	42153105,42154960,42158112,42162418,42165156,42165560,42167371,42167810,42171182	Gene ID= ENSG00000070718.11 TPM= 16.41 Transcript Type= protein_coding
chr8	42175233	42207724	42175233	42207724	-	ENST00000220809.8@PLAT	ENST00000220809.8	protein_coding	42207494,42193114,42191372,42188934,42187906,42187398,42185081,42182719,42181937,42180490,42180242,42179926,42178897,42175233	42207724,42193211,42191414,42189071,42188016,42187572,42185172,42182890,42182022,42180685,42180378,42180066,42179063,42176151	Gene ID= ENSG00000104368.17 TPM= 5.79 Transcript Type= protein_coding
chr8	42271302	42331608	42271302	42331608	+	ENST00000520810.5@IKBKB	ENST00000520810.5	protein_coding	42271302,42272083,42288634,42290156,42293443,42305187,42306343,42308901,42314322,42316210,42316710,42317657,42318552,42319270,42319585,42320735,42321896,42322054,42322347,42325970,42329124,42330914	42271469,42272205,42288728,42290273,42293512,42305275,42306432,42309025,42314429,42316339,42316904,42317771,42318675,42319421,42319646,42320844,42321945,42322153,42322494,42326097,42329214,42331608	Gene ID= ENSG00000104365.13 TPM= 11.58 Transcript Type= protein_coding
chr8	42338465	42371808	42338465	42371808	+	transcript1162.chr8.nic@POLB	transcript1162.chr8.nic	protein_coding	42338465,42339012,42344953,42349016,42350007,42352519,42354417,42355516,42357169,42357320,42361295,42362612,42369271,42369849,42371563	42338685,42339069,42345019,42349090,42350065,42352568,42354521,42355567,42357223,42357392,42361365,42362698,42369335,42369988,42371808	Gene ID= ENSG00000070501.11 TPM= 1.93 Transcript Type= NA
chr8	42338455	42371808	42338455	42371808	+	ENST00000265421.8@POLB	ENST00000265421.8	protein_coding	42338455,42339012,42344953,42349016,42350007,42352519,42355516,42357169,42357320,42361295,42362612,42369271,42369849,42371563	42338685,42339069,42345019,42349090,42350065,42352568,42355567,42357223,42357392,42361365,42362698,42369335,42369988,42371808	Gene ID= ENSG00000070501.11 TPM= 7.72 Transcript Type= protein_coding
chr8	42338483	42371808	42338483	42371808	+	transcript1165.chr8.nic@POLB	transcript1165.chr8.nic	protein_coding	42338483,42344953,42349016,42350007,42352519,42355516,42357169,42357320,42361295,42362612,42369271,42369849,42371563	42338685,42345019,42349090,42350065,42352568,42355567,42357223,42357392,42361365,42362698,42369335,42369988,42371808	Gene ID= ENSG00000070501.11 TPM= 4.83 Transcript Type= NA
chr8	42391863	42405897	42391863	42405897	+	transcript1176.chr8.nic@VDAC3	transcript1176.chr8.nic	protein_coding	42391863,42393845,42394210,42395084,42398712,42399651,42401788,42404867,42405371	42391928,42393884,42394278,42395133,42398864,42399703,42403461,42404924,42405897	Gene ID= ENSG00000078668.13 TPM= 10.62 Transcript Type= NA
chr8	42391862	42405897	42391862	42405897	+	transcript1177.chr8.nic@VDAC3	transcript1177.chr8.nic	protein_coding	42391862,42394210,42395084,42398712,42399651,42401788,42403311,42404867,42405371	42391928,42394278,42395133,42398864,42399703,42402015,42403461,42404924,42405897	Gene ID= ENSG00000078668.13 TPM= 6.76 Transcript Type= NA
chr8	42391903	42405897	42391903	42405897	+	ENST00000022615.8@VDAC3	ENST00000022615.8	protein_coding	42391903,42393845,42394210,42395084,42398712,42399651,42401788,42403311,42404867,42405371	42391928,42393884,42394278,42395133,42398864,42399703,42402015,42403461,42404924,42405897	Gene ID= ENSG00000078668.13 TPM= 257.74 Transcript Type= protein_coding
chr8	42416475	42541750	42416475	42541750	-	transcript1192.chr8.nnic@SLC20A2	transcript1192.chr8.nnic	protein_coding	42541538,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42416475	42541750,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 32.56 Transcript Type= NA
chr8	42416475	42542193	42416475	42542193	-	transcript1193.chr8.nnic@SLC20A2	transcript1193.chr8.nnic	protein_coding	42541860,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42416475	42542193,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 23.87 Transcript Type= NA
chr8	42417464	42501460	42417464	42501460	-	ENST00000520262.5@SLC20A2	ENST00000520262.5	protein_coding	42501031,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42417464	42501460,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 12.07 Transcript Type= protein_coding
chr8	42416475	42501181	42416475	42501181	-	transcript1203.chr8.nnic@SLC20A2	transcript1203.chr8.nnic	protein_coding	42501031,42472102,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42416475	42501181,42472654,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 15.83 Transcript Type= NA
chr8	42533655	42541734	42533655	42541734	-	transcript1232.chr8.nic@SLC20A2	transcript1232.chr8.nic	protein_coding	42541538,42533655	42541734,42535335	Gene ID= ENSG00000168575.9 TPM= 7.72 Transcript Type= NA
chr8	42534660	42541503	42534660	42541503	-	ENST00000523340.1@SLC20A2	ENST00000523340.1	protein_coding	42540915,42534660	42541503,42535335	Gene ID= ENSG00000168575.9 TPM= 14.48 Transcript Type= processed_transcript
chr8	42532743	42536355	42532743	42536355	+	transcript1228.chr8.nnic@NA	transcript1228.chr8.nnic	NA	42532743,42536203	42532810,42536355	Gene ID= novel_gene_chr8_1229 TPM= 1.93 Transcript Type= NA
chr8	42541155	42555193	42541155	42555193	+	ENST00000438528.7@SMIM19	ENST00000438528.7	protein_coding	42541155,42546469,42548656,42552544	42541199,42546606,42548780,42555193	Gene ID= ENSG00000176209.11 TPM= 1.93 Transcript Type= protein_coding
chr8	42541608	42552980	42541608	42552980	+	ENST00000417410.6@SMIM19	ENST00000417410.6	protein_coding	42541608,42546469,42548656,42552544	42542373,42546606,42548780,42552980	Gene ID= ENSG00000176209.11 TPM= 10.62 Transcript Type= protein_coding
chr8	42541613	42552980	42541613	42552980	+	ENST00000414154.6@SMIM19	ENST00000414154.6	protein_coding	42541613,42546469,42548656,42552544	42541705,42546606,42548780,42552980	Gene ID= ENSG00000176209.11 TPM= 14.48 Transcript Type= protein_coding
chr8	42541640	42543687	42541640	42543687	+	transcript1237.chr8.nnic@NA	transcript1237.chr8.nnic	NA	42541640	42543687	Gene ID= novel_gene_chr8_1238 TPM= 2.9 Transcript Type= NA
chr8	42836674	42843325	42836674	42843325	-	ENST00000254250.7@THAP1	ENST00000254250.7	protein_coding	42843024,42839186,42836674	42843325,42839381,42838336	Gene ID= ENSG00000131931.8 TPM= 14.48 Transcript Type= protein_coding
chr8	42849637	42896713	42849637	42896713	-	transcript1267.chr8.nnic@RNF170	transcript1267.chr8.nnic	protein_coding	42896484,42887728,42870004,42865416,42850278,42849637	42896713,42887871,42870112,42865489,42850406,42850190	Gene ID= ENSG00000120925.15 TPM= 1.93 Transcript Type= NA
chr8	42896448	42898249	42896448	42898249	+	transcript1270.chr8.nnic@NA	transcript1270.chr8.nnic	NA	42896448	42898249	Gene ID= novel_gene_chr8_1271 TPM= 1.93 Transcript Type= NA
chr8	42896832	43010348	42896832	43010348	+	transcript1259.chr8.nic@HOOK3	transcript1259.chr8.nic	protein_coding	42896832,42906173,42925557,42930122,42943313,42950388,42957094,42959231,42964311,42966473,42968013,42973289,42974107,42982627,42986655,42997550,43002107,43007847,43010305	42897188,42906258,42925629,42930172,42943445,42950455,42957156,42959314,42964474,42966613,42968214,42973399,42974194,42982696,42986795,42997637,43002141,43007929,43010348	Gene ID= ENSG00000168172.8 TPM= 17.38 Transcript Type= NA
chr8	42896979	42907839	42896979	42907839	+	transcript1269.chr8.nic@HOOK3	transcript1269.chr8.nic	protein_coding	42896979,42906173	42897188,42907839	Gene ID= ENSG00000168172.8 TPM= 1.93 Transcript Type= NA
chr8	42896932	43030539	42896932	43030539	+	ENST00000307602.8@HOOK3	ENST00000307602.8	protein_coding	42896932,42906173,42925557,42930122,42943313,42950388,42957094,42959231,42964311,42966473,42968013,42973289,42974107,42982627,42986655,42997550,43002107,43007847,43010305,43013051,43013329,43018358	42897188,42906258,42925629,42930172,42943445,42950455,42957156,42959314,42964474,42966613,42968214,42973399,42974194,42982696,42986795,42997637,43002141,43007929,43010405,43013155,43013400,43030539	Gene ID= ENSG00000168172.8 TPM= 25.1 Transcript Type= protein_coding
chr8	43056153	43085788	43056153	43085788	+	ENST00000302279.7@FNTA	ENST00000302279.7	protein_coding	43056153,43059092,43064101,43069555,43072181,43077216,43083118,43084710,43085160	43056546,43059177,43064215,43069659,43072307,43077364,43083180,43084881,43085788	Gene ID= ENSG00000168522.12 TPM= 79.64 Transcript Type= protein_coding
chr8	43056304	43085788	43056304	43085788	+	transcript1276.chr8.nic@FNTA	transcript1276.chr8.nic	protein_coding	43056304,43059092,43064101,43069555,43072181,43077216,43083118,43084710,43085160	43056507,43059177,43064215,43069659,43072307,43077364,43083180,43084881,43085788	Gene ID= ENSG00000168522.12 TPM= 3.38 Transcript Type= NA
chr8	43056259	43085788	43056259	43085788	+	transcript1277.chr8.nic@FNTA	transcript1277.chr8.nic	protein_coding	43056259,43059092,43064101,43069555,43077216,43083118,43084710,43085160	43056546,43059177,43064215,43069659,43077364,43083180,43084881,43085788	Gene ID= ENSG00000168522.12 TPM= 3.38 Transcript Type= NA
chr8	43056288	43085788	43056288	43085788	+	transcript1280.chr8.nic@FNTA	transcript1280.chr8.nic	protein_coding	43056288,43069555,43072181,43077216,43083118,43084710,43085160	43056546,43069659,43072307,43077364,43083180,43084881,43085788	Gene ID= ENSG00000168522.12 TPM= 5.31 Transcript Type= NA
chr8	43056355	43070353	43056355	43070353	+	ENST00000524546.5@FNTA	ENST00000524546.5	protein_coding	43056355,43059092,43064101,43069555,43070102	43056546,43059177,43064215,43069659,43070353	Gene ID= ENSG00000168522.12 TPM= 1.93 Transcript Type= processed_transcript
chr8	43126697	43129836	43126697	43129836	-	transcript1284.chr8.nnic@NA	transcript1284.chr8.nnic	NA	43126697	43129836	Gene ID= novel_gene_chr8_1285 TPM= 12.55 Transcript Type= NA
chr8	43140413	43174232	43140413	43174232	+	transcript1291.chr8.nic@HGSNAT	transcript1291.chr8.nic	protein_coding	43140413,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43173713	43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43174232	Gene ID= ENSG00000165102.14 TPM= 2.9 Transcript Type= NA
chr8	43140455	43202855	43140455	43202855	+	ENST00000379644.8@HGSNAT	ENST00000379644.8	protein_coding	43140455,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43173713,43178074,43182145,43191474,43192304,43193757,43196948,43197672,43197840,43199388	43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43173743,43178234,43182260,43191595,43192430,43193843,43197025,43197742,43197952,43202855	Gene ID= ENSG00000165102.14 TPM= 5.79 Transcript Type= protein_coding
chr8	47260575	47736306	47260575	47736306	+	ENST00000297423.8@SPIDR	ENST00000297423.8	protein_coding	47260575,47279862,47284028,47291033,47293867,47396376,47407861,47440323,47595811,47598946,47673801,47700403,47701721,47701956,47712662,47713489,47727200,47728933,47729412,47735307	47260991,47280017,47284094,47291137,47294030,47396626,47407961,47440542,47596006,47599196,47673941,47700490,47701864,47702015,47712872,47713641,47727293,47729047,47729465,47736306	Gene ID= ENSG00000164808.16 TPM= 1.93 Transcript Type= protein_coding
chr8	47260919	47397516	47260919	47397516	+	transcript1299.chr8.nic@SPIDR	transcript1299.chr8.nic	protein_coding	47260919,47279862,47284028,47291033,47293867,47396376	47260991,47280017,47284094,47291137,47294030,47397516	Gene ID= ENSG00000164808.16 TPM= 1.93 Transcript Type= NA
chr8	47735639	47738163	47735639	47738163	-	transcript1304.chr8.nnic@NA	transcript1304.chr8.nnic	NA	47735639	47738163	Gene ID= novel_gene_chr8_1305 TPM= 9.65 Transcript Type= NA
chr8	47736909	47739086	47736909	47739086	-	ENST00000408965.3@CEBPD	ENST00000408965.3	protein_coding	47736909	47739086	Gene ID= ENSG00000221869.4 TPM= 243.26 Transcript Type= protein_coding
chr8	47954350	47960172	47954350	47960172	-	transcript1310.chr8.nic@PRKDC	transcript1310.chr8.nic	protein_coding	47959973,47957355,47957171,47955874,47954350	47960172,47957431,47957263,47955948,47954446	Gene ID= ENSG00000253729.7 TPM= 4.83 Transcript Type= NA
chr8	47960898	47978160	47960898	47978160	+	ENST00000523944.5@MCM4	ENST00000523944.5	protein_coding	47960898,47961131,47961516,47962053,47962305,47962764,47962945,47964574,47966187,47967365,47969798,47970511,47971341,47972857,47974734,47975715,47976686	47961014,47961214,47961680,47962216,47962406,47962859,47963040,47964712,47966407,47967485,47970057,47970876,47971468,47973064,47974962,47975848,47978160	Gene ID= ENSG00000104738.16 TPM= 5.79 Transcript Type= protein_coding
chr8	48008400	48064708	48008400	48064708	+	ENST00000523111.6@UBE2V2	ENST00000523111.6	protein_coding	48008400,48043033,48049853,48060682	48008470,48043181,48049978,48064708	Gene ID= ENSG00000169139.11 TPM= 12.55 Transcript Type= protein_coding
chr8	48917768	48921429	48917768	48921429	-	ENST00000020945.3@SNAI2	ENST00000020945.3	protein_coding	48921187,48919896,48917768	48921429,48920441,48918988	Gene ID= ENSG00000019549.9 TPM= 1.93 Transcript Type= protein_coding
chr8	51817580	51899176	51817580	51899176	-	transcript1353.chr8.nic@PCMTD1	transcript1353.chr8.nic	protein_coding	51898930,51845661,51833518,51831444,51817580	51899176,51845763,51833689,51831567,51820718	Gene ID= ENSG00000168300.13 TPM= 27.03 Transcript Type= NA
chr8	51817575	51899186	51817575	51899186	-	ENST00000544451.2@PCMTD1	ENST00000544451.2	protein_coding	51898930,51833518,51831444,51817575	51899186,51833689,51831567,51820718	Gene ID= ENSG00000168300.13 TPM= 5.79 Transcript Type= protein_coding
chr8	51842849	51899169	51842849	51899169	-	transcript1359.chr8.nic@PCMTD1	transcript1359.chr8.nic	protein_coding	51898930,51860845,51842849	51899169,51861246,51845763	Gene ID= ENSG00000168300.13 TPM= 6.27 Transcript Type= NA
chr8	52636015	52714443	52636015	52714443	-	transcript1379.chr8.nic@RB1CC1	transcript1379.chr8.nic	protein_coding	52714075,52686853,52685399,52683887,52683549,52676369,52673845,52668021,52661535,52661095,52660926,52660596,52658873,52657998,52656008,52645702,52642704,52642351,52636015	52714443,52686967,52685520,52684013,52683719,52676571,52674274,52668191,52661719,52661281,52661007,52660657,52658976,52658124,52657908,52645867,52642812,52642591,52636069	Gene ID= ENSG00000023287.12 TPM= 3.86 Transcript Type= NA
chr8	52656247	52714435	52656247	52714435	-	transcript1388.chr8.nnic@RB1CC1	transcript1388.chr8.nnic	protein_coding	52714075,52686853,52685399,52683887,52683549,52676369,52673845,52668021,52661535,52661095,52660926,52660596,52658873,52657998,52656247	52714435,52686967,52685520,52684013,52683634,52676571,52674274,52668191,52661719,52661281,52661007,52660657,52658976,52658124,52657908	Gene ID= ENSG00000023287.12 TPM= 3.86 Transcript Type= NA
chr8	52622456	52714432	52622456	52714432	-	ENST00000025008.9@RB1CC1	ENST00000025008.9	protein_coding	52714075,52686853,52685399,52683887,52683549,52676369,52673845,52668021,52661535,52661095,52660926,52660596,52658873,52657998,52656008,52645702,52642704,52642351,52636015,52634921,52630470,52628032,52624717,52622456	52714432,52686967,52685520,52684013,52683719,52676571,52674274,52668191,52661719,52661281,52661007,52660657,52658976,52658124,52657908,52645867,52642812,52642591,52636069,52634968,52630528,52628168,52624787,52623859	Gene ID= ENSG00000023287.12 TPM= 8.69 Transcript Type= protein_coding
chr8	52713503	52715805	52713503	52715805	+	transcript1409.chr8.nnic@NA	transcript1409.chr8.nnic	NA	52713503,52713869	52713575,52715805	Gene ID= novel_gene_chr8_1410 TPM= 3.86 Transcript Type= NA
chr8	53511787	53514896	53511787	53514896	-	transcript1416.chr8.nnic@NA	transcript1416.chr8.nnic	NA	53511787	53514896	Gene ID= novel_gene_chr8_1417 TPM= 1.93 Transcript Type= NA
chr8	53515173	53523984	53515173	53523984	-	transcript1418.chr8.nnic@AC022034.2	transcript1418.chr8.nnic	lincRNA	53523329,53521209,53515173	53523984,53521379,53516954	Gene ID= ENSG00000237807.3 TPM= 1.93 Transcript Type= NA
chr8	53715557	53843558	53715557	53843558	-	ENST00000355221.7@ATP6V1H	ENST00000355221.7	protein_coding	53843034,53841578,53832984,53829444,53817417,53814662,53801799,53795647,53771989,53769618,53756555,53743577,53715557	53843558,53841725,53833086,53829533,53817530,53814766,53801896,53795839,53772167,53769743,53756656,53743690,53716024	Gene ID= ENSG00000047249.17 TPM= 1.93 Transcript Type= protein_coding
chr8	53715670	53843309	53715670	53843309	-	transcript1427.chr8.nnic@ATP6V1H	transcript1427.chr8.nnic	protein_coding	53843034,53841578,53832984,53829444,53817417,53814662,53811164,53771989,53769618,53756555,53743577,53715670	53843309,53841725,53833086,53829533,53817530,53814766,53811217,53772167,53769743,53756656,53743690,53716024	Gene ID= ENSG00000047249.17 TPM= 1.93 Transcript Type= NA
chr8	53715673	53843262	53715673	53843262	-	ENST00000359530.6@ATP6V1H	ENST00000359530.6	protein_coding	53843034,53841578,53832984,53829444,53817417,53814662,53811164,53801799,53795647,53771989,53769618,53756555,53743577,53715673	53843262,53841725,53833086,53829533,53817530,53814766,53811217,53801896,53795839,53772167,53769743,53756656,53743690,53716024	Gene ID= ENSG00000047249.17 TPM= 61.78 Transcript Type= protein_coding
chr8	53966556	54022339	53966556	54022339	-	transcript1431.chr8.nic@TCEA1	transcript1431.chr8.nic	protein_coding	54022063,54010430,54002892,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966556	54022339,54010492,54002940,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112	Gene ID= ENSG00000187735.13 TPM= 9.32 Transcript Type= NA
chr8	53966556	54022529	53966556	54022529	-	ENST00000521604.6@TCEA1	ENST00000521604.6	protein_coding	54022063,54010430,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966556	54022529,54010492,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112	Gene ID= ENSG00000187735.13 TPM= 152.18 Transcript Type= protein_coding
chr8	53966552	54022448	53966552	54022448	-	ENST00000396401.7@TCEA1	ENST00000396401.7	protein_coding	54022063,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966552	54022448,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112	Gene ID= ENSG00000187735.13 TPM= 6.18 Transcript Type= protein_coding
chr8	54046368	54101916	54046368	54101916	-	transcript1456.chr8.nic@LYPLA1	transcript1456.chr8.nic	protein_coding	54101755,54100908,54065748,54063328,54062254,54055060,54052655,54051012,54046368	54101916,54100939,54065813,54063375,54062324,54055133,54052756,54051146,54048118	Gene ID= ENSG00000120992.17 TPM= 4.18 Transcript Type= NA
chr8	54046368	54102081	54046368	54102081	-	transcript1465.chr8.nnic@LYPLA1	transcript1465.chr8.nnic	protein_coding	54101755,54100908,54065748,54063328,54062254,54052655,54051012,54046368	54102081,54100939,54065813,54063375,54062324,54052756,54051188,54048118	Gene ID= ENSG00000120992.17 TPM= 5.15 Transcript Type= NA
chr8	54046368	54101943	54046368	54101943	-	transcript1470.chr8.nnic@LYPLA1	transcript1470.chr8.nnic	protein_coding	54101755,54100908,54065748,54063328,54062254,54051012,54046368	54101943,54100939,54065813,54063375,54062324,54051188,54048118	Gene ID= ENSG00000120992.17 TPM= 4.18 Transcript Type= NA
chr8	54046367	54102017	54046367	54102017	-	ENST00000316963.7@LYPLA1	ENST00000316963.7	protein_coding	54101755,54100908,54065748,54063328,54062254,54055060,54052655,54051012,54046367	54102017,54100939,54065813,54063375,54062324,54055133,54052756,54051188,54048118	Gene ID= ENSG00000120992.17 TPM= 92.02 Transcript Type= protein_coding
chr8	54135210	54147901	54135210	54147901	+	ENST00000260102.8@MRPL15	ENST00000260102.8	protein_coding	54135210,54136511,54137268,54142663,54147382	54135391,54136665,54137433,54142786,54147901	Gene ID= ENSG00000137547.8 TPM= 131.28 Transcript Type= protein_coding
chr8	54457935	54460888	54457935	54460888	+	ENST00000297316.4@SOX17	ENST00000297316.4	protein_coding	54457935,54459058	54458445,54460888	Gene ID= ENSG00000164736.5 TPM= 9.65 Transcript Type= protein_coding
chr8	55773142	55825446	55773142	55825446	+	ENST00000260129.5@TGS1	ENST00000260129.5	protein_coding	55773142,55782748,55785719,55786238,55790182,55792698,55795978,55798914,55802457,55804893,55810881,55813040,55824581	55773719,55782812,55785891,55787060,55790299,55792784,55796152,55799220,55802606,55805036,55811097,55813118,55825446	Gene ID= ENSG00000137574.10 TPM= 7.72 Transcript Type= protein_coding
chr8	55773427	55825446	55773427	55825446	+	transcript1488.chr8.nic@TGS1	transcript1488.chr8.nic	protein_coding	55773427,55782748,55785719,55786238,55790182,55792698,55795978,55798914,55802457,55804893,55813055,55824581	55773719,55782812,55785891,55787060,55790299,55792784,55796152,55799220,55802606,55805036,55813118,55825446	Gene ID= ENSG00000137574.10 TPM= 1.93 Transcript Type= NA
chr8	56073054	56074510	56073054	56074510	-	ENST00000521262.5@RPS20	ENST00000521262.5	protein_coding	56074254,56074060,56073695,56073054	56074510,56074159,56073768,56073272	Gene ID= ENSG00000008988.9 TPM= 3.86 Transcript Type= protein_coding
chr8	56072947	56074506	56072947	56074506	-	ENST00000009589.7@RPS20	ENST00000009589.7	protein_coding	56074381,56074060,56073695,56072947	56074506,56074159,56073768,56073272	Gene ID= ENSG00000008988.9 TPM= 1.93 Transcript Type= protein_coding
chr8	56211786	56218619	56211786	56218619	+	transcript1504.chr8.nic@CHCHD7	transcript1504.chr8.nic	protein_coding	56211786,56212762,56214598,56216389,56217331	56211837,56212909,56214667,56216531,56218619	Gene ID= ENSG00000170791.17 TPM= 3.86 Transcript Type= NA
chr8	56211756	56218615	56211756	56218615	+	ENST00000303759.3@CHCHD7	ENST00000303759.3	protein_coding	56211756,56212762,56214598,56216433,56217331	56211837,56212909,56214667,56216531,56218615	Gene ID= ENSG00000170791.17 TPM= 6.76 Transcript Type= protein_coding
chr8	56211755	56218613	56211755	56218613	+	ENST00000355315.7@CHCHD7	ENST00000355315.7	protein_coding	56211755,56214598,56216433,56217331	56211837,56214667,56216531,56218613	Gene ID= ENSG00000170791.17 TPM= 9.65 Transcript Type= protein_coding
chr8	56211798	56218619	56211798	56218619	+	ENST00000518801.5@CHCHD7	ENST00000518801.5	protein_coding	56211798,56212762,56214598,56216389,56217331	56211837,56212889,56214667,56216531,56218619	Gene ID= ENSG00000170791.17 TPM= 4.83 Transcript Type= protein_coding
chr8	56965610	56993875	56965610	56993875	-	transcript1523.chr8.nic@IMPAD1	transcript1523.chr8.nic	protein_coding	56993199,56980035,56978050,56965610	56993875,56980197,56978145,56966352	Gene ID= ENSG00000104331.8 TPM= 1.93 Transcript Type= NA
chr8	56957933	56993844	56957933	56993844	-	ENST00000262644.8@IMPAD1	ENST00000262644.8	protein_coding	56993199,56980035,56978050,56966191,56957933	56993844,56980197,56978145,56966352,56964064	Gene ID= ENSG00000104331.8 TPM= 46.33 Transcript Type= protein_coding
chr8	57994554	58148788	57994554	58148788	+	ENST00000361488.7@FAM110B	ENST00000361488.7	protein_coding	57994554,58031606,58043184,58075535,58145907	57994806,58031703,58043299,58075623,58148788	Gene ID= ENSG00000169122.11 TPM= 4.34 Transcript Type= protein_coding
chr8	58070225	58148788	58070225	58148788	+	transcript1538.chr8.nic@FAM110B	transcript1538.chr8.nic	protein_coding	58070225,58075535,58145907	58070362,58075623,58148788	Gene ID= ENSG00000169122.11 TPM= 6.27 Transcript Type= NA
chr8	58411264	58451501	58411264	58451501	+	ENST00000399598.6@UBXN2B	ENST00000399598.6	protein_coding	58411264,58416850,58430519,58433160,58434395,58439633,58445907,58447389	58411469,58416953,58430669,58433243,58434504,58439770,58446068,58451501	Gene ID= ENSG00000215114.8 TPM= 7.72 Transcript Type= protein_coding
chr8	58553169	58582860	58553169	58582860	+	ENST00000260130.8@SDCBP	ENST00000260130.8	protein_coding	58553169,58565019,58570887,58572205,58575900,58578033,58579623,58580517,58581686	58553303,58565084,58570965,58572314,58576061,58578208,58579794,58580608,58582860	Gene ID= ENSG00000137575.11 TPM= 86.88 Transcript Type= protein_coding
chr8	58583504	58659808	58583504	58659808	-	transcript1547.chr8.nnic@NSMAF	transcript1547.chr8.nnic	protein_coding	58659573,58642984,58635468,58635305,58635189,58631496,58629653,58623709,58623377,58623220,58609604,58607769,58605927,58603210,58602058,58601445,58601285,58599970,58599750,58599232,58597860,58597387,58595560,58594232,58590867,58590007,58589452,58587618,58586458,58585898,58585652,58583504	58659808,58643073,58635546,58635372,58635225,58631546,58629957,58623780,58623424,58623272,58609733,58607840,58606035,58603386,58602137,58601535,58601348,58600021,58599870,58599363,58597902,58597550,58595659,58594290,58590934,58590074,58589575,58587701,58586608,58586000,58585761,58584200	Gene ID= ENSG00000035681.7 TPM= 1.93 Transcript Type= NA
chr8	58583504	58659858	58583504	58659858	-	transcript1555.chr8.nic@NSMAF	transcript1555.chr8.nic	protein_coding	58659573,58642984,58635468,58635305,58635189,58631496,58623709,58623377,58623220,58609604,58607769,58605927,58603210,58602058,58601445,58601285,58599970,58599232,58597860,58597387,58595560,58594232,58590867,58590007,58589452,58587618,58586458,58585898,58585652,58583504	58659858,58643073,58635546,58635372,58635225,58631546,58623780,58623424,58623272,58609733,58607840,58606035,58603386,58602137,58601535,58601348,58600021,58599870,58597902,58597550,58595659,58594290,58590934,58590074,58589575,58587701,58586608,58586000,58585761,58584200	Gene ID= ENSG00000035681.7 TPM= 1.93 Transcript Type= NA
chr8	58601168	58659858	58601168	58659858	-	transcript1558.chr8.nic@NSMAF	transcript1558.chr8.nic	protein_coding	58659573,58642984,58635468,58635305,58635189,58631496,58623709,58623377,58623220,58609604,58607769,58605927,58603210,58602058,58601445,58601168	58659858,58643073,58635546,58635372,58635225,58631546,58623780,58623424,58623272,58609733,58607840,58606035,58603386,58602137,58601535,58601348	Gene ID= ENSG00000035681.7 TPM= 2.9 Transcript Type= NA
chr8	58583504	58659844	58583504	58659844	-	ENST00000038176.7@NSMAF	ENST00000038176.7	protein_coding	58659573,58642984,58635468,58635305,58635189,58631496,58623709,58623377,58623220,58609604,58607769,58605927,58603210,58602058,58601445,58601285,58599970,58599750,58599232,58597860,58597387,58595560,58594232,58590867,58590007,58589452,58587618,58586458,58585898,58585652,58583504	58659844,58643073,58635546,58635372,58635225,58631546,58623780,58623424,58623272,58609733,58607840,58606035,58603386,58602137,58601535,58601348,58600021,58599870,58599363,58597902,58597550,58595659,58594290,58590934,58590074,58589575,58587701,58586608,58586000,58585761,58584200	Gene ID= ENSG00000035681.7 TPM= 52.13 Transcript Type= protein_coding
chr8	58659262	58660790	58659262	58660790	+	transcript1565.chr8.nnic@NA	transcript1565.chr8.nnic	NA	58659262	58660790	Gene ID= novel_gene_chr8_1566 TPM= 1.93 Transcript Type= NA
chr8	60187347	60281412	60187347	60281412	-	ENST00000317995.4@CA8	ENST00000317995.4	protein_coding	60281048,60279689,60265925,60232284,60226873,60224537,60222649,60208750,60187347	60281412,60279880,60266049,60232379,60226935,60224585,60222761,60208919,60189985	Gene ID= ENSG00000178538.9 TPM= 1.93 Transcript Type= protein_coding
chr8	60516857	60623627	60516857	60623627	+	ENST00000262646.11@RAB2A	ENST00000262646.11	protein_coding	60516857,60558852,60572046,60584208,60584723,60591858,60618580,60620674	60517253,60558923,60572113,60584290,60584815,60591969,60618648,60623627	Gene ID= ENSG00000104388.14 TPM= 5.79 Transcript Type= protein_coding
chr8	60678745	60781265	60678745	60781265	+	transcript1597.chr8.nic@CHD7	transcript1597.chr8.nic	protein_coding	60678745,60741259,60781000	60679082,60743097,60781265	Gene ID= ENSG00000171316.11 TPM= 11.1 Transcript Type= NA
chr8	60678778	60868028	60678778	60868028	+	ENST00000423902.6@CHD7	ENST00000423902.6	protein_coding	60678778,60741259,60781000,60794986,60800388,60801528,60808217,60816387,60820007,60821790,60822024,60822503,60823840,60828663,60830322,60836073,60836817,60837668,60838076,60841644,60841847,60844864,60845250,60848515,60849051,60850493,60851032,60851262,60852019,60852498,60852829,60854363,60855975,60856445,60860904,60862196,60862548,60865016	60679082,60743097,60781430,60795127,60800525,60801593,60808272,60816501,60820090,60821927,60822145,60822746,60824016,60828806,60830577,60836283,60837012,60837835,60838255,60841754,60842052,60845063,60845409,60848604,60849154,60850622,60851104,60851319,60852247,60852706,60853500,60854523,60856202,60856888,60861125,60862336,60862652,60868028	Gene ID= ENSG00000171316.11 TPM= 1.93 Transcript Type= protein_coding
chr8	61501229	61689861	61501229	61689861	-	transcript1601.chr8.nic@ASPH	transcript1601.chr8.nic	protein_coding	61689673,61684039,61682439,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61618978,61583944,61576772,61567168,61562744,61555924,61553031,61548071,61525977,61518032,61517528,61501229	61689861,61684188,61682483,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61619019,61584029,61576858,61567318,61562880,61556022,61553120,61548208,61526112,61518123,61517661,61503509	Gene ID= ENSG00000198363.17 TPM= 2.41 Transcript Type= NA
chr8	61624539	61689861	61624539	61689861	-	transcript1610.chr8.nnic@ASPH	transcript1610.chr8.nnic	protein_coding	61689673,61684039,61680968,61668234,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61624539	61689861,61684188,61681036,61668275,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61626280	Gene ID= ENSG00000198363.17 TPM= 4.83 Transcript Type= NA
chr8	61618994	61714639	61618994	61714639	-	transcript1613.chr8.nic@ASPH	transcript1613.chr8.nic	protein_coding	61714269,61684039,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61618994	61714639,61684188,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61619019	Gene ID= ENSG00000198363.17 TPM= 2.9 Transcript Type= NA
chr8	61662813	61689861	61662813	61689861	-	transcript1623.chr8.nnic@ASPH	transcript1623.chr8.nnic	protein_coding	61689673,61684039,61682439,61680968,61668234,61664110,61662813	61689861,61684188,61682483,61681036,61668275,61665606,61664013	Gene ID= ENSG00000198363.17 TPM= 6.27 Transcript Type= NA
chr8	61665387	61714557	61665387	61714557	-	transcript1633.chr8.nic@ASPH	transcript1633.chr8.nic	protein_coding	61714269,61684039,61682439,61680968,61668234,61665387	61714557,61684188,61682483,61681036,61668275,61665606	Gene ID= ENSG00000198363.17 TPM= 2.9 Transcript Type= NA
chr8	61659974	61689861	61659974	61689861	-	transcript1639.chr8.nnic@ASPH	transcript1639.chr8.nnic	protein_coding	61689673,61684039,61680968,61668234,61659974	61689861,61684188,61681036,61668275,61661926	Gene ID= ENSG00000198363.17 TPM= 1.93 Transcript Type= NA
chr8	61662818	61714561	61662818	61714561	-	transcript1645.chr8.nic@ASPH	transcript1645.chr8.nic	protein_coding	61714269,61684039,61680968,61668234,61662818	61714561,61684188,61681036,61668275,61665606	Gene ID= ENSG00000198363.17 TPM= 8.21 Transcript Type= NA
chr8	61660741	61664717	61660741	61664717	-	transcript1658.chr8.nnic@NA	transcript1658.chr8.nnic	NA	61660741	61664717	Gene ID= novel_gene_chr8_1659 TPM= 5.31 Transcript Type= NA
chr8	63168545	63212785	63168545	63212785	+	transcript1663.chr8.nnic@YTHDF3	transcript1663.chr8.nnic	protein_coding	63168545,63169387,63175331,63186147,63209683	63168814,63169411,63175416,63187745,63212785	Gene ID= ENSG00000185728.16 TPM= 5.79 Transcript Type= NA
chr8	63168553	63212786	63168553	63212786	+	ENST00000539294.5@YTHDF3	ENST00000539294.5	protein_coding	63168553,63169387,63175331,63186147,63209683	63168901,63169411,63175416,63187745,63212786	Gene ID= ENSG00000185728.16 TPM= 23.17 Transcript Type= protein_coding
chr8	65602456	65634207	65602456	65634207	-	ENST00000276569.7@ARMC1	ENST00000276569.7	protein_coding	65633998,65627216,65622263,65613244,65605422,65605263,65602456	65634207,65627433,65622354,65613433,65605538,65605337,65604585	Gene ID= ENSG00000104442.9 TPM= 11.58 Transcript Type= protein_coding
chr8	65602821	65634168	65602821	65634168	-	transcript1673.chr8.nnic@ARMC1	transcript1673.chr8.nnic	protein_coding	65633998,65622263,65613244,65605422,65605263,65602821	65634168,65622354,65613433,65605538,65605337,65604585	Gene ID= ENSG00000104442.9 TPM= 2.9 Transcript Type= NA
chr8	65644739	65710556	65644739	65710556	+	ENST00000262146.8@MTFR1	ENST00000262146.8	protein_coding	65644739,65669873,65682353,65693644,65704694,65707010,65707843,65708976	65644784,65670018,65682451,65693759,65704929,65707256,65708011,65710556	Gene ID= ENSG00000066855.15 TPM= 6.76 Transcript Type= protein_coding
chr8	65717685	65789052	65717685	65789052	-	transcript1688.chr8.nnic@PDE7A	transcript1688.chr8.nnic	protein_coding	65788882,65782783,65779720,65747652,65745407,65739502,65734794,65727170,65726875,65724777,65724255,65723541,65717685	65789052,65782843,65779803,65747803,65745470,65739597,65734894,65727301,65726966,65724840,65724351,65723621,65719495	Gene ID= ENSG00000205268.10 TPM= 17.38 Transcript Type= NA
chr8	65718379	65789084	65718379	65789084	-	ENST00000379419.8@PDE7A	ENST00000379419.8	protein_coding	65788882,65782783,65779720,65747652,65745407,65739502,65734794,65727170,65726875,65724777,65724255,65723541,65718379	65789084,65782843,65779803,65747803,65745470,65739597,65734894,65727301,65726966,65724921,65724351,65723621,65719495	Gene ID= ENSG00000205268.10 TPM= 30.89 Transcript Type= protein_coding
chr8	66126896	66175487	66126896	66175487	+	ENST00000315962.8@TRIM55	ENST00000315962.8	protein_coding	66126896,66128304,66134990,66137095,66149645,66150217,66150342,66152377,66154047,66174471	66127436,66128476,66135155,66137190,66149878,66150239,66150466,66152627,66154334,66175487	Gene ID= ENSG00000147573.16 TPM= 2.41 Transcript Type= protein_coding
chr8	66126896	66175485	66126896	66175485	+	ENST00000353317.9@TRIM55	ENST00000353317.9	protein_coding	66126896,66128304,66134990,66137095,66149645,66150217,66150342,66152377,66174471	66127436,66128476,66135155,66137190,66149878,66150239,66150466,66152627,66175485	Gene ID= ENSG00000147573.16 TPM= 5.31 Transcript Type= protein_coding
chr8	66429028	66430733	66429028	66430733	+	ENST00000320270.3@RRS1	ENST00000320270.3	protein_coding	66429028	66430733	Gene ID= ENSG00000179041.3 TPM= 142.87 Transcript Type= protein_coding
chr8	66432445	66468907	66432445	66468907	+	transcript1740.chr8.nic@ADHFE1	transcript1740.chr8.nic	protein_coding	66432445,66444367,66444594,66445218,66447264,66448865,66451953,66454059,66456817,66457070,66460308,66468269	66432575,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468907	Gene ID= ENSG00000147576.15 TPM= 2.9 Transcript Type= NA
chr8	66432498	66468809	66432498	66468809	+	ENST00000424777.6@ADHFE1	ENST00000424777.6	protein_coding	66432498,66440162,66442798,66444367,66444594,66445218,66447264,66448865,66451953,66453710,66456817,66457070,66460308,66468269	66432575,66440199,66442844,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468809	Gene ID= ENSG00000147576.15 TPM= 2.73 Transcript Type= nonsense_mediated_decay
chr8	66432499	66468807	66432499	66468807	+	ENST00000276576.11@ADHFE1	ENST00000276576.11	protein_coding	66432499,66440162,66444367,66444594,66445218,66447264,66448865,66451953,66454059,66456817,66457070,66460308,66468269	66432575,66440199,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468807	Gene ID= ENSG00000147576.15 TPM= 9.01 Transcript Type= nonsense_mediated_decay
chr8	66432486	66468907	66432486	66468907	+	ENST00000396623.7@ADHFE1	ENST00000396623.7	protein_coding	66432486,66440162,66442798,66444367,66444594,66445218,66447264,66448865,66451953,66454059,66456817,66457070,66460308,66468269	66432575,66440199,66442844,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468907	Gene ID= ENSG00000147576.15 TPM= 4.34 Transcript Type= protein_coding
chr8	66432503	66433553	66432503	66433553	+	transcript1746.chr8.nnic@NA	transcript1746.chr8.nnic	NA	66432503	66433553	Gene ID= novel_gene_chr8_1747 TPM= 1.93 Transcript Type= NA
chr8	66613549	66614823	66613549	66614823	+	transcript1748.chr8.nnic@NA	transcript1748.chr8.nnic	NA	66613549	66614823	Gene ID= novel_gene_chr8_1749 TPM= 2.9 Transcript Type= NA
chr8	66667596	66678297	66667596	66678297	+	transcript1761.chr8.nic@C8orf44	transcript1761.chr8.nic	protein_coding	66667596,66676745,66677642	66667701,66676902,66678297	Gene ID= ENSG00000213865.7 TPM= 1.93 Transcript Type= NA
chr8	66712685	66860472	66712685	66860472	+	transcript1764.chr8.nnic@C8orf44-SGK3	transcript1764.chr8.nnic	protein_coding	66712685,66714801,66793616,66798542,66804375,66813853,66822372,66828654,66831254,66835763,66835943,66840003,66840211,66841024,66843452,66847193,66850831,66859411	66712833,66714856,66793832,66798625,66804447,66813928,66822459,66828703,66831311,66835846,66836074,66840115,66840247,66841110,66843547,66847348,66850920,66860472	Gene ID= ENSG00000270024.5 TPM= 1.93 Transcript Type= NA
chr8	66712418	66860859	66712418	66860859	+	ENST00000521198.6@SGK3	ENST00000521198.6	protein_coding	66712418,66793616,66798542,66804375,66813853,66822372,66828654,66831254,66835763,66835943,66840003,66840211,66841024,66843452,66847193,66850831,66859411	66712833,66793832,66798625,66804447,66813928,66822459,66828703,66831311,66835846,66836074,66840115,66840247,66841110,66843547,66847348,66850920,66860859	Gene ID= ENSG00000104205.12 TPM= 1.93 Transcript Type= protein_coding
chr8	66775181	66862020	66775181	66862020	+	ENST00000396596.2@SGK3	ENST00000396596.2	protein_coding	66775181,66793616,66798542,66804375,66813853,66822372,66828654,66831254,66835763,66835943,66840003,66840211,66841024,66843452,66847193,66850831,66859411	66775319,66793832,66798625,66804447,66813928,66822459,66828703,66831311,66835846,66836074,66840115,66840247,66841110,66843547,66847348,66850920,66862020	Gene ID= ENSG00000104205.12 TPM= 2.9 Transcript Type= protein_coding
chr8	66921818	66925596	66921818	66925596	-	ENST00000520944.5@SNHG6	ENST00000520944.5	processed_transcript	66925437,66922614,66922324,66921818	66925596,66922725,66922392,66922114	Gene ID= ENSG00000245910.8 TPM= 32.82 Transcript Type= lincRNA
chr8	66921700	66924649	66921700	66924649	+	transcript1779.chr8.nnic@NA	transcript1779.chr8.nnic	NA	66921700	66924649	Gene ID= novel_gene_chr8_1780 TPM= 5.79 Transcript Type= NA
chr8	66925058	66926382	66925058	66926382	+	transcript1776.chr8.nnic@NA	transcript1776.chr8.nnic	NA	66925058,66926273	66925596,66926382	Gene ID= novel_gene_chr8_1777 TPM= 1.93 Transcript Type= NA
chr8	67043079	67062139	67043079	67062139	-	transcript1815.chr8.nic@COPS5	transcript1815.chr8.nic	protein_coding	67061854,67060497,67059211,67058083,67057380,67056519,67051230,67045812,67043079	67062139,67060545,67059445,67058211,67057445,67056604,67051341,67045960,67043317	Gene ID= ENSG00000121022.13 TPM= 21.14 Transcript Type= NA
chr8	67043079	67062330	67043079	67062330	-	transcript1816.chr8.nic@COPS5	transcript1816.chr8.nic	protein_coding	67062106,67061854,67059211,67058083,67057380,67056519,67051230,67045812,67043079	67062330,67062024,67059445,67058211,67057445,67056604,67051341,67045960,67043317	Gene ID= ENSG00000121022.13 TPM= 18.24 Transcript Type= NA
chr8	67043079	67062317	67043079	67062317	-	ENST00000357849.8@COPS5	ENST00000357849.8	protein_coding	67061854,67059211,67058083,67057380,67056519,67051230,67045812,67043079	67062317,67059445,67058211,67057445,67056604,67051341,67045960,67043317	Gene ID= ENSG00000121022.13 TPM= 102.23 Transcript Type= protein_coding
chr8	67064364	67159036	67064364	67159036	+	transcript1792.chr8.nnic@CSPP1	transcript1792.chr8.nnic	protein_coding	67064364,67074243,67076482,67086007,67086823,67091803,67093543,67095293,67103037,67105905,67111972,67113805,67115914,67118248,67118743,67131951,67137456,67154024,67158447,67158991	67064538,67074351,67076581,67086110,67086846,67091883,67093641,67095732,67103135,67105975,67112065,67113862,67116122,67118369,67118821,67132080,67137603,67154136,67158596,67159036	Gene ID= ENSG00000104218.14 TPM= 1.93 Transcript Type= NA
chr8	67064368	67196263	67064368	67196263	+	ENST00000262210.9@CSPP1	ENST00000262210.9	protein_coding	67064368,67074243,67076482,67086007,67093543,67095293,67103037,67105905,67111972,67113805,67115914,67118248,67118743,67131951,67137456,67149783,67154024,67158447,67158991,67161811,67163732,67164391,67172416,67175296,67177680,67179863,67190650,67193464,67195382	67064496,67074351,67076581,67086110,67093641,67095732,67103135,67105975,67112065,67113862,67116122,67118369,67118821,67132080,67137603,67149935,67154136,67158596,67159137,67161915,67163798,67164508,67172555,67175436,67177726,67179926,67190759,67193602,67196263	Gene ID= ENSG00000104218.14 TPM= 1.45 Transcript Type= protein_coding
chr8	67191126	67196263	67191126	67196263	+	transcript1825.chr8.nic@CSPP1	transcript1825.chr8.nic	protein_coding	67191126,67195382	67193602,67196263	Gene ID= ENSG00000104218.14 TPM= 2.41 Transcript Type= NA
chr8	67343441	67345080	67343441	67345080	+	transcript1826.chr8.nnic@NA	transcript1826.chr8.nnic	NA	67343441	67345080	Gene ID= novel_gene_chr8_1827 TPM= 1.93 Transcript Type= NA
chr8	69667047	69835064	69667047	69835064	-	ENST00000260126.8@SLCO5A1	ENST00000260126.8	protein_coding	69834854,69831767,69761743,69755424,69738040,69705031,69682184,69679378,69676609,69667047	69835064,69833169,69761875,69755641,69738204,69705229,69682343,69679619,69676673,69673326	Gene ID= ENSG00000137571.10 TPM= 11.58 Transcript Type= protein_coding
chr8	70573442	70608369	70573442	70608369	-	ENST00000262213.6@TRAM1	ENST00000262213.6	protein_coding	70608077,70600019,70598134,70597895,70596263,70594506,70587106,70586895,70583650,70583164,70573442	70608369,70600082,70598255,70598011,70596321,70594590,70587176,70586999,70583793,70583324,70575005	Gene ID= ENSG00000067167.7 TPM= 67.57 Transcript Type= protein_coding
chr8	70638561	70669290	70638561	70669290	-	transcript1844.chr8.nic@LACTB2	transcript1844.chr8.nic	protein_coding	70668999,70661734,70657756,70644065,70640902,70638561	70669290,70661897,70657882,70644243,70641050,70638629	Gene ID= ENSG00000147592.8 TPM= 2.9 Transcript Type= NA
chr8	70637256	70669157	70637256	70669157	-	ENST00000276590.4@LACTB2	ENST00000276590.4	protein_coding	70668999,70661734,70657756,70644065,70640902,70638548,70637256	70669157,70661897,70657882,70644243,70641050,70638629,70637903	Gene ID= ENSG00000147592.8 TPM= 4.83 Transcript Type= protein_coding
chr8	71841549	71844468	71841549	71844468	-	ENST00000325509.4@MSC	ENST00000325509.4	protein_coding	71843645,71841549	71844468,71842747	Gene ID= ENSG00000178860.8 TPM= 2.9 Transcript Type= protein_coding
chr8	73008864	73048122	73008864	73048122	+	ENST00000276602.10@TERF1	ENST00000276602.10	protein_coding	73008864,73013895,73020684,73022216,73024822,73026940,73032042,73039116,73045961	73009205,73013990,73020805,73022302,73024971,73027052,73032133,73039219,73048122	Gene ID= ENSG00000147601.13 TPM= 1.93 Transcript Type= protein_coding
chr8	73290639	73293898	73290639	73293898	-	ENST00000352983.6@RPL7	ENST00000352983.6	protein_coding	73293599,73292689,73292239,73291773,73291552,73291043,73290639	73293898,73292797,73292405,73291910,73291661,73291252,73290705	Gene ID= ENSG00000147604.13 TPM= 901.6 Transcript Type= protein_coding
chr8	73420369	73746918	73420369	73746918	-	transcript1852.chr8.nic@STAU2	transcript1852.chr8.nic	protein_coding	73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73527691,73422614,73420369	73746918,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 9.64 Transcript Type= NA
chr8	73420369	73746869	73420369	73746869	-	transcript1856.chr8.nic@STAU2	transcript1856.chr8.nic	protein_coding	73746783,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73527691,73422614,73420369	73746869,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 9.32 Transcript Type= NA
chr8	73420369	73746840	73420369	73746840	-	transcript1858.chr8.nic@STAU2	transcript1858.chr8.nic	protein_coding	73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73527691,73422614,73420369	73746840,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 4.5 Transcript Type= NA
chr8	73420371	73746937	73420371	73746937	-	ENST00000524300.5@STAU2	ENST00000524300.5	protein_coding	73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73420371	73746937,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 4.53 Transcript Type= protein_coding
chr8	73420369	73746840	73420369	73746840	-	transcript1861.chr8.nic@STAU2	transcript1861.chr8.nic	protein_coding	73746783,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73527691,73422614,73420369	73746840,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 7.39 Transcript Type= NA
chr8	73420369	73746840	73420369	73746840	-	transcript1863.chr8.nic@STAU2	transcript1863.chr8.nic	protein_coding	73746783,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73420369	73746840,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 5.17 Transcript Type= NA
chr8	73526838	73746841	73526838	73746841	-	transcript1864.chr8.nic@STAU2	transcript1864.chr8.nic	protein_coding	73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73526838	73746841,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804	Gene ID= ENSG00000040341.17 TPM= 4.18 Transcript Type= NA
chr8	73420369	73746839	73420369	73746839	-	transcript1865.chr8.nic@STAU2	transcript1865.chr8.nic	protein_coding	73746783,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73527691,73422614,73420369	73746839,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 4.5 Transcript Type= NA
chr8	73526838	73746927	73526838	73746927	-	transcript1871.chr8.nic@STAU2	transcript1871.chr8.nic	protein_coding	73746783,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73526838	73746927,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804	Gene ID= ENSG00000040341.17 TPM= 1.93 Transcript Type= NA
chr8	73549604	73746840	73549604	73746840	-	ENST00000355780.9@STAU2	ENST00000355780.9	protein_coding	73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73549604	73746840,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319	Gene ID= ENSG00000040341.17 TPM= 1.93 Transcript Type= protein_coding
chr8	73792363	73878909	73792363	73878909	-	ENST00000419880.7@UBE2W	ENST00000419880.7	protein_coding	73878808,73870269,73830381,73825147,73810474,73805651,73792363	73878909,73870301,73830472,73825249,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 4.83 Transcript Type= protein_coding
chr8	73786220	73878910	73786220	73878910	-	ENST00000517608.5@UBE2W	ENST00000517608.5	protein_coding	73878808,73830381,73825147,73810474,73805651,73786220	73878910,73830472,73825249,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 7.72 Transcript Type= protein_coding
chr8	73792360	73878825	73792360	73878825	-	ENST00000602593.5@UBE2W	ENST00000602593.5	protein_coding	73878808,73830381,73825147,73810474,73805651,73792360	73878825,73830472,73825249,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 7.72 Transcript Type= protein_coding
chr8	73945617	73972247	73945617	73972247	-	ENST00000520242.5@ELOC	ENST00000520242.5	protein_coding	73972077,73959765,73955911,73945617	73972247,73959818,73956054,73946820	Gene ID= ENSG00000154582.16 TPM= 13.51 Transcript Type= protein_coding
chr8	73945608	73972170	73945608	73972170	-	ENST00000520210.1@ELOC	ENST00000520210.1	protein_coding	73972077,73955911,73945608	73972170,73956054,73946820	Gene ID= ENSG00000154582.16 TPM= 1.93 Transcript Type= protein_coding
chr8	73946401	73972106	73946401	73972106	-	ENST00000284811.12@ELOC	ENST00000284811.12	protein_coding	73972042,73959765,73955911,73946401	73972106,73959818,73956054,73946820	Gene ID= ENSG00000154582.16 TPM= 6.76 Transcript Type= protein_coding
chr8	73976209	73982783	73976209	73982783	+	ENST00000312184.5@TMEM70	ENST00000312184.5	protein_coding	73976209,73978756,73981155	73976491,73978861,73982783	Gene ID= ENSG00000175606.10 TPM= 68.54 Transcript Type= protein_coding
chr8	74234704	74321575	74234704	74321575	-	transcript1955.chr8.nnic@JPH1	transcript1955.chr8.nnic	protein_coding	74320909,74314861,74259385,74244529,74237208,74234704	74321575,74315620,74259503,74245175,74237303,74235378	Gene ID= ENSG00000104369.4 TPM= 16.13 Transcript Type= NA
chr8	74234704	74321575	74234704	74321575	-	transcript1958.chr8.nnic@JPH1	transcript1958.chr8.nnic	protein_coding	74320909,74314861,74259385,74244529,74237208,74234704	74321575,74315620,74259503,74245175,74237303,74236755	Gene ID= ENSG00000104369.4 TPM= 241.05 Transcript Type= NA
chr8	74234708	74321575	74234708	74321575	-	transcript1961.chr8.nnic@JPH1	transcript1961.chr8.nnic	protein_coding	74320909,74314861,74259385,74244529,74237208,74234708	74321575,74315620,74259503,74245175,74237303,74236609	Gene ID= ENSG00000104369.4 TPM= 56.67 Transcript Type= NA
chr8	74234704	74321575	74234704	74321575	-	transcript1965.chr8.nic@JPH1	transcript1965.chr8.nic	protein_coding	74320909,74314861,74259385,74244529,74234704	74321575,74315620,74259503,74245175,74237303	Gene ID= ENSG00000104369.4 TPM= 32.06 Transcript Type= NA
chr8	74234700	74321328	74234700	74321328	-	ENST00000342232.4@JPH1	ENST00000342232.4	protein_coding	74320909,74314861,74259385,74244529,74237208,74234700	74321328,74315620,74259503,74245175,74237303,74237035	Gene ID= ENSG00000104369.4 TPM= 94 Transcript Type= protein_coding
chr8	74350382	74366876	74350382	74366876	+	ENST00000220822.11@GDAP1	ENST00000220822.11	protein_coding	74350382,74351274,74360137,74361884,74362939,74363985	74350578,74351466,74360310,74361978,74363053,74366876	Gene ID= ENSG00000104381.12 TPM= 6.76 Transcript Type= protein_coding
chr8	76610881	76683276	76610881	76683276	-	transcript1974.chr8.nnic@ZFHX4-AS1	transcript1974.chr8.nnic	antisense_RNA	76683052,76616322,76610881	76683276,76616451,76612027	Gene ID= ENSG00000253661.1 TPM= 1.93 Transcript Type= NA
chr8	76681621	76681825	76681621	76681825	-	transcript1975.chr8.nnic@NA	transcript1975.chr8.nnic	NA	76681621	76681825	Gene ID= novel_gene_chr8_1976 TPM= 1.93 Transcript Type= NA
chr8	76982957	77000267	76982957	77000267	-	ENST00000522527.5@PEX2	ENST00000522527.5	protein_coding	76999990,76986187,76982957	77000267,76986296,76984195	Gene ID= ENSG00000164751.14 TPM= 30.89 Transcript Type= protein_coding
chr8	76982068	77000132	76982068	77000132	-	transcript1992.chr8.nic@PEX2	transcript1992.chr8.nic	protein_coding	76999990,76982068	77000132,76984195	Gene ID= ENSG00000164751.14 TPM= 3.86 Transcript Type= NA
chr8	76982934	77000947	76982934	77000947	-	ENST00000520103.5@PEX2	ENST00000520103.5	protein_coding	77000883,76999990,76982934	77000947,77000132,76984195	Gene ID= ENSG00000164751.14 TPM= 1.93 Transcript Type= protein_coding
chr8	78516139	78605267	78516139	78605267	+	ENST00000396418.6@PKIA	ENST00000396418.6	protein_coding	78516139,78572811,78598358,78601742	78516468,78572939,78598535,78605267	Gene ID= ENSG00000171033.12 TPM= 48.02 Transcript Type= protein_coding
chr8	78516355	78603185	78516355	78603185	+	ENST00000352966.9@PKIA	ENST00000352966.9	protein_coding	78516355,78598358,78601742	78516468,78598535,78603185	Gene ID= ENSG00000171033.12 TPM= 48.51 Transcript Type= protein_coding
chr8	79764010	79767863	79764010	79767863	-	ENST00000354724.7@HEY1	ENST00000354724.7	protein_coding	79767575,79767219,79767009,79766651,79764010	79767863,79767294,79767092,79766732,79765771	Gene ID= ENSG00000164683.16 TPM= 16.89 Transcript Type= protein_coding
chr8	79764013	79767857	79764013	79767857	-	ENST00000337919.9@HEY1	ENST00000337919.9	protein_coding	79767575,79767219,79766997,79766651,79764013	79767857,79767294,79767092,79766732,79765771	Gene ID= ENSG00000164683.16 TPM= 5.31 Transcript Type= protein_coding
chr8	79819040	79827793	79819040	79827793	-	transcript2018.chr8.nnic@AC036214.1	transcript2018.chr8.nnic	lincRNA	79827716,79826451,79820469,79819040	79827793,79826726,79820611,79819153	Gene ID= ENSG00000249328.2 TPM= 1.93 Transcript Type= NA
chr8	79825908	79827793	79825908	79827793	-	transcript2022.chr8.nnic@AC036214.1	transcript2022.chr8.nnic	lincRNA	79827716,79825908	79827793,79826726	Gene ID= ENSG00000249328.2 TPM= 2.9 Transcript Type= NA
chr8	79918717	80029943	79918717	80029943	-	transcript2023.chr8.nic@MRPS28	transcript2023.chr8.nic	protein_coding	80029905,80028695,80002999,79918717	80029943,80028796,80003180,79919148	Gene ID= ENSG00000147586.9 TPM= 2.9 Transcript Type= NA
chr8	79918717	80030271	79918717	80030271	-	ENST00000276585.8@MRPS28	ENST00000276585.8	protein_coding	80030036,80002999,79918717	80030271,80003180,79919148	Gene ID= ENSG00000147586.9 TPM= 7.72 Transcript Type= protein_coding
chr8	80036211	80171582	80036211	80171582	-	transcript2034.chr8.nnic@TPD52	transcript2034.chr8.nnic	protein_coding	80171425,80064478,80053282,80051527,80051252,80042620,80036211	80171582,80064593,80053430,80051628,80051270,80042668,80038235	Gene ID= ENSG00000076554.15 TPM= 1.93 Transcript Type= NA
chr8	80036591	80171582	80036591	80171582	-	transcript2035.chr8.nic@TPD52	transcript2035.chr8.nic	protein_coding	80171425,80064478,80053282,80051527,80050445,80042620,80036591	80171582,80064593,80053430,80051628,80050471,80042668,80038235	Gene ID= ENSG00000076554.15 TPM= 1.93 Transcript Type= NA
chr8	80486213	80521772	80486213	80521772	+	ENST00000455036.7@ZBTB10	ENST00000455036.7	protein_coding	80486213,80499494,80513910,80518403,80518782,80519223	80487782,80500382,80514008,80518579,80518954,80521772	Gene ID= ENSG00000205189.11 TPM= 5.79 Transcript Type= protein_coding
chr8	81280363	81284777	81280363	81284777	+	ENST00000297258.10@FABP5	ENST00000297258.10	protein_coding	81280363,81283366,81283873,81284514	81280674,81283538,81283974,81284777	Gene ID= ENSG00000164687.10 TPM= 24.13 Transcript Type= protein_coding
chr8	81281132	81284772	81281132	81284772	+	transcript2051.chr8.nnic@NA	transcript2051.chr8.nnic	NA	81281132	81284772	Gene ID= novel_gene_chr8_2052 TPM= 1.93 Transcript Type= NA
chr8	81478419	81483263	81478419	81483263	-	ENST00000256104.4@FABP4	ENST00000256104.4	protein_coding	81483095,81480426,81479414,81478419	81483263,81480598,81479515,81478915	Gene ID= ENSG00000170323.8 TPM= 41.51 Transcript Type= protein_coding
chr8	81478699	81483233	81478699	81483233	-	ENST00000522659.1@FABP4	ENST00000522659.1	protein_coding	81483099,81480426,81479414,81478699	81483233,81480598,81479515,81478915	Gene ID= ENSG00000170323.8 TPM= 41.51 Transcript Type= nonsense_mediated_decay
chr8	81657961	81686693	81657961	81686693	-	ENST00000256108.9@IMPA1	ENST00000256108.9	protein_coding	81686252,81681498,81680650,81679126,81676234,81673841,81670939,81660516,81657961	81686693,81681584,81680783,81679230,81676279,81673949,81671047,81660667,81659466	Gene ID= ENSG00000133731.9 TPM= 14.48 Transcript Type= protein_coding
chr8	81701723	81721300	81701723	81721300	-	ENST00000220669.9@ZFAND1	ENST00000220669.9	protein_coding	81721227,81718182,81717249,81714987,81714804,81713918,81702969,81701723	81721300,81718224,81717288,81715114,81714895,81714039,81703124,81702865	Gene ID= ENSG00000104231.10 TPM= 9.65 Transcript Type= protein_coding
chr8	81701765	81721289	81701765	81721289	-	ENST00000522520.5@ZFAND1	ENST00000522520.5	protein_coding	81721227,81718182,81714987,81714804,81713918,81702969,81701765	81721289,81718224,81715114,81714895,81714039,81703124,81702865	Gene ID= ENSG00000104231.10 TPM= 9.65 Transcript Type= protein_coding
chr8	85214502	85220375	85214502	85220375	-	ENST00000612809.4@C8orf59	ENST00000612809.4	protein_coding	85220306,85219323,85217386,85214921,85214502	85220375,85219363,85217502,85215037,85214631	Gene ID= ENSG00000176731.11 TPM= 9.65 Transcript Type= protein_coding
chr8	85438827	85449040	85438827	85449040	+	ENST00000285381.2@CA3	ENST00000285381.2	protein_coding	85438827,85439712,85442073,85444034,85445156,85446142,85448034	85438943,85439909,85442191,85444126,85445218,85446297,85449040	Gene ID= ENSG00000164879.6 TPM= 1047.36 Transcript Type= protein_coding
chr8	85463852	85481493	85463852	85481493	+	ENST00000285379.9@CA2	ENST00000285379.9	protein_coding	85463852,85465272,85473693,85474324,85475798,85477120,85480670	85464115,85465469,85473811,85474416,85475860,85477275,85481493	Gene ID= ENSG00000104267.9 TPM= 31.86 Transcript Type= protein_coding
chr8	86472350	86508766	86472350	86508766	-	transcript2140.chr8.nic@RMDN1	transcript2140.chr8.nic	protein_coding	86508492,86506995,86488552,86486484,86484872,86480277,86478923,86477294,86474820,86472350	86508766,86507112,86488639,86486643,86484961,86480332,86479010,86477324,86474914,86474358	Gene ID= ENSG00000176623.11 TPM= 2.9 Transcript Type= NA
chr8	86472350	86508780	86472350	86508780	-	ENST00000406452.7@RMDN1	ENST00000406452.7	protein_coding	86508492,86506995,86488552,86486484,86484872,86480277,86478923,86477294,86474820,86472350	86508780,86507112,86488639,86486643,86484961,86480332,86479010,86477324,86474953,86474358	Gene ID= ENSG00000176623.11 TPM= 48.27 Transcript Type= protein_coding
chr8	86472350	86514366	86472350	86514366	-	transcript2143.chr8.nic@RMDN1	transcript2143.chr8.nic	protein_coding	86514242,86506995,86488552,86486484,86484872,86480277,86478923,86477294,86474820,86472350	86514366,86507112,86488639,86486643,86484961,86480332,86479010,86477324,86474953,86474358	Gene ID= ENSG00000176623.11 TPM= 2.9 Transcript Type= NA
chr8	86514427	86561498	86514427	86561498	+	ENST00000517490.5@CPNE3	ENST00000517490.5	protein_coding	86514427,86515462,86528536,86528945,86531155,86532509,86537563,86540245,86544740,86546595,86547711,86548301,86551046,86551183,86554851,86556102,86558288	86514541,86515499,86528677,86529124,86531229,86532580,86537646,86540334,86544838,86546681,86547770,86548434,86551100,86551234,86554984,86556338,86561498	Gene ID= ENSG00000085719.12 TPM= 8.69 Transcript Type= protein_coding
chr8	89902534	89927888	89902534	89927888	+	ENST00000451899.6@OSGIN2	ENST00000451899.6	protein_coding	89902534,89909567,89914077,89914555,89921080,89924503	89902837,89909721,89914213,89914746,89921171,89927888	Gene ID= ENSG00000164823.9 TPM= 2.9 Transcript Type= protein_coding
chr8	89933484	89984672	89933484	89984672	-	transcript2186.chr8.nnic@NBN	transcript2186.chr8.nnic	protein_coding	89984525,89982722,89981375,89980734,89980339,89978220,89971173,89970364,89964410,89958725,89955283,89953244,89947824,89946140,89943253,89937026,89933484	89984672,89982855,89981523,89980893,89980428,89978323,89971290,89970557,89964507,89958854,89955555,89953691,89947892,89946295,89943366,89937075,89935612	Gene ID= ENSG00000104320.13 TPM= 1.93 Transcript Type= NA
chr8	89933336	89984716	89933336	89984716	-	ENST00000265433.7@NBN	ENST00000265433.7	protein_coding	89984525,89982722,89981375,89980734,89978220,89971173,89970364,89964410,89958725,89955283,89953244,89947824,89946140,89943253,89937026,89933336	89984716,89982855,89981523,89980893,89978323,89971290,89970557,89964507,89958854,89955555,89953691,89947892,89946295,89943366,89937075,89935612	Gene ID= ENSG00000104320.13 TPM= 15.44 Transcript Type= protein_coding
chr8	90001463	90051999	90001463	90051999	+	transcript2206.chr8.nic@DECR1	transcript2206.chr8.nic	protein_coding	90001463,90005292,90017124,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838	90001561,90005369,90017326,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90051999	Gene ID= ENSG00000104325.6 TPM= 5.79 Transcript Type= NA
chr8	90001405	90052008	90001405	90052008	+	ENST00000220764.6@DECR1	ENST00000220764.6	protein_coding	90001405,90017124,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838	90001561,90017326,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90052008	Gene ID= ENSG00000104325.6 TPM= 77.22 Transcript Type= protein_coding
chr8	90001476	90051972	90001476	90051972	+	ENST00000517597.5@DECR1	ENST00000517597.5	protein_coding	90001476,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838	90001561,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90051972	Gene ID= ENSG00000104325.6 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr8	90054349	90055859	90054349	90055859	-	transcript2216.chr8.nnic@NA	transcript2216.chr8.nnic	NA	90054349	90055859	Gene ID= novel_gene_chr8_2217 TPM= 1.93 Transcript Type= NA
chr8	90621995	90646033	90621995	90646033	-	transcript2219.chr8.nnic@TMEM64	transcript2219.chr8.nnic	protein_coding	90645591,90631552,90621995	90646033,90631707,90625862	Gene ID= ENSG00000180694.13 TPM= 5.31 Transcript Type= NA
chr8	90621995	90646083	90621995	90646083	-	ENST00000458549.6@TMEM64	ENST00000458549.6	protein_coding	90645111,90631552,90621995	90646083,90631707,90625862	Gene ID= ENSG00000180694.13 TPM= 11.1 Transcript Type= protein_coding
chr8	90993796	91041064	90993796	91041064	-	ENST00000285419.7@TMEM55A	ENST00000285419.7	protein_coding	91040644,91021256,91020157,91018390,91008743,90996654,90993796	91041064,91021404,91020263,91018513,91008795,90996744,90995820	Gene ID= ENSG00000155099.7 TPM= 1.93 Transcript Type= protein_coding
chr8	91067911	91070189	91067911	91070189	-	ENST00000524003.1@OTUD6B-AS1	ENST00000524003.1	antisense_RNA	91069931,91067911	91070189,91069822	Gene ID= ENSG00000253738.1 TPM= 27.99 Transcript Type= antisense_RNA
chr8	91070316	91087091	91070316	91087091	+	transcript2253.chr8.nnic@OTUD6B	transcript2253.chr8.nnic	protein_coding	91070316,91071138,91078356,91080669,91084008,91084784	91070466,91071289,91078668,91080730,91084114,91087091	Gene ID= ENSG00000155100.10 TPM= 3.86 Transcript Type= NA
chr8	91954967	92103226	91954967	92103226	-	ENST00000615601.4@RUNX1T1	ENST00000615601.4	protein_coding	92102857,92017226,92014579,92011002,92005116,91991639,91986887,91986124,91975905,91970658,91954967	92103226,92017363,92014820,92011091,92005297,91991889,91986972,91986325,91975973,91970848,91960517	Gene ID= ENSG00000079102.16 TPM= 1.93 Transcript Type= protein_coding
chr8	92668861	92683445	92668861	92683445	+	transcript2256.chr8.nnic@AC104211.1	transcript2256.chr8.nnic	lincRNA	92668861,92678809,92681938	92668967,92679110,92683445	Gene ID= ENSG00000253177.1 TPM= 1.93 Transcript Type= NA
chr8	92668861	92683442	92668861	92683442	+	transcript2257.chr8.nnic@AC104211.1	transcript2257.chr8.nnic	lincRNA	92668861,92681938	92668967,92683442	Gene ID= ENSG00000253177.1 TPM= 1.93 Transcript Type= NA
chr8	93700507	93731527	93700507	93731527	+	ENST00000518322.5@FAM92A	ENST00000518322.5	protein_coding	93700507,93701224,93703620,93704909,93708011,93709771,93718675,93726394,93728205	93700673,93701458,93703688,93705010,93708016,93709875,93718788,93726513,93731527	Gene ID= ENSG00000188343.12 TPM= 3.86 Transcript Type= protein_coding
chr8	93729356	93741017	93729356	93741017	-	ENST00000399300.6@RBM12B	ENST00000399300.6	protein_coding	93740881,93737307,93729356	93741017,93737355,93736438	Gene ID= ENSG00000183808.11 TPM= 1.93 Transcript Type= protein_coding
chr8	93916855	93926062	93916855	93926062	+	ENST00000297598.4@PDP1	ENST00000297598.4	protein_coding	93916855,93922016	93917079,93926062	Gene ID= ENSG00000164951.15 TPM= 25.1 Transcript Type= protein_coding
chr8	93916934	93924388	93916934	93924388	+	ENST00000520728.5@PDP1	ENST00000520728.5	protein_coding	93916934,93917911,93922016	93917079,93917945,93924388	Gene ID= ENSG00000164951.15 TPM= 1.93 Transcript Type= protein_coding
chr8	94249258	94262345	94249258	94262345	-	ENST00000297596.2@GEM	ENST00000297596.2	protein_coding	94262090,94260173,94253036,94252019,94249258	94262345,94260512,94253112,94252223,94250587	Gene ID= ENSG00000164949.7 TPM= 6.76 Transcript Type= protein_coding
chr8	94487693	94553523	94487693	94553523	-	ENST00000297591.9@VIRMA	ENST00000297591.9	protein_coding	94553385,94543827,94538260,94537103,94534839,94530963,94529070,94526223,94518985,94517788,94514869,94511996,94511185,94510417,94509688,94506500,94499374,94496328,94495731,94494860,94492652,94491578,94489939,94487693	94553523,94543942,94538346,94537151,94535007,94531085,94529342,94527363,94519476,94517942,94514951,94512089,94511729,94510652,94509940,94506717,94499506,94496480,94495891,94494956,94492818,94491909,94490082,94488860	Gene ID= ENSG00000164944.11 TPM= 11.1 Transcript Type= protein_coding
chr8	94510733	94553529	94510733	94553529	-	ENST00000421249.2@VIRMA	ENST00000421249.2	protein_coding	94553385,94543827,94538260,94537103,94534839,94530963,94529070,94526223,94518985,94517788,94514869,94511996,94510733	94553529,94543942,94538346,94537151,94535007,94531085,94529342,94527363,94519476,94517942,94514951,94512089,94511729	Gene ID= ENSG00000164944.11 TPM= 1.45 Transcript Type= protein_coding
chr8	94719867	94791839	94719867	94791839	+	transcript2294.chr8.nic@DPY19L4	transcript2294.chr8.nic	protein_coding	94719867,94726331,94738369,94739413,94739645,94756036,94761700,94765183,94765711,94766612,94768395,94770452,94777666,94780359,94781084,94783670,94787894,94789746	94720014,94726441,94738459,94739534,94739790,94756159,94761834,94765314,94765809,94766685,94768553,94770571,94777786,94780415,94781166,94783802,94788052,94791839	Gene ID= ENSG00000156162.16 TPM= 2.9 Transcript Type= NA
chr8	94823265	94880314	94823265	94880314	+	transcript2304.chr8.nnic@INTS8	transcript2304.chr8.nnic	protein_coding	94823265,94824893,94827263,94827722,94828975,94831992,94836524,94837130,94838494,94841491,94842347,94849462,94849916,94851553,94853805,94856777,94859511,94865506,94866158,94867140,94867276,94871884,94873374,94874552,94876074,94876221,94876446,94880118	94823561,94825067,94827403,94827793,94829026,94832174,94836631,94837160,94838618,94841591,94842488,94849532,94850091,94851686,94853915,94856978,94859632,94865690,94866191,94867196,94867337,94872002,94873477,94874602,94876147,94876285,94876489,94880314	Gene ID= ENSG00000164941.13 TPM= 16.89 Transcript Type= NA
chr8	94823288	94880314	94823288	94880314	+	transcript2313.chr8.nic@INTS8	transcript2313.chr8.nic	protein_coding	94823288,94827263,94827722,94828975,94831992,94836524,94838463,94841491,94842347,94849462,94849916,94851553,94853805,94856777,94859511,94865506,94866158,94867140,94867276,94871884,94873374,94874552,94876074,94876221,94876446,94880118	94823561,94827403,94827793,94829026,94832174,94836631,94838618,94841591,94842488,94849532,94850091,94851686,94853915,94856978,94859632,94865690,94866191,94867196,94867337,94872002,94873477,94874602,94876147,94876285,94876489,94880314	Gene ID= ENSG00000164941.13 TPM= 4.34 Transcript Type= NA
chr8	94925972	94949411	94925972	94949411	-	ENST00000342697.4@TP53INP1	ENST00000342697.4	protein_coding	94949154,94940830,94939860,94925972	94949411,94941091,94940220,94930728	Gene ID= ENSG00000164938.13 TPM= 6.76 Transcript Type= protein_coding
chr8	94925972	94949366	94925972	94949366	-	ENST00000448464.6@TP53INP1	ENST00000448464.6	protein_coding	94949154,94940830,94939860,94932070,94925972	94949366,94941091,94940220,94932107,94930728	Gene ID= ENSG00000164938.13 TPM= 8.69 Transcript Type= protein_coding
chr8	95025059	95058710	95025059	95058710	+	transcript2326.chr8.nic@NDUFAF6	transcript2326.chr8.nic	protein_coding	95025059,95031995,95035454,95036371,95041570,95045545,95046994,95048457,95052174,95057809	95025205,95032094,95035576,95036494,95041626,95045647,95047127,95048558,95052230,95058710	Gene ID= ENSG00000156170.12 TPM= 1.93 Transcript Type= NA
chr8	95025054	95058710	95025054	95058710	+	transcript2329.chr8.nic@NDUFAF6	transcript2329.chr8.nic	protein_coding	95025054,95031995,95034008,95035454,95041570,95045545,95046994,95048457,95052174,95057809	95025205,95032098,95034122,95035576,95041626,95045647,95047127,95048558,95052230,95058710	Gene ID= ENSG00000156170.12 TPM= 1.93 Transcript Type= NA
chr8	95024986	95058710	95024986	95058710	+	ENST00000396124.8@NDUFAF6	ENST00000396124.8	protein_coding	95024986,95031995,95035454,95041570,95045545,95046994,95048457,95052174,95057809	95025205,95032094,95035576,95041626,95045647,95047127,95048558,95052230,95058710	Gene ID= ENSG00000156170.12 TPM= 40.54 Transcript Type= protein_coding
chr8	95025063	95057952	95025063	95057952	+	transcript2335.chr8.nnic@NDUFAF6	transcript2335.chr8.nnic	protein_coding	95025063,95031995,95035454,95041570,95045545,95046994,95048457,95052174,95057809	95025205,95032143,95035576,95041626,95045647,95047127,95048558,95052230,95057952	Gene ID= ENSG00000156170.12 TPM= 1.93 Transcript Type= NA
chr8	95025068	95057936	95025068	95057936	+	ENST00000454358.6@NDUFAF6	ENST00000454358.6	protein_coding	95025068,95031995,95035454,95041570,95045545,95046994,95048457,95052174,95057809	95025205,95032098,95035576,95041626,95045647,95047127,95048558,95052230,95057936	Gene ID= ENSG00000156170.12 TPM= 7.72 Transcript Type= nonsense_mediated_decay
chr8	95133804	95156684	95133804	95156684	+	ENST00000315367.3@PLEKHF2	ENST00000315367.3	protein_coding	95133804,95154031	95134030,95156684	Gene ID= ENSG00000175895.3 TPM= 41.51 Transcript Type= protein_coding
chr8	96226675	96228050	96226675	96228050	-	transcript2341.chr8.nnic@NA	transcript2341.chr8.nnic	NA	96226675	96228050	Gene ID= novel_gene_chr8_2342 TPM= 2.9 Transcript Type= NA
chr8	96225920	96235634	96225920	96235634	-	ENST00000287022.9@UQCRB	ENST00000287022.9	protein_coding	96235512,96233156,96231774,96225920	96235634,96233227,96231940,96231132	Gene ID= ENSG00000156467.9 TPM= 2.9 Transcript Type= protein_coding
chr8	96230942	96235539	96230942	96235539	-	ENST00000518406.5@UQCRB	ENST00000518406.5	protein_coding	96235512,96233156,96231774,96231379,96230942	96235539,96233227,96231940,96231515,96231132	Gene ID= ENSG00000156467.9 TPM= 22.2 Transcript Type= protein_coding
chr8	96239424	96261618	96239424	96261618	-	transcript2352.chr8.nnic@MTERF3	transcript2352.chr8.nnic	protein_coding	96261501,96258357,96256962,96250906,96246269,96245860,96243919,96239424	96261618,96258700,96257114,96251095,96246454,96245931,96244080,96239685	Gene ID= ENSG00000156469.8 TPM= 2.25 Transcript Type= NA
chr8	96239424	96261618	96239424	96261618	-	transcript2353.chr8.nnic@MTERF3	transcript2353.chr8.nnic	protein_coding	96261501,96258357,96256962,96250906,96246307,96245860,96243919,96239424	96261618,96258700,96257079,96251095,96246454,96245931,96244080,96239685	Gene ID= ENSG00000156469.8 TPM= 2.25 Transcript Type= NA
chr8	96239424	96261601	96239424	96261601	-	transcript2355.chr8.nnic@MTERF3	transcript2355.chr8.nnic	protein_coding	96261501,96256962,96250906,96246307,96245860,96243919,96239424	96261601,96257114,96251095,96246454,96245931,96244080,96239685	Gene ID= ENSG00000156469.8 TPM= 3.21 Transcript Type= NA
chr8	96243981	96261618	96243981	96261618	-	transcript2358.chr8.nic@MTERF3	transcript2358.chr8.nic	protein_coding	96261501,96258357,96256962,96250906,96246307,96245860,96243981	96261618,96258700,96257114,96251095,96246454,96245931,96244080	Gene ID= ENSG00000156469.8 TPM= 2.9 Transcript Type= NA
chr8	96239435	96261589	96239435	96261589	-	ENST00000287025.3@MTERF3	ENST00000287025.3	protein_coding	96261501,96258357,96256962,96250906,96246307,96245860,96243919,96239435	96261589,96258700,96257114,96251095,96246454,96245931,96244080,96239685	Gene ID= ENSG00000156469.8 TPM= 50.2 Transcript Type= protein_coding
chr8	96493351	96611780	96493351	96611780	+	ENST00000302190.8@SDC2	ENST00000302190.8	protein_coding	96493351,96593480,96602395,96608335,96609385	96494331,96593591,96602528,96608470,96611780	Gene ID= ENSG00000169439.11 TPM= 3.86 Transcript Type= protein_coding
chr8	96645227	97143501	96645227	97143501	+	ENST00000220763.9@CPQ	ENST00000220763.9	protein_coding	96645227,96784864,96834973,96879798,96965935,97029403,97066009,97143020	96645402,96785330,96835180,96880005,96966046,97029494,97066210,97143501	Gene ID= ENSG00000104324.15 TPM= 7.72 Transcript Type= protein_coding
chr8	97273468	97277925	97273468	97277925	-	transcript2378.chr8.nnic@TSPYL5	transcript2378.chr8.nnic	protein_coding	97275684,97273468	97277925,97274363	Gene ID= ENSG00000180543.4 TPM= 1.93 Transcript Type= NA
chr8	97273486	97277896	97273486	97277896	-	transcript2379.chr8.nnic@TSPYL5	transcript2379.chr8.nnic	protein_coding	97275640,97273486	97277896,97274363	Gene ID= ENSG00000180543.4 TPM= 1.93 Transcript Type= NA
chr8	97273486	97277906	97273486	97277906	-	transcript2380.chr8.nnic@TSPYL5	transcript2380.chr8.nnic	protein_coding	97275640,97273486	97277906,97275295	Gene ID= ENSG00000180543.4 TPM= 1.93 Transcript Type= NA
chr8	97273474	97277964	97273474	97277964	-	ENST00000322128.4@TSPYL5	ENST00000322128.4	protein_coding	97273474	97277964	Gene ID= ENSG00000180543.4 TPM= 30.89 Transcript Type= protein_coding
chr8	97644151	97713735	97644151	97713735	+	transcript2392.chr8.nic@MTDH	transcript2392.chr8.nic	protein_coding	97644151,97661072,97686668,97687429,97689038,97690952,97699754,97706626,97713662	97644887,97661173,97686752,97687605,97689103,97691188,97699852,97706750,97713735	Gene ID= ENSG00000147649.9 TPM= 58.24 Transcript Type= NA
chr8	97644155	97713735	97644155	97713735	+	transcript2394.chr8.nic@MTDH	transcript2394.chr8.nic	protein_coding	97644155,97661072,97686668,97687429,97689038,97690952,97706626,97713662	97644887,97661173,97686752,97687605,97689103,97691188,97706750,97713735	Gene ID= ENSG00000147649.9 TPM= 88.49 Transcript Type= NA
chr8	98041721	98045590	98041721	98045590	-	ENST00000287038.7@RPL30	ENST00000287038.7	protein_coding	98045508,98045347,98044943,98042645,98041721	98045590,98045399,98045088,98042775,98041850	Gene ID= ENSG00000156482.10 TPM= 515.22 Transcript Type= protein_coding
chr8	98041721	98045514	98041721	98045514	-	ENST00000521291.5@RPL30	ENST00000521291.5	protein_coding	98045347,98044943,98042645,98041721	98045514,98045088,98042775,98041850	Gene ID= ENSG00000156482.10 TPM= 34.49 Transcript Type= protein_coding
chr8	98041721	98045544	98041721	98045544	-	ENST00000396070.6@RPL30	ENST00000396070.6	protein_coding	98045508,98045347,98044943,98042645,98041721	98045544,98045399,98045088,98042718,98041850	Gene ID= ENSG00000156482.10 TPM= 28.06 Transcript Type= protein_coding
chr8	98041721	98045545	98041721	98045545	-	ENST00000518850.5@RPL30	ENST00000518850.5	protein_coding	98045508,98045347,98044827,98042645,98041721	98045545,98045399,98045088,98042775,98041850	Gene ID= ENSG00000156482.10 TPM= 20.34 Transcript Type= nonsense_mediated_decay
chr8	98038812	98041134	98038812	98041134	+	transcript2422.chr8.nnic@NA	transcript2422.chr8.nnic	NA	98038812	98041134	Gene ID= novel_gene_chr8_2423 TPM= 3.86 Transcript Type= NA
chr8	98045656	98047464	98045656	98047464	+	transcript2424.chr8.nnic@NA	transcript2424.chr8.nnic	NA	98045656	98047464	Gene ID= novel_gene_chr8_2425 TPM= 4.83 Transcript Type= NA
chr8	98102344	98117241	98102344	98117241	-	ENST00000254878.7@RIDA	ENST00000254878.7	protein_coding	98117032,98108646,98106272,98105938,98104489,98102344	98117241,98108751,98106326,98106006,98104544,98102904	Gene ID= ENSG00000132541.10 TPM= 9.65 Transcript Type= protein_coding
chr8	98117312	98159834	98117312	98159834	+	ENST00000401707.6@POP1	ENST00000401707.6	protein_coding	98117312,98123336,98127595,98128365,98129978,98133949,98134472,98136482,98136861,98140078,98140769,98146568,98148815,98150485,98156050,98157617	98117390,98123479,98127762,98128540,98130226,98134036,98134659,98136738,98136954,98140189,98140888,98146683,98149006,98150639,98156412,98159834	Gene ID= ENSG00000104356.10 TPM= 2.9 Transcript Type= protein_coding
chr8	98579378	98825717	98579378	98825717	-	transcript2435.chr8.nic@STK3	transcript2435.chr8.nic	protein_coding	98825515,98774739,98767243,98749276,98707147,98706467,98596032,98579378	98825717,98774819,98767371,98749390,98707311,98706634,98596169,98579789	Gene ID= ENSG00000104375.15 TPM= 2.9 Transcript Type= NA
chr8	98454633	98573978	98454633	98573978	-	transcript2440.chr8.nnic@STK3	transcript2440.chr8.nnic	protein_coding	98573839,98547969,98526742,98454633	98573978,98548161,98526917,98456000	Gene ID= ENSG00000104375.15 TPM= 11.1 Transcript Type= NA
chr8	98454633	98825681	98454633	98825681	-	ENST00000419617.6@STK3	ENST00000419617.6	protein_coding	98825515,98774739,98767243,98749276,98707147,98706467,98596032,98579664,98547969,98526742,98454633	98825681,98774819,98767371,98749390,98707311,98706634,98596169,98579789,98548161,98526917,98456000	Gene ID= ENSG00000104375.15 TPM= 13.03 Transcript Type= protein_coding
chr8	98944458	98952100	98944458	98952100	+	ENST00000435298.6@OSR2	ENST00000435298.6	protein_coding	98944458,98948839,98950656,98951601	98944823,98949608,98950755,98952100	Gene ID= ENSG00000164920.9 TPM= 6.76 Transcript Type= protein_coding
chr8	98996763	99013044	98996763	99013044	-	ENST00000521696.1@AC104986.2	ENST00000521696.1	lincRNA	99012869,98996763	99013044,98996966	Gene ID= ENSG00000253948.1 TPM= 15.44 Transcript Type= lincRNA
chr8	99877866	99894062	99877866	99894062	-	ENST00000520468.6@COX6C	ENST00000520468.6	protein_coding	99893639,99891908,99887490,99877866	99894062,99892052,99887618,99878265	Gene ID= ENSG00000164919.10 TPM= 1.93 Transcript Type= protein_coding
chr8	99878149	99893622	99878149	99893622	-	ENST00000520271.5@COX6C	ENST00000520271.5	protein_coding	99893443,99891908,99887490,99878149	99893622,99892052,99887618,99878265	Gene ID= ENSG00000164919.10 TPM= 9.65 Transcript Type= protein_coding
chr8	99878151	99893623	99878151	99893623	-	ENST00000522940.5@COX6C	ENST00000522940.5	protein_coding	99893319,99891908,99887490,99878151	99893623,99892052,99887618,99878265	Gene ID= ENSG00000164919.10 TPM= 5.79 Transcript Type= protein_coding
chr8	100150584	100154002	100150584	100154002	+	ENST00000353107.7@POLR2K	ENST00000353107.7	protein_coding	100150584,100151347,100151824,100153294	100150709,100151416,100151916,100154002	Gene ID= ENSG00000147669.10 TPM= 23.17 Transcript Type= protein_coding
chr8	100257060	100310151	100257060	100310151	-	transcript2468.chr8.nnic@RNF19A	transcript2468.chr8.nnic	protein_coding	100309867,100287501,100269869,100268785,100264671,100264034,100261542,100259854,100257060	100310151,100288267,100270013,100268947,100264785,100264195,100261755,100259997,100259246	Gene ID= ENSG00000034677.12 TPM= 2.9 Transcript Type= NA
chr8	100257069	100310151	100257069	100310151	-	transcript2471.chr8.nnic@RNF19A	transcript2471.chr8.nnic	protein_coding	100309867,100287501,100274953,100269869,100268785,100264671,100264034,100261542,100257069	100310151,100288267,100275161,100270013,100268947,100264785,100264195,100261755,100259246	Gene ID= ENSG00000034677.12 TPM= 1.93 Transcript Type= NA
chr8	100257342	100310327	100257342	100310327	-	ENST00000341084.6@RNF19A	ENST00000341084.6	protein_coding	100309867,100287501,100274953,100269869,100268785,100264671,100264034,100261542,100259854,100257342	100310327,100288267,100275161,100270013,100268947,100264785,100264195,100261755,100259997,100259246	Gene ID= ENSG00000034677.12 TPM= 4.83 Transcript Type= protein_coding
chr8	100520772	100559784	100520772	100559784	-	ENST00000519597.5@ANKRD46	ENST00000519597.5	protein_coding	100559711,100533209,100532356,100529523,100527845,100520772	100559784,100533311,100532460,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 2.65 Transcript Type= protein_coding
chr8	100520776	100559723	100520776	100559723	-	transcript2480.chr8.nic@ANKRD46	transcript2480.chr8.nic	protein_coding	100559532,100533209,100529523,100527845,100520776	100559723,100533311,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 9.41 Transcript Type= NA
chr8	100520772	100559759	100520772	100559759	-	ENST00000335659.7@ANKRD46	ENST00000335659.7	protein_coding	100559711,100533209,100529523,100527845,100520772	100559759,100533311,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 44.16 Transcript Type= protein_coding
chr8	100520776	100559711	100520776	100559711	-	ENST00000520311.5@ANKRD46	ENST00000520311.5	protein_coding	100559038,100533209,100529523,100527845,100520776	100559711,100533311,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 3.62 Transcript Type= protein_coding
chr8	100702916	100722088	100702916	100722088	-	transcript2482.chr8.nic@PABPC1	transcript2482.chr8.nic	protein_coding	100721729,100721391,100718087,100717773,100715462,100713087,100712652,100712362,100709459,100709133,100706887,100706651,100705589,100704926,100704297,100702916	100722088,100721619,100718280,100717888,100715601,100713181,100712789,100712457,100709731,100709223,100706997,100706805,100705673,100705056,100704390,100703359	Gene ID= ENSG00000070756.15 TPM= 6.76 Transcript Type= NA
chr8	100702916	100722712	100702916	100722712	-	ENST00000318607.9@PABPC1	ENST00000318607.9	protein_coding	100721391,100718087,100717773,100715462,100713087,100712652,100712362,100709459,100709133,100706887,100706651,100705589,100704926,100704297,100702916	100722712,100718280,100717888,100715601,100713181,100712789,100712457,100709731,100709223,100706997,100706805,100705673,100705056,100704390,100703359	Gene ID= ENSG00000070756.15 TPM= 42.47 Transcript Type= protein_coding
chr8	100918579	100952993	100918579	100952993	-	ENST00000457309.2@YWHAZ	ENST00000457309.2	protein_coding	100952850,100948596,100924916,100924135,100923955,100918579	100952993,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 2.73 Transcript Type= protein_coding
chr8	100918577	100952129	100918577	100952129	-	ENST00000395958.5@YWHAZ	ENST00000395958.5	protein_coding	100951929,100948596,100924916,100924135,100923955,100918577	100952129,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 34.59 Transcript Type= protein_coding
chr8	100918686	100953341	100918686	100953341	-	ENST00000353245.7@YWHAZ	ENST00000353245.7	protein_coding	100953269,100948596,100924916,100924135,100923955,100918686	100953341,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 14.8 Transcript Type= protein_coding
chr8	101166805	101169629	101166805	101169629	-	ENST00000565617.1@AP003469.4	ENST00000565617.1	lincRNA	101166805	101169629	Gene ID= ENSG00000261087.1 TPM= 3.86 Transcript Type= lincRNA
chr8	101198933	101205682	101198933	101205682	-	transcript2525.chr8.nnic@ZNF706	transcript2525.chr8.nnic	protein_coding	101205435,101202333,101201607,101199990,101198933	101205682,101202452,101201743,101200097,101199239	Gene ID= ENSG00000120963.11 TPM= 5.31 Transcript Type= NA
chr8	101197052	101205616	101197052	101205616	-	ENST00000311212.8@ZNF706	ENST00000311212.8	protein_coding	101205435,101201607,101199990,101197052	101205616,101201743,101200097,101199239	Gene ID= ENSG00000120963.11 TPM= 12.55 Transcript Type= protein_coding
chr8	101198939	101205732	101198939	101205732	-	ENST00000519882.5@ZNF706	ENST00000519882.5	protein_coding	101205435,101202333,101201607,101199990,101198939	101205732,101202447,101201743,101200097,101199239	Gene ID= ENSG00000120963.11 TPM= 11.1 Transcript Type= protein_coding
chr8	101686727	101790961	101686727	101790961	-	ENST00000220931.10@NCALD	ENST00000220931.10	protein_coding	101790862,101719252,101692791,101686727	101790961,101719648,101692896,101689406	Gene ID= ENSG00000104490.17 TPM= 1.93 Transcript Type= protein_coding
chr8	102204582	102238914	102204582	102238914	-	transcript2558.chr8.nnic@RRM2B	transcript2558.chr8.nnic	protein_coding	102238827,102232149,102225918,102224885,102224046,102214054,102212776,102204582	102238914,102232304,102226034,102225018,102224140,102214158,102212889,102208285	Gene ID= ENSG00000048392.11 TPM= 3.86 Transcript Type= NA
chr8	102204502	102239118	102204502	102239118	-	ENST00000251810.7@RRM2B	ENST00000251810.7	protein_coding	102238827,102232149,102225918,102224885,102224046,102218814,102214054,102212776,102204502	102239118,102232304,102226034,102225018,102224140,102218947,102214158,102212889,102208285	Gene ID= ENSG00000048392.11 TPM= 23.17 Transcript Type= protein_coding
chr8	102253012	102412841	102253012	102412841	-	ENST00000520539.5@UBR5	ENST00000520539.5	protein_coding	102412173,102361582,102361125,102360589,102360071,102346903,102346236,102345396,102342473,102329283,102329090,102327742,102326546,102323311,102314744,102313804,102312342,102312134,102311735,102311299,102305085,102304043,102300000,102299452,102298848,102298392,102297458,102296893,102295636,102295414,102295204,102294982,102293955,102293605,102289453,102288155,102287433,102286360,102285513,102285127,102281289,102280394,102279036,102278826,102276972,102275708,102275521,102272529,102271134,102270039,102268978,102266947,102265100,102264474,102261915,102261146,102258985,102257632,102253012	102412841,102361626,102361206,102360665,102360190,102347092,102346395,102345545,102342684,102329399,102329200,102327896,102326663,102323495,102314853,102313916,102312485,102312245,102311889,102311496,102305295,102304169,102300151,102299547,102298971,102298489,102297606,102296984,102295782,102295532,102295330,102295111,102294115,102293844,102289576,102288266,102287564,102286617,102285781,102285338,102281519,102280467,102279208,102278939,102277192,102275828,102275619,102272772,102271245,102270183,102269108,102267007,102265278,102264558,102262070,102261259,102259129,102257717,102254514	Gene ID= ENSG00000104517.12 TPM= 20.75 Transcript Type= protein_coding
chr8	102358771	102412720	102358771	102412720	-	transcript2561.chr8.nic@UBR5	transcript2561.chr8.nic	protein_coding	102412173,102361582,102361125,102360589,102358771	102412720,102361626,102361206,102360665,102360190	Gene ID= ENSG00000104517.12 TPM= 3.38 Transcript Type= NA
chr8	102648786	102654375	102648786	102654375	-	ENST00000395884.3@KLF10	ENST00000395884.3	protein_coding	102653470,102652164,102651149,102648786	102654375,102652397,102652061,102650391	Gene ID= ENSG00000155090.14 TPM= 130.56 Transcript Type= protein_coding
chr8	102648779	102655902	102648779	102655902	-	ENST00000285407.10@KLF10	ENST00000285407.10	protein_coding	102655566,102652164,102651149,102648779	102655902,102652397,102652061,102650391	Gene ID= ENSG00000155090.14 TPM= 337.13 Transcript Type= protein_coding
chr8	102845610	102848343	102845610	102848343	+	transcript2592.chr8.nnic@NA	transcript2592.chr8.nnic	NA	102845610	102848343	Gene ID= novel_gene_chr8_2593 TPM= 1.93 Transcript Type= NA
chr8	103021102	103069565	103021102	103069565	+	ENST00000518738.1@ATP6V1C1	ENST00000518738.1	protein_coding	103021102,103040798,103042340,103048870,103051050,103052731,103053884,103055868,103062955,103063135,103064714,103066321,103068652	103021225,103040968,103042407,103048955,103051144,103052822,103053982,103055936,103063047,103063228,103064811,103066447,103069565	Gene ID= ENSG00000155097.11 TPM= 7.72 Transcript Type= protein_coding
chr8	103140713	103230305	103140713	103230305	+	ENST00000438105.2@BAALC	ENST00000438105.2	protein_coding	103140713,103227989	103141057,103230305	Gene ID= ENSG00000164929.16 TPM= 1.93 Transcript Type= protein_coding
chr8	103298433	103332817	103298433	103332817	+	ENST00000522566.5@FZD6	ENST00000522566.5	protein_coding	103298433,103299956,103318590,103324481,103328268,103329655,103331341	103298570,103300284,103318786,103325498,103328416,103330065,103332817	Gene ID= ENSG00000164930.11 TPM= 1.93 Transcript Type= protein_coding
chr8	103298831	103332859	103298831	103332859	+	ENST00000358755.4@FZD6	ENST00000358755.4	protein_coding	103298831,103299956,103318590,103324481,103328268,103329655,103331341	103298995,103300284,103318786,103325498,103328416,103330065,103332859	Gene ID= ENSG00000164930.11 TPM= 2.9 Transcript Type= protein_coding
chr8	103371515	103382997	103371515	103382997	+	ENST00000330295.9@CTHRC1	ENST00000330295.9	protein_coding	103371515,103375738,103378027,103382458	103371806,103375959,103378243,103382997	Gene ID= ENSG00000164932.12 TPM= 1.93 Transcript Type= protein_coding
chr8	103398635	103415145	103398635	103415145	-	transcript2622.chr8.nnic@SLC25A32	transcript2622.chr8.nnic	protein_coding	103414784,103413423,103407634,103404776,103403164,103401941,103401516,103398635	103415145,103413531,103407784,103404861,103403324,103402054,103401661,103400546	Gene ID= ENSG00000164933.11 TPM= 2.41 Transcript Type= NA
chr8	103405662	103415144	103405662	103415144	-	transcript2631.chr8.nic@SLC25A32	transcript2631.chr8.nic	protein_coding	103414784,103405662	103415144,103407784	Gene ID= ENSG00000164933.11 TPM= 2.9 Transcript Type= NA
chr8	103398635	103415104	103398635	103415104	-	ENST00000297578.8@SLC25A32	ENST00000297578.8	protein_coding	103414784,103407634,103404776,103403164,103401941,103401516,103398635	103415104,103407784,103404861,103403324,103402054,103401661,103400546	Gene ID= ENSG00000164933.11 TPM= 29.44 Transcript Type= protein_coding
chr8	103414714	103443453	103414714	103443453	+	ENST00000297579.9@DCAF13	ENST00000297579.9	protein_coding	103414714,103420264,103420975,103426056,103427097,103430612,103432659,103435626,103440136,103441455,103442795	103415516,103420463,103421082,103426145,103427252,103430689,103432741,103435790,103440271,103441618,103443453	Gene ID= ENSG00000164934.13 TPM= 12.55 Transcript Type= protein_coding
chr8	104489250	104589006	104489250	104589006	-	ENST00000276654.9@LRP12	ENST00000276654.9	protein_coding	104588819,104531907,104508939,104499317,104496972,104495077,104489250	104589006,104531963,104509074,104499519,104498076,104495209,104491539	Gene ID= ENSG00000147650.11 TPM= 6.76 Transcript Type= protein_coding
chr8	104489231	104589024	104489231	104589024	-	ENST00000424843.6@LRP12	ENST00000424843.6	protein_coding	104588819,104508939,104499317,104496972,104495077,104489231	104589024,104509074,104499519,104498076,104495209,104491539	Gene ID= ENSG00000147650.11 TPM= 3.86 Transcript Type= protein_coding
chr8	105318436	105635471	105318436	105635471	+	transcript2640.chr8.nic@ZFPM2	transcript2640.chr8.nic	protein_coding	105318436,105419144,105444280,105561363,105634246	105318981,105419302,105444381,105561481,105635471	Gene ID= ENSG00000169946.13 TPM= 3.86 Transcript Type= NA
chr8	106657854	106752694	106657854	106752694	+	transcript2649.chr8.nic@OXR1	transcript2649.chr8.nic	protein_coding	106657854,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106737520,106739458,106740343,106742222,106745789,106750806	106658185,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106737600,106739583,106740495,106742317,106745862,106752694	Gene ID= ENSG00000164830.18 TPM= 9.36 Transcript Type= NA
chr8	106657854	106752694	106657854	106752694	+	ENST00000312046.10@OXR1	ENST00000312046.10	protein_coding	106657854,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106739458,106740343,106742222,106745789,106750806	106658185,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106739583,106740495,106742317,106745862,106752694	Gene ID= ENSG00000164830.18 TPM= 3.38 Transcript Type= protein_coding
chr8	106657854	106752016	106657854	106752016	+	transcript2654.chr8.nnic@OXR1	transcript2654.chr8.nnic	protein_coding	106657854,106679210,106683199,106684246,106692728,106706382,106710622,106713823,106737520,106739458,106740343,106742222,106745789,106750806	106658185,106679292,106683306,106684359,106692877,106707145,106710790,106713985,106737600,106739583,106740495,106742317,106745862,106752016	Gene ID= ENSG00000164830.18 TPM= 2.9 Transcript Type= NA
chr8	106726012	106752679	106726012	106752679	+	ENST00000449762.6@OXR1	ENST00000449762.6	protein_coding	106726012,106739458,106740343,106742222,106745789,106750806	106726309,106739583,106740495,106742317,106745862,106752679	Gene ID= ENSG00000164830.18 TPM= 2.9 Transcript Type= protein_coding
chr8	106726107	106752016	106726107	106752016	+	ENST00000297447.10@OXR1	ENST00000297447.10	protein_coding	106726107,106737520,106739458,106740343,106742222,106745789,106750806	106726309,106737600,106739583,106740495,106742317,106745862,106752016	Gene ID= ENSG00000164830.18 TPM= 5.79 Transcript Type= protein_coding
chr8	106760910	106770243	106760910	106770243	-	transcript2672.chr8.nnic@ABRA	transcript2672.chr8.nnic	protein_coding	106769523,106765168,106760910	106770243,106765759,106761514	Gene ID= ENSG00000174429.3 TPM= 1.93 Transcript Type= NA
chr8	106759483	106770244	106759483	106770244	-	transcript2675.chr8.nnic@ABRA	transcript2675.chr8.nnic	protein_coding	106769802,106759483	106770244,106761514	Gene ID= ENSG00000174429.3 TPM= 3.86 Transcript Type= NA
chr8	106759483	106770245	106759483	106770245	-	ENST00000311955.3@ABRA	ENST00000311955.3	protein_coding	106769523,106759483	106770245,106761514	Gene ID= ENSG00000174429.3 TPM= 352.34 Transcript Type= protein_coding
chr8	108201743	108248765	108201743	108248765	-	ENST00000220849.9@EIF3E	ENST00000220849.9	protein_coding	108248613,108241799,108239958,108236161,108234998,108229070,108228267,108217334,108216412,108214607,108203401,108202983,108201743	108248765,108241913,108240075,108236203,108235102,108229195,108228391,108217460,108216513,108214716,108203503,108203117,108201923	Gene ID= ENSG00000104408.9 TPM= 163.94 Transcript Type= protein_coding
chr8	108201743	108248750	108201743	108248750	-	transcript2687.chr8.nic@EIF3E	transcript2687.chr8.nic	protein_coding	108248613,108241799,108239958,108236161,108234998,108229070,108228267,108203401,108202983,108201743	108248750,108241913,108240075,108236203,108235102,108229195,108228391,108203503,108203117,108201923	Gene ID= ENSG00000104408.9 TPM= 6.11 Transcript Type= NA
chr8	108443605	108486918	108443605	108486918	+	transcript2701.chr8.nnic@EMC2	transcript2701.chr8.nnic	protein_coding	108443605,108449823,108450428,108453062,108455873,108469826,108470062,108476782,108479006,108486512	108443698,108449936,108450492,108453147,108455930,108469911,108470121,108476892,108479110,108486918	Gene ID= ENSG00000104412.7 TPM= 1.93 Transcript Type= NA
chr8	108443624	108486912	108443624	108486912	+	ENST00000220853.7@EMC2	ENST00000220853.7	protein_coding	108443624,108449823,108450428,108453062,108455873,108469826,108470062,108475882,108476782,108479006,108486512	108443698,108449936,108450492,108453147,108455930,108469911,108470121,108475963,108476892,108479110,108486912	Gene ID= ENSG00000104412.7 TPM= 36.68 Transcript Type= protein_coding
chr8	109334324	109343664	109334324	109343664	+	ENST00000521662.5@ENY2	ENST00000521662.5	protein_coding	109334324,109336128,109339320,109340489,109343405	109334402,109336204,109339390,109340563,109343664	Gene ID= ENSG00000120533.12 TPM= 3.86 Transcript Type= protein_coding
chr8	109539711	109565160	109539711	109565160	+	ENST00000395785.6@EBAG9	ENST00000395785.6	protein_coding	109539711,109550810,109553865,109554729,109556935,109560838,109564439	109539919,109550907,109553943,109554887,109557042,109560929,109565160	Gene ID= ENSG00000147654.14 TPM= 7.72 Transcript Type= protein_coding
chr8	109574182	109644710	109574182	109644710	-	transcript2732.chr8.nic@SYBU	transcript2732.chr8.nic	protein_coding	109644636,109642728,109618842,109586060,109579799,109577868,109574182	109644710,109642929,109619039,109586162,109580002,109578017,109576013	Gene ID= ENSG00000147642.16 TPM= 3.86 Transcript Type= NA
chr8	116766503	116774690	116766503	116774690	+	ENST00000309822.6@UTP23	ENST00000309822.6	protein_coding	116766503,116770192,116771456	116766791,116770366,116774690	Gene ID= ENSG00000147679.11 TPM= 16.41 Transcript Type= protein_coding
chr8	116766505	116849286	116766505	116849286	+	ENST00000521703.5@UTP23	ENST00000521703.5	protein_coding	116766505,116786503,116848888	116766791,116786649,116849286	Gene ID= ENSG00000147679.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr8	116845935	116874866	116845935	116874866	-	ENST00000297338.6@RAD21	ENST00000297338.6	protein_coding	116874611,116866586,116863130,116861841,116858352,116857267,116856646,116856166,116854245,116852549,116851948,116850618,116848946,116845935	116874866,116866761,116863259,116861940,116858458,116857473,116856771,116856288,116854468,116852708,116852096,116850767,116849029,116847691	Gene ID= ENSG00000164754.14 TPM= 50.2 Transcript Type= protein_coding
chr8	117520713	117540262	117520713	117540262	+	ENST00000297347.7@MED30	ENST00000297347.7	protein_coding	117520713,117528651,117530723,117539883	117521053,117528809,117530827,117540262	Gene ID= ENSG00000164758.7 TPM= 1.93 Transcript Type= protein_coding
chr8	119557086	119673705	119557086	119673705	-	transcript2771.chr8.nic@ENPP2	transcript2771.chr8.nic	protein_coding	119673252,119638425,119626565,119621394,119619244,119617466,119617164,119616265,119607922,119601397,119600678,119593752,119590505,119587044,119586186,119583962,119583717,119582418,119580116,119570705,119569235,119568175,119564823,119562857,119557086	119673705,119638527,119626720,119621519,119619304,119617563,119617243,119616384,119607977,119601462,119600750,119593860,119590630,119587075,119586313,119584049,119583804,119582602,119580167,119570841,119569370,119568252,119564955,119563013,119557691	Gene ID= ENSG00000136960.12 TPM= 1.93 Transcript Type= NA
chr8	119873684	119930155	119873684	119930155	+	transcript2791.chr8.nic@DEPTOR	transcript2791.chr8.nic	protein_coding	119873684,119928400,119929815	119873968,119928578,119930155	Gene ID= ENSG00000155792.9 TPM= 5.79 Transcript Type= NA
chr8	119873717	120050913	119873717	120050913	+	ENST00000286234.5@DEPTOR	ENST00000286234.5	protein_coding	119873717,119928400,119929815,119965232,120001525,120002977,120006805,120009029,120049576	119873968,119928578,119929938,119965410,120001710,120003111,120006875,120009133,120050913	Gene ID= ENSG00000155792.9 TPM= 47.3 Transcript Type= protein_coding
chr8	119873722	119875155	119873722	119875155	+	transcript2794.chr8.nnic@NA	transcript2794.chr8.nnic	NA	119873722	119875155	Gene ID= novel_gene_chr8_2795 TPM= 2.9 Transcript Type= NA
chr8	120051755	120052682	120051755	120052682	+	transcript2792.chr8.nnic@NA	transcript2792.chr8.nnic	NA	120051755	120052682	Gene ID= novel_gene_chr8_2793 TPM= 3.86 Transcript Type= NA
chr8	120052853	120054324	120052853	120054324	+	transcript2796.chr8.nnic@NA	transcript2796.chr8.nnic	NA	120052853	120054324	Gene ID= novel_gene_chr8_2797 TPM= 1.93 Transcript Type= NA
chr8	120054090	120056197	120054090	120056197	+	transcript2800.chr8.nnic@NA	transcript2800.chr8.nnic	NA	120054090	120056197	Gene ID= novel_gene_chr8_2801 TPM= 3.86 Transcript Type= NA
chr8	120057261	120059612	120057261	120059612	+	transcript2802.chr8.nnic@NA	transcript2802.chr8.nnic	NA	120057261	120059612	Gene ID= novel_gene_chr8_2803 TPM= 2.9 Transcript Type= NA
chr8	120395847	120445159	120395847	120445159	-	transcript2804.chr8.nnic@MRPL13	transcript2804.chr8.nnic	protein_coding	120445068,120443185,120440122,120432030,120425306,120419852,120413991,120395847	120445159,120443308,120440245,120432123,120425366,120419938,120414112,120396125	Gene ID= ENSG00000172172.7 TPM= 1.93 Transcript Type= NA
chr8	120395847	120445386	120395847	120445386	-	ENST00000306185.7@MRPL13	ENST00000306185.7	protein_coding	120445068,120443185,120432030,120425306,120419852,120413991,120395847	120445386,120443308,120432123,120425366,120419938,120414112,120396125	Gene ID= ENSG00000172172.7 TPM= 36.68 Transcript Type= protein_coding
chr8	122779970	122781637	122779970	122781637	-	transcript2822.chr8.nnic@NA	transcript2822.chr8.nnic	NA	122779970	122781637	Gene ID= novel_gene_chr8_2823 TPM= 6.76 Transcript Type= NA
chr8	122781704	122952816	122781704	122952816	+	transcript2824.chr8.nnic@ZHX2	transcript2824.chr8.nnic	protein_coding	122781704,122863477,122873440,122951290	122781946,122863539,122873591,122952816	Gene ID= ENSG00000178764.7 TPM= 15.93 Transcript Type= NA
chr8	122781394	122974512	122781394	122974512	+	ENST00000314393.5@ZHX2	ENST00000314393.5	protein_coding	122781394,122863477,122951292,122973242	122781946,122863539,122954028,122974512	Gene ID= ENSG00000178764.7 TPM= 53.57 Transcript Type= protein_coding
chr8	123013164	123042423	123013164	123042423	-	ENST00000259512.8@DERL1	ENST00000259512.8	protein_coding	123041970,123030605,123024986,123023713,123022684,123021447,123019195,123013164	123042423,123030716,123025050,123023739,123022779,123021499,123019305,123015585	Gene ID= ENSG00000136986.9 TPM= 43.92 Transcript Type= protein_coding
chr8	123013350	123042351	123013350	123042351	-	transcript2839.chr8.nnic@DERL1	transcript2839.chr8.nnic	protein_coding	123041970,123024986,123023713,123022684,123021447,123019195,123013350	123042351,123025050,123023739,123022779,123021499,123019305,123015585	Gene ID= ENSG00000136986.9 TPM= 3.38 Transcript Type= NA
chr8	123226191	123241416	123226191	123241416	-	transcript2859.chr8.nnic@C8orf76	transcript2859.chr8.nnic	protein_coding	123241230,123239049,123237798,123231300,123226500,123226191	123241416,123239144,123237941,123231757,123226632,123226357	Gene ID= ENSG00000189376.11 TPM= 2.9 Transcript Type= NA
chr8	123219957	123241398	123219957	123241398	-	ENST00000276704.5@C8orf76	ENST00000276704.5	protein_coding	123241230,123239049,123237798,123231300,123226500,123219957	123241398,123239144,123237941,123231757,123226632,123220297	Gene ID= ENSG00000189376.11 TPM= 21.24 Transcript Type= protein_coding
chr8	123219957	123274644	123219957	123274644	-	transcript2855.chr8.nic@ZHX1-C8orf76	transcript2855.chr8.nic	protein_coding	123274122,123267273,123239049,123237798,123231300,123226500,123219957	123274644,123267386,123239144,123237941,123231757,123226632,123220297	Gene ID= ENSG00000259305.6 TPM= 1.93 Transcript Type= NA
chr8	123219957	123274642	123219957	123274642	-	transcript2856.chr8.nic@ZHX1-C8orf76	transcript2856.chr8.nic	protein_coding	123274217,123267273,123239049,123237798,123231300,123226500,123219957	123274642,123267386,123239144,123237941,123231757,123226632,123220297	Gene ID= ENSG00000259305.6 TPM= 9.65 Transcript Type= NA
chr8	123252429	123274642	123252429	123274642	-	transcript2869.chr8.nic@ZHX1	transcript2869.chr8.nic	protein_coding	123274217,123267273,123252429	123274642,123267386,123256171	Gene ID= ENSG00000165156.14 TPM= 4.83 Transcript Type= NA
chr8	123272975	123274633	123272975	123274633	-	transcript2871.chr8.nnic@NA	transcript2871.chr8.nnic	NA	123272975	123274633	Gene ID= novel_gene_chr8_2872 TPM= 1.93 Transcript Type= NA
chr8	123416725	123442021	123416725	123442021	+	ENST00000287387.6@WDYHV1	ENST00000287387.6	protein_coding	123416725,123427924,123429983,123436453,123437210,123441306	123416932,123428023,123430033,123436601,123437334,123442021	Gene ID= ENSG00000156795.6 TPM= 10.62 Transcript Type= protein_coding
chr8	123497889	123541206	123497889	123541206	-	ENST00000517956.5@FBXO32	ENST00000517956.5	protein_coding	123540899,123534702,123533191,123531898,123514240,123513198,123506392,123504604,123497889	123541206,123534814,123533240,123531990,123514333,123513382,123506574,123504747,123503462	Gene ID= ENSG00000156804.7 TPM= 869.75 Transcript Type= protein_coding
chr8	123503127	123541206	123503127	123541206	-	ENST00000443022.2@FBXO32	ENST00000443022.2	protein_coding	123540899,123534702,123533191,123531898,123506392,123504604,123503127	123541206,123534814,123533240,123531990,123506574,123504747,123503462	Gene ID= ENSG00000156804.7 TPM= 46.02 Transcript Type= protein_coding
chr8	123526996	123541190	123526996	123541190	-	ENST00000520511.1@FBXO32	ENST00000520511.1	protein_coding	123540899,123534702,123533191,123531898,123526996	123541190,123534814,123533240,123531990,123527254	Gene ID= ENSG00000156804.7 TPM= 7.4 Transcript Type= retained_intron
chr8	123524548	123527182	123524548	123527182	-	transcript2931.chr8.nnic@NA	transcript2931.chr8.nnic	NA	123524548	123527182	Gene ID= novel_gene_chr8_2932 TPM= 8.69 Transcript Type= NA
chr8	123532479	123534134	123532479	123534134	+	transcript2923.chr8.nnic@NA	transcript2923.chr8.nnic	NA	123532479	123534134	Gene ID= novel_gene_chr8_2924 TPM= 7.72 Transcript Type= NA
chr8	123537239	123541206	123537239	123541206	-	transcript2927.chr8.nnic@NA	transcript2927.chr8.nnic	NA	123537239	123541206	Gene ID= novel_gene_chr8_2928 TPM= 19.31 Transcript Type= NA
chr8	123643037	123645206	123643037	123645206	-	transcript2950.chr8.nnic@NA	transcript2950.chr8.nnic	NA	123643037	123645206	Gene ID= novel_gene_chr8_2951 TPM= 2.9 Transcript Type= NA
chr8	123644857	123653803	123644857	123653803	-	transcript2945.chr8.nnic@KLHL38	transcript2945.chr8.nnic	protein_coding	123653586,123651577,123646909,123644857	123653803,123652927,123647014,123646028	Gene ID= ENSG00000175946.8 TPM= 25.1 Transcript Type= NA
chr8	124306189	124372562	124306189	124372562	-	transcript2955.chr8.nnic@TMEM65	transcript2955.chr8.nnic	protein_coding	124371854,124330748,124327354,124323321,124322105,124320086,124313965,124306189	124372562,124330792,124327421,124323375,124322147,124320191,124314061,124307447	Gene ID= ENSG00000164983.7 TPM= 7.72 Transcript Type= NA
chr8	124306189	124372692	124306189	124372692	-	ENST00000297632.7@TMEM65	ENST00000297632.7	protein_coding	124371854,124330748,124327354,124323321,124322105,124320086,124306189	124372692,124330792,124327421,124323375,124322147,124320191,124314061	Gene ID= ENSG00000164983.7 TPM= 2.9 Transcript Type= protein_coding
chr8	124450819	124452856	124450819	124452856	+	transcript2966.chr8.nnic@NA	transcript2966.chr8.nnic	NA	124450819	124452856	Gene ID= novel_gene_chr8_2967 TPM= 6.76 Transcript Type= NA
chr8	124474738	124487914	124474738	124487914	+	ENST00000303545.3@RNF139	ENST00000303545.3	protein_coding	124474738,124485831	124475290,124487914	Gene ID= ENSG00000170881.4 TPM= 33.79 Transcript Type= protein_coding
chr8	124488508	124539072	124488508	124539072	-	transcript2973.chr8.nic@TATDN1	transcript2973.chr8.nic	protein_coding	124538928,124522937,124522151,124518742,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488508	124539072,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 3.86 Transcript Type= NA
chr8	124488508	124539098	124488508	124539098	-	transcript2974.chr8.nic@TATDN1	transcript2974.chr8.nic	protein_coding	124539025,124522937,124522151,124518742,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488508	124539098,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 24.13 Transcript Type= NA
chr8	124488508	124539078	124488508	124539078	-	transcript2976.chr8.nic@TATDN1	transcript2976.chr8.nic	protein_coding	124539025,124522151,124518742,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488508	124539078,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 2.9 Transcript Type= NA
chr8	124488508	124539098	124488508	124539098	-	transcript2977.chr8.nic@TATDN1	transcript2977.chr8.nic	protein_coding	124539025,124522937,124518742,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488508	124539098,124523002,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 2.9 Transcript Type= NA
chr8	124488508	124539084	124488508	124539084	-	ENST00000276692.10@TATDN1	ENST00000276692.10	protein_coding	124539025,124522937,124522151,124518818,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488508	124539084,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 32.82 Transcript Type= protein_coding
chr8	124488501	124539088	124488501	124539088	-	ENST00000630259.1@TATDN1	ENST00000630259.1	protein_coding	124539025,124522937,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488501	124539088,124523002,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 1.93 Transcript Type= protein_coding
chr8	124539103	124549979	124539103	124549979	+	ENST00000276689.7@NDUFB9	ENST00000276689.7	protein_coding	124539103,124543087,124547000,124549761	124539287,124543279,124547113,124549979	Gene ID= ENSG00000147684.7 TPM= 434.87 Transcript Type= protein_coding
chr8	124539144	124549978	124539144	124549978	+	ENST00000517367.1@NDUFB9	ENST00000517367.1	protein_coding	124539144,124543120,124547000,124549761	124539287,124543279,124547113,124549978	Gene ID= ENSG00000147684.7 TPM= 56.47 Transcript Type= protein_coding
chr8	124998506	125022283	124998506	125022283	+	ENST00000265896.9@SQLE	ENST00000265896.9	protein_coding	124998506,125003176,125005525,125007391,125008971,125009172,125011537,125018059,125018631,125020784,125021753	124999694,125003428,125005705,125007487,125009084,125009343,125011632,125018201,125018727,125020871,125022283	Gene ID= ENSG00000104549.11 TPM= 2.9 Transcript Type= protein_coding
chr8	125024260	125091840	125024260	125091840	-	ENST00000318410.11@WASHC5	ENST00000318410.11	protein_coding	125091615,125083713,125083113,125082383,125081661,125078738,125076348,125074998,125073153,125067592,125063522,125061082,125059376,125059222,125057556,125056677,125055591,125050564,125049006,125047207,125044536,125043992,125043825,125039795,125038830,125037237,125032241,125028620,125024260	125091840,125084022,125083258,125082467,125081761,125078930,125076500,125075111,125073324,125067719,125063651,125061194,125059542,125059297,125057666,125056817,125055671,125050665,125049185,125047331,125044698,125044094,125043904,125039898,125038959,125037333,125032394,125028707,125024673	Gene ID= ENSG00000164961.15 TPM= 24.13 Transcript Type= protein_coding
chr8	125024267	125091792	125024267	125091792	-	transcript3002.chr8.nnic@WASHC5	transcript3002.chr8.nnic	protein_coding	125091615,125083713,125083113,125082383,125081661,125078738,125076348,125074998,125073153,125067592,125063522,125061082,125059376,125059222,125057556,125056677,125055591,125050564,125049006,125047207,125044536,125043992,125043825,125039795,125038830,125037237,125028620,125024267	125091792,125084022,125083258,125082467,125081761,125078930,125076500,125075111,125073324,125067719,125063651,125061194,125059542,125059297,125057666,125056817,125055671,125050665,125049185,125047331,125044698,125044094,125043904,125039898,125038959,125037333,125028707,125024673	Gene ID= ENSG00000164961.15 TPM= 2.9 Transcript Type= NA
chr8	125091863	125367120	125091863	125367120	+	transcript3010.chr8.nic@NSMCE2	transcript3010.chr8.nic	protein_coding	125091863,125102014,125102317,125151171,125182103,125357219,125357712,125366768	125091958,125102146,125102487,125151277,125182256,125357319,125357818,125367120	Gene ID= ENSG00000156831.7 TPM= 1.93 Transcript Type= NA
chr8	125091853	125367120	125091853	125367120	+	ENST00000287437.7@NSMCE2	ENST00000287437.7	protein_coding	125091853,125102051,125102317,125151171,125182103,125357219,125357712,125366768	125091958,125102146,125102487,125151277,125182256,125357319,125357818,125367120	Gene ID= ENSG00000156831.7 TPM= 8.69 Transcript Type= protein_coding
chr8	125430341	125438401	125430341	125438401	+	transcript3018.chr8.nic@TRIB1	transcript3018.chr8.nic	protein_coding	125430341,125433317,125436006	125431262,125433768,125438401	Gene ID= ENSG00000173334.3 TPM= 1.93 Transcript Type= NA
chr8	125430321	125438405	125430321	125438405	+	ENST00000311922.3@TRIB1	ENST00000311922.3	protein_coding	125430321,125433317,125436006	125431262,125433609,125438405	Gene ID= ENSG00000173334.3 TPM= 22.2 Transcript Type= protein_coding
chr8	126552534	126555397	126552534	126555397	-	transcript3020.chr8.nnic@NA	transcript3020.chr8.nnic	NA	126552534	126555397	Gene ID= novel_gene_chr8_3021 TPM= 1.93 Transcript Type= NA
chr8	127736069	127741434	127736069	127741434	+	ENST00000621592.5@MYC	ENST00000621592.5	protein_coding	127736069,127738248,127740396	127736623,127739019,127741434	Gene ID= ENSG00000136997.17 TPM= 100.39 Transcript Type= protein_coding
chr8	129668635	129670663	129668635	129670663	+	transcript3031.chr8.nnic@NA	transcript3031.chr8.nnic	NA	129668635	129670663	Gene ID= novel_gene_chr8_3032 TPM= 1.93 Transcript Type= NA
chr8	129748196	129752886	129748196	129752886	-	ENST00000522273.5@GSDMC	ENST00000522273.5	protein_coding	129752698,129752106,129751862,129751542,129750431,129749990,129749452,129748196	129752886,129752147,129751891,129751568,129750570,129750119,129749525,129748740	Gene ID= ENSG00000147697.8 TPM= 4.83 Transcript Type= retained_intron
chr8	129841470	129939767	129841470	129939767	-	transcript3040.chr8.nic@FAM49B	transcript3040.chr8.nic	protein_coding	129939608,129904499,129903312,129896672,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	129939767,129904585,129903350,129896854,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 1.93 Transcript Type= NA
chr8	129841470	129939795	129841470	129939795	-	transcript3048.chr8.nic@FAM49B	transcript3048.chr8.nic	protein_coding	129939608,129903312,129896672,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	129939795,129903350,129896854,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 2.9 Transcript Type= NA
chr8	129841470	129939804	129841470	129939804	-	transcript3050.chr8.nic@FAM49B	transcript3050.chr8.nic	protein_coding	129939608,129903312,129896749,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	129939804,129903350,129896854,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 1.93 Transcript Type= NA
chr8	129841470	130016453	129841470	130016453	-	transcript3055.chr8.nic@FAM49B	transcript3055.chr8.nic	protein_coding	130016370,129970943,129903312,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	130016453,129970995,129903350,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 1.93 Transcript Type= NA
chr8	129839593	129939787	129839593	129939787	-	transcript3056.chr8.nic@FAM49B	transcript3056.chr8.nic	protein_coding	129939608,129903312,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129839593	129939787,129903350,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 1.93 Transcript Type= NA
chr8	129839593	129939832	129839593	129939832	-	ENST00000519824.6@FAM49B	ENST00000519824.6	protein_coding	129939608,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129839593	129939832,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 8.69 Transcript Type= protein_coding
chr8	129841497	129939872	129841497	129939872	-	ENST00000519540.5@FAM49B	ENST00000519540.5	protein_coding	129939608,129904499,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841497	129939872,129904585,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 4.83 Transcript Type= protein_coding
chr8	130936752	131040937	130936752	131040937	-	transcript3068.chr8.nic@ADCY8	transcript3068.chr8.nic	protein_coding	131039374,130990393,130951868,130943351,130936752	131040937,130990542,130951998,130943462,130937200	Gene ID= ENSG00000155897.9 TPM= 1.93 Transcript Type= NA
chr8	131904083	132013642	131904083	132013642	+	transcript3084.chr8.nic@EFR3A	transcript3084.chr8.nic	protein_coding	131904083,131940499,131944745,131946483,131949969,131953818,131955768,131959585,131968295,131970476,131976027,131977041,131978847,131979346,131984139,131984929,131986194,131987575,131996406,132001759,132002603,132003236,132010790	131904322,131940644,131944872,131946633,131950090,131953967,131955905,131959663,131968430,131970643,131976141,131977092,131979019,131979421,131984300,131985060,131986261,131987702,131996497,132001807,132002706,132003285,132013642	Gene ID= ENSG00000132294.14 TPM= 3.54 Transcript Type= NA
chr8	131904083	131979368	131904083	131979368	+	transcript3090.chr8.nic@EFR3A	transcript3090.chr8.nic	protein_coding	131904083,131940499,131944745,131946483,131949969,131953818,131955768,131959585,131968295,131970476,131976027,131977041,131978847,131979346	131904322,131940575,131944872,131946633,131950090,131953967,131955905,131959663,131968430,131970643,131976141,131977092,131979019,131979368	Gene ID= ENSG00000132294.14 TPM= 6.76 Transcript Type= NA
chr8	132775351	132825371	132775351	132825371	+	transcript3100.chr8.nic@PHF20L1	transcript3100.chr8.nic	protein_coding	132775351,132777792,132794410,132794733,132798772,132803819,132804612,132811046,132814637,132816888,132817339,132824004,132825264	132775645,132777911,132794581,132794817,132798860,132804032,132804740,132811128,132814889,132817076,132817545,132824060,132825371	Gene ID= ENSG00000129292.20 TPM= 6.03 Transcript Type= NA
chr8	132775351	132813188	132775351	132813188	+	transcript3126.chr8.nic@PHF20L1	transcript3126.chr8.nic	protein_coding	132775351,132777792,132794410,132794733,132798772,132803819,132804615,132811046	132775645,132777911,132794581,132794817,132798860,132804032,132804740,132813188	Gene ID= ENSG00000129292.20 TPM= 2.17 Transcript Type= NA
chr8	132775351	132804687	132775351	132804687	+	transcript3127.chr8.nnic@PHF20L1	transcript3127.chr8.nnic	protein_coding	132775351,132777796,132794410,132794733,132795966,132798772,132803819,132804615	132775645,132777911,132794581,132794817,132796089,132798860,132804032,132804687	Gene ID= ENSG00000129292.20 TPM= 1.93 Transcript Type= NA
chr8	132775398	132799960	132775398	132799960	+	ENST00000485595.5@PHF20L1	ENST00000485595.5	protein_coding	132775398,132777796,132794410,132794733,132798772	132775645,132777911,132794581,132794817,132799960	Gene ID= ENSG00000129292.20 TPM= 1.93 Transcript Type= protein_coding
chr8	132775408	132812316	132775408	132812316	+	ENST00000337920.8@PHF20L1	ENST00000337920.8	protein_coding	132775408,132777796,132794410,132794733,132798772,132803819,132804615,132811046	132775645,132777911,132794581,132794817,132798860,132804032,132804740,132812316	Gene ID= ENSG00000129292.20 TPM= 1.93 Transcript Type= protein_coding
chr8	133237176	133256228	133237176	133256228	-	ENST00000519278.5@NDRG1	ENST00000519278.5	protein_coding	133254539,133250440,133248715,133247875,133246616,133244355,133242023,133237176	133256228,133250543,133248771,133247926,133246663,133244390,133242074,133239119	Gene ID= ENSG00000104419.14 TPM= 33.79 Transcript Type= retained_intron
chr8	133458873	133571887	133458873	133571887	-	transcript3152.chr8.nic@ST3GAL1	transcript3152.chr8.nic	protein_coding	133571693,133545774,133539637,133499135,133475719,133465894,133464778,133463414,133461875,133458873	133571887,133545926,133539729,133499189,133476600,133466090,133464957,133463459,133461994,133459937	Gene ID= ENSG00000008513.14 TPM= 8.69 Transcript Type= NA
chr8	133458945	133571849	133458945	133571849	-	ENST00000522652.5@ST3GAL1	ENST00000522652.5	protein_coding	133571693,133545774,133499135,133476278,133475719,133465894,133464778,133463414,133461875,133458945	133571849,133545926,133499189,133476600,133476074,133466090,133464957,133463459,133461994,133459937	Gene ID= ENSG00000008513.14 TPM= 59.85 Transcript Type= protein_coding
chr8	133456042	133459035	133456042	133459035	-	transcript3163.chr8.nnic@NA	transcript3163.chr8.nnic	NA	133456042	133459035	Gene ID= novel_gene_chr8_3164 TPM= 27.99 Transcript Type= NA
chr8	133569256	133571998	133569256	133571998	-	transcript3165.chr8.nnic@NA	transcript3165.chr8.nnic	NA	133569256	133571998	Gene ID= novel_gene_chr8_3166 TPM= 5.79 Transcript Type= NA
chr8	134477792	134713043	134477792	134713043	-	transcript3171.chr8.nnic@ZFAT	transcript3171.chr8.nnic	protein_coding	134712845,134657561,134637454,134610466,134608729,134601477,134600436,134590268,134588246,134583832,134565333,134532834,134520883,134512475,134509619,134477792	134713043,134657739,134637712,134610650,134608879,134602933,134600668,134590355,134588395,134584005,134565421,134532972,134521001,134512601,134509749,134478721	Gene ID= ENSG00000066827.15 TPM= 2.9 Transcript Type= NA
chr8	134477792	134572677	134477792	134572677	-	transcript3173.chr8.nnic@ZFAT	transcript3173.chr8.nnic	protein_coding	134572546,134565333,134532834,134520883,134512475,134509619,134477792	134572677,134565421,134532972,134521001,134512601,134509749,134478721	Gene ID= ENSG00000066827.15 TPM= 6.76 Transcript Type= NA
chr8	134477792	134574350	134477792	134574350	-	transcript3174.chr8.nnic@ZFAT	transcript3174.chr8.nnic	protein_coding	134573083,134565333,134532834,134520883,134512475,134509619,134477792	134574350,134565421,134532972,134521001,134512601,134509749,134478721	Gene ID= ENSG00000066827.15 TPM= 1.93 Transcript Type= NA
chr8	135457397	135656722	135457397	135656722	+	transcript3181.chr8.nic@KHDRBS3	transcript3181.chr8.nic	protein_coding	135457397,135521237,135542654,135548754,135557448,135581878,135606955,135645059,135646993,135648540,135656226	135457954,135521355,135542770,135548900,135557587,135582073,135607037,135645117,135648121,135648598,135656722	Gene ID= ENSG00000131773.13 TPM= 4.1 Transcript Type= NA
chr8	135457397	135647260	135457397	135647260	+	transcript3191.chr8.nic@KHDRBS3	transcript3191.chr8.nic	protein_coding	135457397,135521237,135542654,135548754,135557448,135581878,135645059,135646993	135457954,135521355,135542770,135548900,135557587,135582073,135645117,135647260	Gene ID= ENSG00000131773.13 TPM= 3.14 Transcript Type= NA
chr8	135457457	135647610	135457457	135647610	+	ENST00000355849.9@KHDRBS3	ENST00000355849.9	protein_coding	135457457,135521237,135542654,135548754,135557448,135581878,135606955,135645059,135646993	135457954,135521355,135542770,135548900,135557587,135582073,135607037,135645117,135647610	Gene ID= ENSG00000131773.13 TPM= 33.79 Transcript Type= protein_coding
chr8	139730345	140457756	139730345	140457756	-	transcript3196.chr8.nnic@TRAPPC9	transcript3196.chr8.nnic	protein_coding	140457639,140450790,140447434,140439052,140435112,140426615,140405577,140397620,140370964,140360050,140311248,140300469,140290993,140287608,140283889,140275658,140252777,140221459,140023937,139988726,139910147,139885879,139731979,139730345	140457756,140451383,140447454,140439197,140435240,140426641,140405698,140397745,140371180,140360193,140311374,140300614,140291078,140287734,140284021,140275821,140252929,140221583,140024079,139988836,139910300,139885969,139732202,139731228	Gene ID= ENSG00000167632.14 TPM= 4.83 Transcript Type= NA
chr8	139730345	140457762	139730345	140457762	-	ENST00000438773.2@TRAPPC9	ENST00000438773.2	protein_coding	140457639,140450790,140439052,140435112,140426615,140405577,140397620,140370964,140360050,140311248,140300469,140290993,140287608,140283889,140275658,140252777,140221459,140023937,139988726,139910147,139885879,139731979,139730345	140457762,140451383,140439197,140435240,140426641,140405698,140397745,140371180,140360193,140311374,140300614,140291078,140287734,140284021,140275821,140252929,140221583,140024079,139988836,139910300,139885969,139732202,139731228	Gene ID= ENSG00000167632.14 TPM= 8.69 Transcript Type= protein_coding
chr8	140511298	140517137	140511298	140517137	+	ENST00000220913.9@CHRAC1	ENST00000220913.9	protein_coding	140511298,140514369,140515126	140511646,140514495,140517137	Gene ID= ENSG00000104472.9 TPM= 5.79 Transcript Type= protein_coding
chr8	140531331	140549711	140531331	140549711	-	transcript3216.chr8.nnic@AGO2	transcript3216.chr8.nnic	protein_coding	140549514,140549114,140547468,140544213,140541164,140539320,140535468,140532416,140531331	140549711,140549298,140547627,140544303,140541358,140539454,140535569,140532615,140532152	Gene ID= ENSG00000123908.11 TPM= 7.24 Transcript Type= NA
chr8	140520156	140635619	140520156	140635619	-	ENST00000220592.9@AGO2	ENST00000220592.9	protein_coding	140635485,140585119,140572812,140562453,140560374,140559395,140558485,140557089,140556167,140555896,140551303,140549114,140547468,140544213,140541164,140539320,140535468,140532416,140520156	140635619,140585311,140572932,140562634,140560510,140559529,140558572,140557236,140556286,140556018,140551436,140549298,140547627,140544303,140541358,140539454,140535569,140532615,140532152	Gene ID= ENSG00000123908.11 TPM= 45.85 Transcript Type= protein_coding
chr8	140658402	141001247	140658402	141001247	-	transcript3241.chr8.nic@PTK2	transcript3241.chr8.nic	protein_coding	141001125,140925661,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140770716,140769575,140764234,140762368,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658402	141001247,140925749,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140770799,140769592,140764290,140762388,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 3.28 Transcript Type= NA
chr8	140658402	141001277	140658402	141001277	-	transcript3244.chr8.nic@PTK2	transcript3244.chr8.nic	protein_coding	141001125,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140769575,140764234,140762368,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140669727,140668269,140664917,140658402	141001277,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140769592,140764290,140762388,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140669735,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 3.28 Transcript Type= NA
chr8	140658405	141001379	140658405	141001379	-	ENST00000519993.5@PTK2	ENST00000519993.5	protein_coding	141001125,140890543,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140769575,140764234,140762368,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140669727,140668269,140664917,140658405	141001379,140890769,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140769592,140764290,140762388,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140669735,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 1.35 Transcript Type= nonsense_mediated_decay
chr8	140658402	141001265	140658402	141001265	-	transcript3256.chr8.nnic@PTK2	transcript3256.chr8.nnic	protein_coding	141001125,140925562,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658402	141001265,140925749,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 2.32 Transcript Type= NA
chr8	140869660	141001264	140869660	141001264	-	transcript3280.chr8.nnic@PTK2	transcript3280.chr8.nnic	protein_coding	141001125,140925661,140890543,140879471,140869660	141001264,140925749,140890769,140879637,140870616	Gene ID= ENSG00000169398.19 TPM= 1.93 Transcript Type= NA
chr8	140920695	141001238	140920695	141001238	-	transcript3284.chr8.nic@PTK2	transcript3284.chr8.nic	protein_coding	141001125,140920695	141001238,140925749	Gene ID= ENSG00000169398.19 TPM= 1.93 Transcript Type= NA
chr8	140721077	140723014	140721077	140723014	-	transcript3285.chr8.nnic@NA	transcript3285.chr8.nnic	NA	140721077	140723014	Gene ID= novel_gene_chr8_3286 TPM= 1.93 Transcript Type= NA
chr8	141389870	141392636	141389870	141392636	-	transcript3345.chr8.nnic@NA	transcript3345.chr8.nnic	NA	141389870	141392636	Gene ID= novel_gene_chr8_3346 TPM= 4.83 Transcript Type= NA
chr8	141421388	141432454	141421388	141432454	+	ENST00000329397.5@PTP4A3	ENST00000329397.5	protein_coding	141421388,141425048,141426939,141427750,141430927	141422345,141425140,141427069,141427824,141432454	Gene ID= ENSG00000184489.11 TPM= 45.5 Transcript Type= protein_coding
chr8	141419573	141422302	141419573	141422302	-	transcript3347.chr8.nnic@NA	transcript3347.chr8.nnic	NA	141419573	141422302	Gene ID= novel_gene_chr8_3348 TPM= 7.72 Transcript Type= NA
chr8	141428544	141431520	141428544	141431520	+	transcript3343.chr8.nnic@NA	transcript3343.chr8.nnic	NA	141428544	141431520	Gene ID= novel_gene_chr8_3344 TPM= 5.79 Transcript Type= NA
chr8	142270475	142276990	142270475	142276990	-	transcript3360.chr8.nnic@TSNARE1	transcript3360.chr8.nnic	protein_coding	142275409,142274781,142270475	142276990,142274863,142271691	Gene ID= ENSG00000171045.14 TPM= 1.93 Transcript Type= NA
chr8	142270475	142403168	142270475	142403168	-	ENST00000519651.5@TSNARE1	ENST00000519651.5	protein_coding	142403104,142354637,142331754,142330901,142318544,142315003,142314384,142300486,142284413,142274781,142270475	142403168,142354763,142331831,142330970,142318634,142315089,142314440,142300647,142284485,142274863,142271691	Gene ID= ENSG00000171045.14 TPM= 1.93 Transcript Type= protein_coding
chr8	142657460	142669994	142657460	142669994	-	ENST00000612905.1@JRK	ENST00000612905.1	protein_coding	142669932,142657460	142669994,142666520	Gene ID= ENSG00000234616.8 TPM= 6.76 Transcript Type= protein_coding
chr8	142700111	142705127	142700111	142705127	+	ENST00000292430.10@LY6K	ENST00000292430.10	protein_coding	142700111,142701600,142703091	142700630,142701713,142705127	Gene ID= ENSG00000160886.13 TPM= 4.83 Transcript Type= protein_coding
chr8	142727267	142736925	142727267	142736925	+	transcript3366.chr8.nnic@THEM6	transcript3366.chr8.nnic	protein_coding	142727267,142728961,142735326	142727859,142729490,142736925	Gene ID= ENSG00000130193.7 TPM= 2.9 Transcript Type= NA
chr8	142727203	142736927	142727203	142736927	+	ENST00000336138.3@THEM6	ENST00000336138.3	protein_coding	142727203,142735326	142727859,142736927	Gene ID= ENSG00000130193.7 TPM= 43.44 Transcript Type= protein_coding
chr8	142771197	142777328	142771197	142777328	-	ENST00000614491.1@LYNX1	ENST00000614491.1	protein_coding	142777106,142775906,142775593,142771197	142777328,142776121,142775694,142775363	Gene ID= ENSG00000180155.19 TPM= 1.93 Transcript Type= protein_coding
chr8	142777616	142778215	142777616	142778215	+	transcript3376.chr8.nnic@NA	transcript3376.chr8.nnic	NA	142777616	142778215	Gene ID= novel_gene_chr8_3377 TPM= 2.9 Transcript Type= NA
chr8	143018482	143022412	143018482	143022412	+	ENST00000292494.10@LY6E	ENST00000292494.10	protein_coding	143018482,143020883,143021314,143021566	143018586,143020991,143021433,143022412	Gene ID= ENSG00000160932.10 TPM= 18.82 Transcript Type= protein_coding
chr8	143018483	143022410	143018483	143022410	+	ENST00000429120.6@LY6E	ENST00000429120.6	protein_coding	143018483,143020888,143021314,143021566	143018586,143020991,143021433,143022410	Gene ID= ENSG00000160932.10 TPM= 6.27 Transcript Type= protein_coding
chr8	143204219	143207371	143204219	143207371	-	transcript3379.chr8.nnic@NA	transcript3379.chr8.nnic	NA	143205633,143204219	143207371,143205574	Gene ID= novel_gene_chr8_3380 TPM= 1.93 Transcript Type= NA
chr8	143213193	143217170	143213193	143217170	+	ENST00000622500.1@GPIHBP1	ENST00000622500.1	protein_coding	143213193,143213822,143215013,143215259	143213319,143213950,143215126,143217170	Gene ID= ENSG00000277494.1 TPM= 9.65 Transcript Type= protein_coding
chr8	143213692	143217170	143213692	143217170	+	transcript3382.chr8.nic@GPIHBP1	transcript3382.chr8.nic	protein_coding	143213692,143215013,143215259	143213950,143215126,143217170	Gene ID= ENSG00000277494.1 TPM= 4.83 Transcript Type= NA
chr8	143267455	143276931	143267455	143276931	+	transcript3390.chr8.nnic@AC138696.1	transcript3390.chr8.nnic	protein_coding	143267455,143274720,143275897	143267484,143274802,143276931	Gene ID= ENSG00000264668.1 TPM= 7.4 Transcript Type= NA
chr8	143251729	143253585	143251729	143253585	+	transcript3393.chr8.nnic@NA	transcript3393.chr8.nnic	NA	143251729	143253585	Gene ID= novel_gene_chr8_3394 TPM= 2.9 Transcript Type= NA
chr8	143266704	143267361	143266704	143267361	-	transcript3395.chr8.nnic@NA	transcript3395.chr8.nnic	NA	143266704	143267361	Gene ID= novel_gene_chr8_3396 TPM= 2.9 Transcript Type= NA
chr8	143267437	143276929	143267437	143276929	+	ENST00000340042.1@GLI4	ENST00000340042.1	protein_coding	143267437,143269360,143274704,143275897	143267484,143269520,143274802,143276929	Gene ID= ENSG00000250571.6 TPM= 11.27 Transcript Type= protein_coding
chr8	143267445	143276928	143267445	143276928	+	transcript3389.chr8.nic@GLI4	transcript3389.chr8.nic	protein_coding	143267445,143269360,143274704	143267484,143269520,143276928	Gene ID= ENSG00000250571.6 TPM= 2.9 Transcript Type= NA
chr8	143269358	143276931	143269358	143276931	+	ENST00000523522.5@GLI4	ENST00000523522.5	protein_coding	143269358,143274704,143275897	143269520,143274802,143276931	Gene ID= ENSG00000250571.6 TPM= 10.3 Transcript Type= protein_coding
chr8	143280828	143281676	143280828	143281676	-	transcript3399.chr8.nic@MINCR	transcript3399.chr8.nic	antisense_RNA	143281482,143281093,143280828	143281676,143281325,143280997	Gene ID= ENSG00000253716.5 TPM= 2.9 Transcript Type= NA
chr8	143280828	143281690	143280828	143281690	-	ENST00000518073.1@MINCR	ENST00000518073.1	antisense_RNA	143281482,143280828	143281690,143280997	Gene ID= ENSG00000253716.5 TPM= 17.38 Transcript Type= antisense_RNA
chr8	143280166	143281660	143280166	143281660	-	ENST00000517411.1@MINCR	ENST00000517411.1	antisense_RNA	143281482,143280882,143280166	143281660,143280997,143280515	Gene ID= ENSG00000253716.5 TPM= 4.83 Transcript Type= antisense_RNA
chr8	143280162	143281678	143280162	143281678	-	transcript3404.chr8.nnic@NA	transcript3404.chr8.nnic	NA	143280162	143281678	Gene ID= novel_gene_chr8_3405 TPM= 1.93 Transcript Type= NA
chr8	143290310	143291318	143290310	143291318	-	transcript3406.chr8.nnic@NA	transcript3406.chr8.nnic	NA	143290310	143291318	Gene ID= novel_gene_chr8_3407 TPM= 2.9 Transcript Type= NA
chr8	143291389	143298061	143291389	143298061	+	ENST00000330143.7@ZNF696	ENST00000330143.7	protein_coding	143291389,143292972,143295740	143291767,143293065,143298061	Gene ID= ENSG00000185730.7 TPM= 11.58 Transcript Type= protein_coding
chr8	143309356	143334855	143309356	143334855	-	transcript3409.chr8.nnic@TOP1MT	transcript3409.chr8.nnic	protein_coding	143334740,143334108,143332487,143331224,143329350,143326222,143325346,143324485,143323999,143321201,143318018,143317723,143315999,143315727,143310068,143309356	143334855,143334285,143332601,143331339,143329471,143326344,143325533,143324629,143324142,143321386,143318086,143317837,143316126,143315821,143310217,143309543	Gene ID= ENSG00000184428.12 TPM= 1.93 Transcript Type= NA
chr8	143309356	143334855	143309356	143334855	-	transcript3411.chr8.nnic@TOP1MT	transcript3411.chr8.nnic	protein_coding	143334740,143334075,143331224,143329350,143326222,143325346,143324485,143323999,143321201,143318018,143317723,143315999,143315727,143310068,143309356	143334855,143334285,143331339,143329471,143326344,143325533,143324629,143324142,143321386,143318086,143317837,143316126,143315821,143310217,143309543	Gene ID= ENSG00000184428.12 TPM= 2.9 Transcript Type= NA
chr8	143309324	143334896	143309324	143334896	-	ENST00000329245.8@TOP1MT	ENST00000329245.8	protein_coding	143334740,143331224,143329350,143326222,143325346,143324485,143323999,143321201,143318018,143317723,143315999,143315727,143310068,143309324	143334896,143331339,143329471,143326344,143325533,143324629,143324142,143321386,143318086,143317837,143316126,143315821,143310217,143309543	Gene ID= ENSG00000184428.12 TPM= 8.69 Transcript Type= protein_coding
chr8	143428060	143430406	143428060	143430406	-	ENST00000333480.2@MAFA	ENST00000333480.2	protein_coding	143428060	143430406	Gene ID= ENSG00000182759.3 TPM= 6.76 Transcript Type= protein_coding
chr8	143437655	143494995	143437655	143494995	-	transcript3436.chr8.nnic@ZC3H3	transcript3436.chr8.nnic	protein_coding	143494712,143475398,143468617,143468382,143468209,143465717,143440936,143440041,143437655	143494995,143475585,143468659,143468540,143468278,143465848,143441120,143440363,143438087	Gene ID= ENSG00000014164.6 TPM= 2.9 Transcript Type= NA
chr8	143437655	143541453	143437655	143541453	-	ENST00000262577.5@ZC3H3	ENST00000262577.5	protein_coding	143541376,143538003,143536257,143507746,143475398,143468617,143468382,143468209,143465717,143440936,143440041,143437655	143541453,143539320,143536453,143507899,143475585,143468659,143468540,143468278,143465848,143441120,143440363,143438087	Gene ID= ENSG00000014164.6 TPM= 34.75 Transcript Type= protein_coding
chr8	143553207	143563062	143553207	143563062	+	ENST00000526406.5@GSDMD	ENST00000526406.5	protein_coding	143553207,143555059,143555934,143558362,143559332,143559777,143560603,143561002,143561370,143561742,143561959,143562209,143562448,143562662	143553760,143555196,143556030,143558451,143559552,143559969,143560771,143561104,143561423,143561828,143562131,143562350,143562521,143563062	Gene ID= ENSG00000104518.10 TPM= 3.38 Transcript Type= protein_coding
chr8	143558307	143563062	143558307	143563062	+	ENST00000262580.8@GSDMD	ENST00000262580.8	protein_coding	143558307,143559332,143559777,143560603,143561002,143561370,143561742,143561959,143562209,143562448,143562662	143558451,143559552,143559969,143560771,143561104,143561423,143561828,143562131,143562350,143562521,143563062	Gene ID= ENSG00000104518.10 TPM= 5.31 Transcript Type= protein_coding
chr8	143574785	143578613	143574785	143578613	-	ENST00000449291.6@NAPRT	ENST00000449291.6	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143575191,143574986,143574785	143578613,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345,143575093,143574900	Gene ID= ENSG00000147813.15 TPM= 30.24 Transcript Type= protein_coding
chr8	143574787	143578352	143574787	143578352	-	transcript3449.chr8.nic@NAPRT	transcript3449.chr8.nic	protein_coding	143578093,143577816,143577657,143577269,143576646,143576078,143575622,143575423,143575191,143574986,143574787	143578352,143577943,143577739,143577399,143576842,143576572,143575702,143575525,143575345,143575093,143574900	Gene ID= ENSG00000147813.15 TPM= 2.25 Transcript Type= NA
chr8	143574787	143578676	143574787	143578676	-	transcript3451.chr8.nic@NAPRT	transcript3451.chr8.nic	protein_coding	143577816,143577657,143576646,143576432,143576078,143575622,143575423,143575191,143574986,143574787	143578676,143577739,143577399,143576572,143576162,143575702,143575525,143575345,143575093,143574900	Gene ID= ENSG00000147813.15 TPM= 2.25 Transcript Type= NA
chr8	143574787	143578343	143574787	143578343	-	ENST00000426292.7@NAPRT	ENST00000426292.7	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143575230,143574986,143574787	143578343,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345,143575093,143574900	Gene ID= ENSG00000147813.15 TPM= 1.93 Transcript Type= protein_coding
chr8	143574785	143578343	143574785	143578343	-	ENST00000435154.7@NAPRT	ENST00000435154.7	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143574785	143578343,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345	Gene ID= ENSG00000147813.15 TPM= 1.93 Transcript Type= protein_coding
chr8	143579728	143597415	143579728	143597415	-	ENST00000442189.6@EEF1D	ENST00000442189.6	protein_coding	143597348,143590608,143588991,143586729,143586219,143581229,143581054,143580506,143580012,143579728	143597415,143590738,143590081,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 38.11 Transcript Type= protein_coding
chr8	143579697	143597675	143579697	143597675	-	ENST00000423316.6@EEF1D	ENST00000423316.6	protein_coding	143597348,143588991,143586729,143586219,143581229,143581054,143580506,143580012,143579697	143597675,143590092,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 74.79 Transcript Type= protein_coding
chr8	143579697	143597675	143579697	143597675	-	ENST00000419152.6@EEF1D	ENST00000419152.6	protein_coding	143597348,143593893,143586729,143586219,143581229,143581054,143580506,143580012,143579697	143597675,143594071,143586849,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 22.47 Transcript Type= protein_coding
chr8	143579728	143597679	143579728	143597679	-	ENST00000395119.7@EEF1D	ENST00000395119.7	protein_coding	143597348,143586729,143586219,143581229,143581054,143580506,143580012,143579728	143597679,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 645.1 Transcript Type= protein_coding
chr8	143579728	143580740	143579728	143580740	-	ENST00000530109.5@EEF1D	ENST00000530109.5	protein_coding	143580506,143580012,143579728	143580740,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 69.32 Transcript Type= protein_coding
chr8	143579728	143597425	143579728	143597425	-	ENST00000528610.5@EEF1D	ENST00000528610.5	protein_coding	143597348,143586729,143581229,143581054,143580506,143580012,143579728	143597425,143586852,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 35.19 Transcript Type= protein_coding
chr8	143579729	143597387	143579729	143597387	-	ENST00000529007.5@EEF1D	ENST00000529007.5	protein_coding	143597348,143586729,143586219,143581229,143581054,143580506,143580012,143579729	143597387,143586852,143586290,143581328,143581154,143580632,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 8.57 Transcript Type= nonsense_mediated_decay
chr8	143579728	143597413	143579728	143597413	-	ENST00000526838.5@EEF1D	ENST00000526838.5	protein_coding	143597348,143586729,143586219,143581286,143581054,143580506,143580012,143579728	143597413,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 6.87 Transcript Type= protein_coding
chr8	143579697	143597388	143579697	143597388	-	ENST00000317198.10@EEF1D	ENST00000317198.10	protein_coding	143596879,143586729,143586219,143581229,143581054,143580506,143580012,143579697	143597388,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 24.4 Transcript Type= protein_coding
chr8	143597437	143600314	143597437	143600314	+	transcript3506.chr8.nnic@NA	transcript3506.chr8.nnic	NA	143597437	143600314	Gene ID= novel_gene_chr8_3507 TPM= 38.61 Transcript Type= NA
chr8	143603913	143609614	143603913	143609614	-	ENST00000220966.10@PYCR3	ENST00000220966.10	protein_coding	143609458,143608062,143606953,143606467,143606062,143603913	143609614,143608126,143607132,143606679,143606154,143605882	Gene ID= ENSG00000104524.13 TPM= 5.79 Transcript Type= protein_coding
chr8	143604219	143609574	143604219	143609574	-	ENST00000495276.5@PYCR3	ENST00000495276.5	protein_coding	143609458,143608062,143606953,143606467,143606062,143604219	143609574,143608126,143607132,143606679,143606154,143605882	Gene ID= ENSG00000104524.13 TPM= 16.41 Transcript Type= protein_coding
chr8	143612618	143617507	143612618	143617507	-	transcript3520.chr8.nnic@TSTA3	transcript3520.chr8.nnic	protein_coding	143617474,143616567,143616106,143614787,143614320,143614164,143613751,143613524,143613196,143612618	143617507,143616723,143616220,143614915,143614453,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 3.28 Transcript Type= NA
chr8	143612618	143617559	143612618	143617559	-	transcript3523.chr8.nic@TSTA3	transcript3523.chr8.nic	protein_coding	143617474,143616567,143616106,143614787,143614320,143614164,143613751,143613524,143613196,143612618	143617559,143616723,143616220,143614915,143614697,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 10.52 Transcript Type= NA
chr8	143612618	143617562	143612618	143617562	-	transcript3526.chr8.nic@TSTA3	transcript3526.chr8.nic	protein_coding	143617474,143616567,143616106,143614320,143614164,143613751,143613524,143613196,143612618	143617562,143616723,143616220,143614915,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 3.76 Transcript Type= NA
chr8	143612618	143617566	143612618	143617566	-	ENST00000425753.6@TSTA3	ENST00000425753.6	protein_coding	143617474,143616567,143616106,143614787,143614624,143614320,143614164,143613751,143613524,143613196,143612618	143617566,143616723,143616220,143614915,143614697,143614453,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 40.45 Transcript Type= protein_coding
chr8	143612618	143617482	143612618	143617482	-	ENST00000529064.5@TSTA3	ENST00000529064.5	protein_coding	143617428,143616567,143616106,143614787,143614624,143614320,143614164,143613751,143613524,143613196,143612618	143617482,143616723,143616220,143614915,143614697,143614453,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 2.8 Transcript Type= protein_coding
chr8	143636013	143652376	143636013	143652376	+	ENST00000526926.5@ZNF623	ENST00000526926.5	protein_coding	143636013,143649898	143636145,143652376	Gene ID= ENSG00000183309.11 TPM= 14.48 Transcript Type= protein_coding
chr8	143696316	143696410	143696316	143696410	+	transcript3535.chr8.nnic@NA	transcript3535.chr8.nnic	NA	143696316	143696410	Gene ID= novel_gene_chr8_3536 TPM= 1.93 Transcript Type= NA
chr8	143790925	143815711	143790925	143815711	-	transcript3540.chr8.nnic@SCRIB	transcript3540.chr8.nnic	protein_coding	143815214,143814001,143813818,143813637,143813470,143813311,143813030,143812817,143812266,143811146,143810906,143810686,143810479,143809551,143808609,143807552,143806924,143806407,143805112,143804955,143804568,143804046,143803647,143803383,143795420,143795277,143795038,143793900,143792976,143792708,143792485,143792220,143791991,143791876,143791666,143791389,143790925	143815711,143814118,143813896,143813726,143813526,143813374,143813104,143812961,143812384,143811345,143811072,143810816,143810604,143809718,143809025,143807614,143807013,143806484,143805435,143805014,143804825,143804156,143803940,143803571,143795530,143795333,143795112,143793962,143793083,143792867,143792635,143792405,143792133,143791913,143791740,143791440,143791308	Gene ID= ENSG00000180900.18 TPM= 9.33 Transcript Type= NA
chr8	143790925	143815711	143790925	143815711	-	transcript3541.chr8.nic@SCRIB	transcript3541.chr8.nic	protein_coding	143815214,143814001,143813818,143813637,143813470,143813311,143813030,143812817,143812266,143811146,143810906,143810686,143810479,143809551,143808609,143806924,143806407,143805112,143804934,143804568,143804046,143803647,143803383,143795420,143795277,143795038,143793900,143792976,143792708,143792485,143792220,143791991,143791876,143791666,143791389,143790925	143815711,143814118,143813896,143813726,143813526,143813374,143813104,143812961,143812384,143811345,143811072,143810816,143810604,143809718,143809025,143807013,143806484,143805435,143805014,143804825,143804156,143803940,143803571,143795530,143795333,143795112,143793962,143793083,143792867,143792635,143792405,143792133,143791913,143791740,143791440,143791308	Gene ID= ENSG00000180900.18 TPM= 17.54 Transcript Type= NA
chr8	143790920	143815379	143790920	143815379	-	ENST00000356994.6@SCRIB	ENST00000356994.6	protein_coding	143815214,143814001,143813818,143813637,143813470,143813311,143813030,143812817,143812266,143811146,143810906,143810686,143810479,143809551,143808609,143807552,143806924,143806407,143805112,143804934,143804568,143804046,143803647,143803383,143795420,143795277,143795038,143793900,143792976,143792708,143792485,143792220,143791991,143791876,143791666,143791389,143790920	143815379,143814118,143813896,143813726,143813526,143813374,143813104,143812961,143812384,143811345,143811072,143810816,143810604,143809718,143809025,143807614,143807013,143806484,143805435,143805014,143804825,143804156,143803940,143803571,143795530,143795333,143795112,143793962,143793083,143792867,143792635,143792405,143792133,143791913,143791740,143791440,143791308	Gene ID= ENSG00000180900.18 TPM= 93.8 Transcript Type= protein_coding
chr8	143816377	143829341	143816377	143829341	-	transcript3549.chr8.nnic@PUF60	transcript3549.chr8.nnic	protein_coding	143829280,143827029,143824313,143821818,143821597,143820666,143818373,143818193,143817862,143817592,143817331,143816910,143816377	143829341,143827167,143824399,143821913,143821686,143820716,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 30.73 Transcript Type= NA
chr8	143816344	143829859	143816344	143829859	-	ENST00000526683.5@PUF60	ENST00000526683.5	protein_coding	143829280,143824313,143821818,143821597,143820666,143818373,143818193,143817862,143817592,143817331,143816910,143816344	143829859,143824399,143821913,143821686,143820716,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 168.28 Transcript Type= protein_coding
chr8	143816377	143829303	143816377	143829303	-	ENST00000456095.6@PUF60	ENST00000456095.6	protein_coding	143829280,143821818,143821597,143820666,143818373,143818193,143817862,143817592,143817331,143816910,143816377	143829303,143821913,143821686,143820716,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 37 Transcript Type= protein_coding
chr8	143816377	143829352	143816377	143829352	-	ENST00000349157.10@PUF60	ENST00000349157.10	protein_coding	143829280,143824313,143821818,143821597,143818373,143818193,143817862,143817592,143817331,143816910,143816377	143829352,143824399,143821913,143821686,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 41.99 Transcript Type= protein_coding
chr8	143977160	143986454	143977160	143986454	-	ENST00000313028.11@PARP10	ENST00000313028.11	protein_coding	143986358,143986055,143985721,143985412,143984544,143984210,143984008,143983167,143982932,143977907,143977160	143986454,143986233,143985975,143985648,143985328,143984431,143984104,143983811,143983065,143978081,143977830	Gene ID= ENSG00000178685.13 TPM= 10.14 Transcript Type= protein_coding
chr8	143977153	143986446	143977153	143986446	-	ENST00000524918.5@PARP10	ENST00000524918.5	protein_coding	143986358,143986055,143985721,143985412,143984544,143984210,143984035,143983167,143982932,143977907,143977153	143986446,143986233,143985975,143985648,143985328,143984431,143984104,143983811,143983065,143978081,143977830	Gene ID= ENSG00000178685.13 TPM= 4.34 Transcript Type= protein_coding
chr8	143990058	143993415	143990058	143993415	+	ENST00000313269.5@GRINA	ENST00000313269.5	protein_coding	143990058,143991200,143991692,143991878,143992245,143992465,143992692	143990311,143991602,143991804,143992078,143992373,143992608,143993415	Gene ID= ENSG00000178719.16 TPM= 12.71 Transcript Type= protein_coding
chr8	143990101	143993415	143990101	143993415	+	transcript3579.chr8.nnic@GRINA	transcript3579.chr8.nnic	protein_coding	143990101,143991692,143991878,143992245,143992465,143992692	143990199,143991804,143992078,143992373,143992608,143993415	Gene ID= ENSG00000178719.16 TPM= 10.3 Transcript Type= NA
chr8	143990100	143993415	143990100	143993415	+	ENST00000395068.8@GRINA	ENST00000395068.8	protein_coding	143990100,143991200,143991692,143991878,143992245,143992465,143992692	143990199,143991602,143991804,143992078,143992373,143992608,143993415	Gene ID= ENSG00000178719.16 TPM= 25.26 Transcript Type= protein_coding
chr8	144051266	144063457	144051266	144063457	-	transcript3582.chr8.nnic@OPLAH	transcript3582.chr8.nnic	protein_coding	144063304,144060653,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144063457,144061257,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 3.86 Transcript Type= NA
chr8	144051266	144063473	144051266	144063473	-	transcript3584.chr8.nnic@OPLAH	transcript3584.chr8.nnic	protein_coding	144063304,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144063473,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 3.86 Transcript Type= NA
chr8	144051266	144063496	144051266	144063496	-	transcript3585.chr8.nnic@OPLAH	transcript3585.chr8.nnic	protein_coding	144063335,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144063496,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 2.9 Transcript Type= NA
chr8	144051266	144063572	144051266	144063572	-	transcript3586.chr8.nnic@OPLAH	transcript3586.chr8.nnic	protein_coding	144063472,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144063572,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 5.79 Transcript Type= NA
chr8	144051266	144060703	144051266	144060703	-	ENST00000618853.4@OPLAH	ENST00000618853.4	protein_coding	144060653,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144060703,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 77.22 Transcript Type= protein_coding
chr8	144060043	144062035	144060043	144062035	+	transcript3599.chr8.nnic@NA	transcript3599.chr8.nnic	NA	144060043	144062035	Gene ID= novel_gene_chr8_3600 TPM= 48.27 Transcript Type= NA
chr8	144078002	144079265	144078002	144079265	-	ENST00000524499.1@AC109322.1	ENST00000524499.1	antisense_RNA	144078002	144079265	Gene ID= ENSG00000255224.1 TPM= 2.9 Transcript Type= antisense_RNA
chr8	144078626	144080647	144078626	144080647	+	ENST00000316052.5@EXOSC4	ENST00000316052.5	protein_coding	144078626,144079943,144080242	144078899,144080149,144080647	Gene ID= ENSG00000178896.8 TPM= 26.06 Transcript Type= protein_coding
chr8	144082592	144086216	144082592	144086216	+	transcript3610.chr8.nic@GPAA1	transcript3610.chr8.nic	protein_coding	144082592,144083124,144083389,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882	144082804,144083303,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216	Gene ID= ENSG00000197858.10 TPM= 10.56 Transcript Type= NA
chr8	144082592	144086216	144082592	144086216	+	transcript3613.chr8.nic@GPAA1	transcript3613.chr8.nic	protein_coding	144082592,144083124,144083389,144083714,144083939,144084134,144084413,144084722,144085573,144085882	144082804,144083303,144083500,144083861,144084040,144084330,144084609,144085479,144085743,144086216	Gene ID= ENSG00000197858.10 TPM= 8.81 Transcript Type= NA
chr8	144082610	144086216	144082610	144086216	+	ENST00000355091.8@GPAA1	ENST00000355091.8	protein_coding	144082610,144083124,144083389,144083714,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882	144082804,144083303,144083500,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216	Gene ID= ENSG00000197858.10 TPM= 153.91 Transcript Type= protein_coding
chr8	144082668	144086216	144082668	144086216	+	ENST00000361036.10@GPAA1	ENST00000361036.10	protein_coding	144082668,144083389,144083714,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882	144082804,144083500,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216	Gene ID= ENSG00000197858.10 TPM= 13.94 Transcript Type= protein_coding
chr8	144095027	144097525	144095027	144097525	+	ENST00000318911.4@CYC1	ENST00000318911.4	protein_coding	144095027,144095833,144096124,144096337,144096584,144097034,144097232	144095228,144096029,144096250,144096494,144096744,144097134,144097525	Gene ID= ENSG00000179091.4 TPM= 1023.6 Transcript Type= protein_coding
chr8	144095039	144097525	144095039	144097525	+	ENST00000533444.1@CYC1	ENST00000533444.1	protein_coding	144095039,144096124,144096337,144096584,144097034,144097232	144096029,144096250,144096494,144096744,144097134,144097525	Gene ID= ENSG00000179091.4 TPM= 32.87 Transcript Type= retained_intron
chr8	144098637	144103765	144098637	144103765	-	transcript3626.chr8.nnic@SHARPIN	transcript3626.chr8.nnic	protein_coding	144103553,144103051,144099929,144099703,144099510,144099277,144099081,144098866,144098637	144103765,144103225,144100069,144099844,144099618,144099430,144099121,144098994,144098788	Gene ID= ENSG00000179526.16 TPM= 2.9 Transcript Type= NA
chr8	144098637	144104915	144098637	144104915	-	transcript3641.chr8.nic@SHARPIN	transcript3641.chr8.nic	protein_coding	144103553,144103051,144099929,144099703,144099510,144099081,144098866,144098637	144104915,144103225,144100069,144099844,144099618,144099430,144098994,144098788	Gene ID= ENSG00000179526.16 TPM= 8.69 Transcript Type= NA
chr8	144098637	144104245	144098637	144104245	-	transcript3658.chr8.nic@SHARPIN	transcript3658.chr8.nic	protein_coding	144103553,144103051,144099929,144099703,144099510,144099277,144098637	144104245,144103225,144100069,144099844,144099618,144099430,144098994	Gene ID= ENSG00000179526.16 TPM= 10.62 Transcript Type= NA
chr8	144098637	144104190	144098637	144104190	-	ENST00000398712.6@SHARPIN	ENST00000398712.6	protein_coding	144103553,144103051,144099929,144099703,144099510,144099277,144099081,144098866,144098637	144104190,144103225,144100069,144099844,144099618,144099430,144099205,144098994,144098788	Gene ID= ENSG00000179526.16 TPM= 76.26 Transcript Type= protein_coding
chr8	144098637	144104237	144098637	144104237	-	ENST00000359551.6@SHARPIN	ENST00000359551.6	protein_coding	144103553,144103051,144099929,144099703,144099510,144099277,144098866,144098637	144104237,144103225,144100069,144099844,144099618,144099430,144098994,144098788	Gene ID= ENSG00000179526.16 TPM= 30.89 Transcript Type= nonsense_mediated_decay
chr8	144104451	144107611	144104451	144107611	+	transcript3652.chr8.nic@MAF1	transcript3652.chr8.nic	protein_coding	144104451,144105640,144105869,144106076,144106343,144106555,144106835	144104858,144105766,144105997,144106241,144106464,144106674,144107611	Gene ID= ENSG00000179632.9 TPM= 46.98 Transcript Type= NA
chr8	144104499	144107611	144104499	144107611	+	ENST00000322428.9@MAF1	ENST00000322428.9	protein_coding	144104499,144105640,144105869,144106076,144106343,144106555,144106835,144107088	144104858,144105766,144105997,144106241,144106464,144106674,144106963,144107611	Gene ID= ENSG00000179632.9 TPM= 742.25 Transcript Type= protein_coding
chr8	144104512	144107611	144104512	144107611	+	ENST00000534585.5@MAF1	ENST00000534585.5	protein_coding	144104512,144105640,144105869,144106076,144106343,144106835,144107088	144104858,144105766,144105997,144106241,144106674,144106963,144107611	Gene ID= ENSG00000179632.9 TPM= 25.02 Transcript Type= protein_coding
chr8	144137747	144140713	144137747	144140713	+	transcript3694.chr8.nic@HGH1	transcript3694.chr8.nic	protein_coding	144137747,144138507,144138715,144139189,144139388	144138428,144138607,144139100,144139311,144140713	Gene ID= ENSG00000235173.6 TPM= 2.41 Transcript Type= NA
chr8	144137769	144140843	144137769	144140843	+	ENST00000347708.4@HGH1	ENST00000347708.4	protein_coding	144137769,144138507,144138715,144139009,144139189,144139388	144138428,144138607,144138813,144139100,144139311,144140843	Gene ID= ENSG00000235173.6 TPM= 9.17 Transcript Type= protein_coding
chr8	144262102	144291370	144262102	144291370	-	ENST00000569669.5@BOP1	ENST00000569669.5	protein_coding	144291272,144289095,144276224,144264917,144264714,144264515,144264225,144263981,144263831,144263692,144263478,144263221,144262853,144262588,144262396,144262102	144291370,144289304,144276304,144265071,144264831,144264616,144264437,144264142,144263911,144263761,144263610,144263401,144263141,144262672,144262503,144262317	Gene ID= ENSG00000261236.7 TPM= 203.68 Transcript Type= protein_coding
chr8	144291554	144314716	144291554	144314716	+	transcript3725.chr8.nic@HSF1	transcript3725.chr8.nic	protein_coding	144291554,144308906,144309455,144309772,144311174,144311321,144311505,144311700,144311963,144312628,144313511,144313846,144313985,144314125	144291874,144309014,144309591,144309896,144311249,144311382,144311601,144311836,144312244,144312711,144313616,144313911,144314054,144314716	Gene ID= ENSG00000185122.10 TPM= 19.47 Transcript Type= NA
chr8	144291550	144293245	144291550	144293245	+	transcript3742.chr8.nic@HSF1	transcript3742.chr8.nic	protein_coding	144291550,144292483	144291874,144293245	Gene ID= ENSG00000185122.10 TPM= 6.76 Transcript Type= NA
chr8	144291598	144314722	144291598	144314722	+	ENST00000528838.5@HSF1	ENST00000528838.5	protein_coding	144291598,144308906,144309455,144309772,144311174,144311321,144311505,144311700,144311963,144313511,144313846,144313985,144314125	144291874,144309014,144309591,144309896,144311249,144311382,144311601,144311836,144312244,144313616,144313911,144314054,144314722	Gene ID= ENSG00000185122.10 TPM= 192.74 Transcript Type= protein_coding
chr8	144316320	144326892	144316320	144326892	-	transcript3720.chr8.nic@DGAT1	transcript3720.chr8.nic	protein_coding	144326437,144321321,144319028,144318835,144318699,144318461,144318261,144318095,144317914,144317784,144317671,144317544,144317333,144317022,144316853,144316320	144326892,144321408,144319068,144318920,144318751,144318566,144318362,144318169,144318017,144317822,144317712,144317588,144317445,144317252,144316915,144316709	Gene ID= ENSG00000185000.11 TPM= 3.86 Transcript Type= NA
chr8	144355431	144358472	144355431	144358472	-	transcript3751.chr8.nnic@FBXL6	transcript3751.chr8.nnic	protein_coding	144357628,144356990,144356808,144356600,144356300,144355968,144355431	144358472,144357121,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 5.65 Transcript Type= NA
chr8	144355431	144358515	144355431	144358515	-	transcript3754.chr8.nic@FBXL6	transcript3754.chr8.nic	protein_coding	144356990,144356808,144356600,144356300,144355968,144355431	144358515,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 9.03 Transcript Type= NA
chr8	144355431	144358521	144355431	144358521	-	transcript3760.chr8.nic@FBXL6	transcript3760.chr8.nic	protein_coding	144356808,144356300,144355968,144355431	144358521,144356713,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 2.99 Transcript Type= NA
chr8	144355431	144358512	144355431	144358512	-	ENST00000331890.5@FBXL6	ENST00000331890.5	protein_coding	144358032,144357628,144357439,144356990,144356808,144356600,144356300,144355968,144355431	144358512,144357786,144357502,144357121,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 10.47 Transcript Type= protein_coding
chr8	144355431	144358472	144355431	144358472	-	ENST00000455319.6@FBXL6	ENST00000455319.6	protein_coding	144358032,144357628,144357457,144356990,144356808,144356600,144356300,144355968,144355431	144358472,144357786,144357502,144357121,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 2.75 Transcript Type= protein_coding
chr8	144358587	144361272	144358587	144361272	+	transcript3763.chr8.nnic@SLC52A2	transcript3763.chr8.nnic	protein_coding	144358587,144359184,144359623,144360115,144360590,144360803	144359065,144359423,144359726,144360493,144360713,144361272	Gene ID= ENSG00000185803.8 TPM= 1.93 Transcript Type= NA
chr8	144358557	144361270	144358557	144361270	+	ENST00000530047.5@SLC52A2	ENST00000530047.5	protein_coding	144358557,144359184,144359623,144360590,144360803	144358610,144359423,144360493,144360713,144361270	Gene ID= ENSG00000185803.8 TPM= 3.86 Transcript Type= protein_coding
chr8	144358593	144361272	144358593	144361272	+	ENST00000329994.6@SLC52A2	ENST00000329994.6	protein_coding	144358593,144359184,144359623,144360590,144360803	144358783,144359423,144360493,144360713,144361272	Gene ID= ENSG00000185803.8 TPM= 12.07 Transcript Type= protein_coding
chr8	144358593	144361272	144358593	144361272	+	transcript3775.chr8.nic@SLC52A2	transcript3775.chr8.nic	protein_coding	144358593,144359623,144360590,144360803	144359423,144360493,144360713,144361272	Gene ID= ENSG00000185803.8 TPM= 5.31 Transcript Type= NA
chr8	144358593	144361241	144358593	144361241	+	ENST00000532887.5@SLC52A2	ENST00000532887.5	protein_coding	144358593,144359184,144359623,144360590,144360803	144359065,144359423,144360493,144360713,144361241	Gene ID= ENSG00000185803.8 TPM= 19.31 Transcript Type= protein_coding
chr8	144374052	144393236	144374052	144393236	+	ENST00000308860.10@ADCK5	ENST00000308860.10	protein_coding	144374052,144379387,144383081,144390671,144390856,144391134,144391361,144391580,144391783,144391941,144392092,144392254,144392445,144392776,144392969	144374107,144379490,144383230,144390746,144391056,144391274,144391474,144391711,144391866,144392022,144392170,144392345,144392697,144392892,144393236	Gene ID= ENSG00000173137.11 TPM= 8.69 Transcript Type= protein_coding
chr8	144393231	144409349	144393231	144409349	-	ENST00000616140.1@CPSF1	ENST00000616140.1	protein_coding	144409289,144409015,144401646,144401430,144401211,144400924,144400671,144400354,144400166,144399992,144399781,144399588,144399452,144399276,144399128,144398958,144398779,144398525,144398302,144397954,144397743,144397487,144397207,144396840,144396598,144396348,144395435,144395265,144395098,144394882,144394644,144394379,144394234,144394113,144393883,144393667,144393452,144393231	144409349,144409172,144401673,144401563,144401291,144401075,144400817,144400493,144400276,144400085,144399868,144399710,144399503,144399373,144399202,144399038,144398868,144398638,144398443,144398132,144397879,144397661,144397413,144396929,144396741,144396500,144395551,144395355,144395182,144395023,144394796,144394555,144394300,144394160,144394038,144393796,144393590,144393365	Gene ID= ENSG00000071894.16 TPM= 50.2 Transcript Type= protein_coding
chr8	144412414	144413586	144412414	144413586	-	ENST00000532718.5@SLC39A4	ENST00000532718.5	protein_coding	144413513,144413237,144412759,144412414	144413586,144413389,144412946,144412666	Gene ID= ENSG00000147804.9 TPM= 4.83 Transcript Type= processed_transcript
chr8	144412414	144413569	144412414	144413569	-	ENST00000530807.5@SLC39A4	ENST00000530807.5	protein_coding	144413513,144412759,144412414	144413569,144412946,144412666	Gene ID= ENSG00000147804.9 TPM= 1.93 Transcript Type= processed_transcript
chr8	144423617	144428568	144423617	144428568	-	transcript3788.chr8.nnic@VPS28	transcript3788.chr8.nnic	protein_coding	144428489,144426909,144426180,144426026,144425683,144424946,144424718,144424215,144424041,144423617	144428568,144426979,144426208,144426063,144425772,144425040,144424819,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 7.43 Transcript Type= NA
chr8	144423601	144428563	144423601	144428563	-	ENST00000292510.5@VPS28	ENST00000292510.5	protein_coding	144428489,144426909,144426180,144426026,144425683,144424946,144424718,144424215,144424041,144423601	144428563,144426979,144426208,144426063,144425772,144425051,144424819,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 85.82 Transcript Type= protein_coding
chr8	144423617	144426983	144423617	144426983	-	ENST00000526054.5@VPS28	ENST00000526054.5	protein_coding	144426909,144426180,144426026,144425683,144424946,144424718,144424215,144424041,144423617	144426983,144426208,144426063,144425772,144425051,144424819,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 11.49 Transcript Type= protein_coding
chr8	144423617	144426983	144423617	144426983	-	ENST00000529182.5@VPS28	ENST00000529182.5	protein_coding	144426909,144426180,144426026,144425683,144424946,144424718,144424215,144423617	144426983,144426208,144426063,144425772,144425051,144424819,144424268,144424132	Gene ID= ENSG00000160948.13 TPM= 5.11 Transcript Type= protein_coding
chr8	144451123	144462859	144451123	144462859	-	transcript3817.chr8.nnic@CYHR1	transcript3817.chr8.nnic	protein_coding	144462283,144453222,144452359,144451123	144462859,144453460,144452570,144451829	Gene ID= ENSG00000187954.12 TPM= 2.9 Transcript Type= NA
chr8	144463817	144465489	144463817	144465489	-	ENST00000403000.6@CYHR1	ENST00000403000.6	protein_coding	144464809,144463817	144465489,144464612	Gene ID= ENSG00000187954.12 TPM= 6.27 Transcript Type= protein_coding
chr8	144449931	144462861	144449931	144462861	-	ENST00000530374.5@CYHR1	ENST00000530374.5	protein_coding	144462283,144453222,144452359,144449931	144462861,144453460,144452570,144450770	Gene ID= ENSG00000187954.12 TPM= 25.1 Transcript Type= protein_coding
chr8	144463817	144465677	144463817	144465677	-	ENST00000306145.9@CYHR1	ENST00000306145.9	protein_coding	144465353,144464809,144463817	144465677,144465096,144464612	Gene ID= ENSG00000187954.12 TPM= 17.86 Transcript Type= protein_coding
chr8	144477986	144502121	144477986	144502121	+	transcript3827.chr8.nic@PPP1R16A	transcript3827.chr8.nic	protein_coding	144477986,144490034,144496461,144498770,144498916,144500096,144500267,144500487,144500686,144500842,144501129,144501520	144478127,144490212,144497453,144498840,144499061,144500199,144500391,144500612,144500761,144500971,144501294,144502121	Gene ID= ENSG00000160972.9 TPM= 18.34 Transcript Type= NA
chr8	144501089	144502120	144501089	144502120	+	ENST00000528430.2@PPP1R16A	ENST00000528430.2	protein_coding	144501089,144501520	144501294,144502120	Gene ID= ENSG00000160972.9 TPM= 13.51 Transcript Type= retained_intron
chr8	144494091	144497085	144494091	144497085	-	transcript3841.chr8.nnic@NA	transcript3841.chr8.nnic	NA	144494091	144497085	Gene ID= novel_gene_chr8_3842 TPM= 5.79 Transcript Type= NA
chr8	144502973	144507174	144502973	144507174	+	ENST00000528431.5@GPT	ENST00000528431.5	protein_coding	144502973,144504301,144504604,144504771,144504998,144505246,144505848,144505995,144506232,144506501,144506731,144506910	144503125,144504466,144504693,144504879,144505131,144505489,144505927,144506131,144506406,144506656,144506843,144507174	Gene ID= ENSG00000167701.13 TPM= 1.93 Transcript Type= protein_coding
chr8	144504082	144507171	144504082	144507171	+	ENST00000394955.2@GPT	ENST00000394955.2	protein_coding	144504082,144504604,144504771,144504998,144505246,144505848,144505995,144506232,144506501,144506731,144506910	144504466,144504693,144504879,144505131,144505489,144505927,144506131,144506406,144506656,144506843,144507171	Gene ID= ENSG00000167701.13 TPM= 6.76 Transcript Type= protein_coding
chr8	144508767	144511204	144508767	144511204	+	transcript3849.chr8.nic@MFSD3	transcript3849.chr8.nic	protein_coding	144508767,144510360,144510598,144510794	144510015,144510507,144510722,144511204	Gene ID= ENSG00000167700.8 TPM= 2.9 Transcript Type= NA
chr8	144509064	144511213	144509064	144511213	+	transcript3851.chr8.nic@MFSD3	transcript3851.chr8.nic	protein_coding	144509064,144510598,144510794,144510991	144510015,144510722,144510903,144511213	Gene ID= ENSG00000167700.8 TPM= 4.83 Transcript Type= NA
chr8	144509064	144511204	144509064	144511204	+	transcript3852.chr8.nic@MFSD3	transcript3852.chr8.nic	protein_coding	144509064,144510598,144510794	144510015,144510722,144511204	Gene ID= ENSG00000167700.8 TPM= 1.93 Transcript Type= NA
chr8	144509097	144511204	144509097	144511204	+	transcript3853.chr8.nic@MFSD3	transcript3853.chr8.nic	protein_coding	144509097,144510794	144510722,144511204	Gene ID= ENSG00000167700.8 TPM= 1.93 Transcript Type= NA
chr8	144509074	144511213	144509074	144511213	+	ENST00000301327.4@MFSD3	ENST00000301327.4	protein_coding	144509074,144510360,144510598,144510794,144510991	144510015,144510507,144510722,144510903,144511213	Gene ID= ENSG00000167700.8 TPM= 27.99 Transcript Type= protein_coding
chr8	144511288	144517845	144511288	144517845	-	ENST00000621189.4@RECQL4	ENST00000621189.4	protein_coding	144517602,144517414,144517050,144515988,144515764,144515326,144515150,144514936,144514442,144514189,144513928,144513571,144513218,144512847,144512642,144512392,144512144,144511911,144511681,144511288	144517845,144517508,144517190,144516764,144515890,144515457,144515242,144515072,144514525,144514362,144514107,144513712,144513480,144513138,144512771,144512561,144512324,144512067,144511789,144511555	Gene ID= ENSG00000160957.12 TPM= 2.9 Transcript Type= protein_coding
chr8	144517961	144522024	144517961	144522024	+	transcript3859.chr8.nic@LRRC14	transcript3859.chr8.nic	protein_coding	144517961,144519701,144520238,144520911	144518041,144520054,144520822,144522024	Gene ID= ENSG00000160959.7 TPM= 1.93 Transcript Type= NA
chr8	144518005	144522024	144518005	144522024	+	ENST00000529022.5@LRRC14	ENST00000529022.5	protein_coding	144518005,144518749,144519615,144520238,144520911	144518041,144518815,144520054,144520822,144522024	Gene ID= ENSG00000160959.7 TPM= 1.93 Transcript Type= protein_coding
chr8	144521556	144523889	144521556	144523889	+	transcript3874.chr8.nnic@NA	transcript3874.chr8.nnic	NA	144521556	144523889	Gene ID= novel_gene_chr8_3875 TPM= 8.69 Transcript Type= NA
chr8	144522377	144529115	144522377	144529115	-	transcript3854.chr8.nic@LRRC24	transcript3854.chr8.nic	protein_coding	144528761,144528024,144526960,144524816,144524441,144524110,144522377	144529115,144528072,144527787,144525033,144524719,144524278,144523409	Gene ID= ENSG00000254402.6 TPM= 2.9 Transcript Type= NA
chr8	144526252	144529132	144526252	144529132	-	ENST00000534680.5@C8orf82	ENST00000534680.5	protein_coding	144528761,144528024,144526960,144526252	144529132,144528072,144527787,144526639	Gene ID= ENSG00000213563.6 TPM= 25.1 Transcript Type= nonsense_mediated_decay
chr8	144525733	144529132	144525733	144529132	-	ENST00000524821.5@C8orf82	ENST00000524821.5	protein_coding	144528761,144528024,144525733	144529132,144528072,144527787	Gene ID= ENSG00000213563.6 TPM= 63.71 Transcript Type= protein_coding
chr8	144721129	144755605	144721129	144755605	-	ENST00000292562.11@ZNF251	ENST00000292562.11	protein_coding	144755405,144754696,144754192,144753683,144721129	144755605,144754803,144754321,144753796,144723382	Gene ID= ENSG00000198169.8 TPM= 1.93 Transcript Type= protein_coding
chr8	144720912	144755434	144720912	144755434	-	transcript3882.chr8.nic@ZNF251	transcript3882.chr8.nic	protein_coding	144754696,144754192,144753683,144720912	144755434,144754321,144753796,144723382	Gene ID= ENSG00000198169.8 TPM= 3.86 Transcript Type= NA
chr8	144752702	144753297	144752702	144753297	+	transcript3887.chr8.nnic@NA	transcript3887.chr8.nnic	NA	144752702	144753297	Gene ID= novel_gene_chr8_3888 TPM= 1.93 Transcript Type= NA
chr8	144772224	144787346	144772224	144787346	-	transcript3892.chr8.nnic@ZNF34	transcript3892.chr8.nnic	protein_coding	144787279,144780875,144780228,144778439,144778038,144777458,144772224	144787346,144780965,144780280,144778525,144778164,144777577,144774605	Gene ID= ENSG00000196378.11 TPM= 3.86 Transcript Type= NA
chr8	144773120	144787346	144773120	144787346	-	transcript3900.chr8.nnic@ZNF34	transcript3900.chr8.nnic	protein_coding	144787279,144780875,144780228,144778439,144778038,144773120	144787346,144780965,144780280,144778525,144778164,144774605	Gene ID= ENSG00000196378.11 TPM= 3.21 Transcript Type= NA
chr8	144773114	144787325	144773114	144787325	-	ENST00000429371.6@ZNF34	ENST00000429371.6	protein_coding	144787279,144780228,144778439,144778038,144777458,144773114	144787325,144780280,144778525,144778164,144777577,144774605	Gene ID= ENSG00000196378.11 TPM= 3.21 Transcript Type= protein_coding
chr8	144789769	144792389	144789769	144792389	-	ENST00000394920.6@RPL8	ENST00000394920.6	protein_coding	144792245,144791992,144791773,144791277,144790355,144789769	144792389,144792140,144791914,144791495,144790470,144789962	Gene ID= ENSG00000161016.17 TPM= 460.62 Transcript Type= protein_coding
chr8	144789770	144792587	144789770	144792587	-	ENST00000262584.7@RPL8	ENST00000262584.7	protein_coding	144792366,144791992,144791773,144791277,144790355,144789770	144792587,144792140,144791914,144791495,144790470,144789962	Gene ID= ENSG00000161016.17 TPM= 1004.57 Transcript Type= protein_coding
chr8	144789768	144791959	144789768	144791959	-	ENST00000526668.5@RPL8	ENST00000526668.5	protein_coding	144791773,144791277,144790355,144789768	144791959,144791495,144790470,144789962	Gene ID= ENSG00000161016.17 TPM= 382.58 Transcript Type= retained_intron
chr8	144789785	144792351	144789785	144792351	-	ENST00000528957.5@RPL8	ENST00000528957.5	protein_coding	144791992,144791773,144791277,144790355,144789785	144792351,144791914,144791495,144790470,144789962	Gene ID= ENSG00000161016.17 TPM= 13.35 Transcript Type= protein_coding
chr8	144806864	144808802	144806864	144808802	-	transcript3917.chr8.nnic@NA	transcript3917.chr8.nnic	NA	144806864	144808802	Gene ID= novel_gene_chr8_3918 TPM= 4.83 Transcript Type= NA
chr8	144827560	144838962	144827560	144838962	+	transcript3938.chr8.nic@ZNF7	transcript3938.chr8.nic	protein_coding	144827560,144829043,144837391	144827609,144829604,144838962	Gene ID= ENSG00000147789.15 TPM= 1.93 Transcript Type= NA
chr8	144827555	144843220	144827555	144843220	+	transcript3939.chr8.nnic@ZNF7	transcript3939.chr8.nnic	protein_coding	144827555,144837391,144841355	144827609,144837507,144843220	Gene ID= ENSG00000147789.15 TPM= 2.58 Transcript Type= NA
chr8	144827518	144843222	144827518	144843222	+	ENST00000544249.2@ZNF7	ENST00000544249.2	protein_coding	144827518,144829043,144837391,144841355	144827609,144829090,144837507,144843222	Gene ID= ENSG00000147789.15 TPM= 5.47 Transcript Type= protein_coding
chr8	144827559	144843220	144827559	144843220	+	ENST00000446747.6@ZNF7	ENST00000446747.6	protein_coding	144827559,144829043,144829445,144837391,144841355	144827609,144829090,144829604,144837507,144843220	Gene ID= ENSG00000147789.15 TPM= 12.23 Transcript Type= protein_coding
chr8	144850166	144853067	144850166	144853067	-	ENST00000402718.4@COMMD5	ENST00000402718.4	protein_coding	144852993,144850166	144853067,144851395	Gene ID= ENSG00000170619.9 TPM= 7.24 Transcript Type= protein_coding
chr8	144850188	144853736	144850188	144853736	-	ENST00000450361.2@COMMD5	ENST00000450361.2	protein_coding	144853372,144850188	144853736,144851395	Gene ID= ENSG00000170619.9 TPM= 9.65 Transcript Type= protein_coding
chr8	144850167	144853067	144850167	144853067	-	ENST00000543949.2@COMMD5	ENST00000543949.2	protein_coding	144852726,144850167	144853067,144851395	Gene ID= ENSG00000170619.9 TPM= 1.45 Transcript Type= protein_coding
chr8	144850219	144853034	144850219	144853034	-	ENST00000305103.3@COMMD5	ENST00000305103.3	protein_coding	144852839,144850219	144853034,144851395	Gene ID= ENSG00000170619.9 TPM= 1.93 Transcript Type= protein_coding
chr8	144930358	144950888	144930358	144950888	-	ENST00000276816.8@ZNF16	ENST00000276816.8	protein_coding	144950797,144947940,144946011,144930358	144950888,144948025,144946215,144932590	Gene ID= ENSG00000170631.14 TPM= 3.86 Transcript Type= protein_coding
chr8	145052378	145056030	145052378	145056030	+	ENST00000331434.6@C8orf33	ENST00000331434.6	protein_coding	145052378,145052586,145053062,145053297,145054018	145052497,145052897,145053146,145053443,145056030	Gene ID= ENSG00000182307.12 TPM= 28.96 Transcript Type= protein_coding
chr8	145052467	145056030	145052467	145056030	+	ENST00000530455.5@C8orf33	ENST00000530455.5	protein_coding	145052467,145053062,145053297,145054018	145052897,145053146,145053443,145056030	Gene ID= ENSG00000182307.12 TPM= 18.34 Transcript Type= retained_intron
chr9	14521	25007	14521	25007	-	transcript1.chr9.nnic@WASHC1	transcript1.chr9.nnic	protein_coding	24851,18381,18028,17719,17344,16965,16718,15909,15081,14521	25007,18479,18174,17855,17479,17166,16876,16061,15149,14940	Gene ID= ENSG00000181404.15 TPM= 20.75 Transcript Type= NA
chr9	14521	29739	14521	29739	-	ENST00000442898.4@WASHC1	ENST00000442898.4	protein_coding	29602,24851,18381,18028,17719,17344,16965,16718,15909,15081,14521	29739,25004,18492,18174,17855,17479,17166,16876,16061,15149,14940	Gene ID= ENSG00000181404.15 TPM= 120.18 Transcript Type= protein_coding
chr9	121041	179088	121041	179088	-	transcript5.chr9.nic@CBWD1	transcript5.chr9.nic	protein_coding	178816,175698,173270,172081,163978,162432,156481,154709,152034,151305,146102,134979,123386,123217,121961,121041	179088,175784,173366,172172,164037,162469,156527,154795,152078,151427,146158,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 1.93 Transcript Type= NA
chr9	121041	179147	121041	179147	-	ENST00000377400.8@CBWD1	ENST00000377400.8	protein_coding	178816,175698,173270,172081,163978,162432,156481,154709,152034,146102,134979,123386,123217,121961,121041	179147,175784,173366,172172,164037,162469,156527,154795,152078,146158,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 59.85 Transcript Type= protein_coding
chr9	121041	179019	121041	179019	-	transcript12.chr9.nnic@CBWD1	transcript12.chr9.nnic	protein_coding	178816,175698,173270,172081,163978,162432,156481,154709,146102,134979,123386,123217,121961,121041	179019,175784,173366,172172,164037,162469,156527,154795,146158,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 1.93 Transcript Type= NA
chr9	121411	179088	121411	179088	-	transcript19.chr9.nnic@CBWD1	transcript19.chr9.nnic	protein_coding	178816,175698,173270,172081,163978,162432,156481,154709,134979,123386,123217,121961,121411	179088,175784,173366,172172,164037,162469,156527,154795,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 4.83 Transcript Type= NA
chr9	121060	179047	121060	179047	-	ENST00000314367.14@CBWD1	ENST00000314367.14	protein_coding	178816,177723,175698,173270,172081,163978,162432,156481,154709,152034,146102,134979,123386,123217,121961,121060	179047,177820,175784,173366,172172,164037,162469,156527,154795,152078,146158,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 9.65 Transcript Type= protein_coding
chr9	121409	179021	121409	179021	-	ENST00000382447.8@CBWD1	ENST00000382447.8	protein_coding	178816,175698,173270,172081,163978,162432,156481,154709,152034,134979,123386,123217,121961,121409	179021,175784,173366,172172,164037,162469,156527,154795,152078,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 2.9 Transcript Type= protein_coding
chr9	686764	746102	686764	746102	+	transcript35.chr9.nnic@KANK1	transcript35.chr9.nnic	protein_coding	686764,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	686921,713464,730248,731266,732617,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 9.43 Transcript Type= NA
chr9	693653	746102	693653	746102	+	transcript37.chr9.nnic@KANK1	transcript37.chr9.nnic	protein_coding	693653,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	693786,713464,730248,731266,732617,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 89.68 Transcript Type= NA
chr9	706889	746103	706889	746103	+	ENST00000382293.7@KANK1	ENST00000382293.7	protein_coding	706889,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	707247,713464,730248,731266,732617,734835,738504,740934,742405,744589,746103	Gene ID= ENSG00000107104.18 TPM= 18.01 Transcript Type= protein_coding
chr9	693653	746104	693653	746104	+	transcript43.chr9.nnic@KANK1	transcript43.chr9.nnic	protein_coding	693653,710804,730051,731158,732378,734748,738285,740792,742205,744491	693786,713464,730248,731266,732617,734835,738504,740934,742405,746104	Gene ID= ENSG00000107104.18 TPM= 14.6 Transcript Type= NA
chr9	693653	746102	693653	746102	+	transcript45.chr9.nnic@KANK1	transcript45.chr9.nnic	protein_coding	693653,710804,730051,731158,734748,738285,740792,742205,744491,745173	693786,713464,730248,731266,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 17.81 Transcript Type= NA
chr9	722885	746102	722885	746102	+	transcript51.chr9.nnic@KANK1	transcript51.chr9.nnic	protein_coding	722885,730051,731158,732378,734748,738285,740792,742205,744491,745173	722928,730248,731266,732617,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 9.19 Transcript Type= NA
chr9	504716	746105	504716	746105	+	ENST00000382297.6@KANK1	ENST00000382297.6	protein_coding	504716,676890,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	504754,677009,713464,730248,731266,732617,734835,738504,740934,742405,744589,746105	Gene ID= ENSG00000107104.18 TPM= 27.38 Transcript Type= protein_coding
chr9	693682	696263	693682	696263	+	transcript67.chr9.nnic@NA	transcript67.chr9.nnic	NA	693682	696263	Gene ID= novel_gene_chr9_68 TPM= 1.93 Transcript Type= NA
chr9	1050339	1055872	1050339	1055872	+	transcript69.chr9.nic@DMRT2	transcript69.chr9.nic	protein_coding	1050339,1051570,1053722,1055722	1050482,1052138,1053824,1055872	Gene ID= ENSG00000173253.15 TPM= 2.9 Transcript Type= NA
chr9	2017492	2193574	2017492	2193574	+	transcript74.chr9.nic@SMARCA2	transcript74.chr9.nic	protein_coding	2017492,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2181571,2182141,2186096,2191266,2192704	2017799,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2181676,2182242,2186228,2191408,2193574	Gene ID= ENSG00000080503.22 TPM= 18.34 Transcript Type= NA
chr9	2157683	2193574	2157683	2193574	+	ENST00000324954.10@SMARCA2	ENST00000324954.10	protein_coding	2157683,2161686,2181571,2182141,2186096,2191266,2192704	2157890,2161903,2181676,2182242,2186228,2191408,2193574	Gene ID= ENSG00000080503.22 TPM= 5.79 Transcript Type= protein_coding
chr9	2804164	2844241	2804164	2844241	-	ENST00000397885.2@PUM3	ENST00000397885.2	protein_coding	2844045,2838426,2837180,2834031,2833357,2831251,2830962,2829774,2828675,2827073,2824717,2823781,2820018,2812220,2811361,2810344,2807814,2804164	2844241,2838517,2837401,2834166,2833432,2831344,2831028,2829948,2828778,2827151,2824815,2823834,2820098,2812362,2811583,2810431,2807904,2804463	Gene ID= ENSG00000080608.9 TPM= 29.92 Transcript Type= protein_coding
chr9	4662315	4665258	4662315	4665258	+	ENST00000381883.3@PLPP6	ENST00000381883.3	protein_coding	4662315	4665258	Gene ID= ENSG00000205808.5 TPM= 7.72 Transcript Type= protein_coding
chr9	4679566	4708398	4679566	4708398	+	ENST00000381854.3@CDC37L1	ENST00000381854.3	protein_coding	4679566,4684877,4688513,4697096,4697757,4701864,4706011	4679899,4685158,4688606,4697211,4697879,4702028,4708398	Gene ID= ENSG00000106993.11 TPM= 33.79 Transcript Type= protein_coding
chr9	4711155	4741318	4711155	4741318	-	ENST00000381809.7@AK3	ENST00000381809.7	protein_coding	4740937,4722506,4719135,4718419,4711155	4741318,4722625,4719307,4718537,4713096	Gene ID= ENSG00000147853.16 TPM= 30.41 Transcript Type= protein_coding
chr9	4792896	4861064	4792896	4861064	+	transcript132.chr9.nnic@RCL1	transcript132.chr9.nnic	protein_coding	4792896,4799159,4823548,4826858,4833154,4834141,4841232,4844525,4849447,4860125	4793227,4799273,4823619,4827033,4833228,4834265,4841357,4844681,4849550,4861064	Gene ID= ENSG00000120158.11 TPM= 4.34 Transcript Type= NA
chr9	4792869	4861064	4792869	4861064	+	ENST00000381750.8@RCL1	ENST00000381750.8	protein_coding	4792869,4823548,4826858,4833154,4834141,4841232,4844525,4849447,4860125	4793227,4823619,4827033,4833228,4834265,4841357,4844681,4849550,4861064	Gene ID= ENSG00000120158.11 TPM= 12.07 Transcript Type= protein_coding
chr9	4803017	4804779	4803017	4804779	-	transcript146.chr9.nnic@NA	transcript146.chr9.nnic	NA	4803017	4804779	Gene ID= novel_gene_chr9_147 TPM= 9.65 Transcript Type= NA
chr9	4985288	5078593	4985288	5078593	+	transcript129.chr9.nic@JAK2	transcript129.chr9.nic	protein_coding	4985288,4985940,5021963,5029783,5044403,5050686,5054563,5055669,5064883,5066678,5069022,5069925,5072492,5073698,5077453,5078306	4985630,4986022,5022213,5029906,5044520,5050831,5054884,5055788,5065040,5066789,5069208,5070052,5072626,5073785,5077580,5078593	Gene ID= ENSG00000096968.13 TPM= 1.93 Transcript Type= NA
chr9	5357973	5437878	5357973	5437878	-	ENST00000223864.6@PLGRKT	ENST00000223864.6	protein_coding	5437789,5436569,5431897,5361758,5361078,5357973	5437878,5436694,5431983,5361888,5361187,5358360	Gene ID= ENSG00000107020.9 TPM= 20.27 Transcript Type= protein_coding
chr9	5629098	5721398	5629098	5721398	+	transcript163.chr9.nic@RIC1	transcript163.chr9.nic	protein_coding	5629098,5656583,5689959,5713896,5720182,5720614	5629453,5656690,5690038,5714003,5720324,5721398	Gene ID= ENSG00000107036.11 TPM= 1.93 Transcript Type= NA
chr9	5629119	5776557	5629119	5776557	+	ENST00000414202.6@RIC1	ENST00000414202.6	protein_coding	5629119,5656583,5689959,5713896,5720182,5720614,5732388,5738450,5742869,5743689,5745931,5747302,5753200,5753536,5754841,5756212,5757313,5762541,5763140,5765414,5765662,5768970,5770087,5772564,5772892,5773958	5629453,5656690,5690038,5714003,5720324,5720750,5732479,5738538,5743013,5743737,5746083,5747505,5753238,5753646,5754930,5756372,5757451,5762660,5763868,5765572,5765798,5769256,5770278,5772741,5773080,5776557	Gene ID= ENSG00000107036.11 TPM= 4.83 Transcript Type= protein_coding
chr9	5784573	5833117	5784573	5833117	-	ENST00000339450.9@ERMP1	ENST00000339450.9	protein_coding	5832690,5830727,5825092,5823896,5812889,5812125,5811111,5810011,5805611,5805027,5801176,5798806,5797817,5787430,5784573	5833117,5831028,5825219,5824001,5813035,5812217,5811323,5810231,5805785,5805217,5801328,5799008,5797932,5787593,5787308	Gene ID= ENSG00000099219.13 TPM= 8.69 Transcript Type= protein_coding
chr9	5968162	6008490	5968162	6008490	-	transcript177.chr9.nic@KIAA2026	transcript177.chr9.nic	protein_coding	6007195,5988345,5968162	6008490,5988545,5969436	Gene ID= ENSG00000183354.11 TPM= 11.1 Transcript Type= NA
chr9	5968177	6007901	5968177	6007901	-	ENST00000513355.2@KIAA2026	ENST00000513355.2	protein_coding	6007195,5968177	6007901,5969436	Gene ID= ENSG00000183354.11 TPM= 1.45 Transcript Type= protein_coding
chr9	6011043	6015618	6011043	6015618	-	ENST00000259569.5@RANBP6	ENST00000259569.5	protein_coding	6011043	6015618	Gene ID= ENSG00000137040.9 TPM= 36.68 Transcript Type= protein_coding
chr9	6757455	7015257	6757455	7015257	+	transcript196.chr9.nic@KDM4C	transcript196.chr9.nic	protein_coding	6757455,6792972,6805599,6814631,6849507,6880012,6887960,6893095,6980925,6984166,6986344,6990416,7011698,7013788	6758203,6793132,6805774,6814745,6849700,6880061,6888063,6893232,6981118,6984404,6986666,6990524,7011879,7015257	Gene ID= ENSG00000107077.18 TPM= 2.9 Transcript Type= NA
chr9	7796490	7800067	7796490	7800067	-	ENST00000358227.4@DMAC1	ENST00000358227.4	protein_coding	7799461,7796490	7800067,7798637	Gene ID= ENSG00000137038.7 TPM= 16.41 Transcript Type= protein_coding
chr9	7798344	7799802	7798344	7799802	-	transcript205.chr9.nnic@DMAC1	transcript205.chr9.nnic	protein_coding	7799547,7798344	7799802,7798637	Gene ID= ENSG00000137038.7 TPM= 14.48 Transcript Type= NA
chr9	14314793	14316083	14314793	14316083	-	transcript228.chr9.nnic@NA	transcript228.chr9.nnic	NA	14314793	14316083	Gene ID= novel_gene_chr9_229 TPM= 4.83 Transcript Type= NA
chr9	15422869	15462460	15422869	15462460	+	ENST00000490969.5@SNAPC3	ENST00000490969.5	protein_coding	15422869,15423909,15433552,15444602,15447095,15451320,15453041,15457960,15459719,15461631	15423193,15423986,15433636,15444706,15447244,15451402,15453205,15458067,15460313,15462460	Gene ID= ENSG00000164975.15 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr9	15464066	15511019	15464066	15511019	-	ENST00000380733.8@PSIP1	ENST00000380733.8	protein_coding	15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15469938,15469266,15468957,15468630,15466748,15464066	15511019,15510329,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15469993,15469336,15469058,15468843,15466859,15465580	Gene ID= ENSG00000164985.14 TPM= 9.17 Transcript Type= protein_coding
chr9	15464066	15510995	15464066	15510995	-	ENST00000380738.8@PSIP1	ENST00000380738.8	protein_coding	15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15469938,15469266,15468957,15468630,15466748,15464066	15510995,15510326,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15469993,15469336,15469058,15468843,15466859,15465580	Gene ID= ENSG00000164985.14 TPM= 4.34 Transcript Type= protein_coding
chr9	16579791	16870985	16579791	16870985	-	transcript271.chr9.nic@BNC2	transcript271.chr9.nic	protein_coding	16870646,16738360,16727797,16582983,16579791	16870985,16738485,16727997,16583085,16580148	Gene ID= ENSG00000173068.17 TPM= 1.93 Transcript Type= NA
chr9	16726479	16870900	16726479	16870900	-	transcript273.chr9.nic@BNC2	transcript273.chr9.nic	protein_coding	16870646,16738360,16726479	16870900,16738485,16727997	Gene ID= ENSG00000173068.17 TPM= 1.93 Transcript Type= NA
chr9	17299886	17301445	17299886	17301445	+	transcript275.chr9.nnic@NA	transcript275.chr9.nnic	NA	17299886	17301445	Gene ID= novel_gene_chr9_276 TPM= 1.93 Transcript Type= NA
chr9	19049395	19050983	19049395	19050983	+	ENST00000380527.2@RRAGA	ENST00000380527.2	protein_coding	19049395	19050983	Gene ID= ENSG00000155876.5 TPM= 207.54 Transcript Type= protein_coding
chr9	19053143	19103119	19053143	19103119	-	ENST00000380502.7@HAUS6	ENST00000380502.7	protein_coding	19102524,19096674,19094317,19093171,19089412,19087091,19086734,19082873,19080479,19078176,19076602,19070219,19063514,19063008,19060088,19057961,19053143	19103119,19096769,19094395,19093303,19089559,19087156,19086782,19083043,19080672,19078302,19076704,19070300,19063580,19063193,19060223,19059001,19056404	Gene ID= ENSG00000147874.10 TPM= 1.93 Transcript Type= protein_coding
chr9	19108375	19127553	19108375	19127553	-	transcript287.chr9.nic@PLIN2	transcript287.chr9.nic	protein_coding	19127419,19126397,19126114,19123565,19120880,19119650,19118321,19116359,19108375	19127553,19126448,19126309,19123647,19121165,19119831,19118455,19116649,19108747	Gene ID= ENSG00000147872.9 TPM= 599.71 Transcript Type= NA
chr9	19115770	19127576	19115770	19127576	-	ENST00000276914.6@PLIN2	ENST00000276914.6	protein_coding	19127419,19126397,19126114,19123565,19120880,19119650,19118321,19115770	19127576,19126448,19126309,19123647,19121165,19119831,19118455,19116649	Gene ID= ENSG00000147872.9 TPM= 1977.88 Transcript Type= protein_coding
chr9	19123235	19127476	19123235	19127476	-	ENST00000380465.7@PLIN2	ENST00000380465.7	protein_coding	19127419,19126397,19126114,19123565,19123235	19127476,19126448,19126309,19123647,19123476	Gene ID= ENSG00000147872.9 TPM= 5.79 Transcript Type= protein_coding
chr9	19123313	19127490	19123313	19127490	-	ENST00000380464.7@PLIN2	ENST00000380464.7	protein_coding	19127419,19126397,19126114,19123313	19127490,19126448,19126309,19123647	Gene ID= ENSG00000147872.9 TPM= 10.75 Transcript Type= protein_coding
chr9	19375715	19380254	19375715	19380254	-	ENST00000380394.8@RPS6	ENST00000380394.8	protein_coding	19380190,19379487,19378708,19378368,19376494,19375715	19380254,19379618,19378918,19378514,19376651,19376388	Gene ID= ENSG00000137154.12 TPM= 1.13 Transcript Type= protein_coding
chr9	19376285	19380198	19376285	19380198	-	ENST00000315377.4@RPS6	ENST00000315377.4	protein_coding	19380088,19379487,19378708,19378368,19376494,19376285	19380198,19379618,19378918,19378514,19376651,19376388	Gene ID= ENSG00000137154.12 TPM= 4.03 Transcript Type= protein_coding
chr9	20341665	20622543	20341665	20622543	-	ENST00000380338.8@MLLT3	ENST00000380338.8	protein_coding	20622245,20620654,20456704,20448123,20413721,20365669,20363476,20360742,20354808,20353525,20341665	20622543,20620834,20456786,20448266,20414425,20365744,20363605,20360841,20354879,20353596,20346574	Gene ID= ENSG00000171843.15 TPM= 1.93 Transcript Type= protein_coding
chr9	20715321	20995955	20715321	20995955	+	ENST00000338382.10@FOCAD	ENST00000338382.10	protein_coding	20715321,20717794,20720380,20740236,20758090,20764869,20770032,20778681,20781727,20789351,20819796,20820324,20820941,20822989,20862578,20865926,20866929,20874681,20881871,20885109,20907150,20912866,20916893,20923660,20926301,20929358,20933014,20944627,20946701,20948271,20948851,20949604,20950996,20952985,20976420,20978339,20981426,20982357,20986288,20988332,20990123,20993253,20995556	20715410,20717868,20720534,20740340,20758191,20765073,20770238,20778768,20781929,20789608,20819900,20820425,20821071,20823115,20862712,20865976,20867012,20874807,20882056,20885230,20907242,20912954,20916937,20923768,20926417,20929596,20933103,20944774,20946820,20948393,20948928,20949675,20951098,20953065,20976548,20978454,20981686,20982446,20986465,20988429,20990374,20993328,20995955	Gene ID= ENSG00000188352.12 TPM= 28.96 Transcript Type= protein_coding
chr9	21332010	21335409	21332010	21335409	-	transcript428.chr9.nnic@NA	transcript428.chr9.nnic	NA	21332010	21335409	Gene ID= novel_gene_chr9_429 TPM= 11.58 Transcript Type= NA
chr9	22002903	22009363	22002903	22009363	-	ENST00000276925.6@CDKN2B	ENST00000276925.6	protein_coding	22008798,22002903	22009363,22006247	Gene ID= ENSG00000147883.10 TPM= 3.86 Transcript Type= protein_coding
chr9	22446841	22455740	22446841	22455740	+	ENST00000325870.2@DMRTA1	ENST00000325870.2	protein_coding	22446841,22451064	22447732,22455740	Gene ID= ENSG00000176399.3 TPM= 1.93 Transcript Type= protein_coding
chr9	25677645	25680092	25677645	25680092	+	transcript441.chr9.nnic@NA	transcript441.chr9.nnic	NA	25677645	25680092	Gene ID= novel_gene_chr9_442 TPM= 1.93 Transcript Type= NA
chr9	25677675	25678856	25677675	25678856	+	transcript439.chr9.nnic@NA	transcript439.chr9.nnic	NA	25677675	25678856	Gene ID= novel_gene_chr9_440 TPM= 4.83 Transcript Type= NA
chr9	26891447	26892778	26891447	26892778	-	transcript451.chr9.nnic@NA	transcript451.chr9.nnic	NA	26891447	26892778	Gene ID= novel_gene_chr9_452 TPM= 1.93 Transcript Type= NA
chr9	26907803	26947233	26907803	26947233	-	ENST00000520884.5@PLAA	ENST00000520884.5	protein_coding	26946897,26935013,26928308,26928100,26926393,26925825,26923178,26920227,26919310,26917097,26913879,26910338,26907803	26947233,26935206,26928408,26928220,26926560,26925960,26923347,26920384,26919529,26917165,26913947,26910439,26907998	Gene ID= ENSG00000137055.14 TPM= 24.13 Transcript Type= protein_coding
chr9	26956373	27062930	26956373	27062930	+	ENST00000380062.9@IFT74	ENST00000380062.9	protein_coding	26956373,26961949,26978128,26980571,26984257,26984499,26988669,26990134,27009020,27011906,27016907,27018647,27029025,27044742,27047274,27048148,27055609,27056334,27060591,27062618	26956516,26962087,26978263,26980619,26984355,26984559,26988728,26990195,27009158,27011968,27017050,27018687,27029104,27044795,27047371,27048274,27055772,27056459,27060651,27062930	Gene ID= ENSG00000096872.15 TPM= 6.76 Transcript Type= protein_coding
chr9	27109149	27230175	27109149	27230175	+	ENST00000380036.8@TEK	ENST00000380036.8	protein_coding	27109149,27157831,27168495,27169477,27172616,27173222,27180240,27183459,27185485,27190529,27192489,27197315,27202820,27204911,27206582,27209121,27212707,27213484,27217688,27218777,27220049,27228206,27229158	27109642,27158142,27168605,27169629,27172747,27173362,27180368,27183610,27185629,27190690,27192623,27197599,27203119,27205065,27206792,27209231,27212897,27213597,27217758,27218817,27220145,27228305,27230175	Gene ID= ENSG00000120156.20 TPM= 4.83 Transcript Type= protein_coding
chr9	27325209	27529781	27325209	27529781	-	ENST00000262244.5@MOB3B	ENST00000262244.5	protein_coding	27529555,27455133,27359034,27325209	27529781,27455748,27359236,27330616	Gene ID= ENSG00000120162.9 TPM= 4.83 Transcript Type= protein_coding
chr9	27546546	27573465	27546546	27573465	-	transcript490.chr9.nnic@C9orf72	transcript490.chr9.nnic	protein_coding	27573431,27566677,27566485,27565531,27562381,27561585,27560227,27558491,27556561,27550650,27548557,27546546	27573465,27567164,27566535,27565590,27562476,27561649,27560299,27558607,27556796,27550707,27548666,27548422	Gene ID= ENSG00000147894.14 TPM= 1.93 Transcript Type= NA
chr9	27546545	27573866	27546545	27573866	-	ENST00000619707.4@C9orf72	ENST00000619707.4	protein_coding	27573709,27566677,27565531,27562381,27561585,27560227,27558491,27556561,27550650,27548557,27546545	27573866,27567164,27565590,27562476,27561649,27560299,27558607,27556796,27550707,27548666,27548422	Gene ID= ENSG00000147894.14 TPM= 5.79 Transcript Type= protein_coding
chr9	27560426	27573461	27560426	27573461	-	transcript495.chr9.nic@C9orf72	transcript495.chr9.nic	protein_coding	27573431,27566677,27565531,27562381,27560426	27573461,27567164,27565590,27562476,27561649	Gene ID= ENSG00000147894.14 TPM= 1.93 Transcript Type= NA
chr9	27546546	27573450	27546546	27573450	-	ENST00000380003.7@C9orf72	ENST00000380003.7	protein_coding	27573431,27566677,27565531,27562381,27561585,27560227,27558491,27556561,27550650,27548557,27546546	27573450,27567164,27565590,27562476,27561649,27560299,27558607,27556796,27550707,27548666,27548422	Gene ID= ENSG00000147894.14 TPM= 27.99 Transcript Type= protein_coding
chr9	32384603	32450832	32384603	32450832	+	ENST00000541043.5@ACO1	ENST00000541043.5	protein_coding	32384603,32386371,32405485,32407261,32408514,32418128,32418328,32419038,32420856,32423319,32424549,32425838,32427301,32429419,32430418,32431719,32433728,32434559,32436250,32440465,32448896,32449998	32384735,32386442,32405603,32407429,32408651,32418197,32418511,32419177,32421027,32423419,32424665,32425997,32427436,32429503,32430574,32431843,32433832,32434701,32436397,32440587,32449081,32450832	Gene ID= ENSG00000122729.18 TPM= 3.38 Transcript Type= protein_coding
chr9	32384620	32454769	32384620	32454769	+	ENST00000309951.7@ACO1	ENST00000309951.7	protein_coding	32384620,32405485,32407261,32408514,32418128,32418328,32419038,32420856,32423319,32424549,32425838,32427301,32429419,32430418,32431719,32433728,32434559,32436250,32440465,32448896,32449998	32384735,32405603,32407429,32408651,32418197,32418511,32419177,32421027,32423419,32424665,32425997,32427436,32429503,32430574,32431843,32433832,32434701,32436397,32440587,32449081,32454769	Gene ID= ENSG00000122729.18 TPM= 1.93 Transcript Type= protein_coding
chr9	32384620	32450836	32384620	32450836	+	ENST00000379923.5@ACO1	ENST00000379923.5	protein_coding	32384620,32386371,32405485,32407261,32408514,32418128,32418328,32419038,32420856,32423319,32424549,32425838,32427301,32429419,32430418,32431719,32433728,32434559,32436250,32440465,32448896,32449998	32384735,32386438,32405603,32407429,32408651,32418197,32418511,32419177,32421027,32423419,32424665,32425997,32427436,32429503,32430574,32431843,32433832,32434701,32436397,32440587,32449081,32450836	Gene ID= ENSG00000122729.18 TPM= 13.03 Transcript Type= protein_coding
chr9	32455705	32526324	32455705	32526324	-	ENST00000379883.2@DDX58	ENST00000379883.2	protein_coding	32526061,32500805,32493761,32492391,32491301,32489344,32488734,32487945,32487471,32485175,32481340,32480219,32476983,32472975,32467762,32466290,32459371,32455705	32526324,32500939,32493942,32492538,32491420,32489451,32488887,32488203,32487633,32485279,32481497,32480354,32477131,32473065,32467932,32466441,32459514,32457418	Gene ID= ENSG00000107201.9 TPM= 1.93 Transcript Type= protein_coding
chr9	32551144	32553007	32551144	32553007	+	ENST00000453396.5@SMIM27	ENST00000453396.5	protein_coding	32551144,32552234,32552801	32551693,32552479,32553007	Gene ID= ENSG00000235453.9 TPM= 9.65 Transcript Type= protein_coding
chr9	32552999	32573162	32552999	32573162	-	ENST00000379847.7@NDUFB6	ENST00000379847.7	protein_coding	32572881,32570960,32558910,32552999	32573162,32571052,32558954,32553944	Gene ID= ENSG00000165264.10 TPM= 3.86 Transcript Type= protein_coding
chr9	32553651	32573159	32553651	32573159	-	ENST00000350021.2@NDUFB6	ENST00000350021.2	protein_coding	32572881,32570960,32553651	32573159,32571052,32553944	Gene ID= ENSG00000165264.10 TPM= 2.9 Transcript Type= protein_coding
chr9	32972616	33001641	32972616	33001641	-	transcript536.chr9.nic@APTX	transcript536.chr9.nic	protein_coding	33001567,32989759,32988079,32987544,32985971,32984631,32974458,32972616	33001641,32989895,32988124,32987842,32986030,32984857,32974561,32973652	Gene ID= ENSG00000137074.18 TPM= 5.47 Transcript Type= NA
chr9	32972616	33001587	32972616	33001587	-	transcript537.chr9.nic@APTX	transcript537.chr9.nic	protein_coding	33001516,32989759,32988079,32987544,32985971,32984631,32974458,32972616	33001587,32989895,32988129,32987842,32986030,32984857,32974561,32973652	Gene ID= ENSG00000137074.18 TPM= 2.58 Transcript Type= NA
chr9	32972607	33001612	32972607	33001612	-	ENST00000309615.7@APTX	ENST00000309615.7	protein_coding	33001516,32989759,32987544,32985971,32984631,32974458,32972607	33001612,32989895,32987731,32986030,32984857,32974561,32973652	Gene ID= ENSG00000137074.18 TPM= 1.61 Transcript Type= protein_coding
chr9	32972749	33001604	32972749	33001604	-	ENST00000379819.5@APTX	ENST00000379819.5	protein_coding	33001567,32989759,32988079,32987544,32985971,32984631,32974458,32972749	33001604,32989895,32988129,32987842,32986030,32984857,32974561,32973652	Gene ID= ENSG00000137074.18 TPM= 3.86 Transcript Type= protein_coding
chr9	33023223	33025120	33023223	33025120	-	transcript547.chr9.nnic@NA	transcript547.chr9.nnic	NA	33023223	33025120	Gene ID= novel_gene_chr9_548 TPM= 1.93 Transcript Type= NA
chr9	33025211	33039907	33025211	33039907	+	ENST00000330899.4@DNAJA1	ENST00000330899.4	protein_coding	33025211,33026475,33026813,33029885,33030440,33034216,33036574,33037015,33038685	33025383,33026616,33026990,33029989,33030667,33034330,33036689,33037115,33039907	Gene ID= ENSG00000086061.15 TPM= 177.62 Transcript Type= protein_coding
chr9	33054177	33076663	33054177	33076663	-	transcript573.chr9.nic@SMU1	transcript573.chr9.nic	protein_coding	33076583,33073596,33071740,33068824,33062049,33060465,33057598,33056837,33054177	33076663,33073806,33071892,33068934,33062177,33060584,33057714,33056964,33056239	Gene ID= ENSG00000122692.8 TPM= 2.9 Transcript Type= NA
chr9	33041764	33076659	33041764	33076659	-	ENST00000397149.3@SMU1	ENST00000397149.3	protein_coding	33076583,33073596,33071740,33068824,33062049,33060465,33057598,33056837,33056113,33053123,33048106,33041764	33076659,33073806,33071892,33068934,33062177,33060584,33057714,33056964,33056239,33053290,33048258,33047391	Gene ID= ENSG00000122692.8 TPM= 26.06 Transcript Type= protein_coding
chr9	33110637	33166797	33110637	33166797	-	transcript577.chr9.nnic@B4GALT1	transcript577.chr9.nnic	protein_coding	33166758,33135189,33128036,33120419,33115991,33113774,33110637	33166797,33135424,33128197,33120606,33116113,33113878,33113586	Gene ID= ENSG00000086062.12 TPM= 7.4 Transcript Type= NA
chr9	33110637	33167356	33110637	33167356	-	ENST00000379731.4@B4GALT1	ENST00000379731.4	protein_coding	33166758,33135189,33120419,33115991,33113774,33110637	33167356,33135424,33120606,33116113,33113878,33113586	Gene ID= ENSG00000086062.12 TPM= 10.3 Transcript Type= protein_coding
chr9	33110637	33167355	33110637	33167355	-	transcript581.chr9.nnic@B4GALT1	transcript581.chr9.nnic	protein_coding	33166758,33135189,33120419,33113774,33110637	33167355,33135424,33120606,33113878,33113586	Gene ID= ENSG00000086062.12 TPM= 7.4 Transcript Type= NA
chr9	33255049	33264720	33255049	33264720	-	ENST00000379707.7@BAG1	ENST00000379707.7	protein_coding	33264224,33262702,33262105,33261087,33258920,33256801,33255865,33255049	33264720,33262830,33262246,33261169,33259033,33256908,33255927,33255308	Gene ID= ENSG00000107262.19 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr9	33265000	33281539	33265000	33281539	+	transcript591.chr9.nnic@CHMP5	transcript591.chr9.nnic	protein_coding	33265000,33266010,33267853,33270623,33271152,33273488,33276456,33278113,33280809	33265147,33266114,33267899,33270716,33271223,33273532,33276564,33278225,33281539	Gene ID= ENSG00000086065.13 TPM= 2.41 Transcript Type= NA
chr9	33264942	33281539	33264942	33281539	+	ENST00000223500.8@CHMP5	ENST00000223500.8	protein_coding	33264942,33266010,33267853,33270623,33271152,33276456,33278113,33280809	33265147,33266114,33267899,33270716,33271223,33276564,33278225,33281539	Gene ID= ENSG00000086065.13 TPM= 62.26 Transcript Type= protein_coding
chr9	33290512	33348517	33290512	33348517	+	transcript607.chr9.nnic@NFX1	transcript607.chr9.nnic	protein_coding	33290512,33301263,33303191,33307194,33311106,33313654,33318731,33318910,33328581,33332472,33338510,33342746,33344069,33347038,33347663	33290597,33301421,33303268,33307299,33311177,33313793,33318830,33319127,33328678,33332502,33338589,33342854,33344188,33347117,33348517	Gene ID= ENSG00000086102.18 TPM= 5.79 Transcript Type= NA
chr9	33290545	33348723	33290545	33348723	+	ENST00000318524.6@NFX1	ENST00000318524.6	protein_coding	33290545,33294420,33301263,33303191,33307194,33311106,33313654,33318731,33318910,33328581,33332472,33338510,33342746,33344069,33347038,33347663	33290597,33295427,33301421,33303268,33307299,33311177,33313793,33318830,33319127,33328678,33332502,33338589,33342854,33344188,33347117,33348723	Gene ID= ENSG00000086102.18 TPM= 13.51 Transcript Type= protein_coding
chr9	33290511	33371157	33290511	33371157	+	ENST00000379540.7@NFX1	ENST00000379540.7	protein_coding	33290511,33294420,33301263,33303191,33307194,33311106,33313654,33318731,33318910,33328581,33332472,33338510,33342746,33344069,33347038,33351560,33352646,33354086,33354851,33364010,33364708,33366629,33367515,33369906	33290597,33295427,33301421,33303268,33307299,33311177,33313793,33318830,33319127,33328678,33332502,33338589,33342854,33344188,33347117,33351790,33352719,33354187,33354892,33364108,33364774,33366774,33367619,33371157	Gene ID= ENSG00000086102.18 TPM= 7.72 Transcript Type= protein_coding
chr9	33365146	33365615	33365146	33365615	+	transcript611.chr9.nnic@NA	transcript611.chr9.nnic	NA	33365146	33365615	Gene ID= novel_gene_chr9_612 TPM= 1.93 Transcript Type= NA
chr9	33384950	33402591	33384950	33402591	-	transcript613.chr9.nic@AQP7	transcript613.chr9.nic	protein_coding	33402373,33401237,33395078,33386969,33386404,33386077,33385649,33384950	33402591,33401287,33395195,33387092,33386541,33386195,33385866,33385231	Gene ID= ENSG00000165269.12 TPM= 2.9 Transcript Type= NA
chr9	33384950	33402519	33384950	33402519	-	ENST00000297988.5@AQP7	ENST00000297988.5	protein_coding	33402373,33401237,33395078,33386969,33386404,33386077,33385649,33384950	33402519,33401287,33395195,33387092,33386541,33386195,33385866,33385290	Gene ID= ENSG00000165269.12 TPM= 3.86 Transcript Type= protein_coding
chr9	33441154	33447611	33441154	33447611	-	ENST00000297991.4@AQP3	ENST00000297991.4	protein_coding	33447423,33443766,33443321,33442852,33442301,33441154	33447611,33443892,33443458,33442970,33442518,33442211	Gene ID= ENSG00000165272.14 TPM= 3.86 Transcript Type= protein_coding
chr9	33461452	33473930	33461452	33473930	-	ENST00000297990.8@NOL6	ENST00000297990.8	protein_coding	33473789,33472206,33472004,33470012,33469499,33469207,33468958,33468752,33468508,33468321,33468030,33467691,33467394,33467114,33466912,33466569,33466308,33466071,33465734,33465207,33464879,33464037,33463831,33463247,33463033,33461452	33473930,33472412,33472120,33470191,33469667,33469341,33469121,33468872,33468566,33468422,33468145,33467868,33467516,33467262,33466987,33466709,33466425,33466225,33465897,33465359,33464976,33464161,33463920,33463441,33463134,33462813	Gene ID= ENSG00000165271.16 TPM= 66.61 Transcript Type= protein_coding
chr9	33677249	33681109	33677249	33681109	+	transcript630.chr9.nic@PTENP1-AS	transcript630.chr9.nic	antisense_RNA	33677249,33678090	33677509,33681109	Gene ID= ENSG00000281128.1 TPM= 2.9 Transcript Type= NA
chr9	33817160	33917987	33817160	33917987	+	transcript641.chr9.nnic@UBE2R2	transcript641.chr9.nnic	protein_coding	33817160,33886881,33900174,33917018	33817934,33886967,33900271,33917987	Gene ID= ENSG00000107341.4 TPM= 15.44 Transcript Type= NA
chr9	33817567	33920404	33817567	33920404	+	ENST00000263228.3@UBE2R2	ENST00000263228.3	protein_coding	33817567,33886881,33900174,33911964,33917018	33817934,33886967,33900271,33912098,33920404	Gene ID= ENSG00000107341.4 TPM= 7.72 Transcript Type= protein_coding
chr9	33921693	34048901	33921693	34048901	-	ENST00000379238.5@UBAP2	ENST00000379238.5	protein_coding	34048825,34017050,33998787,33996223,33988973,33986760,33973183,33971651,33963726,33960826,33956079,33953285,33948374,33944365,33943420,33941649,33935839,33933490,33932562,33927797,33926989,33926617,33924206,33923795,33923379,33923186,33922966,33922687,33921693	34048901,34017189,33998864,33996333,33989126,33986837,33973237,33971754,33963791,33960878,33956146,33953474,33948587,33944639,33943589,33941862,33935878,33933628,33932628,33927992,33927080,33926664,33924284,33924000,33923478,33923293,33923033,33922878,33922599	Gene ID= ENSG00000137073.21 TPM= 39.58 Transcript Type= protein_coding
chr9	34086387	34126773	34086387	34126773	-	ENST00000361264.8@DCAF12	ENST00000361264.8	protein_coding	34126354,34125023,34107359,34106434,34098324,34096716,34093286,34089412,34086387	34126773,34125277,34107565,34106494,34098517,34096781,34093448,34089590,34088508	Gene ID= ENSG00000198876.12 TPM= 36.68 Transcript Type= protein_coding
chr9	34179013	34252523	34179013	34252523	+	ENST00000297661.8@UBAP1	ENST00000297661.8	protein_coding	34179013,34220908,34234216,34241185,34249779,34250658,34251392	34179240,34220948,34234340,34242108,34249961,34250759,34252523	Gene ID= ENSG00000165006.13 TPM= 102.32 Transcript Type= protein_coding
chr9	34181118	34181588	34181118	34181588	-	transcript673.chr9.nnic@NA	transcript673.chr9.nnic	NA	34181118	34181588	Gene ID= novel_gene_chr9_674 TPM= 1.93 Transcript Type= NA
chr9	34329506	34343713	34329506	34343713	+	ENST00000379158.6@NUDT2	ENST00000379158.6	protein_coding	34329506,34336229,34338713,34339024,34343124	34329599,34336341,34338847,34339166,34343713	Gene ID= ENSG00000164978.17 TPM= 3.21 Transcript Type= protein_coding
chr9	34329506	34343711	34329506	34343711	+	ENST00000618590.1@NUDT2	ENST00000618590.1	protein_coding	34329506,34339024,34343124	34329599,34339166,34343711	Gene ID= ENSG00000164978.17 TPM= 1.28 Transcript Type= protein_coding
chr9	34329506	34343711	34329506	34343711	+	ENST00000346365.8@NUDT2	ENST00000346365.8	protein_coding	34329506,34338713,34339024,34343124	34329599,34338847,34339166,34343711	Gene ID= ENSG00000164978.17 TPM= 14.8 Transcript Type= protein_coding
chr9	34366670	34376853	34366670	34376853	-	ENST00000297625.7@KIAA1161	ENST00000297625.7	protein_coding	34376793,34366670	34376853,34373006	Gene ID= ENSG00000164976.8 TPM= 45.37 Transcript Type= protein_coding
chr9	34372910	34374915	34372910	34374915	+	transcript682.chr9.nnic@NA	transcript682.chr9.nnic	NA	34372910	34374915	Gene ID= novel_gene_chr9_683 TPM= 1.93 Transcript Type= NA
chr9	34398190	34458564	34398190	34458564	-	transcript684.chr9.nnic@FAM219A	transcript684.chr9.nnic	protein_coding	34458204,34421521,34405916,34402705,34402387,34401666,34398190	34458564,34421593,34405964,34402807,34402467,34401720,34401122	Gene ID= ENSG00000164970.14 TPM= 36.52 Transcript Type= NA
chr9	34398184	34458552	34398184	34458552	-	ENST00000379081.5@FAM219A	ENST00000379081.5	protein_coding	34458237,34405916,34402705,34402387,34401666,34398184	34458552,34405964,34402807,34402467,34401720,34401122	Gene ID= ENSG00000164970.14 TPM= 37 Transcript Type= protein_coding
chr9	34398190	34458570	34398190	34458570	-	ENST00000297620.8@FAM219A	ENST00000297620.8	protein_coding	34458204,34405916,34402705,34402387,34401666,34398190	34458570,34405964,34402807,34402467,34401720,34401122	Gene ID= ENSG00000164970.14 TPM= 53.89 Transcript Type= protein_coding
chr9	34551432	34589756	34551432	34589756	-	transcript696.chr9.nnic@CNTFR	transcript696.chr9.nnic	protein_coding	34589555,34581095,34574685,34573809,34568897,34564599,34557867,34557526,34556255,34552674,34552161,34551432	34589756,34581205,34574719,34573844,34568981,34564832,34557984,34557692,34556418,34552854,34552329,34552071	Gene ID= ENSG00000122756.14 TPM= 10.09 Transcript Type= NA
chr9	34551432	34589756	34551432	34589756	-	transcript700.chr9.nnic@CNTFR	transcript700.chr9.nnic	protein_coding	34589555,34581095,34573709,34568897,34564599,34557867,34557526,34556255,34552674,34552161,34551432	34589756,34581205,34573844,34568981,34564832,34557984,34557692,34556418,34552854,34552329,34552071	Gene ID= ENSG00000122756.14 TPM= 11.05 Transcript Type= NA
chr9	34563664	34589756	34563664	34589756	-	transcript717.chr9.nic@CNTFR	transcript717.chr9.nic	protein_coding	34589555,34581095,34568897,34563664	34589756,34581205,34568981,34564832	Gene ID= ENSG00000122756.14 TPM= 2.12 Transcript Type= NA
chr9	34551432	34589737	34551432	34589737	-	ENST00000378980.7@CNTFR	ENST00000378980.7	protein_coding	34589555,34581095,34568897,34564599,34557867,34557526,34556255,34552674,34552161,34551432	34589737,34581205,34568981,34564832,34557984,34557692,34556418,34552854,34552329,34552071	Gene ID= ENSG00000122756.14 TPM= 26.5 Transcript Type= protein_coding
chr9	34551432	34589706	34551432	34589706	-	ENST00000351266.8@CNTFR	ENST00000351266.8	protein_coding	34589555,34568897,34564599,34557867,34557526,34556255,34552674,34552161,34551432	34589706,34568981,34564832,34557984,34557692,34556418,34552854,34552329,34552071	Gene ID= ENSG00000122756.14 TPM= 11.05 Transcript Type= protein_coding
chr9	34610486	34612104	34610486	34612104	-	ENST00000297613.4@RPP25L	ENST00000297613.4	protein_coding	34611860,34610486	34612104,34611332	Gene ID= ENSG00000164967.9 TPM= 45.85 Transcript Type= protein_coding
chr9	34610486	34612104	34610486	34612104	-	ENST00000378959.8@RPP25L	ENST00000378959.8	protein_coding	34612064,34610486	34612104,34611332	Gene ID= ENSG00000164967.9 TPM= 80.6 Transcript Type= protein_coding
chr9	34613551	34620509	34613551	34620509	-	transcript722.chr9.nnic@DCTN3	transcript722.chr9.nnic	protein_coding	34620369,34618676,34617885,34616030,34615281,34614710,34614042,34613551	34620509,34618760,34617971,34616113,34615442,34614768,34614101,34613871	Gene ID= ENSG00000137100.15 TPM= 2.41 Transcript Type= NA
chr9	34613545	34620523	34613545	34620523	-	ENST00000378916.8@DCTN3	ENST00000378916.8	protein_coding	34620369,34618676,34617885,34614710,34614042,34613545	34620523,34618760,34617971,34614768,34614101,34613871	Gene ID= ENSG00000137100.15 TPM= 1.45 Transcript Type= protein_coding
chr9	34613551	34620480	34613551	34620480	-	ENST00000259632.11@DCTN3	ENST00000259632.11	protein_coding	34620369,34618676,34617885,34616030,34614710,34614042,34613551	34620480,34618760,34617971,34616113,34614768,34614101,34613871	Gene ID= ENSG00000137100.15 TPM= 71.92 Transcript Type= protein_coding
chr9	34613551	34620474	34613551	34620474	-	ENST00000341694.6@DCTN3	ENST00000341694.6	protein_coding	34620369,34618676,34617885,34616030,34614710,34614042,34613551	34620474,34618760,34617971,34616113,34614768,34614198,34613871	Gene ID= ENSG00000137100.15 TPM= 1.45 Transcript Type= protein_coding
chr9	34634722	34637771	34634722	34637771	-	ENST00000277010.8@SIGMAR1	ENST00000277010.8	protein_coding	34637547,34637220,34636997,34634722	34637771,34637420,34637089,34635858	Gene ID= ENSG00000147955.16 TPM= 28.96 Transcript Type= protein_coding
chr9	34652192	34661887	34652192	34661887	+	ENST00000441545.6@IL11RA	ENST00000441545.6	protein_coding	34652192,34655218,34655605,34656739,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482	34652233,34655317,34655665,34656908,34657149,34657335,34657587,34658683,34659900,34660393,34660600,34660936,34661887	Gene ID= ENSG00000137070.17 TPM= 5.79 Transcript Type= protein_coding
chr9	34665022	34665495	34665022	34665495	-	ENST00000555007.1@AL162231.1	ENST00000555007.1	protein_coding	34665314,34665022	34665495,34665190	Gene ID= ENSG00000187186.14 TPM= 1.28 Transcript Type= retained_intron
chr9	34665032	34666028	34665032	34666028	-	ENST00000544078.2@AL162231.1	ENST00000544078.2	protein_coding	34665978,34665613,34665314,34665032	34666028,34665680,34665373,34665190	Gene ID= ENSG00000187186.14 TPM= 12.87 Transcript Type= protein_coding
chr9	34665028	34666028	34665028	34666028	-	ENST00000416454.5@AL162231.1	ENST00000416454.5	protein_coding	34665978,34665613,34665028	34666028,34665680,34665373	Gene ID= ENSG00000187186.14 TPM= 2.25 Transcript Type= protein_coding
chr9	34709005	34710124	34709005	34710124	-	ENST00000259607.6@CCL21	ENST00000259607.6	protein_coding	34710000,34709777,34709500,34709005	34710124,34709897,34709682,34709427	Gene ID= ENSG00000137077.7 TPM= 1.93 Transcript Type= protein_coding
chr9	34989694	34998431	34989694	34998431	+	ENST00000312316.9@DNAJB5	ENST00000312316.9	protein_coding	34989694,34993200,34996265,34997026	34989831,34993444,34996866,34998431	Gene ID= ENSG00000137094.14 TPM= 34.27 Transcript Type= protein_coding
chr9	34992828	34998428	34992828	34998428	+	transcript757.chr9.nic@DNAJB5	transcript757.chr9.nic	protein_coding	34992828,34993200,34996265,34997026	34992986,34993444,34996866,34998428	Gene ID= ENSG00000137094.14 TPM= 23.65 Transcript Type= NA
chr9	34990222	34998428	34990222	34998428	+	ENST00000541010.5@DNAJB5	ENST00000541010.5	protein_coding	34990222,34996265,34997026	34993444,34996866,34998428	Gene ID= ENSG00000137094.14 TPM= 44.4 Transcript Type= retained_intron
chr9	34998239	35003661	34998239	35003661	+	transcript761.chr9.nnic@NA	transcript761.chr9.nnic	NA	34998239	35003661	Gene ID= novel_gene_chr9_762 TPM= 67.57 Transcript Type= NA
chr9	35056064	35073249	35056064	35073249	-	ENST00000358901.10@VCP	ENST00000358901.10	protein_coding	35072337,35068251,35067891,35066675,35065251,35064154,35062978,35062217,35062003,35061577,35061015,35060801,35060313,35059493,35059064,35057376,35056064	35073249,35068362,35068063,35066817,35065381,35064285,35063080,35062350,35062138,35061689,35061179,35060923,35060525,35059801,35059219,35057530,35057222	Gene ID= ENSG00000165280.15 TPM= 176.76 Transcript Type= protein_coding
chr9	35088691	35096632	35088691	35096632	-	transcript828.chr9.nic@PIGO	transcript828.chr9.nic	protein_coding	35096561,35095055,35094216,35093901,35093421,35093030,35091240,35090466,35090066,35089380,35088691	35096632,35095566,35094359,35094024,35093580,35093209,35092767,35090672,35090280,35089450,35089221	Gene ID= ENSG00000165282.13 TPM= 12.55 Transcript Type= NA
chr9	35088689	35096601	35088689	35096601	-	ENST00000361778.6@PIGO	ENST00000361778.6	protein_coding	35096561,35095055,35094216,35093901,35093421,35093030,35092543,35091240,35090466,35090066,35089380,35088689	35096601,35095566,35094359,35094024,35093580,35093209,35092767,35091291,35090672,35090280,35089450,35089221	Gene ID= ENSG00000165282.13 TPM= 36.68 Transcript Type= protein_coding
chr9	35099776	35103195	35099776	35103195	-	ENST00000452248.6@STOML2	ENST00000452248.6	protein_coding	35103050,35102686,35102095,35101904,35101710,35101135,35100932,35100598,35099776	35103195,35102823,35102194,35101962,35101811,35101279,35101011,35100726,35100172	Gene ID= ENSG00000165283.15 TPM= 1.93 Transcript Type= protein_coding
chr9	35099891	35103157	35099891	35103157	-	ENST00000356493.9@STOML2	ENST00000356493.9	protein_coding	35103050,35102686,35102095,35101904,35101710,35101426,35101135,35100932,35100598,35099891	35103157,35102823,35102194,35101962,35101811,35101560,35101279,35101011,35100726,35100172	Gene ID= ENSG00000165283.15 TPM= 253.88 Transcript Type= protein_coding
chr9	35390407	35405334	35390407	35405334	+	transcript845.chr9.nic@UNC13B	transcript845.chr9.nic	protein_coding	35390407,35396476,35396841,35397167,35397635,35398211,35398554,35398882,35399161,35399392,35399649,35400296,35403167,35403440,35403748	35390714,35396602,35396937,35397310,35397712,35398288,35398642,35399034,35399284,35399448,35399729,35400443,35403259,35403599,35405334	Gene ID= ENSG00000198722.14 TPM= 9.65 Transcript Type= NA
chr9	35605247	35610018	35605247	35610018	+	transcript853.chr9.nnic@TESK1	transcript853.chr9.nnic	protein_coding	35605247,35605474,35605984,35606237,35606837,35607327,35607582,35607928,35608160,35608395,35609107	35605425,35605838,35606105,35606285,35606983,35607409,35607672,35608011,35608249,35608509,35610018	Gene ID= ENSG00000107140.15 TPM= 7.72 Transcript Type= NA
chr9	35605299	35610018	35605299	35610018	+	transcript857.chr9.nnic@TESK1	transcript857.chr9.nnic	protein_coding	35605299,35605984,35606237,35606837,35607327,35607582,35607928,35608160,35608395,35609107	35605838,35606105,35606285,35606983,35607409,35607672,35608011,35608249,35608509,35610018	Gene ID= ENSG00000107140.15 TPM= 7.72 Transcript Type= NA
chr9	35605305	35610032	35605305	35610032	+	ENST00000620767.4@TESK1	ENST00000620767.4	protein_coding	35605305,35605474,35605984,35606237,35606837,35607327,35607582,35607928,35608160,35608395,35608862	35605425,35605838,35606105,35606285,35606983,35607409,35607672,35608011,35608249,35608509,35610032	Gene ID= ENSG00000107140.15 TPM= 89.77 Transcript Type= protein_coding
chr9	35658317	35661177	35658317	35661177	+	transcript864.chr9.nnic@CCDC107	transcript864.chr9.nnic	protein_coding	35658317,35658576,35660401,35660557,35660771,35660940	35658485,35658727,35660461,35660647,35660858,35661177	Gene ID= ENSG00000159884.11 TPM= 1.93 Transcript Type= NA
chr9	35658314	35661187	35658314	35661187	+	ENST00000378406.5@CCDC107	ENST00000378406.5	protein_coding	35658314,35658576,35660401,35660557	35658485,35658727,35660461,35661187	Gene ID= ENSG00000159884.11 TPM= 14.48 Transcript Type= protein_coding
chr9	35658317	35661177	35658317	35661177	+	ENST00000327351.6@CCDC107	ENST00000327351.6	protein_coding	35658317,35658576,35660401,35660557,35660766,35660940	35658485,35658727,35660461,35660647,35660858,35661177	Gene ID= ENSG00000159884.11 TPM= 26.06 Transcript Type= protein_coding
chr9	35658304	35661186	35658304	35661186	+	ENST00000378407.7@CCDC107	ENST00000378407.7	protein_coding	35658304,35658576,35660401,35660557,35660774	35658485,35658727,35660461,35660647,35661186	Gene ID= ENSG00000159884.11 TPM= 1.93 Transcript Type= protein_coding
chr9	35658314	35661511	35658314	35661511	+	ENST00000426546.6@CCDC107	ENST00000426546.6	protein_coding	35658314,35658576,35660401,35660557,35660746	35658485,35658727,35660461,35660647,35661511	Gene ID= ENSG00000159884.11 TPM= 1.93 Transcript Type= protein_coding
chr9	35682930	35689922	35682930	35689922	-	ENST00000360958.6@TPM2	ENST00000360958.6	protein_coding	35689704,35689146,35685647,35685434,35685269,35684732,35684488,35684246,35682930	35689922,35689271,35685780,35685551,35685339,35684807,35684550,35684315,35683241	Gene ID= ENSG00000198467.13 TPM= 4355.05 Transcript Type= protein_coding
chr9	35696948	35732395	35696948	35732395	-	ENST00000314888.9@TLN1	ENST00000314888.9	protein_coding	35732075,35725565,35725224,35724830,35724572,35724192,35723952,35722861,35722119,35721648,35720812,35720433,35720039,35719740,35719519,35719074,35718812,35717619,35717146,35716390,35715059,35714760,35714574,35714239,35713953,35713196,35712835,35712005,35711595,35711255,35710989,35710797,35710561,35708341,35707731,35707348,35707072,35706768,35706450,35706196,35705962,35705750,35705551,35704669,35704332,35703991,35703775,35703560,35700191,35699974,35699356,35699032,35698808,35698617,35698323,35698044,35696948	35732395,35725727,35725321,35724959,35724724,35724334,35724079,35722921,35722223,35721803,35720913,35720509,35720219,35719853,35719627,35719282,35718910,35717786,35717440,35716556,35715187,35714876,35714687,35714373,35714081,35713298,35713043,35712124,35711792,35711394,35711082,35710886,35710683,35708484,35707892,35707488,35707253,35706900,35706551,35706366,35706111,35705851,35705670,35704815,35704498,35704174,35703900,35703676,35700376,35700081,35699461,35699156,35698933,35698679,35698505,35698172,35697916	Gene ID= ENSG00000137076.20 TPM= 58.88 Transcript Type= protein_coding
chr9	35732335	35737004	35732335	35737004	+	ENST00000353704.2@CREB3	ENST00000353704.2	protein_coding	35732335,35732996,35733215,35733396,35735109,35735306,35736048,35736227,35736392	35732901,35733143,35733282,35733485,35735215,35735374,35736132,35736311,35737004	Gene ID= ENSG00000107175.11 TPM= 2.9 Transcript Type= protein_coding
chr9	35736866	35749228	35736866	35749228	-	ENST00000378103.7@GBA2	ENST00000378103.7	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866	35749228,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 66.93 Transcript Type= protein_coding
chr9	35736866	35749227	35736866	35749227	-	transcript971.chr9.nic@GBA2	transcript971.chr9.nic	protein_coding	35748346,35744615,35744297,35741672,35740825,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866	35749227,35744706,35744412,35741890,35741064,35740628,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 9.97 Transcript Type= NA
chr9	35736866	35749227	35736866	35749227	-	transcript973.chr9.nnic@GBA2	transcript973.chr9.nnic	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738037,35737748,35736866	35749227,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738152,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 4.18 Transcript Type= NA
chr9	35736867	35749227	35736867	35749227	-	transcript996.chr9.nic@GBA2	transcript996.chr9.nic	protein_coding	35748346,35744615,35744297,35741672,35740825,35740209,35739998,35739628,35739315,35739002,35738037,35736867	35749227,35744706,35744412,35741890,35741064,35740628,35740123,35739800,35739419,35739109,35738903,35737939	Gene ID= ENSG00000070610.14 TPM= 4.66 Transcript Type= NA
chr9	35736867	35749218	35736867	35749218	-	ENST00000378094.4@GBA2	ENST00000378094.4	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736867	35749218,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737604	Gene ID= ENSG00000070610.14 TPM= 3.7 Transcript Type= protein_coding
chr9	35749287	35758575	35749287	35758575	+	ENST00000378078.4@RGP1	ENST00000378078.4	protein_coding	35749287,35749737,35750243,35750658,35750840,35751266,35751627,35751956,35752651	35749408,35749871,35750379,35750741,35750989,35751412,35751754,35752145,35758575	Gene ID= ENSG00000107185.9 TPM= 16.41 Transcript Type= protein_coding
chr9	35812960	35815021	35812960	35815021	-	ENST00000259667.5@HINT2	ENST00000259667.5	protein_coding	35814899,35813644,35813445,35813266,35812960	35815021,35813784,35813549,35813338,35813145	Gene ID= ENSG00000137133.10 TPM= 33.3 Transcript Type= protein_coding
chr9	35812974	35815021	35812974	35815021	-	ENST00000461169.1@HINT2	ENST00000461169.1	protein_coding	35814899,35813644,35813445,35812974	35815021,35813784,35813549,35813338	Gene ID= ENSG00000137133.10 TPM= 4.83 Transcript Type= processed_transcript
chr9	35812960	35813770	35812960	35813770	-	ENST00000490578.1@HINT2	ENST00000490578.1	protein_coding	35813644,35812960	35813770,35813549	Gene ID= ENSG00000137133.10 TPM= 2.41 Transcript Type= processed_transcript
chr9	35853980	35856237	35853980	35856237	+	transcript1027.chr9.nnic@NA	transcript1027.chr9.nnic	NA	35853980	35856237	Gene ID= novel_gene_chr9_1028 TPM= 1.93 Transcript Type= NA
chr9	36036433	36124451	36036433	36124451	+	ENST00000377966.3@RECK	ENST00000377966.3	protein_coding	36036433,36052265,36058827,36060119,36063795,36065577,36080605,36083365,36087694,36091164,36100331,36102094,36105143,36107976,36109957,36112305,36116985,36118757,36120663,36121533,36122824	36037098,36052323,36058901,36060155,36063880,36065624,36080638,36083562,36087961,36091343,36100543,36102230,36105283,36108164,36110079,36112476,36117177,36118967,36120736,36121688,36124451	Gene ID= ENSG00000122707.11 TPM= 2.9 Transcript Type= protein_coding
chr9	36136745	36163913	36136745	36163913	+	ENST00000377960.8@GLIPR2	ENST00000377960.8	protein_coding	36136745,36147786,36148547,36150872,36162362	36136791,36147894,36148650,36150949,36163913	Gene ID= ENSG00000122694.15 TPM= 2.9 Transcript Type= protein_coding
chr9	36190856	36212061	36190856	36212061	+	ENST00000538225.5@CLTA	ENST00000538225.5	protein_coding	36190856,36197551,36198979,36204068,36210625,36211604	36191273,36197588,36199096,36204179,36210661,36212061	Gene ID= ENSG00000122705.16 TPM= 18.02 Transcript Type= protein_coding
chr9	36190923	36212056	36190923	36212056	+	ENST00000345519.9@CLTA	ENST00000345519.9	protein_coding	36190923,36197551,36198979,36204068,36211603	36191273,36197588,36199096,36204179,36212056	Gene ID= ENSG00000122705.16 TPM= 51.81 Transcript Type= protein_coding
chr9	36190932	36212058	36190932	36212058	+	ENST00000470744.5@CLTA	ENST00000470744.5	protein_coding	36190932,36197551,36198979,36204068,36210625,36211603	36191273,36197588,36199096,36204179,36210660,36212058	Gene ID= ENSG00000122705.16 TPM= 16.09 Transcript Type= protein_coding
chr9	37079857	37090507	37079857	37090507	+	ENST00000625445.1@EBLN3P	ENST00000625445.1	lincRNA	37079857,37086668	37080536,37090507	Gene ID= ENSG00000281649.1 TPM= 2.9 Transcript Type= lincRNA
chr9	37422666	37436990	37422666	37436990	+	ENST00000318158.10@GRHPR	ENST00000318158.10	protein_coding	37422666,37424845,37425922,37426538,37428484,37429732,37430511,37432008,37436661	37422833,37424975,37425994,37426654,37428572,37429836,37430646,37432138,37436990	Gene ID= ENSG00000137106.17 TPM= 139.97 Transcript Type= protein_coding
chr9	37485935	37503697	37485935	37503697	+	ENST00000377798.8@POLR1E	ENST00000377798.8	protein_coding	37485935,37486703,37487863,37489315,37492657,37493559,37495169,37495890,37498091,37500840,37501713,37503043	37486123,37486806,37487939,37489400,37492715,37493703,37495276,37495986,37498224,37500921,37501844,37503697	Gene ID= ENSG00000137054.15 TPM= 23.17 Transcript Type= protein_coding
chr9	37515143	37576328	37515143	37576328	-	transcript1076.chr9.nnic@FBXO10	transcript1076.chr9.nnic	protein_coding	37576211,37541184,37537110,37531909,37529124,37525102,37522825,37521569,37518125,37515904,37515143	37576328,37541774,37537943,37532058,37529260,37525172,37522977,37521838,37518438,37516085,37515449	Gene ID= ENSG00000147912.12 TPM= 2.41 Transcript Type= NA
chr9	37522347	37576350	37522347	37576350	-	transcript1079.chr9.nic@FBXO10	transcript1079.chr9.nic	protein_coding	37576211,37541184,37537110,37531909,37529124,37525102,37522825,37522347	37576350,37541774,37537943,37532058,37529260,37525172,37522977,37522488	Gene ID= ENSG00000147912.12 TPM= 5.31 Transcript Type= NA
chr9	37510892	37576253	37510892	37576253	-	ENST00000432825.6@FBXO10	ENST00000432825.6	protein_coding	37576211,37541184,37537110,37531909,37529124,37525102,37522825,37521569,37518125,37515904,37510892	37576253,37541774,37537943,37532058,37529260,37525172,37522977,37521838,37518438,37516085,37512721	Gene ID= ENSG00000147912.12 TPM= 28.96 Transcript Type= protein_coding
chr9	37588413	37592642	37588413	37592642	-	ENST00000321301.6@TOMM5	ENST00000321301.6	protein_coding	37592412,37588413	37592642,37588932	Gene ID= ENSG00000175768.12 TPM= 100.39 Transcript Type= protein_coding
chr9	37753772	37762621	37753772	37762621	+	transcript1106.chr9.nic@TRMT10B	transcript1106.chr9.nic	protein_coding	37753772,37761903,37762577	37753852,37762117,37762621	Gene ID= ENSG00000165275.9 TPM= 2.9 Transcript Type= NA
chr9	37778827	37779312	37778827	37779312	+	transcript1110.chr9.nnic@NA	transcript1110.chr9.nnic	NA	37778827	37779312	Gene ID= novel_gene_chr9_1111 TPM= 1.93 Transcript Type= NA
chr9	37800502	37863325	37800502	37863325	+	ENST00000377724.7@DCAF10	ENST00000377724.7	protein_coding	37800502,37819288,37842089,37854780,37857241,37860048,37861140	37801405,37819401,37842286,37854982,37857351,37860193,37863325	Gene ID= ENSG00000122741.15 TPM= 9.76 Transcript Type= protein_coding
chr9	37800778	37862009	37800778	37862009	+	transcript1120.chr9.nic@DCAF10	transcript1120.chr9.nic	protein_coding	37800778,37819288,37842089,37854780,37860048,37861140	37801405,37819401,37842286,37854982,37860193,37862009	Gene ID= ENSG00000122741.15 TPM= 2.04 Transcript Type= NA
chr9	37800768	37863325	37800768	37863325	+	transcript1125.chr9.nic@DCAF10	transcript1125.chr9.nic	protein_coding	37800768,37819288,37854780,37857241,37860048,37861140	37801405,37819401,37854982,37857351,37860193,37863325	Gene ID= ENSG00000122741.15 TPM= 7.83 Transcript Type= NA
chr9	37800778	37863349	37800778	37863349	+	transcript1127.chr9.nnic@DCAF10	transcript1127.chr9.nnic	protein_coding	37800778,37819288,37854780,37857241,37860048,37861140	37801405,37819401,37854982,37857351,37860360,37863349	Gene ID= ENSG00000122741.15 TPM= 3 Transcript Type= NA
chr9	37800778	37861964	37800778	37861964	+	transcript1128.chr9.nnic@DCAF10	transcript1128.chr9.nnic	protein_coding	37800778,37819288,37854780,37857241,37860048,37861140	37801405,37819401,37854982,37857351,37860800,37861964	Gene ID= ENSG00000122741.15 TPM= 2.04 Transcript Type= NA
chr9	37800778	37862009	37800778	37862009	+	transcript1133.chr9.nic@DCAF10	transcript1133.chr9.nic	protein_coding	37800778,37819288,37854780,37860048,37861140	37801405,37819401,37854982,37860193,37862009	Gene ID= ENSG00000122741.15 TPM= 2.04 Transcript Type= NA
chr9	37800799	37803368	37800799	37803368	+	transcript1146.chr9.nnic@NA	transcript1146.chr9.nnic	NA	37800799	37803368	Gene ID= novel_gene_chr9_1147 TPM= 1.93 Transcript Type= NA
chr9	37879400	37904353	37879400	37904353	-	ENST00000496760.5@SLC25A51	ENST00000496760.5	protein_coding	37904068,37899829,37881518,37879400	37904353,37899950,37881631,37880748	Gene ID= ENSG00000122696.13 TPM= 2.9 Transcript Type= processed_transcript
chr9	37887651	37904133	37887651	37904133	-	ENST00000242275.6@SLC25A51	ENST00000242275.6	protein_coding	37904068,37899829,37887651	37904133,37899950,37888592	Gene ID= ENSG00000122696.13 TPM= 2.9 Transcript Type= protein_coding
chr9	37886064	37887020	37886064	37887020	+	transcript1144.chr9.nnic@NA	transcript1144.chr9.nnic	NA	37886064	37887020	Gene ID= novel_gene_chr9_1145 TPM= 1.93 Transcript Type= NA
chr9	37919134	38069211	37919134	38069211	-	ENST00000377707.3@SHB	ENST00000377707.3	protein_coding	38067929,38016011,37974622,37955883,37948635,37919134	38069211,38016131,37974837,37956054,37948754,37920004	Gene ID= ENSG00000107338.9 TPM= 2.9 Transcript Type= protein_coding
chr9	38392664	38398661	38392664	38398661	+	ENST00000377698.3@ALDH1B1	ENST00000377698.3	protein_coding	38392664,38395740	38392807,38398661	Gene ID= ENSG00000137124.7 TPM= 52.13 Transcript Type= protein_coding
chr9	62376523	62435256	62376523	62435256	+	transcript1173.chr9.nnic@FGF7P6	transcript1173.chr9.nnic	transcribed_unprocessed_pseudogene	62376523,62386774,62432876,62434067	62376813,62386883,62432979,62435256	Gene ID= ENSG00000227449.8 TPM= 2.9 Transcript Type= NA
chr9	62865597	62898087	62865597	62898087	-	ENST00000445604.6@AL512625.3	ENST00000445604.6	lincRNA	62897419,62869190,62867697,62866967,62865597	62898087,62869304,62868233,62867110,62865733	Gene ID= ENSG00000234665.8 TPM= 1.93 Transcript Type= lincRNA
chr9	62868139	62897777	62868139	62897777	-	ENST00000585533.1@AL512625.3	ENST00000585533.1	lincRNA	62897529,62869190,62868139	62897777,62869304,62868233	Gene ID= ENSG00000234665.8 TPM= 3.86 Transcript Type= lincRNA
chr9	65675868	65733989	65675868	65733989	+	transcript1193.chr9.nnic@CBWD5	transcript1193.chr9.nnic	protein_coding	65675868,65679166,65681574,65682766,65690967,65692571,65693386,65698515,65700251,65702970,65708902,65720041,65731630,65731802,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65693473,65698561,65700337,65703014,65708958,65720092,65731698,65731867,65733989	Gene ID= ENSG00000147996.16 TPM= 1.93 Transcript Type= NA
chr9	65675868	65733670	65675868	65733670	+	transcript1196.chr9.nic@CBWD5	transcript1196.chr9.nic	protein_coding	65675868,65679166,65681574,65682766,65690967,65692571,65693386,65698515,65702970,65708902,65720041,65731630,65731802,65732993,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65693473,65698561,65703014,65708958,65720092,65731698,65731867,65733122,65733670	Gene ID= ENSG00000147996.16 TPM= 1.93 Transcript Type= NA
chr9	65675799	65734041	65675799	65734041	+	ENST00000382405.7@CBWD5	ENST00000382405.7	protein_coding	65675799,65679166,65681574,65682766,65690967,65692571,65698515,65700251,65702970,65708902,65720041,65731630,65731802,65732993,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65698561,65700337,65703014,65708958,65720092,65731698,65731867,65733122,65734041	Gene ID= ENSG00000147996.16 TPM= 62.75 Transcript Type= protein_coding
chr9	65675875	65682577	65675875	65682577	+	ENST00000377384.5@CBWD5	ENST00000377384.5	protein_coding	65675875,65679166,65681574	65676130,65679252,65682577	Gene ID= ENSG00000147996.16 TPM= 27.99 Transcript Type= protein_coding
chr9	66268246	66269936	66268246	66269936	-	transcript1206.chr9.nnic@NA	transcript1206.chr9.nnic	NA	66268246	66269936	Gene ID= novel_gene_chr9_1207 TPM= 3.86 Transcript Type= NA
chr9	66900729	66921439	66900729	66921439	+	ENST00000621410.4@ZNF658	ENST00000621410.4	protein_coding	66900729,66903518,66908238,66908639,66917805	66900836,66903576,66908364,66908734,66921439	Gene ID= ENSG00000274349.4 TPM= 4.83 Transcript Type= protein_coding
chr9	68241945	68300011	68241945	68300011	+	transcript1215.chr9.nic@CBWD3	transcript1215.chr9.nic	protein_coding	68241945,68245213,68247613,68248806,68258532,68259347,68264468,68266220,68268934,68274882,68285989,68297580,68297752,68298964,68299481	68242185,68245299,68247709,68248897,68258569,68259434,68264514,68266306,68268978,68274938,68286040,68297648,68297817,68299093,68300011	Gene ID= ENSG00000196873.15 TPM= 1.93 Transcript Type= NA
chr9	68780039	68781414	68780039	68781414	+	transcript1217.chr9.nnic@NA	transcript1217.chr9.nnic	NA	68780039	68781414	Gene ID= novel_gene_chr9_1218 TPM= 19.31 Transcript Type= NA
chr9	69121451	69255199	69121451	69255199	+	transcript1237.chr9.nnic@TJP2	transcript1237.chr9.nnic	protein_coding	69121451,69151651,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69249375,69251035,69252815,69254209	69121725,69151771,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69249485,69251364,69252900,69255199	Gene ID= ENSG00000119139.17 TPM= 5.79 Transcript Type= NA
chr9	69174130	69255199	69174130	69255199	+	transcript1242.chr9.nic@TJP2	transcript1242.chr9.nic	protein_coding	69174130,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69251035,69252815,69254209	69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69251364,69252900,69255199	Gene ID= ENSG00000119139.17 TPM= 10.62 Transcript Type= NA
chr9	69174277	69255204	69174277	69255204	+	ENST00000348208.8@TJP2	ENST00000348208.8	protein_coding	69174277,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69252815,69254209	69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69252900,69255204	Gene ID= ENSG00000119139.17 TPM= 1.93 Transcript Type= protein_coding
chr9	69324791	69392455	69324791	69392455	+	transcript1253.chr9.nnic@FAM189A2	transcript1253.chr9.nnic	protein_coding	69324791,69336213,69371499,69375736,69377370,69377611,69383630,69383947,69385795,69388158,69391601	69325723,69336269,69371609,69375864,69377477,69377744,69383759,69384025,69385947,69388450,69392455	Gene ID= ENSG00000135063.17 TPM= 64.19 Transcript Type= NA
chr9	69325232	69392454	69325232	69392454	+	transcript1254.chr9.nnic@FAM189A2	transcript1254.chr9.nnic	protein_coding	69325232,69336213,69371499,69375736,69377370,69377611,69383630,69383947,69385795,69391601	69325723,69336269,69371609,69375864,69377477,69377744,69383759,69384025,69385947,69392454	Gene ID= ENSG00000135063.17 TPM= 2.41 Transcript Type= NA
chr9	69757123	69759959	69757123	69759959	-	ENST00000472967.2@PTAR1	ENST00000472967.2	protein_coding	69759853,69757123	69759959,69758704	Gene ID= ENSG00000188647.12 TPM= 1.93 Transcript Type= protein_coding
chr9	70043581	70226970	70043581	70226970	+	ENST00000377182.4@MAMDC2	ENST00000377182.4	protein_coding	70043581,70044584,70108211,70109720,70112995,70126159,70131519,70140145,70143554,70168702,70170479,70218337,70225750,70225968	70044231,70044697,70108482,70109804,70113132,70126415,70131612,70140288,70143819,70168795,70170631,70218596,70225834,70226970	Gene ID= ENSG00000165072.9 TPM= 10.62 Transcript Type= protein_coding
chr9	70258934	70347634	70258934	70347634	+	transcript1269.chr9.nic@SMC5	transcript1269.chr9.nic	protein_coding	70258934,70264304,70267923,70277310,70278491,70280759,70282422,70286200,70297966,70300046,70305247,70314742,70315446,70318514,70318794,70323483,70324021,70344144,70346605,70347066,70347613	70259263,70264445,70267975,70277472,70278625,70280899,70282583,70286271,70298221,70300200,70305360,70314836,70315578,70318687,70318963,70323606,70324143,70344269,70346649,70347161,70347634	Gene ID= ENSG00000198887.8 TPM= 1.93 Transcript Type= NA
chr9	70258962	70354888	70258962	70354888	+	ENST00000361138.6@SMC5	ENST00000361138.6	protein_coding	70258962,70264304,70267923,70277310,70278491,70280759,70282422,70286200,70297966,70300046,70305247,70314742,70315446,70318514,70318794,70323483,70324021,70344144,70346605,70347066,70347613,70347919,70350114,70350376,70352191	70259263,70264445,70267975,70277472,70278625,70280899,70282583,70286271,70298221,70300200,70305360,70314836,70315578,70318687,70318963,70323606,70324143,70344269,70346649,70347161,70347717,70348038,70350293,70350471,70354888	Gene ID= ENSG00000198887.8 TPM= 12.55 Transcript Type= protein_coding
chr9	70384597	70414624	70384597	70414624	-	ENST00000377126.3@KLF9	ENST00000377126.3	protein_coding	70412859,70384597	70414624,70388005	Gene ID= ENSG00000119138.4 TPM= 62.75 Transcript Type= protein_coding
chr9	71910589	71912332	71910589	71912332	+	transcript1293.chr9.nnic@NA	transcript1293.chr9.nnic	NA	71910589	71912332	Gene ID= novel_gene_chr9_1294 TPM= 1.93 Transcript Type= NA
chr9	72354458	72365197	72354458	72365197	-	ENST00000376962.9@ZFAND5	ENST00000376962.9	protein_coding	72364696,72363470,72360628,72360110,72359418,72356931,72354458	72365197,72363606,72360787,72360221,72359521,72357056,72356101	Gene ID= ENSG00000107372.12 TPM= 282.19 Transcript Type= protein_coding
chr9	72354458	72365235	72354458	72365235	-	ENST00000376960.8@ZFAND5	ENST00000376960.8	protein_coding	72364696,72360628,72360110,72359418,72356931,72354458	72365235,72360787,72360221,72359521,72357056,72356101	Gene ID= ENSG00000107372.12 TPM= 292.81 Transcript Type= protein_coding
chr9	72351592	72353487	72351592	72353487	-	transcript1315.chr9.nnic@NA	transcript1315.chr9.nnic	NA	72351592	72353487	Gene ID= novel_gene_chr9_1316 TPM= 3.86 Transcript Type= NA
chr9	72900662	72953055	72900662	72953055	-	ENST00000297785.7@ALDH1A1	ENST00000297785.7	protein_coding	72952935,72940148,72930879,72928892,72927116,72925484,72924019,72918720,72916920,72911958,72909602,72905958,72900662	72953055,72940252,72931019,72929021,72927177,72925612,72924132,72918822,72917104,72912122,72909759,72906032,72901280	Gene ID= ENSG00000165092.12 TPM= 20.27 Transcript Type= protein_coding
chr9	73151757	73170393	73151757	73170393	+	ENST00000257497.10@ANXA1	ENST00000257497.10	protein_coding	73151757,73158522,73158695,73159329,73160263,73160803,73162782,73163476,73165116,73166097,73167497,73169032,73170051	73151924,73158601,73158803,73159423,73160376,73160893,73162861,73163532,73165209,73166192,73167555,73169154,73170393	Gene ID= ENSG00000135046.13 TPM= 31.86 Transcript Type= protein_coding
chr9	74946581	74952886	74946581	74952886	-	ENST00000376854.5@C9orf40	ENST00000376854.5	protein_coding	74952186,74946581	74952886,74948206	Gene ID= ENSG00000135045.6 TPM= 3.86 Transcript Type= protein_coding
chr9	74981020	75028394	74981020	75028394	-	ENST00000376834.7@CARNMT1	ENST00000376834.7	protein_coding	75028012,75017253,75016268,74999730,74998598,74996447,74984907,74981020	75028394,75017448,75016431,74999870,74998776,74996560,74985010,74983868	Gene ID= ENSG00000156017.12 TPM= 7.72 Transcript Type= protein_coding
chr9	75061200	75088225	75061200	75088225	-	transcript1339.chr9.nnic@NMRK1	transcript1339.chr9.nnic	protein_coding	75088008,75083087,75077490,75077159,75069895,75069742,75068996,75066757,75061200	75088225,75083150,75077580,75077207,75070042,75069813,75069122,75066840,75061567	Gene ID= ENSG00000106733.20 TPM= 1.93 Transcript Type= NA
chr9	75061200	75088209	75061200	75088209	-	ENST00000361092.8@NMRK1	ENST00000361092.8	protein_coding	75088008,75083087,75077490,75077159,75069895,75069742,75068996,75066757,75061200	75088209,75083150,75077580,75077207,75070042,75069813,75069102,75066840,75061567	Gene ID= ENSG00000106733.20 TPM= 7.72 Transcript Type= protein_coding
chr9	76385517	76394505	76385517	76394505	-	ENST00000376736.5@RFK	ENST00000376736.5	protein_coding	76394090,76392418,76388554,76385517	76394505,76392569,76388656,76387529	Gene ID= ENSG00000135002.11 TPM= 47.3 Transcript Type= protein_coding
chr9	78234839	78236451	78234839	78236451	-	transcript1367.chr9.nnic@NA	transcript1367.chr9.nnic	NA	78234839	78236451	Gene ID= novel_gene_chr9_1368 TPM= 1.93 Transcript Type= NA
chr9	79571773	79725499	79571773	79725499	+	ENST00000376552.6@TLE4	ENST00000376552.6	protein_coding	79571773,79573689,79574873,79576133,79612656,79627374,79652593,79654059,79704783,79705889,79706747,79708118,79708593,79709623,79718722,79720046,79721741,79722451,79722959,79725037	79572835,79573786,79574936,79576177,79612718,79627448,79652794,79654075,79704902,79705942,79706899,79708250,79708786,79709699,79718971,79720293,79721888,79722601,79723035,79725499	Gene ID= ENSG00000106829.18 TPM= 3.86 Transcript Type= protein_coding
chr9	79725035	79726739	79725035	79726739	+	transcript1372.chr9.nnic@NA	transcript1372.chr9.nnic	NA	79725035	79726739	Gene ID= novel_gene_chr9_1373 TPM= 2.9 Transcript Type= NA
chr9	81583683	81689547	81583683	81689547	-	transcript1377.chr9.nic@TLE1	transcript1377.chr9.nic	protein_coding	81688217,81687334,81685833,81685676,81653974,81652184,81634097,81633348,81620441,81616646,81615982,81613377,81611769,81610220,81593025,81590805,81587681,81585505,81584448,81583683	81689547,81687434,81685896,81685720,81654036,81652288,81634301,81633364,81620557,81616699,81616134,81613521,81611959,81610296,81593274,81591052,81587828,81585655,81584524,81584305	Gene ID= ENSG00000196781.14 TPM= 9.01 Transcript Type= NA
chr9	81633469	81689628	81633469	81689628	-	transcript1390.chr9.nic@TLE1	transcript1390.chr9.nic	protein_coding	81688217,81687334,81685833,81685676,81653974,81652184,81633469	81689628,81687434,81685896,81685720,81654036,81652288,81634301	Gene ID= ENSG00000196781.14 TPM= 41.99 Transcript Type= NA
chr9	83242990	83267287	83242990	83267287	-	ENST00000328788.5@FRMD3	ENST00000328788.5	protein_coding	83267012,83248055,83242990	83267287,83248516,83243215	Gene ID= ENSG00000172159.15 TPM= 19.31 Transcript Type= protein_coding
chr9	83244622	83267187	83244622	83267187	-	transcript1402.chr9.nnic@FRMD3	transcript1402.chr9.nnic	protein_coding	83267012,83246764,83244622	83267187,83248516,83245505	Gene ID= ENSG00000172159.15 TPM= 3.86 Transcript Type= NA
chr9	83246745	83267268	83246745	83267268	-	transcript1403.chr9.nic@FRMD3	transcript1403.chr9.nic	protein_coding	83267012,83246745	83267268,83248516	Gene ID= ENSG00000172159.15 TPM= 1.93 Transcript Type= NA
chr9	83661429	83707970	83661429	83707970	-	transcript1415.chr9.nnic@UBQLN1	transcript1415.chr9.nnic	protein_coding	83707500,83686004,83682951,83678441,83677727,83669185,83666350,83665030,83663875,83661429	83707970,83686155,83683066,83678599,83677961,83669327,83666433,83665145,83664043,83661939	Gene ID= ENSG00000135018.13 TPM= 6.27 Transcript Type= NA
chr9	83661429	83707986	83661429	83707986	-	transcript1419.chr9.nnic@UBQLN1	transcript1419.chr9.nnic	protein_coding	83707500,83686004,83682951,83679775,83678441,83677727,83669185,83663875,83661429	83707986,83686155,83683066,83680037,83678599,83677961,83669327,83664043,83661939	Gene ID= ENSG00000135018.13 TPM= 11.9 Transcript Type= NA
chr9	83661429	83707934	83661429	83707934	-	ENST00000257468.11@UBQLN1	ENST00000257468.11	protein_coding	83707500,83686004,83682951,83679775,83678441,83677727,83669185,83665030,83663875,83661429	83707934,83686155,83683066,83680037,83678599,83677961,83669327,83665145,83664043,83661939	Gene ID= ENSG00000135018.13 TPM= 50.51 Transcript Type= protein_coding
chr9	83705248	83707694	83705248	83707694	-	transcript1435.chr9.nnic@NA	transcript1435.chr9.nnic	NA	83705248	83707694	Gene ID= novel_gene_chr9_1436 TPM= 1.93 Transcript Type= NA
chr9	83707130	83709384	83707130	83709384	+	transcript1433.chr9.nnic@NA	transcript1433.chr9.nnic	NA	83707130	83709384	Gene ID= novel_gene_chr9_1434 TPM= 1.93 Transcript Type= NA
chr9	83727072	83729334	83727072	83729334	-	transcript1437.chr9.nnic@NA	transcript1437.chr9.nnic	NA	83727072	83729334	Gene ID= novel_gene_chr9_1438 TPM= 1.93 Transcript Type= NA
chr9	83739425	83817486	83739425	83817486	-	transcript1442.chr9.nic@GKAP1	transcript1442.chr9.nic	protein_coding	83816996,83806302,83799185,83788601,83784715,83780382,83753258,83748309,83742530,83741952,83739425	83817486,83806560,83799328,83788678,83784838,83780404,83753359,83748372,83742600,83742029,83739744	Gene ID= ENSG00000165113.12 TPM= 3.21 Transcript Type= NA
chr9	83784794	83817837	83784794	83817837	-	transcript1446.chr9.nic@GKAP1	transcript1446.chr9.nic	protein_coding	83817517,83816996,83806302,83799185,83788601,83784794	83817837,83817127,83806560,83799328,83788678,83784838	Gene ID= ENSG00000165113.12 TPM= 8.21 Transcript Type= NA
chr9	83814135	83817769	83814135	83817769	-	transcript1451.chr9.nnic@GKAP1	transcript1451.chr9.nnic	protein_coding	83817517,83816996,83814135	83817769,83817127,83816016	Gene ID= ENSG00000165113.12 TPM= 2.9 Transcript Type= NA
chr9	83739425	83817632	83739425	83817632	-	ENST00000376365.7@GKAP1	ENST00000376365.7	protein_coding	83817517,83816996,83806302,83799185,83788601,83784715,83780382,83753258,83748309,83742530,83741952,83739425	83817632,83817127,83806560,83799328,83788678,83784838,83780404,83753359,83748372,83742600,83742029,83739744	Gene ID= ENSG00000165113.12 TPM= 5.15 Transcript Type= protein_coding
chr9	83739421	83817742	83739421	83817742	-	ENST00000376371.6@GKAP1	ENST00000376371.6	protein_coding	83817517,83816996,83806302,83799185,83788601,83784715,83780382,83768818,83753258,83748309,83742530,83741952,83739421	83817742,83817127,83806560,83799328,83788678,83784838,83780404,83768970,83753359,83748372,83742600,83742029,83739744	Gene ID= ENSG00000165113.12 TPM= 7.08 Transcript Type= protein_coding
chr9	83910751	83921485	83910751	83921485	-	transcript1453.chr9.nnic@KIF27	transcript1453.chr9.nnic	protein_coding	83921371,83920106,83915294,83910751	83921485,83920212,83915678,83910888	Gene ID= ENSG00000165115.14 TPM= 1.93 Transcript Type= NA
chr9	83938311	83956717	83938311	83956717	-	ENST00000376344.7@C9orf64	ENST00000376344.7	protein_coding	83956164,83955381,83944794,83938311	83956717,83955640,83944989,83939743	Gene ID= ENSG00000165118.14 TPM= 16.41 Transcript Type= protein_coding
chr9	83968084	83980269	83968084	83980269	-	ENST00000376263.7@HNRNPK	ENST00000376263.7	protein_coding	83980153,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968084	83980269,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440	Gene ID= ENSG00000165119.20 TPM= 5.42 Transcript Type= protein_coding
chr9	83968197	83980634	83968197	83980634	-	transcript1467.chr9.nic@HNRNPK	transcript1467.chr9.nic	protein_coding	83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968197	83980634,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380	Gene ID= ENSG00000165119.20 TPM= 3 Transcript Type= NA
chr9	83968909	83980250	83968909	83980250	-	ENST00000360384.9@HNRNPK	ENST00000360384.9	protein_coding	83980153,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968909	83980250,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380	Gene ID= ENSG00000165119.20 TPM= 7.96 Transcript Type= protein_coding
chr9	83968909	83980215	83968909	83980215	-	transcript1475.chr9.nnic@HNRNPK	transcript1475.chr9.nnic	protein_coding	83980119,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968909	83980215,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440	Gene ID= ENSG00000165119.20 TPM= 7.96 Transcript Type= NA
chr9	83968083	83980604	83968083	83980604	-	ENST00000376281.8@HNRNPK	ENST00000376281.8	protein_coding	83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968083	83980604,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440	Gene ID= ENSG00000165119.20 TPM= 5.9 Transcript Type= protein_coding
chr9	83980752	84004074	83980752	84004074	+	transcript1490.chr9.nnic@RMI1	transcript1490.chr9.nnic	protein_coding	83980752,83988329,83995021,83999709,84000951	83981004,83988518,83995142,83999797,84004074	Gene ID= ENSG00000178966.16 TPM= 1.93 Transcript Type= NA
chr9	85546542	85741954	85546542	85741954	-	transcript1498.chr9.nnic@AGTPBP1	transcript1498.chr9.nnic	protein_coding	85741775,85712502,85692689,85681268,85678335,85677436,85672550,85669485,85660936,85657435,85655143,85646321,85642827,85633137,85632662,85621202,85619215,85618983,85596362,85592560,85589528,85588298,85586831,85585463,85578920,85575315,85546542	85741954,85712566,85692813,85681335,85678398,85677582,85672681,85669578,85660973,85657643,85655320,85646418,85642943,85633374,85633037,85621285,85619301,85619131,85596449,85592704,85589681,85588478,85586960,85585594,85579096,85575475,85547286	Gene ID= ENSG00000135049.15 TPM= 3.86 Transcript Type= NA
chr9	85546542	85741886	85546542	85741886	-	ENST00000357081.7@AGTPBP1	ENST00000357081.7	protein_coding	85741775,85712502,85692689,85681268,85678335,85677436,85672550,85669485,85660936,85657435,85655143,85646321,85642827,85632662,85621202,85619215,85618983,85596362,85592560,85589528,85588298,85586831,85585463,85578920,85575315,85546542	85741886,85712566,85692813,85681335,85678398,85677582,85672681,85669578,85660973,85657643,85655320,85646418,85642943,85633374,85621285,85619301,85619131,85596449,85592704,85589681,85588478,85586960,85585594,85579096,85575475,85547286	Gene ID= ENSG00000135049.15 TPM= 10.62 Transcript Type= protein_coding
chr9	85941272	86022298	85941272	86022298	+	transcript1525.chr9.nnic@NAA35	transcript1525.chr9.nnic	protein_coding	85941272,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539,86017498,86018255,86018699,86020889,86021901	85941405,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016675,86017565,86018395,86018821,86020969,86022298	Gene ID= ENSG00000135040.15 TPM= 2.9 Transcript Type= NA
chr9	85941230	86016670	85941230	86016670	+	transcript1528.chr9.nic@NAA35	transcript1528.chr9.nic	protein_coding	85941230,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539	85941874,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016670	Gene ID= ENSG00000135040.15 TPM= 11.58 Transcript Type= NA
chr9	85941172	86016670	85941172	86016670	+	transcript1529.chr9.nic@NAA35	transcript1529.chr9.nic	protein_coding	85941172,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539	85941273,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016670	Gene ID= ENSG00000135040.15 TPM= 6.76 Transcript Type= NA
chr9	85941146	86022298	85941146	86022298	+	ENST00000361671.9@NAA35	ENST00000361671.9	protein_coding	85941146,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539,86017498,86018255,86018699,86020889,86021901	85941273,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016675,86017565,86018395,86018821,86020969,86022298	Gene ID= ENSG00000135040.15 TPM= 4.83 Transcript Type= protein_coding
chr9	86026146	86099558	86026146	86099558	-	ENST00000388712.7@GOLM1	ENST00000388712.7	protein_coding	86099411,86079192,86077412,86052537,86046470,86040739,86036348,86035368,86033282,86026146	86099558,86079341,86077591,86052591,86046572,86040868,86036507,86035625,86033395,86027893	Gene ID= ENSG00000135052.16 TPM= 4.83 Transcript Type= protein_coding
chr9	86264546	86282529	86264546	86282529	-	ENST00000375991.8@ISCA1	ENST00000375991.8	protein_coding	86282378,86274189,86272007,86264546	86282529,86274242,86272112,86266191	Gene ID= ENSG00000135070.14 TPM= 71.43 Transcript Type= protein_coding
chr9	86944363	86947189	86944363	86947189	-	ENST00000298743.8@GAS1	ENST00000298743.8	protein_coding	86944363	86947189	Gene ID= ENSG00000180447.6 TPM= 11.58 Transcript Type= protein_coding
chr9	86948671	86951532	86948671	86951532	+	transcript1549.chr9.nic@GAS1RR	transcript1549.chr9.nic	lincRNA	86948671,86950867	86948993,86951532	Gene ID= ENSG00000226237.1 TPM= 1.93 Transcript Type= NA
chr9	87725519	87731392	87725519	87731392	+	ENST00000343150.9@CTSL	ENST00000343150.9	protein_coding	87725519,87727594,87728027,87728250,87728585,87729573,87730381,87731008	87726398,87727729,87728149,87728396,87728809,87729735,87730498,87731392	Gene ID= ENSG00000135047.14 TPM= 26.71 Transcript Type= protein_coding
chr9	87726121	87731392	87726121	87731392	+	transcript1556.chr9.nic@CTSL	transcript1556.chr9.nic	protein_coding	87726121,87727594,87728027,87728250,87728585,87729573,87730381,87731008	87726308,87727729,87728149,87728396,87728809,87729735,87730498,87731392	Gene ID= ENSG00000135047.14 TPM= 4.51 Transcript Type= NA
chr9	87726109	87731386	87726109	87731386	+	ENST00000340342.10@CTSL	ENST00000340342.10	protein_coding	87726109,87727594,87728027,87728250,87728585,87729573,87730381,87731008	87726253,87727729,87728149,87728396,87728809,87729735,87730498,87731386	Gene ID= ENSG00000135047.14 TPM= 22.85 Transcript Type= protein_coding
chr9	88991447	89005010	88991447	89005010	+	ENST00000358157.2@S1PR3	ENST00000358157.2	protein_coding	88991447,89001054	88991695,89005010	Gene ID= ENSG00000213694.3 TPM= 12.55 Transcript Type= protein_coding
chr9	89310025	89310816	89310025	89310816	-	transcript1564.chr9.nnic@NA	transcript1564.chr9.nnic	NA	89310025	89310816	Gene ID= novel_gene_chr9_1565 TPM= 24.13 Transcript Type= NA
chr9	89311198	89316703	89311198	89316703	+	ENST00000314355.6@CKS2	ENST00000314355.6	protein_coding	89311198,89315170,89316373	89311351,89315297,89316703	Gene ID= ENSG00000123975.4 TPM= 4.83 Transcript Type= protein_coding
chr9	89318470	89359642	89318470	89359642	+	transcript1577.chr9.nnic@SECISBP2	transcript1577.chr9.nnic	protein_coding	89318470,89319652,89325427,89325897,89328660,89332908,89334522,89338458,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359642	Gene ID= ENSG00000187742.14 TPM= 4.51 Transcript Type= NA
chr9	89318470	89359642	89318470	89359642	+	transcript1579.chr9.nnic@SECISBP2	transcript1579.chr9.nnic	protein_coding	89318470,89319652,89325548,89325897,89328660,89332908,89334522,89338458,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359642	Gene ID= ENSG00000187742.14 TPM= 3.54 Transcript Type= NA
chr9	89318470	89338510	89318470	89338510	+	transcript1580.chr9.nic@SECISBP2	transcript1580.chr9.nic	protein_coding	89318470,89319652,89325427,89325897,89328660,89332908,89334025,89334522,89338458	89318612,89319797,89325676,89326038,89328886,89332986,89334155,89334730,89338510	Gene ID= ENSG00000187742.14 TPM= 6.27 Transcript Type= NA
chr9	89318470	89338510	89318470	89338510	+	transcript1581.chr9.nnic@SECISBP2	transcript1581.chr9.nnic	protein_coding	89318470,89319652,89325427,89325897,89328660,89332908,89334025,89334560,89338458	89318612,89319797,89325676,89326038,89328886,89332986,89334155,89334730,89338510	Gene ID= ENSG00000187742.14 TPM= 1.93 Transcript Type= NA
chr9	89318470	89338510	89318470	89338510	+	transcript1582.chr9.nnic@SECISBP2	transcript1582.chr9.nnic	protein_coding	89318470,89319652,89325427,89325897,89328660,89332908,89334025,89334636,89338458	89318612,89319797,89325676,89326038,89328886,89332986,89334155,89334730,89338510	Gene ID= ENSG00000187742.14 TPM= 2.9 Transcript Type= NA
chr9	89318470	89338510	89318470	89338510	+	transcript1587.chr9.nic@SECISBP2	transcript1587.chr9.nic	protein_coding	89318470,89319652,89325427,89325897,89328660,89332908,89334636,89338458	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338510	Gene ID= ENSG00000187742.14 TPM= 6.76 Transcript Type= NA
chr9	89318490	89338510	89318490	89338510	+	transcript1589.chr9.nnic@SECISBP2	transcript1589.chr9.nnic	protein_coding	89318490,89325427,89325897,89328660,89332908,89334025,89334522,89338458	89318612,89325676,89326038,89328886,89332986,89334155,89334730,89338510	Gene ID= ENSG00000187742.14 TPM= 2.41 Transcript Type= NA
chr9	89318530	89338510	89318530	89338510	+	transcript1594.chr9.nnic@SECISBP2	transcript1594.chr9.nnic	protein_coding	89318530,89319652,89325897,89328660,89332908,89334636,89338458	89318612,89319797,89326038,89328886,89332986,89334730,89338510	Gene ID= ENSG00000187742.14 TPM= 1.93 Transcript Type= NA
chr9	89318506	89359650	89318506	89359650	+	ENST00000375807.7@SECISBP2	ENST00000375807.7	protein_coding	89318506,89319652,89325427,89325897,89328660,89332908,89334522,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359650	Gene ID= ENSG00000187742.14 TPM= 7.4 Transcript Type= protein_coding
chr9	89361609	89498085	89361609	89498085	-	transcript1598.chr9.nnic@SEMA4D	transcript1598.chr9.nnic	protein_coding	89497919,89475485,89474539,89455888,89418056,89405351,89402871,89399276,89396737,89393562,89392423,89391264,89388872,89388636,89387386,89386367,89381174,89381055,89376833,89363741,89363430,89361609	89498085,89475550,89474623,89455953,89418118,89405699,89403016,89399338,89396835,89393655,89392536,89391415,89389047,89388792,89387608,89386482,89381346,89381098,89377051,89363950,89363527,89362428	Gene ID= ENSG00000187764.11 TPM= 5.31 Transcript Type= NA
chr9	89361609	89498140	89361609	89498140	-	transcript1599.chr9.nic@SEMA4D	transcript1599.chr9.nic	protein_coding	89497919,89455888,89418363,89418056,89405351,89402871,89399276,89396737,89393562,89392423,89391264,89388872,89388636,89387386,89386367,89381174,89381055,89376833,89363741,89363430,89361609	89498140,89455953,89418437,89418118,89405699,89403016,89399338,89396835,89393655,89392536,89391415,89389047,89388792,89387608,89386482,89381346,89381098,89377051,89363950,89363527,89362428	Gene ID= ENSG00000187764.11 TPM= 6.27 Transcript Type= NA
chr9	89361609	89498140	89361609	89498140	-	transcript1605.chr9.nic@SEMA4D	transcript1605.chr9.nic	protein_coding	89497919,89455888,89405351,89402871,89399276,89396737,89393562,89392423,89391264,89388872,89388636,89387386,89386367,89381174,89381055,89376833,89363741,89363430,89361609	89498140,89455953,89405699,89403016,89399338,89396835,89393655,89392536,89391415,89389047,89388792,89387608,89386482,89381346,89381098,89377051,89363950,89363527,89362428	Gene ID= ENSG00000187764.11 TPM= 9.17 Transcript Type= NA
chr9	89453858	89498140	89453858	89498140	-	transcript1606.chr9.nic@SEMA4D	transcript1606.chr9.nic	protein_coding	89497919,89453858	89498140,89455953	Gene ID= ENSG00000187764.11 TPM= 1.93 Transcript Type= NA
chr9	89361609	89498130	89361609	89498130	-	ENST00000455551.6@SEMA4D	ENST00000455551.6	protein_coding	89497919,89455888,89418056,89405351,89402871,89399276,89396737,89393562,89392423,89391264,89388872,89388636,89387386,89386367,89381174,89381055,89376833,89363741,89363430,89361609	89498130,89455953,89418118,89405699,89403016,89399338,89396835,89393655,89392536,89391415,89389047,89388792,89387608,89386482,89381346,89381098,89377051,89363950,89363527,89362428	Gene ID= ENSG00000187764.11 TPM= 71.92 Transcript Type= protein_coding
chr9	89605012	89606553	89605012	89606553	+	transcript1614.chr9.nnic@NA	transcript1614.chr9.nnic	NA	89605012	89606553	Gene ID= novel_gene_chr9_1615 TPM= 7.72 Transcript Type= NA
chr9	89605013	89606555	89605013	89606555	+	ENST00000252506.10@GADD45G	ENST00000252506.10	protein_coding	89605013,89605432,89605667,89605969	89605174,89605533,89605880,89606555	Gene ID= ENSG00000130222.10 TPM= 461.1 Transcript Type= protein_coding
chr9	89605949	89608635	89605949	89608635	+	transcript1616.chr9.nnic@NA	transcript1616.chr9.nnic	NA	89605949	89608635	Gene ID= novel_gene_chr9_1617 TPM= 3.86 Transcript Type= NA
chr9	89639698	89642409	89639698	89642409	+	transcript1631.chr9.nnic@NA	transcript1631.chr9.nnic	NA	89639698	89642409	Gene ID= novel_gene_chr9_1632 TPM= 26.06 Transcript Type= NA
chr9	89639775	89667460	89639775	89667460	+	transcript1623.chr9.nnic@UNQ6494	transcript1623.chr9.nnic	lincRNA	89639775,89644353,89664928	89639979,89644454,89667460	Gene ID= ENSG00000237372.2 TPM= 2.9 Transcript Type= NA
chr9	89639783	89666107	89639783	89666107	+	transcript1629.chr9.nic@UNQ6494	transcript1629.chr9.nic	lincRNA	89639783,89664928	89639979,89666107	Gene ID= ENSG00000237372.2 TPM= 1.93 Transcript Type= NA
chr9	91213815	91361913	91213815	91361913	-	ENST00000375731.8@AUH	ENST00000375731.8	protein_coding	91361628,91356088,91355883,91325318,91297984,91296021,91220805,91217277,91216059,91213815	91361913,91356155,91355970,91325404,91298076,91296077,91220992,91217327,91216106,91214425	Gene ID= ENSG00000148090.11 TPM= 12.55 Transcript Type= protein_coding
chr9	91288221	91291944	91288221	91291944	+	transcript1649.chr9.nnic@NA	transcript1649.chr9.nnic	NA	91288221	91291944	Gene ID= novel_gene_chr9_1650 TPM= 5.79 Transcript Type= NA
chr9	91409048	91424577	91409048	91424577	-	transcript1654.chr9.nnic@NFIL3	transcript1654.chr9.nnic	protein_coding	91424409,91409048	91424577,91410906	Gene ID= ENSG00000165030.3 TPM= 5.79 Transcript Type= NA
chr9	91409045	91423862	91409045	91423862	-	ENST00000297689.3@NFIL3	ENST00000297689.3	protein_coding	91423640,91409045	91423862,91410906	Gene ID= ENSG00000165030.3 TPM= 152.52 Transcript Type= protein_coding
chr9	92107176	92115395	92107176	92115395	-	transcript1657.chr9.nic@SPTLC1	transcript1657.chr9.nic	protein_coding	92115314,92112455,92108740,92107176	92115395,92112562,92108834,92108069	Gene ID= ENSG00000090054.13 TPM= 1.93 Transcript Type= NA
chr9	92210211	92293756	92210211	92293756	-	ENST00000627121.2@IARS	ENST00000627121.2	protein_coding	92293611,92289301,92288126,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92240643,92229001,92223346,92222520,92210211	92293756,92289426,92288282,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92240691,92229126,92223489,92222672,92210889	Gene ID= ENSG00000196305.17 TPM= 6.27 Transcript Type= protein_coding
chr9	92210345	92293734	92210345	92293734	-	transcript1668.chr9.nnic@IARS	transcript1668.chr9.nnic	protein_coding	92293611,92289301,92288126,92287791,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92229001,92223346,92222520,92210873,92210345	92293734,92289426,92288282,92287910,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92229126,92223489,92222672,92210889,92210871	Gene ID= ENSG00000196305.17 TPM= 6.92 Transcript Type= NA
chr9	92210345	92293694	92210345	92293694	-	ENST00000443024.6@IARS	ENST00000443024.6	protein_coding	92293611,92289301,92288126,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92229001,92223346,92222520,92210873,92210345	92293694,92289426,92288282,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92229126,92223489,92222672,92210889,92210871	Gene ID= ENSG00000196305.17 TPM= 103.29 Transcript Type= protein_coding
chr9	92210207	92293700	92210207	92293700	-	ENST00000375643.7@IARS	ENST00000375643.7	protein_coding	92293441,92289301,92288126,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92229001,92223346,92222520,92210207	92293700,92289426,92288282,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92229126,92223489,92222672,92210889	Gene ID= ENSG00000196305.17 TPM= 5.47 Transcript Type= protein_coding
chr9	92210345	92293695	92210345	92293695	-	ENST00000447699.6@IARS	ENST00000447699.6	protein_coding	92293611,92289301,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92229001,92223346,92222520,92210345	92293695,92289426,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92229126,92223489,92222672,92210889	Gene ID= ENSG00000196305.17 TPM= 28.64 Transcript Type= protein_coding
chr9	92297490	92325353	92297490	92325353	-	transcript1695.chr9.nic@NOL8	transcript1695.chr9.nic	protein_coding	92325180,92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297490	92325353,92324209,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886	Gene ID= ENSG00000198000.11 TPM= 1.93 Transcript Type= NA
chr9	92297358	92325556	92297358	92325556	-	ENST00000442668.6@NOL8	ENST00000442668.6	protein_coding	92325306,92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297358	92325556,92324209,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886	Gene ID= ENSG00000198000.11 TPM= 3.86 Transcript Type= protein_coding
chr9	92305775	92325371	92305775	92325371	-	transcript1705.chr9.nic@NOL8	transcript1705.chr9.nic	protein_coding	92325306,92324023,92323441,92321668,92319943,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305775	92325371,92324209,92323503,92321746,92320382,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830	Gene ID= ENSG00000198000.11 TPM= 3.86 Transcript Type= NA
chr9	92613184	92670265	92613184	92670265	-	ENST00000287996.7@IPPK	ENST00000287996.7	protein_coding	92669908,92658634,92656456,92652573,92649453,92648059,92642752,92640710,92638001,92635158,92634386,92619486,92613184	92670265,92658681,92656551,92652639,92649574,92648148,92642810,92640782,92638280,92635308,92634488,92619565,92616057	Gene ID= ENSG00000127080.9 TPM= 6.76 Transcript Type= protein_coding
chr9	92711363	92764812	92711363	92764812	-	ENST00000375512.3@BICD2	ENST00000375512.3	protein_coding	92764505,92729024,92722656,92720300,92718539,92717797,92715253,92711363	92764812,92729236,92722808,92720755,92719582,92717948,92715463,92713461	Gene ID= ENSG00000185963.13 TPM= 61.78 Transcript Type= protein_coding
chr9	92968609	92970724	92968609	92970724	-	transcript1736.chr9.nnic@NA	transcript1736.chr9.nnic	NA	92968609	92970724	Gene ID= novel_gene_chr9_1737 TPM= 1.93 Transcript Type= NA
chr9	93096211	93113283	93096211	93113283	+	transcript1746.chr9.nic@CARD19	transcript1746.chr9.nic	protein_coding	93096211,93107674,93110568,93112218,93112992	93096352,93107827,93110721,93112289,93113283	Gene ID= ENSG00000165233.17 TPM= 8.69 Transcript Type= NA
chr9	93096238	93113283	93096238	93113283	+	transcript1748.chr9.nnic@CARD19	transcript1748.chr9.nnic	protein_coding	93096238,93107674,93112218,93112992	93096352,93107827,93112289,93113283	Gene ID= ENSG00000165233.17 TPM= 3.86 Transcript Type= NA
chr9	93096218	93113282	93096218	93113282	+	ENST00000375464.6@CARD19	ENST00000375464.6	protein_coding	93096218,93107674,93110568,93111879,93112218,93112992	93096352,93107816,93110721,93111938,93112289,93113282	Gene ID= ENSG00000165233.17 TPM= 30.89 Transcript Type= protein_coding
chr9	93096218	93113282	93096218	93113282	+	ENST00000466409.1@CARD19	ENST00000466409.1	protein_coding	93096218,93107674,93110568,93112992	93096352,93107816,93112289,93113282	Gene ID= ENSG00000165233.17 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr9	93121489	93134288	93121489	93134288	-	ENST00000375446.4@NINJ1	ENST00000375446.4	protein_coding	93134143,93126410,93124899,93121489	93134288,93126638,93125062,93122230	Gene ID= ENSG00000131669.9 TPM= 60.81 Transcript Type= protein_coding
chr9	93446494	93451562	93446494	93451562	-	ENST00000423591.5@FAM120AOS	ENST00000423591.5	protein_coding	93451088,93450479,93446494	93451562,93450599,93447697	Gene ID= ENSG00000188938.15 TPM= 19.55 Transcript Type= protein_coding
chr9	93446494	93451566	93446494	93451566	-	transcript1780.chr9.nnic@FAM120AOS	transcript1780.chr9.nnic	protein_coding	93451001,93450479,93446494	93451566,93450599,93447697	Gene ID= ENSG00000188938.15 TPM= 3.14 Transcript Type= NA
chr9	93446494	93453592	93446494	93453592	-	ENST00000375412.9@FAM120AOS	ENST00000375412.9	protein_coding	93452147,93450479,93446494	93453592,93450599,93447697	Gene ID= ENSG00000188938.15 TPM= 1.21 Transcript Type= protein_coding
chr9	93446494	93451524	93446494	93451524	-	ENST00000479094.5@FAM120AOS	ENST00000479094.5	protein_coding	93450945,93450479,93446494	93451524,93450599,93447697	Gene ID= ENSG00000188938.15 TPM= 8.93 Transcript Type= processed_transcript
chr9	93451722	93566107	93451722	93566107	+	ENST00000277165.10@FAM120A	ENST00000277165.10	protein_coding	93451722,93471141,93476256,93497471,93498790,93515667,93515983,93527155,93529353,93532155,93543222,93550577,93556382,93557827,93558581,93561109,93562208,93564229	93452389,93471387,93476338,93497599,93498886,93515767,93516269,93527242,93529580,93532329,93543471,93550691,93556591,93558010,93558718,93561250,93562304,93566107	Gene ID= ENSG00000048828.16 TPM= 30.89 Transcript Type= protein_coding
chr9	93576407	93679587	93576407	93679587	+	ENST00000359246.8@PHF2	ENST00000359246.8	protein_coding	93576407,93629970,93636411,93645629,93649071,93653179,93654413,93655934,93656489,93658145,93659511,93660192,93662907,93663517,93665686,93665990,93667080,93673585,93674927,93675680,93676594,93677588	93576871,93630055,93636525,93645789,93649212,93653365,93654575,93656021,93656595,93658236,93659600,93660560,93663026,93663635,93665864,93666060,93667240,93673862,93675022,93675789,93676963,93679587	Gene ID= ENSG00000197724.10 TPM= 4.83 Transcript Type= protein_coding
chr9	94030794	94109856	94030794	94109856	+	ENST00000375360.7@PTPDC1	ENST00000375360.7	protein_coding	94030794,94064734,94085251,94087831,94088145,94095317,94097321,94101566,94104275,94107828	94031127,94064821,94085422,94087911,94088263,94095454,94098579,94101751,94104385,94109856	Gene ID= ENSG00000158079.14 TPM= 3.86 Transcript Type= protein_coding
chr9	94374569	94460911	94374569	94460911	+	transcript1798.chr9.nnic@MFSD14B	transcript1798.chr9.nnic	protein_coding	94374569,94415158,94429189,94438401,94440985,94444964,94446823,94451456,94453958,94458322,94459161	94374927,94415253,94429251,94438528,94441099,94445182,94446936,94451527,94454070,94458464,94460911	Gene ID= ENSG00000148110.15 TPM= 7.08 Transcript Type= NA
chr9	94374567	94460911	94374567	94460911	+	transcript1799.chr9.nnic@MFSD14B	transcript1799.chr9.nnic	protein_coding	94374567,94415158,94429189,94438401,94440985,94446823,94451456,94453958,94456240,94458322,94459161	94374927,94415253,94429251,94438528,94441099,94446936,94451527,94454070,94456337,94458464,94460911	Gene ID= ENSG00000148110.15 TPM= 8.04 Transcript Type= NA
chr9	94374569	94460911	94374569	94460911	+	transcript1800.chr9.nnic@MFSD14B	transcript1800.chr9.nnic	protein_coding	94374569,94415158,94429189,94438401,94444964,94446823,94451456,94453958,94456240,94458322,94459161	94374927,94415253,94429251,94438528,94445182,94446936,94451527,94454070,94456337,94458464,94460911	Gene ID= ENSG00000148110.15 TPM= 5.15 Transcript Type= NA
chr9	94374426	94416374	94374426	94416374	+	transcript1803.chr9.nic@MFSD14B	transcript1803.chr9.nic	protein_coding	94374426,94415158	94374927,94416374	Gene ID= ENSG00000148110.15 TPM= 1.93 Transcript Type= NA
chr9	94558720	94593793	94558720	94593793	-	ENST00000375337.3@FBP2	ENST00000375337.3	protein_coding	94593557,94587307,94584577,94571462,94567270,94563342,94558720	94593793,94587469,94584669,94571602,94567407,94563461,94559132	Gene ID= ENSG00000130957.4 TPM= 26.06 Transcript Type= protein_coding
chr9	94603133	94639507	94603133	94639507	-	ENST00000375326.8@FBP1	ENST00000375326.8	protein_coding	94639141,94620329,94617768,94609921,94606815,94605457,94603133	94639507,94620491,94617860,94610061,94606952,94605576,94603572	Gene ID= ENSG00000165140.9 TPM= 2.9 Transcript Type= protein_coding
chr9	95004948	95087159	95004948	95087159	+	transcript1816.chr9.nic@C9orf3	transcript1816.chr9.nic	protein_coding	95004948,95005158,95005542,95060694,95080694,95082575,95086682	95005065,95005220,95005616,95060810,95080780,95082719,95087159	Gene ID= ENSG00000148120.16 TPM= 16.25 Transcript Type= NA
chr9	95005223	95087156	95005223	95087156	+	transcript1832.chr9.nnic@C9orf3	transcript1832.chr9.nnic	protein_coding	95005223,95005542,95060694,95080694,95086682	95005383,95005616,95060810,95080780,95087156	Gene ID= ENSG00000148120.16 TPM= 10.94 Transcript Type= NA
chr9	95004996	95083035	95004996	95083035	+	ENST00000445181.5@C9orf3	ENST00000445181.5	protein_coding	95004996,95005158,95005542,95060694,95080694,95082575	95005065,95005220,95005616,95060810,95080780,95083035	Gene ID= ENSG00000148120.16 TPM= 1.45 Transcript Type= protein_coding
chr9	95507641	95509292	95507641	95509292	-	transcript1842.chr9.nnic@NA	transcript1842.chr9.nnic	NA	95507641	95509292	Gene ID= novel_gene_chr9_1843 TPM= 1.93 Transcript Type= NA
chr9	95875150	95875829	95875150	95875829	-	transcript1855.chr9.nnic@NA	transcript1855.chr9.nnic	NA	95875150	95875829	Gene ID= novel_gene_chr9_1856 TPM= 1.93 Transcript Type= NA
chr9	95875591	95972398	95875591	95972398	+	transcript1849.chr9.nic@ERCC6L2	transcript1849.chr9.nic	protein_coding	95875591,95880869,95897849,95907078,95915668,95916227,95921175,95922305,95923260,95928079,95928719,95941454,95955914,95966562,95970576,95971933	95876084,95881293,95897971,95907271,95915829,95916434,95921315,95922418,95923379,95928150,95928864,95941549,95956013,95966714,95970656,95972398	Gene ID= ENSG00000182150.15 TPM= 4.83 Transcript Type= NA
chr9	95875700	95972398	95875700	95972398	+	transcript1852.chr9.nnic@ERCC6L2	transcript1852.chr9.nnic	protein_coding	95875700,95880869,95897849,95907078,95915668,95916227,95921175,95922305,95923260,95928079,95928719,95941454,95955914,95970576,95971933	95876084,95881293,95897971,95907271,95915829,95916434,95921315,95922418,95923379,95928150,95928864,95941549,95956013,95970656,95972398	Gene ID= ENSG00000182150.15 TPM= 1.93 Transcript Type= NA
chr9	96320706	96383697	96320706	96383697	-	ENST00000253270.11@SLC35D2	ENST00000253270.11	protein_coding	96383477,96368272,96364464,96360154,96352038,96351103,96345299,96343904,96336717,96324091,96321998,96320706	96383697,96368305,96364550,96360221,96352109,96351171,96345401,96343996,96336784,96324169,96322080,96321341	Gene ID= ENSG00000130958.11 TPM= 1.93 Transcript Type= protein_coding
chr9	96385941	96418329	96385941	96418329	-	ENST00000375256.4@ZNF367	ENST00000375256.4	protein_coding	96417613,96398164,96394823,96392398,96385941	96418329,96398314,96394942,96392536,96388459	Gene ID= ENSG00000165244.6 TPM= 4.83 Transcript Type= protein_coding
chr9	96450166	96491336	96450166	96491336	+	transcript1871.chr9.nnic@HABP4	transcript1871.chr9.nnic	protein_coding	96450166,96458379,96465710,96471011,96484462,96488089,96489982	96450628,96458541,96465778,96471094,96484633,96488274,96491336	Gene ID= ENSG00000130956.13 TPM= 1.93 Transcript Type= NA
chr9	96450205	96491336	96450205	96491336	+	ENST00000375249.4@HABP4	ENST00000375249.4	protein_coding	96450205,96458379,96465337,96465710,96471011,96484462,96488089,96489982	96450628,96458541,96465498,96465778,96471094,96484633,96488274,96491336	Gene ID= ENSG00000130956.13 TPM= 7.72 Transcript Type= protein_coding
chr9	96514434	96619841	96514434	96619841	-	transcript1874.chr9.nic@CDC14B	transcript1874.chr9.nic	protein_coding	96619219,96565393,96564777,96562693,96551796,96541826,96539078,96534455,96533927,96523587,96523261,96522506,96515649,96514434	96619841,96565483,96564852,96562785,96551872,96541892,96539140,96534542,96534157,96523725,96523420,96522603,96515792,96514949	Gene ID= ENSG00000081377.16 TPM= 1.93 Transcript Type= NA
chr9	96637923	96655323	96637923	96655323	-	transcript1880.chr9.nnic@AAED1	transcript1880.chr9.nnic	protein_coding	96655090,96654705,96651659,96651390,96637923	96655323,96654773,96651712,96651495,96638978	Gene ID= ENSG00000158122.11 TPM= 1.93 Transcript Type= NA
chr9	96641251	96655323	96641251	96655323	-	transcript1881.chr9.nic@AAED1	transcript1881.chr9.nic	protein_coding	96655090,96654705,96651659,96651390,96641251	96655323,96654773,96651712,96651495,96641886	Gene ID= ENSG00000158122.11 TPM= 6.76 Transcript Type= NA
chr9	96639577	96655281	96639577	96655281	-	ENST00000375234.7@AAED1	ENST00000375234.7	protein_coding	96655090,96654705,96651659,96651390,96645893,96639577	96655281,96654773,96651712,96651495,96646024,96641886	Gene ID= ENSG00000158122.11 TPM= 18.34 Transcript Type= protein_coding
chr9	96942913	97013600	96942913	97013600	-	ENST00000637864.1@MFSD14C	ENST00000637864.1	protein_coding	97013259,96972853,96958835,96949555,96942913	97013600,96972948,96958897,96949682,96944085	Gene ID= ENSG00000196312.12 TPM= 1.93 Transcript Type= protein_coding
chr9	97411950	97496125	97411950	97496125	+	ENST00000355295.4@TDRD7	ENST00000355295.4	protein_coding	97411950,97428460,97430933,97432025,97439245,97441658,97460178,97464842,97470558,97472293,97473492,97475383,97478439,97480828,97482849,97487172,97495663	97412238,97428672,97431074,97432238,97439318,97441875,97460764,97465028,97470669,97472495,97473626,97475469,97478573,97480938,97483351,97487332,97496125	Gene ID= ENSG00000196116.7 TPM= 2.41 Transcript Type= protein_coding
chr9	97412102	97496125	97412102	97496125	+	transcript1898.chr9.nnic@TDRD7	transcript1898.chr9.nnic	protein_coding	97412102,97430933,97432025,97439245,97441658,97460178,97464842,97470558,97472293,97473492,97475383,97478439,97480828,97482849,97487172,97495663	97412238,97431074,97432238,97439318,97441875,97460764,97465028,97470669,97472495,97473626,97475469,97478573,97480938,97483351,97487332,97496125	Gene ID= ENSG00000196116.7 TPM= 5.31 Transcript Type= NA
chr9	97501672	97600157	97501672	97600157	+	transcript1917.chr9.nnic@TMOD1	transcript1917.chr9.nnic	protein_coding	97501672,97524141,97546185,97547249,97553281,97562732,97564038,97565848,97568894,97591291,97599634	97501803,97524308,97546341,97547371,97553400,97562821,97564168,97565955,97569037,97591435,97600157	Gene ID= ENSG00000136842.13 TPM= 20.75 Transcript Type= NA
chr9	97501639	97601748	97501639	97601748	+	ENST00000259365.8@TMOD1	ENST00000259365.8	protein_coding	97501639,97524141,97546185,97553281,97562732,97564038,97565848,97568894,97591291,97599634	97501803,97524308,97546341,97553400,97562821,97564168,97565955,97569037,97591435,97601748	Gene ID= ENSG00000136842.13 TPM= 44.4 Transcript Type= protein_coding
chr9	97600083	97633460	97600083	97633460	-	transcript1934.chr9.nnic@TSTD2	transcript1934.chr9.nnic	protein_coding	97633243,97627398,97625681,97617757,97611574,97610346,97606143,97605483,97604727,97600083	97633460,97627612,97625969,97617877,97611699,97610451,97606261,97605641,97604865,97602767	Gene ID= ENSG00000136925.14 TPM= 5.15 Transcript Type= NA
chr9	97600083	97633398	97600083	97633398	-	transcript1943.chr9.nnic@TSTD2	transcript1943.chr9.nnic	protein_coding	97633243,97627398,97625681,97611574,97610346,97606143,97605483,97604727,97600083	97633398,97627612,97625969,97611699,97610451,97606261,97605641,97604865,97602767	Gene ID= ENSG00000136925.14 TPM= 5.15 Transcript Type= NA
chr9	97600083	97633575	97600083	97633575	-	ENST00000341170.4@TSTD2	ENST00000341170.4	protein_coding	97633243,97627398,97625681,97617757,97611574,97610346,97606143,97605483,97604727,97600083	97633575,97627612,97625997,97617877,97611699,97610451,97606261,97605641,97604865,97602767	Gene ID= ENSG00000136925.14 TPM= 25.42 Transcript Type= protein_coding
chr9	97633646	97672786	97633646	97672786	+	transcript1903.chr9.nnic@NCBP1	transcript1903.chr9.nnic	protein_coding	97633646,97640794,97641562,97643204,97645117,97645611,97647492,97648008,97650503,97651310,97653798,97654880,97655702,97656011,97658640,97660946,97662042,97662954,97664340,97666763,97668846,97669593,97671086,97672668	97633915,97640882,97641662,97643360,97645224,97645732,97647561,97648223,97650600,97651373,97653908,97654944,97655764,97656085,97658743,97661068,97662144,97663047,97664443,97666877,97668974,97669706,97671223,97672786	Gene ID= ENSG00000136937.12 TPM= 1.93 Transcript Type= NA
chr9	97633821	97671629	97633821	97671629	+	transcript1914.chr9.nnic@NCBP1	transcript1914.chr9.nnic	protein_coding	97633821,97640794,97641562,97643204,97645117,97645611,97647492,97648008,97650503,97651310,97653798,97654880,97655702,97656011,97658640,97660946,97662042,97662954,97664340,97666763,97668846,97669593,97671086	97633915,97640882,97641691,97643360,97645224,97645732,97647561,97648223,97650600,97651373,97653908,97654944,97655764,97656085,97658743,97661068,97662144,97663047,97664443,97666877,97668974,97669706,97671629	Gene ID= ENSG00000136937.12 TPM= 5.79 Transcript Type= NA
chr9	97633626	97673748	97633626	97673748	+	ENST00000375147.7@NCBP1	ENST00000375147.7	protein_coding	97633626,97640794,97641562,97643204,97645117,97645611,97647492,97648008,97650503,97651310,97653798,97654880,97655702,97656011,97658640,97660946,97662042,97662954,97664340,97666763,97668846,97669593,97671086	97633915,97640882,97641662,97643360,97645224,97645732,97647561,97648223,97650600,97651373,97653908,97654944,97655764,97656085,97658743,97661068,97662144,97663047,97664443,97666877,97668974,97669706,97673748	Gene ID= ENSG00000136937.12 TPM= 3.86 Transcript Type= protein_coding
chr9	97674909	97697357	97674909	97697357	-	ENST00000375128.4@XPA	ENST00000375128.4	protein_coding	97697121,97693649,97689534,97687096,97684923,97674909	97697357,97693759,97689639,97687261,97685040,97675587	Gene ID= ENSG00000136936.10 TPM= 11.58 Transcript Type= protein_coding
chr9	97904489	97922570	97904489	97922570	-	ENST00000375119.7@TRMO	ENST00000375119.7	protein_coding	97922418,97916164,97913401,97909960,97904489	97922570,97916338,97913558,97910616,97904992	Gene ID= ENSG00000136932.13 TPM= 2.9 Transcript Type= protein_coding
chr9	97983361	98015943	97983361	98015943	+	ENST00000339399.4@ANP32B	ENST00000339399.4	protein_coding	97983361,97994631,97998556,98004964,98011271,98012421,98015364	97983609,97994780,97998678,98005153,98011389,98012472,98015943	Gene ID= ENSG00000136938.8 TPM= 20.27 Transcript Type= protein_coding
chr9	98056739	98083075	98056739	98083075	+	ENST00000210444.5@NANS	ENST00000210444.5	protein_coding	98056739,98060782,98076918,98078193,98080816,98082846	98056940,98060997,98077017,98078347,98081082,98083075	Gene ID= ENSG00000095380.10 TPM= 54.06 Transcript Type= protein_coding
chr9	98216709	98256322	98216709	98256322	-	transcript1985.chr9.nnic@TBC1D2	transcript1985.chr9.nnic	protein_coding	98255173,98251785,98243994,98233416,98228952,98220833,98216709	98256322,98251926,98244129,98233549,98229148,98221228,98217197	Gene ID= ENSG00000095383.19 TPM= 1.93 Transcript Type= NA
chr9	98198999	98255721	98198999	98255721	-	ENST00000465784.6@TBC1D2	ENST00000465784.6	protein_coding	98255173,98251785,98243994,98233416,98228952,98220833,98213108,98210656,98208668,98203288,98201479,98200253,98198999	98255721,98251926,98244129,98233549,98229148,98221228,98213218,98210843,98209144,98203408,98201664,98200374,98199588	Gene ID= ENSG00000095383.19 TPM= 2.9 Transcript Type= protein_coding
chr9	99105089	99154192	99105089	99154192	+	ENST00000374994.8@TGFBR1	ENST00000374994.8	protein_coding	99105089,99128855,99132509,99137859,99142536,99144732,99146485,99147654,99149180	99105302,99129100,99132739,99138089,99142703,99144888,99146609,99147784,99154192	Gene ID= ENSG00000106799.12 TPM= 3.54 Transcript Type= protein_coding
chr9	99105142	99153649	99105142	99153649	+	transcript2006.chr9.nnic@TGFBR1	transcript2006.chr9.nnic	protein_coding	99105142,99137859,99142536,99144732,99146485,99147654,99149180	99105302,99138089,99142703,99144888,99146609,99147784,99153649	Gene ID= ENSG00000106799.12 TPM= 2.58 Transcript Type= NA
chr9	99105150	99153658	99105150	99153658	+	ENST00000552516.5@TGFBR1	ENST00000552516.5	protein_coding	99105150,99128855,99132497,99137859,99142536,99144732,99146485,99147654,99149180	99105302,99129100,99132739,99138089,99142703,99144888,99146609,99147784,99153658	Gene ID= ENSG00000106799.12 TPM= 12.23 Transcript Type= protein_coding
chr9	99217367	99221956	99217367	99221956	-	ENST00000476832.1@ALG2	ENST00000476832.1	protein_coding	99221547,99217367	99221956,99218836	Gene ID= ENSG00000119523.9 TPM= 14.48 Transcript Type= protein_coding
chr9	99222301	99230615	99222301	99230615	+	ENST00000223641.4@SEC61B	ENST00000223641.4	protein_coding	99222301,99222546,99227899,99230337	99222366,99222643,99228000,99230615	Gene ID= ENSG00000106803.9 TPM= 39.58 Transcript Type= protein_coding
chr9	99358925	99363194	99358925	99363194	+	transcript2013.chr9.nnic@NA	transcript2013.chr9.nnic	NA	99358925,99359459,99361371,99362720	99359133,99359637,99361500,99363194	Gene ID= novel_gene_chr9_2014 TPM= 1.93 Transcript Type= NA
chr9	99906633	99970341	99906633	99970341	+	ENST00000259400.10@STX17	ENST00000259400.10	protein_coding	99906633,99915178,99928778,99951060,99959917,99960105,99967653,99968434	99906706,99915362,99928843,99951285,99960032,99960155,99967739,99970341	Gene ID= ENSG00000136874.10 TPM= 5.79 Transcript Type= protein_coding
chr9	99906721	99969487	99906721	99969487	+	transcript2026.chr9.nic@STX17	transcript2026.chr9.nic	protein_coding	99906721,99915178,99928778,99951060,99959917,99960105,99967653,99968434	99907098,99915362,99928843,99951285,99960032,99960155,99967739,99969487	Gene ID= ENSG00000136874.10 TPM= 2.9 Transcript Type= NA
chr9	99970752	99973224	99970752	99973224	+	transcript2029.chr9.nnic@NA	transcript2029.chr9.nnic	NA	99970752	99973224	Gene ID= novel_gene_chr9_2030 TPM= 1.93 Transcript Type= NA
chr9	100099241	100129536	100099241	100129536	+	transcript2061.chr9.nic@INVS	transcript2061.chr9.nic	protein_coding	100099241,100104498,100126383	100099416,100104627,100129536	Gene ID= ENSG00000119509.12 TPM= 1.93 Transcript Type= NA
chr9	100099275	100300788	100099275	100300788	+	ENST00000262456.6@INVS	ENST00000262456.6	protein_coding	100099275,100104498,100126383,100226062,100229660,100240060,100242570,100246616,100252283,100252907,100264822,100272864,100284320,100292326,100292947,100296917,100297936,100300568	100099416,100104627,100126549,100226235,100229827,100240240,100242679,100246787,100252438,100253136,100264928,100273076,100284603,100292436,100293043,100297146,100298010,100300788	Gene ID= ENSG00000119509.12 TPM= 1.93 Transcript Type= protein_coding
chr9	100302084	100352971	100302084	100352971	-	transcript2051.chr9.nic@TEX10	transcript2051.chr9.nic	protein_coding	100352772,100349184,100347167,100346072,100340257,100329931,100329140,100327787,100326302,100321683,100320265,100310299,100308500,100303632,100302084	100352971,100349372,100347406,100346315,100340369,100330169,100329275,100327962,100326479,100321771,100320398,100310379,100308681,100303842,100302304	Gene ID= ENSG00000136891.13 TPM= 3.86 Transcript Type= NA
chr9	100302084	100352971	100302084	100352971	-	transcript2054.chr9.nnic@TEX10	transcript2054.chr9.nnic	protein_coding	100352772,100349184,100346694,100346072,100340257,100327787,100326302,100321683,100320265,100310299,100308500,100303632,100302084	100352971,100349372,100347406,100346315,100340369,100327962,100326479,100321771,100320398,100310379,100308681,100303842,100302304	Gene ID= ENSG00000136891.13 TPM= 1.93 Transcript Type= NA
chr9	100302084	100352939	100302084	100352939	-	transcript2057.chr9.nnic@TEX10	transcript2057.chr9.nnic	protein_coding	100352772,100346072,100340257,100327787,100326302,100321733,100308500,100303632,100302084	100352939,100346315,100340369,100327962,100326479,100321771,100308633,100303842,100302304	Gene ID= ENSG00000136891.13 TPM= 2.9 Transcript Type= NA
chr9	100302084	100352939	100302084	100352939	-	ENST00000374902.8@TEX10	ENST00000374902.8	protein_coding	100352772,100349184,100346694,100346072,100340257,100329931,100329140,100327787,100326302,100321683,100320265,100310299,100308500,100303632,100302084	100352939,100349372,100347406,100346315,100340369,100330169,100329275,100327962,100326479,100321771,100320398,100310379,100308681,100303842,100302304	Gene ID= ENSG00000136891.13 TPM= 25.1 Transcript Type= protein_coding
chr9	100427238	100451229	100427238	100451229	+	transcript2067.chr9.nnic@MSANTD3	transcript2067.chr9.nnic	protein_coding	100427238,100441906,100444128,100445169,100450557	100427393,100442356,100444188,100445237,100451229	Gene ID= ENSG00000066697.14 TPM= 1.93 Transcript Type= NA
chr9	100427429	100451711	100427429	100451711	+	ENST00000622639.4@MSANTD3	ENST00000622639.4	protein_coding	100427429,100441906,100450557	100427570,100442356,100451711	Gene ID= ENSG00000066697.14 TPM= 1.93 Transcript Type= protein_coding
chr9	100427156	100451229	100427156	100451229	+	ENST00000395067.6@MSANTD3	ENST00000395067.6	protein_coding	100427156,100441906,100450557	100427393,100442356,100451229	Gene ID= ENSG00000066697.14 TPM= 9.65 Transcript Type= protein_coding
chr9	100578079	100587906	100578079	100587906	+	ENST00000307584.5@CAVIN4	ENST00000307584.5	protein_coding	100578079,100585765	100578551,100587906	Gene ID= ENSG00000170681.6 TPM= 122.59 Transcript Type= protein_coding
chr9	101387633	101398614	101387633	101398614	-	ENST00000374865.4@MRPL50	ENST00000374865.4	protein_coding	101398501,101387633	101398614,101390850	Gene ID= ENSG00000136897.7 TPM= 11.58 Transcript Type= protein_coding
chr9	101533844	101563344	101533844	101563344	+	transcript2097.chr9.nnic@RNF20	transcript2097.chr9.nnic	protein_coding	101533844,101535398,101540203,101540490,101540842,101544767,101546820,101547137,101547399,101550606,101551684,101552141,101552383,101553988,101554694,101557384,101560801,101561090,101561910,101562246	101533914,101535552,101540370,101540637,101540975,101544885,101546966,101547214,101547518,101550785,101551819,101552262,101552753,101554105,101554843,101557596,101560926,101561230,101562011,101563344	Gene ID= ENSG00000155827.11 TPM= 3.86 Transcript Type= NA
chr9	101533844	101554724	101533844	101554724	+	transcript2100.chr9.nic@RNF20	transcript2100.chr9.nic	protein_coding	101533844,101535398,101540203,101540490,101540793,101544767,101546820,101547137,101547399,101550606,101551684,101552141,101552383,101553988,101554694	101533914,101535552,101540370,101540637,101540975,101544885,101546966,101547214,101547518,101550785,101551819,101552262,101552753,101554105,101554724	Gene ID= ENSG00000155827.11 TPM= 1.93 Transcript Type= NA
chr9	101533851	101563344	101533851	101563344	+	ENST00000389120.7@RNF20	ENST00000389120.7	protein_coding	101533851,101535398,101540203,101540490,101540793,101544767,101546820,101547137,101547399,101550606,101551684,101552141,101552383,101553988,101554694,101557384,101560801,101561090,101561910,101562246	101533914,101535552,101540370,101540637,101540975,101544885,101546966,101547214,101547518,101550785,101551819,101552262,101552753,101554105,101554843,101557596,101560926,101561230,101562011,101563344	Gene ID= ENSG00000155827.11 TPM= 53.09 Transcript Type= protein_coding
chr9	104747683	104760119	104747683	104760119	+	transcript2108.chr9.nic@NIPSNAP3A	transcript2108.chr9.nic	protein_coding	104747683,104750956,104752906,104754551,104759085	104747852,104751166,104753064,104754700,104760119	Gene ID= ENSG00000136783.9 TPM= 2.9 Transcript Type= NA
chr9	104747688	104760122	104747688	104760122	+	ENST00000374767.4@NIPSNAP3A	ENST00000374767.4	protein_coding	104747688,104750956,104752906,104754551,104759085,104759262	104747852,104751166,104753064,104754700,104759171,104760122	Gene ID= ENSG00000136783.9 TPM= 4.83 Transcript Type= protein_coding
chr9	104764170	104774010	104764170	104774010	+	ENST00000374762.3@NIPSNAP3B	ENST00000374762.3	protein_coding	104764170,104766325,104768863,104770849,104772822,104772997	104764300,104766535,104769021,104770998,104772908,104774010	Gene ID= ENSG00000165028.11 TPM= 6.76 Transcript Type= protein_coding
chr9	104921945	104926481	104921945	104926481	+	transcript2114.chr9.nnic@NA	transcript2114.chr9.nnic	NA	104921945	104926481	Gene ID= novel_gene_chr9_2115 TPM= 5.79 Transcript Type= NA
chr9	105448034	105552433	105448034	105552433	+	ENST00000374710.7@FSD1L	ENST00000374710.7	protein_coding	105448034,105464236,105468193,105471904,105479354,105484381,105506399,105508617,105512807,105513599,105534496,105535067,105539263,105546358	105448235,105464331,105468324,105472005,105479376,105484502,105506608,105508715,105512936,105513631,105534593,105535318,105539351,105552433	Gene ID= ENSG00000106701.11 TPM= 1.93 Transcript Type= protein_coding
chr9	105656243	105663115	105656243	105663115	+	transcript2128.chr9.nnic@AL158070.2	transcript2128.chr9.nnic	TEC	105656243,105662487	105656312,105663115	Gene ID= ENSG00000279609.1 TPM= 1.93 Transcript Type= NA
chr9	105694197	105695198	105694197	105695198	-	transcript2180.chr9.nnic@NA	transcript2180.chr9.nnic	NA	105694197	105695198	Gene ID= novel_gene_chr9_2181 TPM= 4.83 Transcript Type= NA
chr9	105694343	105775816	105694343	105775816	+	transcript2140.chr9.nnic@TMEM38B	transcript2140.chr9.nnic	protein_coding	105694343,105705597,105721537,105722534,105744612,105748073,105773865	105694772,105705753,105721721,105722621,105744639,105748190,105775816	Gene ID= ENSG00000095209.11 TPM= 19.72 Transcript Type= NA
chr9	105694543	105775812	105694543	105775812	+	transcript2145.chr9.nic@TMEM38B	transcript2145.chr9.nic	protein_coding	105694543,105705597,105721537,105722534,105748073,105749073,105773865	105694772,105705753,105721721,105722621,105748190,105749111,105775812	Gene ID= ENSG00000095209.11 TPM= 6.21 Transcript Type= NA
chr9	105694554	105775816	105694554	105775816	+	transcript2162.chr9.nnic@TMEM38B	transcript2162.chr9.nnic	protein_coding	105694554,105705597,105722534,105748073,105773865	105694772,105705753,105722621,105748190,105775816	Gene ID= ENSG00000095209.11 TPM= 7.17 Transcript Type= NA
chr9	105694542	105708265	105694542	105708265	+	transcript2171.chr9.nnic@TMEM38B	transcript2171.chr9.nnic	protein_coding	105694542,105705597,105706847	105694772,105705753,105708265	Gene ID= ENSG00000095209.11 TPM= 5.79 Transcript Type= NA
chr9	107283264	107302114	107283264	107302114	+	transcript2189.chr9.nic@RAD23B	transcript2189.chr9.nic	protein_coding	107283264,107300141,107302035	107283695,107300222,107302114	Gene ID= ENSG00000119318.12 TPM= 3.86 Transcript Type= NA
chr9	107330226	107330445	107330226	107330445	+	transcript2191.chr9.nnic@NA	transcript2191.chr9.nnic	NA	107330226	107330445	Gene ID= novel_gene_chr9_2192 TPM= 1.93 Transcript Type= NA
chr9	107330500	107331038	107330500	107331038	+	transcript2193.chr9.nnic@NA	transcript2193.chr9.nnic	NA	107330500	107331038	Gene ID= novel_gene_chr9_2194 TPM= 2.9 Transcript Type= NA
chr9	108934181	108940968	108934181	108940968	+	ENST00000322940.10@FAM206A	ENST00000322940.10	protein_coding	108934181,108935638,108936308,108939196,108939385,108939549	108934565,108935689,108936437,108939272,108939454,108940968	Gene ID= ENSG00000119328.11 TPM= 25.1 Transcript Type= protein_coding
chr9	108934439	108940968	108934439	108940968	+	transcript2216.chr9.nnic@FAM206A	transcript2216.chr9.nnic	protein_coding	108934439,108935638,108939196,108939385,108939549	108934565,108935689,108939272,108939454,108940968	Gene ID= ENSG00000119328.11 TPM= 4.83 Transcript Type= NA
chr9	108942579	109013543	108942579	109013543	-	transcript2208.chr9.nnic@CTNNAL1	transcript2208.chr9.nnic	protein_coding	109013302,108992632,108990726,108984347,108983145,108979281,108976962,108972675,108970402,108965378,108955790,108952444,108952209,108948186,108943962,108943703,108942961,108942579	109013543,108992819,108990845,108984436,108983315,108979481,108977048,108972833,108970494,108965528,108955827,108952494,108952363,108948234,108944018,108943816,108943044,108942834	Gene ID= ENSG00000119326.14 TPM= 3.86 Transcript Type= NA
chr9	108990725	109013550	108990725	109013550	-	transcript2219.chr9.nic@CTNNAL1	transcript2219.chr9.nic	protein_coding	109013302,108999067,108992632,108990725	109013550,108999256,108992819,108990845	Gene ID= ENSG00000119326.14 TPM= 8.69 Transcript Type= NA
chr9	108942571	109013529	108942571	109013529	-	ENST00000325551.8@CTNNAL1	ENST00000325551.8	protein_coding	109013302,108999067,108992632,108990726,108984347,108983145,108979281,108976962,108972675,108970402,108965378,108955790,108952444,108952209,108948186,108943962,108943703,108942961,108942571	109013529,108999256,108992819,108990845,108984436,108983315,108979481,108977048,108972833,108970494,108965528,108955827,108952494,108952363,108948234,108944018,108943816,108943044,108942834	Gene ID= ENSG00000119326.14 TPM= 70.47 Transcript Type= protein_coding
chr9	109018926	109119987	109018926	109119987	-	transcript2224.chr9.nnic@TMEM245	transcript2224.chr9.nnic	protein_coding	109119335,109108453,109106508,109090922,109087173,109085997,109080839,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109018926	109119987,109108570,109106609,109091155,109087342,109086020,109080943,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 22.85 Transcript Type= NA
chr9	109018926	109119987	109018926	109119987	-	transcript2228.chr9.nnic@TMEM245	transcript2228.chr9.nnic	protein_coding	109119335,109108453,109106508,109090922,109087173,109085997,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109018926	109119987,109108570,109106609,109091155,109087342,109086020,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 1.93 Transcript Type= NA
chr9	109018926	109119987	109018926	109119987	-	transcript2229.chr9.nnic@TMEM245	transcript2229.chr9.nnic	protein_coding	109119335,109108453,109106508,109093475,109090922,109087173,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109018926	109119987,109108570,109106609,109093591,109091155,109087342,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 2.9 Transcript Type= NA
chr9	109019904	109119927	109019904	109119927	-	transcript2231.chr9.nnic@TMEM245	transcript2231.chr9.nnic	protein_coding	109119335,109108453,109106508,109090922,109087173,109085997,109080839,109073356,109064477,109060354,109057191,109050570,109050283,109036206,109033307,109019904	109119927,109108570,109106609,109091155,109087342,109086020,109080943,109073438,109064567,109060452,109057322,109050692,109050428,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 2.25 Transcript Type= NA
chr9	109018926	109119931	109018926	109119931	-	transcript2234.chr9.nnic@TMEM245	transcript2234.chr9.nnic	protein_coding	109119335,109108453,109106508,109090911,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109018926	109119931,109108570,109106609,109091155,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 1.93 Transcript Type= NA
chr9	109018926	109119987	109018926	109119987	-	transcript2236.chr9.nnic@TMEM245	transcript2236.chr9.nnic	protein_coding	109119335,109108453,109106508,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109018926	109119987,109108570,109106609,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 4.83 Transcript Type= NA
chr9	109015152	109119945	109015152	109119945	-	ENST00000374586.7@TMEM245	ENST00000374586.7	protein_coding	109119335,109108453,109106508,109093475,109090922,109087173,109085997,109080839,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109015152	109119945,109108570,109106609,109093591,109091155,109087342,109086020,109080943,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 9.01 Transcript Type= protein_coding
chr9	109378241	109498327	109378241	109498327	-	transcript2249.chr9.nnic@PTPN3	transcript2249.chr9.nnic	protein_coding	109498219,109463297,109457292,109457173,109448811,109445240,109438114,109436883,109433073,109428621,109426950,109422718,109420424,109410229,109409999,109408321,109406462,109404448,109391471,109391138,109389233,109383423,109382302,109381652,109378241	109498327,109463451,109457399,109457215,109448855,109445292,109438234,109436970,109433161,109428684,109427122,109422852,109420600,109410415,109410076,109408377,109406618,109404608,109391561,109391199,109389379,109383551,109382447,109381787,109379633	Gene ID= ENSG00000070159.13 TPM= 10.38 Transcript Type= NA
chr9	109378241	109498327	109378241	109498327	-	transcript2251.chr9.nic@PTPN3	transcript2251.chr9.nic	protein_coding	109498219,109463297,109457292,109457173,109454496,109448811,109445240,109438114,109436883,109433073,109428621,109426950,109420424,109410229,109409999,109408321,109406462,109404448,109391471,109391138,109389233,109383423,109382302,109381652,109378241	109498327,109463451,109457399,109457215,109454574,109448855,109445292,109438234,109436970,109433161,109428684,109427122,109420600,109410415,109410076,109408377,109406618,109404608,109391561,109391199,109389379,109383551,109382447,109381787,109379633	Gene ID= ENSG00000070159.13 TPM= 11.83 Transcript Type= NA
chr9	109378241	109498327	109378241	109498327	-	transcript2252.chr9.nnic@PTPN3	transcript2252.chr9.nnic	protein_coding	109498219,109463297,109457292,109457173,109448811,109445240,109438114,109436883,109433073,109428621,109426950,109420424,109410229,109409999,109408321,109406462,109404448,109391471,109391138,109389233,109383423,109382302,109381652,109378241	109498327,109463451,109457399,109457215,109448855,109445292,109438234,109436970,109433161,109428684,109427122,109420600,109410415,109410076,109408377,109406618,109404608,109391561,109391199,109389379,109383551,109382447,109381787,109379633	Gene ID= ENSG00000070159.13 TPM= 9.89 Transcript Type= NA
chr9	109378241	109421592	109378241	109421592	-	transcript2255.chr9.nnic@PTPN3	transcript2255.chr9.nnic	protein_coding	109421234,109420424,109410229,109409999,109408321,109406462,109404448,109391471,109391138,109389233,109383423,109382302,109381652,109378241	109421592,109420600,109410415,109410076,109408377,109406618,109404608,109391561,109391199,109389379,109383551,109382447,109381787,109379633	Gene ID= ENSG00000070159.13 TPM= 31.61 Transcript Type= NA
chr9	109497764	109499057	109497764	109499057	+	transcript2258.chr9.nnic@NA	transcript2258.chr9.nnic	NA	109497764	109499057	Gene ID= novel_gene_chr9_2259 TPM= 1.93 Transcript Type= NA
chr9	110048696	110172512	110048696	110172512	+	ENST00000374525.5@AKAP2	ENST00000374525.5	protein_coding	110048696,110136127,110156319,110168399	110048855,110138539,110156497,110172512	Gene ID= ENSG00000241978.9 TPM= 7.24 Transcript Type= protein_coding
chr9	110048696	110170219	110048696	110170219	+	transcript2265.chr9.nic@AKAP2	transcript2265.chr9.nic	protein_coding	110048696,110136127,110168399	110048855,110138539,110170219	Gene ID= ENSG00000241978.9 TPM= 5.31 Transcript Type= NA
chr9	110243811	110256640	110243811	110256640	-	ENST00000374517.5@TXN	ENST00000374517.5	protein_coding	110256412,110251358,110250820,110244778,110243811	110256640,110251462,110250879,110244843,110244219	Gene ID= ENSG00000136810.12 TPM= 40.54 Transcript Type= protein_coding
chr9	110873263	111038442	110873263	111038442	-	transcript2272.chr9.nic@LPAR1	transcript2272.chr9.nic	protein_coding	111038167,110973481,110972073,110941421,110873263	111038442,110973558,110972220,110942168,110875722	Gene ID= ENSG00000198121.13 TPM= 2.9 Transcript Type= NA
chr9	110873263	111038043	110873263	111038043	-	ENST00000374431.7@LPAR1	ENST00000374431.7	protein_coding	111037841,110973481,110972073,110941421,110873263	111038043,110973558,110972220,110942168,110875722	Gene ID= ENSG00000198121.13 TPM= 2.9 Transcript Type= protein_coding
chr9	111361891	111483881	111361891	111483881	-	transcript2278.chr9.nnic@KIAA0368	transcript2278.chr9.nnic	protein_coding	111483504,111472897,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111361891	111483881,111473000,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 30.55 Transcript Type= NA
chr9	111361891	111483943	111361891	111483943	-	transcript2286.chr9.nic@KIAA0368	transcript2286.chr9.nic	protein_coding	111483504,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111361891	111483943,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 109.79 Transcript Type= NA
chr9	111360693	111484745	111360693	111484745	-	ENST00000259335.8@KIAA0368	ENST00000259335.8	protein_coding	111484662,111484354,111483985,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111360693	111484745,111484548,111484261,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 4.09 Transcript Type= protein_coding
chr9	111360692	111484357	111360692	111484357	-	ENST00000338205.9@KIAA0368	ENST00000338205.9	protein_coding	111484116,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111360692	111484357,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 6.02 Transcript Type= protein_coding
chr9	111411141	111415714	111411141	111415714	+	transcript2309.chr9.nnic@NA	transcript2309.chr9.nnic	NA	111411141	111415714	Gene ID= novel_gene_chr9_2310 TPM= 1.93 Transcript Type= NA
chr9	111562967	111599407	111562967	111599407	-	ENST00000309195.9@PTGR1	ENST00000309195.9	protein_coding	111599339,111597317,111594222,111592926,111585998,111583472,111578796,111574734,111570091,111562967	111599407,111597432,111594267,111592982,111586165,111583589,111578951,111574842,111570209,111563231	Gene ID= ENSG00000106853.18 TPM= 1.93 Transcript Type= protein_coding
chr9	111631352	111654351	111631352	111654351	+	ENST00000313525.3@DNAJC25	ENST00000313525.3	protein_coding	111631352,111647107,111649453,111653100	111631743,111647259,111649923,111654351	Gene ID= ENSG00000059769.19 TPM= 7.72 Transcript Type= protein_coding
chr9	111631360	111654351	111631360	111654351	+	ENST00000447096.1@DNAJC25	ENST00000447096.1	protein_coding	111631360,111642857,111647107,111649453,111653100	111631743,111643094,111647259,111649923,111654351	Gene ID= ENSG00000059769.19 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr9	111661335	111670246	111661335	111670246	+	ENST00000374293.4@GNG10	ENST00000374293.4	protein_coding	111661335,111666815,111669269	111661715,111666946,111670246	Gene ID= ENSG00000242616.3 TPM= 23.17 Transcript Type= protein_coding
chr9	111896766	111935369	111896766	111935369	+	ENST00000374279.3@UGCG	ENST00000374279.3	protein_coding	111896766,111914605,111922849,111924777,111926384,111929500,111931271,111932170,111932827	111897313,111914746,111922951,111924878,111926496,111929678,111931357,111932359,111935369	Gene ID= ENSG00000148154.9 TPM= 18.34 Transcript Type= protein_coding
chr9	112380078	112475501	112380078	112475501	+	transcript2335.chr9.nnic@HSDL2	transcript2335.chr9.nnic	protein_coding	112380078,112403995,112405624,112408907,112416841,112418860,112438431,112441699,112454013,112459449,112470432,112475305	112380180,112404158,112405722,112409021,112416944,112418958,112438625,112441770,112454162,112459577,112473683,112475501	Gene ID= ENSG00000119471.14 TPM= 6.76 Transcript Type= NA
chr9	112379937	112472410	112379937	112472410	+	ENST00000398805.7@HSDL2	ENST00000398805.7	protein_coding	112379937,112403995,112405624,112408907,112416841,112418860,112438431,112441699,112454013,112459449,112470432	112380180,112404158,112405722,112409021,112416944,112418958,112438625,112441770,112454162,112459577,112472410	Gene ID= ENSG00000119471.14 TPM= 114.13 Transcript Type= protein_coding
chr9	112380080	112472405	112380080	112472405	+	ENST00000398803.1@HSDL2	ENST00000398803.1	protein_coding	112380080,112403995,112405624,112418860,112438431,112441699,112454013,112459449,112470432	112380180,112404158,112405722,112418958,112438625,112441770,112454162,112459577,112472405	Gene ID= ENSG00000119471.14 TPM= 4.57 Transcript Type= protein_coding
chr9	112683926	112718236	112683926	112718236	-	ENST00000374242.8@INIP	ENST00000374242.8	protein_coding	112717987,112716461,112694131,112689527,112683926	112718236,112716541,112694233,112689617,112687633	Gene ID= ENSG00000148153.13 TPM= 1.93 Transcript Type= protein_coding
chr9	113150942	113164137	113150942	113164137	+	ENST00000259392.7@SLC31A2	ENST00000259392.7	protein_coding	113150942,113157727,113161509,113162749	113151080,113157793,113161698,113164137	Gene ID= ENSG00000136867.10 TPM= 42.47 Transcript Type= protein_coding
chr9	113153121	113156418	113153121	113156418	-	transcript2372.chr9.nnic@NA	transcript2372.chr9.nnic	NA	113153121	113156418	Gene ID= novel_gene_chr9_2373 TPM= 3.86 Transcript Type= NA
chr9	113165520	113221361	113165520	113221361	-	ENST00000238256.7@FKBP15	ENST00000238256.7	protein_coding	113221191,113211477,113207212,113206509,113202961,113202531,113199814,113198855,113196932,113194027,113193492,113190471,113188389,113187793,113186249,113184695,113184292,113183751,113182766,113178630,113176537,113174428,113173453,113171581,113170522,113169224,113168460,113165520	113221361,113211592,113207296,113206578,113203035,113202629,113199963,113198923,113197078,113194169,113193549,113190578,113188491,113187899,113186363,113184804,113184399,113183845,113182868,113178801,113176673,113174583,113173605,113171706,113170629,113169942,113168556,113166155	Gene ID= ENSG00000119321.8 TPM= 19.79 Transcript Type= protein_coding
chr9	113189324	113221318	113189324	113221318	-	transcript2377.chr9.nic@FKBP15	transcript2377.chr9.nic	protein_coding	113221191,113211477,113207212,113206509,113202961,113202531,113199814,113198855,113196932,113194027,113193492,113189324	113221318,113211592,113207296,113206578,113203035,113202629,113199963,113198923,113197078,113194169,113193549,113190578	Gene ID= ENSG00000119321.8 TPM= 2.9 Transcript Type= NA
chr9	113267008	113275589	113267008	113275589	-	transcript2383.chr9.nnic@CDC26	transcript2383.chr9.nnic	protein_coding	113275382,113273329,113272427,113270807,113267008	113275589,113273438,113272548,113270937,113267439	Gene ID= ENSG00000176386.8 TPM= 7.72 Transcript Type= NA
chr9	113267008	113275589	113267008	113275589	-	ENST00000374206.3@CDC26	ENST00000374206.3	protein_coding	113275382,113273329,113272427,113267008	113275589,113273438,113272548,113267439	Gene ID= ENSG00000176386.8 TPM= 44.4 Transcript Type= protein_coding
chr9	113275343	113292905	113275343	113292905	+	ENST00000374199.8@PRPF4	ENST00000374199.8	protein_coding	113275343,113276548,113278945,113282646,113283132,113283389,113284295,113286232,113286705,113288175,113290466,113290700,113290898,113291467	113275770,113276725,113279131,113282733,113283211,113283482,113284389,113286290,113286828,113288264,113290588,113290807,113291016,113292905	Gene ID= ENSG00000136875.12 TPM= 4.34 Transcript Type= protein_coding
chr9	113275642	113292776	113275642	113292776	+	ENST00000374198.4@PRPF4	ENST00000374198.4	protein_coding	113275642,113276545,113278945,113282646,113283132,113283389,113284295,113286232,113286705,113288175,113290466,113290700,113290898,113291467	113275770,113276725,113279131,113282733,113283211,113283482,113284389,113286290,113286828,113288264,113290588,113290807,113291016,113292776	Gene ID= ENSG00000136875.12 TPM= 18.82 Transcript Type= protein_coding
chr9	113373419	113376999	113373419	113376999	-	ENST00000374180.3@HDHD3	ENST00000374180.3	protein_coding	113376729,113375453,113373419	113376999,113375567,113374529	Gene ID= ENSG00000119431.9 TPM= 14.96 Transcript Type= protein_coding
chr9	113373419	113376175	113373419	113376175	-	ENST00000238379.9@HDHD3	ENST00000238379.9	protein_coding	113375453,113373419	113376175,113374529	Gene ID= ENSG00000119431.9 TPM= 2.41 Transcript Type= protein_coding
chr9	113386317	113401333	113386317	113401333	-	ENST00000409155.7@ALAD	ENST00000409155.7	protein_coding	113401212,113393447,113392119,113391527,113390798,113390593,113390405,113389773,113389599,113389438,113388977,113386317	113401333,113393634,113392169,113391623,113390933,113390676,113390493,113389828,113389686,113389524,113389106,113388361	Gene ID= ENSG00000148218.15 TPM= 52.45 Transcript Type= protein_coding
chr9	113386317	113401284	113386317	113401284	-	transcript2405.chr9.nnic@ALAD	transcript2405.chr9.nnic	protein_coding	113401212,113390593,113390405,113389773,113389599,113389438,113388977,113386317	113401284,113390933,113390493,113389828,113389686,113389524,113389106,113388361	Gene ID= ENSG00000148218.15 TPM= 3.21 Transcript Type= NA
chr9	113386319	113401243	113386319	113401243	-	ENST00000482847.5@ALAD	ENST00000482847.5	protein_coding	113401212,113393447,113392119,113391527,113390798,113390593,113390405,113389773,113389599,113389438,113388977,113386319	113401243,113393634,113392335,113391623,113390933,113390676,113390493,113389828,113389686,113389524,113389106,113388361	Gene ID= ENSG00000148218.15 TPM= 2.25 Transcript Type= retained_intron
chr9	113501427	113597738	113501427	113597738	+	ENST00000343817.9@RGS3	ENST00000343817.9	protein_coding	113501427,113505442,113506388,113507287,113508541,113514458,113517541,113522930,113529221,113536796,113583450,113591333,113594430,113594919,113595599,113596768	113501630,113505523,113506493,113507638,113508580,113514654,113517624,113523041,113529264,113536918,113584427,113591397,113594531,113594980,113595765,113597738	Gene ID= ENSG00000138835.22 TPM= 4.83 Transcript Type= protein_coding
chr9	113501471	113544125	113501471	113544125	+	transcript2408.chr9.nic@RGS3	transcript2408.chr9.nic	protein_coding	113501471,113505442,113506388,113507287,113508541,113514458,113517541,113522930,113529221,113536796,113541320	113501630,113505523,113506493,113507638,113508580,113514654,113517624,113523041,113529264,113536918,113544125	Gene ID= ENSG00000138835.22 TPM= 1.93 Transcript Type= NA
chr9	113565581	113597738	113565581	113597738	+	transcript2410.chr9.nnic@RGS3	transcript2410.chr9.nnic	protein_coding	113565581,113583450,113591333,113594430,113594919,113595599,113596768	113565730,113584427,113591397,113594531,113594980,113595765,113597738	Gene ID= ENSG00000138835.22 TPM= 3.86 Transcript Type= NA
chr9	113594129	113597729	113594129	113597729	+	ENST00000620489.1@RGS3	ENST00000620489.1	protein_coding	113594129,113594430,113594919,113595599,113596768	113594338,113594531,113594980,113595765,113597729	Gene ID= ENSG00000138835.22 TPM= 4.83 Transcript Type= protein_coding
chr9	113544301	113545483	113544301	113545483	-	transcript2413.chr9.nnic@NA	transcript2413.chr9.nnic	NA	113544301	113545483	Gene ID= novel_gene_chr9_2414 TPM= 2.9 Transcript Type= NA
chr9	114587746	114598373	114587746	114598373	+	ENST00000374050.3@ATP6V1G1	ENST00000374050.3	protein_coding	114587746,114592552,114597570	114587920,114592652,114598373	Gene ID= ENSG00000136888.6 TPM= 132.25 Transcript Type= protein_coding
chr9	114610810	114611864	114610810	114611864	-	transcript2422.chr9.nnic@NA	transcript2422.chr9.nnic	NA	114610810	114611864	Gene ID= novel_gene_chr9_2423 TPM= 2.9 Transcript Type= NA
chr9	115020534	115118257	115020534	115118257	-	ENST00000350763.8@TNC	ENST00000350763.8	protein_coding	115117982,115090562,115085864,115084209,115082692,115081772,115077943,115076390,115076032,115073603,115064647,115063796,115062917,115059730,115057153,115048260,115046410,115042219,115040941,115038261,115036098,115035204,115031553,115030254,115029360,115026534,115023973,115020534	115118257,115091154,115087273,115084472,115082807,115081928,115078212,115076575,115076121,115073866,115064919,115064068,115063189,115060002,115057425,115048532,115046682,115042341,115041084,115038380,115036241,115035334,115031685,115030405,115029456,115026695,115024136,115021267	Gene ID= ENSG00000041982.15 TPM= 6.27 Transcript Type= protein_coding
chr9	115020534	115118158	115020534	115118158	-	transcript2425.chr9.nic@TNC	transcript2425.chr9.nic	protein_coding	115117982,115090562,115085864,115084209,115082692,115081772,115077943,115076390,115076032,115073603,115042219,115040941,115038261,115036098,115035204,115031553,115030254,115029360,115026534,115023973,115020534	115118158,115091154,115087273,115084472,115082807,115081928,115078212,115076575,115076121,115073866,115042341,115041084,115038380,115036241,115035334,115031685,115030405,115029456,115026695,115024136,115021267	Gene ID= ENSG00000041982.15 TPM= 10.14 Transcript Type= NA
chr9	116425228	116687258	116425228	116687258	-	transcript2426.chr9.nic@ASTN2	transcript2426.chr9.nic	protein_coding	116687066,116651528,116620310,116618324,116487359,116442453,116440609,116425228	116687258,116651793,116620443,116618472,116487500,116442553,116440792,116426088	Gene ID= ENSG00000148219.16 TPM= 5.79 Transcript Type= NA
chr9	116687302	116701298	116687302	116701298	+	ENST00000450136.1@TRIM32	ENST00000450136.1	protein_coding	116687302,116697662	116687381,116701298	Gene ID= ENSG00000119401.10 TPM= 9.65 Transcript Type= protein_coding
chr9	120388876	120534049	120388876	120534049	-	transcript2436.chr9.nnic@CDK5RAP2	transcript2436.chr9.nnic	protein_coding	120533917,120529978,120528744,120527806,120524986,120518427,120491307,120487294,120477350,120471748,120470111,120467860,120460572,120458450,120453456,120447895,120443620,120439399,120437295,120422693,120419788,120415040,120411358,120409127,120408347,120407012,120404036,120402806,120400742,120394512,120389741,120388876	120534049,120530140,120528797,120527925,120525078,120518645,120491477,120487437,120477450,120471878,120470220,120467997,120460667,120458622,120453873,120448126,120443742,120439972,120437527,120422741,120419960,120415159,120411474,120409316,120408468,120407248,120404113,120403071,120400885,120394638,120389787,120389292	Gene ID= ENSG00000136861.17 TPM= 3.54 Transcript Type= NA
chr9	120388876	120534049	120388876	120534049	-	transcript2437.chr9.nnic@CDK5RAP2	transcript2437.chr9.nnic	protein_coding	120533917,120529978,120528744,120527806,120524986,120518427,120491307,120487294,120477350,120471748,120470111,120467860,120458450,120453456,120447895,120443620,120439399,120437295,120422693,120419788,120415040,120411358,120409127,120408347,120407012,120404036,120402806,120400742,120394512,120389741,120388876	120534049,120530140,120528797,120527925,120525078,120518645,120491477,120487437,120477450,120471878,120470220,120467997,120458622,120453873,120448126,120443742,120439972,120437527,120422741,120419960,120415159,120411474,120409316,120408468,120407248,120404113,120403071,120400885,120394638,120389787,120389292	Gene ID= ENSG00000136861.17 TPM= 5.47 Transcript Type= NA
chr9	120388870	120580158	120388870	120580158	-	ENST00000349780.8@CDK5RAP2	ENST00000349780.8	protein_coding	120579920,120571974,120568321,120550792,120545714,120539041,120536372,120529978,120528744,120527806,120524986,120518427,120491307,120487294,120477350,120471748,120470111,120467860,120460572,120458450,120453456,120447895,120443620,120439399,120437295,120422693,120419788,120415040,120411358,120409127,120408347,120407012,120404036,120402806,120400742,120394512,120389741,120388870	120580158,120572041,120568388,120550902,120545790,120539164,120536526,120530140,120528797,120527925,120525078,120518645,120491477,120487437,120477450,120471878,120470220,120467997,120460667,120458622,120453873,120448126,120443742,120439972,120437527,120422741,120419960,120415159,120411474,120409316,120408468,120407248,120404113,120403071,120400885,120394638,120389787,120389292	Gene ID= ENSG00000136861.17 TPM= 15.13 Transcript Type= protein_coding
chr9	120600922	120605402	120600922	120605402	-	transcript2444.chr9.nnic@NA	transcript2444.chr9.nnic	NA	120600922	120605402	Gene ID= novel_gene_chr9_2445 TPM= 1.93 Transcript Type= NA
chr9	120764175	120793412	120764175	120793412	-	transcript2453.chr9.nnic@FBXW2	transcript2453.chr9.nnic	protein_coding	120793354,120792908,120787769,120778351,120776093,120772754,120771348,120764175	120793412,120793257,120788278,120778545,120776226,120772840,120771517,120764847	Gene ID= ENSG00000119402.16 TPM= 1.93 Transcript Type= NA
chr9	120764175	120793412	120764175	120793412	-	transcript2457.chr9.nnic@FBXW2	transcript2457.chr9.nnic	protein_coding	120793354,120793149,120787769,120776093,120772754,120771348,120764175	120793412,120793257,120788186,120776226,120772840,120771517,120764847	Gene ID= ENSG00000119402.16 TPM= 1.93 Transcript Type= NA
chr9	120816355	120842924	120816355	120842924	-	transcript2469.chr9.nnic@PSMD5	transcript2469.chr9.nnic	protein_coding	120842737,120833312,120831832,120831331,120829099,120826765,120824494,120820839,120816355	120842924,120833456,120831945,120831459,120829208,120826907,120824685,120820979,120818163	Gene ID= ENSG00000095261.13 TPM= 1.93 Transcript Type= NA
chr9	120816355	120842922	120816355	120842922	-	transcript2471.chr9.nnic@PSMD5	transcript2471.chr9.nnic	protein_coding	120842737,120833312,120831832,120831331,120824494,120821355,120820839,120816355	120842922,120833456,120831945,120831459,120824685,120821464,120820979,120818163	Gene ID= ENSG00000095261.13 TPM= 1.93 Transcript Type= NA
chr9	120816053	120842984	120816053	120842984	-	ENST00000210313.7@PSMD5	ENST00000210313.7	protein_coding	120842737,120833312,120831832,120831331,120829099,120826765,120824494,120821355,120820839,120816053	120842984,120833456,120831945,120831459,120829208,120826907,120824685,120821464,120820979,120818163	Gene ID= ENSG00000095261.13 TPM= 7.72 Transcript Type= protein_coding
chr9	120843085	120845319	120843085	120845319	+	transcript2477.chr9.nnic@NA	transcript2477.chr9.nnic	NA	120843085	120845319	Gene ID= novel_gene_chr9_2478 TPM= 1.93 Transcript Type= NA
chr9	120855652	120868911	120855652	120868911	-	ENST00000419155.5@PHF19	ENST00000419155.5	protein_coding	120868808,120866870,120866028,120865710,120864049,120862588,120861918,120861089,120860090,120855652	120868911,120866965,120866096,120865830,120864116,120862749,120862005,120861174,120860185,120858286	Gene ID= ENSG00000119403.13 TPM= 11.1 Transcript Type= protein_coding
chr9	120855699	120868874	120855699	120868874	-	transcript2485.chr9.nnic@PHF19	transcript2485.chr9.nnic	protein_coding	120868808,120866870,120866028,120865710,120864049,120862613,120861089,120860090,120855699	120868874,120866965,120866096,120865830,120864116,120862749,120861174,120860185,120858286	Gene ID= ENSG00000119403.13 TPM= 5.31 Transcript Type= NA
chr9	121179710	121201863	121179710	121201863	-	transcript2494.chr9.nnic@RAB14	transcript2494.chr9.nnic	protein_coding	121201639,121193361,121192171,121190554,121186953,121183311,121182930,121179710	121201863,121193419,121192224,121190731,121187019,121183382,121182960,121181573	Gene ID= ENSG00000119396.10 TPM= 2.9 Transcript Type= NA
chr9	121178137	121201869	121178137	121201869	-	ENST00000373840.8@RAB14	ENST00000373840.8	protein_coding	121201639,121193361,121192171,121190554,121186953,121183311,121182930,121178137	121201869,121193419,121192224,121190731,121187019,121183398,121182960,121181573	Gene ID= ENSG00000119396.10 TPM= 3.86 Transcript Type= protein_coding
chr9	121268117	121332842	121268117	121332842	+	transcript2507.chr9.nic@GSN	transcript2507.chr9.nic	protein_coding	121268117,121281470,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121268219,121281562,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842	Gene ID= ENSG00000148180.19 TPM= 48.48 Transcript Type= NA
chr9	121268168	121332843	121268168	121332843	+	ENST00000449733.7@GSN	ENST00000449733.7	protein_coding	121268168,121281470,121282439,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121268219,121281562,121282550,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332843	Gene ID= ENSG00000148180.19 TPM= 41.72 Transcript Type= protein_coding
chr9	121299793	121332842	121299793	121332842	+	ENST00000373818.8@GSN	ENST00000373818.8	protein_coding	121299793,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121300005,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842	Gene ID= ENSG00000148180.19 TPM= 1275.39 Transcript Type= protein_coding
chr9	121339077	121370205	121339077	121370205	-	ENST00000286713.6@STOM	ENST00000286713.6	protein_coding	121370127,121356053,121354601,121353220,121349120,121348015,121339077	121370205,121356156,121354673,121353302,121349323,121348149,121341408	Gene ID= ENSG00000148175.12 TPM= 142.87 Transcript Type= protein_coding
chr9	121651594	121785530	121651594	121785530	+	ENST00000408936.7@DAB2IP	ENST00000408936.7	protein_coding	121651594,121678678,121699325,121757013,121758898,121759885,121763505,121763735,121766494,121768432,121770546,121772607,121774260,121776198,121781464,121782331	121651899,121678781,121699458,121757166,121758996,121760439,121763649,121763879,121766730,121768633,121770724,121773495,121774412,121776391,121781551,121785530	Gene ID= ENSG00000136848.16 TPM= 77.22 Transcript Type= protein_coding
chr9	121815674	121819452	121815674	121819452	-	ENST00000567068.1@AL596244.1	ENST00000567068.1	sense_overlapping	121815674	121819452	Gene ID= ENSG00000261534.1 TPM= 1.93 Transcript Type= sense_overlapping
chr9	121988910	122093606	121988910	122093606	-	ENST00000373776.4@TTLL11	ENST00000373776.4	protein_coding	122092687,122039272,122031723,121988910	122093606,122039368,122031856,121989770	Gene ID= ENSG00000175764.14 TPM= 5.79 Transcript Type= protein_coding
chr9	122144058	122159779	122144058	122159779	-	transcript2572.chr9.nnic@NDUFA8	transcript2572.chr9.nnic	protein_coding	122159627,122148112,122144058	122159779,122148277,122144378	Gene ID= ENSG00000119421.6 TPM= 5.79 Transcript Type= NA
chr9	122144058	122159819	122144058	122159819	-	ENST00000373768.3@NDUFA8	ENST00000373768.3	protein_coding	122159627,122152245,122148112,122144058	122159819,122152408,122148277,122144378	Gene ID= ENSG00000119421.6 TPM= 92.67 Transcript Type= protein_coding
chr9	122202579	122228941	122202579	122228941	-	ENST00000340587.7@LHX6	ENST00000340587.7	protein_coding	122228657,122227409,122226848,122226376,122217068,122214283,122213974,122213606,122202579	122228941,122227480,122227030,122226497,122217288,122214383,122214069,122213780,122204780	Gene ID= ENSG00000106852.15 TPM= 3.86 Transcript Type= protein_coding
chr9	122237624	122264839	122237624	122264839	-	ENST00000417201.3@RBM18	ENST00000417201.3	protein_coding	122264715,122261380,122251847,122247518,122245256,122237624	122264839,122261508,122251973,122247604,122245341,122242043	Gene ID= ENSG00000119446.13 TPM= 7.24 Transcript Type= protein_coding
chr9	122264896	122323461	122264896	122323461	+	transcript2577.chr9.nnic@MRRF	transcript2577.chr9.nnic	protein_coding	122264896,122265462,122270864,122280443,122285169,122285780,122286039,122291749,122305788,122313227,122322540	122264938,122265780,122271075,122280598,122285287,122285946,122286166,122291840,122305877,122313386,122323461	Gene ID= ENSG00000148187.17 TPM= 2.9 Transcript Type= NA
chr9	122264141	122323461	122264141	122323461	+	transcript2578.chr9.nnic@MRRF	transcript2578.chr9.nnic	protein_coding	122264141,122270864,122280443,122285169,122285780,122286039,122291749,122305788,122313227,122322540	122264938,122271075,122280598,122285287,122285946,122286166,122291840,122305877,122313386,122323461	Gene ID= ENSG00000148187.17 TPM= 2.9 Transcript Type= NA
chr9	122264880	122323461	122264880	122323461	+	transcript2581.chr9.nic@MRRF	transcript2581.chr9.nic	protein_coding	122264880,122270864,122280443,122285169,122286039,122291749,122313227,122322540	122264938,122271075,122280598,122285946,122286166,122291840,122313386,122323461	Gene ID= ENSG00000148187.17 TPM= 4.18 Transcript Type= NA
chr9	122264886	122323461	122264886	122323461	+	transcript2582.chr9.nic@MRRF	transcript2582.chr9.nic	protein_coding	122264886,122265462,122270864,122280443,122285169,122291749,122313227,122322540	122264938,122265545,122271075,122280598,122285287,122291840,122313386,122323461	Gene ID= ENSG00000148187.17 TPM= 5.15 Transcript Type= NA
chr9	122264897	122323461	122264897	122323461	+	transcript2583.chr9.nic@MRRF	transcript2583.chr9.nic	protein_coding	122264897,122265462,122270864,122280443,122285169,122291749,122313227,122322540	122264938,122265780,122271075,122280598,122285287,122291840,122313386,122323461	Gene ID= ENSG00000148187.17 TPM= 5.15 Transcript Type= NA
chr9	122818344	122828631	122818344	122828631	-	ENST00000259467.8@PDCL	ENST00000259467.8	protein_coding	122828471,122826616,122823016,122818344	122828631,122826792,122823197,122820636	Gene ID= ENSG00000136940.13 TPM= 14.48 Transcript Type= protein_coding
chr9	122849453	122905283	122849453	122905283	-	ENST00000357244.6@RC3H2	ENST00000357244.6	protein_coding	122905110,122897279,122892909,122890312,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122857923,122855732,122855184,122854531,122854185,122853952,122851323,122851081,122849453	122905283,122897576,122893026,122890545,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122858093,122855878,122855397,122854615,122854266,122854086,122851436,122851229,122849822	Gene ID= ENSG00000056586.15 TPM= 7.72 Transcript Type= protein_coding
chr9	122908056	122913330	122908056	122913330	-	ENST00000373659.3@ZBTB6	ENST00000373659.3	protein_coding	122913251,122908056	122913330,122912081	Gene ID= ENSG00000186130.4 TPM= 7.72 Transcript Type= protein_coding
chr9	122915566	122931500	122915566	122931500	-	ENST00000373656.3@ZBTB26	ENST00000373656.3	protein_coding	122931437,122915566	122931500,122919944	Gene ID= ENSG00000171448.8 TPM= 6.76 Transcript Type= protein_coding
chr9	122941009	123104866	122941009	123104866	+	ENST00000373647.8@RABGAP1	ENST00000373647.8	protein_coding	122941009,122957011,122984485,122986215,122989297,122990056,122996041,122996539,122997259,122998597,123010354,123015543,123020309,123065348,123070350,123073552,123074285,123076245,123076634,123089758,123090275,123097741,123098715,123099478,123101566,123103091	122941093,122957209,122984719,122986419,122989471,122990213,122996151,122996605,122997361,122998766,123010528,123015636,123020459,123065461,123070424,123073677,123074428,123076286,123076762,123089850,123090385,123097845,123098798,123099549,123101763,123104866	Gene ID= ENSG00000011454.16 TPM= 18.34 Transcript Type= protein_coding
chr9	122941020	123104866	122941020	123104866	+	transcript2642.chr9.nnic@RABGAP1	transcript2642.chr9.nnic	protein_coding	122941020,122984485,122986215,122989297,122990056,122996041,122996539,122997259,122998597,123010354,123015543,123020309,123065348,123070350,123073552,123074285,123076245,123076634,123089758,123090275,123097741,123098715,123099478,123101566,123103091	122941093,122984769,122986419,122989471,122990213,122996151,122996605,122997361,122998766,123010528,123015636,123020459,123065461,123070424,123073677,123074428,123076286,123076762,123089850,123090385,123097845,123098798,123099549,123101763,123104866	Gene ID= ENSG00000011454.16 TPM= 2.9 Transcript Type= NA
chr9	123125220	123268610	123125220	123268610	-	transcript2653.chr9.nic@STRBP	transcript2653.chr9.nic	protein_coding	123268436,123184132,123179007,123173677,123169902,123160977,123160367,123159096,123158332,123158012,123147778,123146855,123139529,123136381,123136041,123132845,123128214,123125220	123268610,123184298,123179227,123173842,123170046,123161068,123160462,123159207,123158429,123158123,123147870,123147054,123139687,123136515,123136181,123132968,123128258,123125673	Gene ID= ENSG00000165209.18 TPM= 1.93 Transcript Type= NA
chr9	123124709	123268529	123124709	123268529	-	transcript2655.chr9.nnic@STRBP	transcript2655.chr9.nnic	protein_coding	123268436,123184132,123179007,123173677,123169902,123160977,123160367,123158332,123158012,123147778,123146855,123139529,123136381,123136041,123132845,123128214,123124709	123268529,123184298,123179227,123173842,123170046,123161068,123160462,123158429,123158123,123147870,123147054,123139687,123136515,123136181,123132968,123128258,123125673	Gene ID= ENSG00000165209.18 TPM= 1.93 Transcript Type= NA
chr9	123380844	123381414	123380844	123381414	-	transcript2665.chr9.nnic@NA	transcript2665.chr9.nnic	NA	123380844	123381414	Gene ID= novel_gene_chr9_2666 TPM= 1.93 Transcript Type= NA
chr9	124353466	124415449	124353466	124415449	-	transcript2674.chr9.nic@PSMB7	transcript2674.chr9.nic	protein_coding	124415364,124414842,124413908,124412352,124384598,124356764,124353466	124415449,124414935,124414005,124412492,124384656,124356915,124353709	Gene ID= ENSG00000136930.12 TPM= 12.55 Transcript Type= NA
chr9	124353466	124415439	124353466	124415439	-	ENST00000259457.7@PSMB7	ENST00000259457.7	protein_coding	124415364,124414842,124413908,124412352,124405317,124384598,124356764,124353466	124415439,124414935,124414005,124412492,124405432,124384656,124356915,124353709	Gene ID= ENSG00000136930.12 TPM= 173.76 Transcript Type= protein_coding
chr9	124357499	124359182	124357499	124359182	+	transcript2681.chr9.nnic@NA	transcript2681.chr9.nnic	NA	124357499	124359182	Gene ID= novel_gene_chr9_2682 TPM= 1.93 Transcript Type= NA
chr9	124413344	124414623	124413344	124414623	+	transcript2679.chr9.nnic@NA	transcript2679.chr9.nnic	NA	124413344	124414623	Gene ID= novel_gene_chr9_2680 TPM= 1.93 Transcript Type= NA
chr9	124857884	124861961	124857884	124861961	-	ENST00000348462.5@RPL35	ENST00000348462.5	protein_coding	124861910,124861419,124860183,124857884	124861961,124861555,124860264,124858067	Gene ID= ENSG00000136942.14 TPM= 803.62 Transcript Type= protein_coding
chr9	124857883	124861936	124857883	124861936	-	ENST00000487431.1@RPL35	ENST00000487431.1	protein_coding	124861419,124860183,124857883	124861936,124860264,124858067	Gene ID= ENSG00000136942.14 TPM= 33.3 Transcript Type= retained_intron
chr9	124862130	124877733	124862130	124877733	+	ENST00000353214.6@ARPC5L	ENST00000353214.6	protein_coding	124862130,124863988,124868428,124873692,124874975,124876878	124862398,124864107,124869439,124873764,124875151,124877733	Gene ID= ENSG00000136950.13 TPM= 29.92 Transcript Type= protein_coding
chr9	124878357	124941099	124878357	124941099	-	ENST00000373555.8@GOLGA1	ENST00000373555.8	protein_coding	124940971,124940106,124938577,124931316,124929216,124928188,124926709,124923095,124921723,124921129,124911901,124908377,124900452,124899329,124898549,124890389,124889434,124889143,124888253,124882510,124881784,124881171,124878357	124941099,124940155,124938866,124931406,124929290,124928285,124926741,124923223,124921892,124921240,124912026,124908472,124900547,124899478,124898644,124890478,124889536,124889303,124888396,124882569,124881954,124881257,124880610	Gene ID= ENSG00000136935.13 TPM= 21.24 Transcript Type= protein_coding
chr9	124879218	124941005	124879218	124941005	-	transcript2701.chr9.nnic@GOLGA1	transcript2701.chr9.nnic	protein_coding	124940913,124940106,124938577,124931316,124929216,124928188,124926709,124923095,124921723,124921129,124911901,124908377,124900452,124899329,124898549,124890389,124889434,124889143,124888253,124882510,124881784,124881171,124879218	124941005,124940155,124938866,124931406,124929290,124928285,124926741,124923223,124921892,124921240,124912026,124908472,124900547,124899478,124898644,124890478,124889536,124889303,124888396,124882569,124881954,124881257,124880610	Gene ID= ENSG00000136935.13 TPM= 1.93 Transcript Type= NA
chr9	124922921	124941081	124922921	124941081	-	transcript2707.chr9.nic@GOLGA1	transcript2707.chr9.nic	protein_coding	124940971,124940106,124938577,124931316,124929216,124928188,124926709,124922921	124941081,124940155,124938866,124931406,124929290,124928285,124926741,124923223	Gene ID= ENSG00000136935.13 TPM= 1.93 Transcript Type= NA
chr9	125146574	125189939	125146574	125189939	-	ENST00000451402.5@PPP6C	ENST00000451402.5	protein_coding	125189562,125188919,125171085,125160841,125158241,125153906,125153533,125146574	125189939,125188947,125171180,125160906,125158382,125153985,125153742,125149921	Gene ID= ENSG00000119414.11 TPM= 7.96 Transcript Type= protein_coding
chr9	125146573	125189818	125146573	125189818	-	ENST00000373547.8@PPP6C	ENST00000373547.8	protein_coding	125189644,125171085,125160841,125158241,125153906,125153533,125146573	125189818,125171180,125160906,125158382,125153985,125153742,125149921	Gene ID= ENSG00000119414.11 TPM= 19.55 Transcript Type= protein_coding
chr9	125200518	125233997	125200518	125233997	+	transcript2747.chr9.nnic@RABEPK	transcript2747.chr9.nnic	protein_coding	125200518,125200780,125203008,125207564,125227910,125232596,125233688	125200577,125200906,125203066,125207721,125228059,125232745,125233997	Gene ID= ENSG00000136933.16 TPM= 2.9 Transcript Type= NA
chr9	125200603	125234055	125200603	125234055	+	ENST00000373538.7@RABEPK	ENST00000373538.7	protein_coding	125200603,125203008,125207564,125213370,125220539,125227910,125232596,125233688	125200906,125203066,125207721,125213522,125220700,125228059,125232745,125234055	Gene ID= ENSG00000136933.16 TPM= 2.9 Transcript Type= protein_coding
chr9	125234853	125241330	125234853	125241330	-	ENST00000324460.6@HSPA5	ENST00000324460.6	protein_coding	125241005,125240676,125240172,125239421,125238941,125238590,125238141,125234853	125241330,125240907,125240309,125239533,125239331,125238827,125238308,125237154	Gene ID= ENSG00000044574.7 TPM= 29.92 Transcript Type= protein_coding
chr9	125261794	125341264	125261794	125341264	+	transcript2764.chr9.nic@GAPVD1	transcript2764.chr9.nic	protein_coding	125261794,125268936,125295458,125298890,125301983,125305063,125307413,125307691,125312452,125321433,125323798,125326416,125330078,125331926,125332510,125337018,125337221,125341177	125261959,125268984,125295574,125299106,125302826,125305149,125307547,125307880,125312612,125321562,125323923,125326589,125330218,125332060,125332629,125337095,125337591,125341264	Gene ID= ENSG00000165219.21 TPM= 5.15 Transcript Type= NA
chr9	125261794	125341264	125261794	125341264	+	transcript2771.chr9.nic@GAPVD1	transcript2771.chr9.nic	protein_coding	125261794,125268936,125298890,125301983,125305063,125307413,125307691,125312452,125321433,125323798,125326416,125330078,125331926,125332510,125337018,125337221,125341177	125261959,125268984,125299106,125302826,125305149,125307547,125307880,125312612,125321562,125323923,125326589,125330218,125332060,125332629,125337095,125337591,125341264	Gene ID= ENSG00000165219.21 TPM= 9.97 Transcript Type= NA
chr9	125261794	125341264	125261794	125341264	+	transcript2777.chr9.nic@GAPVD1	transcript2777.chr9.nic	protein_coding	125261794,125298890,125301983,125305063,125307413,125307691,125312452,125321433,125323798,125326416,125330078,125331926,125332510,125337018,125337221,125341177	125261959,125299106,125302826,125305149,125307547,125307880,125312612,125321562,125323923,125326589,125330218,125332060,125332629,125337095,125337591,125341264	Gene ID= ENSG00000165219.21 TPM= 8.04 Transcript Type= NA
chr9	125438469	125707226	125438469	125707226	-	transcript2785.chr9.nnic@MAPKAP1	transcript2785.chr9.nnic	protein_coding	125706971,125672316,125669818,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125438469	125707226,125672540,125669907,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 3.86 Transcript Type= NA
chr9	125437394	125707234	125437394	125707234	-	ENST00000394063.5@MAPKAP1	ENST00000394063.5	protein_coding	125706971,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394	125707234,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 2.9 Transcript Type= protein_coding
chr9	125669887	125707266	125669887	125707266	-	transcript2809.chr9.nic@MAPKAP1	transcript2809.chr9.nic	protein_coding	125706971,125672316,125669887	125707266,125672643,125669907	Gene ID= ENSG00000119487.16 TPM= 2.9 Transcript Type= NA
chr9	125437394	125707234	125437394	125707234	-	ENST00000265960.7@MAPKAP1	ENST00000265960.7	protein_coding	125706971,125672316,125669818,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394	125707234,125672643,125669907,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 26.38 Transcript Type= protein_coding
chr9	125437394	125707212	125437394	125707212	-	ENST00000373503.7@MAPKAP1	ENST00000373503.7	protein_coding	125706971,125669818,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394	125707212,125669907,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 2.9 Transcript Type= protein_coding
chr9	125437394	125707203	125437394	125707203	-	ENST00000350766.7@MAPKAP1	ENST00000350766.7	protein_coding	125706971,125672316,125669818,125657651,125585555,125559633,125543059,125484443,125467972,125444501,125437394	125707203,125672643,125669907,125657799,125585727,125559809,125543168,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 4.18 Transcript Type= protein_coding
chr9	125521468	125707231	125521468	125707231	-	ENST00000394060.7@MAPKAP1	ENST00000394060.7	protein_coding	125706971,125672316,125669818,125657651,125585555,125559633,125543059,125521468	125707231,125672643,125669907,125657799,125585727,125559809,125543168,125521765	Gene ID= ENSG00000119487.16 TPM= 1.28 Transcript Type= protein_coding
chr9	125747438	125967377	125747438	125967377	+	ENST00000373489.9@PBX3	ENST00000373489.9	protein_coding	125747438,125748550,125915686,125929655,125935472,125960684,125962102,125963012,125965831	125747653,125748623,125915927,125929845,125935607,125960849,125962214,125963101,125967377	Gene ID= ENSG00000167081.16 TPM= 3.86 Transcript Type= protein_coding
chr9	126326823	126456463	126326823	126456463	+	transcript2817.chr9.nnic@MVB12B	transcript2817.chr9.nnic	protein_coding	126326823,126340508,126381064,126386562,126392066,126395575,126421854,126455209	126327010,126340630,126381171,126386658,126392195,126395697,126421948,126456463	Gene ID= ENSG00000196814.14 TPM= 1.93 Transcript Type= NA
chr9	126326849	126507041	126326849	126507041	+	ENST00000361171.7@MVB12B	ENST00000361171.7	protein_coding	126326849,126340508,126381064,126386562,126392066,126395575,126421854,126481369,126483973,126503177	126327010,126340630,126381171,126386658,126392195,126395697,126421948,126481424,126484032,126507041	Gene ID= ENSG00000196814.14 TPM= 37.65 Transcript Type= protein_coding
chr9	126803193	126805738	126803193	126805738	-	transcript2834.chr9.nnic@NA	transcript2834.chr9.nnic	NA	126803193	126805738	Gene ID= novel_gene_chr9_2835 TPM= 2.9 Transcript Type= NA
chr9	126804999	126835229	126804999	126835229	+	transcript2821.chr9.nnic@ZBTB43	transcript2821.chr9.nnic	protein_coding	126804999,126808793,126822721,126832487	126805132,126808915,126822828,126835229	Gene ID= ENSG00000169155.9 TPM= 6.03 Transcript Type= NA
chr9	126804999	126835229	126804999	126835229	+	transcript2822.chr9.nnic@ZBTB43	transcript2822.chr9.nnic	protein_coding	126804999,126808793,126823480,126832487	126805132,126808915,126823541,126835229	Gene ID= ENSG00000169155.9 TPM= 6.03 Transcript Type= NA
chr9	126805014	126835229	126805014	126835229	+	transcript2824.chr9.nnic@ZBTB43	transcript2824.chr9.nnic	protein_coding	126805014,126808097,126808793,126832487	126805132,126808192,126808915,126835229	Gene ID= ENSG00000169155.9 TPM= 7 Transcript Type= NA
chr9	126805012	126835229	126805012	126835229	+	transcript2829.chr9.nnic@ZBTB43	transcript2829.chr9.nnic	protein_coding	126805012,126808793,126832487	126805570,126808915,126835229	Gene ID= ENSG00000169155.9 TPM= 7 Transcript Type= NA
chr9	126831409	126837103	126831409	126837103	+	ENST00000373457.1@ZBTB43	ENST00000373457.1	protein_coding	126831409	126837103	Gene ID= ENSG00000169155.9 TPM= 9.17 Transcript Type= protein_coding
chr9	126805015	126838210	126805015	126838210	+	ENST00000373464.4@ZBTB43	ENST00000373464.4	protein_coding	126805015,126808793,126832487	126805132,126808915,126838210	Gene ID= ENSG00000169155.9 TPM= 6.27 Transcript Type= protein_coding
chr9	126860665	126885878	126860665	126885878	+	ENST00000319119.4@ZBTB34	ENST00000319119.4	protein_coding	126860665,126879390	126860739,126885878	Gene ID= ENSG00000177125.5 TPM= 4.83 Transcript Type= protein_coding
chr9	127087332	127122883	127087332	127122883	-	ENST00000373425.7@ANGPTL2	ENST00000373425.7	protein_coding	127122315,127107915,127093733,127091670,127087332	127122883,127108780,127093926,127091940,127089138	Gene ID= ENSG00000136859.9 TPM= 8.69 Transcript Type= protein_coding
chr9	127397171	127407665	127397171	127407665	+	transcript2855.chr9.nnic@SLC2A8	transcript2855.chr9.nnic	protein_coding	127397171,127397905,127399907,127402557,127403660,127403959,127404818,127405420,127407112	127397286,127398111,127400006,127402753,127403803,127404067,127404991,127405565,127407665	Gene ID= ENSG00000136856.17 TPM= 5.47 Transcript Type= NA
chr9	127397138	127407855	127397138	127407855	+	ENST00000610552.4@SLC2A8	ENST00000610552.4	protein_coding	127397138,127399907,127402557,127403660,127403959,127404818,127405420,127407112	127397286,127400006,127402753,127403803,127404067,127404991,127405565,127407855	Gene ID= ENSG00000136856.17 TPM= 3.86 Transcript Type= protein_coding
chr9	127397171	127407665	127397171	127407665	+	transcript2862.chr9.nnic@SLC2A8	transcript2862.chr9.nnic	protein_coding	127397171,127397905,127399907,127403660,127403959,127404818,127405420,127407112	127397286,127398111,127400006,127403803,127404067,127404991,127405565,127407665	Gene ID= ENSG00000136856.17 TPM= 3.54 Transcript Type= NA
chr9	127397138	127407665	127397138	127407665	+	transcript2864.chr9.nic@SLC2A8	transcript2864.chr9.nic	protein_coding	127397138,127399907,127402557,127403660,127403959,127404818,127407112	127397286,127400006,127402753,127403803,127404067,127404991,127407665	Gene ID= ENSG00000136856.17 TPM= 3.86 Transcript Type= NA
chr9	127397169	127407665	127397169	127407665	+	transcript2875.chr9.nnic@SLC2A8	transcript2875.chr9.nnic	protein_coding	127397169,127403660,127403959,127404818,127405420,127407112	127397286,127403803,127404067,127404991,127405565,127407665	Gene ID= ENSG00000136856.17 TPM= 3.54 Transcript Type= NA
chr9	127397142	127407898	127397142	127407898	+	ENST00000373371.7@SLC2A8	ENST00000373371.7	protein_coding	127397142,127397376,127397905,127399907,127402557,127403660,127403959,127404818,127405420,127407112	127397286,127397538,127398111,127400006,127402753,127403803,127404067,127404991,127405565,127407898	Gene ID= ENSG00000136856.17 TPM= 5.79 Transcript Type= protein_coding
chr9	127424374	127445371	127424374	127445371	+	ENST00000543471.5@ZNF79	ENST00000543471.5	protein_coding	127424374,127428552,127428832,127435090,127435908,127444029	127424803,127428660,127428920,127435216,127436003,127445371	Gene ID= ENSG00000196152.10 TPM= 2.25 Transcript Type= protein_coding
chr9	127424374	127445371	127424374	127445371	+	ENST00000612342.4@ZNF79	ENST00000612342.4	protein_coding	127424374,127428832,127435090,127435908,127444029	127424910,127428920,127435216,127436003,127445371	Gene ID= ENSG00000196152.10 TPM= 2.25 Transcript Type= protein_coding
chr9	127424382	127445372	127424382	127445372	+	ENST00000342483.5@ZNF79	ENST00000342483.5	protein_coding	127424382,127428832,127435090,127435908,127444029	127424803,127428920,127435216,127436003,127445372	Gene ID= ENSG00000196152.10 TPM= 3.21 Transcript Type= protein_coding
chr9	127447674	127451405	127447674	127451405	-	ENST00000497825.5@RPL12	ENST00000497825.5	protein_coding	127451050,127450731,127449610,127449281,127448337,127447877,127447674	127451405,127450804,127449708,127449362,127448423,127447989,127447726	Gene ID= ENSG00000197958.12 TPM= 14.48 Transcript Type= processed_transcript
chr9	127447674	127451405	127447674	127451405	-	ENST00000361436.9@RPL12	ENST00000361436.9	protein_coding	127451281,127450731,127449610,127449281,127448337,127447877,127447674	127451405,127450804,127449708,127449362,127448423,127447989,127447726	Gene ID= ENSG00000197958.12 TPM= 586.91 Transcript Type= protein_coding
chr9	127451481	127503499	127451481	127503499	+	transcript2892.chr9.nnic@LRSAM1	transcript2892.chr9.nnic	protein_coding	127451481,127451929,127454496,127454998,127455576,127457316,127459003,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774,127503422	127451669,127452084,127454599,127455054,127455620,127457393,127459071,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127502879,127503499	Gene ID= ENSG00000148356.13 TPM= 1.93 Transcript Type= NA
chr9	127451486	127503501	127451486	127503501	+	ENST00000300417.10@LRSAM1	ENST00000300417.10	protein_coding	127451486,127451929,127454496,127454998,127455576,127457316,127459003,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774	127451669,127452084,127454599,127455054,127455620,127457393,127459071,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127503501	Gene ID= ENSG00000148356.13 TPM= 29.92 Transcript Type= protein_coding
chr9	127451513	127503499	127451513	127503499	+	ENST00000323301.8@LRSAM1	ENST00000323301.8	protein_coding	127451513,127454496,127454998,127455576,127457316,127459003,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774	127452084,127454599,127455054,127455620,127457393,127459071,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127503499	Gene ID= ENSG00000148356.13 TPM= 16.41 Transcript Type= protein_coding
chr9	127505339	127569132	127505339	127569132	-	transcript2910.chr9.nnic@FAM129B	transcript2910.chr9.nnic	protein_coding	127568820,127531648,127527194,127525058,127523679,127517826,127517112,127516857,127510146,127508976,127508422,127508093,127507867,127506196,127505339	127569132,127531778,127527322,127525163,127523846,127517941,127517216,127517019,127510333,127509131,127508538,127508200,127507978,127507431,127505612	Gene ID= ENSG00000136830.11 TPM= 4.34 Transcript Type= NA
chr9	127505343	127569088	127505343	127569088	-	ENST00000373312.3@FAM129B	ENST00000373312.3	protein_coding	127568820,127531648,127527194,127525058,127523679,127517826,127517112,127516857,127510146,127508976,127508422,127508093,127507867,127505343	127569088,127531778,127527322,127525163,127523846,127517941,127517216,127517019,127510333,127509131,127508538,127508200,127507978,127507431	Gene ID= ENSG00000136830.11 TPM= 14 Transcript Type= protein_coding
chr9	127713949	127715657	127713949	127715657	-	ENST00000543175.4@PTRH1	ENST00000543175.4	protein_coding	127715544,127714975,127714603,127714379,127713949	127715657,127715194,127714702,127714424,127714282	Gene ID= ENSG00000187024.14 TPM= 17.38 Transcript Type= protein_coding
chr9	127713972	127715604	127713972	127715604	-	ENST00000456267.5@PTRH1	ENST00000456267.5	protein_coding	127715544,127714975,127714603,127714379,127713972	127715604,127715194,127714702,127714424,127714189	Gene ID= ENSG00000187024.14 TPM= 2.9 Transcript Type= protein_coding
chr9	127731524	127735312	127731524	127735312	-	transcript2927.chr9.nic@TOR2A	transcript2927.chr9.nic	protein_coding	127734299,127732564,127731524	127735312,127733560,127732278	Gene ID= ENSG00000160404.17 TPM= 2.9 Transcript Type= NA
chr9	127738318	127762418	127738318	127762418	-	ENST00000429553.5@SH2D3C	ENST00000429553.5	protein_coding	127762121,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738318	127762418,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921	Gene ID= ENSG00000095370.19 TPM= 7.24 Transcript Type= protein_coding
chr9	127738317	127771438	127738317	127771438	-	ENST00000373277.8@SH2D3C	ENST00000373277.8	protein_coding	127771186,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738317	127771438,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921	Gene ID= ENSG00000095370.19 TPM= 13.03 Transcript Type= protein_coding
chr9	127785397	127790084	127785397	127790084	+	transcript2932.chr9.nic@CDK9	transcript2932.chr9.nic	protein_coding	127785397,127786701,127787518,127787947,127788214,127789178	127786240,127786782,127787608,127788113,127788692,127790084	Gene ID= ENSG00000136807.13 TPM= 4.83 Transcript Type= NA
chr9	127802851	127814059	127802851	127814059	+	transcript2946.chr9.nic@FPGS	transcript2946.chr9.nic	protein_coding	127802851,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807775,127808311,127808705,127808889,127809834,127810106,127811011,127814059	Gene ID= ENSG00000136877.14 TPM= 7.4 Transcript Type= NA
chr9	127803006	127814059	127803006	127814059	+	transcript2948.chr9.nic@FPGS	transcript2948.chr9.nic	protein_coding	127803006,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803156,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814059	Gene ID= ENSG00000136877.14 TPM= 10.54 Transcript Type= NA
chr9	127803208	127814059	127803208	127814059	+	ENST00000373225.7@FPGS	ENST00000373225.7	protein_coding	127803208,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803404,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814059	Gene ID= ENSG00000136877.14 TPM= 8.61 Transcript Type= protein_coding
chr9	127808947	127814059	127808947	127814059	+	transcript2976.chr9.nic@FPGS	transcript2976.chr9.nic	protein_coding	127808947,127810031,127810945,127813195	127809834,127810106,127811011,127814059	Gene ID= ENSG00000136877.14 TPM= 7.36 Transcript Type= NA
chr9	127802875	127814069	127802875	127814069	+	ENST00000373247.6@FPGS	ENST00000373247.6	protein_coding	127802875,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814069	Gene ID= ENSG00000136877.14 TPM= 103.52 Transcript Type= protein_coding
chr9	127802858	127814081	127802858	127814081	+	ENST00000393706.6@FPGS	ENST00000393706.6	protein_coding	127802858,127804285,127804499,127804636,127806973,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803062,127804413,127804552,127804700,127807087,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814081	Gene ID= ENSG00000136877.14 TPM= 2.76 Transcript Type= protein_coding
chr9	127814671	127817730	127814671	127817730	+	transcript2978.chr9.nnic@NA	transcript2978.chr9.nnic	NA	127814671	127817730	Gene ID= novel_gene_chr9_2979 TPM= 8.37 Transcript Type= NA
chr9	127815012	127854756	127815012	127854756	-	ENST00000373203.8@ENG	ENST00000373203.8	protein_coding	127854289,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127817149,127815943,127815012	127854756,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127816053,127815806	Gene ID= ENSG00000106991.13 TPM= 67.25 Transcript Type= protein_coding
chr9	127815013	127854678	127815013	127854678	-	transcript2965.chr9.nic@ENG	transcript2965.chr9.nic	protein_coding	127854289,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127815943,127815013	127854678,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127815806	Gene ID= ENSG00000106991.13 TPM= 11.27 Transcript Type= NA
chr9	127819238	127854629	127819238	127854629	-	transcript2969.chr9.nic@ENG	transcript2969.chr9.nic	protein_coding	127854289,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819238	127854629,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660	Gene ID= ENSG00000106991.13 TPM= 1.93 Transcript Type= NA
chr9	127818942	127820146	127818942	127820146	-	transcript2980.chr9.nnic@NA	transcript2980.chr9.nnic	NA	127818942	127820146	Gene ID= novel_gene_chr9_2981 TPM= 1.93 Transcript Type= NA
chr9	127866480	127877743	127866480	127877743	-	ENST00000373176.5@AK1	ENST00000373176.5	protein_coding	127877623,127874611,127873026,127872690,127871823,127868321,127866480	127877743,127874649,127873061,127872853,127871939,127868512,127868076	Gene ID= ENSG00000106992.17 TPM= 40.06 Transcript Type= protein_coding
chr9	127867841	127877717	127867841	127877717	-	transcript2989.chr9.nic@AK1	transcript2989.chr9.nic	protein_coding	127877623,127874611,127873026,127872690,127871823,127868321,127867841	127877717,127874649,127873061,127872853,127871939,127868475,127868076	Gene ID= ENSG00000106992.17 TPM= 13.03 Transcript Type= NA
chr9	127885321	127899653	127885321	127899653	-	ENST00000373146.5@ST6GALNAC6	ENST00000373146.5	protein_coding	127899503,127897956,127896242,127894512,127890637,127887484,127885321	127899653,127898010,127896332,127894691,127891043,127887591,127886788	Gene ID= ENSG00000160408.14 TPM= 33.93 Transcript Type= protein_coding
chr9	127885322	127899655	127885322	127899655	-	ENST00000373144.7@ST6GALNAC6	ENST00000373144.7	protein_coding	127899503,127896242,127894512,127890637,127887484,127885322	127899655,127896332,127894691,127891043,127887591,127886788	Gene ID= ENSG00000160408.14 TPM= 32 Transcript Type= protein_coding
chr9	127885322	127899646	127885322	127899646	-	ENST00000373142.5@ST6GALNAC6	ENST00000373142.5	protein_coding	127899503,127897956,127896242,127894512,127890637,127887484,127885322	127899646,127898010,127896332,127894691,127891043,127887591,127886784	Gene ID= ENSG00000160408.14 TPM= 3.38 Transcript Type= protein_coding
chr9	127907886	127917086	127907886	127917086	-	transcript3001.chr9.nnic@ST6GALNAC4	transcript3001.chr9.nnic	protein_coding	127916826,127916408,127914656,127912268,127909951,127908318,127907886	127917086,127916494,127914841,127912680,127910058,127908581,127908168	Gene ID= ENSG00000136840.18 TPM= 16.41 Transcript Type= NA
chr9	127907886	127917026	127907886	127917026	-	ENST00000335791.9@ST6GALNAC4	ENST00000335791.9	protein_coding	127916826,127916408,127914656,127912268,127909951,127907886	127917026,127916494,127914841,127912680,127910058,127908581	Gene ID= ENSG00000136840.18 TPM= 10.62 Transcript Type= protein_coding
chr9	127935099	127937880	127935099	127937880	-	transcript3013.chr9.nnic@DPM2	transcript3013.chr9.nnic	protein_coding	127937818,127936553,127935099	127937880,127936655,127935780	Gene ID= ENSG00000136908.17 TPM= 10.62 Transcript Type= NA
chr9	127935099	127937850	127935099	127937850	-	transcript3016.chr9.nic@DPM2	transcript3016.chr9.nic	protein_coding	127936553,127935099	127937850,127935780	Gene ID= ENSG00000136908.17 TPM= 12.55 Transcript Type= NA
chr9	127935099	127937826	127935099	127937826	-	ENST00000495270.1@DPM2	ENST00000495270.1	protein_coding	127937818,127936553,127935099	127937826,127937523,127935780	Gene ID= ENSG00000136908.17 TPM= 10.62 Transcript Type= retained_intron
chr9	127952707	127980586	127952707	127980586	-	transcript3018.chr9.nnic@FAM102A	transcript3018.chr9.nnic	protein_coding	127979992,127953805,127953575,127952707	127980586,127953925,127953604,127953319	Gene ID= ENSG00000167106.11 TPM= 2.9 Transcript Type= NA
chr9	127978526	127980691	127978526	127980691	-	transcript3022.chr9.nnic@NA	transcript3022.chr9.nnic	NA	127978526	127980691	Gene ID= novel_gene_chr9_3023 TPM= 4.83 Transcript Type= NA
chr9	128061233	128067321	128061233	128067321	-	ENST00000373078.4@NAIF1	ENST00000373078.4	protein_coding	128066591,128061233	128067321,128063900	Gene ID= ENSG00000171169.8 TPM= 2.9 Transcript Type= protein_coding
chr9	128098540	128109244	128098540	128109244	+	transcript3028.chr9.nic@SLC25A25	transcript3028.chr9.nic	protein_coding	128098540,128101096,128101309,128102080,128102370,128103681,128105729,128106150,128106353,128107029,128107260	128098725,128101222,128101396,128102115,128102481,128103839,128105881,128106257,128106520,128107179,128109244	Gene ID= ENSG00000148339.12 TPM= 14.16 Transcript Type= NA
chr9	128098304	128109245	128098304	128109245	+	ENST00000373064.9@SLC25A25	ENST00000373064.9	protein_coding	128098304,128101096,128101309,128102370,128103681,128105729,128106150,128106353,128107029,128107260	128098725,128101222,128101396,128102481,128103839,128105881,128106257,128106520,128107179,128109245	Gene ID= ENSG00000148339.12 TPM= 59.53 Transcript Type= protein_coding
chr9	128068201	128109244	128068201	128109244	+	ENST00000373068.6@SLC25A25	ENST00000373068.6	protein_coding	128068201,128101096,128101309,128102370,128103681,128105729,128106150,128106353,128107029,128107260	128068580,128101222,128101396,128102481,128103839,128105881,128106257,128106520,128107179,128109244	Gene ID= ENSG00000148339.12 TPM= 18.99 Transcript Type= protein_coding
chr9	128120693	128128462	128120693	128128462	-	ENST00000338961.10@PTGES2	ENST00000338961.10	protein_coding	128127439,128125244,128124492,128123702,128122934,128122362,128120693	128128462,128125441,128124550,128123851,128123134,128122479,128121273	Gene ID= ENSG00000148334.14 TPM= 417.69 Transcript Type= protein_coding
chr9	128120693	128127739	128120693	128127739	-	transcript3051.chr9.nic@PTGES2	transcript3051.chr9.nic	protein_coding	128127439,128125244,128124492,128123702,128122362,128120693	128127739,128125441,128124550,128123851,128123134,128121273	Gene ID= ENSG00000148334.14 TPM= 15.32 Transcript Type= NA
chr9	128160260	128163928	128160260	128163928	+	ENST00000372994.1@C9orf16	ENST00000372994.1	protein_coding	128160260,128163443	128160486,128163928	Gene ID= ENSG00000171159.4 TPM= 26.06 Transcript Type= protein_coding
chr9	128166071	128191591	128166071	128191591	-	transcript3059.chr9.nic@CIZ1	transcript3059.chr9.nic	protein_coding	128191432,128190688,128190329,128187863,128185547,128180721,128180415,128178709,128178369,128177566,128176351,128170020,128169623,128169406,128169052,128167095,128166759,128166071	128191591,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178490,128177763,128176475,128170107,128169700,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 14.72 Transcript Type= NA
chr9	128166066	128191589	128166066	128191589	-	ENST00000357558.9@CIZ1	ENST00000357558.9	protein_coding	128191432,128190688,128190329,128187863,128185547,128180721,128180415,128178989,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166066	128191589,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178904,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 5.07 Transcript Type= protein_coding
chr9	128166073	128191589	128166073	128191589	-	ENST00000372938.9@CIZ1	ENST00000372938.9	protein_coding	128191432,128190688,128190329,128187863,128185547,128180721,128180415,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166073	128191589,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 55.02 Transcript Type= protein_coding
chr9	128166065	128191568	128166065	128191568	-	ENST00000372954.5@CIZ1	ENST00000372954.5	protein_coding	128191432,128190688,128190329,128185547,128180721,128180415,128179073,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166065	128191568,128190862,128190444,128185776,128180814,128180523,128179415,128178904,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 16.65 Transcript Type= protein_coding
chr9	128255830	128275951	128255830	128275951	-	transcript3088.chr9.nic@GOLGA2	transcript3088.chr9.nic	protein_coding	128275893,128273850,128272785,128268420,128268117,128267934,128267458,128267194,128266287,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128255830	128275951,128273972,128272865,128268524,128268160,128267997,128267517,128267274,128266325,128266020,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281	Gene ID= ENSG00000167110.17 TPM= 6.76 Transcript Type= NA
chr9	128256515	128275952	128256515	128275952	-	transcript3092.chr9.nic@GOLGA2	transcript3092.chr9.nic	protein_coding	128275893,128273850,128272785,128268420,128268117,128267934,128267458,128266287,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128256515	128275952,128273972,128272865,128268524,128268160,128267997,128267517,128266325,128266020,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281	Gene ID= ENSG00000167110.17 TPM= 3.86 Transcript Type= NA
chr9	128256515	128275960	128256515	128275960	-	transcript3094.chr9.nic@GOLGA2	transcript3094.chr9.nic	protein_coding	128275893,128273850,128272785,128268420,128268117,128267934,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128256515	128275960,128273972,128272865,128268524,128268160,128267997,128267517,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281	Gene ID= ENSG00000167110.17 TPM= 1.93 Transcript Type= NA
chr9	128276244	128288989	128276244	128288989	+	ENST00000418976.1@SWI5	ENST00000418976.1	protein_coding	128276244,128276707,128284510,128285939,128288652	128276402,128276755,128284631,128286033,128288989	Gene ID= ENSG00000175854.11 TPM= 12.55 Transcript Type= protein_coding
chr9	128305161	128322742	128305161	128322742	-	ENST00000372890.5@TRUB2	ENST00000372890.5	protein_coding	128322300,128321599,128317152,128315567,128313808,128311529,128310887,128305161	128322742,128321730,128317226,128315628,128313889,128311601,128311023,128309875	Gene ID= ENSG00000167112.9 TPM= 39.58 Transcript Type= protein_coding
chr9	128322536	128334072	128322536	128334072	+	ENST00000300452.7@COQ4	ENST00000300452.7	protein_coding	128322536,128323016,128325143,128325779,128332153,128332850,128333474	128322928,128323147,128325239,128325881,128332282,128332943,128334072	Gene ID= ENSG00000167113.10 TPM= 27.99 Transcript Type= protein_coding
chr9	128322544	128323586	128322544	128323586	+	ENST00000609948.1@COQ4	ENST00000609948.1	protein_coding	128322544,128323016	128322928,128323586	Gene ID= ENSG00000167113.10 TPM= 8.69 Transcript Type= protein_coding
chr9	128340490	128361217	128340490	128361217	+	transcript3112.chr9.nic@SLC27A4	transcript3112.chr9.nic	protein_coding	128340490,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128355053,128355398,128355650,128360334	128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353541,128355190,128355562,128355796,128361217	Gene ID= ENSG00000167114.12 TPM= 6.76 Transcript Type= NA
chr9	128370661	128371202	128370661	128371202	-	transcript3116.chr9.nnic@NA	transcript3116.chr9.nnic	NA	128370661	128371202	Gene ID= novel_gene_chr9_3117 TPM= 1.93 Transcript Type= NA
chr9	128371319	128392016	128371319	128392016	+	ENST00000372853.8@URM1	ENST00000372853.8	protein_coding	128371319,128378036,128387816,128389261,128389666	128371415,128378106,128387897,128389309,128392016	Gene ID= ENSG00000167118.10 TPM= 27.99 Transcript Type= protein_coding
chr9	128420480	128437347	128420480	128437347	+	ENST00000372838.8@CERCAM	ENST00000372838.8	protein_coding	128420480,128422868,128423146,128424138,128424410,128428302,128428757,128428930,128431171,128434102,128434410,128435653,128436849	128421074,128422978,128423263,128424272,128424614,128428421,128428833,128429036,128431303,128434229,128434613,128435905,128437347	Gene ID= ENSG00000167123.18 TPM= 2.9 Transcript Type= protein_coding
chr9	128456125	128500960	128456125	128500960	+	transcript3125.chr9.nic@ODF2	transcript3125.chr9.nic	protein_coding	128456125,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510,128496041,128498413,128499001,128500067	128456255,128459657,128460666,128461010,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494668,128496297,128498575,128499126,128500960	Gene ID= ENSG00000136811.16 TPM= 1.93 Transcript Type= NA
chr9	128456125	128494836	128456125	128494836	+	transcript3129.chr9.nic@ODF2	transcript3129.chr9.nic	protein_coding	128456125,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510	128456255,128459657,128460666,128461067,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494836	Gene ID= ENSG00000136811.16 TPM= 1.93 Transcript Type= NA
chr9	128504691	128542288	128504691	128542288	+	transcript3131.chr9.nic@GLE1	transcript3131.chr9.nic	protein_coding	128504691,128508876,128515529,128522668,128523280,128523592,128525192,128527179,128527456,128532665,128533513,128533761,128536355,128537986,128539616,128540275,128541102	128504904,128509097,128515639,128522816,128523340,128523846,128525423,128527291,128527525,128532691,128533655,128533951,128536484,128538090,128539698,128540338,128542288	Gene ID= ENSG00000119392.14 TPM= 10.62 Transcript Type= NA
chr9	128504700	128542288	128504700	128542288	+	ENST00000309971.8@GLE1	ENST00000309971.8	protein_coding	128504700,128508876,128515529,128522668,128523280,128523592,128525192,128527179,128527456,128533513,128533761,128536355,128537986,128539616,128540275,128541102	128504904,128509097,128515639,128522816,128523340,128523846,128525423,128527291,128527525,128533655,128533951,128536484,128538090,128539698,128540338,128542288	Gene ID= ENSG00000119392.14 TPM= 21.24 Transcript Type= protein_coding
chr9	128552590	128633658	128552590	128633658	+	ENST00000372739.5@SPTAN1	ENST00000372739.5	protein_coding	128552590,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128592983,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128609651,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209	128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128593042,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128609665,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633658	Gene ID= ENSG00000197694.15 TPM= 7.72 Transcript Type= protein_coding
chr9	128633661	128656732	128633661	128656732	-	transcript3139.chr9.nnic@WDR34	transcript3139.chr9.nnic	protein_coding	128656541,128640691,128636918,128636281,128635658,128635092,128634689,128634226,128633661	128656732,128640939,128637027,128636438,128635767,128635175,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 1.93 Transcript Type= NA
chr9	128633661	128656787	128633661	128656787	-	ENST00000372715.6@WDR34	ENST00000372715.6	protein_coding	128656541,128640691,128636918,128636281,128635658,128635092,128634689,128634226,128633661	128656787,128640939,128637027,128636438,128635767,128635259,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 30.89 Transcript Type= protein_coding
chr9	128633661	128656732	128633661	128656732	-	transcript3143.chr9.nic@WDR34	transcript3143.chr9.nic	protein_coding	128656541,128640691,128636918,128635658,128635092,128634689,128634226,128633661	128656732,128640939,128637027,128636438,128635259,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 1.93 Transcript Type= NA
chr9	128683655	128696400	128683655	128696400	+	ENST00000372692.8@SET	ENST00000372692.8	protein_coding	128683655,128691170,128691858,128692662,128692868,128693638,128693896,128694641	128684007,128691227,128692000,128692765,128692981,128693808,128694042,128696400	Gene ID= ENSG00000119335.16 TPM= 9.17 Transcript Type= protein_coding
chr9	128689259	128695159	128689259	128695159	+	transcript3151.chr9.nnic@SET	transcript3151.chr9.nnic	protein_coding	128689259,128691170,128691858,128692662,128692868,128693896,128694641	128689655,128691227,128692000,128692765,128692981,128694042,128695159	Gene ID= ENSG00000119335.16 TPM= 10.62 Transcript Type= NA
chr9	128689226	128696388	128689226	128696388	+	ENST00000322030.12@SET	ENST00000322030.12	protein_coding	128689226,128691170,128691858,128692662,128692868,128693638,128693896,128694641	128689655,128691227,128692000,128692765,128692981,128693808,128694042,128696388	Gene ID= ENSG00000119335.16 TPM= 32.34 Transcript Type= protein_coding
chr9	128702523	128720918	128702523	128720918	+	ENST00000291906.4@PKN3	ENST00000291906.4	protein_coding	128702523,128705303,128705734,128706713,128706896,128707222,128713052,128713278,128713499,128714046,128714197,128714562,128714798,128715172,128715369,128716747,128718325,128718549,128719686,128719910,128720203,128720394	128702939,128705543,128705879,128706824,128707023,128707405,128713198,128713387,128713642,128714121,128714365,128714664,128714865,128715235,128715460,128716923,128718387,128718625,128719828,128720017,128720283,128720918	Gene ID= ENSG00000160447.6 TPM= 5.79 Transcript Type= protein_coding
chr9	128720869	128724106	128720869	128724106	-	ENST00000372663.8@ZDHHC12	ENST00000372663.8	protein_coding	128723994,128722438,128722009,128721651,128720869	128724106,128722574,128722086,128721817,128721502	Gene ID= ENSG00000160446.18 TPM= 8.69 Transcript Type= protein_coding
chr9	128729786	128771931	128729786	128771931	-	transcript3162.chr9.nnic@ZER1	transcript3162.chr9.nnic	protein_coding	128771158,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729786	128771931,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394	Gene ID= ENSG00000160445.10 TPM= 2.9 Transcript Type= NA
chr9	128729786	128771949	128729786	128771949	-	transcript3164.chr9.nic@ZER1	transcript3164.chr9.nic	protein_coding	128771815,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729786	128771949,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394	Gene ID= ENSG00000160445.10 TPM= 35.07 Transcript Type= NA
chr9	128729786	128771893	128729786	128771893	-	ENST00000291900.6@ZER1	ENST00000291900.6	protein_coding	128771581,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729786	128771893,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394	Gene ID= ENSG00000160445.10 TPM= 55.99 Transcript Type= protein_coding
chr9	128769416	128771932	128769416	128771932	-	transcript3176.chr9.nnic@NA	transcript3176.chr9.nnic	NA	128769416	128771932	Gene ID= novel_gene_chr9_3177 TPM= 2.9 Transcript Type= NA
chr9	128787204	128810432	128787204	128810432	+	ENST00000372648.9@TBC1D13	ENST00000372648.9	protein_coding	128787204,128788334,128790735,128791380,128791594,128792492,128797055,128803250,128803956,128805859,128806254,128807814	128787376,128788407,128790775,128791441,128791693,128792574,128797214,128803460,128804119,128806019,128806311,128810432	Gene ID= ENSG00000107021.15 TPM= 27.51 Transcript Type= protein_coding
chr9	128787253	128810424	128787253	128810424	+	transcript3179.chr9.nnic@TBC1D13	transcript3179.chr9.nnic	protein_coding	128787253,128788334,128790735,128791380,128791594,128792492,128797055,128803250,128803956,128805922,128806254,128807814	128787376,128788407,128790775,128791441,128791693,128792574,128797214,128803460,128804119,128806019,128806311,128810424	Gene ID= ENSG00000107021.15 TPM= 14 Transcript Type= NA
chr9	128818466	128822672	128818466	128822672	+	transcript3196.chr9.nnic@ENDOG	transcript3196.chr9.nnic	protein_coding	128818466,128820739,128821438,128822328	128819185,128820848,128821814,128822672	Gene ID= ENSG00000167136.6 TPM= 4.83 Transcript Type= NA
chr9	128818887	128822676	128818887	128822676	+	transcript3201.chr9.nic@ENDOG	transcript3201.chr9.nic	protein_coding	128818887,128820739	128819185,128822676	Gene ID= ENSG00000167136.6 TPM= 4.83 Transcript Type= NA
chr9	128818474	128822677	128818474	128822677	+	ENST00000372642.4@ENDOG	ENST00000372642.4	protein_coding	128818474,128820739,128822328	128819185,128820848,128822677	Gene ID= ENSG00000167136.6 TPM= 194.99 Transcript Type= protein_coding
chr9	128819651	128829821	128819651	128829821	-	ENST00000361256.9@SPOUT1	ENST00000361256.9	protein_coding	128829745,128829110,128828735,128827032,128826540,128826384,128826022,128824977,128824771,128824072,128823747,128819651	128829821,128829155,128828860,128827191,128826629,128826433,128826152,128825049,128824869,128824174,128823894,128822833	Gene ID= ENSG00000198917.12 TPM= 11.58 Transcript Type= protein_coding
chr9	128819651	128829818	128819651	128829818	-	transcript3192.chr9.nic@SPOUT1	transcript3192.chr9.nic	protein_coding	128829745,128829110,128828735,128827032,128826540,128826022,128824977,128824771,128824072,128823747,128819651	128829818,128829155,128828860,128827191,128826629,128826433,128825049,128824869,128824174,128823894,128822833	Gene ID= ENSG00000198917.12 TPM= 5.79 Transcript Type= NA
chr9	128832942	128882075	128832942	128882075	-	ENST00000436267.6@KYAT1	ENST00000436267.6	protein_coding	128881897,128847433,128846680,128845353,128842654,128838218,128838051,128837685,128836802,128835997,128835779,128835481,128835323,128833740,128832942	128882075,128847643,128846859,128845411,128842801,128838367,128838137,128837813,128836922,128836073,128835868,128835667,128835402,128833826,128833643	Gene ID= ENSG00000171097.13 TPM= 1.45 Transcript Type= protein_coding
chr9	128833113	128882053	128833113	128882053	-	ENST00000302586.7@KYAT1	ENST00000302586.7	protein_coding	128881897,128845353,128842654,128838218,128838051,128837685,128836802,128835997,128835779,128835481,128835323,128833740,128833113	128882053,128845411,128842801,128838367,128838137,128837813,128836922,128836073,128835868,128835667,128835402,128833826,128833643	Gene ID= ENSG00000171097.13 TPM= 3.38 Transcript Type= protein_coding
chr9	128882112	128918039	128882112	128918039	+	ENST00000372600.8@LRRC8A	ENST00000372600.8	protein_coding	128882112,128886015,128907157,128916096	128882250,128886121,128909321,128918039	Gene ID= ENSG00000136802.11 TPM= 36.68 Transcript Type= protein_coding
chr9	128882184	128887596	128882184	128887596	+	transcript3208.chr9.nnic@LRRC8A	transcript3208.chr9.nnic	protein_coding	128882184,128886015,128886886	128882250,128886121,128887596	Gene ID= ENSG00000136802.11 TPM= 1.93 Transcript Type= NA
chr9	128921400	128942038	128921400	128942038	+	transcript3212.chr9.nic@PHYHD1	transcript3212.chr9.nic	protein_coding	128921400,128921930,128922283,128927038,128933782,128934011,128936448,128936583,128937757,128940369,128940599,128941445,128941668	128921601,128922047,128922356,128927196,128933857,128934058,128936503,128936645,128937778,128940497,128940715,128941571,128942038	Gene ID= ENSG00000175287.18 TPM= 6.76 Transcript Type= NA
chr9	128920895	128942037	128920895	128942037	+	ENST00000372592.7@PHYHD1	ENST00000372592.7	protein_coding	128920895,128921930,128922283,128927038,128933782,128934011,128936448,128936583,128937757,128940369,128940599,128941445,128941668	128921668,128922047,128922356,128927196,128933857,128934058,128936503,128936645,128937778,128940497,128940715,128941571,128942037	Gene ID= ENSG00000175287.18 TPM= 8.21 Transcript Type= protein_coding
chr9	128921400	128942038	128921400	128942038	+	transcript3214.chr9.nic@PHYHD1	transcript3214.chr9.nic	protein_coding	128921400,128921930,128922283,128927038,128933782,128934011,128936448,128936583,128937757,128940369,128941445,128941668	128921601,128922047,128922356,128927196,128933857,128934058,128936503,128936645,128937778,128940497,128941571,128942038	Gene ID= ENSG00000175287.18 TPM= 2.41 Transcript Type= NA
chr9	128945530	128947619	128945530	128947619	-	ENST00000372586.3@DOLK	ENST00000372586.3	protein_coding	128945530	128947619	Gene ID= ENSG00000175283.7 TPM= 22.2 Transcript Type= protein_coding
chr9	128947699	129007096	128947699	129007096	+	ENST00000372577.2@NUP188	ENST00000372577.2	protein_coding	128947699,128949189,128952773,128956350,128956952,128958010,128958802,128959015,128968506,128969400,128970758,128973160,128979262,128980606,128981264,128982549,128982902,128983293,128983474,128984900,128986558,128986809,128987589,128988047,128990120,128993197,128993525,128994373,128994856,128995319,128998151,128998538,128999172,128999624,129001529,129001884,129002817,129003317,129005147,129005303,129005645,129006050,129006239,129006502	128947751,128949243,128952846,128956434,128957032,128958054,128958894,128959134,128968717,128969514,128970958,128973249,128979327,128980725,128981390,128982701,128983028,128983380,128983550,128985014,128986678,128986875,128987717,128988186,128990226,128993403,128993694,128994442,128994923,128995514,128998228,128998623,128999317,128999805,129001729,129001976,129002975,129003454,129005221,129005530,129005776,129006123,129006368,129007096	Gene ID= ENSG00000095319.14 TPM= 37.65 Transcript Type= protein_coding
chr9	129008039	129028361	129008039	129028361	-	transcript3242.chr9.nic@SH3GLB2	transcript3242.chr9.nic	protein_coding	129028092,129022282,129021091,129014771,129014411,129010670,129010120,129009771,129009106,129008039	129028361,129022423,129021219,129014904,129014503,129012298,129010209,129009871,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 4.18 Transcript Type= NA
chr9	129007036	129028300	129007036	129028300	-	ENST00000372564.7@SH3GLB2	ENST00000372564.7	protein_coding	129028092,129022282,129021091,129014771,129014411,129012236,129010670,129010120,129009771,129009106,129007036	129028300,129022423,129021219,129014904,129014503,129012298,129010693,129010209,129009871,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 1.93 Transcript Type= protein_coding
chr9	129008039	129028279	129008039	129028279	-	ENST00000372554.8@SH3GLB2	ENST00000372554.8	protein_coding	129028092,129022282,129021091,129014771,129014411,129013008,129012236,129010670,129010120,129009771,129009453,129009106,129008039	129028279,129022423,129021219,129014904,129014503,129013019,129012298,129010693,129010209,129009871,129009467,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 8.69 Transcript Type= protein_coding
chr9	129036614	129072082	129036614	129072082	+	transcript3247.chr9.nnic@MIGA2	transcript3247.chr9.nnic	protein_coding	129036614,129040452,129042304,129048427,129049381,129049827,129059154,129060550,129061231,129063244,129063545,129067773,129068198,129068838,129069076,129069849,129070247	129036681,129040690,129042514,129048539,129049498,129049963,129059271,129060650,129061346,129063316,129063631,129067871,129068332,129068975,129069129,129069965,129072082	Gene ID= ENSG00000148343.18 TPM= 5.15 Transcript Type= NA
chr9	129036614	129072082	129036614	129072082	+	transcript3251.chr9.nic@MIGA2	transcript3251.chr9.nic	protein_coding	129036614,129040452,129042304,129048427,129049381,129049827,129059154,129060550,129061231,129063244,129063545,129067773,129068198,129069076,129069849,129070247	129036681,129040690,129042514,129048539,129049498,129049963,129059271,129060650,129061346,129063316,129063631,129067871,129068332,129069129,129069965,129072082	Gene ID= ENSG00000148343.18 TPM= 27.35 Transcript Type= NA
chr9	129036934	129072082	129036934	129072082	+	ENST00000358369.8@MIGA2	ENST00000358369.8	protein_coding	129036934,129040452,129042304,129048427,129049381,129049827,129059154,129060550,129061231,129063244,129063545,129067773,129068198,129069076,129069849,129070247	129037016,129040690,129042514,129048539,129049498,129049963,129059271,129060650,129061346,129063316,129063631,129067871,129068332,129069129,129069965,129072082	Gene ID= ENSG00000148343.18 TPM= 14.8 Transcript Type= protein_coding
chr9	129081100	129090435	129081100	129090435	+	ENST00000372546.8@DOLPP1	ENST00000372546.8	protein_coding	129081100,129084668,129085023,129085207,129085518,129086139,129086709,129088971	129081207,129084768,129085107,129085306,129085616,129086267,129086798,129090435	Gene ID= ENSG00000167130.17 TPM= 6.76 Transcript Type= protein_coding
chr9	129094794	129110791	129094794	129110791	-	transcript3260.chr9.nic@CRAT	transcript3260.chr9.nic	protein_coding	129110483,129107814,129104188,129103013,129102400,129101883,129100511,129099866,129098531,129098249,129098013,129097250,129096070,129094794	129110791,129108077,129104306,129103066,129102565,129102057,129100689,129099966,129098650,129098371,129098148,129097312,129096135,129095612	Gene ID= ENSG00000095321.16 TPM= 28.8 Transcript Type= NA
chr9	129094810	129110804	129094810	129110804	-	ENST00000318080.6@CRAT	ENST00000318080.6	protein_coding	129110483,129107814,129104188,129103013,129102400,129101883,129100511,129099866,129098531,129098249,129098013,129097250,129095998,129094810	129110804,129108077,129104306,129103066,129102565,129102057,129100689,129099966,129098650,129098371,129098148,129097312,129096135,129095612	Gene ID= ENSG00000095321.16 TPM= 38.45 Transcript Type= protein_coding
chr9	129107334	129110711	129107334	129110711	-	ENST00000393384.3@CRAT	ENST00000393384.3	protein_coding	129110483,129107334	129110711,129108077	Gene ID= ENSG00000095321.16 TPM= 5.79 Transcript Type= protein_coding
chr9	129111314	129148945	129111314	129148945	+	ENST00000337738.5@PTPA	ENST00000337738.5	protein_coding	129111314,129120513,129123052,129127964,129128985,129131522,129134795,129136471,129137592,129142445,129147387	129111631,129120610,129123138,129128068,129129110,129131639,129134894,129136595,129137692,129142552,129148945	Gene ID= ENSG00000119383.19 TPM= 10.14 Transcript Type= protein_coding
chr9	129111318	129148946	129111318	129148946	+	ENST00000393370.6@PTPA	ENST00000393370.6	protein_coding	129111318,129120513,129123052,129128985,129131522,129134795,129136471,129137592,129142445,129147387	129111631,129120610,129123138,129129110,129131639,129134894,129136595,129137692,129142552,129148946	Gene ID= ENSG00000119383.19 TPM= 26.55 Transcript Type= protein_coding
chr9	129111314	129148945	129111314	129148945	+	ENST00000357197.8@PTPA	ENST00000357197.8	protein_coding	129111314,129120513,129128985,129131522,129134795,129136471,129137592,129142445,129147387	129111631,129120610,129129110,129131639,129134894,129136595,129137692,129142552,129148945	Gene ID= ENSG00000119383.19 TPM= 8.21 Transcript Type= protein_coding
chr9	129145745	129148945	129145745	129148945	+	transcript3297.chr9.nnic@NA	transcript3297.chr9.nnic	NA	129145745	129148945	Gene ID= novel_gene_chr9_3298 TPM= 8.21 Transcript Type= NA
chr9	129176659	129178234	129176659	129178234	-	transcript3299.chr9.nnic@NA	transcript3299.chr9.nnic	NA	129176659	129178234	Gene ID= novel_gene_chr9_3300 TPM= 2.9 Transcript Type= NA
chr9	129488858	129503906	129488858	129503906	+	transcript3303.chr9.nic@LINC00963	transcript3303.chr9.nic	processed_transcript	129488858,129493419,129502397,129503323	129489299,129493595,129503139,129503906	Gene ID= ENSG00000204054.13 TPM= 1.93 Transcript Type= NA
chr9	129488623	129504274	129488623	129504274	+	transcript3309.chr9.nic@LINC00963	transcript3309.chr9.nic	processed_transcript	129488623,129493478,129503323	129489299,129493595,129504274	Gene ID= ENSG00000204054.13 TPM= 1.93 Transcript Type= NA
chr9	129488545	129504274	129488545	129504274	+	ENST00000444184.5@LINC00963	ENST00000444184.5	processed_transcript	129488545,129493416,129503323	129489299,129493595,129504274	Gene ID= ENSG00000204054.13 TPM= 1.93 Transcript Type= lincRNA
chr9	129626153	129636131	129626153	129636131	+	ENST00000611055.4@NTMT1	ENST00000611055.4	protein_coding	129626153,129632650,129634054,129635208	129626321,129632865,129634306,129636131	Gene ID= ENSG00000148335.14 TPM= 7.72 Transcript Type= protein_coding
chr9	129636892	129642165	129636892	129642165	-	ENST00000277458.4@ASB6	ENST00000277458.4	protein_coding	129641887,129640541,129639402,129639202,129638573,129636892	129642165,129640722,129639508,129639310,129638659,129638457	Gene ID= ENSG00000148331.11 TPM= 28.96 Transcript Type= protein_coding
chr9	129803153	129811281	129803153	129811281	+	ENST00000259339.6@TOR1B	ENST00000259339.6	protein_coding	129803153,129804073,129807188,129808905,129809342	129803411,129804338,129807363,129809032,129811281	Gene ID= ENSG00000136816.15 TPM= 30.89 Transcript Type= protein_coding
chr9	129812944	129824134	129812944	129824134	-	ENST00000351698.4@TOR1A	ENST00000351698.4	protein_coding	129823908,129822581,129818745,129818520,129812944	129824134,129822846,129818920,129818647,129814222	Gene ID= ENSG00000136827.11 TPM= 15.44 Transcript Type= protein_coding
chr9	129827778	129835291	129827778	129835291	-	transcript3355.chr9.nic@C9orf78	transcript3355.chr9.nic	protein_coding	129835139,129833658,129833447,129831896,129830871,129829405,129829205,129827778	129835291,129833709,129833517,129831973,129831068,129829541,129829303,129828252	Gene ID= ENSG00000136819.15 TPM= 4.83 Transcript Type= NA
chr9	129827290	129835275	129827290	129835275	-	ENST00000372447.7@C9orf78	ENST00000372447.7	protein_coding	129835139,129834707,129833658,129833447,129831896,129830871,129829405,129829205,129827290	129835275,129834766,129833709,129833517,129831973,129831068,129829541,129829303,129828252	Gene ID= ENSG00000136819.15 TPM= 30.89 Transcript Type= protein_coding
chr9	129835409	129881828	129835409	129881828	+	transcript3338.chr9.nic@USP20	transcript3338.chr9.nic	protein_coding	129835409,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129865303,129868005,129868862,129869310,129869672,129870453,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113,129880379	129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129865381,129868449,129869002,129869425,129869844,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129880289,129881828	Gene ID= ENSG00000136878.12 TPM= 4.18 Transcript Type= NA
chr9	129835470	129881828	129835470	129881828	+	ENST00000315480.8@USP20	ENST00000315480.8	protein_coding	129835470,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129865303,129868005,129868862,129869310,129869672,129870453,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113	129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129865381,129868449,129869002,129869425,129869844,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129881828	Gene ID= ENSG00000136878.12 TPM= 7.08 Transcript Type= protein_coding
chr9	129835446	129881838	129835446	129881838	+	ENST00000372429.7@USP20	ENST00000372429.7	protein_coding	129835446,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129865303,129868005,129868862,129869310,129869672,129870453,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113,129880467	129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129865381,129868449,129869002,129869425,129869844,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129880289,129881838	Gene ID= ENSG00000136878.12 TPM= 14.8 Transcript Type= protein_coding
chr9	129895812	130043236	129895812	130043236	-	transcript3362.chr9.nic@FNBP1	transcript3362.chr9.nic	protein_coding	130042952,129994843,129979318,129978465,129958491,129957360,129929567,129927195,129924960,129923844,129915966,129908890,129902869,129900426,129899965,129895812	130043236,129994958,129979374,129978612,129958553,129957464,129929695,129927341,129925157,129923996,129915980,129908999,129903001,129900547,129900101,129895996	Gene ID= ENSG00000187239.16 TPM= 7.72 Transcript Type= NA
chr9	130053913	130130893	130053913	130130893	+	transcript3369.chr9.nic@GPR107	transcript3369.chr9.nic	protein_coding	130053913,130075636,130076412,130077299,130079630,130083565,130086420,130090876,130092248,130099457,130100629,130101106,130104420,130107496,130124915,130127483,130128640	130054073,130075749,130076462,130077378,130079769,130083602,130086476,130090983,130092381,130099532,130100702,130101223,130104550,130107539,130124964,130127566,130130893	Gene ID= ENSG00000148358.19 TPM= 1.93 Transcript Type= NA
chr9	130428317	130434123	130428317	130434123	+	transcript3378.chr9.nic@HMCN2	transcript3378.chr9.nic	protein_coding	130428317,130430284,130431367,130432429,130433348	130429685,130430604,130431486,130432555,130434123	Gene ID= ENSG00000148357.16 TPM= 2.9 Transcript Type= NA
chr9	130265758	130287578	130265758	130287578	+	transcript3379.chr9.nic@HMCN2	transcript3379.chr9.nic	protein_coding	130265758,130284603,130285158	130266137,130284673,130287578	Gene ID= ENSG00000148357.16 TPM= 1.93 Transcript Type= NA
chr9	130444929	130501274	130444929	130501274	+	ENST00000352480.9@ASS1	ENST00000352480.9	protein_coding	130444929,130452224,130454305,130458401,130464111,130466725,130470834,130471485,130476871,130479716,130480385,130489333,130494867,130499505,130500976	130444995,130452333,130454373,130458589,130464167,130466799,130470904,130471515,130476961,130479800,130480449,130489464,130495023,130499570,130501274	Gene ID= ENSG00000130707.17 TPM= 55.51 Transcript Type= protein_coding
chr9	130444988	130501255	130444988	130501255	+	ENST00000372393.7@ASS1	ENST00000372393.7	protein_coding	130444988,130450272,130452224,130454305,130458401,130464111,130466725,130470834,130471485,130476871,130479716,130480385,130489333,130494867,130499505,130500976	130444995,130450333,130452333,130454373,130458589,130464167,130466799,130470904,130471515,130476961,130479800,130480449,130489464,130495023,130499570,130501255	Gene ID= ENSG00000130707.17 TPM= 14 Transcript Type= protein_coding
chr9	130577350	130579461	130577350	130579461	-	transcript3389.chr9.nnic@NA	transcript3389.chr9.nnic	NA	130577350	130579461	Gene ID= novel_gene_chr9_3390 TPM= 1.93 Transcript Type= NA
chr9	130579565	130638352	130579565	130638352	+	transcript3400.chr9.nnic@FUBP3	transcript3400.chr9.nnic	protein_coding	130579565,130595483,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130635999,130637014	130579764,130595588,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130636126,130638352	Gene ID= ENSG00000107164.15 TPM= 10.62 Transcript Type= NA
chr9	130579606	130638352	130579606	130638352	+	ENST00000319725.9@FUBP3	ENST00000319725.9	protein_coding	130579606,130595483,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130634667,130635999,130637014	130579764,130595588,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130634738,130636126,130638352	Gene ID= ENSG00000107164.15 TPM= 19.31 Transcript Type= protein_coding
chr9	130693721	130704861	130693721	130704861	+	ENST00000372358.9@EXOSC2	ENST00000372358.9	protein_coding	130693721,130695492,130697582,130698162,130699329,130700867,130702134,130703053,130703694	130693913,130695593,130697627,130698251,130699394,130700935,130702310,130703181,130704861	Gene ID= ENSG00000130713.15 TPM= 3.86 Transcript Type= protein_coding
chr9	130712924	130714580	130712924	130714580	+	transcript3416.chr9.nnic@NA	transcript3416.chr9.nnic	NA	130712924	130714580	Gene ID= novel_gene_chr9_3417 TPM= 4.83 Transcript Type= NA
chr9	131096542	131123145	131096542	131123145	+	ENST00000247291.7@AIF1L	ENST00000247291.7	protein_coding	131096542,131096802,131111597,131114577,131117756,131120235	131096660,131096863,131111663,131114618,131117918,131123145	Gene ID= ENSG00000126878.12 TPM= 8.69 Transcript Type= protein_coding
chr9	131096551	131123145	131096551	131123145	+	ENST00000372300.5@AIF1L	ENST00000372300.5	protein_coding	131096551,131096802,131111597,131114577,131117756,131120235	131096660,131096863,131111663,131114618,131117847,131123145	Gene ID= ENSG00000126878.12 TPM= 1.93 Transcript Type= protein_coding
chr9	131125586	131234663	131125586	131234663	+	ENST00000411637.6@NUP214	ENST00000411637.6	protein_coding	131125586,131127524,131128332,131129279,131130766,131132596,131133106,131134898,131135940,131139281,131140549,131144280,131146162,131147487,131150324,131150616,131151736,131159383,131162991,131163870,131164061,131174055,131175460,131178311,131187289,131189053,131192208,131195233,131197216,131201647,131215212,131222778,131228160,131230630,131232284,131233454	131125749,131127719,131128483,131129477,131130836,131132659,131133209,131135004,131136006,131139407,131140710,131144754,131146304,131147584,131150410,131150765,131151894,131159486,131163173,131163955,131164144,131174318,131175621,131178410,131187364,131189131,131192292,131195294,131199015,131201717,131215368,131222930,131228331,131230769,131232308,131234663	Gene ID= ENSG00000126883.16 TPM= 15.44 Transcript Type= protein_coding
chr9	131260765	131278069	131260765	131278069	-	transcript3425.chr9.nnic@FAM78A	transcript3425.chr9.nnic	protein_coding	131277548,131275857,131260765	131278069,131276943,131261350	Gene ID= ENSG00000126882.12 TPM= 8.69 Transcript Type= NA
chr9	131289709	131309261	131289709	131309261	+	transcript3430.chr9.nnic@PLPP7	transcript3430.chr9.nnic	protein_coding	131289709,131291111,131307923	131290448,131291179,131309261	Gene ID= ENSG00000160539.4 TPM= 1.93 Transcript Type= NA
chr9	131289720	131293029	131289720	131293029	+	transcript3436.chr9.nnic@PLPP7	transcript3436.chr9.nnic	protein_coding	131289720,131292788	131290448,131293029	Gene ID= ENSG00000160539.4 TPM= 2.9 Transcript Type= NA
chr9	131289694	131309262	131289694	131309262	+	ENST00000372264.3@PLPP7	ENST00000372264.3	protein_coding	131289694,131307923	131290448,131309262	Gene ID= ENSG00000160539.4 TPM= 269.32 Transcript Type= protein_coding
chr9	131289718	131291440	131289718	131291440	+	transcript3439.chr9.nnic@NA	transcript3439.chr9.nnic	NA	131289718	131291440	Gene ID= novel_gene_chr9_3440 TPM= 14.48 Transcript Type= NA
chr9	131489186	131490236	131489186	131490236	-	transcript3448.chr9.nnic@NA	transcript3448.chr9.nnic	NA	131489186	131490236	Gene ID= novel_gene_chr9_3449 TPM= 10.62 Transcript Type= NA
chr9	131502902	131523806	131502902	131523806	+	ENST00000423007.5@POMT1	ENST00000423007.5	protein_coding	131502902,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503313,131504340,131506220,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 6.76 Transcript Type= protein_coding
chr9	131502975	131523798	131502975	131523798	+	transcript3459.chr9.nic@POMT1	transcript3459.chr9.nic	protein_coding	131502975,131506114,131506403,131507368,131508911,131509743,131509903,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131506220,131506453,131507514,131509022,131509808,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523798	Gene ID= ENSG00000130714.15 TPM= 9.91 Transcript Type= NA
chr9	131502902	131523806	131502902	131523806	+	ENST00000404875.6@POMT1	ENST00000404875.6	protein_coding	131502902,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 11.58 Transcript Type= protein_coding
chr9	131502929	131523794	131502929	131523794	+	transcript3469.chr9.nnic@POMT1	transcript3469.chr9.nnic	protein_coding	131502929,131519389,131520080,131521346,131522047,131522932,131523347	131503623,131519486,131520193,131521472,131522224,131523170,131523794	Gene ID= ENSG00000130714.15 TPM= 1.93 Transcript Type= NA
chr9	131502925	131523806	131502925	131523806	+	ENST00000372228.7@POMT1	ENST00000372228.7	protein_coding	131502925,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131504340,131506220,131506453,131507514,131509022,131509808,131510062,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 9.33 Transcript Type= protein_coding
chr9	131502944	131523806	131502944	131523806	+	ENST00000402686.7@POMT1	ENST00000402686.7	protein_coding	131502944,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131504340,131506220,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 9.65 Transcript Type= protein_coding
chr9	131518219	131523806	131518219	131523806	+	ENST00000372220.4@POMT1	ENST00000372220.4	protein_coding	131518219,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131518353,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 13.58 Transcript Type= protein_coding
chr9	131523801	131531289	131523801	131531289	-	transcript3470.chr9.nnic@UCK1	transcript3470.chr9.nnic	protein_coding	131531067,131530486,131529488,131529128,131528944,131525929,131523801	131531289,131530645,131529584,131529201,131529038,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 4.9 Transcript Type= NA
chr9	131523801	131531268	131523801	131531268	-	ENST00000372215.4@UCK1	ENST00000372215.4	protein_coding	131531067,131530486,131529488,131529128,131528944,131525929,131523801	131531268,131530645,131529584,131529270,131529038,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 131.69 Transcript Type= protein_coding
chr9	131523801	131531259	131523801	131531259	-	ENST00000372208.7@UCK1	ENST00000372208.7	protein_coding	131531067,131530486,131529488,131529128,131525929,131523801	131531259,131530645,131529584,131529270,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 1.77 Transcript Type= protein_coding
chr9	131523801	131531200	131523801	131531200	-	ENST00000372211.7@UCK1	ENST00000372211.7	protein_coding	131531094,131530486,131529488,131529128,131528944,131525929,131523801	131531200,131530687,131529584,131529270,131529038,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 3.3 Transcript Type= protein_coding
chr9	131576778	131740117	131576778	131740117	-	transcript3490.chr9.nnic@RAPGEF1	transcript3490.chr9.nnic	protein_coding	131739770,131650810,131643239,131638635,131630236,131629102,131628549,131627913,131625922,131621796,131619051,131604931,131603961,131602061,131598199,131596298,131592099,131589886,131588801,131587942,131587736,131584518,131584311,131582605,131580263,131576778	131740117,131650949,131643417,131638791,131630324,131629254,131628672,131628096,131626422,131621998,131619209,131605188,131604053,131602149,131598310,131596373,131592183,131589978,131588986,131588026,131587830,131584596,131584412,131582702,131580391,131579647	Gene ID= ENSG00000107263.18 TPM= 150.59 Transcript Type= NA
chr9	131649201	131740117	131649201	131740117	-	transcript3501.chr9.nic@RAPGEF1	transcript3501.chr9.nic	protein_coding	131739770,131649201	131740117,131650949	Gene ID= ENSG00000107263.18 TPM= 2.9 Transcript Type= NA
chr9	131576770	131740074	131576770	131740074	-	ENST00000372195.5@RAPGEF1	ENST00000372195.5	protein_coding	131739770,131650810,131650129,131643239,131638635,131630236,131629102,131628549,131627913,131625922,131621796,131602061,131598199,131596298,131592099,131589886,131588801,131587942,131587736,131584518,131584311,131582605,131580263,131576770	131740074,131650949,131650242,131643417,131638791,131630324,131629254,131628672,131628096,131626422,131621998,131602149,131598310,131596373,131592183,131589978,131588986,131588026,131587830,131584596,131584412,131582702,131580391,131579647	Gene ID= ENSG00000107263.18 TPM= 143.83 Transcript Type= protein_coding
chr9	131646233	131648230	131646233	131648230	+	transcript3502.chr9.nnic@NA	transcript3502.chr9.nnic	NA	131646233	131648230	Gene ID= novel_gene_chr9_3503 TPM= 2.9 Transcript Type= NA
chr9	131860107	132079908	131860107	132079908	-	ENST00000292035.9@MED27	ENST00000292035.9	protein_coding	132079642,132077442,132014337,131939381,131893885,131884058,131863063,131860107	132079908,132077586,132014467,131939474,131893992,131884099,131863140,131860672	Gene ID= ENSG00000160563.13 TPM= 13.51 Transcript Type= protein_coding
chr9	131860107	132079866	131860107	132079866	-	ENST00000357028.6@MED27	ENST00000357028.6	protein_coding	132079642,132077442,132014337,131939381,131884058,131863063,131860107	132079866,132077586,132014467,131939474,131884099,131863140,131860672	Gene ID= ENSG00000160563.13 TPM= 2.9 Transcript Type= protein_coding
chr9	131865215	131867992	131865215	131867992	-	transcript3509.chr9.nnic@NA	transcript3509.chr9.nnic	NA	131865215	131867992	Gene ID= novel_gene_chr9_3510 TPM= 1.93 Transcript Type= NA
chr9	132328207	132354963	132328207	132354963	-	transcript3514.chr9.nic@SETX	transcript3514.chr9.nic	protein_coding	132354917,132353649,132349252,132346261,132342690,132336296,132334608,132331277,132331052,132328207	132354963,132353755,132349435,132346471,132342799,132336515,132334727,132331448,132331139,132330499	Gene ID= ENSG00000107290.13 TPM= 1.93 Transcript Type= NA
chr9	132261439	132264652	132261439	132264652	-	transcript3516.chr9.nnic@NA	transcript3516.chr9.nnic	NA	132261439	132264652	Gene ID= novel_gene_chr9_3517 TPM= 3.86 Transcript Type= NA
chr9	132375548	132401878	132375548	132401878	-	transcript3518.chr9.nic@TTF1	transcript3518.chr9.nic	protein_coding	132401455,132400035,132398141,132396433,132392076,132390597,132388139,132386556,132379059,132375548	132401878,132400258,132398326,132396511,132392206,132390831,132388228,132386621,132379144,132376168	Gene ID= ENSG00000125482.12 TPM= 4.34 Transcript Type= NA
chr9	132375548	132406851	132375548	132406851	-	ENST00000612514.4@TTF1	ENST00000612514.4	protein_coding	132406790,132400035,132398141,132396433,132392076,132390597,132388139,132386556,132379059,132375548	132406851,132400258,132398326,132396511,132392206,132390831,132388228,132386621,132379144,132376168	Gene ID= ENSG00000125482.12 TPM= 2.9 Transcript Type= protein_coding
chr9	132375621	132406822	132375621	132406822	-	ENST00000334270.2@TTF1	ENST00000334270.2	protein_coding	132406790,132401455,132400035,132398141,132396433,132392076,132390597,132388139,132386556,132379059,132375621	132406822,132402828,132400258,132398326,132396511,132392206,132390831,132388228,132386621,132379144,132376168	Gene ID= ENSG00000125482.12 TPM= 4.34 Transcript Type= protein_coding
chr9	132401809	132406832	132401809	132406832	-	transcript3522.chr9.nic@TTF1	transcript3522.chr9.nic	protein_coding	132406790,132401809	132406832,132402828	Gene ID= ENSG00000125482.12 TPM= 1.93 Transcript Type= NA
chr9	132402001	132406832	132402001	132406832	-	transcript3523.chr9.nic@TTF1	transcript3523.chr9.nic	protein_coding	132406790,132402001	132406832,132402828	Gene ID= ENSG00000125482.12 TPM= 2.9 Transcript Type= NA
chr9	132658081	132670401	132658081	132670401	-	ENST00000480876.2@DDX31	ENST00000480876.2	protein_coding	132669860,132662439,132662261,132661208,132659710,132658671,132658081	132670401,132662695,132662336,132661251,132659780,132658735,132658358	Gene ID= ENSG00000125485.17 TPM= 1.45 Transcript Type= protein_coding
chr9	132594386	132670027	132594386	132670027	-	ENST00000438527.7@DDX31	ENST00000438527.7	protein_coding	132669860,132662439,132662261,132661208,132659710,132658671,132652448,132651075,132650234,132648432,132648189,132646823,132645895,132642004,132632041,132630264,132625664,132618330,132612087,132594386	132670027,132662695,132662336,132661251,132659780,132658735,132652492,132651116,132650298,132648551,132648295,132647058,132646071,132642063,132632091,132630403,132625745,132618441,132612255,132595112	Gene ID= ENSG00000125485.17 TPM= 2.41 Transcript Type= protein_coding
chr9	132670035	132694955	132670035	132694955	+	ENST00000372146.4@GTF3C4	ENST00000372146.4	protein_coding	132670035,132677977,132683563,132687239,132688881	132670955,132679803,132683693,132687327,132694955	Gene ID= ENSG00000125484.11 TPM= 3.86 Transcript Type= protein_coding
chr9	132891348	132944621	132891348	132944621	-	ENST00000298552.7@TSC1	ENST00000298552.7	protein_coding	132944543,132935033,132928767,132927201,132925587,132923348,132921819,132921363,132912282,132911453,132911002,132910571,132907301,132906731,132905581,132904411,132903651,132902605,132901589,132900715,132897423,132897184,132891348	132944621,132935095,132928952,132927304,132925739,132923492,132921973,132921436,132912457,132911568,132911113,132910692,132907370,132906835,132906139,132904454,132903817,132902787,132901699,132900837,132897610,132897345,132896754	Gene ID= ENSG00000165699.13 TPM= 28.96 Transcript Type= protein_coding
chr9	132909811	132944595	132909811	132944595	-	ENST00000493467.5@TSC1	ENST00000493467.5	protein_coding	132944543,132935033,132928767,132927201,132925587,132923348,132921819,132921363,132912282,132911453,132911002,132909811	132944595,132935095,132928952,132927304,132925739,132923492,132921973,132921436,132912457,132911568,132911113,132910692	Gene ID= ENSG00000165699.13 TPM= 2.9 Transcript Type= retained_intron
chr9	133030739	133058503	133030739	133058503	+	transcript3544.chr9.nic@GTF3C5	transcript3544.chr9.nic	protein_coding	133030739,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133054944,133056766,133057814	133031164,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133056094,133056908,133058503	Gene ID= ENSG00000148308.17 TPM= 8.21 Transcript Type= NA
chr9	133030733	133058503	133030733	133058503	+	transcript3546.chr9.nic@GTF3C5	transcript3546.chr9.nic	protein_coding	133030733,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133056012,133056766,133057814	133030910,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133056094,133056908,133058503	Gene ID= ENSG00000148308.17 TPM= 11.1 Transcript Type= NA
chr9	133030689	133058503	133030689	133058503	+	ENST00000372097.9@GTF3C5	ENST00000372097.9	protein_coding	133030689,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133056012,133056766,133057814	133031164,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133056094,133056908,133058503	Gene ID= ENSG00000148308.17 TPM= 47.3 Transcript Type= protein_coding
chr9	133097720	133149441	133097720	133149441	-	transcript3550.chr9.nic@RALGDS	transcript3550.chr9.nic	protein_coding	133148963,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133101520,133100268,133097720	133149441,133112152,133110489,133109685,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762	Gene ID= ENSG00000160271.14 TPM= 7.56 Transcript Type= NA
chr9	133097723	133129401	133097723	133129401	-	ENST00000393157.7@RALGDS	ENST00000393157.7	protein_coding	133129139,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133101520,133100268,133097723	133129401,133112152,133110489,133109721,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762	Gene ID= ENSG00000160271.14 TPM= 5.15 Transcript Type= protein_coding
chr9	133097720	133121176	133097720	133121176	-	ENST00000372050.7@RALGDS	ENST00000372050.7	protein_coding	133120972,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133101520,133100268,133097720	133121176,133112152,133110489,133109721,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762	Gene ID= ENSG00000160271.14 TPM= 4.66 Transcript Type= protein_coding
chr9	133152953	133163919	133152953	133163919	-	ENST00000372043.7@GBGT1	ENST00000372043.7	protein_coding	133163754,133162342,133161467,133156015,133155901,133155178,133152953	133163919,133162532,133161532,133156065,133155936,133155312,133154242	Gene ID= ENSG00000148288.11 TPM= 1.93 Transcript Type= protein_coding
chr9	133152953	133163945	133152953	133163945	-	ENST00000372040.7@GBGT1	ENST00000372040.7	protein_coding	133163754,133162342,133161467,133156015,133155901,133155178,133152953	133163945,133162532,133161532,133156065,133155936,133155312,133154261	Gene ID= ENSG00000148288.11 TPM= 3.86 Transcript Type= protein_coding
chr9	133328774	133336398	133328774	133336398	-	ENST00000372022.5@SURF6	ENST00000372022.5	protein_coding	133336039,133334392,133333718,133332548,133328774	133336398,133334601,133333806,133332760,133332348	Gene ID= ENSG00000148296.6 TPM= 4.83 Transcript Type= protein_coding
chr9	133340905	133348117	133340905	133348117	-	ENST00000343730.9@MED22	ENST00000343730.9	protein_coding	133347922,133346540,133345172,133344125,133340905	133348117,133346700,133345252,133344333,133341694	Gene ID= ENSG00000148297.15 TPM= 7.72 Transcript Type= protein_coding
chr9	133340905	133348117	133340905	133348117	-	ENST00000610888.4@MED22	ENST00000610888.4	protein_coding	133347922,133346540,133345172,133340905	133348117,133346700,133345252,133344333	Gene ID= ENSG00000148297.15 TPM= 16.41 Transcript Type= protein_coding
chr9	133348214	133351426	133348214	133351426	+	ENST00000323345.10@RPL7A	ENST00000323345.10	protein_coding	133348214,133348922,133349551,133349912,133350240,133350597,133351002,133351262	133348246,133349042,133349700,133350052,133350319,133350727,133351071,133351426	Gene ID= ENSG00000148303.16 TPM= 436.32 Transcript Type= protein_coding
chr9	133351755	133356485	133351755	133356485	-	ENST00000371974.7@SURF1	ENST00000371974.7	protein_coding	133356400,133356269,133354824,133354659,133353749,133352694,133352446,133352061,133351755	133356485,133356320,133354957,133354741,133353940,133352766,133352608,133352142,133351982	Gene ID= ENSG00000148290.9 TPM= 64.19 Transcript Type= protein_coding
chr9	133351805	133356485	133351805	133356485	-	ENST00000615505.4@SURF1	ENST00000615505.4	protein_coding	133356400,133354824,133354659,133353749,133352694,133352446,133352061,133351805	133356485,133354957,133354741,133353940,133352766,133352608,133352142,133351982	Gene ID= ENSG00000148290.9 TPM= 30.41 Transcript Type= protein_coding
chr9	133356540	133361169	133356540	133361169	+	transcript3591.chr9.nic@SURF2	transcript3591.chr9.nic	protein_coding	133356540,133356914,133357711,133359950,133360265,133361056	133356670,133357182,133357814,133360129,133360434,133361169	Gene ID= ENSG00000148291.9 TPM= 4.83 Transcript Type= NA
chr9	133356540	133361169	133356540	133361169	+	transcript3592.chr9.nic@SURF2	transcript3592.chr9.nic	protein_coding	133356540,133356914,133357711,133359950,133360265,133361056	133356670,133357234,133357814,133360129,133360434,133361169	Gene ID= ENSG00000148291.9 TPM= 3.86 Transcript Type= NA
chr9	133356552	133361169	133356552	133361169	+	ENST00000371964.4@SURF2	ENST00000371964.4	protein_coding	133356552,133356914,133357711,133359950,133360265,133361056	133356670,133357068,133357814,133360129,133360434,133361169	Gene ID= ENSG00000148291.9 TPM= 22.2 Transcript Type= protein_coding
chr9	133361450	133376166	133361450	133376166	-	ENST00000618229.4@SURF4	ENST00000618229.4	protein_coding	133375922,133375239,133367259,133366599,133365985,133364840,133361450	133376166,133375388,133367445,133366675,133366028,133365026,133363759	Gene ID= ENSG00000148248.13 TPM= 12.07 Transcript Type= protein_coding
chr9	133361450	133376166	133361450	133376166	-	ENST00000545297.5@SURF4	ENST00000545297.5	protein_coding	133375922,133367259,133366599,133365985,133361450	133376166,133367445,133366675,133366028,133363759	Gene ID= ENSG00000148248.13 TPM= 9.65 Transcript Type= protein_coding
chr9	133361449	133376099	133361449	133376099	-	ENST00000371989.7@SURF4	ENST00000371989.7	protein_coding	133375922,133367259,133366599,133365985,133364840,133361449	133376099,133367445,133366675,133366028,133365026,133363759	Gene ID= ENSG00000148248.13 TPM= 138.04 Transcript Type= protein_coding
chr9	133406062	133418044	133406062	133418044	-	ENST00000371942.7@REXO4	ENST00000371942.7	protein_coding	133417620,133414665,133412778,133412299,133410985,133408768,133407807,133406062	133418044,133415011,133412921,133412492,133411073,133408842,133407881,133407072	Gene ID= ENSG00000148300.11 TPM= 56.95 Transcript Type= protein_coding
chr9	133406059	133418096	133406059	133418096	-	ENST00000371935.6@REXO4	ENST00000371935.6	protein_coding	133417620,133414665,133410985,133408768,133407807,133406059	133418096,133414833,133411073,133408842,133407881,133407072	Gene ID= ENSG00000148300.11 TPM= 3.86 Transcript Type= protein_coding
chr9	133459967	133470848	133459967	133470848	+	ENST00000291722.11@CACFD1	ENST00000291722.11	protein_coding	133459967,133463483,133467921,133468563	133460187,133463555,133468028,133470848	Gene ID= ENSG00000160325.14 TPM= 4.34 Transcript Type= protein_coding
chr9	133463344	133470763	133463344	133470763	+	transcript3633.chr9.nic@CACFD1	transcript3633.chr9.nic	protein_coding	133463344,133465322,133467921,133468563	133463555,133465447,133468028,133470763	Gene ID= ENSG00000160325.14 TPM= 4.34 Transcript Type= NA
chr9	133471215	133479136	133471215	133479136	-	transcript3627.chr9.nic@SLC2A6	transcript3627.chr9.nic	protein_coding	133478968,133478254,133477035,133476237,133475400,133474961,133473415,133473105,133471215	133479136,133478416,133477241,133476336,133475611,133475113,133474088,133473250,133472176	Gene ID= ENSG00000160326.13 TPM= 1.93 Transcript Type= NA
chr9	133471095	133479096	133471095	133479096	-	ENST00000371897.8@SLC2A6	ENST00000371897.8	protein_coding	133478968,133478254,133477035,133476237,133475400,133474961,133473980,133473105,133471095	133479096,133478416,133477241,133476336,133475611,133475113,133474088,133473250,133472176	Gene ID= ENSG00000160326.13 TPM= 4.83 Transcript Type= protein_coding
chr9	133475933	133479121	133475933	133479121	-	transcript3635.chr9.nnic@NA	transcript3635.chr9.nnic	NA	133475933	133479121	Gene ID= novel_gene_chr9_3636 TPM= 1.93 Transcript Type= NA
chr9	134025439	134031585	134025439	134031585	+	ENST00000603928.2@LINC00094	ENST00000603928.2	protein_coding	134025439,134025845,134026208	134025536,134026090,134031585	Gene ID= ENSG00000235106.9 TPM= 7.72 Transcript Type= protein_coding
chr9	134032869	134068021	134032869	134068021	-	transcript3637.chr9.nnic@BRD3	transcript3637.chr9.nnic	protein_coding	134067945,134053265,134052306,134051562,134050374,134049676,134048083,134045293,134041760,134040034,134036032,134034701,134032869	134068021,134053590,134052443,134051709,134050588,134049757,134048454,134045421,134041951,134040269,134036324,134034829,134033705	Gene ID= ENSG00000169925.16 TPM= 16.41 Transcript Type= NA
chr9	134063591	134065449	134063591	134065449	+	transcript3643.chr9.nnic@NA	transcript3643.chr9.nnic	NA	134063591	134065449	Gene ID= novel_gene_chr9_3644 TPM= 1.93 Transcript Type= NA
chr9	134136088	134159968	134136088	134159968	+	ENST00000358625.3@WDR5	ENST00000358625.3	protein_coding	134136088,134139820,134140703,134141510,134141949,134142333,134142636,134148288,134151983,134154466,134155340,134155693,134156506,134157893	134136200,134139958,134140811,134141583,134142038,134142422,134142719,134148343,134152029,134154541,134155373,134155767,134156593,134159968	Gene ID= ENSG00000196363.9 TPM= 12.55 Transcript Type= protein_coding
chr9	134326580	134437019	134326580	134437019	+	ENST00000481739.1@RXRA	ENST00000481739.1	protein_coding	134326580,134401632,134408149,134408940,134417158,134421676,134429108,134431905,134434102,134436467	134326659,134401882,134408299,134409119,134417327,134421805,134429240,134431996,134434207,134437019	Gene ID= ENSG00000186350.9 TPM= 15.44 Transcript Type= protein_coding
chr9	134402053	134406243	134402053	134406243	+	transcript3671.chr9.nnic@NA	transcript3671.chr9.nnic	NA	134402053	134406243	Gene ID= novel_gene_chr9_3672 TPM= 5.79 Transcript Type= NA
chr9	134422345	134425314	134422345	134425314	+	transcript3675.chr9.nnic@NA	transcript3675.chr9.nnic	NA	134422345	134425314	Gene ID= novel_gene_chr9_3676 TPM= 1.93 Transcript Type= NA
chr9	134437152	134439877	134437152	134439877	+	transcript3673.chr9.nnic@NA	transcript3673.chr9.nnic	NA	134437152	134439877	Gene ID= novel_gene_chr9_3674 TPM= 13.51 Transcript Type= NA
chr9	135075520	135121178	135075520	135121178	+	ENST00000252854.8@OLFM1	ENST00000252854.8	protein_coding	135075520,135090195,135095864,135098286,135106749,135119504	135075802,135090344,135096019,135098505,135106855,135121178	Gene ID= ENSG00000130558.19 TPM= 13.51 Transcript Type= protein_coding
chr9	135087674	135098065	135087674	135098065	+	ENST00000392991.8@OLFM1	ENST00000392991.8	protein_coding	135087674,135090195,135095864,135097781	135088139,135090344,135096019,135098065	Gene ID= ENSG00000130558.19 TPM= 4.83 Transcript Type= protein_coding
chr9	135479802	135488893	135479802	135488893	+	ENST00000356818.6@PPP1R26	ENST00000356818.6	protein_coding	135479802,135482683,135483950,135484449	135480022,135482815,135484082,135488893	Gene ID= ENSG00000196422.10 TPM= 8.69 Transcript Type= protein_coding
chr9	135500631	135504672	135500631	135504672	+	ENST00000241600.9@MRPS2	ENST00000241600.9	protein_coding	135500631,135500998,135501844,135503542	135500753,135501123,135501973,135504672	Gene ID= ENSG00000122140.10 TPM= 120.66 Transcript Type= protein_coding
chr9	135932969	135961411	135932969	135961411	-	transcript3734.chr9.nic@UBAC1	transcript3734.chr9.nic	protein_coding	135961025,135955295,135953680,135947798,135946269,135945028,135939673,135938222,135932969	135961411,135955415,135953753,135947905,135946371,135945997,135939759,135938360,135933515	Gene ID= ENSG00000130560.8 TPM= 15.44 Transcript Type= NA
chr9	135932969	135961380	135932969	135961380	-	ENST00000371756.3@UBAC1	ENST00000371756.3	protein_coding	135961025,135955295,135953680,135947798,135946269,135945889,135945028,135939673,135938222,135932969	135961380,135955415,135953753,135947905,135946371,135945997,135945250,135939759,135938360,135933515	Gene ID= ENSG00000130560.8 TPM= 667.03 Transcript Type= protein_coding
chr9	136114588	136118629	136114588	136118629	-	transcript3755.chr9.nnic@TMEM250	transcript3755.chr9.nnic	protein_coding	136117973,136114588	136118629,136117024	Gene ID= ENSG00000238227.7 TPM= 48.1 Transcript Type= NA
chr9	136114581	136118863	136114581	136118863	-	ENST00000418388.5@TMEM250	ENST00000418388.5	protein_coding	136118485,136114581	136118863,136117024	Gene ID= ENSG00000238227.7 TPM= 126.29 Transcript Type= protein_coding
chr9	136114589	136118534	136114589	136118534	-	ENST00000557985.2@TMEM250	ENST00000557985.2	protein_coding	136118485,136115456,136114589	136118534,136117024,136114950	Gene ID= ENSG00000238227.7 TPM= 10.94 Transcript Type= nonsense_mediated_decay
chr9	136361900	136363789	136361900	136363789	-	ENST00000371738.3@DNLZ	ENST00000371738.3	protein_coding	136363487,136362989,136361900	136363789,136363128,136362180	Gene ID= ENSG00000213221.4 TPM= 32.82 Transcript Type= protein_coding
chr9	136363342	136364021	136363342	136364021	+	transcript3766.chr9.nnic@NA	transcript3766.chr9.nnic	NA	136363342	136364021	Gene ID= novel_gene_chr9_3767 TPM= 8.69 Transcript Type= NA
chr9	136375577	136400215	136375577	136400215	-	transcript3769.chr9.nnic@SNAPC4	transcript3769.chr9.nnic	protein_coding	136400134,136398299,136396977,136395603,136395298,136394800,136394249,136392673,136392522,136391942,136388444,136387742,136387485,136384720,136383953,136383186,136382253,136381824,136381322,136380740,136379837,136377543,136376349,136375577	136400215,136398441,136397023,136395770,136395423,136394878,136394330,136392777,136392594,136392106,136388591,136387848,136387579,136384814,136384032,136383668,136382336,136382073,136381392,136380850,136379864,136379299,136376481,136375800	Gene ID= ENSG00000165684.4 TPM= 10.62 Transcript Type= NA
chr9	136401922	136410612	136401922	136410612	-	transcript3773.chr9.nic@SDCCAG3	transcript3773.chr9.nic	protein_coding	136410328,136408999,136407826,136407145,136405905,136405091,136404631,136404055,136401922	136410612,136409067,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 4.34 Transcript Type= NA
chr9	136401925	136410609	136401925	136410609	-	ENST00000298537.11@SDCCAG3	ENST00000298537.11	protein_coding	136410328,136410090,136407826,136407145,136405905,136405091,136404631,136404055,136401925	136410609,136410239,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 1.45 Transcript Type= protein_coding
chr9	136401922	136410561	136401922	136410561	-	transcript3777.chr9.nic@SDCCAG3	transcript3777.chr9.nic	protein_coding	136410328,136407826,136406946,136405905,136405091,136404631,136404055,136401922	136410561,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 2.09 Transcript Type= NA
chr9	136401922	136410628	136401922	136410628	-	transcript3780.chr9.nic@SDCCAG3	transcript3780.chr9.nic	protein_coding	136410328,136407826,136407145,136405905,136405118,136404631,136404055,136401922	136410628,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 3.06 Transcript Type= NA
chr9	136401925	136410628	136401925	136410628	-	transcript3782.chr9.nnic@SDCCAG3	transcript3782.chr9.nnic	protein_coding	136410328,136407826,136407145,136405905,136405091,136404631,136404055,136401925	136410628,136407938,136407561,136405978,136405202,136404693,136404194,136402946	Gene ID= ENSG00000165689.16 TPM= 2.09 Transcript Type= NA
chr9	136406783	136410628	136406783	136410628	-	transcript3790.chr9.nic@SDCCAG3	transcript3790.chr9.nic	protein_coding	136410328,136407826,136406783	136410628,136407938,136407561	Gene ID= ENSG00000165689.16 TPM= 1.93 Transcript Type= NA
chr9	136401951	136410600	136401951	136410600	-	ENST00000371725.7@SDCCAG3	ENST00000371725.7	protein_coding	136410328,136407826,136407145,136405905,136405091,136404631,136404055,136401951	136410600,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 14.48 Transcript Type= protein_coding
chr9	136401922	136410527	136401922	136410527	-	ENST00000357365.7@SDCCAG3	ENST00000357365.7	protein_coding	136410328,136410090,136408999,136407826,136407145,136405905,136405091,136404631,136404055,136401922	136410527,136410239,136409067,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 1.45 Transcript Type= protein_coding
chr9	136410570	136423761	136410570	136423761	+	ENST00000371717.7@PMPCA	ENST00000371717.7	protein_coding	136410570,136411997,136412490,136412810,136414553,136416291,136416951,136418017,136418555,136418828,136419044,136421832,136423095	136410739,136412199,136412569,136412892,136414647,136416391,136417214,136418109,136418673,136418918,136419106,136421976,136423761	Gene ID= ENSG00000165688.11 TPM= 147.69 Transcript Type= protein_coding
chr9	136410635	136423761	136410635	136423761	+	transcript3795.chr9.nic@PMPCA	transcript3795.chr9.nic	protein_coding	136410635,136411997,136412490,136412810,136414553,136416291,136418017,136418555,136418828,136419044,136421832,136423095	136410739,136412199,136412569,136412892,136414647,136417214,136418109,136418673,136418918,136419106,136421976,136423761	Gene ID= ENSG00000165688.11 TPM= 15.44 Transcript Type= NA
chr9	136428619	136439822	136428619	136439822	-	ENST00000371712.3@INPP5E	ENST00000371712.3	protein_coding	136438608,136434740,136434037,136433155,136432956,136432479,136431824,136431002,136430277,136428619	136439822,136434863,136434134,136433279,136433075,136432586,136431985,136431117,136430413,136429807	Gene ID= ENSG00000148384.12 TPM= 32.34 Transcript Type= protein_coding
chr9	136437328	136439864	136437328	136439864	-	transcript3807.chr9.nnic@NA	transcript3807.chr9.nnic	NA	136437328	136439864	Gene ID= novel_gene_chr9_3808 TPM= 4.34 Transcript Type= NA
chr9	136658856	136672678	136658856	136672678	+	ENST00000371699.5@EGFL7	ENST00000371699.5	protein_coding	136658856,136664692,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136659630,136664785,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 4.38 Transcript Type= protein_coding
chr9	136662917	136672678	136662917	136672678	+	transcript3818.chr9.nic@EGFL7	transcript3818.chr9.nic	protein_coding	136662917,136664692,136668241,136668557,136669606,136670169,136670950,136671926,136672264	136663108,136664785,136668362,136668673,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 4.46 Transcript Type= NA
chr9	136662917	136672678	136662917	136672678	+	transcript3819.chr9.nnic@EGFL7	transcript3819.chr9.nnic	protein_coding	136662917,136664692,136668241,136668557,136669914,136670169,136670950,136671926,136672264	136663108,136664785,136668362,136668673,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 4.46 Transcript Type= NA
chr9	136662915	136672678	136662915	136672678	+	transcript3821.chr9.nic@EGFL7	transcript3821.chr9.nic	protein_coding	136662915,136664692,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136663108,136664785,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 3.74 Transcript Type= NA
chr9	136671140	136672678	136671140	136672678	+	transcript3834.chr9.nnic@EGFL7	transcript3834.chr9.nnic	protein_coding	136671140,136671293,136672264	136671240,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 5.43 Transcript Type= NA
chr9	136662930	136672678	136662930	136672678	+	ENST00000406555.7@EGFL7	ENST00000406555.7	protein_coding	136662930,136664692,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136663108,136664785,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 45.24 Transcript Type= protein_coding
chr9	136665792	136672678	136665792	136672678	+	ENST00000371698.3@EGFL7	ENST00000371698.3	protein_coding	136665792,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136665817,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 8.56 Transcript Type= protein_coding
chr9	136673143	136687423	136673143	136687423	-	ENST00000371696.6@AGPAT2	ENST00000371696.6	protein_coding	136687176,136677423,136676961,136676585,136674735,136673143	136687423,136677556,136677136,136676680,136674807,136673927	Gene ID= ENSG00000169692.12 TPM= 166.35 Transcript Type= protein_coding
chr9	136673143	136687398	136673143	136687398	-	ENST00000371694.7@AGPAT2	ENST00000371694.7	protein_coding	136687176,136677423,136676961,136674735,136673143	136687398,136677556,136677136,136674807,136673927	Gene ID= ENSG00000169692.12 TPM= 14.8 Transcript Type= protein_coding
chr9	136712570	136724050	136712570	136724050	+	ENST00000371692.8@FAM69B	ENST00000371692.8	protein_coding	136712570,136717577,136721921,136722125,136722962	136712728,136717711,136722028,136722301,136724050	Gene ID= ENSG00000165716.10 TPM= 2.9 Transcript Type= protein_coding
chr9	136721351	136728185	136721351	136728185	-	transcript3847.chr9.nic@SNHG7	transcript3847.chr9.nic	antisense_RNA	136727881,136727046,136726311,136725055,136721351	136728185,136727086,136726416,136725110,136724000	Gene ID= ENSG00000233016.6 TPM= 4.83 Transcript Type= NA
chr9	136724658	136728184	136724658	136728184	-	ENST00000416970.5@SNHG7	ENST00000416970.5	antisense_RNA	136727881,136727046,136726311,136725055,136724658	136728184,136727086,136726416,136725110,136724939	Gene ID= ENSG00000233016.6 TPM= 4.83 Transcript Type= antisense_RNA
chr9	136724359	136728185	136724359	136728185	-	transcript3850.chr9.nic@SNHG7	transcript3850.chr9.nic	antisense_RNA	136727881,136727046,136726311,136724359	136728185,136727086,136726416,136725110	Gene ID= ENSG00000233016.6 TPM= 8.69 Transcript Type= NA
chr9	136724658	136728185	136724658	136728185	-	transcript3855.chr9.nic@SNHG7	transcript3855.chr9.nic	antisense_RNA	136727881,136726311,136724658	136728185,136727086,136725110	Gene ID= ENSG00000233016.6 TPM= 2.9 Transcript Type= NA
chr9	136791336	136793257	136791336	136793257	+	transcript3867.chr9.nnic@TMEM141	transcript3867.chr9.nnic	protein_coding	136791336,136791711,136792251,136792819	136791424,136791777,136792358,136793257	Gene ID= ENSG00000244187.7 TPM= 2.9 Transcript Type= NA
chr9	136791368	136793256	136791368	136793256	+	ENST00000465017.5@TMEM141	ENST00000465017.5	protein_coding	136791368,136791626,136791947,136792251,136792819	136791424,136791777,136792030,136792358,136793256	Gene ID= ENSG00000244187.7 TPM= 3.86 Transcript Type= processed_transcript
chr9	136791355	136793257	136791355	136793257	+	ENST00000290079.8@TMEM141	ENST00000290079.8	protein_coding	136791355,136791711,136791947,136792251,136792819	136791424,136791777,136792030,136792358,136793257	Gene ID= ENSG00000244187.7 TPM= 9.65 Transcript Type= protein_coding
chr9	136791372	136793256	136791372	136793256	+	ENST00000483187.5@TMEM141	ENST00000483187.5	protein_coding	136791372,136791947,136792251,136792819	136791424,136792030,136792358,136793256	Gene ID= ENSG00000244187.7 TPM= 4.83 Transcript Type= processed_transcript
chr9	136807904	136840185	136807904	136840185	+	transcript3872.chr9.nic@RABL6	transcript3872.chr9.nic	protein_coding	136807904,136823525,136825779,136828494,136829393,136831721,136832265,136835742,136837346,136837862,136838909,136839222,136839694,136840154	136808326,136823659,136825826,136828546,136829484,136831861,136832370,136835845,136837662,136838015,136839121,136839486,136839865,136840185	Gene ID= ENSG00000196642.18 TPM= 67.57 Transcript Type= NA
chr9	136847948	136851024	136847948	136851024	+	transcript3879.chr9.nnic@PHPT1	transcript3879.chr9.nnic	protein_coding	136847948,136849111,136850013,136850506,136850755	136848283,136849590,136850137,136850560,136851024	Gene ID= ENSG00000054148.17 TPM= 6.76 Transcript Type= NA
chr9	136847948	136851022	136847948	136851022	+	transcript3882.chr9.nnic@PHPT1	transcript3882.chr9.nnic	protein_coding	136847948,136849111,136850013,136850755	136848283,136849590,136850137,136851022	Gene ID= ENSG00000054148.17 TPM= 51.48 Transcript Type= NA
chr9	136849094	136851022	136849094	136851022	+	ENST00000247665.11@PHPT1	ENST00000247665.11	protein_coding	136849094,136850013,136850755	136849590,136850137,136851022	Gene ID= ENSG00000054148.17 TPM= 65.96 Transcript Type= protein_coding
chr9	136849779	136851022	136849779	136851022	+	ENST00000463215.1@PHPT1	ENST00000463215.1	protein_coding	136849779,136850755	136850137,136851022	Gene ID= ENSG00000054148.17 TPM= 18.34 Transcript Type= processed_transcript
chr9	136849770	136851021	136849770	136851021	+	transcript3888.chr9.nnic@NA	transcript3888.chr9.nnic	NA	136849770	136851021	Gene ID= novel_gene_chr9_3889 TPM= 1.93 Transcript Type= NA
chr9	136862119	136866286	136862119	136866286	-	ENST00000224073.5@EDF1	ENST00000224073.5	protein_coding	136866181,136863820,136863288,136862906,136862119	136866286,136863871,136863448,136862999,136862345	Gene ID= ENSG00000107223.12 TPM= 242.94 Transcript Type= protein_coding
chr9	136862119	136866285	136862119	136866285	-	ENST00000371649.5@EDF1	ENST00000371649.5	protein_coding	136866181,136863820,136863288,136862906,136862119	136866285,136863871,136863448,136862999,136862496	Gene ID= ENSG00000107223.12 TPM= 23.81 Transcript Type= protein_coding
chr9	136886518	136926607	136886518	136926607	+	ENST00000247668.6@TRAF2	ENST00000247668.6	protein_coding	136886518,136898713,136899594,136900422,136908070,136909920,136916541,136920234,136921038,136923852,136925683	136886541,136898928,136899672,136900520,136908231,136909994,136916615,136920515,136921215,136924000,136926607	Gene ID= ENSG00000127191.17 TPM= 30.89 Transcript Type= protein_coding
chr9	136889221	136891349	136889221	136891349	-	transcript3901.chr9.nnic@NA	transcript3901.chr9.nnic	NA	136889221	136891349	Gene ID= novel_gene_chr9_3902 TPM= 3.86 Transcript Type= NA
chr9	136914532	136917928	136914532	136917928	-	transcript3903.chr9.nnic@NA	transcript3903.chr9.nnic	NA	136914532	136917928	Gene ID= novel_gene_chr9_3904 TPM= 1.93 Transcript Type= NA
chr9	136940435	136944705	136940435	136944705	-	transcript3906.chr9.nnic@FBXW5	transcript3906.chr9.nnic	protein_coding	136944594,136943891,136943349,136942769,136942547,136942046,136941537,136941251,136940601,136940435	136944705,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171,136940462	Gene ID= ENSG00000159069.13 TPM= 31.56 Transcript Type= NA
chr9	136940435	136944696	136940435	136944696	-	transcript3929.chr9.nic@FBXW5	transcript3929.chr9.nic	protein_coding	136944594,136943891,136943349,136942769,136942547,136942100,136941537,136941251,136940435	136944696,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 118.3 Transcript Type= NA
chr9	136940435	136944711	136940435	136944711	-	transcript3961.chr9.nic@FBXW5	transcript3961.chr9.nic	protein_coding	136944594,136943891,136943349,136942769,136942547,136942046,136941251,136940435	136944711,136944106,136943506,136942943,136942695,136942466,136941684,136941171	Gene ID= ENSG00000159069.13 TPM= 33.1 Transcript Type= NA
chr9	136940435	136944650	136940435	136944650	-	ENST00000325285.7@FBXW5	ENST00000325285.7	protein_coding	136944594,136943891,136943349,136942769,136942547,136942046,136941537,136941251,136940435	136944650,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 859.44 Transcript Type= protein_coding
chr9	136940435	136944688	136940435	136944688	-	ENST00000483559.5@FBXW5	ENST00000483559.5	protein_coding	136944594,136943891,136943349,136942769,136942046,136941537,136941251,136940435	136944688,136944106,136943506,136942943,136942695,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 25.41 Transcript Type= retained_intron
chr9	136940435	136944696	136940435	136944696	-	ENST00000459905.5@FBXW5	ENST00000459905.5	protein_coding	136944594,136943891,136943349,136942547,136942100,136941537,136941251,136940435	136944696,136944106,136943506,136942943,136942466,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 12.9 Transcript Type= retained_intron
chr9	136977505	136981738	136977505	136981738	+	ENST00000371625.7@PTGDS	ENST00000371625.7	protein_coding	136977505,136978993,136979223,136979946,136980183,136980833,136981579	136977692,136979132,136979299,136980062,136980284,136980855,136981738	Gene ID= ENSG00000107317.12 TPM= 20.27 Transcript Type= protein_coding
chr9	136992403	136993976	136992403	136993976	+	transcript4005.chr9.nic@PAXX	transcript4005.chr9.nic	protein_coding	136992403,136992640,136992925,136993343,136993580,136993766	136992562,136992700,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 3.28 Transcript Type= NA
chr9	136992403	136993976	136992403	136993976	+	transcript4006.chr9.nnic@PAXX	transcript4006.chr9.nnic	protein_coding	136992403,136992640,136993053,136993343,136993580,136993766	136992562,136992704,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 2.32 Transcript Type= NA
chr9	136992805	136993976	136992805	136993976	+	transcript4008.chr9.nic@PAXX	transcript4008.chr9.nic	protein_coding	136992805,136993053,136993343,136993580,136993766	136992974,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 2.32 Transcript Type= NA
chr9	136992403	136993976	136992403	136993976	+	transcript4009.chr9.nic@PAXX	transcript4009.chr9.nic	protein_coding	136992403,136993343,136993580,136993766	136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 2.9 Transcript Type= NA
chr9	136992418	136993976	136992418	136993976	+	ENST00000371620.3@PAXX	ENST00000371620.3	protein_coding	136992418,136992640,136992925,136993053,136993343,136993580,136993766	136992562,136992700,136992974,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 3.28 Transcript Type= protein_coding
chr9	136992463	136993984	136992463	136993984	+	ENST00000498095.4@PAXX	ENST00000498095.4	protein_coding	136992463,136992640,136993343,136993580,136993766	136992562,136993243,136993411,136993664,136993984	Gene ID= ENSG00000148362.10 TPM= 4.25 Transcript Type= retained_intron
chr9	136994635	136996803	136994635	136996803	-	ENST00000494426.1@CLIC3	ENST00000494426.1	protein_coding	136996511,136995648,136995442,136995186,136994930,136994635	136996803,136995757,136995567,136995292,136995105,136994839	Gene ID= ENSG00000169583.12 TPM= 1.93 Transcript Type= protein_coding
chr9	137039470	137046188	137039470	137046188	-	transcript4015.chr9.nnic@NPDC1	transcript4015.chr9.nnic	protein_coding	137042927,137041062,137040814,137040671,137040514,137040357,137039971,137039470	137046188,137041187,137040984,137040737,137040598,137040436,137040155,137039864	Gene ID= ENSG00000107281.9 TPM= 6.76 Transcript Type= NA
chr9	137039470	137046203	137039470	137046203	-	ENST00000371601.4@NPDC1	ENST00000371601.4	protein_coding	137045878,137042927,137041062,137040814,137040671,137040514,137040357,137039971,137039470	137046203,137043073,137041187,137040984,137040737,137040598,137040436,137040067,137039864	Gene ID= ENSG00000107281.9 TPM= 35.72 Transcript Type= protein_coding
chr9	137084946	137086817	137084946	137086817	-	ENST00000596585.3@MAN1B1-AS1	ENST00000596585.3	antisense_RNA	137084946	137086817	Gene ID= ENSG00000268996.3 TPM= 6.76 Transcript Type= antisense_RNA
chr9	137086927	137109187	137086927	137109187	+	ENST00000371589.8@MAN1B1	ENST00000371589.8	protein_coding	137086927,137088075,137088869,137096237,137097828,137099696,137101005,137101484,137106125,137106689,137107250,137107531,137108388	137087218,137088183,137089005,137096391,137097937,137099881,137101153,137101672,137106315,137106809,137107447,137107662,137109187	Gene ID= ENSG00000177239.14 TPM= 29.92 Transcript Type= protein_coding
chr9	137104426	137109181	137104426	137109181	+	ENST00000480100.3@MAN1B1	ENST00000480100.3	protein_coding	137104426,137107275,137107531,137108388	137106809,137107447,137107662,137109181	Gene ID= ENSG00000177239.14 TPM= 1.93 Transcript Type= retained_intron
chr9	137110546	137114757	137110546	137114757	-	transcript4028.chr9.nic@DPP7	transcript4028.chr9.nic	protein_coding	137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111941,137111690,137110880,137110546	137114757,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 9.83 Transcript Type= NA
chr9	137110546	137114757	137110546	137114757	-	transcript4031.chr9.nic@DPP7	transcript4031.chr9.nic	protein_coding	137114463,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111873,137111690,137110880,137110546	137114757,137114382,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 6.93 Transcript Type= NA
chr9	137110546	137114757	137110546	137114757	-	transcript4032.chr9.nic@DPP7	transcript4032.chr9.nic	protein_coding	137114647,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111873,137111690,137110880,137110546	137114757,137114576,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 3.07 Transcript Type= NA
chr9	137110546	137114757	137110546	137114757	-	transcript4034.chr9.nnic@DPP7	transcript4034.chr9.nnic	protein_coding	137114647,137114463,137114243,137113865,137113361,137112953,137112745,137112112,137111873,137111690,137110880,137110546	137114757,137114576,137114382,137114028,137113496,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 4.04 Transcript Type= NA
chr9	137110546	137114757	137110546	137114757	-	transcript4035.chr9.nic@DPP7	transcript4035.chr9.nic	protein_coding	137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112112,137111873,137111690,137110880,137110546	137114757,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 10.28 Transcript Type= NA
chr9	137110546	137114757	137110546	137114757	-	transcript4038.chr9.nic@DPP7	transcript4038.chr9.nic	protein_coding	137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112112,137111941,137111690,137110880,137110546	137114757,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 5.97 Transcript Type= NA
chr9	137110546	137114757	137110546	137114757	-	transcript4040.chr9.nic@DPP7	transcript4040.chr9.nic	protein_coding	137114463,137114243,137113865,137113361,137113206,137112953,137112112,137111873,137111690,137110880,137110546	137114757,137114382,137114028,137113496,137113287,137113119,137112805,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 10.28 Transcript Type= NA
chr9	137110546	137114757	137110546	137114757	-	transcript4059.chr9.nic@DPP7	transcript4059.chr9.nic	protein_coding	137114463,137114243,137113865,137113206,137112953,137111690,137110880,137110546	137114757,137114382,137114028,137113496,137113119,137112805,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 3.94 Transcript Type= NA
chr9	137110542	137114718	137110542	137114718	-	ENST00000371579.6@DPP7	ENST00000371579.6	protein_coding	137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111873,137111690,137110880,137110542	137114718,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 51.34 Transcript Type= protein_coding
chr9	137128687	137129771	137128687	137129771	-	transcript4062.chr9.nnic@NA	transcript4062.chr9.nnic	NA	137128687	137129771	Gene ID= novel_gene_chr9_4063 TPM= 7.72 Transcript Type= NA
chr9	137174786	137188558	137174786	137188558	-	transcript4065.chr9.nic@ANAPC2	transcript4065.chr9.nic	protein_coding	137188416,137187481,137186224,137184913,137183672,137183125,137181681,137180788,137180452,137180181,137175708,137174786	137188558,137188103,137186356,137185087,137183791,137183242,137181862,137180929,137180527,137180384,137175837,137175472	Gene ID= ENSG00000176248.8 TPM= 2.9 Transcript Type= NA
chr9	137174784	137188537	137174784	137188537	-	ENST00000323927.2@ANAPC2	ENST00000323927.2	protein_coding	137188416,137187481,137186224,137184913,137183672,137183125,137181681,137180788,137180452,137180181,137175708,137175237,137174784	137188537,137188103,137186356,137185087,137183791,137183242,137181862,137180929,137180527,137180384,137175837,137175472,137175154	Gene ID= ENSG00000176248.8 TPM= 7.72 Transcript Type= protein_coding
chr9	137188635	137190364	137188635	137190364	+	transcript4072.chr9.nnic@NA	transcript4072.chr9.nnic	NA	137188635	137190364	Gene ID= novel_gene_chr9_4073 TPM= 6.76 Transcript Type= NA
chr9	137188660	137190370	137188660	137190370	+	ENST00000459860.1@SSNA1	ENST00000459860.1	protein_coding	137188660,137189807	137189265,137190370	Gene ID= ENSG00000176101.11 TPM= 72.4 Transcript Type= retained_intron
chr9	137188647	137190370	137188647	137190370	+	ENST00000322310.9@SSNA1	ENST00000322310.9	protein_coding	137188647,137189066,137189807	137188778,137189265,137190370	Gene ID= ENSG00000176101.11 TPM= 64.68 Transcript Type= protein_coding
chr9	137191617	137200798	137191617	137200798	-	ENST00000409012.4@TPRN	ENST00000409012.4	protein_coding	137198987,137192451,137192259,137191617	137200798,137192691,137192365,137192174	Gene ID= ENSG00000176058.11 TPM= 8.69 Transcript Type= protein_coding
chr9	137191617	137205653	137191617	137205653	-	transcript4076.chr9.nnic@TPRN	transcript4076.chr9.nnic	protein_coding	137203897,137192451,137192259,137191617	137205653,137192691,137192365,137192174	Gene ID= ENSG00000176058.11 TPM= 3.86 Transcript Type= NA
chr9	137191617	137205653	137191617	137205653	-	transcript4077.chr9.nic@TPRN	transcript4077.chr9.nic	protein_coding	137204104,137192451,137192259,137191617	137205653,137192691,137192365,137192174	Gene ID= ENSG00000176058.11 TPM= 13.51 Transcript Type= NA
chr9	137204082	137205638	137204082	137205638	-	ENST00000343666.5@TMEM203	ENST00000343666.5	protein_coding	137204082	137205638	Gene ID= ENSG00000187713.6 TPM= 98.46 Transcript Type= protein_coding
chr9	137220253	137221441	137220253	137221441	-	transcript4079.chr9.nnic@NA	transcript4079.chr9.nnic	NA	137220253	137221441	Gene ID= novel_gene_chr9_4080 TPM= 8.69 Transcript Type= NA
chr9	137241213	137243707	137241213	137243707	+	ENST00000340384.4@TUBB4B	ENST00000340384.4	protein_coding	137241213,137241721,137241911,137242496	137241417,137241829,137242021,137243707	Gene ID= ENSG00000188229.5 TPM= 611.04 Transcript Type= protein_coding
chr9	137255173	137273546	137255173	137273546	+	ENST00000343053.4@NELFB	ENST00000343053.4	protein_coding	137255173,137255907,137256329,137256824,137263037,137264245,137265877,137266331,137266944,137267240,137272081,137272507,137272782	137255611,137256070,137256428,137257054,137263222,137264357,137265979,137266426,137267086,137267346,137272222,137272615,137273546	Gene ID= ENSG00000188986.6 TPM= 134.26 Transcript Type= protein_coding
chr9	137300482	137302251	137300482	137302251	-	ENST00000356628.3@NRARP	ENST00000356628.3	protein_coding	137300482	137302251	Gene ID= ENSG00000198435.3 TPM= 1.93 Transcript Type= protein_coding
chr9	137306905	137423262	137306905	137423262	-	ENST00000340951.8@EXD3	ENST00000340951.8	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366493,137356268,137354700,137354339,137352620,137352066,137351318,137351038,137349369,137349110,137348071,137324090,137323725,137309607,137307608,137306905	137423262,137395404,137383377,137373599,137373072,137367989,137366632,137356368,137354773,137354377,137352786,137352201,137351528,137351147,137349531,137349282,137348238,137324143,137323856,137309700,137307646,137307263	Gene ID= ENSG00000187609.15 TPM= 9.65 Transcript Type= protein_coding
chr9	137306905	137423262	137306905	137423262	-	transcript4103.chr9.nnic@EXD3	transcript4103.chr9.nnic	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366493,137356268,137354700,137354339,137352620,137352066,137351318,137351038,137349369,137349110,137348071,137324090,137323725,137309607,137307608,137306905	137423262,137395404,137383377,137373599,137373072,137367989,137366632,137356368,137354773,137354377,137352786,137352201,137351528,137351147,137349531,137349282,137348238,137324143,137323856,137309790,137307646,137307263	Gene ID= ENSG00000187609.15 TPM= 3.86 Transcript Type= NA
chr9	137306896	137423171	137306896	137423171	-	transcript4104.chr9.nic@EXD3	transcript4104.chr9.nic	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366493,137356268,137354700,137354339,137352620,137352066,137351318,137351038,137349369,137349110,137348071,137324090,137323725,137309607,137306896	137423171,137395404,137383377,137373599,137373072,137367989,137366632,137356368,137354773,137354377,137352786,137352201,137351528,137351147,137349531,137349282,137348238,137324143,137323856,137309700,137307263	Gene ID= ENSG00000187609.15 TPM= 2.9 Transcript Type= NA
chr9	137391802	137423162	137391802	137423162	-	ENST00000465160.2@EXD3	ENST00000465160.2	protein_coding	137423114,137395303,137391802	137423162,137395404,137393235	Gene ID= ENSG00000187609.15 TPM= 3.86 Transcript Type= protein_coding
chr9	137448225	137459576	137448225	137459576	-	transcript4126.chr9.nic@NSMF	transcript4126.chr9.nic	protein_coding	137459032,137458488,137457407,137455239,137454391,137453731,137453056,137452736,137452553,137452365,137450176,137449923,137449599,137448225	137459576,137458549,137457901,137456486,137454443,137453820,137453180,137452819,137452586,137452435,137450255,137450025,137449674,137449491	Gene ID= ENSG00000165802.22 TPM= 3.86 Transcript Type= NA
chr9	137448232	137459334	137448232	137459334	-	ENST00000265663.12@NSMF	ENST00000265663.12	protein_coding	137459032,137458488,137457407,137456411,137455239,137454391,137453731,137453056,137452736,137452553,137452365,137450176,137449923,137449599,137448232	137459334,137458549,137457901,137456486,137455307,137454443,137453820,137453180,137452819,137452586,137452435,137450255,137450025,137449674,137449491	Gene ID= ENSG00000165802.22 TPM= 9.65 Transcript Type= protein_coding
chr9	137459953	137550534	137459953	137550534	-	ENST00000406427.5@PNPLA7	ENST00000406427.5	protein_coding	137550168,137547585,137547309,137546830,137543724,137543432,137542642,137540642,137522729,137521636,137519917,137515379,137505983,137505614,137501650,137500691,137498114,137497187,137495033,137493013,137484587,137480960,137480312,137479056,137478034,137467317,137464340,137464126,137463415,137462685,137462179,137461931,137461536,137460634,137459953	137550534,137547659,137547396,137546909,137543815,137543572,137542801,137540722,137522857,137521716,137520043,137515519,137506083,137505760,137501727,137500896,137498245,137497310,137495146,137493082,137484736,137481023,137480480,137479238,137478152,137467473,137464456,137464195,137463531,137462833,137462331,137462041,137461620,137460737,137460476	Gene ID= ENSG00000130653.15 TPM= 11.58 Transcript Type= protein_coding
chr9	137459953	137478560	137459953	137478560	-	transcript4134.chr9.nic@PNPLA7	transcript4134.chr9.nic	protein_coding	137478034,137467317,137464340,137464126,137463415,137462685,137462179,137461931,137461536,137459953	137478560,137467473,137464456,137464195,137463531,137462833,137462331,137462041,137461620,137460737	Gene ID= ENSG00000130653.15 TPM= 1.93 Transcript Type= NA
chr9	137551199	137552555	137551199	137552555	+	ENST00000371443.5@MRPL41	ENST00000371443.5	protein_coding	137551199,137552074	137551978,137552555	Gene ID= ENSG00000182154.7 TPM= 336.89 Transcript Type= protein_coding
chr9	137554904	137578935	137554904	137578935	-	transcript4139.chr9.nic@DPH7	transcript4139.chr9.nic	protein_coding	137578625,137577470,137576309,137576080,137574752,137574208,137565085,137564893,137564434,137554904	137578935,137577603,137576402,137576167,137574843,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 3.21 Transcript Type= NA
chr9	137554904	137578935	137554904	137578935	-	transcript4140.chr9.nic@DPH7	transcript4140.chr9.nic	protein_coding	137578625,137577470,137576309,137575709,137574752,137574208,137565085,137564893,137564434,137554904	137578935,137577603,137576402,137576167,137574846,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 4.18 Transcript Type= NA
chr9	137554897	137578866	137554897	137578866	-	transcript4144.chr9.nnic@DPH7	transcript4144.chr9.nnic	protein_coding	137578625,137577470,137576080,137574752,137574208,137565085,137564893,137564434,137554897	137578866,137577603,137576167,137574843,137574380,137565154,137564958,137564606,137556864	Gene ID= ENSG00000148399.12 TPM= 3.86 Transcript Type= NA
chr9	137554904	137578935	137554904	137578935	-	transcript4146.chr9.nic@DPH7	transcript4146.chr9.nic	protein_coding	137578625,137577470,137575709,137574752,137574208,137565085,137564893,137564434,137554904	137578935,137577603,137576167,137574846,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 3.21 Transcript Type= NA
chr9	137554904	137578921	137554904	137578921	-	transcript4149.chr9.nic@DPH7	transcript4149.chr9.nic	protein_coding	137578625,137576080,137574752,137574208,137565085,137564893,137564434,137554904	137578921,137576167,137574843,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 3.21 Transcript Type= NA
chr9	137554904	137578935	137554904	137578935	-	transcript4151.chr9.nic@DPH7	transcript4151.chr9.nic	protein_coding	137578625,137577470,137576080,137574752,137574208,137565085,137564434,137554904	137578935,137577603,137576167,137574843,137574380,137565154,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 4.18 Transcript Type= NA
chr9	137554909	137578935	137554909	137578935	-	ENST00000277540.6@DPH7	ENST00000277540.6	protein_coding	137578625,137577470,137576080,137574752,137574208,137565085,137564893,137564434,137554909	137578935,137577603,137576167,137574843,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 5.15 Transcript Type= protein_coding
chr9	137574600	137577064	137574600	137577064	+	transcript4158.chr9.nnic@NA	transcript4158.chr9.nnic	NA	137574600	137577064	Gene ID= novel_gene_chr9_4159 TPM= 2.9 Transcript Type= NA
chr9	137579656	137583269	137579656	137583269	-	transcript4169.chr9.nnic@NA	transcript4169.chr9.nnic	NA	137579656	137583269	Gene ID= novel_gene_chr9_4170 TPM= 22.2 Transcript Type= NA
chr9	137582079	137590490	137582079	137590490	-	ENST00000298585.2@ZMYND19	ENST00000298585.2	protein_coding	137590213,137588659,137587717,137586967,137582983,137582079	137590490,137588718,137587823,137587107,137583163,137582686	Gene ID= ENSG00000165724.5 TPM= 27.03 Transcript Type= protein_coding
chr9	137582172	137585023	137582172	137585023	+	transcript4167.chr9.nnic@NA	transcript4167.chr9.nnic	NA	137582172	137585023	Gene ID= novel_gene_chr9_4168 TPM= 3.86 Transcript Type= NA
chr9	137605641	137615358	137605641	137615358	+	transcript4171.chr9.nic@ARRDC1	transcript4171.chr9.nic	protein_coding	137605641,137612896,137613413,137613615,137614032,137614299,137614559,137615074	137605835,137613006,137613510,137613769,137614214,137614475,137615000,137615358	Gene ID= ENSG00000197070.13 TPM= 4.51 Transcript Type= NA
chr9	137605641	137615359	137605641	137615359	+	transcript4176.chr9.nic@ARRDC1	transcript4176.chr9.nic	protein_coding	137605641,137612896,137613460,137613615,137614032,137614299,137614559	137605835,137613006,137613510,137613769,137614214,137614475,137615359	Gene ID= ENSG00000197070.13 TPM= 5.47 Transcript Type= NA
chr9	137605654	137615358	137605654	137615358	+	ENST00000371421.8@ARRDC1	ENST00000371421.8	protein_coding	137605654,137612896,137613460,137613615,137614032,137614299,137614559,137615074	137605835,137613006,137613510,137613769,137614214,137614475,137615000,137615358	Gene ID= ENSG00000197070.13 TPM= 11.27 Transcript Type= protein_coding
chr9	137615332	137618813	137615332	137618813	-	ENST00000371417.3@ARRDC1-AS1	ENST00000371417.3	antisense_RNA	137618531,137617934,137615332	137618813,137618191,137616199	Gene ID= ENSG00000203993.4 TPM= 26.06 Transcript Type= antisense_RNA
chr9	137617564	137618886	137617564	137618886	-	transcript4183.chr9.nnic@NA	transcript4183.chr9.nnic	NA	137617564	137618886	Gene ID= novel_gene_chr9_4184 TPM= 1.93 Transcript Type= NA
chr9	137618963	137836127	137618963	137836127	+	ENST00000460843.5@EHMT1	ENST00000460843.5	protein_coding	137618963,137710967,137716626,137728349,137743371,137743902,137752331,137754171,137757880,137762675,137775109,137776618,137777882,137779635,137782291,137790848,137798813,137800880,137811461,137813006,137813386,137814431,137815947,137817439,137818060,137834349,137834773	137619049,137711030,137717182,137728529,137743528,137744090,137752408,137754291,137758011,137762820,137775252,137776844,137778055,137779717,137782397,137790970,137798914,137800984,137811615,137813173,137813530,137814508,137816062,137817525,137818138,137834524,137836127	Gene ID= ENSG00000181090.20 TPM= 21.24 Transcript Type= protein_coding
chr9	137618963	137764776	137618963	137764776	+	transcript4204.chr9.nic@EHMT1	transcript4204.chr9.nic	protein_coding	137618963,137710967,137716626,137728349,137743371,137743902,137752331,137754171,137757880,137762675,137764127	137619049,137711030,137717182,137728529,137743528,137744090,137752408,137754291,137758011,137762820,137764776	Gene ID= ENSG00000181090.20 TPM= 4.83 Transcript Type= NA
chr9	137743048	137764776	137743048	137764776	+	transcript4212.chr9.nic@EHMT1	transcript4212.chr9.nic	protein_coding	137743048,137743392,137743902,137752331,137754171,137757880,137762675,137764127	137743100,137743528,137744090,137752408,137754291,137758011,137762820,137764776	Gene ID= ENSG00000181090.20 TPM= 1.93 Transcript Type= NA
chr10	134728	254634	134728	254634	+	transcript3.chr10.nic@ZMYND11	transcript3.chr10.nic	protein_coding	134728,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	134892,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 3.93 Transcript Type= NA
chr10	135342	254634	135342	254634	+	transcript9.chr10.nic@ZMYND11	transcript9.chr10.nic	protein_coding	135342,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135559,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 32.41 Transcript Type= NA
chr10	134711	254634	134711	254634	+	transcript10.chr10.nic@ZMYND11	transcript10.chr10.nic	protein_coding	134711,179994,209889,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	134786,180128,210048,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 3.93 Transcript Type= NA
chr10	134866	254634	134866	254634	+	transcript15.chr10.nic@ZMYND11	transcript15.chr10.nic	protein_coding	134866,179994,209889,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135302,180128,210048,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 13.58 Transcript Type= NA
chr10	134995	254634	134995	254634	+	transcript16.chr10.nnic@ZMYND11	transcript16.chr10.nnic	protein_coding	134995,179994,209889,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135203,180128,210048,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 4.89 Transcript Type= NA
chr10	134484	254626	134484	254626	+	ENST00000397959.7@ZMYND11	ENST00000397959.7	protein_coding	134484,179994,209889,236838,239438,240056,240893,242021,246766,247398,248336,248903,252348	134892,180128,210048,236915,239525,240111,240970,242139,246973,247466,248608,249088,254626	Gene ID= ENSG00000015171.19 TPM= 3.16 Transcript Type= protein_coding
chr10	135484	254626	135484	254626	+	ENST00000381607.8@ZMYND11	ENST00000381607.8	protein_coding	135484,179994,209889,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135559,180128,210048,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254626	Gene ID= ENSG00000015171.19 TPM= 22.46 Transcript Type= protein_coding
chr10	135069	254637	135069	254637	+	ENST00000381591.5@ZMYND11	ENST00000381591.5	protein_coding	135069,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135302,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254637	Gene ID= ENSG00000015171.19 TPM= 6.64 Transcript Type= protein_coding
chr10	806914	931705	806914	931705	-	ENST00000612396.4@LARP4B	ENST00000612396.4	protein_coding	931428,885641,884447,864123,863743,844977,842932,836403,830867,829681,829385,825764,825065,820800,817725,814946,814742,806914	931705,885760,884506,864270,863883,845055,843068,836506,830977,829734,829594,825870,825316,820845,817889,815070,814850,813213	Gene ID= ENSG00000107929.14 TPM= 49.23 Transcript Type= protein_coding
chr10	988019	1019936	988019	1019936	+	ENST00000360803.8@GTPBP4	ENST00000360803.8	protein_coding	988019,992489,995929,996106,997208,999003,1000677,1000948,1005818,1007018,1008958,1009529,1010420,1012465,1014247,1015753,1017075	988527,992659,996032,996242,997308,999095,1000868,1001013,1005907,1007128,1009035,1009580,1010520,1012662,1014312,1015896,1019936	Gene ID= ENSG00000107937.18 TPM= 8.69 Transcript Type= protein_coding
chr10	1018915	1025881	1018915	1025881	-	transcript75.chr10.nnic@IDI2	transcript75.chr10.nnic	protein_coding	1025816,1024582,1022683,1018915	1025881,1024744,1022775,1019834	Gene ID= ENSG00000148377.5 TPM= 8.69 Transcript Type= NA
chr10	1018906	1026736	1018906	1026736	-	transcript83.chr10.nnic@IDI2	transcript83.chr10.nnic	protein_coding	1025816,1018906	1026736,1019834	Gene ID= ENSG00000148377.5 TPM= 4.83 Transcript Type= NA
chr10	1018907	1025859	1018907	1025859	-	ENST00000277517.1@IDI2	ENST00000277517.1	protein_coding	1025816,1024582,1022683,1020767,1018907	1025859,1024744,1022775,1020897,1019834	Gene ID= ENSG00000148377.5 TPM= 265.46 Transcript Type= protein_coding
chr10	1040028	1056705	1040028	1056705	-	transcript101.chr10.nnic@IDI1	transcript101.chr10.nnic	protein_coding	1056309,1043999,1043301,1042632,1040028	1056705,1044171,1043393,1042762,1041504	Gene ID= ENSG00000067064.10 TPM= 8.69 Transcript Type= NA
chr10	1040028	1056745	1040028	1056745	-	transcript102.chr10.nnic@IDI1	transcript102.chr10.nnic	protein_coding	1056309,1054168,1043301,1042632,1040028	1056745,1054245,1043393,1042762,1041504	Gene ID= ENSG00000067064.10 TPM= 19.31 Transcript Type= NA
chr10	1040028	1056737	1040028	1056737	-	transcript106.chr10.nnic@IDI1	transcript106.chr10.nnic	protein_coding	1056309,1043301,1042632,1040028	1056737,1043393,1042762,1041504	Gene ID= ENSG00000067064.10 TPM= 9.65 Transcript Type= NA
chr10	1049080	1050264	1049080	1050264	+	transcript116.chr10.nnic@NA	transcript116.chr10.nnic	NA	1049080	1050264	Gene ID= novel_gene_chr10_117 TPM= 3.86 Transcript Type= NA
chr10	1056327	1132170	1056327	1132170	+	transcript84.chr10.nnic@WDR37	transcript84.chr10.nnic	protein_coding	1056327,1072116,1077907,1080011,1080412,1084403,1086286,1093452,1096170,1103599,1105126,1124218,1124910,1129213	1056564,1072293,1078003,1080106,1080476,1084538,1086357,1093496,1096246,1103836,1105267,1124352,1125024,1132170	Gene ID= ENSG00000047056.14 TPM= 9.65 Transcript Type= NA
chr10	1056802	1132170	1056802	1132170	+	transcript87.chr10.nnic@WDR37	transcript87.chr10.nnic	protein_coding	1056802,1072116,1077907,1080011,1080412,1084403,1086286,1093452,1096170,1103599,1105126,1124218,1124910,1129213	1056968,1072293,1078003,1080106,1080476,1084538,1086357,1093496,1096246,1103836,1105267,1124352,1125024,1132170	Gene ID= ENSG00000047056.14 TPM= 3.86 Transcript Type= NA
chr10	1056858	1132170	1056858	1132170	+	ENST00000263150.8@WDR37	ENST00000263150.8	protein_coding	1056858,1072116,1077907,1080011,1080412,1084403,1086286,1093452,1096170,1103602,1105126,1124218,1124910,1129213	1056968,1072293,1078003,1080106,1080476,1084538,1086357,1093496,1096246,1103836,1105267,1124352,1125024,1132170	Gene ID= ENSG00000047056.14 TPM= 22.68 Transcript Type= protein_coding
chr10	1055229	1056704	1055229	1056704	-	transcript118.chr10.nnic@NA	transcript118.chr10.nnic	NA	1055229	1056704	Gene ID= novel_gene_chr10_119 TPM= 1.93 Transcript Type= NA
chr10	3104648	3136793	3104648	3136793	+	transcript122.chr10.nic@PFKP	transcript122.chr10.nic	protein_coding	3104648,3105393,3107214,3108701,3109355,3112222,3113119,3113372,3116776,3118782,3119892,3129819,3132380,3133203,3134483,3135736,3136450	3105159,3105501,3107309,3108793,3109480,3112286,3113188,3113518,3116846,3118869,3120044,3129983,3132441,3133314,3134582,3135838,3136793	Gene ID= ENSG00000067057.16 TPM= 176.97 Transcript Type= NA
chr10	3067520	3136802	3067520	3136802	+	ENST00000381125.8@PFKP	ENST00000381125.8	protein_coding	3067520,3082388,3099275,3101365,3103779,3105115,3105393,3107214,3108701,3109355,3112222,3113119,3113372,3116776,3118782,3119892,3129819,3132380,3133203,3134483,3135736,3136450	3067707,3082461,3099352,3101554,3103944,3105159,3105501,3107309,3108793,3109480,3112286,3113188,3113518,3116846,3118869,3120044,3129983,3132441,3133314,3134582,3135838,3136802	Gene ID= ENSG00000067057.16 TPM= 23.49 Transcript Type= protein_coding
chr10	3137728	3172786	3137728	3172786	-	transcript130.chr10.nnic@PITRM1	transcript130.chr10.nnic	protein_coding	3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3148171,3147987,3147572,3147150,3145596,3144292,3143389,3140687,3138904,3138235,3137728	3172786,3170206,3167042,3166380,3165527,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3148291,3148063,3147737,3147250,3145716,3144366,3143501,3140765,3139049,3138337,3138124	Gene ID= ENSG00000107959.15 TPM= 13.35 Transcript Type= NA
chr10	3137730	3172807	3137730	3172807	-	ENST00000224949.8@PITRM1	ENST00000224949.8	protein_coding	3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3148171,3147987,3147572,3147150,3145596,3144292,3143389,3140687,3138904,3138235,3137730	3172807,3170206,3167042,3166380,3165527,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3148291,3148063,3147737,3147250,3145716,3144366,3143501,3140812,3139049,3138337,3138124	Gene ID= ENSG00000107959.15 TPM= 134.01 Transcript Type= protein_coding
chr10	3779047	3785224	3779047	3785224	-	transcript148.chr10.nic@KLF6	transcript148.chr10.nic	protein_coding	3784913,3783216,3781641,3780106,3779047	3785224,3783281,3782214,3780229,3779590	Gene ID= ENSG00000067082.14 TPM= 23.65 Transcript Type= NA
chr10	3779047	3785255	3779047	3785255	-	transcript165.chr10.nic@KLF6	transcript165.chr10.nic	protein_coding	3784913,3780106,3779047	3785255,3782214,3779590	Gene ID= ENSG00000067082.14 TPM= 19.31 Transcript Type= NA
chr10	3776552	3779559	3776552	3779559	-	transcript173.chr10.nnic@NA	transcript173.chr10.nnic	NA	3776552	3779559	Gene ID= novel_gene_chr10_174 TPM= 44.4 Transcript Type= NA
chr10	3780695	3784609	3780695	3784609	+	transcript167.chr10.nnic@NA	transcript167.chr10.nnic	NA	3780695	3784609	Gene ID= novel_gene_chr10_168 TPM= 10.62 Transcript Type= NA
chr10	4963253	4983283	4963253	4983283	+	ENST00000380872.8@AKR1C1	ENST00000380872.8	protein_coding	4963253,4965914,4966927,4968309,4968822,4972201,4972584,4975851,4977700	4963528,4966081,4967043,4968386,4968944,4972310,4972749,4975933,4983283	Gene ID= ENSG00000187134.13 TPM= 83.98 Transcript Type= protein_coding
chr10	4987400	5004023	4987400	5004023	-	ENST00000380753.8@AKR1C2	ENST00000380753.8	protein_coding	5003752,5001514,5000550,4999200,4998625,4995756,4995319,4991831,4987400	5004023,5001681,5000666,4999277,4998747,4995865,4995484,4991913,4990038	Gene ID= ENSG00000151632.17 TPM= 14.48 Transcript Type= protein_coding
chr10	5093793	5107686	5093793	5107686	+	ENST00000380554.4@AKR1C3	ENST00000380554.4	protein_coding	5093793,5096410,5097434,5098802,5099327,5102101,5102485,5105595,5107461	5094528,5096577,5097550,5098879,5099449,5102210,5102650,5105677,5107686	Gene ID= ENSG00000196139.13 TPM= 40.54 Transcript Type= protein_coding
chr10	5412551	5458463	5412551	5458463	+	ENST00000355029.8@NET1	ENST00000355029.8	protein_coding	5412551,5426655,5429170,5451830,5452358,5452858,5453250,5453484,5454265,5454948,5456087,5456588	5412820,5426721,5429229,5451937,5452525,5452920,5453346,5453560,5454522,5455118,5456273,5458463	Gene ID= ENSG00000173848.18 TPM= 46.33 Transcript Type= protein_coding
chr10	5446611	5458463	5446611	5458463	+	ENST00000380359.3@NET1	ENST00000380359.3	protein_coding	5446611,5451830,5452358,5452858,5453250,5453484,5454265,5454948,5456087,5456588	5446858,5451937,5452525,5452920,5453346,5453560,5454522,5455118,5456273,5458463	Gene ID= ENSG00000173848.18 TPM= 16.41 Transcript Type= protein_coding
chr10	5638868	5666578	5638868	5666578	-	ENST00000357700.10@ASB13	ENST00000357700.10	protein_coding	5666509,5652863,5651213,5648970,5641770,5638868	5666578,5653050,5651363,5649104,5641961,5640830	Gene ID= ENSG00000196372.12 TPM= 28.96 Transcript Type= protein_coding
chr10	5638868	5666578	5638868	5666578	-	ENST00000459912.5@ASB13	ENST00000459912.5	protein_coding	5666509,5652863,5651213,5648970,5642473,5641770,5638868	5666578,5653050,5651363,5649104,5642553,5641961,5640830	Gene ID= ENSG00000196372.12 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr10	5684838	5687414	5684838	5687414	+	transcript221.chr10.nnic@NA	transcript221.chr10.nnic	NA	5684838	5687414	Gene ID= novel_gene_chr10_222 TPM= 3.86 Transcript Type= NA
chr10	5765223	5813549	5765223	5813549	-	ENST00000380191.8@GDI2	ENST00000380191.8	protein_coding	5813214,5800598,5796763,5794885,5785852,5785142,5773842,5768213,5766494,5766241,5765223	5813549,5800705,5796862,5795019,5786050,5785273,5773941,5768384,5766638,5766295,5766152	Gene ID= ENSG00000057608.16 TPM= 184.21 Transcript Type= protein_coding
chr10	5765223	5813478	5765223	5813478	-	transcript215.chr10.nic@GDI2	transcript215.chr10.nic	protein_coding	5813214,5800598,5796763,5794885,5785852,5785142,5773842,5768213,5766241,5765223	5813478,5800705,5796862,5795019,5786050,5785273,5773941,5768384,5766295,5766152	Gene ID= ENSG00000057608.16 TPM= 9.97 Transcript Type= NA
chr10	5813005	5814642	5813005	5814642	+	transcript223.chr10.nnic@NA	transcript223.chr10.nnic	NA	5813005	5814642	Gene ID= novel_gene_chr10_224 TPM= 1.93 Transcript Type= NA
chr10	5878087	5889871	5878087	5889871	-	ENST00000380092.8@ANKRD16	ENST00000380092.8	protein_coding	5889041,5887847,5885723,5883969,5883006,5880298,5878087	5889871,5888067,5885765,5884077,5883167,5880376,5878287	Gene ID= ENSG00000134461.15 TPM= 11.58 Transcript Type= protein_coding
chr10	5890226	5937593	5890226	5937593	+	transcript242.chr10.nic@FBXO18	transcript242.chr10.nic	protein_coding	5890226,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110	5890346,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937593	Gene ID= ENSG00000134452.19 TPM= 35.48 Transcript Type= NA
chr10	5890222	5937534	5890222	5937534	+	transcript246.chr10.nnic@FBXO18	transcript246.chr10.nnic	protein_coding	5890222,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110	5890346,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937534	Gene ID= ENSG00000134452.19 TPM= 2.9 Transcript Type= NA
chr10	5890231	5937593	5890231	5937593	+	ENST00000362091.8@FBXO18	ENST00000362091.8	protein_coding	5890231,5903020,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110	5890346,5903175,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937593	Gene ID= ENSG00000134452.19 TPM= 24.86 Transcript Type= protein_coding
chr10	5952372	5978187	5952372	5978187	-	ENST00000525219.6@IL15RA	ENST00000525219.6	protein_coding	5977777,5966145,5963743,5960367,5959754,5956379,5952372	5978187,5966339,5963841,5960567,5959786,5956454,5953206	Gene ID= ENSG00000134470.20 TPM= 1.93 Transcript Type= protein_coding
chr10	5952371	5977590	5952371	5977590	-	ENST00000379977.7@IL15RA	ENST00000379977.7	protein_coding	5977405,5966145,5963743,5960367,5959754,5956379,5952371	5977590,5966339,5963841,5960567,5959786,5956454,5953206	Gene ID= ENSG00000134470.20 TPM= 2.9 Transcript Type= protein_coding
chr10	5949451	5951171	5949451	5951171	+	transcript262.chr10.nnic@NA	transcript262.chr10.nnic	NA	5949451	5951171	Gene ID= novel_gene_chr10_263 TPM= 11.58 Transcript Type= NA
chr10	5976960	5979729	5976960	5979729	+	transcript264.chr10.nnic@NA	transcript264.chr10.nnic	NA	5976960	5979729	Gene ID= novel_gene_chr10_265 TPM= 6.76 Transcript Type= NA
chr10	6089062	6115766	6089062	6115766	+	transcript278.chr10.nnic@RBM17	transcript278.chr10.nnic	protein_coding	6089062,6090641,6097048,6101271,6104931,6106141,6108686,6109986,6112210,6113508,6114049,6115239,6115453	6089193,6090742,6097188,6101387,6105097,6106238,6108742,6110127,6112361,6113581,6114147,6115311,6115766	Gene ID= ENSG00000134453.15 TPM= 25.58 Transcript Type= NA
chr10	6088987	6116880	6088987	6116880	+	ENST00000379888.8@RBM17	ENST00000379888.8	protein_coding	6088987,6097048,6101271,6104931,6106141,6108686,6109986,6112210,6113508,6114049,6115239,6115453	6089193,6097188,6101387,6105097,6106238,6108742,6110127,6112361,6113581,6114147,6115311,6116880	Gene ID= ENSG00000134453.15 TPM= 120.18 Transcript Type= protein_coding
chr10	6144899	6235532	6144899	6235532	+	transcript272.chr10.nic@PFKFB3	transcript272.chr10.nic	protein_coding	6144899,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6226192,6228196,6232895	6145013,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6226365,6228218,6235532	Gene ID= ENSG00000170525.19 TPM= 84.3 Transcript Type= NA
chr10	6202931	6235532	6202931	6235532	+	ENST00000379775.8@PFKFB3	ENST00000379775.8	protein_coding	6202931,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6226192,6232895	6203336,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6226365,6235532	Gene ID= ENSG00000170525.19 TPM= 51.48 Transcript Type= protein_coding
chr10	6144934	6235532	6144934	6235532	+	ENST00000379789.8@PFKFB3	ENST00000379789.8	protein_coding	6144934,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6226192,6232895	6145013,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6226365,6235532	Gene ID= ENSG00000170525.19 TPM= 18.66 Transcript Type= protein_coding
chr10	6149707	6153177	6149707	6153177	+	transcript304.chr10.nnic@NA	transcript304.chr10.nnic	NA	6149707	6153177	Gene ID= novel_gene_chr10_305 TPM= 1.93 Transcript Type= NA
chr10	6230721	6231474	6230721	6231474	-	transcript306.chr10.nnic@NA	transcript306.chr10.nnic	NA	6230721	6231474	Gene ID= novel_gene_chr10_307 TPM= 5.79 Transcript Type= NA
chr10	6427143	6515562	6427143	6515562	-	transcript311.chr10.nnic@PRKCQ	transcript311.chr10.nnic	protein_coding	6515321,6515018,6510995,6507436,6498396,6497220,6497035,6491683,6486035,6485152,6483440,6478992,6464313,6462303,6456674,6441893,6430810,6427143	6515562,6515144,6511194,6507496,6498558,6497251,6497120,6491812,6486144,6485269,6483600,6479165,6464404,6462365,6456812,6442081,6430938,6428362	Gene ID= ENSG00000065675.14 TPM= 43.15 Transcript Type= NA
chr10	6427143	6580301	6427143	6580301	-	ENST00000263125.9@PRKCQ	ENST00000263125.9	protein_coding	6580211,6515018,6510995,6507436,6498396,6497220,6497035,6491683,6486035,6485152,6483440,6478992,6464313,6462303,6456674,6441893,6430810,6427143	6580301,6515144,6511194,6507496,6498558,6497251,6497120,6491812,6486144,6485269,6483600,6479165,6464404,6462365,6456812,6442081,6430938,6428362	Gene ID= ENSG00000065675.14 TPM= 22.59 Transcript Type= protein_coding
chr10	6580419	6584299	6580419	6584299	+	ENST00000445427.1@PRKCQ-AS1	ENST00000445427.1	processed_transcript	6580419,6583676	6580927,6584299	Gene ID= ENSG00000237943.6 TPM= 8.69 Transcript Type= lincRNA
chr10	7559270	7666971	7559270	7666971	-	ENST00000397146.6@ITIH5	ENST00000397146.6	protein_coding	7666803,7655631,7641927,7640754,7637228,7617113,7615982,7585901,7579755,7576453,7573142,7569668,7566030,7559270	7666971,7655675,7642090,7640855,7637478,7617282,7616098,7586069,7580064,7577012,7573195,7569784,7566407,7563384	Gene ID= ENSG00000123243.14 TPM= 1.93 Transcript Type= protein_coding
chr10	7769258	7788009	7769258	7788009	-	transcript351.chr10.nic@KIN	transcript351.chr10.nic	protein_coding	7787820,7783081,7780264,7780056,7778838,7775751,7774831,7769258	7788009,7783175,7780307,7780178,7779019,7775799,7774891,7769345	Gene ID= ENSG00000151657.11 TPM= 7.72 Transcript Type= NA
chr10	7788177	7807815	7788177	7807815	+	ENST00000335698.4@ATP5C1	ENST00000335698.4	protein_coding	7788177,7796121,7797047,7798990,7799772,7800027,7802270,7802758,7807659	7788263,7796155,7797178,7799194,7799915,7800091,7802425,7802854,7807815	Gene ID= ENSG00000165629.19 TPM= 315.17 Transcript Type= protein_coding
chr10	7788129	7807815	7788129	7807815	+	ENST00000356708.11@ATP5C1	ENST00000356708.11	protein_coding	7788129,7796121,7797047,7798990,7799772,7800027,7802270,7802758,7806974,7807659	7788263,7796155,7797178,7799194,7799915,7800091,7802425,7802854,7807010,7807815	Gene ID= ENSG00000165629.19 TPM= 6.27 Transcript Type= protein_coding
chr10	7818504	8016627	7818504	8016627	+	ENST00000344293.5@TAF3	ENST00000344293.5	protein_coding	7818504,7824318,7963920,7977241,8009078,8013731,8014637	7818875,7824560,7965742,7977323,8009330,8013837,8016627	Gene ID= ENSG00000165632.7 TPM= 2.9 Transcript Type= protein_coding
chr10	8054693	8075198	8054693	8075198	+	ENST00000379328.7@GATA3	ENST00000379328.7	protein_coding	8054693,8055287,8058305,8063993,8069473,8073739	8054891,8055896,8058841,8064138,8069598,8075198	Gene ID= ENSG00000107485.15 TPM= 1.93 Transcript Type= protein_coding
chr10	11017917	11331277	11017917	11331277	+	transcript373.chr10.nnic@CELF2	transcript373.chr10.nnic	protein_coding	11017917,11017976,11165486,11217425,11249153,11257738,11266598,11270666,11275057,11288418,11314139,11321207,11325836,11328926,11330456	11017924,11018163,11165682,11217507,11249201,11257872,11266677,11270824,11275120,11288552,11314258,11321386,11325979,11329097,11331277	Gene ID= ENSG00000048740.18 TPM= 4.83 Transcript Type= NA
chr10	11334507	11336514	11334507	11336514	+	transcript381.chr10.nnic@NA	transcript381.chr10.nnic	NA	11334507	11336514	Gene ID= novel_gene_chr10_382 TPM= 1.93 Transcript Type= NA
chr10	11741888	11742196	11741888	11742196	-	transcript384.chr10.nnic@NA	transcript384.chr10.nnic	NA	11741888	11742196	Gene ID= novel_gene_chr10_385 TPM= 6.76 Transcript Type= NA
chr10	11742348	11757897	11742348	11757897	+	transcript395.chr10.nic@ECHDC3	transcript395.chr10.nic	protein_coding	11742348,11747349,11749495,11755408	11742746,11747470,11749592,11757897	Gene ID= ENSG00000134463.14 TPM= 8.93 Transcript Type= NA
chr10	11742348	11764068	11742348	11764068	+	transcript396.chr10.nnic@ECHDC3	transcript396.chr10.nnic	protein_coding	11742348,11747349,11749495,11763224	11742746,11747470,11749592,11764068	Gene ID= ENSG00000134463.14 TPM= 15.69 Transcript Type= NA
chr10	11742366	11764070	11742366	11764070	+	ENST00000379215.8@ECHDC3	ENST00000379215.8	protein_coding	11742366,11747349,11749495,11755408,11763224	11742746,11747470,11749592,11755608,11764070	Gene ID= ENSG00000134463.14 TPM= 388.3 Transcript Type= protein_coding
chr10	11869644	11870875	11869644	11870875	+	ENST00000379200.1@PROSER2	ENST00000379200.1	protein_coding	11869644	11870875	Gene ID= ENSG00000148426.12 TPM= 1.93 Transcript Type= protein_coding
chr10	12035157	12042845	12035157	12042845	-	transcript403.chr10.nic@UPF2	transcript403.chr10.nic	protein_coding	12042755,12035157	12042845,12035441	Gene ID= ENSG00000151461.19 TPM= 14.48 Transcript Type= NA
chr10	12035059	12043170	12035059	12043170	-	ENST00000460569.1@UPF2	ENST00000460569.1	protein_coding	12042914,12035059	12043170,12035441	Gene ID= ENSG00000151461.19 TPM= 1.93 Transcript Type= processed_transcript
chr10	11920022	12042834	11920022	12042834	-	ENST00000357604.9@UPF2	ENST00000357604.9	protein_coding	12042755,12035059,12028745,12014024,12004530,12001676,11999906,11997672,11979057,11967341,11964009,11959171,11956320,11955232,11952066,11948369,11943064,11942665,11936545,11931641,11929865,11920022	12042834,12035441,12029524,12014184,12004727,12001825,12000009,11997757,11979165,11967454,11964125,11959356,11956523,11955507,11952249,11948508,11943168,11942763,11936712,11931782,11929985,11921307	Gene ID= ENSG00000151461.19 TPM= 15.44 Transcript Type= protein_coding
chr10	12068926	12121238	12068926	12121238	+	transcript408.chr10.nnic@DHTKD1	transcript408.chr10.nnic	protein_coding	12068926,12081472,12084540,12087535,12088986,12091994,12094073,12097684,12100178,12101042,12106246,12107909,12112900,12117673,12118749,12120182,12120787	12069187,12081627,12084751,12087729,12089255,12092126,12094271,12097996,12100262,12101181,12106396,12108015,12113064,12117755,12118918,12120267,12121238	Gene ID= ENSG00000181192.11 TPM= 4.34 Transcript Type= NA
chr10	12068926	12121238	12068926	12121238	+	transcript410.chr10.nnic@DHTKD1	transcript410.chr10.nnic	protein_coding	12068926,12081472,12084540,12087535,12088986,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12117673,12118749,12120182,12120787	12069187,12081627,12084751,12087729,12089255,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12117755,12118918,12120267,12121238	Gene ID= ENSG00000181192.11 TPM= 2.41 Transcript Type= NA
chr10	12129701	12169956	12129701	12169956	+	ENST00000304267.12@SEC61A2	ENST00000304267.12	protein_coding	12129701,12133241,12136105,12143117,12149595,12149852,12155778,12156907,12157908,12160930,12162213,12169258	12129794,12133308,12136170,12143195,12149726,12149961,12155931,12157067,12158105,12161121,12162289,12169956	Gene ID= ENSG00000065665.20 TPM= 1.93 Transcript Type= protein_coding
chr10	12195966	12250588	12195966	12250588	+	ENST00000281141.8@CDC123	ENST00000281141.8	protein_coding	12195966,12198705,12209967,12210290,12215740,12217361,12230948,12235048,12237144,12238457,12246149,12249581,12250311	12196319,12198776,12210024,12210322,12215835,12217467,12230996,12235123,12237266,12238485,12246277,12249718,12250588	Gene ID= ENSG00000151465.13 TPM= 46.82 Transcript Type= protein_coding
chr10	12196182	12250587	12196182	12250587	+	transcript420.chr10.nic@CDC123	transcript420.chr10.nic	protein_coding	12196182,12198705,12209967,12210290,12215740,12217361,12230948,12235048,12237144,12238457,12246149,12249581	12196319,12198776,12210024,12210322,12215835,12217467,12230996,12235123,12237266,12238485,12246277,12250587	Gene ID= ENSG00000151465.13 TPM= 4.34 Transcript Type= NA
chr10	12196181	12250588	12196181	12250588	+	transcript421.chr10.nic@CDC123	transcript421.chr10.nic	protein_coding	12196181,12198705,12209967,12210290,12215740,12230948,12235048,12237144,12238457,12246149,12249581,12250311	12196319,12198776,12210024,12210322,12217467,12230996,12235123,12237266,12238485,12246277,12249718,12250588	Gene ID= ENSG00000151465.13 TPM= 1.93 Transcript Type= NA
chr10	12896625	13001697	12896625	13001697	-	ENST00000378825.4@CCDC3	ENST00000378825.4	protein_coding	13001197,12998338,12896625	13001697,12998512,12898679	Gene ID= ENSG00000151468.10 TPM= 9.65 Transcript Type= protein_coding
chr10	13100169	13138308	13100169	13138308	+	ENST00000378757.6@OPTN	ENST00000378757.6	protein_coding	13100169,13109112,13110274,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745	13100302,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138308	Gene ID= ENSG00000123240.16 TPM= 94.12 Transcript Type= protein_coding
chr10	13100225	13138291	13100225	13138291	+	ENST00000378747.7@OPTN	ENST00000378747.7	protein_coding	13100225,13108138,13109112,13110274,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745	13100302,13108289,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138291	Gene ID= ENSG00000123240.16 TPM= 6.85 Transcript Type= protein_coding
chr10	13100173	13138291	13100173	13138291	+	ENST00000378748.7@OPTN	ENST00000378748.7	protein_coding	13100173,13108138,13108962,13109097,13110274,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745	13100302,13108289,13109015,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138291	Gene ID= ENSG00000123240.16 TPM= 2.99 Transcript Type= protein_coding
chr10	13100173	13138291	13100173	13138291	+	ENST00000378752.7@OPTN	ENST00000378752.7	protein_coding	13100173,13108138,13108962,13109112,13110274,13112453,13116267,13118906,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745	13100302,13108289,13109015,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138291	Gene ID= ENSG00000123240.16 TPM= 5.89 Transcript Type= protein_coding
chr10	13277800	13300064	13277800	13300064	-	transcript557.chr10.nnic@PHYH	transcript557.chr10.nnic	protein_coding	13299968,13298187,13295496,13294428,13283690,13280976,13277800	13300064,13298245,13295606,13294596,13283839,13281110,13278354	Gene ID= ENSG00000107537.13 TPM= 23.65 Transcript Type= NA
chr10	13277800	13300101	13277800	13300101	-	ENST00000263038.8@PHYH	ENST00000263038.8	protein_coding	13299968,13298187,13295496,13294428,13291831,13288360,13283690,13280976,13277800	13300101,13298245,13295606,13294596,13291912,13288541,13283839,13281110,13278354	Gene ID= ENSG00000107537.13 TPM= 344.13 Transcript Type= protein_coding
chr10	13317439	13347741	13317439	13347741	-	transcript567.chr10.nic@SEPHS1	transcript567.chr10.nic	protein_coding	13347277,13344758,13338705,13336243,13333817,13329698,13328351,13322835,13317439	13347741,13345028,13338808,13336350,13333971,13329788,13328450,13323047,13319356	Gene ID= ENSG00000086475.14 TPM= 14.19 Transcript Type= NA
chr10	13317424	13348297	13317424	13348297	-	ENST00000327347.9@SEPHS1	ENST00000327347.9	protein_coding	13348000,13344758,13338705,13336243,13333817,13329698,13328351,13322835,13317424	13348297,13345028,13338808,13336350,13333971,13329788,13328450,13323047,13319356	Gene ID= ENSG00000086475.14 TPM= 12.74 Transcript Type= protein_coding
chr10	13441088	13529067	13441088	13529067	-	transcript583.chr10.nnic@BEND7	transcript583.chr10.nnic	protein_coding	13528483,13526138,13499739,13496766,13492611,13480899,13452539,13447266,13441088	13529067,13526221,13500080,13496888,13492876,13481124,13452658,13447316,13441750	Gene ID= ENSG00000165626.16 TPM= 1.93 Transcript Type= NA
chr10	13480885	13529053	13480885	13529053	-	transcript596.chr10.nic@BEND7	transcript596.chr10.nic	protein_coding	13528473,13526138,13499739,13496766,13492611,13480885	13529053,13526221,13500080,13496888,13492876,13481124	Gene ID= ENSG00000165626.16 TPM= 5.31 Transcript Type= NA
chr10	13498066	13528977	13498066	13528977	-	transcript604.chr10.nic@BEND7	transcript604.chr10.nic	protein_coding	13528473,13526138,13498066	13528977,13526221,13500080	Gene ID= ENSG00000165626.16 TPM= 1.93 Transcript Type= NA
chr10	13586925	13630868	13586925	13630868	+	transcript610.chr10.nic@PRPF18	transcript610.chr10.nic	protein_coding	13586925,13597458,13597645,13600244,13605631,13610039,13611615,13613741,13614015,13616398,13630260	13587152,13597535,13597671,13600348,13605744,13610185,13611683,13613881,13614086,13616553,13630868	Gene ID= ENSG00000165630.13 TPM= 3.86 Transcript Type= NA
chr10	13586925	13630868	13586925	13630868	+	transcript612.chr10.nnic@PRPF18	transcript612.chr10.nnic	protein_coding	13586925,13597458,13597645,13600244,13605631,13610039,13611615,13614015,13616398,13630260	13587152,13597535,13597671,13600348,13605744,13610185,13611683,13614086,13616553,13630868	Gene ID= ENSG00000165630.13 TPM= 1.93 Transcript Type= NA
chr10	13586927	13630868	13586927	13630868	+	ENST00000378572.7@PRPF18	ENST00000378572.7	protein_coding	13586927,13597458,13600244,13605631,13610039,13611615,13613741,13614015,13616398,13630260	13587152,13597535,13600348,13605744,13610185,13611683,13613881,13614086,13616553,13630868	Gene ID= ENSG00000165630.13 TPM= 5.79 Transcript Type= protein_coding
chr10	14838164	14871741	14838164	14871741	+	ENST00000378372.7@HSPA14	ENST00000378372.7	protein_coding	14838164,14839905,14840075,14848609,14848790,14849721,14851219,14852370,14854125,14855841,14867083,14867736,14870597,14871528	14838459,14839985,14840157,14848657,14848895,14849811,14851323,14852531,14854280,14855943,14867295,14867909,14870667,14871741	Gene ID= ENSG00000187522.14 TPM= 60.33 Transcript Type= protein_coding
chr10	14838254	14871741	14838254	14871741	+	transcript634.chr10.nnic@HSPA14	transcript634.chr10.nnic	protein_coding	14838254,14839905,14840075,14848609,14848790,14849721,14852370,14854125,14855841,14867083,14867736,14870597,14871528	14838459,14839985,14840157,14848657,14848895,14849811,14852531,14854280,14855943,14867295,14867909,14870667,14871741	Gene ID= ENSG00000187522.14 TPM= 2.9 Transcript Type= NA
chr10	14838302	14844737	14838302	14844737	+	ENST00000437161.6@HSPA14	ENST00000437161.6	protein_coding	14838302,14839905,14840075,14843371	14838459,14839985,14840157,14844737	Gene ID= ENSG00000187522.14 TPM= 2.9 Transcript Type= protein_coding
chr10	14838166	14844727	14838166	14844727	+	ENST00000640019.1@AC069544.2	ENST00000640019.1	protein_coding	14838166,14839905,14840075,14842134,14843371	14838459,14839985,14840157,14842846,14844727	Gene ID= ENSG00000284024.1 TPM= 5.79 Transcript Type= protein_coding
chr10	14877688	14878686	14877688	14878686	-	ENST00000609399.1@AC069544.1	ENST00000609399.1	lincRNA	14877688	14878686	Gene ID= ENSG00000272853.1 TPM= 1.93 Transcript Type= lincRNA
chr10	14898203	14954094	14898203	14954094	-	transcript645.chr10.nnic@DCLRE1C	transcript645.chr10.nnic	protein_coding	14953902,14949036,14945105,14939810,14936538,14935463,14934703,14934380,14932854,14928016,14926843,14922981,14919738,14908705,14898203	14954094,14949087,14945189,14939869,14936593,14935564,14934775,14934520,14932955,14928152,14926897,14923069,14919832,14909330,14900248	Gene ID= ENSG00000152457.17 TPM= 1.93 Transcript Type= NA
chr10	14908166	14954094	14908166	14954094	-	transcript648.chr10.nnic@DCLRE1C	transcript648.chr10.nnic	protein_coding	14953902,14949036,14945105,14939810,14936538,14935463,14934703,14932854,14928016,14926843,14922981,14919738,14908166	14954094,14949087,14945189,14939869,14936593,14935564,14934775,14932955,14928152,14926897,14923069,14919832,14909330	Gene ID= ENSG00000152457.17 TPM= 1.93 Transcript Type= NA
chr10	14908171	14954048	14908171	14954048	-	ENST00000378278.6@DCLRE1C	ENST00000378278.6	protein_coding	14953902,14949036,14945105,14939810,14936538,14935463,14934703,14934380,14932854,14928016,14926843,14922981,14919738,14908171	14954048,14949087,14945189,14939869,14936593,14935564,14934775,14934520,14932955,14928152,14926897,14923069,14919832,14909330	Gene ID= ENSG00000152457.17 TPM= 1.93 Transcript Type= protein_coding
chr10	15097331	15104255	15097331	15104255	+	ENST00000378202.5@RPP38	ENST00000378202.5	protein_coding	15097331,15103305	15097409,15104255	Gene ID= ENSG00000152464.14 TPM= 13.03 Transcript Type= protein_coding
chr10	15097180	15104254	15097180	15104254	+	ENST00000616640.1@RPP38	ENST00000616640.1	protein_coding	15097180,15103305	15097766,15104254	Gene ID= ENSG00000152464.14 TPM= 1.45 Transcript Type= protein_coding
chr10	15097180	15104251	15097180	15104251	+	ENST00000378203.5@RPP38	ENST00000378203.5	protein_coding	15097180,15102218,15103305	15097409,15102336,15104251	Gene ID= ENSG00000152464.14 TPM= 13.03 Transcript Type= protein_coding
chr10	15097382	15104257	15097382	15104257	+	ENST00000378197.4@RPP38	ENST00000378197.4	protein_coding	15097382,15102218,15103305	15097766,15102336,15104257	Gene ID= ENSG00000152464.14 TPM= 10.14 Transcript Type= protein_coding
chr10	15107866	15168693	15107866	15168693	-	ENST00000378165.8@NMT2	ENST00000378165.8	protein_coding	15168503,15141422,15135274,15133245,15133053,15132817,15130142,15128350,15119343,15112796,15109702,15107866	15168693,15141557,15135418,15133363,15133144,15132933,15130312,15128458,15119513,15112963,15109839,15109215	Gene ID= ENSG00000152465.17 TPM= 2.9 Transcript Type= protein_coding
chr10	15211643	15371059	15211643	15371059	-	ENST00000378116.8@FAM171A1	ENST00000378116.8	protein_coding	15370956,15283878,15275855,15254721,15248639,15220944,15215996,15211643	15371059,15284105,15275947,15254879,15248815,15221060,15216110,15214601	Gene ID= ENSG00000148468.16 TPM= 6.76 Transcript Type= protein_coding
chr10	15778170	15860520	15778170	15860520	-	ENST00000277632.7@MINDY3	ENST00000277632.7	protein_coding	15860206,15847864,15843212,15841426,15838228,15837204,15834543,15833630,15821656,15816835,15796100,15789247,15786561,15782155,15778170	15860520,15847943,15843272,15841599,15838279,15837318,15834616,15833709,15821726,15816915,15796172,15789319,15786648,15782226,15779141	Gene ID= ENSG00000148481.13 TPM= 1.93 Transcript Type= protein_coding
chr10	15778170	15860507	15778170	15860507	-	transcript677.chr10.nnic@MINDY3	transcript677.chr10.nnic	protein_coding	15860206,15843212,15841426,15837204,15834543,15833630,15821656,15816835,15796100,15789247,15786561,15782155,15778170	15860507,15843272,15841599,15837318,15834616,15833709,15821726,15816915,15796172,15789319,15786648,15782226,15779141	Gene ID= ENSG00000148481.13 TPM= 1.93 Transcript Type= NA
chr10	15778170	15809527	15778170	15809527	-	transcript679.chr10.nnic@MINDY3	transcript679.chr10.nnic	protein_coding	15809416,15796100,15789247,15786561,15782155,15778170	15809527,15796172,15789319,15786648,15782226,15779141	Gene ID= ENSG00000148481.13 TPM= 4.83 Transcript Type= NA
chr10	15778170	15860498	15778170	15860498	-	ENST00000477891.1@MINDY3	ENST00000477891.1	protein_coding	15860206,15847864,15843212,15841426,15837204,15834543,15833630,15821656,15816835,15796100,15789247,15786561,15782155,15778170	15860498,15847943,15843272,15841599,15837318,15834616,15833709,15821726,15816915,15796172,15789319,15786648,15782226,15779141	Gene ID= ENSG00000148481.13 TPM= 1.93 Transcript Type= processed_transcript
chr10	16590611	16817528	16590611	16817528	-	ENST00000345264.9@RSU1	ENST00000345264.9	protein_coding	16817315,16816973,16782034,16764390,16754871,16752918,16752539,16695023,16590611	16817528,16817084,16782084,16764510,16754989,16753000,16752653,16695155,16593496	Gene ID= ENSG00000148484.17 TPM= 2.41 Transcript Type= protein_coding
chr10	16590620	16817454	16590620	16817454	-	ENST00000602389.1@RSU1	ENST00000602389.1	protein_coding	16817315,16782034,16764390,16754871,16752918,16752539,16695023,16590620	16817454,16782084,16764510,16754989,16753000,16752653,16695155,16593496	Gene ID= ENSG00000148484.17 TPM= 2.41 Transcript Type= protein_coding
chr10	17228259	17237592	17228259	17237592	+	ENST00000544301.6@VIM	ENST00000544301.6	protein_coding	17228259,17229276,17230650,17233587,17233770,17234693,17235169,17235846,17236294,17237230	17228524,17229985,17230710,17233682,17233931,17234818,17235389,17235889,17236379,17237592	Gene ID= ENSG00000026025.15 TPM= 251.3 Transcript Type= protein_coding
chr10	17229278	17237593	17229278	17237593	+	ENST00000224237.9@VIM	ENST00000224237.9	protein_coding	17229278,17230650,17233587,17233770,17234693,17235169,17235846,17236294,17237230	17229985,17230710,17233682,17233931,17234818,17235389,17235889,17236379,17237593	Gene ID= ENSG00000026025.15 TPM= 60.17 Transcript Type= protein_coding
chr10	17590275	17617350	17590275	17617350	-	transcript710.chr10.nnic@HACD1	transcript710.chr10.nnic	protein_coding	17617083,17603930,17603726,17603560,17599274,17594205,17590275	17617350,17604047,17603744,17603648,17599411,17594383,17590446	Gene ID= ENSG00000165996.13 TPM= 1.93 Transcript Type= NA
chr10	17589032	17617377	17589032	17617377	-	ENST00000361271.7@HACD1	ENST00000361271.7	protein_coding	17617083,17603930,17603726,17603560,17599290,17594205,17589032	17617377,17604047,17603744,17603648,17599411,17594383,17590446	Gene ID= ENSG00000165996.13 TPM= 3.86 Transcript Type= protein_coding
chr10	17615477	17617367	17615477	17617367	-	ENST00000326961.6@HACD1	ENST00000326961.6	protein_coding	17617083,17615477	17617367,17615964	Gene ID= ENSG00000165996.13 TPM= 13.51 Transcript Type= protein_coding
chr10	17644125	17715914	17644125	17715914	+	ENST00000377524.7@STAM	ENST00000377524.7	protein_coding	17644125,17660464,17684675,17684832,17688027,17693222,17695049,17696775,17700191,17704431,17704970,17705588,17708776,17714543	17644379,17660548,17684750,17684927,17688173,17693312,17695241,17696869,17700279,17704518,17705024,17705741,17708951,17715914	Gene ID= ENSG00000136738.14 TPM= 38.61 Transcript Type= protein_coding
chr10	17809344	17911170	17809344	17911170	+	ENST00000569591.2@MRC1	ENST00000569591.2	protein_coding	17809344,17823074,17827542,17833675,17840693,17845289,17849579,17852967,17856242,17861387,17863534,17866562,17870246,17870848,17871982,17873784,17875090,17877900,17879721,17880525,17881067,17885269,17894210,17898034,17900788,17901973,17906886,17907534,17909306,17910215	17809526,17823475,17827715,17833839,17840806,17845435,17849764,17853124,17856352,17861502,17863682,17866761,17870373,17870935,17872126,17873825,17875253,17877967,17879821,17880670,17881181,17885435,17894312,17898266,17900953,17902122,17906999,17907698,17909347,17911170	Gene ID= ENSG00000260314.2 TPM= 1.93 Transcript Type= protein_coding
chr10	18545561	18651622	18545561	18651622	-	ENST00000377304.6@NSUN6	ENST00000377304.6	protein_coding	18651129,18648490,18642476,18616184,18614460,18609845,18596208,18585949,18551823,18548112,18545561	18651622,18648645,18642555,18616293,18614613,18609926,18596327,18586093,18551971,18548237,18546145	Gene ID= ENSG00000241058.3 TPM= 1.93 Transcript Type= protein_coding
chr10	18659405	18681639	18659405	18681639	+	ENST00000377275.3@ARL5B	ENST00000377275.3	protein_coding	18659405,18666575,18668530,18672622,18673984,18675168	18659683,18666635,18668677,18672705,18674135,18681639	Gene ID= ENSG00000165997.4 TPM= 2.9 Transcript Type= protein_coding
chr10	19816239	20289856	19816239	20289856	+	ENST00000377252.4@PLXDC2	ENST00000377252.4	protein_coding	19816239,20001775,20046869,20068170,20143295,20147784,20164468,20176999,20177328,20211669,20217426,20219064,20245345,20279703	19817191,20001986,20047015,20068239,20143417,20147902,20164567,20177094,20177409,20211729,20217576,20219102,20245505,20289856	Gene ID= ENSG00000120594.16 TPM= 2.41 Transcript Type= protein_coding
chr10	19816384	20247327	19816384	20247327	+	transcript738.chr10.nnic@PLXDC2	transcript738.chr10.nnic	protein_coding	19816384,20001775,20046867,20068170,20143295,20147784,20164468,20176999,20177328,20211669,20217423,20219064,20245345	19817191,20001986,20047015,20068239,20143417,20147902,20164567,20177094,20177409,20211729,20217576,20219102,20247327	Gene ID= ENSG00000120594.16 TPM= 33.3 Transcript Type= NA
chr10	21756537	22003739	21756537	22003739	-	transcript744.chr10.nnic@DNAJC1	transcript744.chr10.nnic	protein_coding	22003213,21929040,21928506,21920798,21919832,21918779,21906423,21904522,21882282,21805980,21766261,21759170,21756537	22003739,21929141,21928552,21920963,21919929,21918872,21906516,21904612,21882439,21806099,21766309,21759618,21756755	Gene ID= ENSG00000136770.10 TPM= 1.93 Transcript Type= NA
chr10	21756537	22003725	21756537	22003725	-	ENST00000376980.7@DNAJC1	ENST00000376980.7	protein_coding	22003213,21929040,21928506,21920798,21919832,21918779,21904522,21882282,21805980,21766261,21759170,21756537	22003725,21929141,21928552,21920963,21919929,21918872,21904612,21882439,21806099,21766309,21759618,21756755	Gene ID= ENSG00000136770.10 TPM= 13.51 Transcript Type= protein_coding
chr10	22315974	22320308	22315974	22320308	+	ENST00000376836.7@COMMD3	ENST00000376836.7	protein_coding	22315974,22317884,22318105,22318272,22318653,22318806,22318959,22319939	22316556,22317995,22318168,22318306,22318713,22318862,22319018,22320308	Gene ID= ENSG00000148444.15 TPM= 39.26 Transcript Type= protein_coding
chr10	22316452	22320306	22316452	22320306	+	transcript752.chr10.nic@COMMD3	transcript752.chr10.nic	protein_coding	22316452,22317884,22318105,22318272,22318806,22318959,22319939	22316556,22317995,22318168,22318713,22318862,22319018,22320306	Gene ID= ENSG00000148444.15 TPM= 2.58 Transcript Type= NA
chr10	22316441	22320306	22316441	22320306	+	ENST00000463688.6@COMMD3	ENST00000463688.6	protein_coding	22316441,22317884,22318105,22318272,22319939	22316556,22317995,22318168,22319018,22320306	Gene ID= ENSG00000148444.15 TPM= 1.61 Transcript Type= retained_intron
chr10	22321899	22331066	22321899	22331066	+	transcript761.chr10.nic@BMI1	transcript761.chr10.nic	protein_coding	22321899,22326431,22326890,22327595,22327742,22327950,22328134,22328600,22329048,22329213	22322170,22326561,22326986,22327650,22327792,22328058,22328179,22328698,22329128,22331066	Gene ID= ENSG00000168283.13 TPM= 1.93 Transcript Type= NA
chr10	22321211	22331484	22321211	22331484	+	ENST00000376663.7@BMI1	ENST00000376663.7	protein_coding	22321211,22326431,22326890,22327595,22327742,22327950,22328134,22328600,22329048,22329213	22321696,22326561,22326986,22327650,22327792,22328058,22328179,22328698,22329128,22331484	Gene ID= ENSG00000168283.13 TPM= 14.48 Transcript Type= protein_coding
chr10	23095506	23122013	23095506	23122013	+	ENST00000376510.7@MSRB2	ENST00000376510.7	protein_coding	23095506,23104144,23110242,23119304,23120758	23095726,23104244,23110318,23119451,23122013	Gene ID= ENSG00000148450.12 TPM= 47.3 Transcript Type= protein_coding
chr10	23095588	23120954	23095588	23120954	+	transcript770.chr10.nnic@MSRB2	transcript770.chr10.nnic	protein_coding	23095588,23110242,23119304,23120758	23095726,23110318,23119451,23120954	Gene ID= ENSG00000148450.12 TPM= 1.93 Transcript Type= NA
chr10	23439458	23442390	23439458	23442390	+	ENST00000376495.4@OTUD1	ENST00000376495.4	protein_coding	23439458	23442390	Gene ID= ENSG00000165312.6 TPM= 38.61 Transcript Type= protein_coding
chr10	24449404	24533964	24449404	24533964	+	transcript789.chr10.nic@KIAA1217	transcript789.chr10.nic	protein_coding	24449404,24473228,24495147,24501379,24513259,24520123,24521782,24524323,24527936,24531830,24533070	24449764,24474060,24495196,24501545,24513434,24520253,24521929,24524764,24528119,24531993,24533964	Gene ID= ENSG00000120549.17 TPM= 3.38 Transcript Type= NA
chr10	24449416	24452530	24449416	24452530	+	transcript799.chr10.nnic@NA	transcript799.chr10.nnic	NA	24449416	24452530	Gene ID= novel_gene_chr10_800 TPM= 3.86 Transcript Type= NA
chr10	24538734	24544404	24538734	24544404	-	transcript805.chr10.nnic@NA	transcript805.chr10.nnic	NA	24538734	24544404	Gene ID= novel_gene_chr10_806 TPM= 7.72 Transcript Type= NA
chr10	24545047	24547673	24545047	24547673	+	transcript801.chr10.nnic@NA	transcript801.chr10.nnic	NA	24545047	24547673	Gene ID= novel_gene_chr10_802 TPM= 5.79 Transcript Type= NA
chr10	26697659	26746798	26697659	26746798	+	ENST00000376215.9@PDSS1	ENST00000376215.9	protein_coding	26697659,26702162,26704677,26705286,26709638,26720218,26723806,26724014,26735240,26735466,26742497,26746333	26697840,26702194,26704741,26705394,26709768,26720359,26723917,26724123,26735320,26735579,26742577,26746798	Gene ID= ENSG00000148459.15 TPM= 7.72 Transcript Type= protein_coding
chr10	26931206	26939772	26931206	26939772	-	transcript828.chr10.nnic@FAM238C	transcript828.chr10.nnic	transcribed_unprocessed_pseudogene	26939296,26934413,26931206	26939772,26934516,26931562	Gene ID= ENSG00000283709.1 TPM= 11.58 Transcript Type= NA
chr10	27035636	27100534	27035636	27100534	-	transcript830.chr10.nic@ANKRD26	transcript830.chr10.nic	protein_coding	27100085,27093685,27093349,27092406,27086539,27082803,27079089,27077633,27077338,27067157,27066487,27063988,27061144,27060512,27060345,27053320,27048801,27046353,27044157,27043426,27039965,27037871,27037186,27035636	27100534,27093799,27093522,27092512,27086609,27082833,27079161,27077693,27077540,27067286,27066548,27064081,27061242,27060540,27060417,27053390,27048979,27046523,27044190,27043567,27040178,27038054,27037323,27035752	Gene ID= ENSG00000107890.16 TPM= 3.86 Transcript Type= NA
chr10	27064025	27100482	27064025	27100482	-	transcript838.chr10.nnic@ANKRD26	transcript838.chr10.nnic	protein_coding	27100085,27098180,27093685,27093349,27092406,27086539,27082803,27079089,27077633,27077338,27067157,27066487,27064025	27100482,27098326,27093799,27093522,27092512,27086609,27082833,27079161,27077693,27077540,27067286,27066548,27064081	Gene ID= ENSG00000107890.16 TPM= 1.93 Transcript Type= NA
chr10	27110454	27154392	27110454	27154392	-	ENST00000376016.7@YME1L1	ENST00000376016.7	protein_coding	27154178,27148906,27145428,27142387,27136276,27134831,27134039,27131859,27126696,27123547,27122841,27121386,27120435,27119294,27117576,27116219,27116060,27114521,27110454	27154392,27149040,27145590,27142485,27136385,27134981,27134122,27131941,27126786,27123699,27122973,27121448,27120547,27119449,27117727,27116345,27116133,27114607,27112120	Gene ID= ENSG00000136758.18 TPM= 79.16 Transcript Type= protein_coding
chr10	27195217	27242129	27195217	27242129	-	transcript876.chr10.nic@ACBD5	transcript876.chr10.nic	protein_coding	27242059,27240319,27235092,27231748,27223338,27223207,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217	27242129,27240484,27235212,27231820,27223452,27223239,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 10.06 Transcript Type= NA
chr10	27195214	27240815	27195214	27240815	-	ENST00000396271.7@ACBD5	ENST00000396271.7	protein_coding	27240674,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195214	27240815,27240484,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 12.31 Transcript Type= protein_coding
chr10	27195217	27242130	27195217	27242130	-	ENST00000375905.8@ACBD5	ENST00000375905.8	protein_coding	27242059,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217	27242130,27240484,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 36.12 Transcript Type= protein_coding
chr10	27195217	27242088	27195217	27242088	-	ENST00000375901.5@ACBD5	ENST00000375901.5	protein_coding	27242059,27240319,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217	27242088,27240484,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 6.2 Transcript Type= protein_coding
chr10	28050993	28303064	28050993	28303064	-	transcript917.chr10.nnic@MPP7	transcript917.chr10.nnic	protein_coding	28302861,28238568,28202153,28149982,28147483,28131560,28125010,28124031,28120594,28120194,28119651,28089671,28069772,28059650,28058495,28056480,28050993	28303064,28238735,28202271,28150059,28147563,28131691,28125091,28124116,28120668,28120390,28119715,28089841,28069852,28059743,28058603,28056623,28054244	Gene ID= ENSG00000150054.18 TPM= 3.54 Transcript Type= NA
chr10	28117901	28303064	28117901	28303064	-	transcript925.chr10.nnic@MPP7	transcript925.chr10.nnic	protein_coding	28302861,28238568,28202153,28149982,28147483,28131560,28125010,28124031,28120594,28120194,28119651,28117901	28303064,28238735,28202271,28150059,28147563,28131691,28125091,28124116,28120668,28120390,28119715,28119061	Gene ID= ENSG00000150054.18 TPM= 5.79 Transcript Type= NA
chr10	28523995	28532743	28523995	28532743	-	transcript951.chr10.nic@WAC-AS1	transcript951.chr10.nic	antisense_RNA	28532442,28523995	28532743,28526008	Gene ID= ENSG00000254635.5 TPM= 5.79 Transcript Type= NA
chr10	28532493	28623112	28532493	28623112	+	ENST00000375664.8@WAC	ENST00000375664.8	protein_coding	28532493,28533998,28535562,28583399,28589736,28590720,28595733,28608186,28610699,28611774,28614567,28616173,28617657,28619537	28533007,28534034,28535757,28583505,28589851,28590832,28596041,28608431,28610821,28611922,28614685,28616362,28617784,28623112	Gene ID= ENSG00000095787.21 TPM= 5.79 Transcript Type= protein_coding
chr10	28532770	28619979	28532770	28619979	+	transcript937.chr10.nic@WAC	transcript937.chr10.nic	protein_coding	28532770,28533998,28535562,28583399,28589736,28590720,28608186,28610699,28611774,28614567,28616173,28617657,28619537	28533007,28534034,28535757,28583505,28589851,28590832,28608431,28610821,28611922,28614685,28616362,28617784,28619979	Gene ID= ENSG00000095787.21 TPM= 4.83 Transcript Type= NA
chr10	28532784	28619976	28532784	28619976	+	ENST00000375646.5@WAC	ENST00000375646.5	protein_coding	28532784,28533998,28535562,28583399,28589736,28590720,28608186,28610711,28611774,28614567,28616173,28617657,28619537	28533007,28534034,28535757,28583505,28589851,28590832,28608431,28610821,28611922,28614685,28616362,28617784,28619976	Gene ID= ENSG00000095787.21 TPM= 6.76 Transcript Type= protein_coding
chr10	28677342	28682939	28677342	28682939	+	ENST00000375533.5@BAMBI	ENST00000375533.5	protein_coding	28677342,28681258,28681983	28677973,28681545,28682939	Gene ID= ENSG00000095739.10 TPM= 4.83 Transcript Type= protein_coding
chr10	29409534	29427648	29409534	29427648	+	transcript983.chr10.nnic@SVIL-AS1	transcript983.chr10.nnic	antisense_RNA	29409534,29415357,29420491,29423798	29409683,29415412,29423222,29427648	Gene ID= ENSG00000224597.9 TPM= 5.79 Transcript Type= NA
chr10	29409572	29422372	29409572	29422372	+	ENST00000427063.6@SVIL-AS1	ENST00000427063.6	antisense_RNA	29409572,29415357,29420491	29409658,29415412,29422372	Gene ID= ENSG00000224597.9 TPM= 10.62 Transcript Type= antisense_RNA
chr10	29510302	29634975	29510302	29634975	-	transcript964.chr10.nnic@SVIL	transcript964.chr10.nnic	protein_coding	29634420,29569255,29563201,29555051,29554783,29550597,29535989,29532529,29532002,29531254,29530607,29529705,29526961,29524472,29523451,29522410,29512735,29510302	29634975,29569312,29563292,29555108,29554934,29551263,29536069,29533458,29532172,29531288,29530668,29529844,29527056,29524715,29524027,29522635,29512861,29511767	Gene ID= ENSG00000197321.14 TPM= 130.18 Transcript Type= NA
chr10	29533065	29735928	29533065	29735928	-	transcript966.chr10.nic@SVIL	transcript966.chr10.nic	protein_coding	29735751,29686553,29657969,29569255,29563201,29555051,29554783,29550597,29535989,29533065	29735928,29686651,29658068,29569312,29563292,29555108,29554934,29551263,29536069,29533458	Gene ID= ENSG00000197321.14 TPM= 18.18 Transcript Type= NA
chr10	29533065	29737041	29533065	29737041	-	transcript967.chr10.nic@SVIL	transcript967.chr10.nic	protein_coding	29736685,29686553,29657969,29569255,29563201,29555051,29554783,29550597,29535989,29533065	29737041,29686651,29658068,29569312,29563292,29555108,29554934,29551263,29536069,29533458	Gene ID= ENSG00000197321.14 TPM= 15.28 Transcript Type= NA
chr10	29457338	29735804	29457338	29735804	-	ENST00000375400.7@SVIL	ENST00000375400.7	protein_coding	29735751,29686553,29657969,29569255,29563201,29555051,29554783,29550597,29531254,29530607,29529705,29524472,29523451,29522410,29512735,29499116,29495092,29494914,29493214,29490847,29488601,29487163,29486410,29486085,29484656,29481584,29480537,29473838,29471138,29470276,29467742,29465595,29463492,29462277,29458434,29457338	29735804,29686651,29658068,29569312,29563292,29555108,29554934,29551263,29531288,29530668,29529844,29524715,29524027,29522635,29512861,29499263,29495181,29495000,29493391,29491019,29488756,29487299,29486557,29486230,29484831,29481728,29480813,29473989,29471243,29470483,29467875,29465750,29463635,29462401,29458589,29458333	Gene ID= ENSG00000197321.14 TPM= 207.26 Transcript Type= protein_coding
chr10	29508031	29522568	29508031	29522568	-	ENST00000464984.1@SVIL	ENST00000464984.1	protein_coding	29522410,29512735,29508031	29522568,29512861,29508389	Gene ID= ENSG00000197321.14 TPM= 2.9 Transcript Type= processed_transcript
chr10	29549883	29552580	29549883	29552580	+	transcript1000.chr10.nnic@NA	transcript1000.chr10.nnic	NA	29549883	29552580	Gene ID= novel_gene_chr10_1001 TPM= 6.92 Transcript Type= NA
chr10	29631371	29633256	29631371	29633256	+	transcript998.chr10.nnic@NA	transcript998.chr10.nnic	NA	29631371	29633256	Gene ID= novel_gene_chr10_999 TPM= 24.13 Transcript Type= NA
chr10	30012800	30059524	30012800	30059524	-	ENST00000375377.1@JCAD	ENST00000375377.1	protein_coding	30059482,30047532,30026103,30012800	30059524,30047871,30029866,30017917	Gene ID= ENSG00000165757.8 TPM= 7.72 Transcript Type= protein_coding
chr10	30309801	30349319	30309801	30349319	-	ENST00000263063.8@MTPAP	ENST00000263063.8	protein_coding	30349119,30341468,30340226,30336803,30326424,30322391,30316118,30315963,30309801	30349319,30341640,30340450,30337027,30326635,30322617,30316210,30316036,30313971	Gene ID= ENSG00000107951.14 TPM= 118.73 Transcript Type= protein_coding
chr10	30434011	30439463	30434011	30439463	+	transcript1016.chr10.nic@MAP3K8	transcript1016.chr10.nic	protein_coding	30434011,30438916	30434378,30439463	Gene ID= ENSG00000107968.9 TPM= 2.9 Transcript Type= NA
chr10	30433979	30436649	30433979	30436649	+	transcript1017.chr10.nnic@NA	transcript1017.chr10.nnic	NA	30433979	30436649	Gene ID= novel_gene_chr10_1018 TPM= 1.93 Transcript Type= NA
chr10	30844638	31031937	30844638	31031937	-	ENST00000436087.6@ZNF438	ENST00000436087.6	protein_coding	31031833,30984369,30941575,30908933,30876998,30848531,30844638	31031937,30984426,30941651,30909015,30877065,30850367,30845573	Gene ID= ENSG00000183621.15 TPM= 4.83 Transcript Type= protein_coding
chr10	30840905	30841985	30840905	30841985	+	transcript1040.chr10.nnic@NA	transcript1040.chr10.nnic	NA	30840905,30841303,30841656	30841001,30841421,30841985	Gene ID= novel_gene_chr10_1041 TPM= 2.9 Transcript Type= NA
chr10	30928004	30930778	30928004	30930778	-	transcript1042.chr10.nnic@NA	transcript1042.chr10.nnic	NA	30928004	30930778	Gene ID= novel_gene_chr10_1043 TPM= 2.9 Transcript Type= NA
chr10	31316528	31319030	31316528	31319030	-	ENST00000607166.1@ZEB1-AS1	ENST00000607166.1	antisense_RNA	31316528	31319030	Gene ID= ENSG00000237036.4 TPM= 3.86 Transcript Type= antisense_RNA
chr10	31319208	31527390	31319208	31527390	+	transcript1048.chr10.nic@ZEB1	transcript1048.chr10.nic	protein_coding	31319208,31373018,31387124,31461037,31495779,31502348,31510673,31514603,31520126,31523933,31526672	31319292,31373173,31387266,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31527390	Gene ID= ENSG00000148516.21 TPM= 1.93 Transcript Type= NA
chr10	31319172	31529813	31319172	31529813	+	ENST00000361642.9@ZEB1	ENST00000361642.9	protein_coding	31319172,31461037,31495776,31502348,31510673,31514603,31520126,31523933,31526672	31319292,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529813	Gene ID= ENSG00000148516.21 TPM= 3.86 Transcript Type= protein_coding
chr10	31319125	31529202	31319125	31529202	+	ENST00000320985.14@ZEB1	ENST00000320985.14	protein_coding	31319125,31461037,31495779,31502348,31510673,31514603,31520126,31523933,31526672	31319292,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529202	Gene ID= ENSG00000148516.21 TPM= 10.62 Transcript Type= protein_coding
chr10	31805404	31928876	31805404	31928876	-	ENST00000375245.8@ARHGAP12	ENST00000375245.8	protein_coding	31928683,31910525,31908172,31861395,31852517,31843461,31839637,31839305,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31805404	31928876,31910563,31908926,31861658,31852597,31843586,31839711,31839319,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832	Gene ID= ENSG00000165322.17 TPM= 1.93 Transcript Type= protein_coding
chr10	31806306	31928807	31806306	31928807	-	ENST00000344936.6@ARHGAP12	ENST00000344936.6	protein_coding	31928683,31910525,31908172,31861395,31854066,31852517,31843461,31839637,31839305,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31806306	31928807,31910563,31908926,31861658,31854206,31852597,31843586,31839711,31839319,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832	Gene ID= ENSG00000165322.17 TPM= 4.83 Transcript Type= protein_coding
chr10	32009010	32056431	32009010	32056431	-	ENST00000302418.4@KIF5B	ENST00000302418.4	protein_coding	32055848,32048464,32040384,32039327,32038778,32038163,32037520,32037254,32035890,32035522,32034690,32033845,32032706,32031073,32028428,32022848,32022140,32021226,32021022,32019858,32018502,32018316,32018052,32017143,32015509,32009010	32056431,32048551,32040457,32039431,32038826,32038218,32037607,32037378,32035994,32035667,32034838,32034038,32032774,32031279,32028571,32023036,32022257,32021287,32021131,32019959,32018562,32018387,32018156,32017359,32015659,32011516	Gene ID= ENSG00000170759.10 TPM= 20.27 Transcript Type= protein_coding
chr10	32267751	32347218	32267751	32347218	-	ENST00000319778.10@EPC1	ENST00000319778.10	protein_coding	32346763,32305772,32293592,32292988,32292496,32291163,32287098,32286926,32286694,32284698,32273163,32272026,32271554,32267751	32347218,32305931,32293737,32293194,32292644,32291322,32287274,32287015,32286842,32285050,32273281,32272167,32271917,32269135	Gene ID= ENSG00000120616.15 TPM= 6.76 Transcript Type= protein_coding
chr10	32345112	32347218	32345112	32347218	-	ENST00000480402.1@EPC1	ENST00000480402.1	protein_coding	32346763,32345112	32347218,32345562	Gene ID= ENSG00000120616.15 TPM= 9.65 Transcript Type= processed_transcript
chr10	32345111	32347153	32345111	32347153	-	transcript1103.chr10.nnic@NA	transcript1103.chr10.nnic	NA	32345111	32347153	Gene ID= novel_gene_chr10_1104 TPM= 3.86 Transcript Type= NA
chr10	32900402	32958327	32900402	32958327	-	transcript1113.chr10.nic@ITGB1	transcript1113.chr10.nic	protein_coding	32958145,32935492,32932515,32929822,32928094,32925871,32923585,32922640,32922257,32920245,32919885,32911886,32911448,32910223,32908368,32907063,32900402	32958327,32935558,32932600,32930044,32928264,32926109,32923740,32922735,32922346,32920385,32920084,32912124,32911670,32910455,32908534,32907143,32901635	Gene ID= ENSG00000150093.18 TPM= 91.46 Transcript Type= NA
chr10	32900319	32935558	32900319	32935558	-	ENST00000423113.5@ITGB1	ENST00000423113.5	protein_coding	32935492,32932515,32929822,32928094,32925871,32923585,32922640,32922257,32920245,32919885,32911886,32911448,32910223,32908368,32907063,32900319	32935558,32932600,32930044,32928264,32926109,32923740,32922735,32922346,32920385,32920084,32912124,32911670,32910455,32908534,32907143,32901635	Gene ID= ENSG00000150093.18 TPM= 4.1 Transcript Type= protein_coding
chr10	32900392	32958209	32900392	32958209	-	ENST00000302278.7@ITGB1	ENST00000302278.7	protein_coding	32958145,32935492,32932515,32929822,32928094,32925871,32923585,32922640,32922257,32920245,32919885,32911886,32911448,32910223,32908368,32900392	32958209,32935558,32932600,32930044,32928264,32926109,32923740,32922735,32922346,32920385,32920084,32912124,32911670,32910455,32908534,32901635	Gene ID= ENSG00000150093.18 TPM= 38.85 Transcript Type= protein_coding
chr10	33194367	33334692	33194367	33334692	-	transcript1128.chr10.nnic@NRP1	transcript1128.chr10.nnic	protein_coding	33334310,33330708,33270675,33263646,33256316,33254028,33226134,33221719,33213386,33207572,33202891,33197650,33194367	33334692,33330882,33270856,33263873,33256471,33254194,33226289,33221865,33213717,33207718,33202995,33197709,33194780	Gene ID= ENSG00000099250.17 TPM= 14.48 Transcript Type= NA
chr10	34109561	34815344	34109561	34815344	-	transcript1132.chr10.nic@PARD3	transcript1132.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34331117,34317107,34269657,34131463,34119613,34109561	34815344,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34331344,34317338,34269899,34131583,34119740,34111562	Gene ID= ENSG00000148498.15 TPM= 9.78 Transcript Type= NA
chr10	34312264	34815344	34312264	34815344	-	transcript1140.chr10.nic@PARD3	transcript1140.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34331117,34317107,34312264	34815344,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34331344,34317338,34312382	Gene ID= ENSG00000148498.15 TPM= 13.64 Transcript Type= NA
chr10	34317206	34815344	34317206	34815344	-	transcript1141.chr10.nic@PARD3	transcript1141.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34336199,34331117,34317206	34815344,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338	Gene ID= ENSG00000148498.15 TPM= 10.9 Transcript Type= NA
chr10	34317206	34815344	34317206	34815344	-	transcript1142.chr10.nic@PARD3	transcript1142.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337365,34336199,34331117,34317206	34815344,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338	Gene ID= ENSG00000148498.15 TPM= 3.66 Transcript Type= NA
chr10	34317206	34815344	34317206	34815344	-	transcript1151.chr10.nic@PARD3	transcript1151.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34331117,34317206	34815344,34696419,34517159,34470263,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34331344,34317338	Gene ID= ENSG00000148498.15 TPM= 11.31 Transcript Type= NA
chr10	34312260	34815325	34312260	34815325	-	ENST00000340077.9@PARD3	ENST00000340077.9	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34336199,34331117,34317107,34312260	34815325,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382	Gene ID= ENSG00000148498.15 TPM= 9.45 Transcript Type= protein_coding
chr10	35008551	35090364	35008551	35090364	-	ENST00000374748.5@CUL2	ENST00000374748.5	protein_coding	35090179,35089896,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35008551	35090364,35090001,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442	Gene ID= ENSG00000108094.14 TPM= 1.69 Transcript Type= protein_coding
chr10	35008551	35090642	35008551	35090642	-	ENST00000374751.7@CUL2	ENST00000374751.7	protein_coding	35090430,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35008551	35090642,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442	Gene ID= ENSG00000108094.14 TPM= 3.62 Transcript Type= protein_coding
chr10	35009870	35090397	35009870	35090397	-	transcript1161.chr10.nic@CUL2	transcript1161.chr10.nic	protein_coding	35089896,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35009870	35090397,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442	Gene ID= ENSG00000108094.14 TPM= 19.31 Transcript Type= NA
chr10	35009870	35090372	35009870	35090372	-	transcript1165.chr10.nic@CUL2	transcript1165.chr10.nic	protein_coding	35090179,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35009870	35090372,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35010442	Gene ID= ENSG00000108094.14 TPM= 2.9 Transcript Type= NA
chr10	35008552	35090642	35008552	35090642	-	ENST00000626172.2@CUL2	ENST00000626172.2	protein_coding	35090430,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35008552	35090642,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35010442	Gene ID= ENSG00000108094.14 TPM= 1.69 Transcript Type= protein_coding
chr10	35008551	35090366	35008551	35090366	-	ENST00000374749.7@CUL2	ENST00000374749.7	protein_coding	35090179,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35008551	35090366,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442	Gene ID= ENSG00000108094.14 TPM= 3.62 Transcript Type= protein_coding
chr10	35127084	35212435	35127084	35212435	+	transcript1174.chr10.nic@CREM	transcript1174.chr10.nic	protein_coding	35127084,35148368,35178889,35179134,35206895,35211254	35127193,35148491,35178986,35179276,35207051,35212435	Gene ID= ENSG00000095794.19 TPM= 1.93 Transcript Type= NA
chr10	35126942	35211876	35126942	35211876	+	transcript1175.chr10.nic@CREM	transcript1175.chr10.nic	protein_coding	35126942,35148368,35178889,35179134,35206895,35211656	35127193,35148491,35178986,35179276,35207051,35211876	Gene ID= ENSG00000095794.19 TPM= 1.93 Transcript Type= NA
chr10	35126923	35179847	35126923	35179847	+	ENST00000374726.7@CREM	ENST00000374726.7	protein_coding	35126923,35148368,35178889,35179134	35127193,35148491,35178986,35179847	Gene ID= ENSG00000095794.19 TPM= 5.79 Transcript Type= protein_coding
chr10	35126791	35212125	35126791	35212125	+	ENST00000474362.5@CREM	ENST00000474362.5	protein_coding	35126791,35206895,35211656	35127193,35207051,35212125	Gene ID= ENSG00000095794.19 TPM= 1.93 Transcript Type= protein_coding
chr10	35336519	35569743	35336519	35569743	+	transcript1211.chr10.nnic@CCNY	transcript1211.chr10.nnic	protein_coding	35336519,35483404,35501501,35516523,35529973,35530124,35553019,35566023,35569054	35337207,35483478,35501535,35516623,35530030,35530243,35553185,35566185,35569743	Gene ID= ENSG00000108100.17 TPM= 3.86 Transcript Type= NA
chr10	35569335	35571788	35569335	35571788	+	transcript1224.chr10.nnic@NA	transcript1224.chr10.nnic	NA	35569335	35571788	Gene ID= novel_gene_chr10_1225 TPM= 1.93 Transcript Type= NA
chr10	37828765	37858084	37828765	37858084	-	ENST00000357328.8@ZNF248	ENST00000357328.8	protein_coding	37858005,37856435,37856296,37837985,37837617,37828765	37858084,37856532,37856337,37838111,37837712,37833116	Gene ID= ENSG00000198105.13 TPM= 2.9 Transcript Type= protein_coding
chr10	37949865	37976611	37949865	37976611	-	transcript1238.chr10.nnic@ZNF25	transcript1238.chr10.nnic	protein_coding	37976506,37971708,37967917,37957420,37957020,37956790,37953695,37949865	37976611,37971807,37967939,37957546,37957115,37956908,37953758,37953195	Gene ID= ENSG00000175395.15 TPM= 2.41 Transcript Type= NA
chr10	37872957	37976673	37872957	37976673	-	transcript1242.chr10.nnic@ZNF25	transcript1242.chr10.nnic	protein_coding	37976506,37971708,37957420,37957020,37953695,37873893,37872957	37976673,37971807,37957546,37957115,37953758,37874010,37873199	Gene ID= ENSG00000175395.15 TPM= 1.93 Transcript Type= NA
chr10	37949865	37976565	37949865	37976565	-	transcript1244.chr10.nnic@ZNF25	transcript1244.chr10.nnic	protein_coding	37976506,37971708,37970294,37957420,37957020,37953695,37949865	37976565,37971807,37970357,37957546,37957115,37953758,37953195	Gene ID= ENSG00000175395.15 TPM= 3.38 Transcript Type= NA
chr10	37949865	37976659	37949865	37976659	-	transcript1245.chr10.nnic@ZNF25	transcript1245.chr10.nnic	protein_coding	37976506,37971915,37971708,37957420,37957020,37953695,37949865	37976659,37972021,37971807,37957546,37957115,37953758,37953195	Gene ID= ENSG00000175395.15 TPM= 5.31 Transcript Type= NA
chr10	37950567	37976627	37950567	37976627	-	ENST00000374633.5@ZNF25	ENST00000374633.5	protein_coding	37976506,37971708,37967917,37957420,37957020,37953695,37950567	37976627,37971807,37967939,37957546,37957115,37953758,37953195	Gene ID= ENSG00000175395.15 TPM= 16.41 Transcript Type= processed_transcript
chr10	38010670	38060053	38010670	38060053	+	ENST00000458705.6@ZNF33A	ENST00000458705.6	protein_coding	38010670,38012298,38016871,38017291,38054378	38010783,38012350,38017015,38017386,38060053	Gene ID= ENSG00000189180.15 TPM= 2.9 Transcript Type= protein_coding
chr10	42589111	42638606	42589111	42638606	-	transcript1280.chr10.nic@ZNF33B	transcript1280.chr10.nic	protein_coding	42638474,42636920,42632295,42631929,42614282,42589111	42638606,42636972,42632439,42632024,42614358,42594699	Gene ID= ENSG00000196693.14 TPM= 2.9 Transcript Type= NA
chr10	42592230	42638606	42592230	42638606	-	transcript1284.chr10.nic@ZNF33B	transcript1284.chr10.nic	protein_coding	42638474,42636920,42631929,42614282,42592230	42638606,42636972,42632024,42614358,42594699	Gene ID= ENSG00000196693.14 TPM= 3.86 Transcript Type= NA
chr10	42782515	42817388	42782515	42817388	+	transcript1290.chr10.nic@BMS1	transcript1290.chr10.nic	protein_coding	42782515,42784362,42785482,42787168,42790323,42791627,42792493,42792957,42793852,42796474,42797422,42798468,42802137,42816599,42817318	42782830,42784570,42785672,42787247,42790511,42791769,42792614,42793144,42793991,42797231,42797523,42798625,42802218,42816672,42817388	Gene ID= ENSG00000165733.7 TPM= 3.38 Transcript Type= NA
chr10	43137862	43185308	43137862	43185308	+	transcript1300.chr10.nnic@CSGALNACT2	transcript1300.chr10.nnic	protein_coding	43137862,43154897,43158715,43160494,43163866,43175951,43183250	43138567,43155810,43158931,43160595,43164044,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 3.86 Transcript Type= NA
chr10	43138450	43185308	43138450	43185308	+	transcript1302.chr10.nnic@CSGALNACT2	transcript1302.chr10.nnic	protein_coding	43138450,43154897,43160494,43163866,43167004,43175951,43183250	43138567,43155810,43160595,43164044,43167098,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 1.93 Transcript Type= NA
chr10	43138449	43185308	43138449	43185308	+	transcript1303.chr10.nnic@CSGALNACT2	transcript1303.chr10.nnic	protein_coding	43138449,43154897,43158715,43160494,43175951,43183250	43138567,43155810,43158931,43160595,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 5.79 Transcript Type= NA
chr10	43137862	43185308	43137862	43185308	+	transcript1306.chr10.nnic@CSGALNACT2	transcript1306.chr10.nnic	protein_coding	43137862,43175951,43183250	43138567,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 2.9 Transcript Type= NA
chr10	43138486	43185308	43138486	43185308	+	ENST00000374466.3@CSGALNACT2	ENST00000374466.3	protein_coding	43138486,43154897,43158715,43160494,43163866,43167004,43175951,43183250	43138567,43155810,43158931,43160595,43164044,43167098,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 33.79 Transcript Type= protein_coding
chr10	43385617	43407819	43385617	43407819	-	ENST00000357065.8@HNRNPF	ENST00000357065.8	protein_coding	43407717,43396456,43394630,43385617	43407819,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 7 Transcript Type= protein_coding
chr10	43385617	43409238	43385617	43409238	-	transcript1311.chr10.nnic@HNRNPF	transcript1311.chr10.nnic	protein_coding	43409131,43396456,43394630,43385617	43409238,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 10.21 Transcript Type= NA
chr10	43385617	43397346	43385617	43397346	-	ENST00000544000.5@HNRNPF	ENST00000544000.5	protein_coding	43397185,43396456,43394630,43385617	43397346,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 7.96 Transcript Type= protein_coding
chr10	43385617	43408882	43385617	43408882	-	ENST00000356053.7@HNRNPF	ENST00000356053.7	protein_coding	43408727,43396456,43394630,43385617	43408882,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 1.21 Transcript Type= protein_coding
chr10	43386022	43409166	43386022	43409166	-	ENST00000337970.7@HNRNPF	ENST00000337970.7	protein_coding	43409090,43396456,43394630,43386022	43409166,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 29.92 Transcript Type= protein_coding
chr10	43606407	43617903	43606407	43617903	+	ENST00000361807.7@ZNF485	ENST00000361807.7	protein_coding	43606407,43606997,43608614,43609255,43616291	43606546,43607074,43608740,43609350,43617903	Gene ID= ENSG00000198298.12 TPM= 4.83 Transcript Type= protein_coding
chr10	43643859	43648856	43643859	43648856	-	ENST00000374433.6@ZNF32	ENST00000374433.6	protein_coding	43648802,43646064,43643859	43648856,43646202,43644801	Gene ID= ENSG00000169740.13 TPM= 56.95 Transcript Type= protein_coding
chr10	43643860	43648704	43643860	43648704	-	ENST00000395797.1@ZNF32	ENST00000395797.1	protein_coding	43648585,43646064,43643860	43648704,43646202,43644801	Gene ID= ENSG00000169740.13 TPM= 7.72 Transcript Type= protein_coding
chr10	44377133	44385092	44377133	44385092	-	ENST00000343575.10@CXCL12	ENST00000343575.10	protein_coding	44384945,44380763,44377133	44385092,44380880,44378723	Gene ID= ENSG00000107562.16 TPM= 8.69 Transcript Type= protein_coding
chr10	44959757	44994707	44959757	44994707	+	transcript1354.chr10.nic@RASSF4	transcript1354.chr10.nic	protein_coding	44959757,44970165,44971773,44982521,44983941,44984813,44989274,44989670,44990948,44991905,44993269	44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994707	Gene ID= ENSG00000107551.20 TPM= 11.58 Transcript Type= NA
chr10	44959757	44994714	44959757	44994714	+	transcript1357.chr10.nic@RASSF4	transcript1357.chr10.nic	protein_coding	44959757,44970165,44971773,44982521,44984022,44984813,44989274,44989670,44990948,44991905	44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44994714	Gene ID= ENSG00000107551.20 TPM= 8.21 Transcript Type= NA
chr10	44959407	44994707	44959407	44994707	+	ENST00000489171.5@RASSF4	ENST00000489171.5	protein_coding	44959407,44970165,44982521,44984022,44984813,44989274,44989670,44990948,44991905,44993269	44959866,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994707	Gene ID= ENSG00000107551.20 TPM= 9.17 Transcript Type= retained_intron
chr10	44976129	44978810	44976129	44978810	-	ENST00000298295.3@C10orf10	ENST00000298295.3	protein_coding	44978618,44976129	44978810,44978055	Gene ID= ENSG00000165507.8 TPM= 24.13 Transcript Type= protein_coding
chr10	45000475	45005326	45000475	45005326	+	ENST00000298299.3@ZNF22	ENST00000298299.3	protein_coding	45000475,45003280	45000978,45005326	Gene ID= ENSG00000165512.4 TPM= 31.86 Transcript Type= protein_coding
chr10	45374227	45446115	45374227	45446115	+	ENST00000374391.6@ALOX5	ENST00000374391.6	protein_coding	45374227,45382483,45395855,45412191,45424041,45424960,45428618,45440430,45441344,45443038,45443416,45443728,45444116,45445508	45374429,45382681,45395936,45412313,45424147,45425132,45428764,45440633,45441430,45443216,45443537,45443828,45444286,45446115	Gene ID= ENSG00000012779.10 TPM= 2.9 Transcript Type= protein_coding
chr10	45638643	45672785	45638643	45672785	-	transcript1381.chr10.nic@ZFAND4	transcript1381.chr10.nic	protein_coding	45672250,45663542,45651966,45648294,45638643	45672785,45663842,45652033,45648534,45639963	Gene ID= ENSG00000172671.19 TPM= 1.93 Transcript Type= NA
chr10	45727200	45792961	45727200	45792961	+	ENST00000540872.5@WASHC2C	ENST00000540872.5	protein_coding	45727200,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 9.89 Transcript Type= protein_coding
chr10	45727203	45792961	45727203	45792961	+	transcript1396.chr10.nnic@WASHC2C	transcript1396.chr10.nnic	protein_coding	45727203,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 5.07 Transcript Type= NA
chr10	45727236	45792961	45727236	45792961	+	ENST00000336378.8@WASHC2C	ENST00000336378.8	protein_coding	45727236,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757010,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755113,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 5.07 Transcript Type= protein_coding
chr10	45727219	45792961	45727219	45792961	+	ENST00000374362.6@WASHC2C	ENST00000374362.6	protein_coding	45727219,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 11.83 Transcript Type= protein_coding
chr10	45972449	46003734	45972449	46003734	+	ENST00000580018.3@TIMM23	ENST00000580018.3	protein_coding	45972449,45975454,45982523,45982846,45985383,45988737,46003203	45972730,45975512,45982616,45982930,45985441,45988847,46003734	Gene ID= ENSG00000265354.3 TPM= 74.81 Transcript Type= protein_coding
chr10	45972479	46003734	45972479	46003734	+	transcript1432.chr10.nnic@TIMM23	transcript1432.chr10.nnic	protein_coding	45972479,45975454,45982523,45982846,45988737,46003203	45972730,45975512,45982616,45982930,45988847,46003734	Gene ID= ENSG00000265354.3 TPM= 5.31 Transcript Type= NA
chr10	46005091	46030714	46005091	46030714	-	ENST00000581486.5@NCOA4	ENST00000581486.5	protein_coding	46030526,46016540,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46005091	46030714,46016694,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597	Gene ID= ENSG00000266412.5 TPM= 215.67 Transcript Type= protein_coding
chr10	46005091	46030626	46005091	46030626	-	transcript1417.chr10.nic@NCOA4	transcript1417.chr10.nic	protein_coding	46030526,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46005091	46030626,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597	Gene ID= ENSG00000266412.5 TPM= 39.5 Transcript Type= NA
chr10	46005088	46023455	46005088	46023455	-	ENST00000585132.5@NCOA4	ENST00000585132.5	protein_coding	46023330,46016540,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46005088	46023455,46016694,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597	Gene ID= ENSG00000266412.5 TPM= 25.67 Transcript Type= protein_coding
chr10	46911428	47002322	46911428	47002322	+	ENST00000395722.7@PTPN20	ENST00000395722.7	protein_coding	46911428,46943918,46946563,46999912,47000676	46911501,46944015,46946675,46999974,47002322	Gene ID= ENSG00000204179.10 TPM= 3.86 Transcript Type= protein_coding
chr10	46911415	47002320	46911415	47002320	+	transcript1445.chr10.nnic@PTPN20	transcript1445.chr10.nnic	protein_coding	46911415,46999912,47000676	46911501,46999974,47002320	Gene ID= ENSG00000204179.10 TPM= 1.93 Transcript Type= NA
chr10	47537481	47553642	47537481	47553642	-	transcript1447.chr10.nic@AL591684.2	transcript1447.chr10.nic	processed_transcript	47553479,47551744,47550658,47549305,47545432,47544389,47543542,47542167,47537481	47553642,47551952,47550847,47549384,47545620,47544529,47543663,47542306,47539161	Gene ID= ENSG00000254929.6 TPM= 1.93 Transcript Type= NA
chr10	47548601	47553516	47548601	47553516	-	transcript1449.chr10.nic@AL591684.2	transcript1449.chr10.nic	processed_transcript	47553479,47551744,47550658,47548601	47553516,47551952,47550847,47549384	Gene ID= ENSG00000254929.6 TPM= 1.93 Transcript Type= NA
chr10	48321091	48324183	48321091	48324183	-	transcript1452.chr10.nnic@NA	transcript1452.chr10.nnic	NA	48321091	48324183	Gene ID= novel_gene_chr10_1453 TPM= 2.9 Transcript Type= NA
chr10	49299157	49316245	49299157	49316245	+	transcript1464.chr10.nic@C10orf71	transcript1464.chr10.nic	protein_coding	49299157,49316145	49299233,49316245	Gene ID= ENSG00000177354.11 TPM= 3.86 Transcript Type= NA
chr10	49299210	49316246	49299210	49316246	+	transcript1465.chr10.nnic@C10orf71	transcript1465.chr10.nnic	protein_coding	49299210,49316145	49299289,49316246	Gene ID= ENSG00000177354.11 TPM= 2.9 Transcript Type= NA
chr10	49299193	49327487	49299193	49327487	+	ENST00000374144.7@C10orf71	ENST00000374144.7	protein_coding	49299193,49316145,49322402	49299233,49316247,49327487	Gene ID= ENSG00000177354.11 TPM= 113.91 Transcript Type= protein_coding
chr10	49299274	49316247	49299274	49316247	+	ENST00000470615.1@C10orf71	ENST00000470615.1	protein_coding	49299274,49316145	49299454,49316247	Gene ID= ENSG00000177354.11 TPM= 2.9 Transcript Type= processed_transcript
chr10	49326460	49330144	49326460	49330144	+	transcript1469.chr10.nnic@NA	transcript1469.chr10.nnic	NA	49326460	49330144	Gene ID= novel_gene_chr10_1470 TPM= 32.82 Transcript Type= NA
chr10	49515201	49539040	49515201	49539040	-	ENST00000447839.6@ERCC6	ENST00000447839.6	protein_coding	49538962,49532543,49530720,49528417,49524033,49515201	49539040,49532978,49530840,49528525,49524777,49517121	Gene ID= ENSG00000225830.12 TPM= 1.93 Transcript Type= protein_coding
chr10	49818279	49942008	49818279	49942008	-	transcript1489.chr10.nnic@PARG	transcript1489.chr10.nnic	protein_coding	49941509,49935076,49933177,49932096,49922547,49922336,49915917,49885203,49879673,49869476,49865321,49861588,49857306,49843554,49841950,49832803,49820165,49818279	49942008,49935142,49934163,49932283,49922669,49922419,49915991,49885295,49879830,49869555,49865381,49861663,49857453,49843632,49842058,49832908,49820293,49819494	Gene ID= ENSG00000227345.8 TPM= 6.44 Transcript Type= NA
chr10	49818279	49942026	49818279	49942026	-	transcript1490.chr10.nnic@PARG	transcript1490.chr10.nnic	protein_coding	49941935,49935076,49933177,49932096,49922547,49922336,49915917,49885203,49879673,49869476,49865321,49861588,49857306,49843554,49841950,49832803,49820165,49818279	49942026,49935142,49934163,49932283,49922669,49922419,49915991,49885295,49879830,49869555,49865381,49861663,49857453,49843632,49842058,49832908,49820293,49819494	Gene ID= ENSG00000227345.8 TPM= 2.9 Transcript Type= NA
chr10	49942049	49974850	49942049	49974850	+	ENST00000478381.5@TIMM23B	ENST00000478381.5	protein_coding	49942049,49943235,49945032,49952126,49952449,49955002,49958370,49973012	49942300,49943358,49945090,49952219,49952533,49955060,49958480,49974850	Gene ID= ENSG00000204152.10 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr10	49942033	49973477	49942033	49973477	+	ENST00000374098.6@TIMM23B	ENST00000374098.6	protein_coding	49942033,49945032,49952126,49952449,49955002,49958370,49973012	49942300,49945090,49952219,49952533,49955060,49958480,49973477	Gene ID= ENSG00000204152.10 TPM= 2.9 Transcript Type= protein_coding
chr10	50067888	50133506	50067888	50133506	+	ENST00000351071.10@WASHC2A	ENST00000351071.10	protein_coding	50067888,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 10.14 Transcript Type= protein_coding
chr10	50067888	50133506	50067888	50133506	+	ENST00000314664.11@WASHC2A	ENST00000314664.11	protein_coding	50067888,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 7.24 Transcript Type= protein_coding
chr10	50067891	50133506	50067891	50133506	+	transcript1517.chr10.nnic@WASHC2A	transcript1517.chr10.nnic	protein_coding	50067891,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50093268,50093860,50095148,50095599,50097675,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50093386,50093917,50095207,50095778,50097802,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 3.86 Transcript Type= NA
chr10	50067961	50133146	50067961	50133146	+	ENST00000282633.9@WASHC2A	ENST00000282633.9	protein_coding	50067961,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133146	Gene ID= ENSG00000099290.15 TPM= 2.9 Transcript Type= protein_coding
chr10	50459207	50623959	50459207	50623959	-	transcript1530.chr10.nic@SGMS1	transcript1530.chr10.nic	protein_coding	50623707,50590153,50519831,50466890,50460673,50459207	50623959,50590247,50519921,50466932,50460814,50460152	Gene ID= ENSG00000198964.13 TPM= 1.93 Transcript Type= NA
chr10	50305600	50623983	50305600	50623983	-	ENST00000361781.6@SGMS1	ENST00000361781.6	protein_coding	50623707,50590153,50519831,50466890,50460673,50433476,50343492,50327205,50311262,50307982,50305600	50623983,50590247,50519921,50466932,50460814,50433556,50344345,50327322,50311415,50308148,50307321	Gene ID= ENSG00000198964.13 TPM= 1.93 Transcript Type= protein_coding
chr10	50739318	50757188	50739318	50757188	+	ENST00000374007.5@ASAH2B	ENST00000374007.5	protein_coding	50739318,50742915,50745128,50749343,50752468,50754551	50740002,50743010,50745274,50749402,50752556,50757188	Gene ID= ENSG00000204147.9 TPM= 3.86 Transcript Type= protein_coding
chr10	50988060	50991759	50988060	50991759	-	transcript1541.chr10.nnic@NA	transcript1541.chr10.nnic	NA	50988060	50991759	Gene ID= novel_gene_chr10_1542 TPM= 3.86 Transcript Type= NA
chr10	50990712	50991129	50990712	50991129	-	transcript1539.chr10.nnic@NA	transcript1539.chr10.nnic	NA	50990712	50991129	Gene ID= novel_gene_chr10_1540 TPM= 2.9 Transcript Type= NA
chr10	51467721	51470202	51467721	51470202	+	transcript1545.chr10.nnic@NA	transcript1545.chr10.nnic	NA	51467721	51470202	Gene ID= novel_gene_chr10_1546 TPM= 2.9 Transcript Type= NA
chr10	51695487	51699591	51695487	51699591	-	ENST00000331173.5@CSTF2T	ENST00000331173.5	protein_coding	51695487	51699591	Gene ID= ENSG00000177613.8 TPM= 4.83 Transcript Type= protein_coding
chr10	52128312	52295099	52128312	52295099	+	transcript1553.chr10.nnic@PRKG1	transcript1553.chr10.nnic	protein_coding	52128312,52133840,52161889,52251570,52271350,52272392,52280789,52282153,52288726,52288931,52290224,52293802	52128541,52133905,52161963,52251666,52271489,52272481,52280930,52282316,52288848,52288993,52290290,52295099	Gene ID= ENSG00000185532.15 TPM= 3.86 Transcript Type= NA
chr10	52250780	52251212	52250780	52251212	+	transcript1559.chr10.nnic@NA	transcript1559.chr10.nnic	NA	52250780	52251212	Gene ID= novel_gene_chr10_1560 TPM= 3.86 Transcript Type= NA
chr10	52295311	52298251	52295311	52298251	+	transcript1561.chr10.nnic@NA	transcript1561.chr10.nnic	NA	52295311	52298251	Gene ID= novel_gene_chr10_1562 TPM= 1.93 Transcript Type= NA
chr10	58191517	58267934	58191517	58267934	-	ENST00000373935.3@IPMK	ENST00000373935.3	protein_coding	58267422,58237729,58227043,58216145,58199240,58191517	58267934,58237814,58227139,58216317,58199321,58196698	Gene ID= ENSG00000151151.5 TPM= 3.86 Transcript Type= protein_coding
chr10	58269058	58289586	58269058	58289586	+	ENST00000333926.5@CISD1	ENST00000333926.5	protein_coding	58269058,58277117,58287561	58269304,58277322,58289586	Gene ID= ENSG00000122873.11 TPM= 17.38 Transcript Type= protein_coding
chr10	58334975	58370753	58334975	58370753	+	ENST00000373910.8@UBE2D1	ENST00000373910.8	protein_coding	58334975,58361338,58361495,58363609,58364771,58367923,58368720	58335225,58361401,58361526,58363686,58364876,58368016,58370753	Gene ID= ENSG00000072401.14 TPM= 143.83 Transcript Type= protein_coding
chr10	58334979	58370751	58334979	58370751	+	ENST00000615793.1@UBE2D1	ENST00000615793.1	protein_coding	58334979,58361338,58363609,58364771,58367923,58368720	58335225,58361401,58363686,58364876,58368016,58370751	Gene ID= ENSG00000072401.14 TPM= 3.86 Transcript Type= protein_coding
chr10	58385022	58399221	58385022	58399221	+	ENST00000487519.5@TFAM	ENST00000487519.5	protein_coding	58385022,58386220,58388190,58388670,58390765,58394358,58394928	58385648,58386338,58388260,58388819,58390860,58394414,58399221	Gene ID= ENSG00000108064.10 TPM= 1.93 Transcript Type= protein_coding
chr10	58512815	58514797	58512815	58514797	+	transcript1603.chr10.nnic@NA	transcript1603.chr10.nnic	NA	58512815	58514797	Gene ID= novel_gene_chr10_1604 TPM= 1.93 Transcript Type= NA
chr10	59650988	59709837	59650988	59709837	-	transcript1610.chr10.nnic@SLC16A9	transcript1610.chr10.nnic	protein_coding	59709479,59707106,59684096,59672770,59664227,59653675,59650988	59709837,59707188,59684327,59672913,59664322,59654589,59652950	Gene ID= ENSG00000165449.11 TPM= 1.93 Transcript Type= NA
chr10	59736995	59753457	59736995	59753457	-	transcript1620.chr10.nnic@MRLN	transcript1620.chr10.nnic	protein_coding	59753354,59738459,59736995	59753457,59738573,59737220	Gene ID= ENSG00000227877.6 TPM= 7 Transcript Type= NA
chr10	59736995	59753445	59736995	59753445	-	ENST00000414264.5@MRLN	ENST00000414264.5	protein_coding	59753354,59738459,59736995	59753445,59738562,59737220	Gene ID= ENSG00000227877.6 TPM= 101.6 Transcript Type= protein_coding
chr10	59736995	59753396	59736995	59753396	-	ENST00000430431.5@MRLN	ENST00000430431.5	protein_coding	59753354,59738998,59738459,59736995	59753396,59739119,59738562,59737220	Gene ID= ENSG00000227877.6 TPM= 25.82 Transcript Type= protein_coding
chr10	59736995	59753445	59736995	59753445	-	ENST00000594536.5@MRLN	ENST00000594536.5	protein_coding	59753354,59738998,59738459,59736995	59753445,59739095,59738562,59737220	Gene ID= ENSG00000227877.6 TPM= 7.48 Transcript Type= protein_coding
chr10	60029691	60139371	60029691	60139371	-	transcript1628.chr10.nic@ANK3	transcript1628.chr10.nic	protein_coding	60139338,60138964,60137342,60134271,60114225,60108830,60105905,60088147,60086677,60085157,60084602,60083492,60082615,60080573,60067935,60064157,60063111,60059698,60059340,60055658,60053677,60051475,60044265,60044074,60042672,60029691	60139371,60139087,60137353,60134358,60114331,60109054,60106059,60088358,60086884,60085253,60084830,60083617,60082737,60080618,60068009,60064288,60063254,60060006,60059430,60056036,60053727,60051561,60044348,60044133,60042759,60029826	Gene ID= ENSG00000151150.21 TPM= 1.93 Transcript Type= NA
chr10	60029691	60140069	60029691	60140069	-	transcript1629.chr10.nic@ANK3	transcript1629.chr10.nic	protein_coding	60139985,60138964,60137342,60134271,60114225,60108830,60105905,60088147,60086677,60085157,60084602,60083492,60082615,60080573,60067935,60064157,60063111,60059698,60059340,60055658,60053677,60051475,60044265,60044074,60042672,60029691	60140069,60139087,60137353,60134358,60114331,60109054,60106059,60088358,60086884,60085253,60084830,60083617,60082737,60080618,60068009,60064288,60063254,60060006,60059430,60056036,60053727,60051561,60044348,60044133,60042759,60029826	Gene ID= ENSG00000151150.21 TPM= 1.93 Transcript Type= NA
chr10	60029691	60141017	60029691	60141017	-	transcript1630.chr10.nic@ANK3	transcript1630.chr10.nic	protein_coding	60140352,60138964,60137342,60134271,60114225,60108830,60105905,60088147,60086677,60085157,60084602,60083492,60082615,60080573,60067935,60064157,60063111,60059698,60059340,60055658,60053677,60051475,60044265,60044074,60042672,60029691	60141017,60139087,60137353,60134358,60114331,60109054,60106059,60088358,60086884,60085253,60084830,60083617,60082737,60080618,60068009,60064288,60063254,60060006,60059430,60056036,60053727,60051561,60044348,60044133,60042759,60029826	Gene ID= ENSG00000151150.21 TPM= 4.83 Transcript Type= NA
chr10	60029691	60141017	60029691	60141017	-	transcript1639.chr10.nic@ANK3	transcript1639.chr10.nic	protein_coding	60140352,60138964,60137342,60134271,60114225,60108830,60105905,60088147,60086677,60085157,60084602,60083492,60082615,60080573,60067935,60064157,60063111,60059340,60055658,60053677,60051475,60044265,60044074,60042672,60029691	60141017,60139087,60137353,60134358,60114331,60109054,60106059,60088358,60086884,60085253,60084830,60083617,60082737,60080618,60068009,60064288,60063254,60060006,60056036,60053727,60051561,60044348,60044133,60042759,60029826	Gene ID= ENSG00000151150.21 TPM= 4.83 Transcript Type= NA
chr10	60871457	60944726	60871457	60944726	-	transcript1656.chr10.nnic@RHOBTB1	transcript1656.chr10.nnic	protein_coding	60944650,60941804,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60872185,60871457	60944726,60941854,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290,60871651	Gene ID= ENSG00000072422.16 TPM= 1.93 Transcript Type= NA
chr10	60869438	60944327	60869438	60944327	-	transcript1657.chr10.nnic@RHOBTB1	transcript1657.chr10.nnic	protein_coding	60943971,60941804,60911351,60910887,60892810,60888212,60886112,60874954,60872185,60869438	60944327,60941854,60911552,60910990,60892995,60889185,60886230,60875042,60872290,60871651	Gene ID= ENSG00000072422.16 TPM= 4.34 Transcript Type= NA
chr10	60909319	60944327	60909319	60944327	-	transcript1661.chr10.nic@RHOBTB1	transcript1661.chr10.nic	protein_coding	60943971,60941804,60911351,60909319	60944327,60941854,60911552,60910990	Gene ID= ENSG00000072422.16 TPM= 1.93 Transcript Type= NA
chr10	60869438	60944247	60869438	60944247	-	ENST00000337910.9@RHOBTB1	ENST00000337910.9	protein_coding	60943971,60941804,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60872185,60869438	60944247,60941854,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290,60871651	Gene ID= ENSG00000072422.16 TPM= 11.1 Transcript Type= protein_coding
chr10	62049190	62085848	62049190	62085848	+	transcript1671.chr10.nic@ARID5B	transcript1671.chr10.nic	protein_coding	62049190,62050888,62057117,62059243,62069700,62085702	62049483,62051000,62057318,62059295,62069797,62085848	Gene ID= ENSG00000150347.14 TPM= 61.78 Transcript Type= NA
chr10	62049190	62054404	62049190	62054404	+	transcript1677.chr10.nic@ARID5B	transcript1677.chr10.nic	protein_coding	62049190,62050888	62049483,62054404	Gene ID= ENSG00000150347.14 TPM= 12.55 Transcript Type= NA
chr10	62070041	62072545	62070041	62072545	-	transcript1680.chr10.nnic@NA	transcript1680.chr10.nnic	NA	62070041	62072545	Gene ID= novel_gene_chr10_1681 TPM= 1.93 Transcript Type= NA
chr10	62804857	62808483	62804857	62808483	+	ENST00000373783.2@ADO	ENST00000373783.2	protein_coding	62804857	62808483	Gene ID= ENSG00000181915.4 TPM= 4.83 Transcript Type= protein_coding
chr10	63133339	63155026	63133339	63155026	+	transcript1687.chr10.nnic@NRBF2	transcript1687.chr10.nnic	protein_coding	63133339,63139691,63146209,63152150,63153511	63133500,63139837,63146293,63152190,63155026	Gene ID= ENSG00000148572.15 TPM= 2.25 Transcript Type= NA
chr10	63133247	63155031	63133247	63155031	+	ENST00000435510.6@NRBF2	ENST00000435510.6	protein_coding	63133247,63152150,63153511	63133500,63152190,63155031	Gene ID= ENSG00000148572.15 TPM= 1.28 Transcript Type= protein_coding
chr10	63133290	63155026	63133290	63155026	+	ENST00000277746.10@NRBF2	ENST00000277746.10	protein_coding	63133290,63146209,63152150,63153511	63133500,63146293,63152190,63155026	Gene ID= ENSG00000148572.15 TPM= 35.07 Transcript Type= protein_coding
chr10	63465229	63466563	63465229	63466563	+	ENST00000609436.1@JMJD1C-AS1	ENST00000609436.1	antisense_RNA	63465229	63466563	Gene ID= ENSG00000272767.1 TPM= 1.93 Transcript Type= antisense_RNA
chr10	63521331	63624575	63521331	63624575	+	transcript1695.chr10.nic@REEP3	transcript1695.chr10.nic	protein_coding	63521331,63566338,63594778,63598024,63599170,63599670,63610187,63619655,63620813	63521577,63566410,63594854,63598144,63599283,63599712,63610334,63619800,63624575	Gene ID= ENSG00000165476.13 TPM= 14.48 Transcript Type= NA
chr10	63521331	63610291	63521331	63610291	+	transcript1701.chr10.nic@REEP3	transcript1701.chr10.nic	protein_coding	63521331,63566338,63594778,63598024,63599170,63610187	63521577,63566410,63594854,63598144,63599283,63610291	Gene ID= ENSG00000165476.13 TPM= 1.93 Transcript Type= NA
chr10	65912518	67696169	65912518	67696169	-	ENST00000433211.6@CTNNA3	ENST00000433211.6	protein_coding	67696000,67647415,67606857,67539503,67521842,67219607,67180317,66775444,66766264,66621692,66520617,66379152,66280470,66103157,66069308,65988692,65966612,65912518	67696169,67647518,67607049,67539669,67521961,67219870,67180520,66775524,66766416,66621784,66520773,66379352,66280621,66103249,66069489,65988797,65966746,65920617	Gene ID= ENSG00000183230.16 TPM= 2.9 Transcript Type= protein_coding
chr10	67796665	67838164	67796665	67838164	-	ENST00000225171.6@DNAJC12	ENST00000225171.6	protein_coding	67837934,67823314,67811524,67805583,67796665	67838164,67823392,67811663,67805787,67797210	Gene ID= ENSG00000108176.14 TPM= 4.83 Transcript Type= protein_coding
chr10	67884669	67918390	67884669	67918390	+	ENST00000212015.10@SIRT1	ENST00000212015.10	protein_coding	67884669,67887417,67888882,67891402,67906790,67908046,67909256,67912474,67916265	67885151,67887533,67889123,67891554,67906937,67908125,67909442,67913031,67918390	Gene ID= ENSG00000096717.11 TPM= 31.86 Transcript Type= protein_coding
chr10	67922489	68075348	67922489	68075348	-	ENST00000373700.8@HERC4	ENST00000373700.8	protein_coding	68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966683,67956878,67954963,67954595,67940939,67939588,67936153,67932597,67925085,67922489	68075348,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802,67956976,67955130,67954738,67941105,67939654,67936235,67932780,67925187,67923139	Gene ID= ENSG00000148634.15 TPM= 5.79 Transcript Type= protein_coding
chr10	67921908	68075283	67921908	68075283	-	ENST00000395198.7@HERC4	ENST00000395198.7	protein_coding	68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966683,67959113,67956878,67954963,67954595,67940939,67939588,67936153,67932597,67925085,67921908	68075283,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802,67959136,67956976,67955130,67954738,67941105,67939654,67936235,67932780,67925187,67923139	Gene ID= ENSG00000148634.15 TPM= 2.9 Transcript Type= protein_coding
chr10	68106084	68211699	68106084	68211699	+	transcript1738.chr10.nic@MYPN	transcript1738.chr10.nic	protein_coding	68106084,68142940,68145475,68148353,68150040,68158486,68161729,68165702,68166294,68174066,68175323,68188905,68194363,68195450,68197352,68199368,68201829,68206770,68210286	68106801,68143115,68145526,68148467,68150111,68158627,68161752,68165818,68166666,68174656,68175461,68189126,68194512,68195532,68197478,68199575,68201994,68206903,68211699	Gene ID= ENSG00000138347.15 TPM= 55.34 Transcript Type= NA
chr10	68106121	68211699	68106121	68211699	+	transcript1739.chr10.nnic@MYPN	transcript1739.chr10.nnic	protein_coding	68106121,68142940,68145475,68148353,68150040,68158486,68161729,68165702,68166294,68174066,68175323,68188905,68194363,68195450,68197352,68199368,68201829,68206770,68210286	68106183,68143115,68145526,68148467,68150111,68158627,68161752,68165818,68166666,68174656,68175461,68189126,68194512,68195532,68197478,68199575,68201994,68206903,68211699	Gene ID= ENSG00000138347.15 TPM= 53.41 Transcript Type= NA
chr10	68212470	68214116	68212470	68214116	-	transcript1760.chr10.nnic@NA	transcript1760.chr10.nnic	NA	68212470	68214116	Gene ID= novel_gene_chr10_1761 TPM= 8.69 Transcript Type= NA
chr10	68214691	68217146	68214691	68217146	+	transcript1756.chr10.nnic@NA	transcript1756.chr10.nnic	NA	68214691	68217146	Gene ID= novel_gene_chr10_1757 TPM= 3.86 Transcript Type= NA
chr10	68216870	68223577	68216870	68223577	+	transcript1758.chr10.nnic@NA	transcript1758.chr10.nnic	NA	68216870	68223577	Gene ID= novel_gene_chr10_1759 TPM= 13.51 Transcript Type= NA
chr10	68282660	68332927	68282660	68332927	-	ENST00000358769.6@PBLD	ENST00000358769.6	protein_coding	68332784,68306761,68296886,68296266,68292129,68292010,68288931,68288483,68285348,68282660	68332927,68306903,68296985,68296364,68292238,68292039,68289019,68288661,68285410,68284289	Gene ID= ENSG00000108187.15 TPM= 1.93 Transcript Type= protein_coding
chr10	68332097	68342271	68332097	68342271	+	transcript1769.chr10.nic@HNRNPH3	transcript1769.chr10.nic	protein_coding	68332097,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332235,68337333,68337996,68338642,68339226,68339555,68341309,68341680,68341851,68342271	Gene ID= ENSG00000096746.17 TPM= 1.93 Transcript Type= NA
chr10	68332031	68343191	68332031	68343191	+	transcript1773.chr10.nic@HNRNPH3	transcript1773.chr10.nic	protein_coding	68332031,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332235,68337333,68337996,68338687,68339226,68339555,68341309,68341680,68341851,68343191	Gene ID= ENSG00000096746.17 TPM= 11.58 Transcript Type= NA
chr10	68332031	68343191	68332031	68343191	+	transcript1782.chr10.nic@HNRNPH3	transcript1782.chr10.nic	protein_coding	68332031,68337199,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332235,68337333,68338642,68339226,68339555,68341309,68341680,68341851,68343191	Gene ID= ENSG00000096746.17 TPM= 1.93 Transcript Type= NA
chr10	68332059	68343191	68332059	68343191	+	transcript1786.chr10.nic@HNRNPH3	transcript1786.chr10.nic	protein_coding	68332059,68337199,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332216,68337333,68338687,68339226,68339555,68341309,68341680,68341851,68343191	Gene ID= ENSG00000096746.17 TPM= 6.76 Transcript Type= NA
chr10	68332031	68343191	68332031	68343191	+	transcript1788.chr10.nic@HNRNPH3	transcript1788.chr10.nic	protein_coding	68332031,68337199,68339140,68339440,68341174,68341585,68341759,68341978	68332235,68338687,68339226,68339555,68341309,68341680,68341851,68343191	Gene ID= ENSG00000096746.17 TPM= 1.93 Transcript Type= NA
chr10	68332075	68343187	68332075	68343187	+	ENST00000265866.11@HNRNPH3	ENST00000265866.11	protein_coding	68332075,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332216,68337333,68337996,68338687,68339226,68339555,68341309,68341680,68341851,68343187	Gene ID= ENSG00000096746.17 TPM= 21.24 Transcript Type= protein_coding
chr10	68332122	68342272	68332122	68342272	+	ENST00000354695.5@HNRNPH3	ENST00000354695.5	protein_coding	68332122,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332216,68337333,68337996,68338642,68339226,68339555,68341309,68341680,68341851,68342272	Gene ID= ENSG00000096746.17 TPM= 2.9 Transcript Type= protein_coding
chr10	68487074	68527503	68487074	68527503	-	transcript1806.chr10.nic@SLC25A16	transcript1806.chr10.nic	protein_coding	68527246,68516751,68506585,68503632,68493449,68493132,68488467,68487074	68527503,68516843,68506718,68503695,68493570,68493198,68488629,68487212	Gene ID= ENSG00000122912.14 TPM= 1.93 Transcript Type= NA
chr10	68721185	68771431	68721185	68771431	+	transcript1808.chr10.nic@CCAR1	transcript1808.chr10.nic	protein_coding	68721185,68722455,68736876,68737845,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68756273,68757294,68761007,68765888,68771206	68721282,68722577,68737048,68737889,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68756483,68757377,68761192,68766079,68771431	Gene ID= ENSG00000060339.13 TPM= 1.93 Transcript Type= NA
chr10	68721144	68792375	68721144	68792375	+	ENST00000630771.2@CCAR1	ENST00000630771.2	protein_coding	68721144,68722455,68736876,68737845,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68757294,68761007,68765888,68771206,68772988,68786136,68786546,68787927,68788143,68789710,68791207	68721282,68722577,68737048,68737889,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68757377,68761192,68766079,68771445,68773099,68786218,68786692,68788047,68788328,68789915,68792375	Gene ID= ENSG00000060339.13 TPM= 8.69 Transcript Type= protein_coding
chr10	68721237	68771301	68721237	68771301	+	transcript1813.chr10.nnic@CCAR1	transcript1813.chr10.nnic	protein_coding	68721237,68722455,68736876,68737845,68740629,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68757294,68761007,68765888,68771206	68721282,68722577,68737048,68737889,68740661,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68757377,68761192,68766079,68771301	Gene ID= ENSG00000060339.13 TPM= 1.93 Transcript Type= NA
chr10	68901264	68946847	68901264	68946847	+	transcript1817.chr10.nic@DDX50	transcript1817.chr10.nic	protein_coding	68901264,68906226,68906711,68910307,68911068,68913162,68913391,68914059,68919832,68934199,68934799,68936006,68936936,68941060,68943213,68946352	68901471,68906337,68907007,68910382,68911246,68913279,68913576,68914204,68919981,68934360,68934918,68936079,68937095,68941194,68943257,68946847	Gene ID= ENSG00000107625.12 TPM= 8.69 Transcript Type= NA
chr10	68901278	68946847	68901278	68946847	+	ENST00000373585.7@DDX50	ENST00000373585.7	protein_coding	68901278,68906711,68910307,68911068,68913162,68913391,68914059,68919832,68934199,68934799,68936006,68936936,68941060,68943213,68946352	68901471,68907007,68910382,68911246,68913279,68913576,68914204,68919981,68934360,68934918,68936079,68937095,68941194,68943257,68946847	Gene ID= ENSG00000107625.12 TPM= 42.47 Transcript Type= protein_coding
chr10	68956128	68985073	68956128	68985073	+	ENST00000354185.8@DDX21	ENST00000354185.8	protein_coding	68956128,68959806,68962082,68963291,68965377,68967018,68968976,68970201,68971891,68973545,68974670,68977529,68978842,68981537,68982543	68956312,68960249,68962157,68963469,68965494,68967203,68969121,68970350,68972052,68973664,68974743,68977688,68978976,68981581,68985073	Gene ID= ENSG00000165732.12 TPM= 64.68 Transcript Type= protein_coding
chr10	68956440	68985067	68956440	68985067	+	ENST00000620315.1@DDX21	ENST00000620315.1	protein_coding	68956440,68959806,68962082,68963291,68965377,68967018,68968976,68970201,68971891,68973545,68974670,68977529,68978842,68981537,68982543	68956748,68960249,68962157,68963469,68965494,68967203,68969121,68970350,68972052,68973664,68974743,68977688,68978976,68981581,68985067	Gene ID= ENSG00000165732.12 TPM= 6.76 Transcript Type= protein_coding
chr10	68988750	69016929	68988750	69016929	+	ENST00000638119.1@KIF1BP	ENST00000638119.1	protein_coding	68988750,68995204,69000424,69005046,69005732,69008841,69010900,69015541	68989258,68995278,69000522,69005125,69005915,69008925,69011015,69016929	Gene ID= ENSG00000198954.7 TPM= 1.45 Transcript Type= protein_coding
chr10	68988721	69016982	68988721	69016982	+	ENST00000361983.6@KIF1BP	ENST00000361983.6	protein_coding	68988721,69000424,69005046,69005732,69008841,69010900,69015541	68989258,69000522,69005125,69005915,69008925,69011015,69016982	Gene ID= ENSG00000198954.7 TPM= 60.33 Transcript Type= protein_coding
chr10	69088118	69104811	69088118	69104811	+	ENST00000242465.3@SRGN	ENST00000242465.3	protein_coding	69088118,69097084,69103871	69088236,69097231,69104811	Gene ID= ENSG00000122862.4 TPM= 8.69 Transcript Type= protein_coding
chr10	69124166	69172856	69124166	69172856	+	transcript1852.chr10.nic@VPS26A	transcript1852.chr10.nic	protein_coding	69124166,69132898,69157007,69158047,69162406,69166042,69168489,69171156	69124280,69133047,69157163,69158211,69162512,69166110,69168631,69172856	Gene ID= ENSG00000122958.14 TPM= 16.89 Transcript Type= NA
chr10	69124152	69172856	69124152	69172856	+	ENST00000263559.10@VPS26A	ENST00000263559.10	protein_coding	69124152,69132898,69155812,69157007,69158047,69162406,69166042,69168489,69171156	69124280,69133047,69155887,69157163,69158211,69162512,69166110,69168631,69172856	Gene ID= ENSG00000122958.14 TPM= 108.6 Transcript Type= protein_coding
chr10	69180253	69209098	69180253	69209098	+	transcript1855.chr10.nic@SUPV3L1	transcript1855.chr10.nic	protein_coding	69180253,69182520,69185987,69186443,69187642,69189267,69191655,69195188,69196992,69198372,69199104,69200280,69202439,69202867,69207793,69208600	69180562,69182654,69186064,69186550,69187756,69189435,69191766,69195265,69197083,69198552,69199197,69200499,69202519,69203043,69207941,69209098	Gene ID= ENSG00000156502.13 TPM= 11.75 Transcript Type= NA
chr10	69180232	69209098	69180232	69209098	+	ENST00000359655.8@SUPV3L1	ENST00000359655.8	protein_coding	69180232,69185987,69186443,69187642,69189267,69191655,69195188,69196992,69198372,69199104,69200280,69202439,69202867,69207793,69208600	69180562,69186064,69186550,69187756,69189435,69191766,69195265,69197083,69198552,69199197,69200499,69202519,69203043,69207941,69209098	Gene ID= ENSG00000156502.13 TPM= 59.05 Transcript Type= protein_coding
chr10	69180231	69209098	69180231	69209098	+	transcript1858.chr10.nnic@SUPV3L1	transcript1858.chr10.nnic	protein_coding	69180231,69185987,69186443,69187642,69189267,69191655,69195188,69196992,69198372,69199104,69200317,69202439,69202867,69207793,69208600	69180562,69186064,69186550,69187756,69189435,69191766,69195265,69197083,69198552,69199197,69200499,69202519,69203043,69207941,69209098	Gene ID= ENSG00000156502.13 TPM= 4.51 Transcript Type= NA
chr10	69180250	69193263	69180250	69193263	+	ENST00000471069.5@SUPV3L1	ENST00000471069.5	protein_coding	69180250,69185987,69186443,69187642,69189267,69191655	69180562,69186064,69186550,69187756,69189435,69193263	Gene ID= ENSG00000156502.13 TPM= 9.65 Transcript Type= retained_intron
chr10	69189648	69192917	69189648	69192917	-	transcript1869.chr10.nnic@NA	transcript1869.chr10.nnic	NA	69189648	69192917	Gene ID= novel_gene_chr10_1870 TPM= 1.93 Transcript Type= NA
chr10	69318844	69401882	69318844	69401882	+	ENST00000359426.6@HK1	ENST00000359426.6	protein_coding	69318844,69343827,69359897,69364783,69368536,69369237,69369441,69376934,69379862,69382487,69384333,69384796,69386323,69389197,69392125,69394950,69398595,69400991	69319010,69343989,69360045,69364902,69368631,69369336,69369624,69377089,69380095,69382791,69384481,69384915,69386418,69389296,69392308,69395105,69398828,69401882	Gene ID= ENSG00000156515.21 TPM= 797.27 Transcript Type= protein_coding
chr10	69403903	69409282	69403903	69409282	-	ENST00000373307.5@TACR2	ENST00000373307.5	protein_coding	69408922,69407084,69403903	69409282,69407280,69405084	Gene ID= ENSG00000075073.14 TPM= 1.93 Transcript Type= protein_coding
chr10	69451473	69507669	69451473	69507669	+	ENST00000373290.6@TSPAN15	ENST00000373290.6	protein_coding	69451473,69483691,69485141,69495594,69498280,69504438,69506124,69506829	69451690,69483876,69485215,69495689,69498396,69504485,69506240,69507669	Gene ID= ENSG00000099282.9 TPM= 17.38 Transcript Type= protein_coding
chr10	69630258	69633599	69630258	69633599	+	ENST00000373279.5@C10orf35	ENST00000373279.5	protein_coding	69630258,69631480,69631709,69632790	69630313,69631547,69631839,69633599	Gene ID= ENSG00000171224.8 TPM= 8.69 Transcript Type= protein_coding
chr10	70052796	70112280	70052796	70112280	+	ENST00000373255.8@H2AFY2	ENST00000373255.8	protein_coding	70052796,70075600,70090060,70091757,70093735,70095654,70100208,70109033,70111518	70053000,70075830,70090166,70091954,70093845,70095753,70100297,70109207,70112280	Gene ID= ENSG00000099284.13 TPM= 9.65 Transcript Type= protein_coding
chr10	70081902	70132924	70081902	70132924	-	transcript1916.chr10.nnic@AIFM2	transcript1916.chr10.nnic	protein_coding	70132734,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70114145,70081902	70132924,70124097,70123520,70121211,70120599,70117920,70116774,70115120,70114329,70082390	Gene ID= ENSG00000042286.14 TPM= 2.9 Transcript Type= NA
chr10	70110425	70132924	70110425	70132924	-	transcript1918.chr10.nnic@AIFM2	transcript1918.chr10.nnic	protein_coding	70132734,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70114145,70110425	70132924,70124097,70123520,70121211,70120599,70117920,70116774,70115120,70114329,70111919	Gene ID= ENSG00000042286.14 TPM= 2.9 Transcript Type= NA
chr10	70112271	70132934	70112271	70132934	-	ENST00000307864.2@AIFM2	ENST00000307864.2	protein_coding	70132734,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70112271	70132934,70124097,70123520,70121211,70120599,70117920,70116774,70115120,70114329	Gene ID= ENSG00000042286.14 TPM= 14.48 Transcript Type= protein_coding
chr10	70137981	70146656	70137981	70146656	-	ENST00000335494.5@TYSND1	ENST00000335494.5	protein_coding	70145421,70137981	70146656,70140141	Gene ID= ENSG00000156521.13 TPM= 2.9 Transcript Type= protein_coding
chr10	70150204	70163031	70150204	70163031	-	ENST00000373238.5@SAR1A	ENST00000373238.5	protein_coding	70162690,70161858,70161619,70161004,70157764,70153838,70150204	70163031,70161931,70161738,70161069,70157867,70153969,70152592	Gene ID= ENSG00000079332.14 TPM= 1.61 Transcript Type= protein_coding
chr10	70149548	70170512	70149548	70170512	-	transcript1935.chr10.nnic@SAR1A	transcript1935.chr10.nnic	protein_coding	70170413,70161619,70161004,70157764,70153838,70149548	70170512,70161738,70161069,70157867,70153969,70152592	Gene ID= ENSG00000079332.14 TPM= 3.86 Transcript Type= NA
chr10	70150204	70170523	70150204	70170523	-	ENST00000373241.8@SAR1A	ENST00000373241.8	protein_coding	70170413,70161858,70161619,70161004,70157764,70153838,70150204	70170523,70161931,70161738,70161069,70157867,70153969,70152592	Gene ID= ENSG00000079332.14 TPM= 105.87 Transcript Type= protein_coding
chr10	70202830	70233427	70202830	70233427	-	ENST00000373232.7@PPA1	ENST00000373232.7	protein_coding	70233264,70230341,70218764,70217812,70214500,70213463,70209558,70209205,70206264,70204873,70202830	70233427,70230399,70218817,70217931,70214586,70213589,70209685,70209290,70206333,70204915,70203186	Gene ID= ENSG00000180817.11 TPM= 163.14 Transcript Type= protein_coding
chr10	70298973	70381914	70298973	70381914	-	ENST00000355790.8@LRRC20	ENST00000355790.8	protein_coding	70381500,70376452,70340553,70323863,70298973	70381914,70376596,70340702,70324030,70301508	Gene ID= ENSG00000172731.13 TPM= 30.39 Transcript Type= protein_coding
chr10	70298970	70382650	70298970	70382650	-	ENST00000395010.5@LRRC20	ENST00000395010.5	protein_coding	70382549,70340553,70323863,70298970	70382650,70340702,70324030,70301508	Gene ID= ENSG00000172731.13 TPM= 19.45 Transcript Type= protein_coding
chr10	70298976	70382626	70298976	70382626	-	ENST00000358141.6@LRRC20	ENST00000358141.6	protein_coding	70382549,70376452,70323863,70298976	70382626,70376596,70324030,70301508	Gene ID= ENSG00000172731.13 TPM= 16.87 Transcript Type= protein_coding
chr10	70298976	70382626	70298976	70382626	-	ENST00000357631.6@LRRC20	ENST00000357631.6	protein_coding	70382549,70376452,70340553,70298976	70382626,70376596,70340702,70301508	Gene ID= ENSG00000172731.13 TPM= 12.94 Transcript Type= protein_coding
chr10	70298973	70382589	70298973	70382589	-	ENST00000373224.5@LRRC20	ENST00000373224.5	protein_coding	70382494,70376452,70340553,70323863,70298973	70382589,70376596,70340702,70324030,70301508	Gene ID= ENSG00000172731.13 TPM= 16.87 Transcript Type= protein_coding
chr10	70404141	70422037	70404141	70422037	+	transcript1967.chr10.nnic@EIF4EBP2	transcript1967.chr10.nnic	protein_coding	70404141,70404355,70419914,70421716	70404318,70404546,70420099,70422037	Gene ID= ENSG00000148730.6 TPM= 5.79 Transcript Type= NA
chr10	70404147	70410658	70404147	70410658	+	transcript1975.chr10.nnic@EIF4EBP2	transcript1975.chr10.nnic	protein_coding	70404147,70409800	70404546,70410658	Gene ID= ENSG00000148730.6 TPM= 2.9 Transcript Type= NA
chr10	70404379	70428618	70404379	70428618	+	ENST00000373218.4@EIF4EBP2	ENST00000373218.4	protein_coding	70404379,70419914,70421716	70404546,70420099,70428618	Gene ID= ENSG00000148730.6 TPM= 42.47 Transcript Type= protein_coding
chr10	70478821	70568449	70478821	70568449	+	ENST00000263563.6@PALD1	ENST00000263563.6	protein_coding	70478821,70525923,70529229,70529889,70531290,70532621,70532995,70533922,70534425,70534739,70537811,70538280,70538892,70539092,70539580,70541102,70541463,70547306,70564364,70566581	70479059,70526136,70529331,70530068,70531454,70532781,70533070,70534073,70534524,70534843,70537906,70538408,70539008,70539247,70539762,70541242,70541534,70547446,70564519,70568449	Gene ID= ENSG00000107719.8 TPM= 5.79 Transcript Type= protein_coding
chr10	70597348	70602759	70597348	70602759	-	ENST00000373209.2@PRF1	ENST00000373209.2	protein_coding	70602645,70600364,70597348	70602759,70600906,70599181	Gene ID= ENSG00000180644.7 TPM= 2.9 Transcript Type= protein_coding
chr10	70882280	70888612	70882280	70888612	-	transcript1990.chr10.nic@PCBD1	transcript1990.chr10.nic	protein_coding	70888531,70885798,70885152,70882280	70888612,70885929,70885232,70882485	Gene ID= ENSG00000166228.8 TPM= 8.69 Transcript Type= NA
chr10	70883510	70888784	70883510	70888784	-	ENST00000299299.3@PCBD1	ENST00000299299.3	protein_coding	70888531,70885798,70885152,70883510	70888784,70885929,70885232,70884048	Gene ID= ENSG00000166228.8 TPM= 66.61 Transcript Type= protein_coding
chr10	70882280	70885899	70882280	70885899	-	ENST00000493961.5@PCBD1	ENST00000493961.5	protein_coding	70885798,70885152,70882280	70885899,70885232,70882485	Gene ID= ENSG00000166228.8 TPM= 1.93 Transcript Type= processed_transcript
chr10	71747559	71773498	71747559	71773498	-	ENST00000394957.7@VSIR	ENST00000394957.7	protein_coding	71773358,71761598,71760868,71755359,71752975,71751668,71747559	71773498,71762026,71760924,71755466,71753002,71751861,71751290	Gene ID= ENSG00000107738.19 TPM= 2.9 Transcript Type= protein_coding
chr10	71769272	71773525	71769272	71773525	-	transcript1999.chr10.nnic@NA	transcript1999.chr10.nnic	NA	71769272	71773525	Gene ID= novel_gene_chr10_2000 TPM= 1.93 Transcript Type= NA
chr10	71816298	71851375	71816298	71851375	-	ENST00000394936.7@PSAP	ENST00000394936.7	protein_coding	71851182,71834372,71831846,71831126,71828877,71828014,71825837,71821876,71820240,71819714,71819465,71819031,71818617,71816298	71851375,71834505,71831920,71831251,71829077,71828157,71825893,71822007,71820335,71819900,71819622,71819111,71818724,71817476	Gene ID= ENSG00000197746.13 TPM= 1449.7 Transcript Type= protein_coding
chr10	71963538	72005955	71963538	72005955	+	transcript2044.chr10.nic@CHST3	transcript2044.chr10.nic	protein_coding	71963538,72005736	71964694,72005955	Gene ID= ENSG00000122863.5 TPM= 4.83 Transcript Type= NA
chr10	71967977	71973004	71967977	71973004	-	transcript2045.chr10.nnic@NA	transcript2045.chr10.nnic	NA	71967977	71973004	Gene ID= novel_gene_chr10_2046 TPM= 27.03 Transcript Type= NA
chr10	72096520	72216306	72096520	72216306	-	transcript2053.chr10.nnic@ASCC1	transcript2053.chr10.nnic	protein_coding	72216207,72213187,72210732,72203427,72196811,72161538,72152869,72133057,72096520	72216306,72213331,72210831,72203524,72196989,72161674,72152988,72133181,72097450	Gene ID= ENSG00000138303.17 TPM= 11.1 Transcript Type= NA
chr10	72096521	72216288	72096521	72216288	-	ENST00000317168.10@ASCC1	ENST00000317168.10	protein_coding	72216207,72213187,72210732,72203427,72196811,72161538,72152869,72133057,72128082,72096521	72216288,72213331,72210831,72203524,72196989,72161674,72152988,72133181,72128167,72097450	Gene ID= ENSG00000138303.17 TPM= 15.93 Transcript Type= protein_coding
chr10	72215998	72233829	72215998	72233829	+	transcript2063.chr10.nnic@ANAPC16	transcript2063.chr10.nnic	protein_coding	72215998,72220054,72223888,72230366,72233001	72216072,72220379,72224056,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 14.72 Transcript Type= NA
chr10	72216000	72235858	72216000	72235858	+	ENST00000621663.4@ANAPC16	ENST00000621663.4	protein_coding	72216000,72220054,72223888,72230366,72233001	72216138,72220379,72224056,72230440,72235858	Gene ID= ENSG00000166295.8 TPM= 11.58 Transcript Type= protein_coding
chr10	72215981	72233829	72215981	72233829	+	transcript2074.chr10.nic@ANAPC16	transcript2074.chr10.nic	protein_coding	72215981,72223888,72230366,72233001	72216072,72224056,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 18.58 Transcript Type= NA
chr10	72216023	72224154	72216023	72224154	+	transcript2088.chr10.nic@ANAPC16	transcript2088.chr10.nic	protein_coding	72216023,72220054,72223888	72216138,72220379,72224154	Gene ID= ENSG00000166295.8 TPM= 6.76 Transcript Type= NA
chr10	72216023	72233829	72216023	72233829	+	transcript2090.chr10.nnic@ANAPC16	transcript2090.chr10.nnic	protein_coding	72216023,72230366,72233001	72216138,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 7.96 Transcript Type= NA
chr10	72273920	72276036	72273920	72276036	+	ENST00000307365.3@DDIT4	ENST00000307365.3	protein_coding	72273920,72274157,72274695	72274060,72274421,72276036	Gene ID= ENSG00000168209.4 TPM= 631.31 Transcript Type= protein_coding
chr10	72332866	72354998	72332866	72354998	-	transcript2107.chr10.nic@DNAJB12	transcript2107.chr10.nic	protein_coding	72354765,72344950,72343366,72340985,72340789,72338202,72336524,72335834,72332866	72354998,72345127,72343511,72341170,72340868,72338311,72336696,72335931,72334617	Gene ID= ENSG00000148719.14 TPM= 34.75 Transcript Type= NA
chr10	72332830	72355149	72332830	72355149	-	ENST00000338820.7@DNAJB12	ENST00000338820.7	protein_coding	72354765,72344950,72343366,72340985,72340789,72338202,72336524,72332830	72355149,72345127,72343511,72341170,72340868,72338311,72336696,72335931	Gene ID= ENSG00000148719.14 TPM= 9.65 Transcript Type= protein_coding
chr10	72367327	72626191	72367327	72626191	-	ENST00000398761.8@MICU1	ENST00000398761.8	protein_coding	72626010,72566633,72562895,72551179,72533742,72508155,72477174,72475100,72423234,72407929,72375783,72367327	72626191,72566794,72563063,72551341,72533789,72508271,72477256,72475297,72423371,72408037,72375872,72368355	Gene ID= ENSG00000107745.18 TPM= 11.58 Transcript Type= protein_coding
chr10	72367340	72626105	72367340	72626105	-	ENST00000361114.9@MICU1	ENST00000361114.9	protein_coding	72626010,72566633,72562895,72551179,72533746,72508155,72477174,72475100,72423234,72407929,72375783,72367340	72626105,72566794,72563063,72551341,72533789,72508269,72477256,72475297,72423371,72408037,72375872,72368355	Gene ID= ENSG00000107745.18 TPM= 11.58 Transcript Type= protein_coding
chr10	72692131	72887694	72692131	72887694	+	ENST00000373053.7@MCU	ENST00000373053.7	protein_coding	72692131,72834359,72859177,72860423,72868703,72871377,72884266,72885745	72692301,72834428,72859347,72860527,72868863,72871580,72884382,72887694	Gene ID= ENSG00000156026.14 TPM= 67.57 Transcript Type= protein_coding
chr10	73007224	73096974	73007224	73096974	-	ENST00000394890.6@P4HA1	ENST00000394890.6	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73044981,73030271,73016846,73014224,73010969,73009807,73007224	73096974,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73045051,73030370,73016899,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 176.95 Transcript Type= protein_coding
chr10	73007217	73096850	73007217	73096850	-	ENST00000307116.6@P4HA1	ENST00000307116.6	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73044981,73030267,73016846,73014224,73010969,73009807,73007217	73096850,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73045051,73030370,73016895,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 42.77 Transcript Type= protein_coding
chr10	73007217	73096850	73007217	73096850	-	ENST00000373008.6@P4HA1	ENST00000373008.6	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73043887,73030267,73016846,73014224,73010969,73009807,73007217	73096850,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73043957,73030370,73016895,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 23.47 Transcript Type= protein_coding
chr10	73110459	73131828	73110459	73131828	+	ENST00000357321.8@NUDT13	ENST00000357321.8	protein_coding	73110459,73114357,73120018,73122175,73124214,73125118,73125398,73126673,73130703	73110567,73114448,73120157,73122309,73124320,73125243,73125509,73126827,73131828	Gene ID= ENSG00000166321.13 TPM= 1.93 Transcript Type= protein_coding
chr10	73133656	73168059	73133656	73168059	-	ENST00000372979.8@ECD	ENST00000372979.8	protein_coding	73167866,73163733,73160434,73156568,73156275,73154256,73152293,73148276,73146276,73139631,73139309,73138003,73136704,73133656	73168059,73163950,73160551,73156655,73156453,73154448,73152421,73148404,73146361,73139737,73139495,73138070,73136918,73134813	Gene ID= ENSG00000122882.10 TPM= 5.79 Transcript Type= protein_coding
chr10	73168120	73242180	73168120	73242180	+	transcript2188.chr10.nic@FAM149B1	transcript2188.chr10.nic	protein_coding	73168120,73174687,73177846,73192556,73193477,73208619,73210251,73228060,73230422,73232939,73234817,73235193,73239312,73240946	73168386,73174791,73177975,73192698,73193593,73208786,73210438,73228160,73230525,73233163,73234940,73235318,73239384,73242180	Gene ID= ENSG00000138286.14 TPM= 2.9 Transcript Type= NA
chr10	73168120	73242180	73168120	73242180	+	transcript2189.chr10.nic@FAM149B1	transcript2189.chr10.nic	protein_coding	73168120,73174687,73177846,73192556,73193477,73208619,73210251,73228060,73230422,73232939,73234817,73235193,73239312,73240946	73168386,73174791,73177975,73192698,73193593,73208786,73210438,73228184,73230525,73233197,73234940,73235318,73239384,73242180	Gene ID= ENSG00000138286.14 TPM= 2.9 Transcript Type= NA
chr10	73248843	73252693	73248843	73252693	-	ENST00000372945.7@MRPS16	ENST00000372945.7	protein_coding	73252470,73251763,73248843	73252693,73252023,73250991	Gene ID= ENSG00000182180.13 TPM= 153.48 Transcript Type= protein_coding
chr10	73248843	73252625	73248843	73252625	-	ENST00000479005.1@MRPS16	ENST00000479005.1	protein_coding	73252470,73251763,73248843	73252625,73252037,73250991	Gene ID= ENSG00000182180.13 TPM= 29.92 Transcript Type= processed_transcript
chr10	73375101	73414067	73375101	73414067	-	ENST00000372921.9@ANXA7	ENST00000372921.9	protein_coding	73414012,73400803,73398181,73397164,73396519,73388312,73387689,73383577,73383175,73380031,73379879,73378911,73375101	73414067,73400857,73398385,73397274,73396583,73388414,73387783,73383690,73383345,73380201,73379954,73379023,73376217	Gene ID= ENSG00000138279.15 TPM= 2.9 Transcript Type= protein_coding
chr10	73375445	73414067	73375445	73414067	-	ENST00000372919.8@ANXA7	ENST00000372919.8	protein_coding	73414012,73400803,73398181,73397164,73396519,73396044,73388312,73387689,73383577,73383175,73380031,73379879,73378911,73375445	73414067,73400857,73398385,73397274,73396583,73396109,73388414,73387783,73383690,73383345,73380201,73379954,73379023,73376217	Gene ID= ENSG00000138279.15 TPM= 415.08 Transcript Type= protein_coding
chr10	73423581	73433561	73423581	73433561	-	ENST00000299432.6@MSS51	ENST00000299432.6	protein_coding	73433513,73428064,73427613,73426607,73425811,73425098,73423581	73433561,73428301,73427768,73426731,73426377,73425191,73424772	Gene ID= ENSG00000166343.9 TPM= 13.51 Transcript Type= protein_coding
chr10	73436641	73496030	73436641	73496030	-	transcript2246.chr10.nic@PPP3CB	transcript2246.chr10.nic	protein_coding	73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73448664,73446492,73444725,73439872,73436641	73496030,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73448690,73446576,73444822,73439901,73438420	Gene ID= ENSG00000107758.15 TPM= 2.9 Transcript Type= NA
chr10	73436806	73466474	73436806	73466474	-	transcript2257.chr10.nnic@PPP3CB	transcript2257.chr10.nnic	protein_coding	73466371,73454412,73446492,73444725,73439872,73436806	73466474,73454489,73446573,73444822,73439901,73438420	Gene ID= ENSG00000107758.15 TPM= 56.95 Transcript Type= NA
chr10	73436806	73496024	73436806	73496024	-	ENST00000394829.6@PPP3CB	ENST00000394829.6	protein_coding	73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73444725,73439872,73436806	73496024,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446576,73444822,73439901,73438420	Gene ID= ENSG00000107758.15 TPM= 40.54 Transcript Type= protein_coding
chr10	73443780	73495996	73443780	73495996	-	ENST00000342558.3@PPP3CB	ENST00000342558.3	protein_coding	73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73443780	73495996,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446573,73444822	Gene ID= ENSG00000107758.15 TPM= 3.86 Transcript Type= protein_coding
chr10	73518722	73576337	73518722	73576337	-	ENST00000498143.5@USP54	ENST00000498143.5	protein_coding	73575795,73575512,73571421,73545538,73543018,73542803,73541633,73541375,73539444,73536269,73534600,73530704,73530143,73529680,73526647,73523583,73520908,73518722	73576337,73575675,73571513,73545672,73543131,73542885,73541738,73541521,73539593,73536437,73534770,73530835,73530523,73529911,73526780,73523750,73521027,73519992	Gene ID= ENSG00000166348.18 TPM= 3.86 Transcript Type= retained_intron
chr10	73516559	73519160	73516559	73519160	+	transcript2264.chr10.nnic@NA	transcript2264.chr10.nnic	NA	73516559	73519160	Gene ID= novel_gene_chr10_2265 TPM= 50.2 Transcript Type= NA
chr10	73631654	73641757	73631654	73641757	-	ENST00000359322.4@MYOZ1	ENST00000359322.4	protein_coding	73641411,73639945,73637744,73634484,73633900,73631654	73641757,73640035,73637922,73634733,73634065,73632161	Gene ID= ENSG00000177791.11 TPM= 755.84 Transcript Type= protein_coding
chr10	73645521	73648557	73645521	73648557	-	transcript2283.chr10.nnic@NA	transcript2283.chr10.nnic	NA	73645521	73648557	Gene ID= novel_gene_chr10_2284 TPM= 112.94 Transcript Type= NA
chr10	73730608	73733995	73730608	73733995	+	transcript2311.chr10.nnic@NA	transcript2311.chr10.nnic	NA	73730608	73733995	Gene ID= novel_gene_chr10_2312 TPM= 4.83 Transcript Type= NA
chr10	73733819	73736591	73733819	73736591	+	transcript2313.chr10.nnic@NA	transcript2313.chr10.nnic	NA	73733819	73736591	Gene ID= novel_gene_chr10_2314 TPM= 3.86 Transcript Type= NA
chr10	73742995	73744230	73742995	73744230	-	ENST00000625041.1@AC022400.7	ENST00000625041.1	TEC	73742995	73744230	Gene ID= ENSG00000279088.1 TPM= 3.86 Transcript Type= TEC
chr10	73744352	73772161	73744352	73772161	+	transcript2292.chr10.nic@SEC24C	transcript2292.chr10.nic	protein_coding	73744352,73746805,73751108,73759622,73760018,73760713,73762098,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770709,73770955	73744437,73747004,73751243,73759794,73760386,73760849,73762166,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770471,73770798,73772161	Gene ID= ENSG00000176986.15 TPM= 45.13 Transcript Type= NA
chr10	73744384	73772161	73744384	73772161	+	ENST00000345254.8@SEC24C	ENST00000345254.8	protein_coding	73744384,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770709,73770955	73744437,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770471,73770798,73772161	Gene ID= ENSG00000176986.15 TPM= 56.23 Transcript Type= protein_coding
chr10	73744391	73772161	73744391	73772161	+	ENST00000339365.2@SEC24C	ENST00000339365.2	protein_coding	73744391,73746630,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770709,73770955	73744437,73746716,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770471,73770798,73772161	Gene ID= ENSG00000176986.15 TPM= 56.23 Transcript Type= protein_coding
chr10	73744384	73772159	73744384	73772159	+	ENST00000465076.5@SEC24C	ENST00000465076.5	protein_coding	73744384,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770955	73744437,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770798,73772159	Gene ID= ENSG00000176986.15 TPM= 8.45 Transcript Type= nonsense_mediated_decay
chr10	73772284	73779274	73772284	73779274	+	transcript2309.chr10.nic@FUT11	transcript2309.chr10.nic	protein_coding	73772284,73773190,73778828	73773041,73773815,73779274	Gene ID= ENSG00000196968.10 TPM= 1.93 Transcript Type= NA
chr10	73782063	73783652	73782063	73783652	+	ENST00000372833.5@CHCHD1	ENST00000372833.5	protein_coding	73782063,73782323,73783074	73782199,73782441,73783652	Gene ID= ENSG00000172586.7 TPM= 3.86 Transcript Type= protein_coding
chr10	73801911	73811584	73801911	73811584	-	ENST00000309979.10@NDST2	ENST00000309979.10	protein_coding	73811474,73810799,73807384,73807108,73806657,73806289,73805900,73805587,73804773,73803893,73803574,73803189,73802972,73802674,73801911	73811584,73810903,73808729,73807195,73806811,73806474,73806028,73805769,73804869,73804016,73803748,73803359,73803081,73802776,73802576	Gene ID= ENSG00000166507.17 TPM= 6.76 Transcript Type= protein_coding
chr10	73810684	73811798	73810684	73811798	-	ENST00000398701.2@NDST2	ENST00000398701.2	protein_coding	73811474,73810684	73811798,73810903	Gene ID= ENSG00000166507.17 TPM= 2.9 Transcript Type= processed_transcript
chr10	73814288	73874574	73814288	73874574	-	transcript2327.chr10.nic@CAMK2G	transcript2327.chr10.nic	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73825321,73824040,73821682,73819532,73818209,73817479,73817023,73815003,73814288	73874574,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73825347,73824084,73821730,73819645,73818895,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 2.58 Transcript Type= NA
chr10	73814288	73874574	73814288	73874574	-	transcript2328.chr10.nic@CAMK2G	transcript2328.chr10.nic	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73839539,73837468,73825279,73824040,73821682,73819532,73817479,73817023,73815003,73814288	73874574,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73839601,73837511,73825347,73824084,73821730,73819645,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 2.58 Transcript Type= NA
chr10	73812501	73874591	73812501	73874591	-	ENST00000394762.6@CAMK2G	ENST00000394762.6	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73839539,73837468,73825279,73824040,73821682,73817479,73817023,73815003,73812501	73874591,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73839601,73837511,73825347,73824084,73821730,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 23.33 Transcript Type= protein_coding
chr10	73812501	73874580	73812501	73874580	-	ENST00000322635.7@CAMK2G	ENST00000322635.7	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73839539,73837468,73828089,73824040,73821682,73817479,73817023,73815003,73812501	73874580,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73839601,73837511,73828121,73824084,73821730,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 6.92 Transcript Type= protein_coding
chr10	73814288	73874574	73814288	73874574	-	transcript2338.chr10.nic@CAMK2G	transcript2338.chr10.nic	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73825279,73824040,73821682,73817479,73817023,73815003,73814288	73874574,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73825347,73824084,73821730,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 14.16 Transcript Type= NA
chr10	73814288	73874574	73814288	73874574	-	transcript2340.chr10.nic@CAMK2G	transcript2340.chr10.nic	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73828089,73824040,73821682,73817479,73817023,73815003,73814288	73874574,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73828121,73824084,73821730,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 8.37 Transcript Type= NA
chr10	73814288	73874502	73814288	73874502	-	ENST00000372765.5@CAMK2G	ENST00000372765.5	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73839539,73837468,73824040,73821682,73817479,73817023,73815003,73814288	73874502,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73839601,73837511,73824084,73821730,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 5.79 Transcript Type= protein_coding
chr10	73911157	73917497	73911157	73917497	+	ENST00000372764.3@PLAU	ENST00000372764.3	protein_coding	73911157,73911525,73912041,73912215,73912924,73913290,73913539,73913980,73914776,73915251,73916389	73911218,73911612,73912068,73912322,73913098,73913381,73913758,73914128,73914916,73915399,73917497	Gene ID= ENSG00000122861.15 TPM= 5.79 Transcript Type= protein_coding
chr10	74118260	74119851	74118260	74119851	+	transcript2386.chr10.nnic@NA	transcript2386.chr10.nnic	NA	74118260	74119851	Gene ID= novel_gene_chr10_2387 TPM= 8.69 Transcript Type= NA
chr10	74120255	74151063	74120255	74151063	-	ENST00000355264.8@AP3M1	ENST00000355264.8	protein_coding	74150755,74138107,74136632,74134027,74129907,74129108,74126148,74124380,74120255	74151063,74138382,74136803,74134164,74129992,74129241,74126355,74124524,74123910	Gene ID= ENSG00000185009.12 TPM= 3.86 Transcript Type= protein_coding
chr10	74122964	74150842	74122964	74150842	-	ENST00000372745.1@AP3M1	ENST00000372745.1	protein_coding	74150755,74138806,74138107,74136632,74134027,74129907,74129108,74126148,74124380,74122964	74150842,74138931,74138382,74136803,74134164,74129992,74129241,74126355,74124524,74123910	Gene ID= ENSG00000185009.12 TPM= 4.83 Transcript Type= protein_coding
chr10	74826600	75032292	74826600	75032292	+	ENST00000372724.5@KAT6B	ENST00000372724.5	protein_coding	74826600,74838683,74842600,74959970,74969660,74970020,74972507,74975399,74977316,74979224,74981787,74985080,74989019,75020582,75021126,75021881,75024958,75028489	74826785,74838752,74843478,74960078,74969775,74970101,74972639,74975454,74977437,74979339,74981928,74985241,74989112,75020813,75021285,75022231,75025249,75032292	Gene ID= ENSG00000156650.12 TPM= 3.86 Transcript Type= protein_coding
chr10	75037472	75073655	75037472	75073655	-	transcript2415.chr10.nnic@DUPD1	transcript2415.chr10.nnic	protein_coding	75073569,75073102,75058315,75043797,75037472	75073655,75073233,75058548,75044017,75038077	Gene ID= ENSG00000188716.5 TPM= 4.34 Transcript Type= NA
chr10	75037472	75073651	75037472	75073651	-	transcript2416.chr10.nnic@DUPD1	transcript2416.chr10.nnic	protein_coding	75073569,75058315,75043797,75037472	75073651,75058548,75044017,75038077	Gene ID= ENSG00000188716.5 TPM= 37.16 Transcript Type= NA
chr10	75037472	75073651	75037472	75073651	-	transcript2417.chr10.nnic@DUPD1	transcript2417.chr10.nnic	protein_coding	75073569,75058315,75037472	75073651,75058548,75038077	Gene ID= ENSG00000188716.5 TPM= 1.93 Transcript Type= NA
chr10	75072534	75073655	75072534	75073655	-	transcript2419.chr10.nnic@NA	transcript2419.chr10.nnic	NA	75073569,75073102,75072534	75073655,75073233,75072846	Gene ID= novel_gene_chr10_2420 TPM= 1.93 Transcript Type= NA
chr10	75094434	75109221	75094434	75109221	-	ENST00000372702.7@DUSP13	ENST00000372702.7	protein_coding	75109009,75107992,75105661,75103894,75101867,75097712,75095575,75094434	75109221,75108209,75105868,75104097,75101961,75097885,75095795,75094878	Gene ID= ENSG00000079393.20 TPM= 120.1 Transcript Type= protein_coding
chr10	75094436	75109219	75094436	75109219	-	transcript2422.chr10.nic@DUSP13	transcript2422.chr10.nic	protein_coding	75109009,75107992,75105661,75103894,75101867,75097712,75095575,75094436	75109219,75108283,75105868,75104097,75101961,75097885,75095795,75094878	Gene ID= ENSG00000079393.20 TPM= 46.01 Transcript Type= NA
chr10	75094436	75109213	75094436	75109213	-	transcript2426.chr10.nic@DUSP13	transcript2426.chr10.nic	protein_coding	75109009,75105661,75103894,75101867,75097712,75095575,75094436	75109213,75105868,75104097,75101961,75097885,75095795,75094878	Gene ID= ENSG00000079393.20 TPM= 59.04 Transcript Type= NA
chr10	75094436	75109219	75094436	75109219	-	transcript2436.chr10.nnic@DUSP13	transcript2436.chr10.nnic	protein_coding	75109009,75107992,75101867,75097712,75095575,75094436	75109219,75108209,75101961,75097885,75095795,75094878	Gene ID= ENSG00000079393.20 TPM= 34.91 Transcript Type= NA
chr10	75094439	75109212	75094439	75109212	-	ENST00000479884.6@DUSP13	ENST00000479884.6	protein_coding	75109009,75107992,75103894,75101867,75097712,75095575,75094439	75109212,75108209,75104097,75101961,75097885,75095795,75094878	Gene ID= ENSG00000079393.20 TPM= 45.75 Transcript Type= nonsense_mediated_decay
chr10	75111635	75182123	75111635	75182123	+	ENST00000542569.5@SAMD8	ENST00000542569.5	protein_coding	75111635,75150514,75164645,75168541,75176066,75176388	75111722,75151106,75164740,75168658,75176216,75182123	Gene ID= ENSG00000156671.12 TPM= 19.31 Transcript Type= protein_coding
chr10	75210751	75231448	75210751	75231448	+	ENST00000332211.10@VDAC2	ENST00000332211.10	protein_coding	75210751,75211134,75212230,75214021,75219063,75219304,75220743,75222252,75229644,75230898	75210938,75211189,75212298,75214070,75219215,75219356,75220970,75222402,75229701,75231448	Gene ID= ENSG00000165637.13 TPM= 205.78 Transcript Type= protein_coding
chr10	75233971	75235947	75233971	75235947	-	transcript2485.chr10.nic@COMTD1	transcript2485.chr10.nic	protein_coding	75235835,75235616,75235267,75234938,75234610,75233971	75235947,75235743,75235372,75235178,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 1.93 Transcript Type= NA
chr10	75233971	75235943	75233971	75235943	-	transcript2487.chr10.nnic@COMTD1	transcript2487.chr10.nnic	protein_coding	75235835,75235060,75234938,75234610,75233971	75235943,75235178,75234992,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 2.9 Transcript Type= NA
chr10	75233969	75236011	75233969	75236011	-	ENST00000372538.7@COMTD1	ENST00000372538.7	protein_coding	75235835,75235616,75235267,75235060,75234938,75234610,75233969	75236011,75235743,75235372,75235178,75234992,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 20.27 Transcript Type= protein_coding
chr10	76444659	76557372	76444659	76557372	+	transcript2499.chr10.nnic@LRMDA	transcript2499.chr10.nnic	protein_coding	76444659,76557209	76444716,76557372	Gene ID= ENSG00000148655.14 TPM= 1.93 Transcript Type= NA
chr10	77012199	77638450	77012199	77638450	-	transcript2506.chr10.nic@KCNMA1	transcript2506.chr10.nic	protein_coding	77637265,77493798,77403862,77251195,77184823,77183421,77120973,77112367,77110173,77108481,77090400,77086488,77084637,77079481,77073097,77039528,77027823,77019013,77012199	77638450,77493929,77404023,77251256,77184916,77183532,77121048,77112442,77110343,77108572,77090510,77086593,77084719,77079550,77073252,77039637,77027891,77019099,77012557	Gene ID= ENSG00000156113.22 TPM= 20.27 Transcript Type= NA
chr10	77636199	77638511	77636199	77638511	-	transcript2508.chr10.nnic@KCNMA1	transcript2508.chr10.nnic	protein_coding	77637265,77636894,77636199	77638511,77637006,77636569	Gene ID= ENSG00000156113.22 TPM= 2.9 Transcript Type= NA
chr10	77636199	77637789	77636199	77637789	-	ENST00000481070.1@KCNMA1	ENST00000481070.1	protein_coding	77637265,77636199	77637789,77636569	Gene ID= ENSG00000156113.22 TPM= 6.76 Transcript Type= protein_coding
chr10	77816033	77926822	77816033	77926822	-	transcript2515.chr10.nic@DLG5	transcript2515.chr10.nic	protein_coding	77926217,77869129,77856730,77854227,77853354,77843447,77841881,77835738,77833914,77830741,77830217,77829355,77828882,77824384,77821082,77819895,77819321,77817777,77817007,77816551,77816033	77926822,77869197,77856892,77854370,77853537,77843706,77842193,77835922,77834039,77830873,77830344,77829530,77828985,77824476,77822101,77820018,77819465,77817889,77817096,77816701,77816175	Gene ID= ENSG00000151208.16 TPM= 7.24 Transcript Type= NA
chr10	77790791	77926526	77790791	77926526	-	ENST00000372391.6@DLG5	ENST00000372391.6	protein_coding	77926217,77869129,77856730,77854227,77853354,77843447,77841881,77835738,77833914,77830741,77830217,77829355,77828882,77824384,77821082,77819895,77819321,77817777,77817007,77816551,77812215,77811924,77811094,77809547,77807796,77806758,77805665,77796451,77796061,77794849,77794008,77790791	77926526,77869197,77856892,77854370,77853537,77843706,77842193,77835922,77834039,77830873,77830344,77829530,77828985,77824476,77822101,77820018,77819465,77817889,77817096,77816701,77812377,77812057,77811234,77809730,77807944,77806928,77805861,77796594,77796188,77794958,77794117,77792543	Gene ID= ENSG00000151208.16 TPM= 54.54 Transcript Type= protein_coding
chr10	77927631	77929824	77927631	77929824	+	ENST00000632919.1@DLG5-AS1	ENST00000632919.1	processed_transcript	77927631	77929824	Gene ID= ENSG00000233871.2 TPM= 1.93 Transcript Type= retained_intron
chr10	77975149	78029545	77975149	78029545	-	ENST00000372371.7@POLR3A	ENST00000372371.7	protein_coding	78029364,78026094,78025622,78024971,78024549,78022145,78021860,78021546,78019162,78017575,78013650,78010471,78009864,78009537,78007702,78004716,78002197,78000976,77999981,77993197,77991054,77986073,77985903,77985170,77984205,77983920,77982653,77982154,77981428,77980141,77975149	78029545,78026229,78025759,78025142,78024703,78022384,78022022,78021682,78019265,78017716,78013790,78010540,78009991,78009675,78007866,78004888,78002308,78001094,78000118,77993367,77991167,77986159,77985985,77985340,77984298,77984012,77982817,77982318,77981559,77980273,77977626	Gene ID= ENSG00000148606.12 TPM= 4.83 Transcript Type= protein_coding
chr10	78033844	78040670	78033844	78040670	+	ENST00000485708.6@RPS24	ENST00000485708.6	protein_coding	78033844,78035352,78035511,78037194,78037965,78040204,78040615	78033904,78035417,78035720,78037304,78037982,78040225,78040670	Gene ID= ENSG00000138326.18 TPM= 384.19 Transcript Type= processed_transcript
chr10	78033865	78040697	78033865	78040697	+	ENST00000372360.7@RPS24	ENST00000372360.7	protein_coding	78033865,78035352,78035511,78037194,78040615	78033904,78035417,78035720,78037304,78040697	Gene ID= ENSG00000138326.18 TPM= 11.58 Transcript Type= protein_coding
chr10	78033883	78040697	78033883	78040697	+	ENST00000360830.8@RPS24	ENST00000360830.8	protein_coding	78033883,78035352,78035511,78037194,78040204,78040615	78033904,78035417,78035720,78037304,78040225,78040697	Gene ID= ENSG00000138326.18 TPM= 15.44 Transcript Type= protein_coding
chr10	79069035	79316519	79069035	79316519	+	ENST00000334512.9@ZMIZ1	ENST00000334512.9	protein_coding	79069035,79118915,79139682,79162053,79201584,79208336,79216169,79277181,79289775,79290959,79292158,79293381,79296471,79297613,79298406,79299050,79300732,79302107,79304015,79305164,79305533,79306100,79307405,79310924,79312642	79069270,79119024,79139777,79162133,79201692,79208449,79216274,79277325,79289889,79291176,79292356,79293653,79296653,79297690,79298580,79299191,79300942,79302212,79304175,79305231,79305601,79306344,79307571,79311184,79316519	Gene ID= ENSG00000108175.16 TPM= 29.92 Transcript Type= protein_coding
chr10	79068984	79217433	79068984	79217433	+	transcript2529.chr10.nic@ZMIZ1	transcript2529.chr10.nic	protein_coding	79068984,79118915,79139682,79162053,79201584,79208336,79216169	79069270,79119024,79139777,79162133,79201692,79208449,79217433	Gene ID= ENSG00000108175.16 TPM= 3.86 Transcript Type= NA
chr10	79068984	79164042	79068984	79164042	+	transcript2532.chr10.nic@ZMIZ1	transcript2532.chr10.nic	protein_coding	79068984,79118915,79139682,79162053	79069270,79119024,79139777,79164042	Gene ID= ENSG00000108175.16 TPM= 2.9 Transcript Type= NA
chr10	79347478	79355337	79347478	79355337	+	ENST00000225174.7@PPIF	ENST00000225174.7	protein_coding	79347478,79349076,79349665,79351487,79352317,79353707	79347743,79349106,79349753,79351583,79352392,79355337	Gene ID= ENSG00000108179.13 TPM= 52.13 Transcript Type= protein_coding
chr10	79382325	79445627	79382325	79445627	-	ENST00000372336.3@ZCCHC24	ENST00000372336.3	protein_coding	79445195,79432558,79394276,79382325	79445627,79432758,79394440,79386458	Gene ID= ENSG00000165424.6 TPM= 55.99 Transcript Type= protein_coding
chr10	79680683	79826415	79680683	79826415	-	transcript2555.chr10.nnic@NUTM2B-AS1	transcript2555.chr10.nnic	antisense_RNA	79826198,79814613,79808759,79806039,79804485,79766273,79686282,79680683	79826415,79814716,79808832,79806122,79804527,79766324,79686463,79685383	Gene ID= ENSG00000225484.6 TPM= 3.86 Transcript Type= NA
chr10	79691502	79826516	79691502	79826516	-	ENST00000601369.5@NUTM2B-AS1	ENST00000601369.5	antisense_RNA	79826198,79814613,79808759,79806039,79804485,79766271,79691502	79826516,79814716,79808832,79806122,79804527,79766324,79692056	Gene ID= ENSG00000225484.6 TPM= 5.31 Transcript Type= antisense_RNA
chr10	79825902	79827602	79825902	79827602	+	ENST00000605920.1@AL135925.1	ENST00000605920.1	lincRNA	79825902	79827602	Gene ID= ENSG00000272447.1 TPM= 31.37 Transcript Type= lincRNA
chr10	80078670	80092557	80078670	80092557	+	ENST00000372281.7@TMEM254	ENST00000372281.7	protein_coding	80078670,80081841,80082145,80090797	80078786,80081944,80082204,80092557	Gene ID= ENSG00000133678.13 TPM= 1.93 Transcript Type= protein_coding
chr10	80132721	80145359	80132721	80145359	+	ENST00000372263.3@PLAC9	ENST00000372263.3	protein_coding	80132721,80142082,80144223,80144900	80132826,80142179,80144343,80145359	Gene ID= ENSG00000189129.13 TPM= 1.93 Transcript Type= protein_coding
chr10	80155597	80201657	80155597	80201657	-	transcript2587.chr10.nnic@ANXA11	transcript2587.chr10.nnic	protein_coding	80201210,80176107,80172807,80170800,80168969,80167226,80166890,80166084,80164053,80163534,80163349,80161935,80159100,80157967,80157641,80155597	80201657,80176155,80172869,80170915,80169358,80167313,80166984,80166197,80164143,80163613,80163405,80162028,80159195,80158025,80157763,80155912	Gene ID= ENSG00000122359.17 TPM= 13.42 Transcript Type= NA
chr10	80155597	80201678	80155597	80201678	-	transcript2588.chr10.nnic@ANXA11	transcript2588.chr10.nnic	protein_coding	80201259,80176107,80172807,80170800,80168969,80167226,80166890,80166084,80164053,80163534,80163349,80161935,80159100,80157967,80157641,80155597	80201678,80176155,80172869,80170915,80169358,80167313,80166984,80166197,80164143,80163613,80163405,80162028,80159195,80158025,80157763,80155912	Gene ID= ENSG00000122359.17 TPM= 46.24 Transcript Type= NA
chr10	80155597	80201672	80155597	80201672	-	transcript2595.chr10.nnic@ANXA11	transcript2595.chr10.nnic	protein_coding	80201259,80172807,80170800,80168969,80167226,80166890,80166084,80164053,80163534,80163349,80161935,80159100,80157967,80157641,80155597	80201672,80172869,80170915,80169358,80167313,80166984,80166197,80164143,80163613,80163405,80162028,80159195,80158025,80157763,80155912	Gene ID= ENSG00000122359.17 TPM= 36.59 Transcript Type= NA
chr10	80155124	80205572	80155124	80205572	-	ENST00000422982.7@ANXA11	ENST00000422982.7	protein_coding	80205343,80176107,80172807,80170800,80168969,80167226,80166890,80166084,80164053,80163534,80163349,80161935,80159100,80157967,80157641,80155124	80205572,80176155,80172869,80170915,80169358,80167313,80166984,80166197,80164143,80163613,80163405,80162028,80159195,80158025,80157763,80155912	Gene ID= ENSG00000122359.17 TPM= 15.59 Transcript Type= protein_coding
chr10	80152606	80155841	80152606	80155841	-	transcript2611.chr10.nnic@NA	transcript2611.chr10.nnic	NA	80152606	80155841	Gene ID= novel_gene_chr10_2612 TPM= 3.86 Transcript Type= NA
chr10	80408493	80437115	80408493	80437115	+	ENST00000606162.5@FAM213A	ENST00000606162.5	protein_coding	80408493,80420466,80422417,80425866,80427332,80431986	80408643,80420645,80422508,80426006,80427496,80437115	Gene ID= ENSG00000122378.13 TPM= 24.13 Transcript Type= protein_coding
chr10	80408494	80432997	80408494	80432997	+	ENST00000372185.5@FAM213A	ENST00000372185.5	protein_coding	80408494,80420483,80422417,80425866,80427332,80431986	80408643,80420645,80422508,80426006,80427496,80432997	Gene ID= ENSG00000122378.13 TPM= 16.41 Transcript Type= protein_coding
chr10	80454310	80519628	80454310	80519628	+	transcript2626.chr10.nnic@TSPAN14	transcript2626.chr10.nnic	protein_coding	80454310,80468547,80489217,80504728,80507228,80509301,80512144,80514019,80516204,80517905	80454371,80468687,80489314,80504778,80507374,80509471,80512269,80514063,80516323,80519628	Gene ID= ENSG00000108219.14 TPM= 11.58 Transcript Type= NA
chr10	80454166	80533123	80454166	80533123	+	ENST00000429989.7@TSPAN14	ENST00000429989.7	protein_coding	80454166,80489217,80504728,80507228,80509301,80512144,80514019,80516204,80517905	80454371,80489314,80504778,80507374,80509471,80512269,80514063,80516323,80533123	Gene ID= ENSG00000108219.14 TPM= 6.76 Transcript Type= protein_coding
chr10	84139440	84153245	84139440	84153245	+	ENST00000372134.5@GHITM	ENST00000372134.5	protein_coding	84139440,84141462,84142655,84143995,84144875,84148730,84150055,84150709,84152264	84139593,84141629,84142754,84144106,84145016,84148838,84150243,84150880,84153245	Gene ID= ENSG00000165678.20 TPM= 14.48 Transcript Type= protein_coding
chr10	84328545	84470425	84328545	84470425	+	transcript2647.chr10.nic@CCSER2	transcript2647.chr10.nic	protein_coding	84328545,84371014,84373619,84417771,84425731,84438512,84463933,84470372	84328808,84372469,84373815,84417861,84425893,84438707,84464016,84470425	Gene ID= ENSG00000107771.15 TPM= 27.51 Transcript Type= NA
chr10	84424888	84470425	84424888	84470425	+	transcript2654.chr10.nic@CCSER2	transcript2654.chr10.nic	protein_coding	84424888,84425731,84438512,84463933,84470372	84425048,84425893,84438707,84464016,84470425	Gene ID= ENSG00000107771.15 TPM= 19.79 Transcript Type= NA
chr10	84424939	84518521	84424939	84518521	+	ENST00000543283.2@CCSER2	ENST00000543283.2	protein_coding	84424939,84425731,84438512,84463933,84470372,84477575,84499875,84513449	84425048,84425893,84438707,84464016,84470458,84477664,84499959,84518521	Gene ID= ENSG00000107771.15 TPM= 15.44 Transcript Type= protein_coding
chr10	86437010	86521764	86437010	86521764	-	transcript2663.chr10.nnic@WAPL	transcript2663.chr10.nnic	protein_coding	86521365,86517571,86499718,86497201,86473878,86472612,86472208,86470992,86467279,86461176,86460399,86458989,86453656,86453220,86451967,86446242,86443275,86437920,86437010	86521764,86518091,86500743,86497301,86473973,86472764,86472344,86471103,86467506,86461287,86460496,86459065,86453831,86453335,86452131,86446449,86443363,86438015,86437608	Gene ID= ENSG00000062650.18 TPM= 4.03 Transcript Type= NA
chr10	86467360	86521823	86467360	86521823	-	transcript2671.chr10.nic@WAPL	transcript2671.chr10.nic	protein_coding	86521365,86517571,86499718,86497201,86473878,86472612,86472208,86470992,86467360	86521823,86518091,86500743,86497319,86473973,86472764,86472344,86471103,86467506	Gene ID= ENSG00000062650.18 TPM= 8.85 Transcript Type= NA
chr10	86435256	86521815	86435256	86521815	-	ENST00000298767.9@WAPL	ENST00000298767.9	protein_coding	86521365,86517571,86499718,86497201,86473878,86472612,86472208,86470992,86467279,86461176,86460399,86458989,86453656,86453220,86451967,86446242,86443275,86437920,86435256	86521815,86518091,86500743,86497319,86473973,86472764,86472344,86471103,86467506,86461287,86460496,86459065,86453831,86453335,86452131,86446449,86443363,86438015,86437608	Gene ID= ENSG00000062650.18 TPM= 18.51 Transcript Type= protein_coding
chr10	86521948	86522684	86521948	86522684	+	transcript2677.chr10.nnic@NA	transcript2677.chr10.nnic	NA	86521948	86522684	Gene ID= novel_gene_chr10_2678 TPM= 4.83 Transcript Type= NA
chr10	86668410	86735279	86668410	86735279	+	transcript2680.chr10.nic@LDB3	transcript2680.chr10.nic	protein_coding	86668410,86668669,86679367,86680082,86685678,86687069,86691896,86692535,86709905,86716327,86717964,86718727,86726137,86732887	86668570,86668784,86679518,86680157,86685700,86687272,86692065,86692571,86710050,86716771,86718144,86718847,86726252,86735279	Gene ID= ENSG00000122367.19 TPM= 104.81 Transcript Type= NA
chr10	86668410	86700045	86668410	86700045	+	transcript2686.chr10.nnic@LDB3	transcript2686.chr10.nnic	protein_coding	86668410,86668669,86679367,86680082,86685678,86687069,86689260,86691896,86692535,86699278	86668570,86668784,86679518,86680157,86685700,86687272,86689274,86692065,86692571,86700045	Gene ID= ENSG00000122367.19 TPM= 76.58 Transcript Type= NA
chr10	86668613	86700041	86668613	86700041	+	ENST00000372066.7@LDB3	ENST00000372066.7	protein_coding	86668613,86679367,86680082,86685678,86687069,86691896,86692535,86699278	86668784,86679518,86680157,86685700,86687272,86692065,86692571,86700041	Gene ID= ENSG00000122367.19 TPM= 80.92 Transcript Type= protein_coding
chr10	86668692	86734995	86668692	86734995	+	ENST00000263066.10@LDB3	ENST00000263066.10	protein_coding	86668692,86679367,86680082,86685678,86687069,86691896,86692535,86709905,86716327,86717964,86718727,86726137,86732887	86668784,86679518,86680157,86685700,86687272,86692065,86692571,86710050,86716771,86718144,86718847,86726252,86734995	Gene ID= ENSG00000122367.19 TPM= 13.44 Transcript Type= protein_coding
chr10	86676502	86680704	86676502	86680704	-	transcript2712.chr10.nnic@NA	transcript2712.chr10.nnic	NA	86676502	86680704	Gene ID= novel_gene_chr10_2713 TPM= 1.93 Transcript Type= NA
chr10	86709070	86711922	86709070	86711922	-	transcript2710.chr10.nnic@NA	transcript2710.chr10.nnic	NA	86709070	86711922	Gene ID= novel_gene_chr10_2711 TPM= 7.72 Transcript Type= NA
chr10	86737311	86739812	86737311	86739812	+	transcript2704.chr10.nnic@NA	transcript2704.chr10.nnic	NA	86737311	86739812	Gene ID= novel_gene_chr10_2705 TPM= 5.79 Transcript Type= NA
chr10	86755262	86756409	86755262	86756409	-	transcript2722.chr10.nnic@NA	transcript2722.chr10.nnic	NA	86755262	86756409	Gene ID= novel_gene_chr10_2723 TPM= 3.86 Transcript Type= NA
chr10	86755764	86925181	86755764	86925181	+	transcript2715.chr10.nnic@BMPR1A	transcript2715.chr10.nnic	protein_coding	86755764,86838865,86875867,86890062,86892127,86899794,86900027,86912240,86917134,86919172,86921520,86923376,86923594	86756104,86838979,86876085,86890224,86892229,86899890,86900126,86912384,86917326,86919469,86921695,86923506,86925181	Gene ID= ENSG00000107779.13 TPM= 7.72 Transcript Type= NA
chr10	86935540	86957863	86935540	86957863	-	ENST00000372027.9@MMRN2	ENST00000372027.9	protein_coding	86957378,86945561,86945370,86945188,86944262,86942317,86935540	86957863,86945689,86945476,86945268,86944435,86944128,86937125	Gene ID= ENSG00000173269.13 TPM= 27.03 Transcript Type= protein_coding
chr10	86959375	86963258	86959375	86963258	+	ENST00000483064.1@SNCG	ENST00000483064.1	protein_coding	86959375,86960001,86962604,86962965	86959674,86960128,86962675,86963258	Gene ID= ENSG00000173267.13 TPM= 2.9 Transcript Type= processed_transcript
chr10	86965288	86971229	86965288	86971229	-	transcript2738.chr10.nic@ADIRF-AS1	transcript2738.chr10.nic	processed_transcript	86969042,86965288	86971229,86966237	Gene ID= ENSG00000272734.1 TPM= 4.83 Transcript Type= NA
chr10	86965740	86971229	86965740	86971229	-	transcript2739.chr10.nic@ADIRF-AS1	transcript2739.chr10.nic	processed_transcript	86969042,86965740	86971229,86966237	Gene ID= ENSG00000272734.1 TPM= 7.72 Transcript Type= NA
chr10	86965326	86969492	86965326	86969492	-	transcript2740.chr10.nnic@NA	transcript2740.chr10.nnic	NA	86965326	86969492	Gene ID= novel_gene_chr10_2741 TPM= 7.72 Transcript Type= NA
chr10	86968192	86970915	86968192	86970915	+	ENST00000372013.7@ADIRF	ENST00000372013.7	protein_coding	86968192,86970200,86970476	86968605,86970262,86970915	Gene ID= ENSG00000148671.13 TPM= 42.47 Transcript Type= protein_coding
chr10	87050486	87094866	87050486	87094866	-	ENST00000277865.4@GLUD1	ENST00000277865.4	protein_coding	87094325,87076576,87075968,87074551,87068063,87062656,87060915,87060688,87060161,87059150,87057691,87053342,87050486	87094866,87076656,87076023,87074614,87068157,87062835,87061052,87060825,87060241,87059273,87057782,87053404,87051870	Gene ID= ENSG00000148672.8 TPM= 73.36 Transcript Type= protein_coding
chr10	87095196	87191468	87095196	87191468	+	ENST00000298786.4@FAM35A	ENST00000298786.4	protein_coding	87095196,87096934,87151350,87158048,87170478,87170840,87175889,87180075,87187085,87190484	87095248,87096989,87152879,87158155,87170672,87170974,87176095,87180303,87187200,87191468	Gene ID= ENSG00000122376.11 TPM= 9.65 Transcript Type= protein_coding
chr10	87095196	87191463	87095196	87191463	+	ENST00000298784.5@FAM35A	ENST00000298784.5	protein_coding	87095196,87096934,87151350,87158048,87170478,87170840,87180075,87187085,87190484	87095248,87096989,87152879,87158155,87170672,87170974,87180303,87187200,87191463	Gene ID= ENSG00000122376.11 TPM= 8.69 Transcript Type= protein_coding
chr10	87244132	87342612	87244132	87342612	-	ENST00000446751.5@NUTM2A-AS1	ENST00000446751.5	antisense_RNA	87342242,87336786,87326630,87288442,87246115,87244132	87342612,87336889,87326672,87288495,87246212,87245855	Gene ID= ENSG00000223482.7 TPM= 3.86 Transcript Type= antisense_RNA
chr10	87204694	87342533	87204694	87342533	-	transcript2783.chr10.nnic@NUTM2A-AS1	transcript2783.chr10.nnic	antisense_RNA	87342242,87336786,87326630,87288442,87204694	87342533,87336889,87326672,87288495,87206643	Gene ID= ENSG00000223482.7 TPM= 2.9 Transcript Type= NA
chr10	87504875	87553388	87504875	87553388	+	ENST00000371996.8@MINPP1	ENST00000371996.8	protein_coding	87504875,87508336,87513124,87521036,87552082	87505552,87508533,87513221,87521169,87553388	Gene ID= ENSG00000107789.15 TPM= 8.69 Transcript Type= protein_coding
chr10	87659613	87747705	87659613	87747705	+	ENST00000361175.8@PAPSS2	ENST00000361175.8	protein_coding	87659613,87709196,87713075,87714044,87714745,87714985,87715732,87727284,87741235,87743373,87745002,87745832	87660008,87709313,87713310,87714182,87714863,87715098,87715843,87727489,87741370,87743641,87745231,87747705	Gene ID= ENSG00000198682.12 TPM= 6.76 Transcript Type= protein_coding
chr10	87751851	87818253	87751851	87818253	-	transcript2805.chr10.nnic@ATAD1	transcript2805.chr10.nnic	protein_coding	87818167,87814438,87792657,87790310,87784470,87776321,87770952,87767673,87756789,87751851	87818253,87814612,87792755,87790430,87784670,87776427,87771041,87767723,87756922,87754807	Gene ID= ENSG00000138138.13 TPM= 6.76 Transcript Type= NA
chr10	87863113	87971930	87863113	87971930	+	ENST00000371953.7@PTEN	ENST00000371953.7	protein_coding	87863113,87894025,87925513,87931046,87933013,87952118,87957853,87960894,87965287	87864548,87894109,87925557,87931089,87933251,87952259,87958019,87961118,87971930	Gene ID= ENSG00000171862.10 TPM= 26.06 Transcript Type= protein_coding
chr10	87863629	87961309	87863629	87961309	+	transcript2828.chr10.nic@PTEN	transcript2828.chr10.nic	protein_coding	87863629,87894025,87925513,87931046,87933013,87952118,87957853,87960894	87864548,87894109,87925557,87931089,87933251,87952259,87958019,87961309	Gene ID= ENSG00000171862.10 TPM= 4.83 Transcript Type= NA
chr10	87863586	87867032	87863586	87867032	+	transcript2831.chr10.nnic@NA	transcript2831.chr10.nnic	NA	87863586	87867032	Gene ID= novel_gene_chr10_2832 TPM= 10.62 Transcript Type= NA
chr10	88284959	88583213	88284959	88583213	-	ENST00000331772.8@RNLS	ENST00000331772.8	protein_coding	88583073,88582202,88581567,88572903,88362552,88314466,88284959	88583213,88582307,88581709,88573061,88362725,88314641,88285506	Gene ID= ENSG00000184719.11 TPM= 2.9 Transcript Type= protein_coding
chr10	88582935	88584528	88582935	88584528	+	transcript2840.chr10.nnic@NA	transcript2840.chr10.nnic	NA	88582935	88584528	Gene ID= novel_gene_chr10_2841 TPM= 3.86 Transcript Type= NA
chr10	88935074	88952773	88935074	88952773	-	ENST00000224784.10@ACTA2	ENST00000224784.10	protein_coding	88952731,88948802,88947258,88943797,88941785,88941229,88939507,88938061,88935074	88952773,88948953,88947386,88943907,88941869,88941390,88939698,88938242,88935366	Gene ID= ENSG00000107796.13 TPM= 36.68 Transcript Type= protein_coding
chr10	88935074	88991333	88935074	88991333	-	transcript2850.chr10.nic@ACTA2	transcript2850.chr10.nic	protein_coding	88991022,88948802,88947258,88943797,88941785,88941229,88939507,88938061,88935074	88991333,88948953,88947386,88943907,88941869,88941390,88939698,88938242,88935366	Gene ID= ENSG00000107796.13 TPM= 3.86 Transcript Type= NA
chr10	88990049	88991332	88990049	88991332	-	transcript2852.chr10.nnic@NA	transcript2852.chr10.nnic	NA	88990049	88991332	Gene ID= novel_gene_chr10_2853 TPM= 1.93 Transcript Type= NA
chr10	88990657	89015785	88990657	89015785	+	ENST00000355740.6@FAS	ENST00000355740.6	protein_coding	88990657,89003029,89007700,89008889,89010539,89010753,89011999,89013343,89014119	88990906,89003194,89007837,89008997,89010600,89010815,89012081,89013367,89015785	Gene ID= ENSG00000026103.21 TPM= 1.93 Transcript Type= protein_coding
chr10	89213569	89252058	89213569	89252058	-	ENST00000336233.9@LIPA	ENST00000336233.9	protein_coding	89251737,89247538,89245676,89228200,89226895,89225092,89223684,89222511,89215938,89213569	89252058,89247649,89245793,89228398,89227004,89225228,89223830,89222582,89216009,89215061	Gene ID= ENSG00000107798.17 TPM= 8.69 Transcript Type= protein_coding
chr10	89327894	89340971	89327894	89340971	+	ENST00000371818.8@IFIT3	ENST00000371818.8	protein_coding	89327894,89338661	89328078,89340971	Gene ID= ENSG00000119917.13 TPM= 1.93 Transcript Type= protein_coding
chr10	89332484	89340971	89332484	89340971	+	ENST00000371811.4@IFIT3	ENST00000371811.4	protein_coding	89332484,89338661	89332627,89340971	Gene ID= ENSG00000119917.13 TPM= 5.79 Transcript Type= protein_coding
chr10	89392546	89403988	89392546	89403988	+	ENST00000371804.3@IFIT1	ENST00000371804.3	protein_coding	89392546,89402281	89392717,89403988	Gene ID= ENSG00000185745.9 TPM= 1.93 Transcript Type= protein_coding
chr10	89414586	89421001	89414586	89421001	+	ENST00000371795.4@IFIT5	ENST00000371795.4	protein_coding	89414586,89417205	89414803,89421001	Gene ID= ENSG00000152778.8 TPM= 1.93 Transcript Type= protein_coding
chr10	89579497	89645572	89579497	89645572	-	ENST00000307534.8@PANK1	ENST00000307534.8	protein_coding	89644600,89611696,89599252,89593813,89593197,89588652,89579497	89645572,89612048,89599505,89593989,89593320,89588777,89584465	Gene ID= ENSG00000152782.16 TPM= 1.93 Transcript Type= protein_coding
chr10	89596547	89645248	89596547	89645248	-	transcript2876.chr10.nic@PANK1	transcript2876.chr10.nic	protein_coding	89644600,89611696,89596547	89645248,89612048,89599505	Gene ID= ENSG00000152782.16 TPM= 1.93 Transcript Type= NA
chr10	90871716	90902190	90871716	90902190	+	ENST00000371703.7@RPP30	ENST00000371703.7	protein_coding	90871716,90874869,90875558,90876024,90879063,90885812,90894775,90895454,90895880,90896313,90900570	90872068,90874924,90875614,90876098,90879134,90885901,90894891,90895483,90895917,90896392,90902190	Gene ID= ENSG00000148688.13 TPM= 8.69 Transcript Type= protein_coding
chr10	90912096	90921091	90912096	90921091	-	transcript2893.chr10.nnic@ANKRD1	transcript2893.chr10.nnic	protein_coding	90921001,90920169,90919131,90918865,90917732,90916171,90915782,90915543,90912816,90912096	90921091,90920348,90919268,90918972,90917830,90916269,90915880,90915641,90912976,90912278	Gene ID= ENSG00000148677.6 TPM= 190.33 Transcript Type= NA
chr10	90912096	90921276	90912096	90921276	-	ENST00000371697.3@ANKRD1	ENST00000371697.3	protein_coding	90921001,90920169,90919131,90918865,90917732,90916171,90915782,90915543,90912096	90921276,90920348,90919268,90918972,90917830,90916269,90915880,90915641,90912976	Gene ID= ENSG00000148677.6 TPM= 401.73 Transcript Type= protein_coding
chr10	90917056	90921088	90917056	90921088	-	transcript2905.chr10.nic@ANKRD1	transcript2905.chr10.nic	protein_coding	90921001,90920169,90917056	90921088,90920348,90919268	Gene ID= ENSG00000148677.6 TPM= 8.69 Transcript Type= NA
chr10	91162849	91280978	91162849	91280978	+	transcript2918.chr10.nnic@PCGF5	transcript2918.chr10.nnic	protein_coding	91162849,91222689,91240484,91248505,91248665,91251292,91261326,91264431,91278269	91163081,91222983,91240580,91248560,91248724,91251440,91261424,91264520,91280978	Gene ID= ENSG00000180628.14 TPM= 4.83 Transcript Type= NA
chr10	91162679	91227960	91162679	91227960	+	transcript2921.chr10.nic@PCGF5	transcript2921.chr10.nic	protein_coding	91162679,91222689,91227337	91163081,91222983,91227960	Gene ID= ENSG00000180628.14 TPM= 37.65 Transcript Type= NA
chr10	91220783	91227960	91220783	91227960	+	ENST00000490164.1@PCGF5	ENST00000490164.1	protein_coding	91220783,91222689,91227337	91220836,91222983,91227960	Gene ID= ENSG00000180628.14 TPM= 12.55 Transcript Type= processed_transcript
chr10	91626237	91629038	91626237	91629038	-	transcript2944.chr10.nnic@NA	transcript2944.chr10.nnic	NA	91626237	91629038	Gene ID= novel_gene_chr10_2945 TPM= 6.76 Transcript Type= NA
chr10	91628442	91633054	91628442	91633054	-	ENST00000238994.5@PPP1R3C	ENST00000238994.5	protein_coding	91632956,91628442	91633054,91630866	Gene ID= ENSG00000119938.8 TPM= 473.97 Transcript Type= protein_coding
chr10	91798312	91865276	91798312	91865276	+	ENST00000371627.4@TNKS2	ENST00000371627.4	protein_coding	91798312,91812983,91817134,91819270,91819482,91819939,91822296,91827017,91828285,91830923,91831103,91833853,91836919,91840561,91841283,91842172,91844919,91845752,91848383,91849512,91851216,91855029,91855614,91857425,91859462,91861999,91862937	91798889,91813207,91817229,91819306,91819557,91820033,91822362,91827203,91828406,91831014,91831181,91834024,91836998,91840706,91841448,91842391,91845028,91845940,91848635,91849594,91851336,91855126,91855688,91857530,91859648,91862155,91865276	Gene ID= ENSG00000107854.5 TPM= 9.97 Transcript Type= protein_coding
chr10	91798436	91842779	91798436	91842779	+	transcript2956.chr10.nnic@TNKS2	transcript2956.chr10.nnic	protein_coding	91798436,91811370,91812983,91817134,91819270,91819482,91819939,91822296,91827017,91828285,91830923,91831103,91833853,91836919,91840561,91841283,91842172	91798889,91811398,91813207,91817229,91819306,91819557,91820033,91822362,91827203,91828406,91831014,91831181,91834024,91836998,91840706,91841448,91842779	Gene ID= ENSG00000107854.5 TPM= 2.25 Transcript Type= NA
chr10	91798384	91842779	91798384	91842779	+	transcript2958.chr10.nic@TNKS2	transcript2958.chr10.nic	protein_coding	91798384,91812983,91817134,91819270,91819482,91819939,91822296,91827017,91828285,91830923,91831103,91833853,91836919,91840561,91841283,91842172	91798889,91813207,91817229,91819306,91819557,91820033,91822362,91827203,91828406,91831014,91831181,91834024,91836998,91840706,91841448,91842779	Gene ID= ENSG00000107854.5 TPM= 5.15 Transcript Type= NA
chr10	91907760	91908924	91907760	91908924	-	transcript2965.chr10.nnic@NA	transcript2965.chr10.nnic	NA	91907760	91908924	Gene ID= novel_gene_chr10_2966 TPM= 8.69 Transcript Type= NA
chr10	91923759	91989481	91923759	91989481	+	transcript2969.chr10.nic@BTAF1	transcript2969.chr10.nic	protein_coding	91923759,91935657,91939952,91942422,91951403,91953737,91956528,91957225,91959065,91959785,91959978,91962538,91964077,91966637,91980454,91981643,91982083,91982587,91984201,91989154	91924090,91935780,91940066,91942568,91951566,91953873,91956657,91957293,91959154,91959880,91960154,91962678,91964201,91966757,91980558,91981792,91982225,91982761,91984404,91989481	Gene ID= ENSG00000095564.13 TPM= 1.93 Transcript Type= NA
chr10	91925518	91927059	91925518	91927059	-	transcript2971.chr10.nnic@NA	transcript2971.chr10.nnic	NA	91925518	91927059	Gene ID= novel_gene_chr10_2972 TPM= 3.86 Transcript Type= NA
chr10	92291163	92353964	92291163	92353964	+	ENST00000358935.2@MARCH5	ENST00000358935.2	protein_coding	92291163,92311135,92340673,92349349,92349671,92351091	92291529,92311337,92340803,92349532,92349837,92353964	Gene ID= ENSG00000198060.9 TPM= 20.27 Transcript Type= protein_coding
chr10	92374888	92377453	92374888	92377453	+	transcript2996.chr10.nnic@NA	transcript2996.chr10.nnic	NA	92374888,92375620,92376756	92374920,92376139,92377453	Gene ID= novel_gene_chr10_2997 TPM= 5.79 Transcript Type= NA
chr10	92452247	92574110	92452247	92574110	-	transcript3001.chr10.nic@IDE	transcript3001.chr10.nic	protein_coding	92573922,92537366,92534578,92531748,92514920,92510050,92508728,92508113,92507575,92506442,92504794,92490493,92487196,92483255,92478645,92475884,92474841,92470254,92468879,92465676,92463731,92461191,92456359,92455576,92452247	92574110,92537550,92534785,92531917,92515042,92510162,92508890,92508205,92507666,92506522,92504897,92490595,92487318,92483337,92478789,92475994,92474961,92470345,92468990,92465843,92464003,92461252,92456431,92455643,92454539	Gene ID= ENSG00000119912.15 TPM= 5.31 Transcript Type= NA
chr10	92453714	92574110	92453714	92574110	-	transcript3009.chr10.nnic@IDE	transcript3009.chr10.nnic	protein_coding	92573922,92537366,92534578,92531748,92514920,92510050,92508728,92508113,92507575,92506442,92504794,92490493,92487196,92483255,92475884,92474841,92470254,92468879,92461191,92456359,92455576,92453714	92574110,92537550,92534785,92531917,92515042,92510162,92508890,92508205,92507666,92506522,92504897,92490595,92487318,92483337,92475994,92474961,92470345,92468990,92461252,92456431,92455643,92454539	Gene ID= ENSG00000119912.15 TPM= 2.41 Transcript Type= NA
chr10	92689951	92695646	92689951	92695646	+	ENST00000282728.9@HHEX	ENST00000282728.9	protein_coding	92689951,92692368,92692702,92694547	92690347,92692546,92692752,92695646	Gene ID= ENSG00000152804.10 TPM= 2.9 Transcript Type= protein_coding
chr10	92848520	93059490	92848520	93059490	+	ENST00000260762.10@EXOC6	ENST00000260762.10	protein_coding	92848520,92893349,92894794,92894930,92899599,92909427,92915758,92919982,92928339,92934144,92934310,92935814,92940727,92948274,92952273,92954630,92955580,92974053,92997474,93014194,93056924,93058223	92848634,92893520,92894841,92895020,92899644,92909631,92915913,92920050,92928422,92934190,92934430,92935885,92940824,92948379,92952382,92954741,92955714,92974232,92997615,93014267,93057036,93059490	Gene ID= ENSG00000138190.16 TPM= 9.65 Transcript Type= protein_coding
chr10	93681583	93702591	93681583	93702591	-	transcript3034.chr10.nic@FRA10AC1	transcript3034.chr10.nic	protein_coding	93702375,93700030,93698301,93698136,93694861,93692646,93692009,93687404,93685246,93684056,93681583	93702591,93700106,93698396,93698181,93694937,93692729,93692093,93687449,93685359,93684098,93681598	Gene ID= ENSG00000148690.11 TPM= 2.9 Transcript Type= NA
chr10	94333226	94362988	94333226	94362988	-	transcript3048.chr10.nnic@NOC3L	transcript3048.chr10.nnic	protein_coding	94362830,94361665,94358083,94357174,94356535,94354963,94352896,94352310,94350113,94349250,94346425,94344853,94341673,94340433,94340276,94339739,94338608,94337777,94334634,94333226	94362988,94361872,94358215,94357331,94356591,94355093,94353057,94352403,94350288,94349378,94346556,94344933,94341745,94340496,94340347,94339920,94338736,94337874,94334718,94334305	Gene ID= ENSG00000173145.11 TPM= 2.9 Transcript Type= NA
chr10	94333226	94362939	94333226	94362939	-	ENST00000371361.3@NOC3L	ENST00000371361.3	protein_coding	94362830,94361665,94358083,94357174,94356535,94354963,94352896,94352310,94350113,94349250,94346425,94344853,94344415,94341673,94340433,94340276,94339739,94338608,94337777,94334634,94333226	94362939,94361872,94358215,94357331,94356591,94355093,94353057,94352403,94350288,94349378,94346556,94344933,94344515,94341745,94340496,94340347,94339920,94338736,94337874,94334718,94334305	Gene ID= ENSG00000173145.11 TPM= 25.1 Transcript Type= protein_coding
chr10	95237572	95277363	95237572	95277363	-	transcript3060.chr10.nnic@PDLIM1	transcript3060.chr10.nnic	protein_coding	95276661,95271633,95268778,95263864,95247215,95238568,95237572	95277363,95271784,95268862,95264063,95247366,95238685,95238111	Gene ID= ENSG00000107438.8 TPM= 38.61 Transcript Type= NA
chr10	95237572	95291024	95237572	95291024	-	ENST00000329399.6@PDLIM1	ENST00000329399.6	protein_coding	95290820,95271633,95268778,95263864,95247215,95238568,95237572	95291024,95271784,95268862,95264063,95247366,95238685,95238111	Gene ID= ENSG00000107438.8 TPM= 768.39 Transcript Type= protein_coding
chr10	95312622	95415702	95312622	95415702	-	transcript3077.chr10.nic@SORBS1	transcript3077.chr10.nic	protein_coding	95415469,95414494,95410633,95406118,95399017,95397220,95395001,95394611,95384238,95383985,95381685,95375973,95371984,95371326,95367650,95357631,95354882,95351209,95346406,95341564,95341285,95339133,95336521,95321963,95318320,95312622	95415702,95414862,95410777,95406147,95399189,95397283,95395075,95394673,95384285,95384114,95381799,95376056,95372049,95371427,95367699,95357803,95354967,95351376,95346452,95341678,95341410,95339327,95337294,95322021,95318432,95315126	Gene ID= ENSG00000095637.21 TPM= 56.47 Transcript Type= NA
chr10	95341584	95561373	95341584	95561373	-	ENST00000474353.6@SORBS1	ENST00000474353.6	protein_coding	95561320,95491035,95441126,95437490,95432448,95421961,95415469,95414494,95410633,95406118,95399017,95397220,95384238,95383985,95381685,95367650,95357631,95354882,95351216,95346406,95341584	95561373,95491120,95441180,95437555,95432576,95422073,95416185,95414862,95410777,95406147,95399189,95397283,95384285,95384114,95381799,95367699,95357803,95354967,95351376,95346452,95341678	Gene ID= ENSG00000095637.21 TPM= 5.31 Transcript Type= processed_transcript
chr10	95330499	95333737	95330499	95333737	-	transcript3096.chr10.nnic@NA	transcript3096.chr10.nnic	NA	95330499	95333737	Gene ID= novel_gene_chr10_3097 TPM= 1.93 Transcript Type= NA
chr10	95387983	95390782	95387983	95390782	-	transcript3094.chr10.nnic@NA	transcript3094.chr10.nnic	NA	95387983	95390782	Gene ID= novel_gene_chr10_3095 TPM= 2.9 Transcript Type= NA
chr10	95410685	95413998	95410685	95413998	+	transcript3092.chr10.nnic@NA	transcript3092.chr10.nnic	NA	95410685	95413998	Gene ID= novel_gene_chr10_3093 TPM= 39.58 Transcript Type= NA
chr10	95605929	95656706	95605929	95656706	-	ENST00000371224.6@ALDH18A1	ENST00000371224.6	protein_coding	95656597,95653290,95642992,95637287,95637093,95633491,95632959,95628368,95627442,95626703,95625362,95621031,95616477,95613966,95613742,95611256,95610197,95605929	95656706,95653405,95643206,95637436,95637197,95633649,95633049,95628492,95627586,95626776,95625455,95621251,95616614,95614161,95613863,95611442,95610292,95606943	Gene ID= ENSG00000059573.8 TPM= 4.83 Transcript Type= protein_coding
chr10	95663401	95693944	95663401	95693944	-	transcript3101.chr10.nnic@TCTN3	transcript3101.chr10.nnic	protein_coding	95693644,95693353,95692920,95687247,95687044,95686495,95685556,95684499,95683522,95683101,95682651,95680472,95663401	95693944,95693476,95693038,95687355,95687159,95686530,95685636,95684624,95683629,95683195,95682804,95680609,95664300	Gene ID= ENSG00000119977.20 TPM= 5.79 Transcript Type= NA
chr10	95756160	95866696	95756160	95866696	+	transcript3108.chr10.nnic@ENTPD1	transcript3108.chr10.nnic	protein_coding	95756160,95823237,95839691,95842344,95844476,95845357,95847569,95860469,95864724,95866177	95756255,95823364,95839808,95842494,95844635,95845596,95847706,95860582,95864861,95866696	Gene ID= ENSG00000138185.19 TPM= 1.93 Transcript Type= NA
chr10	95873045	95907866	95873045	95907866	-	transcript3112.chr10.nnic@ENTPD1-AS1	transcript3112.chr10.nnic	antisense_RNA	95907663,95876518,95873045	95907866,95876660,95875666	Gene ID= ENSG00000226688.6 TPM= 2.9 Transcript Type= NA
chr10	95872997	95907867	95872997	95907867	-	transcript3114.chr10.nnic@ENTPD1-AS1	transcript3114.chr10.nnic	antisense_RNA	95907778,95872997	95907867,95876660	Gene ID= ENSG00000226688.6 TPM= 2.9 Transcript Type= NA
chr10	96043394	96060870	96043394	96060870	+	ENST00000265992.9@CCNJ	ENST00000265992.9	protein_coding	96043394,96044353,96050256,96056701,96057121,96057830	96043719,96044462,96050466,96057000,96057247,96060870	Gene ID= ENSG00000107443.15 TPM= 4.83 Transcript Type= protein_coding
chr10	96518109	96587052	96518109	96587052	-	ENST00000371142.8@TM9SF3	ENST00000371142.8	protein_coding	96586734,96576634,96565304,96561978,96559659,96552928,96551245,96547895,96544076,96533051,96530540,96528031,96527413,96527213,96518109	96587052,96576829,96565426,96562138,96559736,96553059,96551411,96547989,96544206,96533190,96530608,96528177,96527496,96527289,96522330	Gene ID= ENSG00000077147.14 TPM= 16.41 Transcript Type= protein_coding
chr10	96750288	96750899	96750288	96750899	+	ENST00000439189.1@RPL13AP5	ENST00000439189.1	processed_pseudogene	96750288	96750899	Gene ID= ENSG00000236552.2 TPM= 299.25 Transcript Type= processed_pseudogene
chr10	96832282	96964441	96832282	96964441	+	ENST00000371103.8@LCOR	ENST00000371103.8	protein_coding	96832282,96833406,96907265,96907668,96944113,96949008,96952103,96954953	96832399,96833479,96907330,96907747,96944245,96949295,96952196,96964441	Gene ID= ENSG00000196233.13 TPM= 4.83 Transcript Type= protein_coding
chr10	97319241	97321823	97319241	97321823	+	transcript3144.chr10.nnic@NA	transcript3144.chr10.nnic	NA	97319241	97321823	Gene ID= novel_gene_chr10_3145 TPM= 3.86 Transcript Type= NA
chr10	97332497	97334709	97332497	97334709	-	ENST00000371019.3@FRAT2	ENST00000371019.3	protein_coding	97332497	97334709	Gene ID= ENSG00000181274.6 TPM= 55.99 Transcript Type= protein_coding
chr10	97356701	97426074	97356701	97426074	-	ENST00000536831.5@RRP12	ENST00000536831.5	protein_coding	97426023,97401093,97400305,97396218,97393684,97390739,97390423,97388489,97388252,97385895,97385166,97381715,97381386,97380799,97379628,97379293,97373830,97373575,97373046,97372736,97372073,97370923,97370716,97370455,97370167,97369425,97367041,97366742,97366446,97366108,97363854,97360546,97358943,97358537,97356701	97426074,97401368,97400534,97396301,97393760,97390844,97390539,97388624,97388379,97385993,97385257,97381826,97381483,97380913,97379770,97379414,97373894,97373737,97373200,97372803,97372166,97371081,97370796,97370560,97370274,97369582,97367132,97366909,97366621,97366233,97363903,97360618,97359010,97358619,97357196	Gene ID= ENSG00000052749.13 TPM= 390.95 Transcript Type= protein_coding
chr10	97426160	97433441	97426160	97433441	+	ENST00000334828.5@PGAM1	ENST00000334828.5	protein_coding	97426160,97430379,97430955,97432355	97426446,97430653,97431135,97433441	Gene ID= ENSG00000171314.8 TPM= 124.53 Transcript Type= protein_coding
chr10	97446139	97457366	97446139	97457366	+	transcript3175.chr10.nic@ZDHHC16	transcript3175.chr10.nic	protein_coding	97446139,97451671,97452090,97452415,97452807,97453530,97453799,97454714,97455660,97455974,97456777	97446353,97451918,97452284,97452503,97452923,97453663,97453846,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 3.52 Transcript Type= NA
chr10	97446139	97457366	97446139	97457366	+	transcript3185.chr10.nic@ZDHHC16	transcript3185.chr10.nic	protein_coding	97446139,97451671,97452415,97453618,97453799,97454714,97455660,97455974,97456777	97446353,97451918,97452503,97453663,97453846,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 2.32 Transcript Type= NA
chr10	97446204	97457366	97446204	97457366	+	ENST00000353979.7@ZDHHC16	ENST00000353979.7	protein_coding	97446204,97451671,97452090,97452415,97453618,97453799,97454714,97455660,97455974,97456777	97446353,97451918,97452284,97452503,97453663,97453846,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 15.11 Transcript Type= protein_coding
chr10	97446202	97457366	97446202	97457366	+	ENST00000352634.8@ZDHHC16	ENST00000352634.8	protein_coding	97446202,97451671,97452090,97452415,97452895,97453530,97454714,97455660,97455974,97456777	97446353,97451918,97452284,97452503,97452923,97453663,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 6.42 Transcript Type= protein_coding
chr10	97446170	97457366	97446170	97457366	+	ENST00000370854.7@ZDHHC16	ENST00000370854.7	protein_coding	97446170,97451671,97452090,97452415,97452895,97453530,97453799,97454714,97455660,97455974,97456777	97446353,97451918,97452284,97452503,97452923,97453663,97453846,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 25.73 Transcript Type= protein_coding
chr10	97446175	97447936	97446175	97447936	+	transcript3187.chr10.nnic@NA	transcript3187.chr10.nnic	NA	97446175	97447936	Gene ID= novel_gene_chr10_3188 TPM= 2.9 Transcript Type= NA
chr10	97458324	97498720	97458324	97498720	-	ENST00000438925.6@MMS19	ENST00000438925.6	protein_coding	97498273,97484103,97480942,97478304,97477855,97477347,97476835,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458324	97498720,97484151,97481042,97478389,97477929,97477416,97476963,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466159,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719	Gene ID= ENSG00000155229.20 TPM= 24.62 Transcript Type= protein_coding
chr10	97458326	97498609	97458326	97498609	-	ENST00000355839.10@MMS19	ENST00000355839.10	protein_coding	97498273,97484103,97480942,97478304,97477855,97477347,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458326	97498609,97484151,97481042,97478389,97477929,97477416,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466159,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719	Gene ID= ENSG00000155229.20 TPM= 6.27 Transcript Type= protein_coding
chr10	97498868	97571209	97498868	97571209	+	ENST00000370664.3@UBTD1	ENST00000370664.3	protein_coding	97498868,97567914,97570138	97499273,97568141,97571209	Gene ID= ENSG00000165886.4 TPM= 99.43 Transcript Type= protein_coding
chr10	97572542	97583884	97572542	97583884	+	transcript3211.chr10.nic@ANKRD2	transcript3211.chr10.nic	protein_coding	97572542,97577800,97578240,97578498,97580855,97581316,97582315,97583576	97572875,97577901,97578398,97578605,97580953,97581414,97582702,97583884	Gene ID= ENSG00000165887.11 TPM= 42.47 Transcript Type= NA
chr10	97572566	97583884	97572566	97583884	+	transcript3217.chr10.nic@ANKRD2	transcript3217.chr10.nic	protein_coding	97572566,97577800,97578240,97578498,97580855,97581316,97582315	97572875,97577901,97578398,97578605,97580953,97581414,97583884	Gene ID= ENSG00000165887.11 TPM= 30.34 Transcript Type= NA
chr10	97572499	97583884	97572499	97583884	+	ENST00000370655.5@ANKRD2	ENST00000370655.5	protein_coding	97572499,97577800,97578240,97578498,97580855,97581316,97582315,97582604,97583576	97572875,97577901,97578398,97578605,97580953,97581414,97582413,97582702,97583884	Gene ID= ENSG00000165887.11 TPM= 904.69 Transcript Type= protein_coding
chr10	97572779	97575924	97572779	97575924	+	transcript3231.chr10.nnic@NA	transcript3231.chr10.nnic	NA	97572779	97575924	Gene ID= novel_gene_chr10_3232 TPM= 5.79 Transcript Type= NA
chr10	97579309	97582277	97579309	97582277	-	transcript3239.chr10.nnic@NA	transcript3239.chr10.nnic	NA	97579309	97582277	Gene ID= novel_gene_chr10_3240 TPM= 6.76 Transcript Type= NA
chr10	97614553	97633480	97614553	97633480	-	ENST00000307450.10@MORN4	ENST00000307450.10	protein_coding	97633347,97619587,97617208,97616678,97614553	97633480,97619683,97617322,97616787,97616411	Gene ID= ENSG00000171160.17 TPM= 1.93 Transcript Type= protein_coding
chr10	97640686	97676434	97640686	97676434	+	ENST00000370631.3@PI4K2A	ENST00000370631.3	protein_coding	97640686,97650941,97656285,97656821,97662907,97664885,97666438,97667061,97673581	97641177,97651141,97656416,97656974,97662968,97664984,97666571,97667120,97676434	Gene ID= ENSG00000155252.13 TPM= 8.69 Transcript Type= protein_coding
chr10	97713724	97718152	97713724	97718152	+	ENST00000285605.7@MARVELD1	ENST00000285605.7	protein_coding	97713724,97717194	97715985,97718152	Gene ID= ENSG00000155254.12 TPM= 5.79 Transcript Type= protein_coding
chr10	97737092	97760895	97737092	97760895	+	transcript3256.chr10.nic@ZFYVE27	transcript3256.chr10.nic	protein_coding	97737092,97738477,97743094,97744729,97748269,97749474,97750331,97751376,97753038,97757265,97757642,97759236	97737321,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 7.95 Transcript Type= NA
chr10	97737128	97760895	97737128	97760895	+	transcript3262.chr10.nnic@ZFYVE27	transcript3262.chr10.nnic	protein_coding	97737128,97743094,97744729,97748269,97749474,97750331,97751391,97753038,97757265,97757642,97759236	97737321,97743164,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 2.96 Transcript Type= NA
chr10	97737121	97760906	97737121	97760906	+	ENST00000370610.7@ZFYVE27	ENST00000370610.7	protein_coding	97737121,97744729,97748269,97749474,97750331,97751376,97753038,97757265,97757642,97759236	97737321,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760906	Gene ID= ENSG00000155256.17 TPM= 2.16 Transcript Type= protein_coding
chr10	97737140	97760895	97737140	97760895	+	ENST00000359980.5@ZFYVE27	ENST00000359980.5	protein_coding	97737140,97738477,97743094,97744729,97748269,97749474,97750331,97751391,97753038,97757265,97757642,97759236	97737325,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 21.3 Transcript Type= protein_coding
chr10	97737128	97760895	97737128	97760895	+	ENST00000423811.3@ZFYVE27	ENST00000423811.3	protein_coding	97737128,97738477,97743094,97744729,97748269,97749474,97750331,97751376,97752857,97753038,97757265,97757642,97759236	97737325,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97752877,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 6.51 Transcript Type= protein_coding
chr10	97737123	97760907	97737123	97760907	+	ENST00000393677.8@ZFYVE27	ENST00000393677.8	protein_coding	97737123,97738477,97743094,97744729,97748269,97749474,97750331,97751391,97752857,97753038,97757265,97757642,97759236	97737325,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97752877,97753182,97757311,97757723,97760907	Gene ID= ENSG00000155256.17 TPM= 2.48 Transcript Type= protein_coding
chr10	97737121	97760906	97737121	97760906	+	ENST00000370613.7@ZFYVE27	ENST00000370613.7	protein_coding	97737121,97738477,97749474,97750331,97751391,97753038,97757265,97757642,97759236	97737321,97738674,97749586,97750470,97751462,97753182,97757311,97757723,97760906	Gene ID= ENSG00000155256.17 TPM= 2 Transcript Type= protein_coding
chr10	97821897	97842480	97821897	97842480	+	transcript3286.chr10.nnic@NA	transcript3286.chr10.nnic	NA	97821897,97840825	97821949,97842480	Gene ID= novel_gene_chr10_3287 TPM= 9.17 Transcript Type= NA
chr10	97822348	97842480	97822348	97842480	+	transcript3283.chr10.nnic@NA	transcript3283.chr10.nnic	NA	97822348,97840825,97841400	97822688,97840934,97842480	Gene ID= novel_gene_chr10_3284 TPM= 7.24 Transcript Type= NA
chr10	97849862	97867744	97849862	97867744	+	transcript3281.chr10.nnic@GOLGA7B	transcript3281.chr10.nnic	protein_coding	97849862,97863930,97864168,97865590	97850315,97864082,97864269,97867744	Gene ID= ENSG00000155265.10 TPM= 7.72 Transcript Type= NA
chr10	98134614	98244894	98134614	98244894	+	transcript3292.chr10.nnic@R3HCC1L	transcript3292.chr10.nnic	protein_coding	98134614,98162883,98163293,98186467,98208101,98231512,98234446,98235425,98236024,98244091	98134706,98162975,98163397,98186563,98209899,98231687,98234516,98235520,98236164,98244894	Gene ID= ENSG00000166024.13 TPM= 4.49 Transcript Type= NA
chr10	98134614	98244894	98134614	98244894	+	transcript3294.chr10.nnic@R3HCC1L	transcript3294.chr10.nnic	protein_coding	98134614,98162883,98163293,98208101,98231512,98234446,98235425,98236024,98244091	98134706,98162975,98163397,98209899,98231687,98234516,98235520,98236164,98244894	Gene ID= ENSG00000166024.13 TPM= 5.45 Transcript Type= NA
chr10	98134614	98244894	98134614	98244894	+	transcript3297.chr10.nnic@R3HCC1L	transcript3297.chr10.nnic	protein_coding	98134614,98162883,98163293,98208101,98231512,98235425,98236024,98244091	98134706,98162975,98163397,98209899,98231687,98235520,98236164,98244894	Gene ID= ENSG00000166024.13 TPM= 2.32 Transcript Type= NA
chr10	98134658	98244894	98134658	98244894	+	transcript3299.chr10.nic@R3HCC1L	transcript3299.chr10.nic	protein_coding	98134658,98163293,98208101,98231512,98234446,98235425,98236024,98244091	98134706,98163397,98209899,98231687,98234516,98235520,98236164,98244894	Gene ID= ENSG00000166024.13 TPM= 2.56 Transcript Type= NA
chr10	98134671	98244897	98134671	98244897	+	ENST00000298999.7@R3HCC1L	ENST00000298999.7	protein_coding	98134671,98156093,98162883,98163293,98208101,98231512,98234446,98235425,98236024,98244091	98134706,98156147,98162975,98163397,98209899,98231687,98234516,98235520,98236164,98244897	Gene ID= ENSG00000166024.13 TPM= 2.56 Transcript Type= protein_coding
chr10	98247690	98268265	98247690	98268265	-	transcript3303.chr10.nnic@LOXL4	transcript3303.chr10.nnic	protein_coding	98268132,98267631,98262743,98262035,98260922,98259391,98259009,98257981,98257650,98256780,98255577,98253553,98252353,98251566,98251065,98247690	98268265,98267822,98263051,98262213,98261127,98259429,98259228,98258164,98257804,98256947,98255739,98253796,98252468,98251702,98251176,98248991	Gene ID= ENSG00000138131.3 TPM= 6.76 Transcript Type= NA
chr10	98247794	98268194	98247794	98268194	-	transcript3316.chr10.nnic@LOXL4	transcript3316.chr10.nnic	protein_coding	98268132,98267631,98262743,98262035,98260922,98259391,98259009,98257650,98256780,98255577,98253553,98252353,98251566,98251065,98247794	98268194,98267822,98263051,98262213,98261127,98259429,98259228,98257804,98256947,98255739,98253796,98252468,98251702,98251176,98248991	Gene ID= ENSG00000138131.3 TPM= 1.93 Transcript Type= NA
chr10	98247794	98268194	98247794	98268194	-	transcript3321.chr10.nnic@LOXL4	transcript3321.chr10.nnic	protein_coding	98268132,98262743,98262035,98260922,98259391,98259009,98257650,98256780,98255577,98253553,98252353,98251566,98251065,98247794	98268194,98263051,98262213,98261127,98259429,98259228,98257804,98256947,98255739,98253796,98252468,98251702,98251176,98248991	Gene ID= ENSG00000138131.3 TPM= 1.93 Transcript Type= NA
chr10	98247690	98268250	98247690	98268250	-	ENST00000260702.3@LOXL4	ENST00000260702.3	protein_coding	98268132,98262743,98262035,98260922,98259391,98259009,98257981,98257650,98256780,98255577,98253553,98252353,98251566,98251065,98247690	98268250,98263051,98262213,98261127,98259429,98259228,98258164,98257804,98256947,98255739,98253796,98252468,98251702,98251176,98248991	Gene ID= ENSG00000138131.3 TPM= 23.17 Transcript Type= protein_coding
chr10	98413949	98415596	98413949	98415596	-	transcript3342.chr10.nnic@NA	transcript3342.chr10.nnic	NA	98413949	98415596	Gene ID= novel_gene_chr10_3343 TPM= 1.93 Transcript Type= NA
chr10	98417015	98446941	98417015	98446941	-	transcript3332.chr10.nic@HPS1	transcript3332.chr10.nic	protein_coding	98446807,98445300,98443124,98435635,98435272,98433983,98431131,98430571,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98417015	98446941,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726	Gene ID= ENSG00000107521.18 TPM= 11.58 Transcript Type= NA
chr10	98433466	98446941	98433466	98446941	-	transcript3337.chr10.nic@HPS1	transcript3337.chr10.nic	protein_coding	98446807,98445300,98443124,98435635,98433466	98446941,98445413,98443240,98435772,98434091	Gene ID= ENSG00000107521.18 TPM= 1.93 Transcript Type= NA
chr10	99396870	99430593	99396870	99430593	-	ENST00000370508.5@GOT1	ENST00000370508.5	protein_coding	99430448,99420624,99406726,99406137,99405756,99403724,99403469,99402580,99396870	99430593,99420805,99406849,99406249,99405860,99403874,99403634,99402722,99397686	Gene ID= ENSG00000120053.10 TPM= 160.72 Transcript Type= protein_coding
chr10	99430919	99438117	99430919	99438117	+	transcript3356.chr10.nnic@AL391684.1	transcript3356.chr10.nnic	lincRNA	99430919,99433546,99433740,99434639,99437631	99431265,99433631,99433940,99434759,99438117	Gene ID= ENSG00000224934.3 TPM= 2.9 Transcript Type= NA
chr10	99431902	99435889	99431902	99435889	-	transcript3364.chr10.nnic@NA	transcript3364.chr10.nnic	NA	99431902	99435889	Gene ID= novel_gene_chr10_3365 TPM= 5.79 Transcript Type= NA
chr10	99610522	99620484	99610522	99620484	-	transcript3367.chr10.nnic@SLC25A28	transcript3367.chr10.nnic	protein_coding	99620045,99613416,99612543,99610522	99620484,99613924,99612599,99611366	Gene ID= ENSG00000155287.10 TPM= 3.46 Transcript Type= NA
chr10	99610522	99620484	99610522	99620484	-	transcript3371.chr10.nnic@SLC25A28	transcript3371.chr10.nnic	protein_coding	99620045,99613733,99612543,99610522	99620484,99613924,99612599,99611366	Gene ID= ENSG00000155287.10 TPM= 4.42 Transcript Type= NA
chr10	99610522	99620484	99610522	99620484	-	transcript3375.chr10.nic@SLC25A28	transcript3375.chr10.nic	protein_coding	99620045,99612543,99610522	99620484,99613924,99611366	Gene ID= ENSG00000155287.10 TPM= 15.69 Transcript Type= NA
chr10	99610522	99620360	99610522	99620360	-	transcript3377.chr10.nnic@SLC25A28	transcript3377.chr10.nnic	protein_coding	99619727,99610522	99620360,99613924	Gene ID= ENSG00000155287.10 TPM= 3.86 Transcript Type= NA
chr10	99610522	99620364	99610522	99620364	-	ENST00000370495.5@SLC25A28	ENST00000370495.5	protein_coding	99620045,99613696,99612543,99610522	99620364,99613924,99612599,99611366	Gene ID= ENSG00000155287.10 TPM= 10.21 Transcript Type= protein_coding
chr10	99621055	99621918	99621055	99621918	+	ENST00000566847.1@AL353719.1	ENST00000566847.1	lincRNA	99621055	99621918	Gene ID= ENSG00000260475.1 TPM= 3.86 Transcript Type= lincRNA
chr10	99711844	99732100	99711844	99732100	-	ENST00000370483.9@COX15	ENST00000370483.9	protein_coding	99731960,99729553,99727441,99726968,99723956,99720987,99718346,99716348,99711844	99732100,99729734,99727563,99727154,99724123,99721068,99718500,99716461,99713479	Gene ID= ENSG00000014919.12 TPM= 2.9 Transcript Type= protein_coding
chr10	99713515	99732100	99713515	99732100	-	ENST00000016171.5@COX15	ENST00000016171.5	protein_coding	99731960,99729553,99727441,99726968,99723956,99720987,99718346,99716348,99713515	99732100,99729734,99727563,99727154,99724123,99721068,99718500,99716461,99714718	Gene ID= ENSG00000014919.12 TPM= 10.62 Transcript Type= protein_coding
chr10	99732156	99756134	99732156	99756134	+	transcript3392.chr10.nnic@CUTC	transcript3392.chr10.nnic	protein_coding	99732156,99736246,99739710,99743153,99744037,99747257,99750369,99754529,99755625	99732409,99736317,99739769,99743347,99744072,99747390,99750396,99754634,99756134	Gene ID= ENSG00000119929.12 TPM= 5.79 Transcript Type= NA
chr10	99732218	99756134	99732218	99756134	+	transcript3397.chr10.nnic@CUTC	transcript3397.chr10.nnic	protein_coding	99732218,99736246,99739710,99743153,99744037,99747257,99750369,99754529,99755625	99732356,99736317,99739769,99743362,99744072,99747390,99750396,99754634,99756134	Gene ID= ENSG00000119929.12 TPM= 5.79 Transcript Type= NA
chr10	99732220	99756134	99732220	99756134	+	ENST00000370476.9@CUTC	ENST00000370476.9	protein_coding	99732220,99736246,99739710,99743153,99744037,99747257,99750369,99754529,99755625	99732409,99736317,99739769,99743362,99744072,99747390,99750396,99754634,99756134	Gene ID= ENSG00000119929.12 TPM= 178.58 Transcript Type= protein_coding
chr10	99875577	100009919	99875577	100009919	-	ENST00000324109.8@DNMBP	ENST00000324109.8	protein_coding	100009838,99971980,99969115,99955214,99908953,99907995,99899919,99898743,99898086,99896267,99894946,99888825,99886300,99885687,99884011,99879811,99875577	100009919,99972134,99969237,99957205,99909146,99908094,99900066,99898760,99898285,99896397,99895050,99888953,99886632,99885866,99884209,99880361,99877336	Gene ID= ENSG00000107554.16 TPM= 8.69 Transcript Type= protein_coding
chr10	100150094	100186028	100150094	100186028	-	transcript3411.chr10.nic@ERLIN1	transcript3411.chr10.nic	protein_coding	100185904,100185514,100183756,100179201,100178133,100175945,100174208,100167348,100164004,100156145,100154860,100150094	100186028,100185637,100183837,100179247,100178194,100176070,100174281,100167406,100164095,100156234,100154939,100152352	Gene ID= ENSG00000107566.13 TPM= 7.72 Transcript Type= NA
chr10	100151808	100186033	100151808	100186033	-	ENST00000407654.7@ERLIN1	ENST00000407654.7	protein_coding	100185962,100185514,100183756,100179201,100178133,100175945,100174208,100167348,100164004,100156145,100154860,100151808	100186033,100185637,100183837,100179247,100178194,100176070,100174281,100167406,100164095,100156234,100154939,100152352	Gene ID= ENSG00000107566.13 TPM= 1.93 Transcript Type= protein_coding
chr10	100188367	100229607	100188367	100229607	-	transcript3419.chr10.nnic@CHUK	transcript3419.chr10.nnic	protein_coding	100229428,100225923,100222866,100222112,100220588,100219270,100219008,100218718,100217995,100209595,100207230,100205076,100204506,100202088,100200671,100199971,100194425,100193984,100193298,100192459,100190869,100188367	100229607,100226017,100222980,100222181,100220676,100219359,100219132,100218825,100218130,100209789,100207332,100205199,100204657,100202149,100200780,100200020,100194521,100194131,100193431,100192693,100190968,100189627	Gene ID= ENSG00000213341.10 TPM= 7.72 Transcript Type= NA
chr10	100188298	100229619	100188298	100229619	-	ENST00000370397.7@CHUK	ENST00000370397.7	protein_coding	100229428,100225923,100222866,100222112,100220588,100219270,100219008,100218718,100217995,100209595,100207230,100205076,100204506,100202088,100200671,100199971,100194425,100193984,100193298,100190869,100188298	100229619,100226017,100222980,100222181,100220676,100219359,100219132,100218825,100218130,100209789,100207332,100205199,100204657,100202149,100200780,100200020,100194521,100194131,100193431,100190968,100189627	Gene ID= ENSG00000213341.10 TPM= 34.75 Transcript Type= protein_coding
chr10	100232298	100267668	100232298	100267668	-	transcript3433.chr10.nnic@CWF19L1	transcript3433.chr10.nnic	protein_coding	100267571,100253421,100250248,100246795,100245799,100243698,100238022,100236850,100235667,100232298	100267668,100253539,100250313,100246935,100245913,100243777,100238231,100236969,100235764,100233371	Gene ID= ENSG00000095485.17 TPM= 2.41 Transcript Type= NA
chr10	100232298	100267680	100232298	100267680	-	ENST00000468709.5@CWF19L1	ENST00000468709.5	protein_coding	100267571,100261979,100260966,100260218,100253421,100250248,100246795,100245799,100243698,100238022,100236850,100235667,100232298	100267680,100262063,100261028,100260319,100253539,100250332,100246935,100245913,100243777,100238231,100236969,100235764,100233371	Gene ID= ENSG00000095485.17 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chr10	100274695	100286707	100274695	100286707	-	transcript3436.chr10.nnic@BLOC1S2	transcript3436.chr10.nnic	protein_coding	100286605,100286097,100282906,100280934,100280124,100274695	100286707,100286213,100283013,100281053,100280228,100275493	Gene ID= ENSG00000196072.11 TPM= 4.83 Transcript Type= NA
chr10	100274695	100286712	100274695	100286712	-	ENST00000370372.6@BLOC1S2	ENST00000370372.6	protein_coding	100286605,100286097,100280934,100280124,100274695	100286712,100286213,100281053,100280228,100275493	Gene ID= ENSG00000196072.11 TPM= 89.77 Transcript Type= protein_coding
chr10	100280041	100286707	100280041	100286707	-	transcript3439.chr10.nic@BLOC1S2	transcript3439.chr10.nic	protein_coding	100286605,100286097,100280934,100280041	100286707,100286213,100281053,100280228	Gene ID= ENSG00000196072.11 TPM= 3.86 Transcript Type= NA
chr10	100347124	100364834	100347124	100364834	+	ENST00000370355.2@SCD	ENST00000370355.2	protein_coding	100347124,100348064,100352366,100354427,100356532,100360734	100347531,100348346,100352496,100354632,100356764,100364834	Gene ID= ENSG00000099194.5 TPM= 2.9 Transcript Type= protein_coding
chr10	100523743	100530000	100523743	100530000	-	ENST00000370322.5@NDUFB8	ENST00000370322.5	protein_coding	100529858,100529380,100526975,100526399,100523743	100530000,100529506,100527074,100526554,100523929	Gene ID= ENSG00000166136.15 TPM= 8.21 Transcript Type= protein_coding
chr10	100523740	100529864	100523740	100529864	-	ENST00000299166.8@NDUFB8	ENST00000299166.8	protein_coding	100529767,100529380,100526975,100526399,100523740	100529864,100529506,100527074,100526554,100523929	Gene ID= ENSG00000166136.15 TPM= 133.7 Transcript Type= protein_coding
chr10	100523740	100526598	100523740	100526598	-	ENST00000464651.1@NDUFB8	ENST00000464651.1	protein_coding	100526399,100523740	100526598,100523929	Gene ID= ENSG00000166136.15 TPM= 42.47 Transcript Type= retained_intron
chr10	100535928	100550006	100535928	100550006	+	transcript3459.chr10.nnic@HIF1AN	transcript3459.chr10.nnic	protein_coding	100535928,100536411,100540634,100544951,100545943,100546518,100547140,100548093	100536195,100536661,100540782,100545096,100546049,100546581,100547250,100550006	Gene ID= ENSG00000166135.13 TPM= 15.13 Transcript Type= NA
chr10	100535936	100550006	100535936	100550006	+	transcript3461.chr10.nic@HIF1AN	transcript3461.chr10.nic	protein_coding	100535936,100536411,100540634,100544951,100545943,100546518,100547140,100548093	100536050,100536661,100540782,100545096,100546049,100546581,100547250,100550006	Gene ID= ENSG00000166135.13 TPM= 22.85 Transcript Type= NA
chr10	100548097	100553917	100548097	100553917	+	transcript3468.chr10.nnic@NA	transcript3468.chr10.nnic	NA	100548097	100553917	Gene ID= novel_gene_chr10_3469 TPM= 32.82 Transcript Type= NA
chr10	100554810	100557422	100554810	100557422	+	transcript3470.chr10.nnic@NA	transcript3470.chr10.nnic	NA	100554810	100557422	Gene ID= novel_gene_chr10_3471 TPM= 1.93 Transcript Type= NA
chr10	100912569	100965136	100912569	100965136	+	ENST00000238961.8@SLF2	ENST00000238961.8	protein_coding	100912569,100915999,100916570,100918384,100923975,100925949,100929317,100929830,100930976,100937402,100938595,100944026,100945330,100947039,100947760,100950076,100950676,100956451,100959428,100961877	100913250,100916042,100917300,100918441,100924972,100926019,100929439,100929997,100931078,100937477,100938736,100944128,100945506,100947136,100947847,100950207,100950753,100956537,100959496,100965136	Gene ID= ENSG00000119906.11 TPM= 4.83 Transcript Type= protein_coding
chr10	100977821	100987497	100977821	100987497	-	ENST00000318325.6@MRPL43	ENST00000318325.6	protein_coding	100987313,100987090,100986749,100983755,100977821	100987497,100987196,100986975,100983817,100979372	Gene ID= ENSG00000055950.16 TPM= 1.93 Transcript Type= protein_coding
chr10	100981376	100987494	100981376	100987494	-	ENST00000299179.9@MRPL43	ENST00000299179.9	protein_coding	100987313,100987090,100986749,100983755,100981376	100987494,100987196,100986975,100983817,100981543	Gene ID= ENSG00000055950.16 TPM= 12.55 Transcript Type= protein_coding
chr10	100986276	100987515	100986276	100987515	-	ENST00000318364.12@MRPL43	ENST00000318364.12	protein_coding	100987313,100987090,100986276	100987515,100987196,100986975	Gene ID= ENSG00000055950.16 TPM= 45.37 Transcript Type= protein_coding
chr10	100986280	100987483	100986280	100987483	-	ENST00000370234.4@MRPL43	ENST00000370234.4	protein_coding	100987313,100987090,100986749,100986280	100987483,100987196,100986975,100986572	Gene ID= ENSG00000055950.16 TPM= 2.9 Transcript Type= protein_coding
chr10	100988026	100994401	100988026	100994401	+	ENST00000311916.6@TWNK	ENST00000311916.6	protein_coding	100988026,100989644,100990436,100990869,100993190	100989453,100989884,100990543,100991010,100994401	Gene ID= ENSG00000107815.7 TPM= 11.58 Transcript Type= protein_coding
chr10	100997072	101007836	100997072	101007836	+	ENST00000370223.7@LZTS2	ENST00000370223.7	protein_coding	100997072,101002497,101003507,101005458,101006485	100997234,101002946,101004166,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 5.87 Transcript Type= protein_coding
chr10	100998296	101007836	100998296	101007836	+	transcript3489.chr10.nic@LZTS2	transcript3489.chr10.nic	protein_coding	100998296,101002497,101003507,101005458,101006485	100998410,101002946,101004166,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 6.83 Transcript Type= NA
chr10	100999302	101007836	100999302	101007836	+	transcript3492.chr10.nic@LZTS2	transcript3492.chr10.nic	protein_coding	100999302,101002497,101003507,101005458,101006485	100999952,101002946,101004166,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 54.13 Transcript Type= NA
chr10	100999779	101007836	100999779	101007836	+	transcript3493.chr10.nnic@LZTS2	transcript3493.chr10.nnic	protein_coding	100999779,101002497,101003691,101005458,101006485	100999952,101002946,101004166,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 4.59 Transcript Type= NA
chr10	101031234	101041244	101031234	101041244	+	ENST00000393459.5@SFXN3	ENST00000393459.5	protein_coding	101031234,101032314,101034692,101035497,101036003,101036486,101036723,101037076,101037382,101038643,101039175,101039489	101031534,101032482,101034855,101035667,101036101,101036561,101036808,101037203,101037431,101038692,101039222,101041244	Gene ID= ENSG00000107819.13 TPM= 2.41 Transcript Type= protein_coding
chr10	101032394	101041244	101032394	101041244	+	transcript3500.chr10.nic@SFXN3	transcript3500.chr10.nic	protein_coding	101032394,101034692,101035497,101036003,101036486,101036723,101037076,101037382,101039175,101039489	101032482,101034855,101035667,101036101,101036561,101036808,101037203,101038692,101039222,101041244	Gene ID= ENSG00000107819.13 TPM= 3.38 Transcript Type= NA
chr10	101061841	101065592	101061841	101065592	+	ENST00000370200.5@KAZALD1	ENST00000370200.5	protein_coding	101061841,101062542,101064261,101064501,101064826	101062115,101063103,101064421,101064648,101065592	Gene ID= ENSG00000107821.14 TPM= 1.93 Transcript Type= protein_coding
chr10	101226195	101230401	101226195	101230401	-	transcript3508.chr10.nnic@LBX1	transcript3508.chr10.nnic	protein_coding	101230163,101228491,101226195	101230401,101229203,101227790	Gene ID= ENSG00000138136.6 TPM= 39.58 Transcript Type= NA
chr10	101229550	101238849	101229550	101238849	+	transcript3505.chr10.nic@LBX1-AS1	transcript3505.chr10.nic	processed_transcript	101229550,101232254,101237939,101238231	101229814,101232434,101238047,101238849	Gene ID= ENSG00000227128.4 TPM= 5.79 Transcript Type= NA
chr10	101354063	101557321	101354063	101557321	+	ENST00000370187.7@BTRC	ENST00000370187.7	protein_coding	101354063,101430345,101461981,101479368,101521639,101526013,101531237,101532295,101532952,101534661,101535354,101536543,101538293,101550699,101553155	101354228,101430452,101462058,101479457,101521870,101526199,101531333,101532432,101533070,101534910,101535472,101536653,101538371,101550891,101557321	Gene ID= ENSG00000166167.17 TPM= 11.58 Transcript Type= protein_coding
chr10	101578884	101588270	101578884	101588270	-	ENST00000370162.7@POLL	ENST00000370162.7	protein_coding	101587822,101587246,101585862,101585316,101584602,101583508,101582763,101580248,101578884	101588270,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817	Gene ID= ENSG00000166169.16 TPM= 5.79 Transcript Type= protein_coding
chr10	101578882	101588269	101578882	101588269	-	transcript3530.chr10.nic@POLL	transcript3530.chr10.nic	protein_coding	101588204,101587246,101585862,101585316,101584602,101583508,101582763,101580248,101578882	101588269,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817	Gene ID= ENSG00000166169.16 TPM= 13.51 Transcript Type= NA
chr10	101578882	101588269	101578882	101588269	-	transcript3531.chr10.nic@POLL	transcript3531.chr10.nic	protein_coding	101588204,101587246,101585862,101585316,101584878,101583508,101582763,101580248,101578882	101588269,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817	Gene ID= ENSG00000166169.16 TPM= 8.69 Transcript Type= NA
chr10	101584482	101585366	101584482	101585366	-	transcript3540.chr10.nnic@NA	transcript3540.chr10.nnic	NA	101584482	101585366	Gene ID= novel_gene_chr10_3541 TPM= 1.93 Transcript Type= NA
chr10	101588288	101609668	101588288	101609668	+	ENST00000370151.8@DPCD	ENST00000370151.8	protein_coding	101588288,101594658,101600738,101601203,101608835,101609367	101588400,101594738,101600862,101601336,101608937,101609668	Gene ID= ENSG00000166171.12 TPM= 6.76 Transcript Type= protein_coding
chr10	101610666	101695259	101610666	101695259	-	ENST00000331272.7@FBXW4	ENST00000331272.7	protein_coding	101694381,101676341,101673488,101672915,101667886,101624745,101612337,101611628,101610666	101695259,101676436,101673673,101673047,101667980,101624810,101612477,101611769,101611410	Gene ID= ENSG00000107829.13 TPM= 45.37 Transcript Type= protein_coding
chr10	101781325	101783413	101781325	101783413	-	ENST00000370110.5@NPM3	ENST00000370110.5	protein_coding	101783273,101782839,101782478,101782258,101781727,101781325	101783413,101782924,101782597,101782351,101781854,101781632	Gene ID= ENSG00000107833.10 TPM= 2.9 Transcript Type= protein_coding
chr10	101784443	101818418	101784443	101818418	-	ENST00000361464.7@MGEA5	ENST00000361464.7	protein_coding	101817824,101813555,101813030,101810184,101807730,101806045,101803735,101800242,101798842,101797980,101793913,101792839,101791354,101790896,101787364,101784443	101818418,101813606,101813127,101810314,101807901,101806143,101804019,101800400,101799455,101798154,101793998,101792943,101791439,101791088,101787523,101786587	Gene ID= ENSG00000198408.13 TPM= 23.17 Transcript Type= protein_coding
chr10	101846433	102056157	101846433	102056157	-	transcript3560.chr10.nnic@C10orf76	transcript3560.chr10.nnic	protein_coding	102056085,102040013,102033283,102033026,102029638,102025156,102023675,102023477,102013968,102012833,102011723,102009977,102009374,102006540,102004366,102001971,101995297,101993538,101991969,101990551,101975212,101957650,101956597,101939863,101889412,101849776,101846433	102056157,102040125,102033339,102033172,102029745,102025248,102023749,102023563,102014024,102012876,102011783,102010023,102009449,102006633,102004483,102002072,101995355,101993603,101992038,101990611,101975300,101957732,101956723,101939938,101889490,101849892,101847620	Gene ID= ENSG00000120029.12 TPM= 1.93 Transcript Type= NA
chr10	101846433	102056254	101846433	102056254	-	transcript3563.chr10.nic@C10orf76	transcript3563.chr10.nic	protein_coding	102056085,102040013,102033283,102033026,102029638,102025156,102023675,102023477,102013968,102012833,102011723,102009977,102009374,102006540,102001971,101995297,101991969,101990551,101975212,101957650,101956597,101939863,101889412,101849776,101846433	102056254,102040125,102033339,102033172,102029745,102025248,102023749,102023563,102014024,102012876,102011783,102010023,102009449,102006633,102002072,101995355,101992038,101990611,101975300,101957732,101956723,101939938,101889490,101849892,101847620	Gene ID= ENSG00000120029.12 TPM= 1.93 Transcript Type= NA
chr10	101845599	101939988	101845599	101939988	-	transcript3568.chr10.nic@C10orf76	transcript3568.chr10.nic	protein_coding	101939863,101889412,101849776,101845599	101939988,101889490,101849892,101847620	Gene ID= ENSG00000120029.12 TPM= 6.76 Transcript Type= NA
chr10	101845599	102056193	101845599	102056193	-	ENST00000370033.8@C10orf76	ENST00000370033.8	protein_coding	102056085,102040013,102033283,102033026,102029638,102025156,102023675,102023477,102013968,102012833,102011723,102009977,102009374,102006540,102001971,101995297,101993538,101991969,101990551,101975212,101957650,101956597,101939863,101889412,101849776,101845599	102056193,102040125,102033339,102033172,102029745,102025248,102023749,102023563,102014024,102012876,102011783,102010023,102009449,102006633,102002072,101995355,101993603,101992038,101990611,101975300,101957732,101956723,101939938,101889490,101849892,101847620	Gene ID= ENSG00000120029.12 TPM= 6.76 Transcript Type= protein_coding
chr10	101877233	101879456	101877233	101879456	+	transcript3571.chr10.nnic@NA	transcript3571.chr10.nnic	NA	101877233	101879456	Gene ID= novel_gene_chr10_3572 TPM= 1.93 Transcript Type= NA
chr10	102065390	102068038	102065390	102068038	+	ENST00000299238.6@HPS6	ENST00000299238.6	protein_coding	102065390	102068038	Gene ID= ENSG00000166189.7 TPM= 80.12 Transcript Type= protein_coding
chr10	102107560	102120440	102107560	102120440	-	transcript3582.chr10.nic@LDB1	transcript3582.chr10.nic	protein_coding	102120086,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102107560	102120440,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177	Gene ID= ENSG00000198728.10 TPM= 6.76 Transcript Type= NA
chr10	102107583	102120453	102107583	102120453	-	ENST00000425280.1@LDB1	ENST00000425280.1	protein_coding	102120086,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102109029,102107583	102120453,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177,102108323	Gene ID= ENSG00000198728.10 TPM= 8.69 Transcript Type= protein_coding
chr10	102133030	102150325	102133030	102150325	+	ENST00000278070.6@PPRC1	ENST00000278070.6	protein_coding	102133030,102137850,102138619,102138879,102139100,102143045,102144250,102145020,102146672,102148372,102148628,102148817,102149178,102149926	102133221,102138038,102138765,102138980,102142004,102143098,102144307,102145090,102147392,102148521,102148694,102148938,102149329,102150325	Gene ID= ENSG00000148840.10 TPM= 14.48 Transcript Type= protein_coding
chr10	102132994	102150331	102132994	102150331	+	ENST00000413464.6@PPRC1	ENST00000413464.6	protein_coding	102132994,102137850,102138619,102138879,102139100,102143045,102144250,102148372,102148628,102148817,102149178,102149926	102133221,102138038,102138765,102138980,102142004,102143098,102144307,102148521,102148694,102148938,102149329,102150331	Gene ID= ENSG00000148840.10 TPM= 17.38 Transcript Type= protein_coding
chr10	102152176	102163866	102152176	102163866	+	ENST00000605788.5@NOLC1	ENST00000605788.5	protein_coding	102152176,102157019,102157189,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111	102152530,102157074,102157328,102157555,102158214,102159308,102159568,102160024,102160343,102161093,102161662,102161925,102163866	Gene ID= ENSG00000166197.16 TPM= 58.4 Transcript Type= protein_coding
chr10	102152176	102163871	102152176	102163871	+	ENST00000405356.5@NOLC1	ENST00000405356.5	protein_coding	102152176,102157019,102157189,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111	102152530,102157074,102157328,102157555,102158214,102159338,102159568,102160024,102160343,102161093,102161662,102161925,102163871	Gene ID= ENSG00000166197.16 TPM= 15.93 Transcript Type= protein_coding
chr10	102230186	102241474	102230186	102241474	-	ENST00000370002.7@PITX3	ENST00000370002.7	protein_coding	102241333,102231963,102231588,102230186	102241474,102232092,102231790,102231101	Gene ID= ENSG00000107859.9 TPM= 16.41 Transcript Type= protein_coding
chr10	102245532	102382899	102245532	102382899	+	ENST00000369983.3@GBF1	ENST00000369983.3	protein_coding	102245532,102258929,102260050,102344051,102351256,102351843,102352458,102353600,102358039,102358506,102359270,102360184,102361022,102361718,102362475,102363256,102363710,102365397,102366383,102367085,102367478,102368218,102368739,102369211,102369711,102369861,102370174,102370384,102370707,102375359,102376272,102376560,102376935,102379284,102379521,102379853,102380249,102380506,102381127,102382056	102245781,102259034,102260116,102344182,102351374,102351951,102352518,102353654,102358186,102358729,102359435,102360395,102361120,102361912,102362664,102363396,102363798,102365599,102366506,102367210,102367560,102368454,102368832,102369387,102369775,102369984,102370245,102370478,102370860,102375584,102376432,102376800,102377140,102379434,102379651,102379954,102380362,102380686,102381255,102382899	Gene ID= ENSG00000107862.4 TPM= 52.13 Transcript Type= protein_coding
chr10	102394110	102402529	102394110	102402529	+	ENST00000428099.5@NFKB2	ENST00000428099.5	protein_coding	102394110,102395888,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402255	102394600,102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402529	Gene ID= ENSG00000077150.18 TPM= 10.62 Transcript Type= protein_coding
chr10	102395706	102402524	102395706	102402524	+	ENST00000189444.10@NFKB2	ENST00000189444.10	protein_coding	102395706,102395888,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402255	102395796,102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402524	Gene ID= ENSG00000077150.18 TPM= 8.69 Transcript Type= protein_coding
chr10	102420812	102423136	102420812	102423136	+	transcript3613.chr10.nic@FBXL15	transcript3613.chr10.nic	protein_coding	102420812,102421052,102421354,102421787,102422804	102420957,102421182,102421507,102422292,102423136	Gene ID= ENSG00000107872.12 TPM= 9.97 Transcript Type= NA
chr10	102421181	102423136	102421181	102423136	+	transcript3616.chr10.nic@FBXL15	transcript3616.chr10.nic	protein_coding	102421181,102421787,102422804	102421507,102422292,102423136	Gene ID= ENSG00000107872.12 TPM= 17.69 Transcript Type= NA
chr10	102421188	102423136	102421188	102423136	+	transcript3617.chr10.nic@FBXL15	transcript3617.chr10.nic	protein_coding	102421188,102422804	102422292,102423136	Gene ID= ENSG00000107872.12 TPM= 12.87 Transcript Type= NA
chr10	102423245	102432661	102423245	102432661	-	ENST00000369937.4@CUEDC2	ENST00000369937.4	protein_coding	102432526,102425115,102424649,102424499,102424264,102423996,102423798,102423657,102423245	102432661,102425198,102424792,102424560,102424394,102424178,102423859,102423717,102423572	Gene ID= ENSG00000107874.10 TPM= 124.04 Transcript Type= protein_coding
chr10	102479229	102502711	102479229	102502711	-	ENST00000369905.8@ACTR1A	ENST00000369905.8	protein_coding	102502600,102490549,102489063,102488150,102485609,102484160,102483011,102482001,102481837,102481132,102479229	102502711,102490613,102489138,102488275,102485733,102484376,102483103,102482175,102481898,102481172,102480965	Gene ID= ENSG00000138107.12 TPM= 369.71 Transcript Type= protein_coding
chr10	102479237	102502678	102479237	102502678	-	ENST00000487599.1@ACTR1A	ENST00000487599.1	protein_coding	102502600,102490549,102489063,102488150,102485609,102484160,102483011,102482001,102481132,102479237	102502678,102490613,102489138,102488275,102485733,102484376,102483103,102482175,102481172,102480965	Gene ID= ENSG00000138107.12 TPM= 8.69 Transcript Type= protein_coding
chr10	102503969	102513120	102503969	102513120	+	transcript3642.chr10.nnic@SUFU	transcript3642.chr10.nnic	protein_coding	102503969,102509169,102512100	102504334,102509303,102513120	Gene ID= ENSG00000107882.11 TPM= 2.9 Transcript Type= NA
chr10	102631768	102633452	102631768	102633452	+	transcript3643.chr10.nnic@NA	transcript3643.chr10.nnic	NA	102631768	102633452	Gene ID= novel_gene_chr10_3644 TPM= 3.86 Transcript Type= NA
chr10	102642360	102643360	102642360	102643360	+	transcript3648.chr10.nnic@NA	transcript3648.chr10.nnic	NA	102642360	102643360	Gene ID= novel_gene_chr10_3649 TPM= 9.65 Transcript Type= NA
chr10	102743970	102816240	102743970	102816240	+	ENST00000448841.5@WBP1L	ENST00000448841.5	protein_coding	102743970,102797993,102809893,102812595	102744143,102798095,102810054,102816240	Gene ID= ENSG00000166272.16 TPM= 9.17 Transcript Type= protein_coding
chr10	102776249	102816267	102776249	102816267	+	ENST00000369889.5@WBP1L	ENST00000369889.5	protein_coding	102776249,102797993,102809893,102812595	102776417,102798095,102810054,102816267	Gene ID= ENSG00000166272.16 TPM= 34.27 Transcript Type= protein_coding
chr10	102854223	102864961	102854223	102864961	+	ENST00000339834.9@BORCS7	ENST00000339834.9	protein_coding	102854223,102860332,102860498,102862160,102862873	102854427,102860394,102860541,102862180,102864961	Gene ID= ENSG00000166275.15 TPM= 2.9 Transcript Type= protein_coding
chr10	102918549	102927614	102918549	102927614	+	transcript3676.chr10.nnic@CNNM2	transcript3676.chr10.nnic	protein_coding	102918549,102925598,102927345	102920101,102925685,102927614	Gene ID= ENSG00000148842.17 TPM= 1.93 Transcript Type= NA
chr10	103088156	103193313	103088156	103193313	-	transcript3688.chr10.nnic@NT5C2	transcript3688.chr10.nnic	protein_coding	103193236,103181231,103139406,103111745,103106589,103105706,103105358,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088156	103193313,103181328,103139479,103111805,103106706,103105801,103105381,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 4.51 Transcript Type= NA
chr10	103088156	103193311	103088156	103193311	-	transcript3693.chr10.nic@NT5C2	transcript3693.chr10.nic	protein_coding	103193236,103174858,103139406,103106589,103105706,103105358,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088156	103193311,103174982,103139479,103106706,103105801,103105381,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 4.51 Transcript Type= NA
chr10	103088156	103193313	103088156	103193313	-	transcript3695.chr10.nnic@NT5C2	transcript3695.chr10.nnic	protein_coding	103193236,103181185,103174858,103139406,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088156	103193313,103181328,103174982,103139479,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 5.47 Transcript Type= NA
chr10	103133170	103135498	103133170	103135498	+	transcript3704.chr10.nnic@NA	transcript3704.chr10.nnic	NA	103133170	103135498	Gene ID= novel_gene_chr10_3705 TPM= 8.69 Transcript Type= NA
chr10	103191959	103193233	103191959	103193233	-	transcript3712.chr10.nnic@NA	transcript3712.chr10.nnic	NA	103191959	103193233	Gene ID= novel_gene_chr10_3713 TPM= 1.93 Transcript Type= NA
chr10	103302796	103351151	103302796	103351151	-	transcript3717.chr10.nnic@PCGF6	transcript3717.chr10.nnic	protein_coding	103350707,103348900,103348716,103345024,103333925,103326534,103314186,103302796	103351151,103348999,103348812,103345132,103333952,103326632,103314272,103303961	Gene ID= ENSG00000156374.14 TPM= 1.93 Transcript Type= NA
chr10	103302796	103351134	103302796	103351134	-	ENST00000369847.3@PCGF6	ENST00000369847.3	protein_coding	103350707,103348900,103348716,103347395,103347238,103345024,103333925,103326534,103314186,103302796	103351134,103348999,103348812,103347450,103347297,103345132,103333952,103326632,103314272,103303961	Gene ID= ENSG00000156374.14 TPM= 48.27 Transcript Type= protein_coding
chr10	103367967	103389065	103367967	103389065	+	ENST00000369839.3@TAF5	ENST00000369839.3	protein_coding	103367967,103373358,103378235,103379608,103379884,103381721,103383238,103385326,103387175,103387521,103388006	103368548,103373595,103378550,103379771,103380019,103381841,103383367,103385490,103387352,103387698,103389065	Gene ID= ENSG00000148835.10 TPM= 8.69 Transcript Type= protein_coding
chr10	103367963	103375140	103367963	103375140	+	transcript3735.chr10.nic@TAF5	transcript3735.chr10.nic	protein_coding	103367963,103373358	103368548,103375140	Gene ID= ENSG00000148835.10 TPM= 1.93 Transcript Type= NA
chr10	103389050	103396466	103389050	103396466	-	ENST00000309579.7@USMG5	ENST00000309579.7	protein_coding	103396409,103392371,103392191,103389050	103396466,103392466,103392283,103389166	Gene ID= ENSG00000173915.14 TPM= 350.65 Transcript Type= protein_coding
chr10	103389050	103396441	103389050	103396441	-	ENST00000369815.5@USMG5	ENST00000369815.5	protein_coding	103396409,103395746,103392371,103392191,103389050	103396441,103396032,103392466,103392283,103389166	Gene ID= ENSG00000173915.14 TPM= 24.37 Transcript Type= protein_coding
chr10	103389050	103396466	103389050	103396466	-	ENST00000337003.4@USMG5	ENST00000337003.4	protein_coding	103396409,103394199,103392371,103392191,103389050	103396466,103394394,103392466,103392283,103389166	Gene ID= ENSG00000173915.14 TPM= 9.89 Transcript Type= protein_coding
chr10	103396635	103440431	103396635	103440431	+	transcript3737.chr10.nic@PDCD11	transcript3737.chr10.nic	protein_coding	103396635,103398416,103400397,103403118,103405022,103405985,103406609,103409699,103413116,103413966,103414270,103415005,103416491,103417792,103418440,103419538,103421348,103422988,103423543,103424984,103427329,103432129,103433948,103434248,103434798,103438015,103438686,103439746,103440290	103396730,103398528,103400528,103403285,103405183,103406108,103406790,103409806,103413322,103414090,103414330,103415151,103416742,103417932,103418634,103419708,103421567,103423137,103423658,103425525,103427391,103432234,103434037,103434350,103434975,103438071,103438808,103439868,103440431	Gene ID= ENSG00000148843.13 TPM= 7.72 Transcript Type= NA
chr10	103396648	103446292	103396648	103446292	+	ENST00000369797.7@PDCD11	ENST00000369797.7	protein_coding	103396648,103398416,103400397,103403118,103405022,103405985,103406609,103409699,103413116,103413966,103414270,103415005,103416491,103417792,103418440,103419538,103421348,103422988,103423543,103424984,103427329,103432129,103433948,103434248,103434798,103438015,103438686,103439746,103440290,103440734,103441826,103442213,103443165,103443915,103444517,103445378	103396730,103398528,103400528,103403285,103405183,103406108,103406790,103409806,103413322,103414090,103414330,103415151,103416742,103417932,103418634,103419708,103421567,103423137,103423658,103425525,103427391,103432234,103434037,103434350,103434975,103438071,103438808,103439868,103440581,103440850,103441975,103442460,103443333,103444068,103444682,103446292	Gene ID= ENSG00000148843.13 TPM= 40.54 Transcript Type= protein_coding
chr10	103446786	103452402	103446786	103452402	-	ENST00000369788.7@CALHM2	ENST00000369788.7	protein_coding	103452156,103451083,103449387,103446786	103452402,103451182,103450099,103447568	Gene ID= ENSG00000138172.10 TPM= 10.62 Transcript Type= protein_coding
chr10	103555103	103592552	103555103	103592552	+	transcript3750.chr10.nic@NEURL1	transcript3750.chr10.nic	protein_coding	103555103,103570872,103571501,103584536,103589514,103590134	103555413,103571113,103571822,103585225,103589660,103592552	Gene ID= ENSG00000107954.10 TPM= 42.47 Transcript Type= NA
chr10	103590669	103596443	103590669	103596443	+	transcript3754.chr10.nnic@NA	transcript3754.chr10.nnic	NA	103590669	103596443	Gene ID= novel_gene_chr10_3755 TPM= 3.86 Transcript Type= NA
chr10	103877567	103879098	103877567	103879098	-	transcript3776.chr10.nnic@NA	transcript3776.chr10.nnic	NA	103877567	103879098	Gene ID= novel_gene_chr10_3777 TPM= 1.93 Transcript Type= NA
chr10	103882542	103918205	103882542	103918205	-	ENST00000224950.7@STN1	ENST00000224950.7	protein_coding	103918100,103917462,103910527,103905091,103900062,103898877,103897548,103892130,103889072,103882542	103918205,103917656,103910622,103905156,103900223,103899000,103897719,103892252,103889144,103882841	Gene ID= ENSG00000107960.10 TPM= 21.24 Transcript Type= protein_coding
chr10	103967104	104003528	103967104	104003528	+	transcript3794.chr10.nic@SLK	transcript3794.chr10.nic	protein_coding	103967104,103990675,103992598,103992984,103998899,103999119,103999867,104001444,104002172	103967895,103990839,103992646,103993133,103998971,103999313,103999948,104001572,104003528	Gene ID= ENSG00000065613.13 TPM= 47.3 Transcript Type= NA
chr10	103967201	104029233	103967201	104029233	+	ENST00000335753.8@SLK	ENST00000335753.8	protein_coding	103967201,103990675,103992598,103992984,103998899,103999119,103999867,104001444,104002172,104005561,104005912,104008177,104018160,104018784,104019734,104020488,104021620,104025574	103967895,103990839,103992646,103993133,103998971,103999313,103999948,104001572,104003527,104005691,104006035,104008356,104018289,104018908,104019922,104020613,104021733,104029233	Gene ID= ENSG00000065613.13 TPM= 5.79 Transcript Type= protein_coding
chr10	104122165	104126385	104122165	104126385	+	ENST00000369727.3@SFR1	ENST00000369727.3	protein_coding	104122165,104122965,104123714,104125513	104122196,104123086,104124124,104126385	Gene ID= ENSG00000156384.14 TPM= 3.86 Transcript Type= protein_coding
chr10	104254735	104267457	104254735	104267457	+	ENST00000369713.9@GSTO1	ENST00000369713.9	protein_coding	104254735,104255163,104259576,104262979,104266084,104267252	104254962,104255271,104259798,104263077,104266190,104267457	Gene ID= ENSG00000148834.12 TPM= 79.16 Transcript Type= protein_coding
chr10	104254710	104267459	104254710	104267459	+	ENST00000369710.8@GSTO1	ENST00000369710.8	protein_coding	104254710,104255163,104259576,104266084,104267252	104254962,104255271,104259798,104266190,104267459	Gene ID= ENSG00000148834.12 TPM= 9.65 Transcript Type= protein_coding
chr10	104312131	104338404	104312131	104338404	-	ENST00000337478.2@ITPRIP	ENST00000337478.2	protein_coding	104338246,104312131	104338404,104316064	Gene ID= ENSG00000148841.15 TPM= 16.41 Transcript Type= protein_coding
chr10	109864768	109923509	109864768	109923509	-	transcript3815.chr10.nnic@XPNPEP1	transcript3815.chr10.nnic	protein_coding	109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109867529,109864768	109923509,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109867586,109865312	Gene ID= ENSG00000108039.17 TPM= 6.76 Transcript Type= NA
chr10	109864766	109923553	109864766	109923553	-	ENST00000502935.5@XPNPEP1	ENST00000502935.5	protein_coding	109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109864766	109923553,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 57.44 Transcript Type= protein_coding
chr10	109864766	109923553	109864766	109923553	-	ENST00000322238.12@XPNPEP1	ENST00000322238.12	protein_coding	109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109873367,109871792,109870731,109869953,109868614,109864766	109923553,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 7.24 Transcript Type= protein_coding
chr10	110225964	110286506	110225964	110286506	+	transcript3827.chr10.nic@MXI1	transcript3827.chr10.nic	protein_coding	110225964,110228189,110244828,110245743,110279180,110279914,110284824	110226283,110228321,110244857,110245818,110279294,110280085,110286506	Gene ID= ENSG00000119950.20 TPM= 1.93 Transcript Type= NA
chr10	110227312	110286635	110227312	110286635	+	transcript3832.chr10.nnic@MXI1	transcript3832.chr10.nnic	protein_coding	110227312,110228189,110244828,110279180,110279914,110284824	110227337,110228321,110244857,110279294,110280085,110286635	Gene ID= ENSG00000119950.20 TPM= 1.93 Transcript Type= NA
chr10	110225993	110286506	110225993	110286506	+	ENST00000239007.11@MXI1	ENST00000239007.11	protein_coding	110225993,110228189,110244828,110279180,110279914,110284824	110226283,110228321,110244857,110279294,110280085,110286506	Gene ID= ENSG00000119950.20 TPM= 20.27 Transcript Type= protein_coding
chr10	110293044	110304974	110293044	110304974	-	transcript3836.chr10.nnic@SMNDC1	transcript3836.chr10.nnic	protein_coding	110304748,110303468,110300547,110298648,110297567,110295228,110293044	110304974,110303587,110300736,110298790,110297728,110295381,110294287	Gene ID= ENSG00000119953.12 TPM= 2.9 Transcript Type= NA
chr10	110290730	110304951	110290730	110304951	-	ENST00000369603.9@SMNDC1	ENST00000369603.9	protein_coding	110304748,110303468,110298648,110297567,110295228,110290730	110304951,110303587,110298790,110297728,110295381,110294287	Gene ID= ENSG00000119953.12 TPM= 2.9 Transcript Type= protein_coding
chr10	110497838	110511544	110497838	110511544	+	ENST00000369583.3@DUSP5	ENST00000369583.3	protein_coding	110497838,110502721,110506935,110510020	110498500,110502869,110507154,110511544	Gene ID= ENSG00000138166.5 TPM= 1.93 Transcript Type= protein_coding
chr10	110567677	110604636	110567677	110604636	+	transcript3845.chr10.nnic@SMC3	transcript3845.chr10.nnic	protein_coding	110567677,110568938,110575336,110577421,110577835,110578628,110580904,110581923,110582562,110583384,110583841,110584183,110589605,110589892,110590412,110590991,110593073,110596398,110598139,110599654,110600439,110601022,110601637,110601966,110602474,110602825,110603184,110604231	110567831,110569013,110575403,110577492,110577914,110578706,110581021,110582098,110582642,110583548,110583962,110584396,110589708,110589991,110590572,110591132,110593223,110596550,110598290,110599812,110600546,110601130,110601884,110602178,110602665,110603002,110603290,110604636	Gene ID= ENSG00000108055.9 TPM= 1.93 Transcript Type= NA
chr10	110567677	110589678	110567677	110589678	+	transcript3848.chr10.nic@SMC3	transcript3848.chr10.nic	protein_coding	110567677,110568938,110573707,110575336,110577421,110577835,110578628,110580904,110581923,110582562,110583384,110583841,110584183,110589605	110567831,110569013,110573745,110575403,110577492,110577914,110578706,110581021,110582098,110582642,110583548,110583962,110584396,110589678	Gene ID= ENSG00000108055.9 TPM= 6.76 Transcript Type= NA
chr10	110567691	110604636	110567691	110604636	+	ENST00000361804.4@SMC3	ENST00000361804.4	protein_coding	110567691,110568938,110573707,110575336,110577421,110577835,110578628,110580904,110581923,110582562,110583384,110583841,110584183,110589605,110589892,110590412,110590991,110593073,110596398,110598139,110599654,110600439,110601022,110601637,110601966,110602474,110602825,110603184,110604231	110567831,110569013,110573745,110575403,110577492,110577914,110578706,110581021,110582098,110582642,110583548,110583962,110584396,110589708,110589991,110590572,110591132,110593223,110596550,110598290,110599812,110600546,110601130,110601884,110602178,110602665,110603002,110603290,110604636	Gene ID= ENSG00000108055.9 TPM= 14.48 Transcript Type= protein_coding
chr10	110667181	110671404	110667181	110671404	+	transcript3864.chr10.nnic@RBM20	transcript3864.chr10.nnic	protein_coding	110667181,110669130,110670333	110667478,110669201,110671404	Gene ID= ENSG00000203867.7 TPM= 1.93 Transcript Type= NA
chr10	110644397	110839469	110644397	110839469	+	ENST00000369519.3@RBM20	ENST00000369519.3	protein_coding	110644397,110780801,110783366,110784341,110784792,110797508,110799787,110810383,110812278,110820072,110821275,110823480,110831061,110835868	110644645,110781884,110783427,110784432,110784889,110797648,110799918,110810462,110812947,110820176,110821935,110823614,110831182,110839469	Gene ID= ENSG00000203867.7 TPM= 53.09 Transcript Type= protein_coding
chr10	110871807	110900006	110871807	110900006	+	ENST00000280154.11@PDCD4	ENST00000280154.11	protein_coding	110871807,110875966,110881233,110883003,110885253,110887665,110889533,110890556,110894091,110894412,110895948,110898028	110872018,110876070,110881535,110883097,110885366,110887886,110889630,110890670,110894198,110894522,110896087,110900006	Gene ID= ENSG00000150593.17 TPM= 1.93 Transcript Type= protein_coding
chr10	110898730	110919274	110898730	110919274	-	ENST00000448814.5@BBIP1	ENST00000448814.5	protein_coding	110919121,110918121,110901538,110898730	110919274,110918213,110901612,110900526	Gene ID= ENSG00000214413.7 TPM= 11.58 Transcript Type= protein_coding
chr10	110919547	111013667	110919547	111013667	+	ENST00000369452.8@SHOC2	ENST00000369452.8	protein_coding	110919547,110964125,110985628,111000415,111004606,111007531,111009248,111009713,111011610	110919657,110965061,110985765,111000545,111004794,111007653,111009385,111009830,111013667	Gene ID= ENSG00000108061.11 TPM= 41.03 Transcript Type= protein_coding
chr10	110919586	111013664	110919586	111013664	+	transcript3869.chr10.nnic@SHOC2	transcript3869.chr10.nnic	protein_coding	110919586,110985628,111000415,111004606,111007531,111009248,111009713,111011610	110919657,110985765,111000545,111004794,111007653,111009385,111009830,111013664	Gene ID= ENSG00000108061.11 TPM= 5.31 Transcript Type= NA
chr10	112149864	112183763	112149864	112183763	-	ENST00000348367.8@GPAM	ENST00000348367.8	protein_coding	112183693,112182794,112181683,112180473,112177984,112175600,112173699,112172970,112172182,112168853,112168312,112166402,112164525,112163701,112161667,112160604,112159911,112158316,112157249,112155864,112154629,112149864	112183763,112182891,112181813,112180595,112178057,112175713,112173845,112173066,112172318,112168952,112168524,112166515,112164610,112163816,112161737,112160868,112160053,112158393,112157389,112156053,112154687,112153666	Gene ID= ENSG00000119927.13 TPM= 2.9 Transcript Type= protein_coding
chr10	112376198	112428379	112376198	112428379	+	ENST00000433418.5@ACSL5	ENST00000433418.5	protein_coding	112376198,112394918,112398901,112404511,112404705,112408422,112409507,112410463,112410584,112411456,112411902,112413173,112416888,112417846,112421593,112421947,112422325,112425338,112426258,112427218	112376448,112395102,112399009,112404575,112404806,112408521,112409685,112410495,112410635,112411529,112411979,112413307,112417022,112417941,112421665,112422035,112422441,112425481,112426359,112428379	Gene ID= ENSG00000197142.10 TPM= 1.93 Transcript Type= protein_coding
chr10	112376227	112426554	112376227	112426554	+	transcript3879.chr10.nic@ACSL5	transcript3879.chr10.nic	protein_coding	112376227,112394918,112398901,112404511,112404705,112408422,112409507,112410463,112410584,112411456,112411902,112413173,112416888,112417846,112421593,112421947,112422325,112425338,112426258	112376448,112395102,112399009,112404575,112404806,112408521,112409685,112410495,112410635,112411529,112411979,112413307,112417022,112417941,112421665,112422035,112422441,112425481,112426554	Gene ID= ENSG00000197142.10 TPM= 1.93 Transcript Type= NA
chr10	112430300	112446753	112430300	112446753	-	transcript3882.chr10.nic@ZDHHC6	transcript3882.chr10.nic	protein_coding	112446587,112445170,112443515,112442192,112440534,112438336,112434297,112433240,112432376,112432240,112430300	112446753,112445650,112443606,112442351,112440695,112438389,112434464,112433281,112432521,112432286,112430907	Gene ID= ENSG00000023041.11 TPM= 2.9 Transcript Type= NA
chr10	112430300	112446914	112430300	112446914	-	ENST00000369405.7@ZDHHC6	ENST00000369405.7	protein_coding	112446705,112445170,112443515,112442192,112440534,112438336,112434297,112433240,112432376,112432240,112430300	112446914,112445650,112443606,112442351,112440695,112438389,112434464,112433281,112432521,112432286,112430907	Gene ID= ENSG00000023041.11 TPM= 20.27 Transcript Type= protein_coding
chr10	112446998	112450726	112446998	112450726	+	ENST00000483122.1@VTI1A	ENST00000483122.1	protein_coding	112446998,112448382,112448882	112447467,112448489,112450726	Gene ID= ENSG00000151532.13 TPM= 2.9 Transcript Type= processed_transcript
chr10	112823490	112827726	112823490	112827726	+	ENST00000564352.1@AL158212.3	ENST00000564352.1	sense_overlapping	112823490	112827726	Gene ID= ENSG00000260917.1 TPM= 5.79 Transcript Type= sense_overlapping
chr10	112950250	113167678	112950250	113167678	+	ENST00000355995.8@TCF7L2	ENST00000355995.8	protein_coding	112950250,112951207,112951483,112964556,113040025,113141184,113143923,113146011,113150998,113151725,113152333,113158021,113158667,113159920,113165555	112950945,112951273,112951607,112964624,113040126,113141316,113144025,113146097,113151123,113151884,113152440,113158069,113158717,113159992,113167678	Gene ID= ENSG00000148737.16 TPM= 6.76 Transcript Type= protein_coding
chr10	112950250	113167678	112950250	113167678	+	ENST00000536810.5@TCF7L2	ENST00000536810.5	protein_coding	112950250,112951207,112951483,113040025,113141184,113143923,113146011,113150998,113151725,113152333,113158021,113159920,113165555	112950945,112951273,112951607,113040126,113141316,113144025,113146097,113151123,113151884,113152440,113158069,113159992,113167678	Gene ID= ENSG00000148737.16 TPM= 6.76 Transcript Type= protein_coding
chr10	113588825	113664070	113588825	113664070	-	ENST00000360478.7@NRAP	ENST00000360478.7	protein_coding	113663811,113663352,113662679,113657470,113654021,113652935,113651803,113650438,113650037,113646923,113645825,113641365,113640227,113634112,113633084,113631857,113631509,113629588,113628917,113626047,113624826,113623529,113621869,113620604,113617455,113615712,113614839,113614183,113612234,113610459,113608414,113606178,113605762,113604609,113597969,113597086,113595623,113592194,113590578,113589666,113588825	113664070,113663446,113662766,113657574,113654125,113653039,113651907,113650545,113650141,113647027,113645941,113641472,113640331,113634210,113633188,113631964,113631610,113629785,113629021,113626145,113624930,113623636,113622180,113620708,113617553,113615816,113614946,113614296,113612431,113610563,113608512,113606282,113605869,113604920,113598073,113597184,113595727,113592301,113590889,113589797,113589079	Gene ID= ENSG00000197893.13 TPM= 470.95 Transcript Type= protein_coding
chr10	113588833	113664127	113588833	113664127	-	ENST00000359988.3@NRAP	ENST00000359988.3	protein_coding	113663811,113663352,113662679,113657470,113654021,113652935,113651803,113650438,113650037,113646923,113645825,113642934,113641365,113640227,113634112,113633084,113631857,113631509,113629588,113628917,113626047,113624826,113623529,113621869,113620604,113617455,113615712,113614839,113614183,113612234,113610459,113608414,113606178,113605762,113604609,113597969,113597086,113595623,113592194,113590578,113589666,113588833	113664127,113663446,113662766,113657574,113654125,113653039,113651907,113650545,113650141,113647027,113645941,113643038,113641472,113640331,113634210,113633188,113631964,113631610,113629785,113629021,113626145,113624930,113623636,113622180,113620708,113617553,113615816,113614946,113614296,113612431,113610563,113608512,113606282,113605869,113604920,113598073,113597184,113595727,113592301,113590889,113589797,113589079	Gene ID= ENSG00000197893.13 TPM= 437.13 Transcript Type= protein_coding
chr10	113643363	113644167	113643363	113644167	+	transcript3975.chr10.nnic@NA	transcript3975.chr10.nnic	NA	113643363	113644167	Gene ID= novel_gene_chr10_3976 TPM= 17.38 Transcript Type= NA
chr10	113679162	113730907	113679162	113730907	+	ENST00000621345.4@CASP7	ENST00000621345.4	protein_coding	113679162,113697494,113721032,113721651,113725362,113726305,113729311	113679349,113697603,113721168,113721779,113725537,113726434,113730907	Gene ID= ENSG00000165806.19 TPM= 4.34 Transcript Type= protein_coding
chr10	113679877	113730903	113679877	113730903	+	ENST00000369318.7@CASP7	ENST00000369318.7	protein_coding	113679877,113697494,113721032,113721651,113725362,113726305,113729311	113679978,113697603,113721168,113721779,113725537,113726434,113730903	Gene ID= ENSG00000165806.19 TPM= 7.24 Transcript Type= protein_coding
chr10	113834729	113854383	113834729	113854383	-	ENST00000369305.1@DCLRE1A	ENST00000369305.1	protein_coding	113854354,113852723,113848980,113847202,113845685,113844104,113842343,113841406,113837062,113834729	113854383,113853847,113850644,113847335,113845803,113844244,113842488,113841560,113837203,113835312	Gene ID= ENSG00000198924.7 TPM= 1.93 Transcript Type= protein_coding
chr10	113834725	113854100	113834725	113854100	-	ENST00000361384.6@DCLRE1A	ENST00000361384.6	protein_coding	113852723,113848980,113847202,113845685,113844104,113842343,113841406,113837062,113834725	113854100,113850644,113847335,113845803,113844244,113842488,113841560,113837203,113835312	Gene ID= ENSG00000198924.7 TPM= 2.9 Transcript Type= protein_coding
chr10	113854661	113917194	113854661	113917194	+	ENST00000369301.3@NHLRC2	ENST00000369301.3	protein_coding	113854661,113858528,113876521,113879574,113884251,113898110,113901666,113902471,113903527,113904817,113908280	113855050,113858680,113876976,113879695,113884380,113898209,113901897,113902593,113903736,113905036,113917194	Gene ID= ENSG00000196865.4 TPM= 19.31 Transcript Type= protein_coding
chr10	114294824	114404485	114294824	114404485	-	ENST00000304129.8@AFAP1L2	ENST00000304129.8	protein_coding	114404440,114340603,114333221,114331803,114323171,114315560,114313871,114310354,114308433,114307805,114304719,114302339,114301354,114300445,114300194,114299260,114297220,114296978,114294824	114404485,114340731,114333295,114331897,114323261,114315765,114314050,114310443,114308517,114307909,114304930,114302484,114301465,114300690,114300362,114299415,114297413,114297100,114296068	Gene ID= ENSG00000169129.14 TPM= 3.86 Transcript Type= protein_coding
chr10	114435365	114768323	114435365	114768323	-	transcript3995.chr10.nnic@ABLIM1	transcript3995.chr10.nnic	protein_coding	114768061,114601827,114575416,114571297,114547650,114545005,114491791,114487958,114473879,114472977,114468181,114465698,114451624,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114435365	114768323,114601961,114575599,114571406,114547776,114545098,114491878,114488016,114473956,114473132,114468216,114465827,114451671,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373	Gene ID= ENSG00000099204.18 TPM= 3.86 Transcript Type= NA
chr10	114435365	114526917	114435365	114526917	-	transcript4001.chr10.nnic@ABLIM1	transcript4001.chr10.nnic	protein_coding	114526660,114491791,114487958,114473879,114472977,114468181,114465698,114451624,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114435365	114526917,114491878,114488016,114473956,114473132,114468216,114465827,114451671,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373	Gene ID= ENSG00000099204.18 TPM= 2.9 Transcript Type= NA
chr10	114821701	114864712	114821701	114864712	+	transcript4003.chr10.nnic@FAM160B1	transcript4003.chr10.nnic	protein_coding	114821701,114830852,114833233,114835537,114836124,114842933,114843741,114845367,114846013,114846175,114846559,114847090,114848647,114855197,114860749,114861231,114863649,114864526	114822123,114830930,114833402,114835641,114836246,114843226,114843937,114845481,114846089,114846367,114846728,114847233,114848737,114855340,114860889,114861334,114863679,114864712	Gene ID= ENSG00000151553.14 TPM= 5.79 Transcript Type= NA
chr10	114821762	114863914	114821762	114863914	+	transcript4009.chr10.nic@FAM160B1	transcript4009.chr10.nic	protein_coding	114821762,114830852,114833233,114835537,114836124,114842933,114843741,114845367,114846013,114846175,114846559,114847090,114848647,114855197,114860749,114861231,114863649	114822123,114830930,114833402,114835641,114836246,114843226,114843937,114845481,114846089,114846367,114846728,114847233,114848737,114855340,114860889,114861334,114863914	Gene ID= ENSG00000151553.14 TPM= 2.9 Transcript Type= NA
chr10	114821744	114864717	114821744	114864717	+	ENST00000369248.8@FAM160B1	ENST00000369248.8	protein_coding	114821744,114830852,114833233,114835537,114836124,114842933,114843741,114845367,114846013,114846175,114846559,114847090,114848647,114855197,114860749,114861231,114861435	114822123,114830930,114833402,114835641,114836246,114843226,114843937,114845481,114846089,114846367,114846728,114847233,114848737,114855340,114860889,114861334,114864717	Gene ID= ENSG00000151553.14 TPM= 19.31 Transcript Type= protein_coding
chr10	114938193	114977676	114938193	114977676	+	ENST00000298746.4@TRUB1	ENST00000298746.4	protein_coding	114938193,114942645,114951094,114959726,114970368,114972135,114974329,114975123	114938539,114942743,114951149,114959807,114970440,114972274,114974385,114977676	Gene ID= ENSG00000165832.5 TPM= 8.69 Transcript Type= protein_coding
chr10	116671192	116742574	116671192	116742574	-	ENST00000369209.7@HSPA12A	ENST00000369209.7	protein_coding	116742430,116707200,116705151,116700943,116698635,116692351,116683791,116681791,116681152,116679503,116676399,116671192	116742574,116707285,116705278,116701129,116698739,116692467,116683962,116681877,116681256,116679761,116676502,116675418	Gene ID= ENSG00000165868.13 TPM= 7.72 Transcript Type= protein_coding
chr10	117267643	117375467	117267643	117375467	-	transcript4022.chr10.nnic@PDZD8	transcript4022.chr10.nnic	protein_coding	117374356,117340980,117318872,117290186,117267643	117375467,117341102,117318974,117290348,117270443	Gene ID= ENSG00000165650.11 TPM= 1.93 Transcript Type= NA
chr10	117277274	117375467	117277274	117375467	-	ENST00000334464.6@PDZD8	ENST00000334464.6	protein_coding	117374356,117340980,117318872,117290186,117277274	117375467,117341102,117318974,117290348,117285471	Gene ID= ENSG00000165650.11 TPM= 14.48 Transcript Type= protein_coding
chr10	117484295	117542495	117484295	117542495	-	ENST00000440007.5@EMX2OS	ENST00000440007.5	antisense_RNA	117542097,117492021,117484295	117542495,117492109,117490911	Gene ID= ENSG00000229847.8 TPM= 2.9 Transcript Type= antisense_RNA
chr10	118039196	118046941	118039196	118046941	-	transcript4038.chr10.nic@RAB11FIP2	transcript4038.chr10.nic	protein_coding	118045811,118040123,118039196	118046941,118040565,118039440	Gene ID= ENSG00000107560.10 TPM= 25.1 Transcript Type= NA
chr10	118335560	118342338	118335560	118342338	-	transcript4053.chr10.nic@FAM204A	transcript4053.chr10.nic	protein_coding	118342270,118341727,118336182,118335560	118342338,118341927,118336423,118335641	Gene ID= ENSG00000165669.13 TPM= 5.79 Transcript Type= NA
chr10	118684556	118755249	118684556	118755249	-	ENST00000493518.5@CACUL1	ENST00000493518.5	protein_coding	118754396,118730284,118729295,118707492,118701306,118695141,118693702,118691265,118686598,118684556	118755249,118730410,118729397,118707587,118701408,118695230,118693749,118691403,118686641,118686168	Gene ID= ENSG00000151893.14 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chr10	118676411	118755246	118676411	118755246	-	ENST00000369151.7@CACUL1	ENST00000369151.7	protein_coding	118754396,118730284,118729295,118707492,118701306,118695141,118691265,118686598,118676411	118755246,118730410,118729397,118707587,118701408,118695230,118691403,118686641,118686168	Gene ID= ENSG00000151893.14 TPM= 59.37 Transcript Type= protein_coding
chr10	118752927	118754984	118752927	118754984	-	transcript4063.chr10.nnic@NA	transcript4063.chr10.nnic	NA	118752927	118754984	Gene ID= novel_gene_chr10_4064 TPM= 3.86 Transcript Type= NA
chr10	119029716	119033732	119029716	119033732	+	ENST00000425699.2@NANOS1	ENST00000425699.2	protein_coding	119029716	119033732	Gene ID= ENSG00000188613.6 TPM= 28.96 Transcript Type= protein_coding
chr10	119030426	119031533	119030426	119031533	+	ENST00000340087.5@NANOS1	ENST00000340087.5	protein_coding	119030426	119031533	Gene ID= ENSG00000188613.6 TPM= 7.72 Transcript Type= protein_coding
chr10	119038345	119080876	119038345	119080876	-	transcript4083.chr10.nic@EIF3A	transcript4083.chr10.nic	protein_coding	119080628,119073747,119073441,119072890,119070886,119069446,119065399,119061224,119060746,119059602,119059212,119057956,119056936,119056740,119051199,119050521,119049801,119044054,119041994,119038345	119080876,119073937,119073577,119073053,119071085,119069654,119065570,119061328,119060844,119059718,119059397,119058303,119057040,119056853,119051321,119050674,119049985,119044142,119042772,119038439	Gene ID= ENSG00000107581.12 TPM= 15.55 Transcript Type= NA
chr10	119033670	119080804	119033670	119080804	-	ENST00000369144.7@EIF3A	ENST00000369144.7	protein_coding	119080628,119073747,119073441,119072890,119070886,119069446,119065399,119061224,119060746,119059602,119059212,119057956,119056936,119056740,119051199,119050521,119049801,119044054,119041994,119038238,119037119,119033670	119080804,119073937,119073577,119073053,119071085,119069654,119065570,119061328,119060844,119059718,119059397,119058303,119057040,119056853,119051321,119050674,119049985,119044142,119042772,119038439,119037309,119036268	Gene ID= ENSG00000107581.12 TPM= 10.72 Transcript Type= protein_coding
chr10	119035793	119080823	119035793	119080823	-	ENST00000541549.2@EIF3A	ENST00000541549.2	protein_coding	119080628,119073747,119073441,119072890,119070886,119069446,119065399,119061224,119060746,119059602,119059212,119057956,119056936,119056740,119051199,119050521,119049801,119044054,119041994,119038238,119037119,119036031,119035793	119080823,119073937,119073577,119073053,119071085,119069654,119065570,119061328,119060844,119059718,119059397,119058303,119057040,119056853,119051321,119050674,119049985,119044142,119042772,119038439,119037309,119036268,119035983	Gene ID= ENSG00000107581.12 TPM= 220.2 Transcript Type= protein_coding
chr10	119104082	119137195	119104082	119137195	+	transcript4123.chr10.nic@FAM45A	transcript4123.chr10.nic	protein_coding	119104082,119107948,119111849,119117519,119120341,119123469,119129515,119132515,119136471	119104197,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137195	Gene ID= ENSG00000119979.16 TPM= 3.86 Transcript Type= NA
chr10	119104087	119137180	119104087	119137180	+	transcript4126.chr10.nic@FAM45A	transcript4126.chr10.nic	protein_coding	119104087,119107968,119111849,119117519,119120341,119123469,119129515,119132515,119137057	119104197,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137180	Gene ID= ENSG00000119979.16 TPM= 1.93 Transcript Type= NA
chr10	119104117	119137195	119104117	119137195	+	ENST00000361432.2@FAM45A	ENST00000361432.2	protein_coding	119104117,119107968,119111849,119117519,119120341,119123469,119129515,119132515,119136471	119104197,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137195	Gene ID= ENSG00000119979.16 TPM= 10.62 Transcript Type= protein_coding
chr10	119140917	119165742	119140917	119165742	-	transcript4116.chr10.nnic@SFXN4	transcript4116.chr10.nnic	protein_coding	119165537,119164131,119162340,119161055,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119141150,119140917	119165742,119164196,119162414,119161081,119160969,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319,119141072	Gene ID= ENSG00000183605.16 TPM= 1.93 Transcript Type= NA
chr10	119140913	119165558	119140913	119165558	-	transcript4117.chr10.nic@SFXN4	transcript4117.chr10.nic	protein_coding	119165202,119164131,119162340,119161055,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140913	119165558,119164196,119162414,119161081,119160969,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319	Gene ID= ENSG00000183605.16 TPM= 5.79 Transcript Type= NA
chr10	119140913	119165667	119140913	119165667	-	ENST00000355697.6@SFXN4	ENST00000355697.6	protein_coding	119165537,119164131,119162340,119161055,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140913	119165667,119164196,119162414,119161081,119160969,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319	Gene ID= ENSG00000183605.16 TPM= 55.02 Transcript Type= protein_coding
chr10	119167703	119178833	119167703	119178833	-	ENST00000298510.3@PRDX3	ENST00000298510.3	protein_coding	119178755,119177021,119174451,119173737,119172382,119169177,119167703	119178833,119177153,119174592,119173872,119172485,119169342,119168533	Gene ID= ENSG00000165672.6 TPM= 629.87 Transcript Type= protein_coding
chr10	119207589	119455619	119207589	119455619	+	ENST00000392870.2@GRK5	ENST00000392870.2	protein_coding	119207589,119326516,119380815,119396695,119423166,119424993,119430375,119431387,119436651,119439731,119441999,119443544,119448123,119452671,119453145,119454969	119207969,119326611,119380927,119396772,119423266,119425085,119430438,119431527,119436841,119439768,119442088,119443752,119448260,119452808,119453276,119455619	Gene ID= ENSG00000198873.11 TPM= 3.86 Transcript Type= protein_coding
chr10	119499925	119542708	119499925	119542708	-	ENST00000369103.2@RGS10	ENST00000369103.2	protein_coding	119542590,119527306,119526032,119515509,119499925	119542708,119527424,119526118,119515652,119500259	Gene ID= ENSG00000148908.14 TPM= 9.65 Transcript Type= protein_coding
chr10	119573468	119596961	119573468	119596961	-	transcript4144.chr10.nic@TIAL1	transcript4144.chr10.nic	protein_coding	119596434,119593452,119588152,119582459,119582169,119581922,119579935,119578726,119577641,119577451,119577080,119576611,119573468	119596961,119593513,119588248,119582557,119582223,119582009,119580010,119578834,119577736,119577535,119577203,119576750,119575791	Gene ID= ENSG00000151923.17 TPM= 41.51 Transcript Type= NA
chr10	119651370	119677819	119651370	119677819	+	ENST00000369085.7@BAG3	ENST00000369085.7	protein_coding	119651370,119669851,119672255,119676464	119651855,119670177,119672656,119677819	Gene ID= ENSG00000151929.9 TPM= 1802.72 Transcript Type= protein_coding
chr10	119651488	119653062	119651488	119653062	+	transcript4173.chr10.nnic@NA	transcript4173.chr10.nnic	NA	119651488	119653062	Gene ID= novel_gene_chr10_4174 TPM= 16.89 Transcript Type= NA
chr10	119656380	119659966	119656380	119659966	-	transcript4181.chr10.nnic@NA	transcript4181.chr10.nnic	NA	119656380	119659966	Gene ID= novel_gene_chr10_4182 TPM= 29.92 Transcript Type= NA
chr10	119726148	119823897	119726148	119823897	+	transcript4186.chr10.nic@INPP5F	transcript4186.chr10.nic	protein_coding	119726148,119751076,119781635,119791517,119791869,119792157,119796715,119797461,119798543,119804173,119805384,119806360,119807932,119810100,119811757,119820846,119822431,119823071,119823815	119726359,119751156,119781771,119791645,119792036,119792213,119796913,119797640,119798610,119804297,119805461,119806480,119808060,119810217,119811955,119820917,119822504,119823199,119823897	Gene ID= ENSG00000198825.12 TPM= 1.93 Transcript Type= NA
chr10	119726162	119792197	119726162	119792197	+	ENST00000369081.3@INPP5F	ENST00000369081.3	protein_coding	119726162,119751076,119781635,119791517,119791869	119726359,119751156,119781771,119791645,119792197	Gene ID= ENSG00000198825.12 TPM= 6.76 Transcript Type= protein_coding
chr10	119831201	119873611	119831201	119873611	-	transcript4197.chr10.nic@MCMBP	transcript4197.chr10.nic	protein_coding	119873431,119859799,119859041,119858884,119857338,119853050,119849425,119847613,119843254,119842472,119840843,119838535,119836896,119835540,119832012,119831201	119873611,119859884,119859181,119858925,119857439,119853194,119849576,119847713,119843426,119842595,119840960,119838700,119837029,119835704,119832100,119831600	Gene ID= ENSG00000197771.12 TPM= 2.41 Transcript Type= NA
chr10	119831197	119872849	119831197	119872849	-	ENST00000369077.3@MCMBP	ENST00000369077.3	protein_coding	119872527,119859799,119859041,119858884,119857338,119853050,119849425,119847613,119843254,119842472,119840843,119838535,119836896,119835540,119832012,119831197	119872849,119859884,119859181,119858925,119857439,119853194,119849576,119847713,119843426,119842595,119840960,119838700,119837029,119835704,119832100,119831600	Gene ID= ENSG00000197771.12 TPM= 28.48 Transcript Type= protein_coding
chr10	119892704	119933833	119892704	119933833	+	transcript4210.chr10.nic@SEC23IP	transcript4210.chr10.nic	protein_coding	119892704,119898427,119902799,119904084,119909041,119912044,119914730,119915748,119917836,119918393,119919444,119920889,119926036,119929607,119930329,119932133,119933005,119933686	119892945,119898959,119903009,119904277,119909130,119912164,119914819,119915889,119918044,119918511,119919596,119920984,119926227,119929762,119930431,119932318,119933167,119933833	Gene ID= ENSG00000107651.12 TPM= 9.65 Transcript Type= NA
chr10	119902807	119904662	119902807	119904662	+	ENST00000442952.1@SEC23IP	ENST00000442952.1	protein_coding	119902807,119904084	119903009,119904662	Gene ID= ENSG00000107651.12 TPM= 1.93 Transcript Type= protein_coding
chr10	120354701	120355183	120354701	120355183	-	ENST00000495531.1@RPL21P16	ENST00000495531.1	processed_pseudogene	120354701	120355183	Gene ID= ENSG00000220842.6 TPM= 47.3 Transcript Type= processed_pseudogene
chr10	121740424	121928036	121740424	121928036	-	ENST00000369043.7@ATE1	ENST00000369043.7	protein_coding	121927844,121924266,121922349,121913790,121910906,121902391,121898841,121870006,121841082,121836718,121790169,121740424	121928036,121924329,121922411,121913893,121911151,121902620,121898969,121870038,121841263,121836817,121790289,121743858	Gene ID= ENSG00000107669.17 TPM= 12.07 Transcript Type= protein_coding
chr10	121740421	121928063	121740421	121928063	-	ENST00000224652.10@ATE1	ENST00000224652.10	protein_coding	121927844,121924266,121922349,121913790,121910906,121902391,121899866,121870006,121841082,121836718,121790169,121740421	121928063,121924329,121922411,121913893,121911151,121902620,121899994,121870038,121841263,121836817,121790289,121743858	Gene ID= ENSG00000107669.17 TPM= 8.21 Transcript Type= protein_coding
chr10	121789297	121928034	121789297	121928034	-	transcript4229.chr10.nic@ATE1	transcript4229.chr10.nic	protein_coding	121927844,121924266,121922349,121913790,121910906,121902391,121898841,121870006,121841082,121836718,121789297	121928034,121924329,121922411,121913893,121911151,121902620,121898969,121870038,121841263,121836817,121790289	Gene ID= ENSG00000107669.17 TPM= 1.93 Transcript Type= NA
chr10	121957091	121975229	121957091	121975229	-	transcript4240.chr10.nnic@NSMCE4A	transcript4240.chr10.nnic	protein_coding	121974874,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959324,121957091	121975229,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 6.27 Transcript Type= NA
chr10	121967646	121975210	121967646	121975210	-	transcript4246.chr10.nnic@NSMCE4A	transcript4246.chr10.nnic	protein_coding	121974874,121974004,121973523,121970939,121967646	121975210,121974081,121973599,121971069,121967806	Gene ID= ENSG00000107672.14 TPM= 2.9 Transcript Type= NA
chr10	121967646	121975199	121967646	121975199	-	transcript4247.chr10.nic@NSMCE4A	transcript4247.chr10.nic	protein_coding	121974874,121974004,121970939,121967646	121975199,121974081,121971069,121967806	Gene ID= ENSG00000107672.14 TPM= 2.9 Transcript Type= NA
chr10	121957088	121975217	121957088	121975217	-	ENST00000369023.7@NSMCE4A	ENST00000369023.7	protein_coding	121974874,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957088	121975217,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 10.14 Transcript Type= protein_coding
chr10	122210636	122254538	122210636	122254538	+	transcript4249.chr10.nic@TACC2	transcript4249.chr10.nic	protein_coding	122210636,122213342,122215391,122216627,122224726,122226366,122227837,122229346,122230351,122237395,122237961,122241958,122248643,122249050,122249544,122253991	122211708,122213377,122215451,122216828,122224787,122226481,122228008,122229486,122230440,122237538,122238037,122242001,122248803,122249156,122249664,122254538	Gene ID= ENSG00000138162.18 TPM= 35.72 Transcript Type= NA
chr10	122163774	122254545	122163774	122254545	+	ENST00000369004.7@TACC2	ENST00000369004.7	protein_coding	122163774,122195040,122210397,122213342,122215391,122216627,122224726,122226366,122227837,122229346,122237395,122237961,122241958,122248643,122249050,122249544,122253991	122163992,122195176,122211708,122213377,122215451,122216828,122224787,122226481,122228008,122229486,122237538,122238037,122242001,122248803,122249156,122249664,122254545	Gene ID= ENSG00000138162.18 TPM= 9.17 Transcript Type= protein_coding
chr10	122211272	122254538	122211272	122254538	+	transcript4252.chr10.nic@TACC2	transcript4252.chr10.nic	protein_coding	122211272,122215403,122216627,122224726,122226366,122227837,122229346,122230351,122237395,122237961,122241958,122248643,122249050,122249544,122253991	122211708,122215451,122216828,122224787,122226481,122228008,122229486,122230440,122237538,122238037,122242001,122248803,122249156,122249664,122254538	Gene ID= ENSG00000138162.18 TPM= 34.27 Transcript Type= NA
chr10	121994586	122088775	121994586	122088775	+	transcript4255.chr10.nic@TACC2	transcript4255.chr10.nic	protein_coding	121994586,122021937,122050438,122082647,122088478	121994710,122022014,122050550,122087959,122088775	Gene ID= ENSG00000138162.18 TPM= 46.33 Transcript Type= NA
chr10	122200019	122202243	122200019	122202243	+	transcript4258.chr10.nnic@NA	transcript4258.chr10.nnic	NA	122200019	122202243	Gene ID= novel_gene_chr10_4259 TPM= 1.93 Transcript Type= NA
chr10	122374565	122432345	122374565	122432345	+	transcript4262.chr10.nnic@PLEKHA1	transcript4262.chr10.nnic	protein_coding	122374565,122392303,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624	122374806,122392372,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122432345	Gene ID= ENSG00000107679.14 TPM= 17.38 Transcript Type= NA
chr10	122374944	122430128	122374944	122430128	+	transcript4265.chr10.nnic@PLEKHA1	transcript4265.chr10.nnic	protein_coding	122374944,122392303,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624	122375559,122392372,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122430128	Gene ID= ENSG00000107679.14 TPM= 2.73 Transcript Type= NA
chr10	122374631	122432345	122374631	122432345	+	transcript4268.chr10.nic@PLEKHA1	transcript4268.chr10.nic	protein_coding	122374631,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624	122374806,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122432345	Gene ID= ENSG00000107679.14 TPM= 10.14 Transcript Type= NA
chr10	122461525	122514908	122461525	122514908	+	ENST00000368984.7@HTRA1	ENST00000368984.7	protein_coding	122461525,122488902,122489422,122506691,122507370,122508656,122510096,122511970,122514191	122462124,122489001,122489626,122506885,122507402,122508770,122510153,122512065,122514908	Gene ID= ENSG00000166033.11 TPM= 19.79 Transcript Type= protein_coding
chr10	122506691	122514907	122506691	122514907	+	ENST00000420892.1@HTRA1	ENST00000420892.1	protein_coding	122506691,122507370,122508656,122510096,122511970,122514191	122506885,122507402,122508770,122510153,122512065,122514907	Gene ID= ENSG00000166033.11 TPM= 2.41 Transcript Type= protein_coding
chr10	122931508	122954403	122931508	122954403	-	ENST00000481909.1@C10orf88	ENST00000481909.1	protein_coding	122954015,122952829,122951954,122948649,122937705,122931508	122954403,122953032,122952026,122948855,122938159,122932661	Gene ID= ENSG00000119965.12 TPM= 7.72 Transcript Type= protein_coding
chr10	122990806	123008817	122990806	123008817	-	ENST00000368886.9@IKZF5	ENST00000368886.9	protein_coding	123008694,123007026,122998493,122995994,122990806	123008817,123007176,122998671,122996176,122994723	Gene ID= ENSG00000095574.11 TPM= 7.24 Transcript Type= protein_coding
chr10	122990808	123008813	122990808	123008813	-	transcript4286.chr10.nic@IKZF5	transcript4286.chr10.nic	protein_coding	123008694,122998493,122995994,122990808	123008813,122998671,122996176,122994723	Gene ID= ENSG00000095574.11 TPM= 6.27 Transcript Type= NA
chr10	123009016	123058311	123009016	123058311	+	ENST00000358776.6@ACADSB	ENST00000358776.6	protein_coding	123009016,123034356,123037747,123040466,123041209,123043046,123044393,123047209,123051049,123053061,123053695	123009071,123034515,123037847,123040672,123041379,123043171,123044485,123047298,123051186,123053160,123058311	Gene ID= ENSG00000196177.12 TPM= 13.51 Transcript Type= protein_coding
chr10	123154277	123170467	123154277	123170467	+	ENST00000368865.8@BUB3	ENST00000368865.8	protein_coding	123154277,123154918,123155658,123157729,123160407,123162236,123162612,123163820	123154485,123155112,123155727,123157880,123160565,123162413,123162828,123170467	Gene ID= ENSG00000154473.17 TPM= 3.86 Transcript Type= protein_coding
chr10	123154363	123165362	123154363	123165362	+	transcript4298.chr10.nic@BUB3	transcript4298.chr10.nic	protein_coding	123154363,123154918,123155658,123157729,123160407,123162236,123162612	123154485,123155112,123155727,123157880,123160565,123162413,123165362	Gene ID= ENSG00000154473.17 TPM= 2.9 Transcript Type= NA
chr10	123154415	123165365	123154415	123165365	+	ENST00000368858.9@BUB3	ENST00000368858.9	protein_coding	123154415,123154918,123155658,123157729,123160407,123162236,123162612,123165047	123154485,123155112,123155727,123157880,123160565,123162413,123162828,123165365	Gene ID= ENSG00000154473.17 TPM= 16.41 Transcript Type= protein_coding
chr10	123745636	123891814	123745636	123891814	-	ENST00000241305.3@CPXM2	ENST00000241305.3	protein_coding	123891356,123880211,123862614,123842349,123799115,123797976,123780167,123770916,123768526,123766973,123761872,123757213,123754663,123745636	123891814,123880309,123862723,123842488,123799199,123798126,123780255,123771039,123768722,123767152,123762169,123757352,123754762,123747017	Gene ID= ENSG00000121898.12 TPM= 3.86 Transcript Type= protein_coding
chr10	124007668	124092376	124007668	124092376	-	transcript4304.chr10.nnic@CHST15	transcript4304.chr10.nnic	protein_coding	124092227,124045667,124044580,124042301,124038515,124021256,124012333,124007668	124092376,124046724,124044919,124042447,124038671,124021412,124012480,124010339	Gene ID= ENSG00000182022.17 TPM= 9.82 Transcript Type= NA
chr10	124007666	124093607	124007666	124093607	-	ENST00000435907.5@CHST15	ENST00000435907.5	protein_coding	124093469,124045667,124044580,124042301,124038515,124021256,124012333,124007666	124093607,124046724,124044919,124042447,124038671,124021412,124012480,124010339	Gene ID= ENSG00000182022.17 TPM= 9.33 Transcript Type= protein_coding
chr10	124008400	124092901	124008400	124092901	-	transcript4310.chr10.nnic@CHST15	transcript4310.chr10.nnic	protein_coding	124092710,124045667,124044580,124042301,124038515,124021256,124012333,124008400	124092901,124046724,124044919,124042447,124038671,124021412,124012480,124010339	Gene ID= ENSG00000182022.17 TPM= 2.58 Transcript Type= NA
chr10	124007668	124093574	124007668	124093574	-	transcript4313.chr10.nnic@CHST15	transcript4313.chr10.nnic	protein_coding	124093469,124044580,124042301,124038515,124021256,124012333,124007668	124093574,124044919,124042447,124038671,124021412,124012480,124010339	Gene ID= ENSG00000182022.17 TPM= 7.24 Transcript Type= NA
chr10	124397307	124418936	124397307	124418936	-	ENST00000368845.5@OAT	ENST00000368845.5	protein_coding	124418873,124411973,124408741,124408542,124405436,124403798,124402927,124401726,124400840,124397307	124418936,124412200,124408965,124408637,124405563,124403920,124403055,124401839,124400984,124398102	Gene ID= ENSG00000065154.11 TPM= 99.91 Transcript Type= protein_coding
chr10	124397303	124418976	124397303	124418976	-	ENST00000539214.5@OAT	ENST00000539214.5	protein_coding	124418873,124408741,124408542,124405436,124403798,124402927,124401726,124400840,124397303	124418976,124408965,124408637,124405563,124403920,124403055,124401839,124400984,124398102	Gene ID= ENSG00000065154.11 TPM= 3.38 Transcript Type= protein_coding
chr10	124461835	124614141	124461835	124614141	+	ENST00000368842.9@LHPP	ENST00000368842.9	protein_coding	124461835,124484139,124488422,124496961,124498036,124517180,124613264	124461987,124484326,124488575,124497024,124498128,124517271,124614141	Gene ID= ENSG00000107902.13 TPM= 3.86 Transcript Type= protein_coding
chr10	124461834	124498514	124461834	124498514	+	ENST00000392757.8@LHPP	ENST00000392757.8	protein_coding	124461834,124484139,124488422,124496961,124498036,124498328	124461987,124484326,124488575,124497024,124498128,124498514	Gene ID= ENSG00000107902.13 TPM= 1.93 Transcript Type= protein_coding
chr10	124619292	124736633	124619292	124736633	-	transcript4351.chr10.nnic@FAM53B	transcript4351.chr10.nnic	protein_coding	124736454,124706636,124696158,124681607,124619292	124736633,124706887,124696212,124682379,124623604	Gene ID= ENSG00000189319.13 TPM= 4.99 Transcript Type= NA
chr10	124619292	124744482	124619292	124744482	-	transcript4353.chr10.nnic@FAM53B	transcript4353.chr10.nnic	protein_coding	124744013,124706841,124696158,124681607,124619292	124744482,124706887,124696212,124682379,124623604	Gene ID= ENSG00000189319.13 TPM= 3.06 Transcript Type= NA
chr10	124619292	124744380	124619292	124744380	-	transcript4356.chr10.nnic@FAM53B	transcript4356.chr10.nnic	protein_coding	124744013,124696158,124681607,124619292	124744380,124696212,124682379,124623604	Gene ID= ENSG00000189319.13 TPM= 3.06 Transcript Type= NA
chr10	124619292	124744410	124619292	124744410	-	transcript4359.chr10.nnic@FAM53B	transcript4359.chr10.nnic	protein_coding	124744013,124706636,124681607,124619292	124744410,124706887,124682379,124623604	Gene ID= ENSG00000189319.13 TPM= 6.92 Transcript Type= NA
chr10	124619292	124744050	124619292	124744050	-	ENST00000337318.7@FAM53B	ENST00000337318.7	protein_coding	124744013,124706636,124696158,124681607,124619292	124744050,124706887,124696212,124682379,124623604	Gene ID= ENSG00000189319.13 TPM= 243.42 Transcript Type= protein_coding
chr10	124743340	124745088	124743340	124745088	+	transcript4364.chr10.nnic@NA	transcript4364.chr10.nnic	NA	124743340	124745088	Gene ID= novel_gene_chr10_4365 TPM= 3.86 Transcript Type= NA
chr10	124757831	124791868	124757831	124791868	-	ENST00000466270.5@EEF1AKMT2	ENST00000466270.5	protein_coding	124791724,124790273,124789039,124774675,124765392,124762300,124757831	124791868,124790338,124789157,124774782,124765608,124762558,124760503	Gene ID= ENSG00000203791.14 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr10	124801785	124836670	124801785	124836670	+	ENST00000298492.5@ABRAXAS2	ENST00000298492.5	protein_coding	124801785,124806831,124816576,124819384,124826595,124828756,124829393,124831349,124834502	124801901,124806921,124816612,124819450,124826785,124828875,124829477,124831463,124836670	Gene ID= ENSG00000165660.7 TPM= 29.92 Transcript Type= protein_coding
chr10	124916829	124986464	124916829	124986464	+	transcript4429.chr10.nic@ZRANB1	transcript4429.chr10.nic	protein_coding	124916829,124942457,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774	124917272,124943307,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124986464	Gene ID= ENSG00000019995.6 TPM= 75.23 Transcript Type= NA
chr10	124916896	124918351	124916896	124918351	-	transcript4454.chr10.nnic@NA	transcript4454.chr10.nnic	NA	124916896	124918351	Gene ID= novel_gene_chr10_4455 TPM= 3.86 Transcript Type= NA
chr10	124988336	125160502	124988336	125160502	-	transcript4380.chr10.nic@CTBP2	transcript4380.chr10.nic	protein_coding	125160319,125110990,125088191,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988336	125160502,125111093,125088319,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698	Gene ID= ENSG00000175029.16 TPM= 1.93 Transcript Type= NA
chr10	124988336	125125048	124988336	125125048	-	transcript4381.chr10.nnic@CTBP2	transcript4381.chr10.nnic	protein_coding	125124844,125122657,125110990,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988336	125125048,125122868,125111093,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698	Gene ID= ENSG00000175029.16 TPM= 2.9 Transcript Type= NA
chr10	124988883	125160539	124988883	125160539	-	transcript4388.chr10.nnic@CTBP2	transcript4388.chr10.nnic	protein_coding	125160319,125133512,125110990,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988883	125160539,125133612,125111093,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698	Gene ID= ENSG00000175029.16 TPM= 1.93 Transcript Type= NA
chr10	124988883	125125111	124988883	125125111	-	transcript4420.chr10.nnic@CTBP2	transcript4420.chr10.nnic	protein_coding	125124844,125122657,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988883	125125111,125122868,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698	Gene ID= ENSG00000175029.16 TPM= 1.93 Transcript Type= NA
chr10	124988336	125160535	124988336	125160535	-	transcript4432.chr10.nic@CTBP2	transcript4432.chr10.nic	protein_coding	125160319,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988336	125160535,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698	Gene ID= ENSG00000175029.16 TPM= 5.79 Transcript Type= NA
chr10	125719703	125764139	125719703	125764139	+	ENST00000337623.7@EDRF1	ENST00000337623.7	protein_coding	125719703,125721204,125723068,125723811,125725318,125725682,125729358,125730288,125733404,125733635,125734072,125735644,125737918,125738295,125740463,125741001,125743058,125745707,125747536,125747863,125749412,125752799,125753694,125763301	125719915,125721412,125723134,125723936,125725442,125725838,125729479,125730399,125733551,125733743,125734183,125735904,125737989,125738445,125740651,125741201,125743276,125745930,125747694,125748012,125749565,125752914,125753845,125764139	Gene ID= ENSG00000107938.17 TPM= 13.51 Transcript Type= protein_coding
chr10	125788583	125823286	125788583	125823286	-	transcript4469.chr10.nnic@UROS	transcript4469.chr10.nnic	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125798065,125796790,125796103,125794880,125788583	125823286,125816525,125816260,125815130,125812288,125807487,125798145,125796861,125796188,125794978,125789005	Gene ID= ENSG00000188690.12 TPM= 5.6 Transcript Type= NA
chr10	125788587	125823286	125788587	125823286	-	transcript4471.chr10.nic@UROS	transcript4471.chr10.nic	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125798065,125796103,125794880,125789283,125788587	125823286,125816525,125816260,125815130,125812288,125807487,125798145,125796188,125794978,125789363,125789005	Gene ID= ENSG00000188690.12 TPM= 5.6 Transcript Type= NA
chr10	125788583	125823286	125788583	125823286	-	transcript4481.chr10.nnic@UROS	transcript4481.chr10.nnic	protein_coding	125823029,125816437,125816177,125812214,125807413,125798065,125796103,125794880,125788583	125823286,125816525,125816260,125812288,125807487,125798145,125796188,125794978,125789005	Gene ID= ENSG00000188690.12 TPM= 4.63 Transcript Type= NA
chr10	125788583	125823263	125788583	125823263	-	transcript4488.chr10.nnic@UROS	transcript4488.chr10.nnic	protein_coding	125823029,125812214,125807413,125798065,125796103,125794880,125788583	125823263,125812288,125807487,125798145,125796188,125794978,125789005	Gene ID= ENSG00000188690.12 TPM= 3.67 Transcript Type= NA
chr10	125788578	125823227	125788578	125823227	-	ENST00000368797.8@UROS	ENST00000368797.8	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125798065,125796103,125794880,125788578	125823227,125816525,125816260,125815130,125812288,125807487,125798145,125796188,125794978,125789005	Gene ID= ENSG00000188690.12 TPM= 46.14 Transcript Type= protein_coding
chr10	125823547	125842805	125823547	125842805	+	transcript4510.chr10.nnic@BCCIP	transcript4510.chr10.nnic	protein_coding	125823547,125827558,125830562,125831420,125833772,125841255	125823722,125827638,125830651,125831607,125833946,125842805	Gene ID= ENSG00000107949.16 TPM= 4.83 Transcript Type= NA
chr10	125823546	125853695	125823546	125853695	+	ENST00000368759.5@BCCIP	ENST00000368759.5	protein_coding	125823546,125826591,125827558,125830562,125831420,125833772,125841255,125853125	125823722,125826665,125827638,125830651,125831607,125833946,125841330,125853695	Gene ID= ENSG00000107949.16 TPM= 15.44 Transcript Type= protein_coding
chr10	125823546	125836553	125823546	125836553	+	ENST00000278100.10@BCCIP	ENST00000278100.10	protein_coding	125823546,125826591,125827558,125830562,125831420,125833772,125836104	125823722,125826665,125827638,125830651,125831607,125833946,125836553	Gene ID= ENSG00000107949.16 TPM= 59.85 Transcript Type= protein_coding
chr10	125823546	125842805	125823546	125842805	+	ENST00000299130.7@BCCIP	ENST00000299130.7	protein_coding	125823546,125826591,125827558,125830562,125831420,125833772,125841255	125823722,125826665,125827638,125830651,125831607,125833946,125842805	Gene ID= ENSG00000107949.16 TPM= 14.48 Transcript Type= protein_coding
chr10	125823946	125827003	125823946	125827003	+	transcript4518.chr10.nnic@NA	transcript4518.chr10.nnic	NA	125823946	125827003	Gene ID= novel_gene_chr10_4519 TPM= 1.93 Transcript Type= NA
chr10	125836337	125896514	125836337	125896514	-	transcript4492.chr10.nnic@DHX32	transcript4492.chr10.nnic	protein_coding	125896218,125885365,125880543,125866990,125859603,125853961,125852543,125852146,125841743,125840847,125839001,125838206,125836337	125896514,125885676,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 2.41 Transcript Type= NA
chr10	125836337	125896514	125836337	125896514	-	transcript4493.chr10.nnic@DHX32	transcript4493.chr10.nnic	protein_coding	125896218,125885365,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836337	125896514,125885676,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 23.17 Transcript Type= NA
chr10	125836337	125896512	125836337	125896512	-	transcript4497.chr10.nic@DHX32	transcript4497.chr10.nic	protein_coding	125896218,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836337	125896512,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 18.82 Transcript Type= NA
chr10	126905458	126907881	126905458	126907881	+	transcript4520.chr10.nnic@NA	transcript4520.chr10.nnic	NA	126905458	126907881	Gene ID= novel_gene_chr10_4521 TPM= 1.93 Transcript Type= NA
chr10	130035122	130110830	130035122	130110830	-	transcript4528.chr10.nnic@LINC00959	transcript4528.chr10.nnic	protein_coding	130110704,130079737,130079566,130035858,130035122	130110830,130079901,130079628,130035970,130035312	Gene ID= ENSG00000237489.3 TPM= 2.9 Transcript Type= NA
chr10	130063900	130110817	130063900	130110817	-	ENST00000637128.1@LINC00959	ENST00000637128.1	protein_coding	130110704,130079737,130079566,130063900	130110817,130079901,130079628,130064383	Gene ID= ENSG00000237489.3 TPM= 2.9 Transcript Type= protein_coding
chr10	130136385	130179611	130136385	130179611	+	transcript4533.chr10.nnic@GLRX3	transcript4533.chr10.nnic	protein_coding	130136385,130145211,130159995,130160796,130162542,130166507,130166919,130169433,130171584,130174867,130174997,130179342	130136512,130145319,130160069,130160997,130162580,130166679,130166980,130169490,130171636,130174906,130175089,130179611	Gene ID= ENSG00000108010.11 TPM= 2.9 Transcript Type= NA
chr10	130136385	130183643	130136385	130183643	+	transcript4536.chr10.nnic@GLRX3	transcript4536.chr10.nnic	protein_coding	130136385,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130180113,130183285	130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130180321,130183643	Gene ID= ENSG00000108010.11 TPM= 2.9 Transcript Type= NA
chr10	130136399	130179664	130136399	130179664	+	ENST00000331244.9@GLRX3	ENST00000331244.9	protein_coding	130136399,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130179342	130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130179664	Gene ID= ENSG00000108010.11 TPM= 3.38 Transcript Type= protein_coding
chr10	130136399	130182881	130136399	130182881	+	ENST00000368644.5@GLRX3	ENST00000368644.5	protein_coding	130136399,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130179342,130180113	130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130179420,130182881	Gene ID= ENSG00000108010.11 TPM= 1.45 Transcript Type= protein_coding
chr10	130177478	130179572	130177478	130179572	+	transcript4551.chr10.nnic@NA	transcript4551.chr10.nnic	NA	130177478	130179572	Gene ID= novel_gene_chr10_4552 TPM= 1.93 Transcript Type= NA
chr10	131900971	131956555	131900971	131956555	+	transcript4560.chr10.nic@PPP2R2D	transcript4560.chr10.nic	protein_coding	131900971,131901238,131934458,131934894,131940031,131940582,131943968,131945295,131947530,131955684	131901155,131901330,131934555,131935006,131940196,131940694,131944145,131945459,131947791,131956555	Gene ID= ENSG00000175470.18 TPM= 12.13 Transcript Type= NA
chr10	131900644	131959834	131900644	131959834	+	ENST00000455566.5@PPP2R2D	ENST00000455566.5	protein_coding	131900644,131901238,131934458,131940031,131940582,131943968,131945295,131947530,131955684	131901155,131901330,131934555,131940196,131940694,131944145,131945459,131947791,131959834	Gene ID= ENSG00000175470.18 TPM= 12.55 Transcript Type= protein_coding
chr10	131901029	131948329	131901029	131948329	+	transcript4575.chr10.nic@PPP2R2D	transcript4575.chr10.nic	protein_coding	131901029,131901238,131934458,131940031,131940582,131943968,131945295,131947530	131901155,131901330,131934555,131940196,131940694,131944145,131945459,131948329	Gene ID= ENSG00000175470.18 TPM= 2.9 Transcript Type= NA
chr10	131900990	131956555	131900990	131956555	+	transcript4577.chr10.nnic@PPP2R2D	transcript4577.chr10.nnic	protein_coding	131900990,131901238,131940031,131940582,131943968,131945295,131947530,131955684	131901155,131901330,131940196,131940694,131944145,131945459,131947791,131956555	Gene ID= ENSG00000175470.18 TPM= 12.13 Transcript Type= NA
chr10	131966455	131982013	131966455	131982013	-	ENST00000368636.8@BNIP3	ENST00000368636.8	protein_coding	131981761,131973793,131973034,131970864,131970638,131966455	131982013,131973943,131973118,131970970,131970787,131968569	Gene ID= ENSG00000176171.11 TPM= 10.62 Transcript Type= protein_coding
chr10	132207492	132307940	132207492	132307940	-	ENST00000298630.7@STK32C	ENST00000298630.7	protein_coding	132307572,132245900,132227977,132226795,132225747,132225527,132225233,132224407,132222861,132222641,132209034,132207492	132307940,132245955,132228128,132226968,132225784,132225616,132225336,132224523,132222986,132222772,132209101,132208151	Gene ID= ENSG00000165752.16 TPM= 2.9 Transcript Type= protein_coding
chr10	132329553	132331901	132329553	132331901	-	transcript4603.chr10.nnic@STK32C	transcript4603.chr10.nnic	protein_coding	132331482,132330390,132329553	132331901,132330485,132329996	Gene ID= ENSG00000165752.16 TPM= 2.9 Transcript Type= NA
chr10	132329551	132331882	132329551	132331882	-	transcript4606.chr10.nnic@STK32C	transcript4606.chr10.nnic	protein_coding	132331436,132329551	132331882,132329996	Gene ID= ENSG00000165752.16 TPM= 4.83 Transcript Type= NA
chr10	132397192	132417859	132397192	132417859	+	transcript4618.chr10.nnic@PWWP2B	transcript4618.chr10.nnic	protein_coding	132397192,132404626,132417061	132397351,132406783,132417859	Gene ID= ENSG00000171813.13 TPM= 5.31 Transcript Type= NA
chr10	132397145	132417863	132397145	132417863	+	transcript4621.chr10.nnic@PWWP2B	transcript4621.chr10.nnic	protein_coding	132397145,132404626,132417061	132397298,132406289,132417863	Gene ID= ENSG00000171813.13 TPM= 13.51 Transcript Type= NA
chr10	132403841	132417859	132403841	132417859	+	transcript4622.chr10.nnic@PWWP2B	transcript4622.chr10.nnic	protein_coding	132403841,132409762,132417061	132406289,132409879,132417859	Gene ID= ENSG00000171813.13 TPM= 2.9 Transcript Type= NA
chr10	132397168	132417863	132397168	132417863	+	ENST00000305233.5@PWWP2B	ENST00000305233.5	protein_coding	132397168,132404626,132417061	132397351,132406289,132417863	Gene ID= ENSG00000171813.13 TPM= 117.29 Transcript Type= protein_coding
chr10	132535828	132537324	132535828	132537324	-	transcript4627.chr10.nnic@NA	transcript4627.chr10.nnic	NA	132535828	132537324	Gene ID= novel_gene_chr10_4628 TPM= 1.93 Transcript Type= NA
chr10	132537754	132727349	132537754	132727349	+	transcript4631.chr10.nic@INPP5A	transcript4631.chr10.nic	protein_coding	132537754,132607915,132645868,132650418,132690392,132697816,132708313,132710337,132726821	132538171,132607956,132645968,132650505,132690455,132697919,132708365,132710456,132727349	Gene ID= ENSG00000068383.18 TPM= 4.83 Transcript Type= NA
chr10	132537820	132783480	132537820	132783480	+	ENST00000368594.7@INPP5A	ENST00000368594.7	protein_coding	132537820,132607915,132645868,132650418,132690392,132697816,132708313,132710337,132726821,132749517,132749771,132765773,132777671,132780849,132781861,132782037	132538171,132607956,132645968,132650505,132690455,132697919,132708365,132710456,132726905,132749612,132749845,132765846,132777782,132780917,132781948,132783480	Gene ID= ENSG00000068383.18 TPM= 102.32 Transcript Type= protein_coding
chr10	132808392	132836399	132808392	132836399	-	transcript4635.chr10.nnic@CFAP46	transcript4635.chr10.nnic	protein_coding	132836142,132834041,132833358,132814844,132814686,132814577,132814152,132812785,132810950,132810585,132810409,132808392	132836399,132834123,132833525,132814914,132814746,132814612,132814254,132812897,132811031,132810721,132810489,132808904	Gene ID= ENSG00000171811.13 TPM= 8.69 Transcript Type= NA
chr10	132832616	132836412	132832616	132836412	-	transcript4639.chr10.nic@CFAP46	transcript4639.chr10.nic	protein_coding	132836142,132835304,132834654,132834041,132833358,132832616	132836412,132835434,132834775,132834123,132833525,132832802	Gene ID= ENSG00000171811.13 TPM= 2.9 Transcript Type= NA
chr10	133279640	133308863	133279640	133308863	-	transcript4647.chr10.nnic@TUBGCP2	transcript4647.chr10.nnic	protein_coding	133308823,133302792,133299985,133299427,133297952,133293562,133293039,133292499,133289824,133288840,133288129,133285456,133285085,133283882,133283078,133281273,133279640	133308863,133302980,133300113,133299603,133298111,133293769,133293238,133292688,133289969,133289020,133288309,133285628,133285213,133284002,133283221,133281436,133279901	Gene ID= ENSG00000130640.13 TPM= 7.72 Transcript Type= NA
chr10	133308475	133313158	133308475	133313158	+	ENST00000361518.9@ZNF511	ENST00000361518.9	protein_coding	133308475,133309390,133309776,133310164,133311716,133312788	133309096,133309463,133309977,133310288,133311841,133313158	Gene ID= ENSG00000198546.14 TPM= 82.05 Transcript Type= protein_coding
chr10	133308941	133313162	133308941	133313162	+	ENST00000359035.4@ZNF511	ENST00000359035.4	protein_coding	133308941,133309390,133309776,133310164,133311716	133309096,133309463,133309977,133310288,133313162	Gene ID= ENSG00000198546.14 TPM= 3.86 Transcript Type= protein_coding
chr10	133355154	133358035	133355154	133358035	-	ENST00000278025.8@FUOM	ENST00000278025.8	protein_coding	133357923,133357187,133356943,133356640,133355738,133355154	133358035,133357255,133357013,133356738,133355811,133355436	Gene ID= ENSG00000148803.11 TPM= 1.93 Transcript Type= protein_coding
chr10	133362480	133373689	133362480	133373689	-	ENST00000368547.3@ECHS1	ENST00000368547.3	protein_coding	133373246,133370560,133369904,133368923,133366889,133365976,133364658,133362480	133373689,133370757,133370031,133369022,133366993,133366095,133364725,133362933	Gene ID= ENSG00000127884.4 TPM= 324.99 Transcript Type= protein_coding
chr10	133379234	133391694	133379234	133391694	+	ENST00000278060.9@PAOX	ENST00000278060.9	protein_coding	133379234,133379999,133381460,133383960,133388956,133389590,133391312	133379497,133380485,133381659,133384212,133389068,133389747,133391694	Gene ID= ENSG00000148832.15 TPM= 11.58 Transcript Type= protein_coding
chr10	133394207	133420495	133394207	133420495	+	transcript4681.chr10.nic@MTG1	transcript4681.chr10.nic	protein_coding	133394207,133395713,133396163,133398435,133399170,133399529,133402149,133402692,133419480,133420026	133394332,133395777,133396267,133398515,133399226,133401590,133402245,133402773,133419592,133420495	Gene ID= ENSG00000148824.18 TPM= 1.93 Transcript Type= NA
chr11	200973	207418	200973	207418	-	transcript1.chr11.nnic@BET1L	transcript1.chr11.nnic	protein_coding	207303,205952,205611,201561,200973	207418,206043,205667,201741,201225	Gene ID= ENSG00000177951.17 TPM= 1.93 Transcript Type= NA
chr11	202926	207428	202926	207428	-	ENST00000382762.7@BET1L	ENST00000382762.7	protein_coding	207303,205952,205611,202926	207428,206043,205667,205469	Gene ID= ENSG00000177951.17 TPM= 19.31 Transcript Type= protein_coding
chr11	202924	207382	202924	207382	-	ENST00000325147.13@BET1L	ENST00000325147.13	protein_coding	207303,205952,202924	207382,206043,205667	Gene ID= ENSG00000177951.17 TPM= 4.83 Transcript Type= protein_coding
chr11	208781	215113	208781	215113	+	transcript17.chr11.nic@RIC8A	transcript17.chr11.nic	protein_coding	208781,209175,209407,210571,211199,212416,212615,212837,213299,214230	208938,209318,210000,210662,211349,212511,212759,212981,213418,215113	Gene ID= ENSG00000177963.14 TPM= 8.69 Transcript Type= NA
chr11	207511	215113	207511	215113	+	ENST00000526104.5@RIC8A	ENST00000526104.5	protein_coding	207511,209271,209407,210571,211199,212416,212615,212837,213299,214230	208938,209318,210000,210662,211349,212511,212759,212981,213418,215113	Gene ID= ENSG00000177963.14 TPM= 81.09 Transcript Type= protein_coding
chr11	215458	236431	215458	236431	-	ENST00000382743.8@SIRT3	ENST00000382743.8	protein_coding	236048,233343,232983,230452,224078,218832,215458	236431,233534,233215,230552,224239,219041,216718	Gene ID= ENSG00000142082.14 TPM= 6.76 Transcript Type= protein_coding
chr11	216145	236368	216145	236368	-	transcript26.chr11.nic@SIRT3	transcript26.chr11.nic	protein_coding	236048,233343,232983,230452,224078,218778,216145	236368,233534,233215,230552,224239,219041,216718	Gene ID= ENSG00000142082.14 TPM= 4.83 Transcript Type= NA
chr11	216179	236342	216179	236342	-	transcript33.chr11.nic@SIRT3	transcript33.chr11.nic	protein_coding	236048,232983,230452,224078,218832,216179	236342,233215,230552,224239,219041,216718	Gene ID= ENSG00000142082.14 TPM= 1.93 Transcript Type= NA
chr11	216179	236350	216179	236350	-	transcript36.chr11.nic@SIRT3	transcript36.chr11.nic	protein_coding	236194,224078,218832,216179	236350,224239,219041,216718	Gene ID= ENSG00000142082.14 TPM= 1.93 Transcript Type= NA
chr11	236977	252981	236977	252981	+	ENST00000431206.6@PSMD13	ENST00000431206.6	protein_coding	236977,244041,244426,244675,247277,248776,248932,250803,251546,251820,252505	237144,244216,244469,244761,247448,248855,249057,250865,251626,251936,252981	Gene ID= ENSG00000185627.17 TPM= 16.25 Transcript Type= protein_coding
chr11	237000	252966	237000	252966	+	ENST00000525665.5@PSMD13	ENST00000525665.5	protein_coding	237000,238998,244041,244426,244675,247277,248776,248932,250803,251546,251820,252505	237144,239076,244216,244469,244761,247448,248855,249057,250865,251626,251936,252966	Gene ID= ENSG00000185627.17 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr11	307927	309392	307927	309392	+	ENST00000616316.1@IFITM2	ENST00000616316.1	protein_coding	307927,309013	308438,309392	Gene ID= ENSG00000185201.16 TPM= 88.81 Transcript Type= protein_coding
chr11	309531	311115	309531	311115	-	transcript62.chr11.nnic@NA	transcript62.chr11.nnic	NA	309531	311115	Gene ID= novel_gene_chr11_63 TPM= 1.93 Transcript Type= NA
chr11	313853	315272	313853	315272	+	ENST00000408968.3@IFITM1	ENST00000408968.3	protein_coding	313853,314922	314356,315272	Gene ID= ENSG00000185885.15 TPM= 81.09 Transcript Type= protein_coding
chr11	319669	321050	319669	321050	-	ENST00000399808.4@IFITM3	ENST00000399808.4	protein_coding	320565,319669	321050,319990	Gene ID= ENSG00000142089.15 TPM= 306 Transcript Type= protein_coding
chr11	405716	414976	405716	414976	-	ENST00000431843.6@SIGIRR	ENST00000431843.6	protein_coding	414823,409868,408695,408073,407817,407425,407062,406843,406349,405716	414976,410027,408893,408206,407957,407568,407164,406993,406538,406059	Gene ID= ENSG00000185187.12 TPM= 5.79 Transcript Type= protein_coding
chr11	405716	407135	405716	407135	-	ENST00000526395.5@SIGIRR	ENST00000526395.5	protein_coding	407062,406349,405716	407135,406538,406059	Gene ID= ENSG00000185187.12 TPM= 2.9 Transcript Type= protein_coding
chr11	450428	491399	450428	491399	+	transcript71.chr11.nic@PTDSS2	transcript71.chr11.nic	protein_coding	450428,460187,473895,479085,486939,487420,488199,488529,489400,489588,489883,490420,491121	450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,490642,491399	Gene ID= ENSG00000174915.11 TPM= 3.86 Transcript Type= NA
chr11	450279	491387	450279	491387	+	transcript75.chr11.nnic@PTDSS2	transcript75.chr11.nnic	protein_coding	450279,460187,473895,479085,486891,487420,488199,488529,489400,489588,489883,490420	450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,491387	Gene ID= ENSG00000174915.11 TPM= 14 Transcript Type= NA
chr11	450280	491387	450280	491387	+	ENST00000308020.5@PTDSS2	ENST00000308020.5	protein_coding	450280,460187,473895,479085,486939,487420,488199,488529,489400,489588,489883,490420	450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,491387	Gene ID= ENSG00000174915.11 TPM= 57.44 Transcript Type= protein_coding
chr11	450417	454822	450417	454822	+	transcript84.chr11.nnic@PTDSS2	transcript84.chr11.nnic	protein_coding	450417,451352,452020,452920	450637,451493,452435,454822	Gene ID= ENSG00000174915.11 TPM= 1.93 Transcript Type= NA
chr11	494515	506827	494515	506827	-	transcript90.chr11.nic@RNH1	transcript90.chr11.nic	protein_coding	506609,504824,502062,500484,499829,499015,498763,498457,497971,494883,494515	506827,504996,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 21.53 Transcript Type= NA
chr11	494515	507253	494515	507253	-	ENST00000397604.7@RNH1	ENST00000397604.7	protein_coding	507113,502062,500484,499829,499015,498763,498457,497971,494883,494515	507253,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 146.05 Transcript Type= protein_coding
chr11	494513	506821	494513	506821	-	ENST00000397614.5@RNH1	ENST00000397614.5	protein_coding	506609,502062,500484,499829,499015,498763,498457,497971,494883,494513	506821,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 16.22 Transcript Type= protein_coding
chr11	494561	507300	494561	507300	-	ENST00000356187.9@RNH1	ENST00000356187.9	protein_coding	507113,502062,500484,499829,499015,498763,498457,497971,494883,494561	507300,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 139.97 Transcript Type= protein_coding
chr11	494548	506785	494548	506785	-	ENST00000438658.6@RNH1	ENST00000438658.6	protein_coding	506609,502062,500484,499829,499015,498763,498457,497971,494883,494548	506785,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 13.51 Transcript Type= protein_coding
chr11	494515	506800	494515	506800	-	ENST00000397615.6@RNH1	ENST00000397615.6	protein_coding	506609,504824,502062,500484,499829,499015,498763,498457,497971,494883,494515	506800,504996,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 20.08 Transcript Type= protein_coding
chr11	494546	507218	494546	507218	-	ENST00000533410.5@RNH1	ENST00000533410.5	protein_coding	507113,504824,502062,500484,499829,499015,498763,498457,497971,494883,494546	507218,504996,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 19.31 Transcript Type= protein_coding
chr11	494552	507221	494552	507221	-	ENST00000354420.6@RNH1	ENST00000354420.6	protein_coding	507113,504824,502062,500484,499829,499015,498763,498457,497971,494883,494552	507221,504996,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 22.2 Transcript Type= protein_coding
chr11	532242	535609	532242	535609	-	transcript127.chr11.nnic@HRAS	transcript127.chr11.nnic	protein_coding	535416,533453,533277,532631,532242	535609,533612,533358,532755,532522	Gene ID= ENSG00000174775.16 TPM= 1.93 Transcript Type= NA
chr11	532242	535542	532242	535542	-	transcript128.chr11.nnic@HRAS	transcript128.chr11.nnic	protein_coding	535416,533766,533453,532631,532242	535542,533944,533612,532755,532522	Gene ID= ENSG00000174775.16 TPM= 3.86 Transcript Type= NA
chr11	532243	535550	532243	535550	-	ENST00000417302.5@HRAS	ENST00000417302.5	protein_coding	535416,534212,533766,533453,533277,532243	535550,534375,533944,533612,533358,532755	Gene ID= ENSG00000174775.16 TPM= 6.76 Transcript Type= protein_coding
chr11	532242	535538	532242	535538	-	ENST00000493230.5@HRAS	ENST00000493230.5	protein_coding	535416,534212,533766,533453,533277,532631,532242	535538,534375,533944,533612,533358,532755,532522	Gene ID= ENSG00000174775.16 TPM= 16.41 Transcript Type= nonsense_mediated_decay
chr11	532243	535550	532243	535550	-	ENST00000451590.5@HRAS	ENST00000451590.5	protein_coding	535416,534212,533766,533453,532243	535550,534375,533944,533612,532755	Gene ID= ENSG00000174775.16 TPM= 4.83 Transcript Type= protein_coding
chr11	532242	533612	532242	533612	-	ENST00000478324.5@HRAS	ENST00000478324.5	protein_coding	533453,533277,532242	533612,533358,532630	Gene ID= ENSG00000174775.16 TPM= 1.93 Transcript Type= processed_transcript
chr11	560956	564012	560956	564012	+	ENST00000397582.7@RASSF7	ENST00000397582.7	protein_coding	560956,561762,562079,563189	561033,561892,562776,564012	Gene ID= ENSG00000099849.14 TPM= 1.93 Transcript Type= protein_coding
chr11	575212	575878	575212	575878	-	transcript135.chr11.nnic@NA	transcript135.chr11.nnic	NA	575212	575878	Gene ID= novel_gene_chr11_136 TPM= 2.9 Transcript Type= NA
chr11	573805	575981	573805	575981	-	transcript137.chr11.nnic@NA	transcript137.chr11.nnic	NA	573805	575981	Gene ID= novel_gene_chr11_136 TPM= 2.9 Transcript Type= NA
chr11	612559	615999	612559	615999	-	ENST00000397574.6@IRF7	ENST00000397574.6	protein_coding	615913,615345,615097,614797,614476,614174,613951,613785,613206,612999,612559	615999,615647,615259,615007,614534,614399,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 18.75 Transcript Type= protein_coding
chr11	612555	615950	612555	615950	-	transcript145.chr11.nic@IRF7	transcript145.chr11.nic	protein_coding	615913,615345,615097,614797,614476,613951,613785,613206,612999,612555	615950,615647,615259,615007,614534,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 5.23 Transcript Type= NA
chr11	612555	615950	612555	615950	-	transcript146.chr11.nic@IRF7	transcript146.chr11.nic	protein_coding	615913,615345,615097,614797,614476,614174,613785,613206,612999,612555	615950,615647,615259,615007,614534,614399,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 2.65 Transcript Type= NA
chr11	612555	615950	612555	615950	-	transcript147.chr11.nic@IRF7	transcript147.chr11.nic	protein_coding	615913,615097,614797,614476,613951,613785,613206,612999,612555	615950,615647,615007,614534,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 6.2 Transcript Type= NA
chr11	612591	615970	612591	615970	-	ENST00000330243.9@IRF7	ENST00000330243.9	protein_coding	615913,615097,614797,614476,614174,613951,613785,613206,612999,612591	615970,615647,615007,614534,614399,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 4.83 Transcript Type= protein_coding
chr11	644233	695054	644233	695054	-	transcript156.chr11.nic@DEAF1	transcript156.chr11.nic	protein_coding	694759,691501,688331,687911,686858,684898,680963,679688,678694,674536,653962,651162,644233	695054,691598,688460,688057,686997,684963,681089,679816,678822,674783,654051,651407,644654	Gene ID= ENSG00000177030.16 TPM= 4.75 Transcript Type= NA
chr11	644233	695013	644233	695013	-	transcript161.chr11.nic@DEAF1	transcript161.chr11.nic	protein_coding	694679,691501,688331,687911,686858,684898,680963,679688,678694,674536,653962,644233	695013,691598,688460,688057,686997,684963,681089,679816,678822,674783,654051,644654	Gene ID= ENSG00000177030.16 TPM= 7.65 Transcript Type= NA
chr11	644233	695532	644233	695532	-	ENST00000382409.3@DEAF1	ENST00000382409.3	protein_coding	694759,691501,688331,687911,686858,684898,680963,679688,678694,674536,653962,644233	695532,691598,688460,688057,686997,684963,681089,679816,678822,674783,654051,644654	Gene ID= ENSG00000177030.16 TPM= 54.95 Transcript Type= protein_coding
chr11	674372	695060	674372	695060	-	transcript173.chr11.nic@DEAF1	transcript173.chr11.nic	protein_coding	694759,691501,688331,687911,686858,684898,680963,679688,678694,674372	695060,691598,688460,688057,686997,684963,681089,679816,678822,674783	Gene ID= ENSG00000177030.16 TPM= 5.07 Transcript Type= NA
chr11	695792	704129	695792	704129	+	transcript176.chr11.nic@TMEM80	transcript176.chr11.nic	protein_coding	695792,698869,700142,700615,702945,703800	695846,698888,700235,700707,703146,704129	Gene ID= ENSG00000177042.14 TPM= 5.79 Transcript Type= NA
chr11	695643	704129	695643	704129	+	ENST00000397512.7@TMEM80	ENST00000397512.7	protein_coding	695643,698869,700142,700615,702945	695822,698888,700235,700707,704129	Gene ID= ENSG00000177042.14 TPM= 12.55 Transcript Type= protein_coding
chr11	695809	696449	695809	696449	+	transcript182.chr11.nnic@NA	transcript182.chr11.nnic	NA	695809	696449	Gene ID= novel_gene_chr11_183 TPM= 7.72 Transcript Type= NA
chr11	695813	699760	695813	699760	+	transcript184.chr11.nnic@NA	transcript184.chr11.nnic	NA	695813	699760	Gene ID= novel_gene_chr11_185 TPM= 2.9 Transcript Type= NA
chr11	701408	703534	701408	703534	-	transcript186.chr11.nnic@NA	transcript186.chr11.nnic	NA	701408	703534	Gene ID= novel_gene_chr11_187 TPM= 15.44 Transcript Type= NA
chr11	747329	765024	747329	765024	+	ENST00000319006.7@TALDO1	ENST00000319006.7	protein_coding	747329,755879,758950,760122,763344,763747,764288,764813	747578,756002,759057,760253,763519,763944,764433,765024	Gene ID= ENSG00000177156.10 TPM= 148.66 Transcript Type= protein_coding
chr11	767225	777484	767225	777484	-	ENST00000319863.12@GATD1	ENST00000319863.12	protein_coding	777399,775066,774008,773522,772427,771333,770993,767225	777484,775142,774113,773629,772521,771426,771104,770903	Gene ID= ENSG00000177225.16 TPM= 5.79 Transcript Type= protein_coding
chr11	777608	784297	777608	784297	+	ENST00000525941.1@AP006621.3	ENST00000525941.1	lincRNA	777608,778113,783530,784024	777695,778218,783671,784297	Gene ID= ENSG00000255284.1 TPM= 3.86 Transcript Type= lincRNA
chr11	779317	783305	779317	783305	+	transcript201.chr11.nnic@NA	transcript201.chr11.nnic	NA	779317	783305	Gene ID= novel_gene_chr11_202 TPM= 1.93 Transcript Type= NA
chr11	809965	812880	809965	812880	+	ENST00000532004.5@RPLP2	ENST00000532004.5	protein_coding	809965,811597,812535,812760	810048,811645,812633,812880	Gene ID= ENSG00000177600.8 TPM= 16.89 Transcript Type= processed_transcript
chr11	809647	812875	809647	812875	+	ENST00000321153.8@RPLP2	ENST00000321153.8	protein_coding	809647,810234,811597,812535,812760	810039,810357,811645,812633,812875	Gene ID= ENSG00000177600.8 TPM= 595.11 Transcript Type= protein_coding
chr11	819503	825218	819503	825218	+	transcript226.chr11.nic@PNPLA2	transcript226.chr11.nic	protein_coding	819503,821628,821958,822397,823527,823694,823998,824314,824523	819905,821860,822023,822606,823587,823855,824130,824436,825218	Gene ID= ENSG00000177666.16 TPM= 145.28 Transcript Type= NA
chr11	819571	825218	819571	825218	+	transcript228.chr11.nnic@PNPLA2	transcript228.chr11.nnic	protein_coding	819571,821741,821958,822397,823527,823694,823998,824314,824523	819905,821860,822023,822606,823587,823855,824130,824436,825218	Gene ID= ENSG00000177666.16 TPM= 33.3 Transcript Type= NA
chr11	829307	831985	829307	831985	+	ENST00000528694.1@CRACR2B	ENST00000528694.1	protein_coding	829307,831535	831295,831985	Gene ID= ENSG00000177685.16 TPM= 2.9 Transcript Type= retained_intron
chr11	832952	838834	832952	838834	+	ENST00000397421.5@CD151	ENST00000397421.5	protein_coding	832952,836063,836251,836769,837250,837460,837942,838133	833026,836153,836442,836843,837354,837618,838028,838834	Gene ID= ENSG00000177697.17 TPM= 39.74 Transcript Type= protein_coding
chr11	832952	838834	832952	838834	+	ENST00000322008.8@CD151	ENST00000322008.8	protein_coding	832952,834530,836063,836251,836769,837250,837460,837942,838133	833026,834591,836153,836442,836843,837354,837618,838028,838834	Gene ID= ENSG00000177697.17 TPM= 153.65 Transcript Type= protein_coding
chr11	834527	838835	834527	838835	+	ENST00000532045.5@CD151	ENST00000532045.5	protein_coding	834527,836063,836251,837250,837460,837942,838133	834591,836153,836843,837354,837618,838028,838835	Gene ID= ENSG00000177697.17 TPM= 8.37 Transcript Type= retained_intron
chr11	839721	842545	839721	842545	-	ENST00000322028.4@POLR2L	ENST00000322028.4	protein_coding	842414,839721	842545,840480	Gene ID= ENSG00000177700.5 TPM= 4.83 Transcript Type= protein_coding
chr11	842808	867111	842808	867111	+	ENST00000397397.6@TSPAN4	ENST00000397397.6	protein_coding	842808,847201,850288,862550,864437,865513,865694,865918,866562	842915,847300,850367,862741,864511,865614,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 26.21 Transcript Type= protein_coding
chr11	842941	867116	842941	867116	+	ENST00000397408.5@TSPAN4	ENST00000397408.5	protein_coding	842941,847201,850288,862550,864437,865513,865694,865918,866562	843050,847300,850367,862741,864511,865614,865825,866001,867116	Gene ID= ENSG00000214063.10 TPM= 4.97 Transcript Type= protein_coding
chr11	844081	867116	844081	867116	+	ENST00000397406.5@TSPAN4	ENST00000397406.5	protein_coding	844081,847201,850288,862550,864437,865513,865694,865918,866562	844186,847300,850367,862741,864511,865614,865825,866001,867116	Gene ID= ENSG00000214063.10 TPM= 3.04 Transcript Type= protein_coding
chr11	842833	867111	842833	867111	+	transcript251.chr11.nic@TSPAN4	transcript251.chr11.nic	protein_coding	842833,847201,850288,862550,864437,865513,865918,866562	842915,847300,850367,862741,864511,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 3.28 Transcript Type= NA
chr11	846785	867111	846785	867111	+	transcript255.chr11.nic@TSPAN4	transcript255.chr11.nic	protein_coding	846785,850288,862550,864437,865513,865694,865918,866562	847300,850367,862741,864511,865614,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 3.04 Transcript Type= NA
chr11	868396	911461	868396	911461	-	ENST00000323578.12@CHID1	ENST00000323578.12	protein_coding	910775,904706,902962,902198,900936,900004,899340,893427,884068,883148,870419,870121,868396	911461,904859,903111,902330,900980,900110,899401,893519,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 4.83 Transcript Type= protein_coding
chr11	869762	910835	869762	910835	-	ENST00000429789.6@CHID1	ENST00000429789.6	protein_coding	910775,904706,902962,902198,900936,900004,899340,884068,883148,870419,870121,869762	910835,904859,903111,902330,900980,900110,899401,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 3.86 Transcript Type= protein_coding
chr11	880874	910835	880874	910835	-	transcript267.chr11.nnic@CHID1	transcript267.chr11.nnic	protein_coding	910775,904706,902962,902198,900936,900004,899340,893427,884068,883148,881663,880874	910835,904859,903111,902330,900980,900110,899401,893519,884169,883303,882515,881625	Gene ID= ENSG00000177830.17 TPM= 6.76 Transcript Type= NA
chr11	869767	910831	869767	910831	-	ENST00000436108.6@CHID1	ENST00000436108.6	protein_coding	910775,908542,904706,902962,902198,900936,900004,899340,893427,884068,883148,870419,870121,869767	910831,908645,904859,903111,902330,900980,900110,899401,893519,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 17.38 Transcript Type= protein_coding
chr11	890433	893848	890433	893848	+	transcript275.chr11.nnic@NA	transcript275.chr11.nnic	NA	890433	893848	Gene ID= novel_gene_chr11_276 TPM= 2.9 Transcript Type= NA
chr11	925809	1012245	925809	1012245	+	ENST00000332231.9@AP2A2	ENST00000332231.9	protein_coding	925809,959437,970169,972062,977095,981198,984645,985432,986785,988552,992503,993284,993754,994072,1000432,1003722,1006528,1008012,1009100,1009328,1009683,1010548	926088,959505,970311,972255,977224,981299,984753,985582,986953,988689,992685,993381,993985,994245,1000598,1003804,1006617,1008135,1009216,1009397,1009817,1012245	Gene ID= ENSG00000183020.13 TPM= 15.93 Transcript Type= protein_coding
chr11	925900	1010919	925900	1010919	+	ENST00000528815.5@AP2A2	ENST00000528815.5	protein_coding	925900,959437,970169,972062,977095,981198,984645,985432,986785,988552,992503,993284,993754,994072,1003722,1006528,1008012,1009100,1009328,1009683,1010548	926088,959505,970311,972255,977224,981299,984753,985582,986953,988689,992685,993381,993985,994245,1003804,1006617,1008135,1009216,1009397,1009817,1010919	Gene ID= ENSG00000183020.13 TPM= 2.41 Transcript Type= nonsense_mediated_decay
chr11	1274371	1309622	1274371	1309622	-	ENST00000317204.10@TOLLIP	ENST00000317204.10	protein_coding	1309466,1295645,1290227,1288624,1286002,1274371	1309622,1295794,1290409,1288776,1286092,1277253	Gene ID= ENSG00000078902.15 TPM= 115.84 Transcript Type= protein_coding
chr11	1309769	1310707	1309769	1310707	+	ENST00000530897.1@TOLLIP-AS1	ENST00000530897.1	antisense_RNA	1309769	1310707	Gene ID= ENSG00000255153.1 TPM= 16.41 Transcript Type= antisense_RNA
chr11	1469457	1501248	1469457	1501248	-	transcript304.chr11.nnic@MOB2	transcript304.chr11.nnic	protein_coding	1501077,1480771,1480393,1471295,1469457	1501248,1480885,1480486,1471419,1470488	Gene ID= ENSG00000182208.13 TPM= 15.44 Transcript Type= NA
chr11	1732410	1750580	1732410	1750580	-	ENST00000382123.1@IFITM10	ENST00000382123.1	protein_coding	1750359,1749015,1747667,1732410	1750580,1749126,1748119,1735429	Gene ID= ENSG00000244242.1 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr11	1734821	1763954	1734821	1763954	-	ENST00000636615.1@AC068580.4	ENST00000636615.1	protein_coding	1763792,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1747667,1734821	1763954,1761468,1759639,1759087,1757556,1755028,1754138,1753901,1748119,1735429	Gene ID= ENSG00000250644.3 TPM= 14.87 Transcript Type= protein_coding
chr11	1752752	1762487	1752752	1762487	-	transcript330.chr11.nic@CTSD	transcript330.chr11.nic	protein_coding	1762133,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1752752	1762487,1761468,1759639,1759087,1757556,1755028,1754138,1753901,1753670	Gene ID= ENSG00000117984.13 TPM= 435.63 Transcript Type= NA
chr11	1753206	1763941	1753206	1763941	-	ENST00000637387.1@CTSD	ENST00000637387.1	protein_coding	1763792,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1753206	1763941,1761468,1759639,1759087,1757556,1755028,1754138,1753880,1753670	Gene ID= ENSG00000117984.13 TPM= 5.1 Transcript Type= protein_coding
chr11	1753313	1763948	1753313	1763948	-	ENST00000636843.1@CTSD	ENST00000636843.1	protein_coding	1763792,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1753313	1763948,1761468,1759633,1759087,1757556,1755028,1754138,1753901,1753670	Gene ID= ENSG00000117984.13 TPM= 18.17 Transcript Type= protein_coding
chr11	1839481	1841678	1839481	1841678	+	ENST00000381906.5@TNNI2	ENST00000381906.5	protein_coding	1839481,1839675,1839849,1840403,1840528,1840819,1841031,1841456	1839527,1839704,1839855,1840444,1840656,1840908,1841207,1841678	Gene ID= ENSG00000130598.15 TPM= 62.98 Transcript Type= protein_coding
chr11	1838989	1841678	1838989	1841678	+	ENST00000381911.5@TNNI2	ENST00000381911.5	protein_coding	1838989,1839675,1839849,1840403,1840528,1840819,1841031,1841456	1839033,1839704,1839855,1840444,1840656,1840908,1841207,1841678	Gene ID= ENSG00000130598.15 TPM= 461.65 Transcript Type= protein_coding
chr11	1852970	1892263	1852970	1892263	+	ENST00000311604.7@LSP1	ENST00000311604.7	protein_coding	1852970,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773	1853197,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263	Gene ID= ENSG00000130592.15 TPM= 2.09 Transcript Type= protein_coding
chr11	1870244	1892263	1870244	1892263	+	ENST00000406638.6@LSP1	ENST00000406638.6	protein_coding	1870244,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773	1871412,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263	Gene ID= ENSG00000130592.15 TPM= 9.17 Transcript Type= protein_coding
chr11	1868673	1892263	1868673	1892263	+	ENST00000405957.6@LSP1	ENST00000405957.6	protein_coding	1868673,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773	1868986,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263	Gene ID= ENSG00000130592.15 TPM= 9.82 Transcript Type= protein_coding
chr11	1919468	1938706	1919468	1938706	+	transcript412.chr11.nic@TNNT3	transcript412.chr11.nic	protein_coding	1919468,1922857,1923048,1923555,1925099,1925256,1926470,1929810,1932469,1933721,1933931,1934332,1934546,1934829,1936214,1938438	1919762,1922891,1923061,1923572,1925116,1925276,1926481,1929828,1932514,1933837,1934008,1934445,1934655,1934919,1936254,1938706	Gene ID= ENSG00000130595.18 TPM= 474.6 Transcript Type= NA
chr11	1919562	1938706	1919562	1938706	+	ENST00000278317.10@TNNT3	ENST00000278317.10	protein_coding	1919562,1922857,1923048,1923555,1925099,1926695,1929120,1929810,1932469,1933721,1933931,1934332,1934546,1934829,1936963,1938438	1919762,1922891,1923061,1923572,1925116,1926709,1929143,1929828,1932514,1933837,1934008,1934445,1934655,1934919,1937003,1938706	Gene ID= ENSG00000130595.18 TPM= 393.15 Transcript Type= protein_coding
chr11	1919706	1938706	1919706	1938706	+	ENST00000381589.7@TNNT3	ENST00000381589.7	protein_coding	1919706,1922857,1923048,1923555,1925099,1925256,1926470,1929810,1932469,1933721,1933931,1934332,1934546,1934829,1936963,1938438	1919762,1922891,1923061,1923572,1925116,1925276,1926481,1929828,1932514,1933837,1934008,1934445,1934655,1934919,1937003,1938706	Gene ID= ENSG00000130595.18 TPM= 927.99 Transcript Type= protein_coding
chr11	1919706	1938706	1919706	1938706	+	ENST00000381579.7@TNNT3	ENST00000381579.7	protein_coding	1919706,1922857,1923048,1923555,1925099,1926695,1929810,1932469,1933721,1933931,1934332,1934546,1934829,1936214,1938438	1919762,1922891,1923061,1923572,1925116,1926709,1929828,1932514,1933837,1934008,1934445,1934655,1934919,1936254,1938706	Gene ID= ENSG00000130595.18 TPM= 390.95 Transcript Type= protein_coding
chr11	1919706	1938701	1919706	1938701	+	ENST00000381557.6@TNNT3	ENST00000381557.6	protein_coding	1919706,1922857,1923048,1925099,1926695,1929810,1932469,1933721,1933931,1934332,1934546,1934829,1936963,1938438	1919762,1922891,1923061,1925116,1926709,1929828,1932514,1933837,1934008,1934445,1934655,1934919,1937003,1938701	Gene ID= ENSG00000130595.18 TPM= 34.06 Transcript Type= protein_coding
chr11	1919748	1938706	1919748	1938706	+	ENST00000381558.6@TNNT3	ENST00000381558.6	protein_coding	1919748,1921362,1922857,1923048,1923555,1925099,1926695,1929810,1932469,1933721,1933931,1934332,1934546,1934829,1936963,1938438	1919762,1921619,1922891,1923061,1923572,1925116,1926709,1929828,1932514,1933837,1934008,1934445,1934655,1934919,1937003,1938706	Gene ID= ENSG00000130595.18 TPM= 155.36 Transcript Type= protein_coding
chr11	1938200	1938702	1938200	1938702	+	ENST00000473100.1@TNNT3	ENST00000473100.1	protein_coding	1938200,1938438	1938268,1938702	Gene ID= ENSG00000130595.18 TPM= 44.4 Transcript Type= processed_transcript
chr11	1947278	1956609	1947278	1956609	+	ENST00000397298.7@MRPL23	ENST00000397298.7	protein_coding	1947278,1950899,1952127,1952782,1956256	1947379,1951021,1952209,1952855,1956609	Gene ID= ENSG00000214026.10 TPM= 156.38 Transcript Type= protein_coding
chr11	1947341	1962838	1947341	1962838	+	ENST00000381514.7@MRPL23	ENST00000381514.7	protein_coding	1947341,1950899,1952127,1952782,1962239	1947379,1951021,1952209,1952855,1962838	Gene ID= ENSG00000214026.10 TPM= 3.86 Transcript Type= protein_coding
chr11	1961305	1966444	1961305	1966444	-	transcript602.chr11.nnic@NA	transcript602.chr11.nnic	NA	1961305	1966444	Gene ID= novel_gene_chr11_603 TPM= 39.58 Transcript Type= NA
chr11	1966477	1968900	1966477	1968900	-	transcript608.chr11.nnic@NA	transcript608.chr11.nnic	NA	1966477	1968900	Gene ID= novel_gene_chr11_609 TPM= 2.9 Transcript Type= NA
chr11	1970206	1973921	1970206	1973921	-	transcript610.chr11.nnic@NA	transcript610.chr11.nnic	NA	1970206	1973921	Gene ID= novel_gene_chr11_611 TPM= 5.79 Transcript Type= NA
chr11	1972943	1978454	1972943	1978454	+	transcript600.chr11.nnic@NA	transcript600.chr11.nnic	NA	1972943	1978454	Gene ID= novel_gene_chr11_601 TPM= 21.24 Transcript Type= NA
chr11	1995163	1997875	1995163	1997875	-	ENST00000414790.5@H19	ENST00000414790.5	processed_transcript	1996518,1996287,1996079,1995876,1995163	1997875,1996421,1996191,1995998,1995794	Gene ID= ENSG00000130600.17 TPM= 654.48 Transcript Type= lincRNA
chr11	1995176	1997747	1995176	1997747	-	transcript589.chr11.nnic@H19	transcript589.chr11.nnic	processed_transcript	1996518,1996287,1996079,1995176	1997747,1996421,1996191,1995794	Gene ID= ENSG00000130600.17 TPM= 67.57 Transcript Type= NA
chr11	2129112	2137290	2129112	2137290	-	ENST00000381395.5@IGF2	ENST00000381395.5	protein_coding	2137188,2135367,2133517,2129112	2137290,2135529,2133665,2133223	Gene ID= ENSG00000167244.18 TPM= 84.95 Transcript Type= protein_coding
chr11	2129112	2139389	2129112	2139389	-	ENST00000416167.6@IGF2	ENST00000416167.6	protein_coding	2138229,2135367,2133517,2129112	2139389,2135529,2133665,2133223	Gene ID= ENSG00000167244.18 TPM= 89.77 Transcript Type= protein_coding
chr11	2377294	2397419	2377294	2397419	+	ENST00000263645.9@CD81	ENST00000263645.9	protein_coding	2377294,2390412,2394095,2394972,2395416,2395869,2396628,2396804	2377615,2390526,2394192,2395046,2395520,2395970,2396714,2397419	Gene ID= ENSG00000110651.11 TPM= 85.91 Transcript Type= protein_coding
chr11	2400488	2403878	2400488	2403878	+	ENST00000380996.9@TSSC4	ENST00000380996.9	protein_coding	2400488,2402294,2402611,2402845	2400798,2402450,2402652,2403878	Gene ID= ENSG00000184281.14 TPM= 6.11 Transcript Type= protein_coding
chr11	2400536	2403876	2400536	2403876	+	ENST00000333256.10@TSSC4	ENST00000333256.10	protein_coding	2400536,2402294,2402611	2400798,2402450,2403876	Gene ID= ENSG00000184281.14 TPM= 100.23 Transcript Type= protein_coding
chr11	2402293	2403875	2402293	2403875	+	ENST00000451491.2@TSSC4	ENST00000451491.2	protein_coding	2402293,2402611	2402450,2403875	Gene ID= ENSG00000184281.14 TPM= 8.52 Transcript Type= protein_coding
chr11	2696971	2699995	2696971	2699995	-	transcript632.chr11.nnic@NA	transcript632.chr11.nnic	NA	2696971	2699995	Gene ID= novel_gene_chr11_633 TPM= 1.93 Transcript Type= NA
chr11	2883218	2885813	2883218	2885813	-	ENST00000440480.6@CDKN1C	ENST00000440480.6	protein_coding	2885634,2884670,2883999,2883218	2885813,2885466,2884134,2883915	Gene ID= ENSG00000129757.12 TPM= 8.69 Transcript Type= protein_coding
chr11	2883213	2885881	2883213	2885881	-	ENST00000414822.7@CDKN1C	ENST00000414822.7	protein_coding	2884670,2883999,2883213	2885881,2884134,2883915	Gene ID= ENSG00000129757.12 TPM= 3.86 Transcript Type= protein_coding
chr11	2902193	2925246	2902193	2925246	+	ENST00000312221.9@SLC22A18	ENST00000312221.9	protein_coding	2902193,2903214,2908233,2909196,2909578,2916622,2917988,2919307,2922102,2922436,2925010	2902364,2903489,2908330,2909356,2909710,2916740,2918095,2919407,2922203,2922556,2925246	Gene ID= ENSG00000110628.13 TPM= 2.9 Transcript Type= protein_coding
chr11	2944437	2992377	2944437	2992377	-	ENST00000380542.8@NAP1L4	ENST00000380542.8	protein_coding	2992254,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2949227,2944437	2992377,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2949264,2945646	Gene ID= ENSG00000205531.12 TPM= 43.2 Transcript Type= protein_coding
chr11	2944431	2992115	2944431	2992115	-	transcript679.chr11.nic@NAP1L4	transcript679.chr11.nic	protein_coding	2991794,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2944431	2992115,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2945646	Gene ID= ENSG00000205531.12 TPM= 14.89 Transcript Type= NA
chr11	2944431	2992377	2944431	2992377	-	ENST00000620138.4@NAP1L4	ENST00000620138.4	protein_coding	2992254,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2944431	2992377,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2945646	Gene ID= ENSG00000205531.12 TPM= 162.58 Transcript Type= protein_coding
chr11	3000930	3057453	3000930	3057453	-	transcript688.chr11.nic@CARS	transcript688.chr11.nic	protein_coding	3057343,3047753,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001962,3000930	3057453,3048001,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 5.79 Transcript Type= NA
chr11	3000930	3057433	3000930	3057433	-	transcript692.chr11.nic@CARS	transcript692.chr11.nic	protein_coding	3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001962,3000930	3057433,3042256,3041031,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 3.86 Transcript Type= NA
chr11	3000929	3057418	3000929	3057418	-	ENST00000278224.13@CARS	ENST00000278224.13	protein_coding	3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001962,3000929	3057418,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 17.57 Transcript Type= protein_coding
chr11	3000922	3057613	3000922	3057613	-	ENST00000397111.9@CARS	ENST00000397111.9	protein_coding	3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001970,3000922	3057613,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 44.92 Transcript Type= protein_coding
chr11	3000922	3057437	3000922	3057437	-	ENST00000380525.8@CARS	ENST00000380525.8	protein_coding	3057343,3047753,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001970,3000922	3057437,3048001,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 18.66 Transcript Type= protein_coding
chr11	3055167	3057435	3055167	3057435	-	transcript711.chr11.nnic@NA	transcript711.chr11.nnic	NA	3055167	3057435	Gene ID= novel_gene_chr11_712 TPM= 2.9 Transcript Type= NA
chr11	3087116	3165354	3087116	3165354	-	ENST00000263650.11@OSBPL5	ENST00000263650.11	protein_coding	3165216,3129013,3126473,3122348,3121997,3120421,3119547,3107771,3107263,3104193,3103239,3102183,3101603,3100158,3094237,3093746,3093527,3092867,3092432,3090558,3089846,3087116	3165354,3129169,3126555,3122428,3122098,3120624,3119631,3107945,3107455,3104377,3103320,3102281,3101699,3100256,3094334,3093835,3093663,3093052,3092558,3090696,3089948,3088343	Gene ID= ENSG00000021762.19 TPM= 9.65 Transcript Type= protein_coding
chr11	3359117	3379187	3359117	3379187	-	transcript727.chr11.nic@ZNF195	transcript727.chr11.nic	protein_coding	3379038,3371577,3370975,3362546,3361743,3359117	3379187,3371703,3371070,3362602,3361889,3360565	Gene ID= ENSG00000005801.16 TPM= 2.9 Transcript Type= NA
chr11	3359117	3379146	3359117	3379146	-	ENST00000526601.5@ZNF195	ENST00000526601.5	protein_coding	3379038,3373577,3371577,3370975,3361743,3359117	3379146,3373656,3371703,3371070,3361889,3360565	Gene ID= ENSG00000005801.16 TPM= 1.93 Transcript Type= protein_coding
chr11	3638503	3642255	3638503	3642255	-	ENST00000397068.7@ART5	ENST00000397068.7	protein_coding	3641806,3639642,3639003,3638503	3642255,3640371,3639035,3638793	Gene ID= ENSG00000167311.13 TPM= 1.93 Transcript Type= protein_coding
chr11	3645115	3668531	3645115	3668531	+	transcript744.chr11.nic@ART1	transcript744.chr11.nic	protein_coding	3645115,3655504,3659162,3659583,3661372,3664092	3645179,3655655,3659276,3660363,3661413,3668531	Gene ID= ENSG00000129744.2 TPM= 31.86 Transcript Type= NA
chr11	3645118	3668531	3645118	3668531	+	transcript751.chr11.nnic@ART1	transcript751.chr11.nnic	protein_coding	3645118,3661372,3664092	3645179,3661413,3668531	Gene ID= ENSG00000129744.2 TPM= 17.38 Transcript Type= NA
chr11	3675010	3797792	3675010	3797792	-	ENST00000324932.11@NUP98	ENST00000324932.11	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760539,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3712564,3706445,3705200,3702463,3700610,3699082,3695449,3693232,3691347,3685973,3683200,3679554,3676509,3675010	3797792,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728,3706627,3705356,3702892,3700839,3699348,3695606,3693375,3691489,3686194,3683441,3679708,3676620,3676376	Gene ID= ENSG00000110713.15 TPM= 5.31 Transcript Type= protein_coding
chr11	3711835	3797572	3711835	3797572	-	transcript762.chr11.nic@NUP98	transcript762.chr11.nic	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760563,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3711835	3797572,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728	Gene ID= ENSG00000110713.15 TPM= 8.69 Transcript Type= NA
chr11	3711835	3797572	3711835	3797572	-	transcript767.chr11.nic@NUP98	transcript767.chr11.nic	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760539,3753316,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3711835	3797572,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728	Gene ID= ENSG00000110713.15 TPM= 4.83 Transcript Type= NA
chr11	3675011	3797792	3675011	3797792	-	ENST00000359171.8@NUP98	ENST00000359171.8	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760488,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3712564,3706445,3705200,3702463,3700610,3699082,3695449,3693232,3691347,3685973,3683200,3679554,3676509,3675011	3797792,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728,3706627,3705356,3702892,3700839,3699348,3695606,3693375,3691489,3686194,3683441,3679708,3676620,3676376	Gene ID= ENSG00000110713.15 TPM= 5.31 Transcript Type= protein_coding
chr11	3711553	3797541	3711553	3797541	-	ENST00000397004.8@NUP98	ENST00000397004.8	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760539,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3711553	3797541,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728	Gene ID= ENSG00000110713.15 TPM= 4.83 Transcript Type= protein_coding
chr11	3711835	3797547	3711835	3797547	-	ENST00000397007.8@NUP98	ENST00000397007.8	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760488,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3711835	3797547,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728	Gene ID= ENSG00000110713.15 TPM= 25.1 Transcript Type= protein_coding
chr11	3826978	3840983	3826978	3840983	-	ENST00000351018.4@RHOG	ENST00000351018.4	protein_coding	3840894,3826978	3840983,3828206	Gene ID= ENSG00000177105.9 TPM= 62.75 Transcript Type= protein_coding
chr11	3855142	4093209	3855142	4093209	+	transcript782.chr11.nnic@STIM1	transcript782.chr11.nnic	protein_coding	3855142,3855645,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4084673,4086477,4091282	3855450,3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4084765,4086543,4093209	Gene ID= ENSG00000167323.11 TPM= 12.68 Transcript Type= NA
chr11	3855142	4083654	3855142	4083654	+	transcript794.chr11.nnic@STIM1	transcript794.chr11.nnic	protein_coding	3855142,3855645,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263	3855450,3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083654	Gene ID= ENSG00000167323.11 TPM= 11.42 Transcript Type= NA
chr11	3855702	4093209	3855702	4093209	+	ENST00000300737.8@STIM1	ENST00000300737.8	protein_coding	3855702,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4086477,4091282	3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4086543,4093209	Gene ID= ENSG00000167323.11 TPM= 54.19 Transcript Type= protein_coding
chr11	3855703	4093210	3855703	4093210	+	ENST00000616714.4@STIM1	ENST00000616714.4	protein_coding	3855703,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4086477,4091282	3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4086861,4093210	Gene ID= ENSG00000167323.11 TPM= 29.09 Transcript Type= protein_coding
chr11	3857097	3864943	3857097	3864943	-	transcript808.chr11.nnic@NA	transcript808.chr11.nnic	NA	3863240,3860279,3857097	3864943,3862818,3858113	Gene ID= novel_gene_chr11_809 TPM= 2.9 Transcript Type= NA
chr11	4080469	4084193	4080469	4084193	-	transcript812.chr11.nnic@NA	transcript812.chr11.nnic	NA	4080469	4084193	Gene ID= novel_gene_chr11_813 TPM= 3.38 Transcript Type= NA
chr11	4094809	4138876	4094809	4138876	+	ENST00000300738.9@RRM1	ENST00000300738.9	protein_coding	4094809,4101993,4106046,4107435,4109644,4111601,4111900,4118320,4119845,4121604,4122141,4123183,4126684,4127035,4129074,4132286,4133563,4135082,4138195	4095031,4102081,4106223,4107535,4109703,4111640,4112062,4118461,4119928,4121765,4122220,4123384,4126833,4127256,4129150,4132421,4133658,4135270,4138876	Gene ID= ENSG00000167325.14 TPM= 22.68 Transcript Type= protein_coding
chr11	4094799	4138870	4094799	4138870	+	ENST00000532170.5@RRM1	ENST00000532170.5	protein_coding	4094799,4101993,4105606,4106046,4107435,4109644,4111601,4111900,4118320,4119845,4121604,4122141,4123183,4126684,4127035,4129074,4132286,4133563,4135082,4138195	4095031,4102081,4105691,4106223,4107535,4109703,4111640,4112062,4118461,4119928,4121765,4122220,4123384,4126833,4127256,4129150,4132421,4133658,4135270,4138870	Gene ID= ENSG00000167325.14 TPM= 3.38 Transcript Type= nonsense_mediated_decay
chr11	4384902	4393696	4384902	4393696	-	ENST00000254436.7@TRIM21	ENST00000254436.7	protein_coding	4393633,4390002,4389654,4388300,4386968,4386157,4384902	4393696,4390458,4389749,4388530,4386990,4386257,4385853	Gene ID= ENSG00000132109.9 TPM= 3.86 Transcript Type= protein_coding
chr11	4598672	4608259	4598672	4608259	-	ENST00000300747.9@TRIM68	ENST00000300747.9	protein_coding	4608027,4605079,4603245,4602152,4601664,4601027,4598672	4608259,4605561,4603340,4602412,4601686,4601127,4600826	Gene ID= ENSG00000167333.12 TPM= 16.41 Transcript Type= protein_coding
chr11	4643420	4655488	4643420	4655488	+	ENST00000396952.5@OR51E1	ENST00000396952.5	protein_coding	4643420,4652488	4644030,4655488	Gene ID= ENSG00000180785.9 TPM= 2.9 Transcript Type= protein_coding
chr11	5225464	5227071	5225464	5227071	-	ENST00000335295.4@HBB	ENST00000335295.4	protein_coding	5226930,5226577,5225464	5227071,5226799,5225726	Gene ID= ENSG00000244734.3 TPM= 1.93 Transcript Type= protein_coding
chr11	5689689	5710863	5689689	5710863	+	ENST00000379965.7@TRIM22	ENST00000379965.7	protein_coding	5689689,5696167,5697248,5698315,5706594,5708173,5708577,5709053	5689899,5696655,5697343,5698545,5706616,5708273,5708603,5710863	Gene ID= ENSG00000132274.15 TPM= 5.79 Transcript Type= protein_coding
chr11	6211335	6234616	6211335	6234616	-	ENST00000449352.6@FAM160A2	ENST00000449352.6	protein_coding	6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218600,6217371,6214733,6214411,6211335	6234616,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214911,6214573,6211867	Gene ID= ENSG00000051009.10 TPM= 18.34 Transcript Type= protein_coding
chr11	6318946	6320523	6318946	6320523	-	transcript841.chr11.nnic@NA	transcript841.chr11.nnic	NA	6318946	6320523	Gene ID= novel_gene_chr11_842 TPM= 4.83 Transcript Type= NA
chr11	6318946	6320647	6318946	6320647	-	ENST00000303927.3@CAVIN3	ENST00000303927.3	protein_coding	6320093,6318946	6320647,6319564	Gene ID= ENSG00000170955.9 TPM= 20.27 Transcript Type= protein_coding
chr11	6390431	6394995	6390431	6394995	+	ENST00000342245.8@SMPD1	ENST00000342245.8	protein_coding	6390431,6391384,6393216,6393617,6393896,6394198	6390916,6392156,6393387,6393693,6394041,6394995	Gene ID= ENSG00000166311.9 TPM= 20.27 Transcript Type= protein_coding
chr11	6395125	6419101	6395125	6419101	-	transcript846.chr11.nnic@APBB1	transcript846.chr11.nnic	protein_coding	6418985,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6398693,6396100,6395786,6395125	6419101,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6398749,6396215,6395962,6395701	Gene ID= ENSG00000166313.18 TPM= 10.06 Transcript Type= NA
chr11	6395125	6419070	6395125	6419070	-	ENST00000299402.10@APBB1	ENST00000299402.10	protein_coding	6418985,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395125	6419070,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701	Gene ID= ENSG00000166313.18 TPM= 58.48 Transcript Type= protein_coding
chr11	6395125	6419414	6395125	6419414	-	ENST00000311051.7@APBB1	ENST00000311051.7	protein_coding	6419346,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395125	6419414,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701	Gene ID= ENSG00000166313.18 TPM= 24.69 Transcript Type= protein_coding
chr11	6395125	6419071	6395125	6419071	-	ENST00000608435.5@APBB1	ENST00000608435.5	protein_coding	6418985,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401977,6401574,6401345,6400989,6396100,6395786,6395125	6419071,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401982,6401688,6401429,6401072,6396215,6395962,6395279	Gene ID= ENSG00000166313.18 TPM= 1.13 Transcript Type= non_stop_decay
chr11	6448617	6473984	6448617	6473984	-	ENST00000359518.7@TRIM3	ENST00000359518.7	protein_coding	6473791,6473084,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6450551,6449306,6448617	6473984,6473248,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449446,6449180	Gene ID= ENSG00000110171.19 TPM= 3.7 Transcript Type= protein_coding
chr11	6448615	6473984	6448615	6473984	-	ENST00000345851.7@TRIM3	ENST00000345851.7	protein_coding	6473791,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6450551,6449306,6448615	6473984,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449446,6449180	Gene ID= ENSG00000110171.19 TPM= 30.73 Transcript Type= protein_coding
chr11	6448615	6473960	6448615	6473960	-	transcript880.chr11.nic@TRIM3	transcript880.chr11.nic	protein_coding	6473791,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6449306,6448615	6473960,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449180	Gene ID= ENSG00000110171.19 TPM= 5.15 Transcript Type= NA
chr11	6476519	6481356	6476519	6481356	-	transcript887.chr11.nic@ARFIP2	transcript887.chr11.nic	protein_coding	6481231,6479972,6479140,6478738,6478579,6478041,6477718,6476519	6481356,6480068,6479258,6478959,6478652,6478198,6477892,6477268	Gene ID= ENSG00000132254.12 TPM= 1.93 Transcript Type= NA
chr11	6476519	6481436	6476519	6481436	-	ENST00000396777.7@ARFIP2	ENST00000396777.7	protein_coding	6481231,6480323,6479972,6479140,6478738,6478041,6477718,6476519	6481436,6480463,6480068,6479258,6478959,6478198,6477892,6477268	Gene ID= ENSG00000132254.12 TPM= 7.72 Transcript Type= protein_coding
chr11	6475680	6481312	6475680	6481312	-	ENST00000254584.6@ARFIP2	ENST00000254584.6	protein_coding	6481231,6480323,6479972,6479140,6478738,6478041,6477718,6475680	6481312,6480423,6480068,6479258,6478959,6478198,6477892,6477268	Gene ID= ENSG00000132254.12 TPM= 1.93 Transcript Type= protein_coding
chr11	6481447	6484679	6481447	6484679	+	ENST00000254616.10@TIMM10B	ENST00000254616.10	protein_coding	6481447,6481757,6482045	6481555,6481852,6484679	Gene ID= ENSG00000132286.11 TPM= 39.58 Transcript Type= protein_coding
chr11	6599920	6603630	6599920	6603630	-	transcript902.chr11.nic@RRP8	transcript902.chr11.nic	protein_coding	6603404,6601852,6601149,6600926,6600669,6600486,6599920	6603630,6602264,6601602,6601055,6600775,6600582,6600265	Gene ID= ENSG00000132275.10 TPM= 2.9 Transcript Type= NA
chr11	6599920	6603665	6599920	6603665	-	transcript907.chr11.nnic@RRP8	transcript907.chr11.nnic	protein_coding	6603404,6601852,6601149,6600669,6600486,6599920	6603665,6602215,6601602,6600775,6600582,6600265	Gene ID= ENSG00000132275.10 TPM= 3.86 Transcript Type= NA
chr11	6496506	6603638	6496506	6603638	-	transcript921.chr11.nnic@RRP8	transcript921.chr11.nnic	protein_coding	6603404,6592720,6496506	6603638,6592823,6498939	Gene ID= ENSG00000132275.10 TPM= 2.9 Transcript Type= NA
chr11	6599920	6603579	6599920	6603579	-	ENST00000534343.1@RRP8	ENST00000534343.1	protein_coding	6603404,6600669,6600486,6599920	6603579,6600775,6600582,6600265	Gene ID= ENSG00000132275.10 TPM= 2.9 Transcript Type= protein_coding
chr11	6541504	6543983	6541504	6543983	+	transcript925.chr11.nnic@NA	transcript925.chr11.nnic	NA	6541504	6543983	Gene ID= novel_gene_chr11_926 TPM= 7.72 Transcript Type= NA
chr11	6592368	6594873	6592368	6594873	-	transcript929.chr11.nnic@NA	transcript929.chr11.nnic	NA	6592368	6594873	Gene ID= novel_gene_chr11_930 TPM= 1.93 Transcript Type= NA
chr11	6603731	6610870	6603731	6610870	+	ENST00000299421.8@ILK	ENST00000299421.8	protein_coding	6603731,6604180,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610870	Gene ID= ENSG00000166333.13 TPM= 45.21 Transcript Type= protein_coding
chr11	6603708	6610874	6603708	6610874	+	ENST00000532063.5@ILK	ENST00000532063.5	protein_coding	6603708,6604226,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610874	Gene ID= ENSG00000166333.13 TPM= 11.42 Transcript Type= protein_coding
chr11	6603758	6610833	6603758	6610833	+	ENST00000420936.6@ILK	ENST00000420936.6	protein_coding	6603758,6604226,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610833	Gene ID= ENSG00000166333.13 TPM= 155.9 Transcript Type= protein_coding
chr11	6603744	6610835	6603744	6610835	+	ENST00000537806.5@ILK	ENST00000537806.5	protein_coding	6603744,6604226,6608046,6608394,6608694,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608211,6608489,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610835	Gene ID= ENSG00000166333.13 TPM= 1.93 Transcript Type= protein_coding
chr11	6603754	6606014	6603754	6606014	+	transcript927.chr11.nnic@NA	transcript927.chr11.nnic	NA	6603754	6606014	Gene ID= novel_gene_chr11_928 TPM= 1.93 Transcript Type= NA
chr11	6610845	6612251	6610845	6612251	-	transcript910.chr11.nnic@TAF10	transcript910.chr11.nnic	protein_coding	6611958,6611535,6611388,6611189,6610845	6612251,6611818,6611452,6611303,6611011	Gene ID= ENSG00000166337.9 TPM= 5.55 Transcript Type= NA
chr11	6610842	6612667	6610842	6612667	-	ENST00000299424.8@TAF10	ENST00000299424.8	protein_coding	6611958,6611664,6611388,6611189,6610842	6612667,6611818,6611452,6611303,6611011	Gene ID= ENSG00000166337.9 TPM= 96.29 Transcript Type= protein_coding
chr11	6610845	6612218	6610845	6612218	-	transcript912.chr11.nnic@TAF10	transcript912.chr11.nnic	protein_coding	6612064,6611664,6611388,6611189,6610845	6612218,6611818,6611452,6611303,6611011	Gene ID= ENSG00000166337.9 TPM= 5.07 Transcript Type= NA
chr11	6606296	6610771	6606296	6610771	-	transcript924.chr11.nnic@TAF10	transcript924.chr11.nnic	protein_coding	6609908,6606296	6610771,6608725	Gene ID= ENSG00000166337.9 TPM= 1.93 Transcript Type= NA
chr11	6612763	6619461	6612763	6619461	-	ENST00000299427.10@TPP1	ENST00000299427.10	protein_coding	6619384,6619196,6618776,6617626,6617301,6616975,6616661,6616315,6616005,6615442,6615171,6614866,6612763	6619461,6619267,6618915,6617776,6617428,6617153,6616859,6616503,6616074,6615562,6615329,6614991,6614686	Gene ID= ENSG00000166340.15 TPM= 10.62 Transcript Type= protein_coding
chr11	6680782	6683401	6680782	6683401	-	ENST00000288937.6@MRPL17	ENST00000288937.6	protein_coding	6683123,6682747,6680782	6683401,6682815,6682402	Gene ID= ENSG00000158042.8 TPM= 3.86 Transcript Type= protein_coding
chr11	7485482	7511377	7485482	7511377	+	ENST00000329293.3@OLFML1	ENST00000329293.3	protein_coding	7485482,7488127,7509398	7486004,7488415,7511377	Gene ID= ENSG00000183801.7 TPM= 1.93 Transcript Type= protein_coding
chr11	7513939	7657186	7513939	7657186	+	transcript943.chr11.nic@PPFIBP2	transcript943.chr11.nic	protein_coding	7513939,7549440,7565553,7593132,7597560,7610291,7620935,7625777,7628285,7629459,7630925,7632867,7634495,7635552,7639732,7641033,7641479,7642298,7648387,7648800,7649147,7649532,7650840,7651656,7653024,7655433,7656727	7514121,7549539,7565767,7593224,7597673,7610422,7621027,7625891,7628346,7629534,7631028,7632934,7634552,7635593,7639870,7641065,7641620,7642426,7648537,7648911,7649235,7649654,7650965,7651844,7653200,7655498,7657186	Gene ID= ENSG00000166387.11 TPM= 2.9 Transcript Type= NA
chr11	7673594	7675058	7673594	7675058	+	transcript947.chr11.nnic@NA	transcript947.chr11.nnic	NA	7673594	7675058	Gene ID= novel_gene_chr11_948 TPM= 1.93 Transcript Type= NA
chr11	7987320	7996169	7987320	7996169	+	ENST00000309828.4@EIF3F	ENST00000309828.4	protein_coding	7987320,7991781,7992084,7992887,7994426,7994982,7995254,7995945	7987716,7991851,7992163,7993024,7994517,7995118,7995367,7996169	Gene ID= ENSG00000175390.13 TPM= 335.93 Transcript Type= protein_coding
chr11	8168583	8169728	8168583	8169728	+	transcript963.chr11.nnic@NA	transcript963.chr11.nnic	NA	8168583	8169728	Gene ID= novel_gene_chr11_964 TPM= 1.93 Transcript Type= NA
chr11	8224304	8262882	8224304	8262882	-	transcript965.chr11.nnic@LMO1	transcript965.chr11.nnic	protein_coding	8262758,8230291,8226975,8224304	8262882,8230504,8227100,8224721	Gene ID= ENSG00000166407.13 TPM= 3.86 Transcript Type= NA
chr11	8224304	8263858	8224304	8263858	-	ENST00000335790.7@LMO1	ENST00000335790.7	protein_coding	8263338,8230291,8226975,8224304	8263858,8230504,8227100,8224721	Gene ID= ENSG00000166407.13 TPM= 5.79 Transcript Type= protein_coding
chr11	8682411	8689872	8682411	8689872	+	ENST00000314138.10@RPL27A	ENST00000314138.10	protein_coding	8682411,8683202,8684006,8684718,8685678	8682816,8683265,8684081,8684892,8689872	Gene ID= ENSG00000166441.12 TPM= 1.93 Transcript Type= protein_coding
chr11	8682792	8685848	8682792	8685848	+	ENST00000532359.5@RPL27A	ENST00000532359.5	protein_coding	8682792,8683202,8684006,8684823,8685678	8682816,8683265,8684081,8684892,8685848	Gene ID= ENSG00000166441.12 TPM= 8.69 Transcript Type= protein_coding
chr11	8911140	8920084	8911140	8920084	+	ENST00000309377.8@AKIP1	ENST00000309377.8	protein_coding	8911140,8911444,8912453,8914826,8917287,8919337	8911223,8911671,8912533,8914930,8917367,8920084	Gene ID= ENSG00000166452.11 TPM= 8.21 Transcript Type= protein_coding
chr11	8911139	8920084	8911139	8920084	+	ENST00000299576.9@AKIP1	ENST00000299576.9	protein_coding	8911139,8911444,8914826,8917287,8919337	8911223,8911671,8914930,8917367,8920084	Gene ID= ENSG00000166452.11 TPM= 10.14 Transcript Type= protein_coding
chr11	8947501	8965011	8947501	8965011	-	ENST00000525069.5@TMEM9B	ENST00000525069.5	protein_coding	8964890,8962092,8956190,8953203,8947501	8965011,8962183,8956298,8953337,8948475	Gene ID= ENSG00000175348.10 TPM= 1.93 Transcript Type= protein_coding
chr11	8947294	8964773	8947294	8964773	-	ENST00000534025.5@TMEM9B	ENST00000534025.5	protein_coding	8964209,8962092,8956190,8953203,8947294	8964773,8962183,8956298,8953337,8948475	Gene ID= ENSG00000175348.10 TPM= 57.44 Transcript Type= protein_coding
chr11	8947294	8964441	8947294	8964441	-	ENST00000309134.9@TMEM9B	ENST00000309134.9	protein_coding	8964209,8956190,8953203,8947294	8964441,8956298,8953337,8948475	Gene ID= ENSG00000175348.10 TPM= 5.31 Transcript Type= protein_coding
chr11	9138825	9265390	9138825	9265390	-	ENST00000328194.7@DENND5A	ENST00000328194.7	protein_coding	9264961,9207561,9206673,9203660,9193494,9180767,9178858,9178132,9170627,9169856,9165836,9160713,9152358,9150680,9150081,9147030,9145670,9144995,9144097,9143403,9142722,9141940,9138825	9265390,9207632,9206782,9204317,9193681,9181084,9179073,9178366,9170777,9169949,9165967,9160865,9152442,9150764,9150209,9147151,9145815,9145113,9144278,9143485,9142845,9142108,9139854	Gene ID= ENSG00000184014.7 TPM= 17.38 Transcript Type= protein_coding
chr11	9280671	9314780	9280671	9314780	-	ENST00000528080.5@TMEM41B	ENST00000528080.5	protein_coding	9314321,9299584,9295259,9288442,9287702,9286455,9280671	9314780,9299701,9295387,9288535,9287806,9286593,9283593	Gene ID= ENSG00000166471.10 TPM= 27.99 Transcript Type= protein_coding
chr11	9384652	9442148	9384652	9442148	+	transcript1021.chr11.nic@IPO7	transcript1021.chr11.nic	protein_coding	9384652,9403290,9408486,9409928,9414255,9417059,9420411,9420614,9423006,9423777,9424914,9425146,9428540,9429031,9429674,9430875,9433570,9433721,9434934,9436271,9437754,9438080,9440455,9442081	9384847,9403371,9408639,9410086,9414411,9417148,9420505,9420698,9423140,9423876,9424990,9425262,9428629,9429196,9429834,9431003,9433636,9433846,9435031,9436366,9437974,9438285,9440661,9442148	Gene ID= ENSG00000205339.9 TPM= 2.9 Transcript Type= NA
chr11	9384622	9448126	9384622	9448126	+	ENST00000379719.7@IPO7	ENST00000379719.7	protein_coding	9384622,9403290,9408486,9409928,9414255,9417059,9420411,9420614,9423006,9423777,9424914,9425146,9428540,9429031,9429674,9430875,9433570,9433721,9434934,9436271,9437754,9438080,9440455,9442081,9445097	9384847,9403371,9408639,9410086,9414411,9417148,9420505,9420698,9423140,9423876,9424990,9425262,9428629,9429196,9429834,9431003,9433636,9433846,9435031,9436366,9437974,9438285,9440661,9442197,9448126	Gene ID= ENSG00000205339.9 TPM= 44.4 Transcript Type= protein_coding
chr11	9459556	9460702	9459556	9460702	-	ENST00000596206.2@AC132192.2	ENST00000596206.2	antisense_RNA	9459556	9460702	Gene ID= ENSG00000268403.2 TPM= 3.86 Transcript Type= antisense_RNA
chr11	9460965	9528524	9460965	9528524	+	ENST00000396602.6@ZNF143	ENST00000396602.6	protein_coding	9460965,9471302,9472677,9473941,9474550,9478390,9479472,9494646,9496303,9497675,9501091,9508619,9512448,9516201,9525240,9527530	9461076,9471420,9472769,9474024,9474633,9478586,9479546,9494765,9496378,9497800,9501270,9508846,9512596,9516362,9525386,9528524	Gene ID= ENSG00000166478.9 TPM= 16.41 Transcript Type= protein_coding
chr11	9460970	9528054	9460970	9528054	+	transcript1043.chr11.nnic@ZNF143	transcript1043.chr11.nnic	protein_coding	9460970,9471302,9472677,9473941,9474550,9478390,9479472,9494646,9496303,9497675,9508619,9512448,9516201,9525240,9527530	9461076,9471420,9472769,9474024,9474633,9478586,9479546,9494765,9496378,9497800,9508846,9512596,9516362,9525386,9528054	Gene ID= ENSG00000166478.9 TPM= 1.93 Transcript Type= NA
chr11	9575544	9589748	9575544	9589748	+	transcript1050.chr11.nic@WEE1	transcript1050.chr11.nic	protein_coding	9575544,9576230,9576487,9577142,9581532,9585258,9585442,9586449,9586711,9588449	9576093,9576293,9576659,9577263,9581678,9585353,9585527,9586619,9586856,9589748	Gene ID= ENSG00000166483.10 TPM= 1.93 Transcript Type= NA
chr11	9573681	9589207	9573681	9589207	+	ENST00000450114.6@WEE1	ENST00000450114.6	protein_coding	9573681,9575888,9576230,9576487,9577142,9581532,9585258,9585442,9586449,9586711,9588449	9574509,9576093,9576293,9576659,9577263,9581678,9585353,9585527,9586619,9586856,9589207	Gene ID= ENSG00000166483.10 TPM= 1.93 Transcript Type= protein_coding
chr11	9664077	9752991	9664077	9752991	+	ENST00000318950.10@SWAP70	ENST00000318950.10	protein_coding	9664077,9694146,9713466,9724658,9728053,9729343,9732529,9738213,9740181,9747858,9749087,9749864	9664278,9694286,9713639,9724885,9728199,9729451,9732710,9738320,9740347,9748056,9749183,9752991	Gene ID= ENSG00000133789.14 TPM= 6.27 Transcript Type= protein_coding
chr11	9664077	9751821	9664077	9751821	+	ENST00000447399.6@SWAP70	ENST00000447399.6	protein_coding	9664077,9694146,9724658,9728053,9729343,9732529,9738213,9740181,9747858,9749087,9749864	9664278,9694286,9724885,9728199,9729451,9732710,9738320,9740347,9748056,9749183,9751821	Gene ID= ENSG00000133789.14 TPM= 1.45 Transcript Type= protein_coding
chr11	9664135	9741953	9664135	9741953	+	ENST00000524817.5@SWAP70	ENST00000524817.5	protein_coding	9664135,9694146,9713466,9724658,9728053,9729343,9732529,9738213,9740181	9664278,9694286,9713639,9724885,9728199,9729451,9732710,9738320,9741953	Gene ID= ENSG00000133789.14 TPM= 1.93 Transcript Type= retained_intron
chr11	10304680	10307397	10304680	10307397	+	ENST00000278175.9@ADM	ENST00000278175.9	protein_coding	10304680,10305680,10305949,10306332	10305229,10305798,10306098,10307397	Gene ID= ENSG00000148926.9 TPM= 13.51 Transcript Type= protein_coding
chr11	10305073	10307395	10305073	10307395	+	ENST00000534464.1@ADM	ENST00000534464.1	protein_coding	10305073,10305680,10306332	10305229,10306098,10307395	Gene ID= ENSG00000148926.9 TPM= 1.93 Transcript Type= protein_coding
chr11	10305619	10308044	10305619	10308044	+	transcript1063.chr11.nnic@NA	transcript1063.chr11.nnic	NA	10305619	10308044	Gene ID= novel_gene_chr11_1064 TPM= 1.93 Transcript Type= NA
chr11	10455320	10507126	10455320	10507126	+	ENST00000396553.6@AMPD3	ENST00000396553.6	protein_coding	10455320,10461515,10478526,10482063,10484820,10487235,10493349,10494899,10495570,10496812,10500086,10501470,10502721,10504549,10505708	10455448,10461740,10478730,10482225,10485039,10487364,10493543,10495030,10495733,10496938,10500249,10501590,10502894,10504659,10507126	Gene ID= ENSG00000133805.15 TPM= 55.99 Transcript Type= protein_coding
chr11	10509895	10513060	10509895	10513060	+	transcript1089.chr11.nnic@NA	transcript1089.chr11.nnic	NA	10509895	10513060	Gene ID= novel_gene_chr11_1090 TPM= 1.93 Transcript Type= NA
chr11	10511678	10541217	10511678	10541217	-	ENST00000265981.6@RNF141	ENST00000265981.6	protein_coding	10541122,10534016,10530643,10525192,10519034,10511678	10541217,10534205,10530751,10525373,10519141,10515066	Gene ID= ENSG00000110315.6 TPM= 2.9 Transcript Type= protein_coding
chr11	10518834	10521382	10518834	10521382	+	transcript1091.chr11.nnic@NA	transcript1091.chr11.nnic	NA	10518834	10521382	Gene ID= novel_gene_chr11_1092 TPM= 1.93 Transcript Type= NA
chr11	10575760	10693514	10575760	10693514	-	transcript1098.chr11.nnic@MRVI1	transcript1098.chr11.nnic	protein_coding	10693462,10633968,10631991,10629538,10628751,10627973,10627716,10625966,10623778,10609728,10606742,10604405,10603120,10600918,10594146,10593492,10591548,10581867,10580455,10575760	10693514,10634071,10632061,10629711,10628828,10628025,10627760,10626583,10623856,10609851,10606772,10604545,10603251,10601059,10594195,10593599,10591612,10581986,10580589,10576575	Gene ID= ENSG00000072952.18 TPM= 1.93 Transcript Type= NA
chr11	10751209	10779743	10751209	10779743	+	transcript1101.chr11.nnic@CTR9	transcript1101.chr11.nnic	protein_coding	10751209,10752672,10754958,10755678,10756749,10760173,10761947,10763431,10763643,10764112,10764308,10764548,10766402,10767806,10768074,10768343,10770210,10770487,10772520,10773127,10774012,10775207,10775521,10778679	10751457,10752770,10755197,10755795,10756838,10760321,10762054,10763538,10763879,10764201,10764436,10764731,10766490,10767991,10768161,10768491,10770326,10770632,10772655,10773273,10774169,10775303,10775633,10779743	Gene ID= ENSG00000198730.7 TPM= 1.93 Transcript Type= NA
chr11	10751218	10774151	10751218	10774151	+	transcript1104.chr11.nic@CTR9	transcript1104.chr11.nic	protein_coding	10751218,10752672,10754958,10755678,10756749,10760173,10761947,10763431,10763643,10764112,10764308,10764548,10766402,10767806,10768074,10768343,10770210,10770487,10771545,10772520,10773127,10774012	10751457,10752770,10755197,10755795,10756838,10760321,10762054,10763538,10763879,10764201,10764436,10764731,10766490,10767991,10768161,10768491,10770326,10770632,10771616,10772655,10773273,10774151	Gene ID= ENSG00000198730.7 TPM= 2.9 Transcript Type= NA
chr11	10750987	10779743	10750987	10779743	+	ENST00000361367.6@CTR9	ENST00000361367.6	protein_coding	10750987,10752672,10754958,10755678,10756749,10760173,10761947,10763431,10763643,10764112,10764308,10764548,10766402,10767806,10768074,10768343,10770210,10770487,10771545,10772520,10773127,10774012,10775207,10775521,10778679	10751457,10752770,10755197,10755795,10756838,10760321,10762054,10763538,10763879,10764201,10764436,10764731,10766490,10767991,10768161,10768491,10770326,10770632,10771616,10772655,10773273,10774169,10775303,10775633,10779743	Gene ID= ENSG00000198730.7 TPM= 32.82 Transcript Type= protein_coding
chr11	10797054	10809110	10797054	10809110	-	ENST00000339995.9@EIF4G2	ENST00000339995.9	protein_coding	10808705,10807255,10806820,10805907,10804913,10804287,10804137,10803899,10803480,10803211,10803030,10802294,10802049,10801661,10800962,10800731,10800432,10800090,10799552,10799213,10798992,10797054	10809110,10807381,10806885,10806047,10805015,10804418,10804203,10804050,10803590,10803294,10803128,10802435,10802209,10801774,10801087,10800835,10800647,10800348,10799756,10799424,10799113,10797881	Gene ID= ENSG00000110321.16 TPM= 402.37 Transcript Type= protein_coding
chr11	10852704	10858073	10852704	10858073	-	ENST00000432999.6@ZBED5	ENST00000432999.6	protein_coding	10857862,10856144,10852704	10858073,10856257,10855118	Gene ID= ENSG00000236287.7 TPM= 1.93 Transcript Type= protein_coding
chr11	10854619	10858796	10854619	10858796	-	ENST00000526020.5@ZBED5	ENST00000526020.5	protein_coding	10857862,10856144,10854619	10858796,10856257,10855081	Gene ID= ENSG00000236287.7 TPM= 1.93 Transcript Type= protein_coding
chr11	10858181	10859470	10858181	10859470	+	transcript1140.chr11.nnic@NA	transcript1140.chr11.nnic	NA	10858181	10859470	Gene ID= novel_gene_chr11_1141 TPM= 3.86 Transcript Type= NA
chr11	10858259	10879276	10858259	10879276	+	ENST00000501079.5@ZBED5-AS1	ENST00000501079.5	antisense_RNA	10858259,10865261,10878381	10858366,10865327,10879276	Gene ID= ENSG00000247271.6 TPM= 2.9 Transcript Type= antisense_RNA
chr11	10898883	10908993	10898883	10908993	+	transcript1142.chr11.nnic@ZBED5-AS1	transcript1142.chr11.nnic	antisense_RNA	10898883,10906455	10899018,10908993	Gene ID= ENSG00000247271.6 TPM= 3.38 Transcript Type= NA
chr11	10899225	10908989	10899225	10908989	+	transcript1144.chr11.nnic@ZBED5-AS1	transcript1144.chr11.nnic	antisense_RNA	10899225,10906455	10899290,10908989	Gene ID= ENSG00000247271.6 TPM= 2.41 Transcript Type= NA
chr11	10884885	10899322	10884885	10899322	-	ENST00000503469.2@AC069360.1	ENST00000503469.2	lincRNA	10899132,10884885	10899322,10885124	Gene ID= ENSG00000250041.2 TPM= 3.86 Transcript Type= lincRNA
chr11	11147043	11148557	11147043	11148557	+	transcript1151.chr11.nnic@NA	transcript1151.chr11.nnic	NA	11147043	11148557	Gene ID= novel_gene_chr11_1152 TPM= 1.93 Transcript Type= NA
chr11	11270876	11622005	11270876	11622005	-	transcript1155.chr11.nnic@GALNT18	transcript1155.chr11.nnic	protein_coding	11621359,11448744,11432621,11379081,11377182,11372515,11332694,11327086,11293029,11270876	11622005,11448936,11432787,11379264,11377379,11372629,11332831,11327181,11293193,11271290	Gene ID= ENSG00000110328.5 TPM= 4.83 Transcript Type= NA
chr11	11374609	11622005	11374609	11622005	-	transcript1161.chr11.nic@GALNT18	transcript1161.chr11.nic	protein_coding	11621359,11448744,11432621,11379081,11374609	11622005,11448936,11432787,11379264,11377379	Gene ID= ENSG00000110328.5 TPM= 1.93 Transcript Type= NA
chr11	11270876	11622005	11270876	11622005	-	ENST00000227756.4@GALNT18	ENST00000227756.4	protein_coding	11621359,11448744,11432621,11379081,11377182,11372515,11340819,11332694,11327086,11293029,11270876	11622005,11448936,11432787,11379264,11377379,11372629,11341004,11332831,11327181,11293193,11271290	Gene ID= ENSG00000110328.5 TPM= 73.36 Transcript Type= protein_coding
chr11	11841423	11959323	11841423	11959323	+	ENST00000339865.9@USP47	ENST00000339865.9	protein_coding	11841423,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335,11947945,11948478,11949889,11950364,11952741,11954897,11955034,11956001	11842224,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11943112,11948120,11948558,11950004,11950482,11952871,11954944,11955164,11959323	Gene ID= ENSG00000170242.17 TPM= 11.65 Transcript Type= protein_coding
chr11	11841960	11942957	11841960	11942957	+	transcript1221.chr11.nic@USP47	transcript1221.chr11.nic	protein_coding	11841960,11880177,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335	11842224,11880380,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11942957	Gene ID= ENSG00000170242.17 TPM= 8.95 Transcript Type= NA
chr11	11841975	11956421	11841975	11956421	+	ENST00000527733.5@USP47	ENST00000527733.5	protein_coding	11841975,11880177,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335,11947945,11948478,11949889,11950364,11952741,11954897,11955034,11956001	11842224,11880380,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11943112,11948120,11948558,11950004,11950482,11952871,11954944,11955164,11956421	Gene ID= ENSG00000170242.17 TPM= 18.41 Transcript Type= protein_coding
chr11	11842066	11959323	11842066	11959323	+	ENST00000399455.2@USP47	ENST00000399455.2	protein_coding	11842066,11873800,11880177,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335,11947945,11948478,11949889,11950364,11952741,11954897,11955034,11956001	11842224,11873859,11880380,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11943112,11948120,11948558,11950004,11950482,11952871,11954944,11955164,11959323	Gene ID= ENSG00000170242.17 TPM= 2 Transcript Type= protein_coding
chr11	11963106	12009370	11963106	12009370	-	ENST00000326932.8@DKK3	ENST00000326932.8	protein_coding	12009172,12008370,12002300,11998696,11968395,11966954,11965809,11963106	12009370,12008608,12002437,11998779,11968487,11967098,11965965,11964686	Gene ID= ENSG00000050165.17 TPM= 15.44 Transcript Type= protein_coding
chr11	11963106	12008626	11963106	12008626	-	transcript1240.chr11.nic@DKK3	transcript1240.chr11.nic	protein_coding	12008370,12002300,11998696,11968395,11966954,11965809,11963106	12008626,12002437,11998779,11968487,11967098,11965965,11964686	Gene ID= ENSG00000050165.17 TPM= 5.79 Transcript Type= NA
chr11	12065961	12066288	12065961	12066288	-	transcript1242.chr11.nnic@NA	transcript1242.chr11.nnic	NA	12065961	12066288	Gene ID= novel_gene_chr11_1243 TPM= 3.86 Transcript Type= NA
chr11	12066479	12073353	12066479	12073353	+	transcript1244.chr11.nnic@AC124276.1	transcript1244.chr11.nnic	lincRNA	12066479,12066847,12072191	12066674,12067003,12073353	Gene ID= ENSG00000254991.1 TPM= 1.93 Transcript Type= NA
chr11	12110580	12263785	12110580	12263785	+	transcript1247.chr11.nnic@MICAL2	transcript1247.chr11.nnic	protein_coding	12110580,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12241040,12242214,12242671,12243987,12249184,12255643,12256785,12258468,12259795,12262480,12263560	12110726,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12241162,12242432,12242772,12244112,12249246,12255750,12256971,12258556,12259897,12262537,12263785	Gene ID= ENSG00000133816.13 TPM= 2.58 Transcript Type= NA
chr11	12110529	12263785	12110529	12263785	+	transcript1249.chr11.nic@MICAL2	transcript1249.chr11.nic	protein_coding	12110529,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12241040,12242214,12242671,12243987,12255643,12256785,12258468,12259795,12262480,12263560	12110726,12138460,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12241162,12242432,12242772,12244112,12255750,12256971,12258556,12259897,12262537,12263785	Gene ID= ENSG00000133816.13 TPM= 18.02 Transcript Type= NA
chr11	12110529	12244238	12110529	12244238	+	transcript1253.chr11.nnic@MICAL2	transcript1253.chr11.nnic	protein_coding	12110529,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12217797,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12241040,12242214,12242671,12242879,12243987	12110726,12138460,12162419,12204457,12208139,12209598,12213410,12216319,12217841,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12241162,12242432,12242772,12243401,12244238	Gene ID= ENSG00000133816.13 TPM= 1.93 Transcript Type= NA
chr11	12110529	12244238	12110529	12244238	+	transcript1254.chr11.nnic@MICAL2	transcript1254.chr11.nnic	protein_coding	12110529,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12241040,12242214,12242671,12242879,12243987	12110726,12138460,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12241162,12242432,12242772,12243401,12244238	Gene ID= ENSG00000133816.13 TPM= 1.93 Transcript Type= NA
chr11	12110590	12244238	12110590	12244238	+	transcript1258.chr11.nic@MICAL2	transcript1258.chr11.nic	protein_coding	12110590,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12241040,12242214,12242671,12243987	12110726,12138460,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12241162,12242432,12242772,12244238	Gene ID= ENSG00000133816.13 TPM= 3.86 Transcript Type= NA
chr11	12110591	12263785	12110591	12263785	+	ENST00000256194.8@MICAL2	ENST00000256194.8	protein_coding	12110591,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12241040,12242214,12242671,12243987,12249184,12255643,12256785,12258468,12259795,12262480,12263560	12110726,12138464,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12241162,12242432,12242772,12244112,12249246,12255750,12256971,12258556,12259897,12262537,12263785	Gene ID= ENSG00000133816.13 TPM= 17.06 Transcript Type= protein_coding
chr11	12377185	12530801	12377185	12530801	+	ENST00000334956.12@PARVA	ENST00000334956.12	protein_coding	12377185,12473745,12473913,12477847,12496458,12504314,12508584,12511514,12513299,12513997,12517610,12518445,12527849	12377783,12473834,12473983,12477949,12496598,12504429,12508642,12511533,12513360,12514065,12517711,12518517,12530801	Gene ID= ENSG00000197702.11 TPM= 2.9 Transcript Type= protein_coding
chr11	12674272	12938034	12674272	12938034	+	transcript1271.chr11.nnic@TEAD1	transcript1271.chr11.nnic	protein_coding	12674272,12675409,12764179,12862250,12864686,12864838,12878889,12879708,12881005,12881896,12883001,12901940,12924912,12930174,12937109	12674834,12675561,12764434,12862314,12864748,12864900,12878900,12879842,12881051,12881957,12883125,12902113,12925052,12930326,12938034	Gene ID= ENSG00000187079.16 TPM= 16.13 Transcript Type= NA
chr11	12674461	12938034	12674461	12938034	+	transcript1274.chr11.nic@TEAD1	transcript1274.chr11.nic	protein_coding	12674461,12675409,12764179,12862250,12864838,12878889,12879708,12881005,12881896,12883001,12901940,12924912,12930174,12937109	12674834,12675561,12764434,12862314,12864900,12878900,12879842,12881051,12881957,12883125,12902113,12925052,12930326,12938034	Gene ID= ENSG00000187079.16 TPM= 2.62 Transcript Type= NA
chr11	12674461	12938034	12674461	12938034	+	transcript1276.chr11.nnic@TEAD1	transcript1276.chr11.nnic	protein_coding	12674461,12764179,12862250,12864686,12864838,12878889,12879708,12881005,12881896,12883001,12901940,12924912,12930174,12937109	12674834,12764434,12862314,12864748,12864900,12878900,12879842,12881051,12881957,12883125,12902113,12925052,12930326,12938034	Gene ID= ENSG00000187079.16 TPM= 5.27 Transcript Type= NA
chr11	12674403	12938034	12674403	12938034	+	transcript1281.chr11.nic@TEAD1	transcript1281.chr11.nic	protein_coding	12674403,12764179,12862250,12864838,12878889,12879708,12881005,12881896,12883001,12901940,12924912,12930174,12937109	12674834,12764434,12862314,12864900,12878900,12879842,12881051,12881957,12883125,12902113,12925052,12930326,12938034	Gene ID= ENSG00000187079.16 TPM= 3.34 Transcript Type= NA
chr11	12674403	12863510	12674403	12863510	+	transcript1288.chr11.nic@TEAD1	transcript1288.chr11.nic	protein_coding	12674403,12764179,12862250	12674834,12764434,12863510	Gene ID= ENSG00000187079.16 TPM= 1.93 Transcript Type= NA
chr11	12938791	12944730	12938791	12944730	+	transcript1289.chr11.nnic@NA	transcript1289.chr11.nnic	NA	12938791	12944730	Gene ID= novel_gene_chr11_1290 TPM= 30.89 Transcript Type= NA
chr11	13277798	13387266	13277798	13387266	+	transcript1300.chr11.nic@ARNTL	transcript1300.chr11.nic	protein_coding	13277798,13309987,13326413,13349945,13354301,13355226,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372163,13374095,13375612,13376640,13378337,13381161,13385689,13386596	13277923,13310059,13326467,13350070,13354448,13355296,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13387266	Gene ID= ENSG00000133794.17 TPM= 4.83 Transcript Type= NA
chr11	13277798	13387266	13277798	13387266	+	ENST00000389707.8@ARNTL	ENST00000389707.8	protein_coding	13277798,13309987,13326413,13349945,13354301,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372166,13374095,13375612,13376640,13378337,13381161,13385689,13386596	13277923,13310059,13326467,13350070,13354448,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13387266	Gene ID= ENSG00000133794.17 TPM= 6.76 Transcript Type= protein_coding
chr11	13277798	13387266	13277798	13387266	+	transcript1311.chr11.nnic@ARNTL	transcript1311.chr11.nnic	protein_coding	13277798,13309987,13349945,13354301,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372163,13374095,13375612,13376640,13378322,13381161,13385689,13386596	13277923,13310059,13350070,13354448,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13387266	Gene ID= ENSG00000133794.17 TPM= 3.86 Transcript Type= NA
chr11	13277856	13372510	13277856	13372510	+	transcript1320.chr11.nic@ARNTL	transcript1320.chr11.nic	protein_coding	13277856,13309987,13349945,13354301,13358434,13360345,13365500,13366665,13369697,13372163	13277923,13310059,13350070,13357096,13358591,13360424,13365592,13366782,13369767,13372510	Gene ID= ENSG00000133794.17 TPM= 1.93 Transcript Type= NA
chr11	13277798	13353846	13277798	13353846	+	transcript1332.chr11.nic@ARNTL	transcript1332.chr11.nic	protein_coding	13277798,13309987,13349945	13277923,13310059,13353846	Gene ID= ENSG00000133794.17 TPM= 1.93 Transcript Type= NA
chr11	13277831	13387266	13277831	13387266	+	ENST00000403290.5@ARNTL	ENST00000403290.5	protein_coding	13277831,13309987,13326413,13349945,13354301,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372163,13374095,13375612,13376640,13378337,13381161,13385689,13386596	13277923,13310059,13326467,13350070,13354448,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13387266	Gene ID= ENSG00000133794.17 TPM= 12.55 Transcript Type= protein_coding
chr11	13388024	13463268	13388024	13463268	-	transcript1321.chr11.nnic@BTBD10	transcript1321.chr11.nnic	protein_coding	13463092,13445024,13421642,13419460,13417158,13413530,13405659,13403900,13403168,13388024	13463268,13445181,13421838,13419745,13417260,13413650,13405856,13404015,13403278,13389141	Gene ID= ENSG00000148925.10 TPM= 1.93 Transcript Type= NA
chr11	13388024	13463298	13388024	13463298	-	transcript1323.chr11.nnic@BTBD10	transcript1323.chr11.nnic	protein_coding	13463092,13421642,13419460,13417158,13413530,13405659,13403900,13403168,13388024	13463298,13421838,13419745,13417260,13413650,13405856,13404015,13403278,13389141	Gene ID= ENSG00000148925.10 TPM= 2.9 Transcript Type= NA
chr11	13388001	13463280	13388001	13463280	-	ENST00000278174.9@BTBD10	ENST00000278174.9	protein_coding	13463092,13445024,13421642,13419460,13417158,13413530,13405659,13403168,13388001	13463280,13445181,13421838,13419745,13417260,13413650,13405856,13403278,13389141	Gene ID= ENSG00000148925.10 TPM= 3.86 Transcript Type= protein_coding
chr11	13668670	13732346	13668670	13732346	+	ENST00000354817.7@FAR1	ENST00000354817.7	protein_coding	13668670,13694759,13700317,13707900,13710693,13711764,13711928,13712966,13714509,13721730,13727556,13728612	13668806,13694954,13700492,13708079,13710870,13711808,13712046,13713033,13714680,13721859,13727683,13732346	Gene ID= ENSG00000197601.12 TPM= 2.9 Transcript Type= protein_coding
chr11	14269825	14271627	14269825	14271627	-	transcript1336.chr11.nnic@NA	transcript1336.chr11.nnic	NA	14269825	14271627	Gene ID= novel_gene_chr11_1337 TPM= 1.93 Transcript Type= NA
chr11	14278750	14359184	14278750	14359184	-	ENST00000256196.8@RRAS2	ENST00000256196.8	protein_coding	14358763,14295768,14294760,14294471,14281602,14278750	14359184,14295855,14294862,14294579,14281720,14279424	Gene ID= ENSG00000133818.13 TPM= 16.41 Transcript Type= protein_coding
chr11	14457506	14499852	14457506	14499852	-	ENST00000249923.7@COPB1	ENST00000249923.7	protein_coding	14499609,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457506	14499852,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883	Gene ID= ENSG00000129083.12 TPM= 4.34 Transcript Type= protein_coding
chr11	14457506	14499856	14457506	14499856	-	transcript1346.chr11.nic@COPB1	transcript1346.chr11.nic	protein_coding	14499742,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457506	14499856,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883	Gene ID= ENSG00000129083.12 TPM= 13.03 Transcript Type= NA
chr11	14457550	14499895	14457550	14499895	-	ENST00000439561.6@COPB1	ENST00000439561.6	protein_coding	14499707,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457550	14499895,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883	Gene ID= ENSG00000129083.12 TPM= 15.44 Transcript Type= protein_coding
chr11	14504876	14520350	14504876	14520350	-	transcript1351.chr11.nic@PSMA1	transcript1351.chr11.nic	protein_coding	14519873,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504876	14520350,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 12.71 Transcript Type= NA
chr11	14504876	14520380	14504876	14520380	-	transcript1353.chr11.nic@PSMA1	transcript1353.chr11.nic	protein_coding	14520193,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504876	14520380,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 16.57 Transcript Type= NA
chr11	14504876	14520696	14504876	14520696	-	ENST00000396394.6@PSMA1	ENST00000396394.6	protein_coding	14520297,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504876	14520696,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 249.21 Transcript Type= protein_coding
chr11	14504913	14520363	14504913	14520363	-	ENST00000530457.5@PSMA1	ENST00000530457.5	protein_coding	14519905,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504913	14520363,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 8.69 Transcript Type= protein_coding
chr11	14890539	14892258	14890539	14892258	-	transcript1366.chr11.nnic@NA	transcript1366.chr11.nnic	NA	14890539	14892258	Gene ID= novel_gene_chr11_1367 TPM= 3.86 Transcript Type= NA
chr11	15969074	15989153	15969074	15989153	-	transcript1369.chr11.nic@SOX6	transcript1369.chr11.nic	protein_coding	15988997,15986204,15969074	15989153,15986420,15973112	Gene ID= ENSG00000110693.17 TPM= 1.93 Transcript Type= NA
chr11	16605404	16605722	16605404	16605722	-	transcript1374.chr11.nnic@NA	transcript1374.chr11.nnic	NA	16605404	16605722	Gene ID= novel_gene_chr11_1375 TPM= 1.93 Transcript Type= NA
chr11	16738606	16758109	16738606	16758109	+	transcript1381.chr11.nic@C11orf58	transcript1381.chr11.nic	protein_coding	16738606,16744601,16748097,16752785,16754871,16756816	16738841,16744684,16748157,16752894,16756364,16758109	Gene ID= ENSG00000110696.9 TPM= 6.76 Transcript Type= NA
chr11	16738401	16756223	16738401	16756223	+	ENST00000228136.8@C11orf58	ENST00000228136.8	protein_coding	16738401,16744601,16748097,16752785,16754871	16738841,16744684,16748157,16752894,16756223	Gene ID= ENSG00000110696.9 TPM= 15.44 Transcript Type= protein_coding
chr11	16974693	16975013	16974693	16975013	-	ENST00000459748.1@AC116533.1	ENST00000459748.1	processed_pseudogene	16974693	16975013	Gene ID= ENSG00000244398.1 TPM= 312.76 Transcript Type= processed_pseudogene
chr11	17074389	17077787	17074389	17077787	-	ENST00000525634.5@RPS13	ENST00000525634.5	protein_coding	17077619,17077429,17077168,17075454,17075097,17074389	17077787,17077477,17077246,17075623,17075197,17074466	Gene ID= ENSG00000110700.6 TPM= 1183.71 Transcript Type= protein_coding
chr11	17074389	17077666	17074389	17077666	-	ENST00000228140.6@RPS13	ENST00000228140.6	protein_coding	17077619,17077429,17077168,17075454,17075097,17074389	17077666,17077477,17077246,17075623,17075163,17074466	Gene ID= ENSG00000110700.6 TPM= 22.2 Transcript Type= protein_coding
chr11	17074389	17077706	17074389	17077706	-	ENST00000526895.5@RPS13	ENST00000526895.5	protein_coding	17077619,17077429,17077168,17075454,17075097,17074389	17077706,17077473,17077246,17075623,17075197,17074466	Gene ID= ENSG00000110700.6 TPM= 26.79 Transcript Type= processed_transcript
chr11	17074393	17077668	17074393	17077668	-	ENST00000525828.1@RPS13	ENST00000525828.1	protein_coding	17077429,17077168,17075454,17075097,17074393	17077668,17077246,17075623,17075197,17074466	Gene ID= ENSG00000110700.6 TPM= 22.76 Transcript Type= retained_intron
chr11	17276711	17331516	17276711	17331516	+	transcript1409.chr11.nic@NUCB2	transcript1409.chr11.nic	protein_coding	17276711,17282789,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902,17331412	17276848,17282943,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17330983,17331516	Gene ID= ENSG00000070081.15 TPM= 1.93 Transcript Type= NA
chr11	17276706	17310937	17276706	17310937	+	transcript1414.chr11.nic@NUCB2	transcript1414.chr11.nic	protein_coding	17276706,17278362,17282789,17295324,17296104,17301744,17309572,17310825	17276828,17278537,17282943,17295467,17296211,17301870,17309675,17310937	Gene ID= ENSG00000070081.15 TPM= 1.93 Transcript Type= NA
chr11	17276695	17310937	17276695	17310937	+	transcript1418.chr11.nic@NUCB2	transcript1418.chr11.nic	protein_coding	17276695,17282789,17295324,17296104,17301744,17309572,17310825	17276828,17282943,17295467,17296211,17301870,17309675,17310937	Gene ID= ENSG00000070081.15 TPM= 4.83 Transcript Type= NA
chr11	17366106	17389376	17366106	17389376	-	transcript1423.chr11.nnic@KCNJ11	transcript1423.chr11.nnic	protein_coding	17388841,17386869,17366106	17389376,17387846,17366302	Gene ID= ENSG00000187486.5 TPM= 3.62 Transcript Type= NA
chr11	17385251	17389117	17385251	17389117	-	transcript1426.chr11.nic@KCNJ11	transcript1426.chr11.nic	protein_coding	17388018,17385251	17389117,17387846	Gene ID= ENSG00000187486.5 TPM= 74.81 Transcript Type= NA
chr11	17385853	17389376	17385853	17389376	-	transcript1430.chr11.nnic@KCNJ11	transcript1430.chr11.nnic	protein_coding	17388841,17385853	17389376,17387846	Gene ID= ENSG00000187486.5 TPM= 29.3 Transcript Type= NA
chr11	17385853	17389346	17385853	17389346	-	transcript1431.chr11.nnic@KCNJ11	transcript1431.chr11.nnic	protein_coding	17389056,17385853	17389346,17387846	Gene ID= ENSG00000187486.5 TPM= 23.99 Transcript Type= NA
chr11	17385862	17389117	17385862	17389117	-	transcript1434.chr11.nic@KCNJ11	transcript1434.chr11.nic	protein_coding	17388018,17385862	17389117,17387846	Gene ID= ENSG00000187486.5 TPM= 20.37 Transcript Type= NA
chr11	17385859	17388659	17385859	17388659	-	ENST00000339994.4@KCNJ11	ENST00000339994.4	protein_coding	17385859	17388659	Gene ID= ENSG00000187486.5 TPM= 90.35 Transcript Type= protein_coding
chr11	17385859	17389331	17385859	17389331	-	ENST00000528731.1@KCNJ11	ENST00000528731.1	protein_coding	17389174,17385859	17389331,17387846	Gene ID= ENSG00000187486.5 TPM= 21.09 Transcript Type= protein_coding
chr11	17719568	17722131	17719568	17722131	+	ENST00000250003.3@MYOD1	ENST00000250003.3	protein_coding	17719568,17720902,17721255	17720412,17720980,17722131	Gene ID= ENSG00000129152.3 TPM= 46.33 Transcript Type= protein_coding
chr11	17725189	17727471	17725189	17727471	-	transcript1444.chr11.nnic@NA	transcript1444.chr11.nnic	NA	17725189	17727471	Gene ID= novel_gene_chr11_1445 TPM= 1.93 Transcript Type= NA
chr11	17788048	18013162	17788048	18013162	-	ENST00000265965.9@SERGEF	ENST00000265965.9	protein_coding	18012951,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17959470,17878208,17788048	18013162,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17959636,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 9.01 Transcript Type= protein_coding
chr11	17788048	18012937	17788048	18012937	-	transcript1450.chr11.nic@SERGEF	transcript1450.chr11.nic	protein_coding	18012851,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17878208,17788048	18012937,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 3.21 Transcript Type= NA
chr11	17788049	18013028	17788049	18013028	-	ENST00000528200.5@SERGEF	ENST00000528200.5	protein_coding	18012951,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17878208,17788049	18013028,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 10.94 Transcript Type= protein_coding
chr11	18245228	18248643	18245228	18248643	-	ENST00000256733.8@SAA2	ENST00000256733.8	protein_coding	18248603,18247921,18245910,18245228	18248643,18248015,18246048,18245515	Gene ID= ENSG00000134339.8 TPM= 5.79 Transcript Type= protein_coding
chr11	18245243	18248635	18245243	18248635	-	ENST00000526900.1@SAA2	ENST00000526900.1	protein_coding	18248456,18247921,18245910,18245243	18248635,18248015,18246048,18245515	Gene ID= ENSG00000134339.8 TPM= 1.93 Transcript Type= protein_coding
chr11	18266174	18269974	18266174	18269974	+	ENST00000356524.8@SAA1	ENST00000356524.8	protein_coding	18266174,18266884,18269195,18269717	18266296,18266978,18269333,18269974	Gene ID= ENSG00000173432.10 TPM= 20.27 Transcript Type= protein_coding
chr11	18266264	18269977	18266264	18269977	+	ENST00000405158.2@SAA1	ENST00000405158.2	protein_coding	18266264,18266884,18269195,18269717	18266443,18266978,18269333,18269977	Gene ID= ENSG00000173432.10 TPM= 4.83 Transcript Type= protein_coding
chr11	18291805	18322195	18291805	18322195	-	transcript1468.chr11.nic@HPS5	transcript1468.chr11.nic	protein_coding	18321946,18317751,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291805	18322195,18317907,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019	Gene ID= ENSG00000110756.17 TPM= 1.93 Transcript Type= NA
chr11	18322554	18348831	18322554	18348831	+	transcript1478.chr11.nic@GTF2H1	transcript1478.chr11.nic	protein_coding	18322554,18333060,18335754,18338109,18339564,18341261,18341528,18347588,18347832	18322740,18333228,18335946,18338274,18339657,18341410,18341607,18347715,18348831	Gene ID= ENSG00000110768.11 TPM= 1.93 Transcript Type= NA
chr11	18322596	18367044	18322596	18367044	+	ENST00000265963.8@GTF2H1	ENST00000265963.8	protein_coding	18322596,18333060,18335754,18338109,18339564,18341261,18341528,18347588,18347832,18351881,18352329,18357952,18358525,18360615,18365783	18322740,18333228,18335946,18338274,18339657,18341410,18341607,18347715,18347919,18351969,18352446,18358042,18358640,18360707,18367044	Gene ID= ENSG00000110768.11 TPM= 3.86 Transcript Type= protein_coding
chr11	18394388	18408425	18394388	18408425	+	ENST00000422447.7@LDHA	ENST00000422447.7	protein_coding	18394388,18396819,18399431,18400837,18402840,18403694,18405449,18407117	18394636,18396968,18399548,18401010,18403013,18403811,18405572,18408425	Gene ID= ENSG00000134333.13 TPM= 1104.32 Transcript Type= protein_coding
chr11	18468824	18526945	18468824	18526945	-	transcript1489.chr11.nic@TSG101	transcript1489.chr11.nic	protein_coding	18526775,18519519,18516099,18514678,18509542,18506857,18502486,18483870,18481630,18480485,18468824	18526945,18519603,18516164,18514841,18509665,18506923,18502577,18484072,18481869,18480635,18469218	Gene ID= ENSG00000074319.12 TPM= 3.86 Transcript Type= NA
chr11	18480311	18527232	18480311	18527232	-	ENST00000251968.3@TSG101	ENST00000251968.3	protein_coding	18526775,18519519,18516099,18514678,18509542,18506857,18502486,18483870,18481630,18480311	18527232,18519603,18516164,18514841,18509665,18506923,18502577,18484072,18481869,18480635	Gene ID= ENSG00000074319.12 TPM= 120.35 Transcript Type= protein_coding
chr11	18480311	18526934	18480311	18526934	-	transcript1496.chr11.nic@TSG101	transcript1496.chr11.nic	protein_coding	18526775,18516099,18514678,18509542,18506857,18502486,18483870,18481630,18480311	18526934,18516164,18514841,18509665,18506923,18502577,18484072,18481869,18480635	Gene ID= ENSG00000074319.12 TPM= 14.16 Transcript Type= NA
chr11	18531677	18588731	18531677	18588731	-	transcript1502.chr11.nnic@UEVLD	transcript1502.chr11.nnic	protein_coding	18588613,18578724,18575347,18570214,18566347,18564892,18563307,18558228,18546880,18544623,18536406,18534330,18531677	18588731,18578808,18575412,18570377,18566482,18565010,18563423,18558330,18547050,18544796,18536469,18534453,18532487	Gene ID= ENSG00000151116.16 TPM= 1.93 Transcript Type= NA
chr11	18588802	18603883	18588802	18603883	+	transcript1515.chr11.nnic@SPTY2D1-AS1	transcript1515.chr11.nnic	protein_coding	18588802,18603158,18603772	18588995,18603195,18603883	Gene ID= ENSG00000247595.4 TPM= 2.9 Transcript Type= NA
chr11	18606401	18634493	18606401	18634493	-	ENST00000336349.5@SPTY2D1	ENST00000336349.5	protein_coding	18634198,18616875,18614563,18612314,18611477,18606401	18634493,18616989,18616098,18612488,18611554,18609954	Gene ID= ENSG00000179119.14 TPM= 7.72 Transcript Type= protein_coding
chr11	18609270	18634820	18609270	18634820	-	transcript1520.chr11.nic@SPTY2D1	transcript1520.chr11.nic	protein_coding	18634690,18616875,18614563,18612314,18611477,18609270	18634820,18616989,18616098,18612488,18611554,18609954	Gene ID= ENSG00000179119.14 TPM= 2.9 Transcript Type= NA
chr11	19117129	19176415	19117129	19176415	+	ENST00000446113.6@ZDHHC13	ENST00000446113.6	protein_coding	19117129,19142978,19146181,19147596,19149187,19150727,19152158,19152559,19155796,19158940,19163303,19164301,19165052,19166302,19170411,19172723,19175822	19117276,19143123,19146303,19147673,19149331,19150791,19152320,19152684,19155929,19159040,19163427,19164363,19165145,19166385,19170568,19172820,19176415	Gene ID= ENSG00000177054.13 TPM= 1.93 Transcript Type= protein_coding
chr11	19182413	19202072	19182413	19202072	-	transcript1543.chr11.nnic@CSRP3	transcript1543.chr11.nnic	protein_coding	19201954,19192337,19184952,19182413	19202072,19192476,19185045,19182746	Gene ID= ENSG00000129170.8 TPM= 13.83 Transcript Type= NA
chr11	19182030	19202042	19182030	19202042	-	ENST00000265968.7@CSRP3	ENST00000265968.7	protein_coding	19201954,19192337,19188136,19186216,19184952,19182030	19202042,19192476,19188304,19186348,19185045,19182746	Gene ID= ENSG00000129170.8 TPM= 84.63 Transcript Type= protein_coding
chr11	20363743	20383782	20363743	20383782	+	ENST00000419348.6@HTATIP2	ENST00000419348.6	protein_coding	20363743,20364237,20367174,20376580,20382178,20382980	20363912,20364432,20367281,20376717,20382239,20383782	Gene ID= ENSG00000109854.13 TPM= 41.03 Transcript Type= protein_coding
chr11	20363797	20383783	20363797	20383783	+	ENST00000451739.6@HTATIP2	ENST00000451739.6	protein_coding	20363797,20367174,20376580,20382178,20382980	20364432,20367281,20376717,20382239,20383783	Gene ID= ENSG00000109854.13 TPM= 10.14 Transcript Type= protein_coding
chr11	20387580	20509282	20387580	20509282	+	transcript1563.chr11.nnic@PRMT3	transcript1563.chr11.nnic	protein_coding	20387580,20388019,20389744,20392211,20392897,20395803,20402919,20407911,20426766,20452130,20461980,20464460,20493919,20494167,20508304	20387774,20388154,20389826,20392260,20392999,20395962,20402984,20408032,20426865,20452208,20462167,20464546,20493969,20494254,20509282	Gene ID= ENSG00000185238.12 TPM= 1.93 Transcript Type= NA
chr11	20387530	20509253	20387530	20509253	+	ENST00000331079.10@PRMT3	ENST00000331079.10	protein_coding	20387530,20388019,20389744,20392211,20392897,20395803,20397577,20402919,20407911,20426766,20452130,20461980,20464460,20493919,20494167,20508304	20387774,20388154,20389826,20392260,20392999,20395962,20397721,20402984,20408032,20426865,20452208,20462167,20464546,20493969,20494254,20509253	Gene ID= ENSG00000185238.12 TPM= 32.82 Transcript Type= protein_coding
chr11	22623061	22625825	22623061	22625825	-	transcript1584.chr11.nnic@NA	transcript1584.chr11.nnic	NA	22623061	22625825	Gene ID= novel_gene_chr11_1585 TPM= 6.76 Transcript Type= NA
chr11	22827245	22829879	22827245	22829879	-	transcript1598.chr11.nic@SVIP	transcript1598.chr11.nic	protein_coding	22829695,22827824,22827245	22829879,22827874,22827320	Gene ID= ENSG00000198168.8 TPM= 2.9 Transcript Type= NA
chr11	26994184	26996121	26994184	26996121	+	ENST00000318627.3@FIBIN	ENST00000318627.3	protein_coding	26994184	26996121	Gene ID= ENSG00000176971.3 TPM= 1.93 Transcript Type= protein_coding
chr11	27341409	27363247	27341409	27363247	-	transcript1606.chr11.nnic@CCDC34	transcript1606.chr11.nnic	protein_coding	27362836,27357403,27341409	27363247,27357541,27341550	Gene ID= ENSG00000109881.16 TPM= 3.86 Transcript Type= NA
chr11	27365961	27472746	27365961	27472746	-	ENST00000379214.8@LGR4	ENST00000379214.8	protein_coding	27472118,27412789,27392447,27391094,27385253,27384336,27382188,27380895,27380640,27380271,27378697,27377158,27376299,27373975,27373551,27372283,27371615,27365961	27472746,27412860,27392518,27391165,27385468,27384407,27382256,27380966,27380711,27380339,27378768,27377223,27376370,27374046,27373676,27372398,27371698,27369143	Gene ID= ENSG00000205213.13 TPM= 3.86 Transcript Type= protein_coding
chr11	27494576	27506773	27494576	27506773	-	ENST00000278193.6@LIN7C	ENST00000278193.6	protein_coding	27506716,27501802,27501495,27499359,27494576	27506773,27501920,27501566,27499568,27498804	Gene ID= ENSG00000148943.11 TPM= 6.76 Transcript Type= protein_coding
chr11	28108375	28332953	28108375	28332953	+	transcript1622.chr11.nnic@METTL15	transcript1622.chr11.nnic	protein_coding	28108375,28110166,28113318,28211062,28290206,28330396	28108454,28110401,28113604,28211198,28290397,28332953	Gene ID= ENSG00000169519.20 TPM= 2.9 Transcript Type= NA
chr11	30323104	30338449	30323104	30338449	+	transcript1624.chr11.nnic@ARL14EP	transcript1624.chr11.nnic	protein_coding	30323104,30330886,30332866,30336567,30337303	30323202,30331374,30332993,30336826,30338449	Gene ID= ENSG00000152219.4 TPM= 1.93 Transcript Type= NA
chr11	30323051	30338227	30323051	30338227	+	ENST00000282032.3@ARL14EP	ENST00000282032.3	protein_coding	30323051,30330886,30332866,30336567	30323202,30331374,30332993,30338227	Gene ID= ENSG00000152219.4 TPM= 12.55 Transcript Type= protein_coding
chr11	30410227	30586315	30410227	30586315	-	transcript1634.chr11.nic@MPPED2	transcript1634.chr11.nic	protein_coding	30586042,30580246,30535994,30495296,30417518,30414228,30410227	30586315,30580494,30536175,30495521,30417633,30414341,30411586	Gene ID= ENSG00000066382.16 TPM= 1.93 Transcript Type= NA
chr11	30687710	30697059	30687710	30697059	-	transcript1636.chr11.nnic@NA	transcript1636.chr11.nnic	NA	30696986,30695272,30687710	30697059,30695389,30688365	Gene ID= novel_gene_chr11_1637 TPM= 1.93 Transcript Type= NA
chr11	31369840	31431849	31369840	31431849	+	ENST00000465995.5@DNAJC24	ENST00000465995.5	protein_coding	31369840,31370716,31414811,31426287,31430271	31369912,31370859,31414949,31426355,31431849	Gene ID= ENSG00000170946.14 TPM= 2.9 Transcript Type= protein_coding
chr11	31509700	31790328	31509700	31790328	+	ENST00000640961.1@ELP4	ENST00000640961.1	protein_coding	31509700,31520056,31539662,31594770,31603768,31627110,31632217,31647741,31650115,31783393	31510007,31520091,31539783,31594901,31603907,31627194,31632405,31647849,31650221,31790328	Gene ID= ENSG00000109911.18 TPM= 2.9 Transcript Type= protein_coding
chr11	32583825	32606262	32583825	32606262	+	ENST00000531120.5@EIF3M	ENST00000531120.5	protein_coding	32583825,32587012,32588594,32589012,32589547,32593866,32594914,32595966,32600689,32601762,32602279	32583929,32587144,32588732,32589135,32589641,32593949,32595013,32596047,32600832,32601822,32606262	Gene ID= ENSG00000149100.12 TPM= 4.83 Transcript Type= protein_coding
chr11	33015864	33033582	33015864	33033582	+	ENST00000241051.7@DEPDC7	ENST00000241051.7	protein_coding	33015864,33025659,33027686,33028603,33031378,33032336,33032668,33032889,33033262	33016028,33026049,33027813,33028792,33031589,33032478,33032793,33032967,33033582	Gene ID= ENSG00000121690.10 TPM= 5.79 Transcript Type= protein_coding
chr11	33039417	33073563	33039417	33073563	+	ENST00000334274.8@TCP11L1	ENST00000334274.8	protein_coding	33039417,33043750,33054593,33057115,33057919,33058959,33061530,33065830,33068687,33072474	33039792,33043936,33054725,33057235,33058139,33059095,33061726,33066011,33068859,33073563	Gene ID= ENSG00000176148.15 TPM= 5.79 Transcript Type= protein_coding
chr11	33084584	33161465	33084584	33161465	-	ENST00000323959.8@CSTF3	ENST00000323959.8	protein_coding	33161299,33141885,33141667,33108386,33107903,33105998,33105883,33105567,33103107,33102177,33099608,33099034,33098690,33096835,33096306,33092271,33090532,33086988,33085895,33085713,33084584	33161465,33141986,33141762,33108418,33108000,33106064,33105917,33105693,33103184,33102339,33099717,33099150,33098764,33096978,33096408,33092340,33090727,33087141,33085989,33085773,33085289	Gene ID= ENSG00000176102.11 TPM= 3.86 Transcript Type= protein_coding
chr11	33258331	33357020	33258331	33357020	+	ENST00000456517.2@HIPK3	ENST00000456517.2	protein_coding	33258331,33286413,33328510,33337075,33338757,33339350,33340968,33341563,33347293,33347629,33347852,33348522,33349147,33351608,33352138,33353092	33258690,33287511,33328633,33337194,33338843,33339534,33341127,33341686,33347414,33347753,33348013,33348818,33349287,33351843,33352265,33357020	Gene ID= ENSG00000110422.11 TPM= 31.86 Transcript Type= protein_coding
chr11	33257280	33347986	33257280	33347986	+	transcript1678.chr11.nic@HIPK3	transcript1678.chr11.nic	protein_coding	33257280,33286413,33328510,33337075,33338757,33339350,33340968,33341563,33347293,33347629,33347852	33257889,33287511,33328633,33337194,33338843,33339534,33341127,33341686,33347414,33347753,33347986	Gene ID= ENSG00000110422.11 TPM= 18.34 Transcript Type= NA
chr11	33709929	33722726	33709929	33722726	-	ENST00000437761.6@CD59	ENST00000437761.6	protein_coding	33722571,33722379,33717370,33709929	33722726,33722463,33717471,33710343	Gene ID= ENSG00000085063.14 TPM= 4.83 Transcript Type= protein_coding
chr11	33708865	33736445	33708865	33736445	-	ENST00000351554.7@CD59	ENST00000351554.7	protein_coding	33736382,33731424,33722379,33717370,33708865	33736445,33731468,33722463,33717471,33710343	Gene ID= ENSG00000085063.14 TPM= 50.2 Transcript Type= protein_coding
chr11	33708700	33736439	33708700	33736439	-	ENST00000395850.7@CD59	ENST00000395850.7	protein_coding	33736382,33722379,33717370,33708700	33736439,33722463,33717471,33710343	Gene ID= ENSG00000085063.14 TPM= 29.92 Transcript Type= protein_coding
chr11	33708900	33722710	33708900	33722710	-	ENST00000415002.6@CD59	ENST00000415002.6	protein_coding	33722379,33717370,33708900	33722710,33717471,33710343	Gene ID= ENSG00000085063.14 TPM= 1.93 Transcript Type= protein_coding
chr11	33703765	33706570	33703765	33706570	+	transcript1701.chr11.nnic@NA	transcript1701.chr11.nnic	NA	33703765	33706570	Gene ID= novel_gene_chr11_1702 TPM= 76.26 Transcript Type= NA
chr11	33705281	33708268	33705281	33708268	-	transcript1703.chr11.nnic@NA	transcript1703.chr11.nnic	NA	33705281	33708268	Gene ID= novel_gene_chr11_1704 TPM= 44.4 Transcript Type= NA
chr11	33740956	33774526	33740956	33774526	-	transcript1707.chr11.nic@FBXO3	transcript1707.chr11.nic	protein_coding	33774394,33770741,33768851,33763206,33758487,33755771,33754455,33751523,33750539,33748777,33747130,33740956	33774526,33770830,33769014,33763286,33758601,33755975,33754500,33751607,33750661,33748892,33747320,33742084	Gene ID= ENSG00000110429.13 TPM= 3.06 Transcript Type= NA
chr11	33742776	33774526	33742776	33774526	-	transcript1710.chr11.nnic@FBXO3	transcript1710.chr11.nnic	protein_coding	33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33747130,33742776	33774526,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320,33743158	Gene ID= ENSG00000110429.13 TPM= 1.93 Transcript Type= NA
chr11	33740956	33774525	33740956	33774525	-	ENST00000530013.5@FBXO3	ENST00000530013.5	protein_coding	33774394,33770741,33768851,33758487,33755771,33753111,33751523,33750539,33748777,33747130,33740956	33774525,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320,33742084	Gene ID= ENSG00000110429.13 TPM= 4.03 Transcript Type= retained_intron
chr11	33740946	33774516	33740946	33774516	-	ENST00000265651.7@FBXO3	ENST00000265651.7	protein_coding	33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33747130,33740946	33774516,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320,33742084	Gene ID= ENSG00000110429.13 TPM= 49.88 Transcript Type= protein_coding
chr11	33771278	33773976	33771278	33773976	-	transcript1720.chr11.nnic@NA	transcript1720.chr11.nnic	NA	33771278	33773976	Gene ID= novel_gene_chr11_1721 TPM= 1.93 Transcript Type= NA
chr11	33858576	33892289	33858576	33892289	-	ENST00000257818.2@LMO2	ENST00000257818.2	protein_coding	33891795,33881824,33869710,33869346,33864602,33858576	33892289,33881887,33869987,33869586,33864817,33859575	Gene ID= ENSG00000135363.11 TPM= 7.72 Transcript Type= protein_coding
chr11	33858576	33869536	33858576	33869536	-	ENST00000411482.1@LMO2	ENST00000411482.1	protein_coding	33869346,33864602,33858576	33869536,33864929,33859575	Gene ID= ENSG00000135363.11 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chr11	33858576	33869816	33858576	33869816	-	ENST00000395833.7@LMO2	ENST00000395833.7	protein_coding	33869346,33864602,33858576	33869816,33864817,33859575	Gene ID= ENSG00000135363.11 TPM= 15.93 Transcript Type= protein_coding
chr11	34051683	34101156	34051683	34101156	+	ENST00000341394.8@CAPRIN1	ENST00000341394.8	protein_coding	34051683,34052421,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698,34099303	34051871,34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34097761,34101156	Gene ID= ENSG00000135387.20 TPM= 25.1 Transcript Type= protein_coding
chr11	34051732	34099054	34051732	34099054	+	ENST00000389645.7@CAPRIN1	ENST00000389645.7	protein_coding	34051732,34052421,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698	34051871,34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34099054	Gene ID= ENSG00000135387.20 TPM= 12.55 Transcript Type= protein_coding
chr11	34105602	34146910	34105602	34146910	+	ENST00000257829.7@NAT10	ENST00000257829.7	protein_coding	34105602,34108211,34108742,34112052,34113716,34115823,34118180,34118396,34122459,34123762,34124302,34127463,34130813,34131381,34132125,34133026,34134319,34134512,34135175,34136642,34136978,34139191,34139385,34140400,34141089,34141719,34142275,34143445,34146084	34105792,34108333,34108833,34112223,34113838,34115884,34118294,34118503,34122592,34123855,34124400,34127599,34130937,34131531,34132221,34133142,34134420,34134586,34135291,34136775,34137026,34139287,34139495,34140572,34141208,34141817,34142348,34143528,34146910	Gene ID= ENSG00000135372.8 TPM= 36.68 Transcript Type= protein_coding
chr11	34150988	34358008	34150988	34358008	-	ENST00000435224.2@ABTB2	ENST00000435224.2	protein_coding	34356701,34204544,34197325,34173155,34170906,34167903,34167259,34165260,34164686,34162576,34160903,34160248,34159906,34159296,34154701,34154265,34150988	34358008,34204690,34197538,34173307,34171071,34167992,34167360,34165356,34164821,34162805,34161081,34160353,34160008,34159386,34154769,34154378,34152584	Gene ID= ENSG00000166016.5 TPM= 32.82 Transcript Type= protein_coding
chr11	34438925	34472062	34438925	34472062	+	ENST00000241052.4@CAT	ENST00000241052.4	protein_coding	34438925,34449192,34450988,34452077,34453090,34453801,34456011,34456665,34461251,34464105,34468288,34470958,34471368	34439079,34449363,34451098,34452207,34453194,34453926,34456202,34456817,34461389,34464235,34468395,34471041,34472062	Gene ID= ENSG00000121691.4 TPM= 101.36 Transcript Type= protein_coding
chr11	34631524	34659112	34631524	34659112	+	transcript1759.chr11.nnic@EHF	transcript1759.chr11.nnic	protein_coding	34631524,34642628,34646439,34649019,34651542,34651737,34656908,34658533,34658832	34631628,34642727,34646684,34649081,34651610,34651805,34656970,34658728,34659112	Gene ID= ENSG00000135373.12 TPM= 1.93 Transcript Type= NA
chr11	34882370	34916405	34882370	34916405	-	transcript1771.chr11.nnic@APIP	transcript1771.chr11.nnic	protein_coding	34916228,34896761,34895010,34890504,34888752,34888293,34883337,34882370	34916405,34896855,34895110,34890552,34888869,34888428,34883504,34882816	Gene ID= ENSG00000149089.12 TPM= 2.9 Transcript Type= NA
chr11	34882295	34916499	34882295	34916499	-	ENST00000395787.3@APIP	ENST00000395787.3	protein_coding	34916228,34895010,34890504,34888752,34888293,34883337,34882295	34916499,34895110,34890552,34888869,34888428,34883504,34882816	Gene ID= ENSG00000149089.12 TPM= 2.9 Transcript Type= protein_coding
chr11	34882370	34916351	34882370	34916351	-	ENST00000527830.1@APIP	ENST00000527830.1	protein_coding	34916228,34890504,34888752,34888293,34883337,34882370	34916351,34890552,34888869,34888428,34883504,34882816	Gene ID= ENSG00000149089.12 TPM= 6.76 Transcript Type= processed_transcript
chr11	34916130	34996122	34916130	34996122	+	ENST00000448838.7@PDHX	ENST00000448838.7	protein_coding	34916130,34931404,34947506,34957384,34960420,34966640,34970139,34978124,34984570,34992315,34994914	34916486,34931484,34947606,34957583,34960518,34966814,34970286,34978182,34984728,34992379,34996122	Gene ID= ENSG00000110435.11 TPM= 1.93 Transcript Type= protein_coding
chr11	34916572	34995971	34916572	34995971	+	ENST00000227868.8@PDHX	ENST00000227868.8	protein_coding	34916572,34931404,34947506,34957384,34960420,34966640,34970139,34978124,34984570,34992315,34994914	34916815,34931484,34947606,34957583,34960518,34966814,34970286,34978182,34984728,34992379,34995971	Gene ID= ENSG00000110435.11 TPM= 99.43 Transcript Type= protein_coding
chr11	35138870	35232402	35138870	35232402	+	ENST00000263398.10@CD44	ENST00000263398.10	protein_coding	35138870,35176575,35180274,35186832,35189835,35214852,35219316,35221654,35229129	35139370,35176740,35180407,35186900,35190065,35214914,35219387,35221732,35232402	Gene ID= ENSG00000026508.17 TPM= 15.44 Transcript Type= protein_coding
chr11	35618419	35620868	35618419	35620868	+	ENST00000317811.5@FJX1	ENST00000317811.5	protein_coding	35618419	35620868	Gene ID= ENSG00000179431.6 TPM= 8.69 Transcript Type= protein_coding
chr11	35662731	35808225	35662731	35808225	+	transcript1794.chr11.nnic@TRIM44	transcript1794.chr11.nnic	protein_coding	35662731,35685259,35724274,35725924,35735426,35806358	35663780,35685336,35724368,35726163,35735445,35808225	Gene ID= ENSG00000166326.6 TPM= 3.86 Transcript Type= NA
chr11	35662731	35808225	35662731	35808225	+	transcript1808.chr11.nnic@TRIM44	transcript1808.chr11.nnic	protein_coding	35662731,35685259,35735426,35806358	35663780,35685336,35735445,35808225	Gene ID= ENSG00000166326.6 TPM= 7.72 Transcript Type= NA
chr11	35807321	35811051	35807321	35811051	+	transcript1812.chr11.nnic@NA	transcript1812.chr11.nnic	NA	35807321	35811051	Gene ID= novel_gene_chr11_1813 TPM= 9.65 Transcript Type= NA
chr11	35944078	36232136	35944078	36232136	+	ENST00000315571.5@LDLRAD3	ENST00000315571.5	protein_coding	35944078,36036103,36081653,36098327,36227085,36229160	35944144,36036249,36081778,36098461,36227430,36232136	Gene ID= ENSG00000179241.12 TPM= 7.72 Transcript Type= protein_coding
chr11	36273960	36289429	36273960	36289429	-	transcript1822.chr11.nnic@COMMD9	transcript1822.chr11.nnic	protein_coding	36289362,36277089,36276137,36273960	36289429,36277123,36276240,36274772	Gene ID= ENSG00000110442.11 TPM= 1.93 Transcript Type= NA
chr11	36272292	36289429	36272292	36289429	-	ENST00000263401.9@COMMD9	ENST00000263401.9	protein_coding	36289362,36280712,36278477,36277089,36276137,36272292	36289429,36280837,36278616,36277123,36276240,36274772	Gene ID= ENSG00000110442.11 TPM= 1.93 Transcript Type= protein_coding
chr11	36488043	36510300	36488043	36510300	-	transcript1824.chr11.nnic@TRAF6	transcript1824.chr11.nnic	protein_coding	36510048,36501220,36498490,36497108,36494976,36492551,36489999,36488043	36510300,36501537,36498640,36497266,36495047,36492628,36490650,36488298	Gene ID= ENSG00000175104.14 TPM= 3.86 Transcript Type= NA
chr11	36594524	36659272	36594524	36659272	+	transcript1831.chr11.nnic@C11orf74	transcript1831.chr11.nnic	protein_coding	36594524,36597648,36610081,36633284,36636051,36648016,36659019	36594761,36597730,36610239,36633438,36636117,36648155,36659272	Gene ID= ENSG00000166352.15 TPM= 1.93 Transcript Type= NA
chr11	36594501	36659268	36594501	36659268	+	ENST00000334307.9@C11orf74	ENST00000334307.9	protein_coding	36594501,36610081,36633284,36636051,36648016,36659019	36594592,36610239,36633438,36636117,36648155,36659268	Gene ID= ENSG00000166352.15 TPM= 8.69 Transcript Type= protein_coding
chr11	36594502	36659272	36594502	36659272	+	transcript1837.chr11.nic@C11orf74	transcript1837.chr11.nic	protein_coding	36594502,36610081,36633284,36648016,36659019	36594641,36610239,36633438,36648155,36659272	Gene ID= ENSG00000166352.15 TPM= 1.93 Transcript Type= NA
chr11	36594502	36659272	36594502	36659272	+	transcript1841.chr11.nic@C11orf74	transcript1841.chr11.nic	protein_coding	36594502,36610081,36648016,36659019	36594641,36610239,36648155,36659272	Gene ID= ENSG00000166352.15 TPM= 4.83 Transcript Type= NA
chr11	36594513	36659272	36594513	36659272	+	ENST00000347206.8@C11orf74	ENST00000347206.8	protein_coding	36594513,36610081,36648016,36659019	36594592,36610239,36648155,36659272	Gene ID= ENSG00000166352.15 TPM= 5.79 Transcript Type= protein_coding
chr11	36594516	36659274	36594516	36659274	+	ENST00000534635.5@C11orf74	ENST00000534635.5	protein_coding	36594516,36610081,36648016,36659019	36594761,36610239,36648155,36659274	Gene ID= ENSG00000166352.15 TPM= 2.9 Transcript Type= protein_coding
chr11	43311975	43344529	43311975	43344529	+	transcript1872.chr11.nic@API5	transcript1872.chr11.nic	protein_coding	43311975,43318421,43318640,43320821,43321411,43321985,43323430,43326507,43327789,43328712,43329965,43330508,43335278,43335858,43342433	43312196,43318482,43318801,43320914,43321476,43322136,43323636,43326611,43327878,43328893,43330058,43330564,43335354,43335994,43344529	Gene ID= ENSG00000166181.12 TPM= 4.83 Transcript Type= NA
chr11	43312014	43325120	43312014	43325120	+	transcript1898.chr11.nic@API5	transcript1898.chr11.nic	protein_coding	43312014,43318640,43320821,43321411,43321985,43323430	43312196,43318801,43320914,43321476,43322136,43325120	Gene ID= ENSG00000166181.12 TPM= 3.86 Transcript Type= NA
chr11	43312003	43344529	43312003	43344529	+	ENST00000378852.7@API5	ENST00000378852.7	protein_coding	43312003,43318640,43320821,43321411,43321985,43323430,43326507,43327789,43328712,43329965,43330508,43335278,43335858,43342433	43312196,43318801,43320914,43321476,43322136,43323636,43326611,43327878,43328893,43330058,43330564,43335354,43335994,43344529	Gene ID= ENSG00000166181.12 TPM= 116.8 Transcript Type= protein_coding
chr11	43358920	43493961	43358920	43493961	+	transcript1850.chr11.nic@TTC17	transcript1850.chr11.nic	protein_coding	43358920,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43448002,43450082,43451182,43490239,43492020,43493773	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43448122,43450241,43451265,43490358,43492163,43493961	Gene ID= ENSG00000052841.14 TPM= 33.98 Transcript Type= NA
chr11	43358920	43402031	43358920	43402031	+	transcript1891.chr11.nic@TTC17	transcript1891.chr11.nic	protein_coding	43358920,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43402031	Gene ID= ENSG00000052841.14 TPM= 24.13 Transcript Type= NA
chr11	43358920	43402031	43358920	43402031	+	transcript1893.chr11.nnic@TTC17	transcript1893.chr11.nnic	protein_coding	43358920,43379233,43389652,43391465,43391821,43396709,43397347,43398025,43399888,43401446	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43402031	Gene ID= ENSG00000052841.14 TPM= 2.9 Transcript Type= NA
chr11	43358932	43446719	43358932	43446719	+	ENST00000299240.10@TTC17	ENST00000299240.10	protein_coding	43358932,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43445931	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43446719	Gene ID= ENSG00000052841.14 TPM= 5.02 Transcript Type= protein_coding
chr11	43680558	43856610	43680558	43856610	+	ENST00000278353.9@HSD17B12	ENST00000278353.9	protein_coding	43680558,43750911,43754046,43798320,43815437,43816347,43830976,43838317,43839999,43854715,43855144	43680987,43750957,43754121,43798427,43815501,43816391,43831010,43838398,43840064,43854864,43856610	Gene ID= ENSG00000149084.12 TPM= 109.56 Transcript Type= protein_coding
chr11	43680794	43856617	43680794	43856617	+	transcript1906.chr11.nic@HSD17B12	transcript1906.chr11.nic	protein_coding	43680794,43750911,43754046,43798320,43815437,43816347,43830976,43838317,43839999,43854715,43855144	43681183,43750957,43754121,43798427,43815501,43816391,43831010,43838398,43840064,43854864,43856617	Gene ID= ENSG00000149084.12 TPM= 9.17 Transcript Type= NA
chr11	43880831	43920266	43880831	43920266	+	transcript1915.chr11.nic@ALKBH3	transcript1915.chr11.nic	protein_coding	43880831,43882583,43883085,43883983,43886606,43889725,43892041,43901516,43919038,43919918	43881446,43882731,43883188,43884017,43886653,43889828,43892129,43901725,43919136,43920266	Gene ID= ENSG00000166199.12 TPM= 3.86 Transcript Type= NA
chr11	43942590	43943883	43942590	43943883	+	ENST00000617612.1@C11orf96	ENST00000617612.1	protein_coding	43942590	43943883	Gene ID= ENSG00000187479.5 TPM= 27.03 Transcript Type= protein_coding
chr11	44095549	44244932	44095549	44244932	+	ENST00000533608.5@EXT2	ENST00000533608.5	protein_coding	44095549,44107683,44109194,44114185,44124789,44126816,44130045,44171611,44197829,44206793,44232353,44234115,44236293,44244149	44095852,44108248,44109283,44114301,44124984,44126955,44130138,44171742,44198018,44206959,44232496,44234243,44236375,44244932	Gene ID= ENSG00000151348.13 TPM= 52.13 Transcript Type= protein_coding
chr11	44214261	44219362	44214261	44219362	+	transcript1933.chr11.nnic@NA	transcript1933.chr11.nnic	NA	44214261	44219362	Gene ID= novel_gene_chr11_1934 TPM= 2.9 Transcript Type= NA
chr11	44727112	44931332	44727112	44931332	+	ENST00000520358.6@TSPAN18	ENST00000520358.6	protein_coding	44727112,44764426,44860328,44906407,44909705,44917972,44919214,44919817,44926674,44929131	44727287,44764512,44860469,44906479,44909899,44918046,44919312,44919999,44926757,44931332	Gene ID= ENSG00000157570.11 TPM= 3.86 Transcript Type= protein_coding
chr11	45146482	45214713	45146482	45214713	+	transcript1943.chr11.nic@PRDM11	transcript1943.chr11.nic	protein_coding	45146482,45181761,45182246,45182861,45204711,45208874,45212469	45146877,45181885,45182349,45183123,45204778,45209295,45214713	Gene ID= ENSG00000019485.13 TPM= 4.34 Transcript Type= NA
chr11	45180676	45214713	45180676	45214713	+	transcript1944.chr11.nnic@PRDM11	transcript1944.chr11.nnic	protein_coding	45180676,45181761,45182246,45182861,45204711,45208874,45212469	45181167,45181885,45182349,45183123,45204778,45209295,45214713	Gene ID= ENSG00000019485.13 TPM= 13.03 Transcript Type= NA
chr11	45648877	45665661	45648877	45665661	-	transcript1948.chr11.nnic@CHST1	transcript1948.chr11.nnic	protein_coding	45665178,45652521,45651993,45648877	45665661,45652667,45652090,45650965	Gene ID= ENSG00000175264.7 TPM= 1.93 Transcript Type= NA
chr11	45648877	45665622	45648877	45665622	-	ENST00000308064.6@CHST1	ENST00000308064.6	protein_coding	45665178,45652521,45651993,45648877	45665622,45652606,45652090,45650965	Gene ID= ENSG00000175264.7 TPM= 8.69 Transcript Type= protein_coding
chr11	45737522	45741158	45737522	45741158	-	transcript1954.chr11.nnic@NA	transcript1954.chr11.nnic	NA	45741098,45740824,45737522	45741158,45740935,45739263	Gene ID= novel_gene_chr11_1955 TPM= 19.95 Transcript Type= NA
chr11	45771432	45772358	45771432	45772358	+	ENST00000378779.4@DKFZp779M0652	ENST00000378779.4	lincRNA	45771432,45771993	45771714,45772358	Gene ID= ENSG00000205106.4 TPM= 6.76 Transcript Type= lincRNA
chr11	45804406	45813015	45804406	45813015	+	ENST00000314134.3@SLC35C1	ENST00000314134.3	protein_coding	45804406,45810776	45806336,45813015	Gene ID= ENSG00000181830.8 TPM= 28.96 Transcript Type= protein_coding
chr11	45847423	45883244	45847423	45883244	+	transcript1966.chr11.nnic@CRY2	transcript1966.chr11.nnic	protein_coding	45847423,45855982,45858731,45860848,45862060,45867612,45869506,45870053,45870330,45870842,45872092,45880914,45882149	45847705,45856090,45858873,45861032,45862148,45867752,45869817,45870204,45870532,45870934,45872233,45882057,45883244	Gene ID= ENSG00000121671.11 TPM= 7.72 Transcript Type= NA
chr11	45910174	45913116	45910174	45913116	-	transcript1983.chr11.nnic@PEX16	transcript1983.chr11.nnic	protein_coding	45912789,45910898,45910174	45913116,45911794,45910312	Gene ID= ENSG00000121680.15 TPM= 2.41 Transcript Type= NA
chr11	45910174	45918055	45910174	45918055	-	ENST00000378750.9@PEX16	ENST00000378750.9	protein_coding	45917700,45917458,45916227,45915703,45915468,45914604,45914316,45914131,45913819,45910898,45910174	45918055,45917493,45916303,45915836,45915568,45914684,45914468,45914203,45913938,45910962,45910312	Gene ID= ENSG00000121680.15 TPM= 23.65 Transcript Type= protein_coding
chr11	45932566	46121178	45932566	46121178	-	ENST00000323180.10@PHF21A	ENST00000323180.10	protein_coding	46120935,46092183,46084166,46079134,46076754,45979760,45971116,45969815,45965315,45953527,45950206,45949402,45948886,45946076,45938157,45936494,45935636,45932566	46121178,46092223,46084302,46079166,46076819,45979966,45971367,45969904,45965608,45953625,45950257,45949481,45948946,45946098,45938312,45936569,45935739,45934225	Gene ID= ENSG00000135365.15 TPM= 5.79 Transcript Type= protein_coding
chr11	46120232	46120700	46120232	46120700	-	transcript1985.chr11.nnic@NA	transcript1985.chr11.nnic	NA	46120232	46120700	Gene ID= novel_gene_chr11_1986 TPM= 1.93 Transcript Type= NA
chr11	46277661	46321422	46277661	46321422	+	ENST00000621158.4@CREB3L1	ENST00000621158.4	protein_coding	46277661,46299935,46307816,46309989,46311032,46312325,46312612,46312851,46316286,46317361,46320264,46320710	46278213,46300163,46308000,46310067,46311189,46312474,46312670,46312919,46316385,46317487,46320528,46321422	Gene ID= ENSG00000157613.10 TPM= 2.9 Transcript Type= protein_coding
chr11	46347445	46369198	46347445	46369198	+	transcript1997.chr11.nic@DGKZ	transcript1997.chr11.nic	protein_coding	46347445,46367291,46367652,46368002	46347820,46367399,46367747,46369198	Gene ID= ENSG00000149091.15 TPM= 1.93 Transcript Type= NA
chr11	46366701	46369198	46366701	46369198	+	transcript1998.chr11.nic@DGKZ	transcript1998.chr11.nic	protein_coding	46366701,46367652,46368002	46367399,46367747,46369198	Gene ID= ENSG00000149091.15 TPM= 1.93 Transcript Type= NA
chr11	46366455	46369175	46366455	46369175	+	transcript1999.chr11.nic@DGKZ	transcript1999.chr11.nic	protein_coding	46366455,46367652	46367399,46369175	Gene ID= ENSG00000149091.15 TPM= 1.93 Transcript Type= NA
chr11	46361595	46380554	46361595	46380554	+	ENST00000454345.5@DGKZ	ENST00000454345.5	protein_coding	46361595,46366244,46367291,46367652,46368005,46369494,46369941,46371313,46371487,46371704,46372075,46372428,46372617,46372771,46372961,46374157,46374399,46374604,46374766,46374934,46375432,46375851,46376066,46376328,46376524,46377073,46378198,46378457,46378991,46379203,46379469,46379831	46361706,46366984,46367399,46367747,46368079,46369550,46370009,46371384,46371603,46371775,46372170,46372510,46372677,46372884,46373101,46374235,46374454,46374666,46374839,46375045,46375631,46375951,46376145,46376397,46376564,46377212,46378229,46378500,46379111,46379236,46379568,46380554	Gene ID= ENSG00000149091.15 TPM= 81.09 Transcript Type= protein_coding
chr11	46350857	46354888	46350857	46354888	-	transcript2001.chr11.nnic@NA	transcript2001.chr11.nnic	NA	46350857	46354888	Gene ID= novel_gene_chr11_2002 TPM= 4.83 Transcript Type= NA
chr11	46396415	46591423	46396415	46591423	-	ENST00000458649.6@AMBRA1	ENST00000458649.6	protein_coding	46591125,46548246,46547817,46547113,46545604,46543975,46541945,46512727,46508191,46494124,46493608,46443488,46434849,46433474,46417913,46410276,46408513,46396415	46591423,46548500,46547875,46547296,46545776,46544041,46543398,46512813,46508370,46494204,46493708,46443598,46435037,46433628,46418052,46410368,46408706,46397943	Gene ID= ENSG00000110497.14 TPM= 3.21 Transcript Type= protein_coding
chr11	46396414	46543247	46396414	46543247	-	transcript2008.chr11.nic@AMBRA1	transcript2008.chr11.nic	protein_coding	46541945,46508191,46494124,46493608,46443488,46434849,46433474,46417913,46410276,46408513,46396414	46543247,46508370,46494204,46493708,46443598,46435037,46433628,46418052,46410368,46408706,46397943	Gene ID= ENSG00000110497.14 TPM= 4.18 Transcript Type= NA
chr11	46396414	46593948	46396414	46593948	-	ENST00000533727.5@AMBRA1	ENST00000533727.5	protein_coding	46593828,46548246,46547817,46547113,46545604,46543975,46543252,46541945,46508191,46494124,46493608,46443488,46434849,46433474,46417913,46410276,46408513,46396414	46593948,46548500,46547875,46547296,46545776,46544041,46543398,46542981,46508370,46494204,46493708,46443598,46435037,46433628,46418052,46410368,46408706,46397943	Gene ID= ENSG00000110497.14 TPM= 5.15 Transcript Type= protein_coding
chr11	46428653	46429150	46428653	46429150	-	ENST00000467930.1@AC024293.1	ENST00000467930.1	processed_pseudogene	46428653	46429150	Gene ID= ENSG00000244313.3 TPM= 17.38 Transcript Type= processed_pseudogene
chr11	46602861	46617227	46602861	46617227	-	ENST00000326737.3@HARBI1	ENST00000326737.3	protein_coding	46617124,46615568,46602861	46617227,46616381,46603909	Gene ID= ENSG00000180423.4 TPM= 3.86 Transcript Type= protein_coding
chr11	46603176	46616862	46603176	46616862	+	transcript2009.chr11.nnic@NA	transcript2009.chr11.nnic	NA	46603176,46615568,46616503	46603911,46616383,46616862	Gene ID= novel_gene_chr11_2010 TPM= 8.69 Transcript Type= NA
chr11	46617543	46673041	46617543	46673041	+	transcript2014.chr11.nic@ATG13	transcript2014.chr11.nic	protein_coding	46617543,46630045,46644279,46645339,46645870,46649137,46650177,46656233,46657095,46657524,46659392,46663997,46664849,46665383,46667773,46668499,46668794,46669404,46672255	46617890,46630100,46644360,46645419,46645989,46649183,46650317,46656273,46657191,46657622,46659485,46664095,46664959,46665519,46667887,46668576,46668910,46669532,46673041	Gene ID= ENSG00000175224.16 TPM= 6.76 Transcript Type= NA
chr11	46677080	46700599	46677080	46700599	-	ENST00000311956.8@ARHGAP1	ENST00000311956.8	protein_coding	46700551,46695975,46695660,46688173,46682051,46681293,46681011,46680640,46680487,46680205,46679648,46679365,46677080	46700599,46696156,46695755,46688260,46682182,46681379,46681109,46680747,46680563,46680282,46679776,46679468,46679225	Gene ID= ENSG00000175220.11 TPM= 87.84 Transcript Type= protein_coding
chr11	46700818	46705912	46700818	46705912	+	ENST00000311764.2@ZNF408	ENST00000311764.2	protein_coding	46700818,46701399,46702704,46702984,46704353	46701099,46701676,46702765,46703243,46705912	Gene ID= ENSG00000175213.2 TPM= 33.79 Transcript Type= protein_coding
chr11	46743536	46846308	46743536	46846308	-	ENST00000312055.9@CKAP5	ENST00000312055.9	protein_coding	46846220,46821175,46818310,46816198,46811007,46809742,46809400,46808031,46801200,46798083,46797805,46796812,46795594,46790470,46790076,46788681,46784488,46783274,46780428,46780194,46778460,46778139,46777439,46776255,46770788,46769963,46767575,46765131,46763481,46762976,46762627,46762000,46760612,46759269,46758923,46753310,46752635,46751346,46751118,46750528,46750274,46744426,46743536	46846308,46821268,46818503,46816404,46811178,46809874,46809500,46808144,46801304,46798172,46797969,46796940,46795776,46790583,46790186,46788773,46784673,46783368,46780485,46780319,46778599,46778313,46777552,46776383,46770982,46770098,46767663,46765256,46763630,46763179,46762762,46762193,46760784,46759442,46759043,46753497,46752710,46751534,46751255,46750611,46750433,46744577,46744265	Gene ID= ENSG00000175216.14 TPM= 14.48 Transcript Type= protein_coding
chr11	46936747	47162228	46936747	47162228	+	ENST00000278460.11@C11orf49	ENST00000278460.11	protein_coding	46936747,46987208,47052388,47137645,47155176,47157023,47157813,47161127,47161464	46936851,46987310,47052518,47137729,47155261,47157218,47157922,47161190,47162228	Gene ID= ENSG00000149179.13 TPM= 6.76 Transcript Type= protein_coding
chr11	46936768	47162247	46936768	47162247	+	ENST00000395460.6@C11orf49	ENST00000395460.6	protein_coding	46936768,46987208,47052388,47137645,47155176,47157023,47157813,47161127	46936851,46987310,47052518,47137729,47155261,47157218,47157922,47162247	Gene ID= ENSG00000149179.13 TPM= 1.93 Transcript Type= protein_coding
chr11	47164301	47185579	47164301	47185579	-	transcript2038.chr11.nic@ARFGAP2	transcript2038.chr11.nic	protein_coding	47185266,47183004,47182674,47182403,47180455,47180186,47179411,47179159,47178894,47178366,47176782,47176516,47175851,47175182,47175015,47173759,47173426,47172710,47172281,47171664,47171426,47168123,47167909,47166760,47166506,47166268,47164301	47185579,47183069,47182764,47182559,47180690,47180341,47179586,47179279,47179030,47178487,47178046,47176634,47175923,47175313,47175098,47173840,47173482,47172751,47172333,47171800,47171557,47168251,47168043,47166886,47166599,47166386,47165502	Gene ID= ENSG00000149182.14 TPM= 167.63 Transcript Type= NA
chr11	47164301	47177082	47164301	47177082	-	ENST00000524782.5@ARFGAP2	ENST00000524782.5	protein_coding	47176782,47176516,47175851,47175182,47175015,47173759,47173426,47172281,47171664,47171426,47168123,47167909,47166760,47166506,47166268,47164301	47177082,47176634,47175923,47175313,47175098,47173840,47173482,47172333,47171800,47171557,47168251,47168043,47166886,47166599,47166386,47165502	Gene ID= ENSG00000149182.14 TPM= 82.05 Transcript Type= protein_coding
chr11	47177557	47186440	47177557	47186440	-	ENST00000532457.5@PACSIN3	ENST00000532457.5	protein_coding	47186349,47183004,47182674,47182403,47180455,47180186,47179411,47179155,47178894,47178366,47177557	47186440,47183069,47182764,47182559,47180690,47180341,47179586,47179279,47179027,47178487,47178046	Gene ID= ENSG00000165912.15 TPM= 256.91 Transcript Type= nonsense_mediated_decay
chr11	47185644	47187191	47185644	47187191	+	transcript2078.chr11.nnic@NA	transcript2078.chr11.nnic	NA	47185644	47187191	Gene ID= novel_gene_chr11_2079 TPM= 6.76 Transcript Type= NA
chr11	47185469	47187665	47185469	47187665	+	transcript2082.chr11.nnic@NA	transcript2082.chr11.nnic	NA	47185469	47187665	Gene ID= novel_gene_chr11_2083 TPM= 1.93 Transcript Type= NA
chr11	47214942	47239240	47214942	47239240	+	ENST00000256996.8@DDB2	ENST00000256996.8	protein_coding	47214942,47216336,47216858,47232814,47234573,47234757,47235270,47237837,47238138,47238800	47215263,47216472,47217049,47232959,47234672,47234934,47235412,47238001,47238183,47239240	Gene ID= ENSG00000134574.11 TPM= 4.83 Transcript Type= protein_coding
chr11	47239302	47248906	47239302	47248906	-	ENST00000256997.7@ACP2	ENST00000256997.7	protein_coding	47248676,47248038,47247641,47245682,47245474,47245305,47244735,47243239,47243018,47242723,47239302	47248906,47248133,47247727,47245834,47245572,47245394,47244867,47243321,47243124,47242898,47240249	Gene ID= ENSG00000134575.9 TPM= 11.58 Transcript Type= protein_coding
chr11	47270164	47330031	47270164	47330031	+	transcript2097.chr11.nic@MADD	transcript2097.chr11.nic	protein_coding	47270164,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47288968,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47328658,47329046	47270246,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285065,47285590,47286534,47289027,47289493,47290053,47290299,47290816,47293983,47295567,47296055,47308699,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47328704,47330031	Gene ID= ENSG00000110514.19 TPM= 6.76 Transcript Type= NA
chr11	47354860	47378576	47354860	47378576	-	ENST00000378538.7@SPI1	ENST00000378538.7	protein_coding	47378309,47375633,47359853,47358844,47354860	47378576,47375729,47360040,47359006,47355546	Gene ID= ENSG00000066336.11 TPM= 2.9 Transcript Type= protein_coding
chr11	47408549	47416495	47408549	47416495	+	transcript2115.chr11.nic@SLC39A13	transcript2115.chr11.nic	protein_coding	47408549,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060,47415288,47416325	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47415496,47416495	Gene ID= ENSG00000165915.13 TPM= 3.38 Transcript Type= NA
chr11	47408486	47416496	47408486	47416496	+	transcript2122.chr11.nic@SLC39A13	transcript2122.chr11.nic	protein_coding	47408486,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060,47415288	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47416496	Gene ID= ENSG00000165915.13 TPM= 41.92 Transcript Type= NA
chr11	47408486	47416496	47408486	47416496	+	transcript2123.chr11.nnic@SLC39A13	transcript2123.chr11.nnic	protein_coding	47408486,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060,47416325	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47416496	Gene ID= ENSG00000165915.13 TPM= 11.1 Transcript Type= NA
chr11	47408486	47416496	47408486	47416496	+	transcript2127.chr11.nic@SLC39A13	transcript2127.chr11.nic	protein_coding	47408486,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47416496	Gene ID= ENSG00000165915.13 TPM= 14.89 Transcript Type= NA
chr11	47408598	47416496	47408598	47416496	+	transcript2129.chr11.nnic@SLC39A13	transcript2129.chr11.nnic	protein_coding	47408598,47410087,47411926,47412346,47413400,47413597,47414425,47415060,47415288	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47415159,47416496	Gene ID= ENSG00000165915.13 TPM= 4.28 Transcript Type= NA
chr11	47408629	47416501	47408629	47416501	+	ENST00000362021.8@SLC39A13	ENST00000362021.8	protein_coding	47408629,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415039,47415288	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47416501	Gene ID= ENSG00000165915.13 TPM= 2.35 Transcript Type= protein_coding
chr11	47418769	47426473	47418769	47426473	-	ENST00000619920.4@PSMC3	ENST00000619920.4	protein_coding	47426205,47425867,47425121,47424607,47424429,47424046,47422830,47422574,47420631,47420264,47419116,47418769	47426473,47425950,47425246,47424711,47424491,47424183,47422973,47422722,47420727,47420409,47419197,47418945	Gene ID= ENSG00000165916.8 TPM= 392.21 Transcript Type= protein_coding
chr11	47437757	47449178	47437757	47449178	-	ENST00000298854.6@RAPSN	ENST00000298854.6	protein_coding	47448773,47447812,47442656,47441823,47441611,47441159,47438732,47437757	47449178,47448150,47442814,47441921,47441733,47441212,47438931,47438047	Gene ID= ENSG00000165917.9 TPM= 122.86 Transcript Type= protein_coding
chr11	47437764	47449171	47437764	47449171	-	transcript2142.chr11.nnic@RAPSN	transcript2142.chr11.nnic	protein_coding	47448773,47447812,47442656,47441823,47441611,47441159,47438732,47437764	47449171,47448150,47442814,47441921,47441733,47441297,47438931,47438047	Gene ID= ENSG00000165917.9 TPM= 12.81 Transcript Type= NA
chr11	47437764	47449171	47437764	47449171	-	transcript2155.chr11.nnic@RAPSN	transcript2155.chr11.nnic	protein_coding	47448773,47447812,47442656,47441823,47441611,47438732,47437764	47449171,47448150,47442814,47441921,47441733,47438931,47438047	Gene ID= ENSG00000165917.9 TPM= 42.73 Transcript Type= NA
chr11	47437764	47449171	47437764	47449171	-	transcript2156.chr11.nic@RAPSN	transcript2156.chr11.nic	protein_coding	47448773,47447812,47442656,47441823,47441611,47441159,47437764	47449171,47448150,47442814,47441921,47441733,47441212,47438931	Gene ID= ENSG00000165917.9 TPM= 28.38 Transcript Type= NA
chr11	47440756	47449171	47440756	47449171	-	transcript2182.chr11.nic@RAPSN	transcript2182.chr11.nic	protein_coding	47448773,47447812,47442656,47441823,47440756	47449171,47448150,47442814,47441921,47441733	Gene ID= ENSG00000165917.9 TPM= 10.62 Transcript Type= NA
chr11	47437765	47449136	47437765	47449136	-	ENST00000524487.5@RAPSN	ENST00000524487.5	protein_coding	47448773,47447812,47441823,47441611,47441159,47438732,47437765	47449136,47448150,47441921,47441733,47441212,47438931,47438047	Gene ID= ENSG00000165917.9 TPM= 4.94 Transcript Type= protein_coding
chr11	47437764	47449143	47437764	47449143	-	ENST00000352508.7@RAPSN	ENST00000352508.7	protein_coding	47448773,47447812,47442656,47441823,47438732,47437764	47449143,47448150,47442814,47441921,47438931,47438047	Gene ID= ENSG00000165917.9 TPM= 7.02 Transcript Type= protein_coding
chr11	47470316	47553162	47470316	47553162	-	transcript2202.chr11.nnic@CELF1	transcript2202.chr11.nnic	protein_coding	47552992,47506858,47500861,47499453,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470316	47553162,47506897,47500932,47499604,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47472102	Gene ID= ENSG00000149187.18 TPM= 3.86 Transcript Type= NA
chr11	47470329	47553162	47470329	47553162	-	transcript2210.chr11.nnic@CELF1	transcript2210.chr11.nnic	protein_coding	47552992,47506858,47500861,47499453,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470329	47553162,47506897,47500932,47499604,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47470555	Gene ID= ENSG00000149187.18 TPM= 2.9 Transcript Type= NA
chr11	47470316	47553162	47470316	47553162	-	transcript2220.chr11.nnic@CELF1	transcript2220.chr11.nnic	protein_coding	47552992,47506858,47500861,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470316	47553162,47506897,47500932,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47472102	Gene ID= ENSG00000149187.18 TPM= 7.72 Transcript Type= NA
chr11	47470316	47553156	47470316	47553156	-	transcript2237.chr11.nic@CELF1	transcript2237.chr11.nic	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470316	47553156,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47472102	Gene ID= ENSG00000149187.18 TPM= 2.9 Transcript Type= NA
chr11	47465933	47553117	47465933	47553117	-	ENST00000310513.10@CELF1	ENST00000310513.10	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47465933	47553117,47489024,47487241,47486798,47484523,47483532,47482856,47478940,47477425,47476956,47475521,47473231,47472357,47468891	Gene ID= ENSG00000149187.18 TPM= 28.48 Transcript Type= protein_coding
chr11	47579010	47584562	47579010	47584562	+	ENST00000263774.8@NDUFS3	ENST00000263774.8	protein_coding	47579010,47579269,47580525,47580835,47582088,47582349,47584314	47579158,47579334,47580622,47580984,47582213,47582468,47584562	Gene ID= ENSG00000213619.9 TPM= 168.93 Transcript Type= protein_coding
chr11	47565458	47572360	47565458	47572360	+	ENST00000534775.1@PTPMT1	ENST00000534775.1	protein_coding	47565458,47569700,47571471	47565986,47569891,47572360	Gene ID= ENSG00000110536.13 TPM= 1.93 Transcript Type= protein_coding
chr11	47565601	47571769	47565601	47571769	+	ENST00000326674.9@PTPMT1	ENST00000326674.9	protein_coding	47565601,47565906,47569700,47571471	47565796,47565986,47569891,47571769	Gene ID= ENSG00000110536.13 TPM= 27.03 Transcript Type= protein_coding
chr11	47572198	47578969	47572198	47578969	-	ENST00000395288.6@KBTBD4	ENST00000395288.6	protein_coding	47578828,47577411,47575593,47572198	47578969,47578028,47575699,47573790	Gene ID= ENSG00000123444.13 TPM= 4.83 Transcript Type= protein_coding
chr11	47572197	47578976	47572197	47578976	-	transcript2259.chr11.nic@KBTBD4	transcript2259.chr11.nic	protein_coding	47578933,47577411,47575593,47572197	47578976,47578055,47575699,47573790	Gene ID= ENSG00000123444.13 TPM= 6.76 Transcript Type= NA
chr11	47572227	47579015	47572227	47579015	-	ENST00000430070.6@KBTBD4	ENST00000430070.6	protein_coding	47578933,47577411,47575593,47572227	47579015,47578028,47575699,47573790	Gene ID= ENSG00000123444.13 TPM= 68.54 Transcript Type= protein_coding
chr11	47617316	47642623	47617316	47642623	-	ENST00000302503.7@MTCH2	ENST00000302503.7	protein_coding	47642379,47638967,47638699,47635545,47634672,47631654,47631036,47630555,47628953,47627080,47625674,47622701,47617316	47642623,47639051,47638805,47635571,47634734,47631711,47631087,47630614,47629046,47627127,47625741,47622776,47618919	Gene ID= ENSG00000109919.9 TPM= 49.23 Transcript Type= protein_coding
chr11	47716517	47767323	47716517	47767323	-	transcript2284.chr11.nic@FNBP4	transcript2284.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47731374,47724468,47724028,47722976,47719929,47716517	47767323,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 3.86 Transcript Type= NA
chr11	47722982	47767297	47722982	47767297	-	transcript2287.chr11.nic@FNBP4	transcript2287.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732117,47731374,47724468,47724028,47722982	47767297,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47731561,47724778,47724172,47723316	Gene ID= ENSG00000109920.12 TPM= 1.93 Transcript Type= NA
chr11	47722982	47767333	47722982	47767333	-	transcript2288.chr11.nic@FNBP4	transcript2288.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47731374,47724468,47724028,47722982	47767333,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47731561,47724778,47724172,47723316	Gene ID= ENSG00000109920.12 TPM= 1.93 Transcript Type= NA
chr11	47728849	47767321	47728849	47767321	-	transcript2289.chr11.nic@FNBP4	transcript2289.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47731374,47728849	47767321,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47731561,47730190	Gene ID= ENSG00000109920.12 TPM= 1.93 Transcript Type= NA
chr11	47716517	47767301	47716517	47767301	-	ENST00000263773.9@FNBP4	ENST00000263773.9	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47731374,47724468,47724028,47722976,47719929,47716517	47767301,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47731561,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 13.51 Transcript Type= protein_coding
chr11	47821376	47848326	47821376	47848326	-	transcript2308.chr11.nic@NUP160	transcript2308.chr11.nic	protein_coding	47848219,47847848,47840378,47839843,47837545,47836887,47835651,47822087,47821376	47848326,47847959,47840588,47840065,47837623,47837001,47835809,47822164,47821821	Gene ID= ENSG00000030066.13 TPM= 1.93 Transcript Type= NA
chr11	47839502	47848340	47839502	47848340	-	transcript2312.chr11.nic@NUP160	transcript2312.chr11.nic	protein_coding	47848219,47847848,47840378,47839502	47848340,47847959,47840588,47840065	Gene ID= ENSG00000030066.13 TPM= 1.93 Transcript Type= NA
chr11	47792012	47848334	47792012	47848334	-	ENST00000528071.5@NUP160	ENST00000528071.5	protein_coding	47848219,47847848,47840378,47839843,47837545,47836887,47835651,47822087,47821724,47819374,47818056,47815946,47815479,47813316,47812882,47812302,47812064,47808396,47807070,47806153,47804549,47803438,47801811,47798368,47798168,47797978,47797779,47792012	47848334,47847959,47840588,47840065,47837623,47837001,47835809,47822164,47821821,47819458,47818124,47816029,47815649,47813415,47813047,47812429,47812224,47808529,47807140,47806312,47804618,47803536,47801930,47798463,47798262,47798074,47797884,47792946	Gene ID= ENSG00000030066.13 TPM= 1.93 Transcript Type= protein_coding
chr11	57233593	57237201	57233593	57237201	-	ENST00000606794.1@APLNR	ENST00000606794.1	protein_coding	57233593	57237201	Gene ID= ENSG00000134817.10 TPM= 8.69 Transcript Type= protein_coding
chr11	57299642	57311564	57299642	57311564	-	transcript2344.chr11.nic@TNKS1BP1	transcript2344.chr11.nic	protein_coding	57311238,57308395,57302459,57302074,57301807,57300884,57300528,57299642	57311564,57310556,57302825,57302224,57301943,57301041,57300600,57300081	Gene ID= ENSG00000149115.13 TPM= 134.49 Transcript Type= NA
chr11	57299642	57324927	57299642	57324927	-	ENST00000358252.7@TNKS1BP1	ENST00000358252.7	protein_coding	57324840,57321792,57320079,57317818,57312534,57308395,57302459,57302074,57301807,57300884,57300528,57299642	57324927,57321950,57320712,57317887,57313889,57310556,57302825,57302224,57301943,57301041,57300600,57300081	Gene ID= ENSG00000149115.13 TPM= 258.7 Transcript Type= protein_coding
chr11	57299638	57324952	57299638	57324952	-	ENST00000528882.5@TNKS1BP1	ENST00000528882.5	protein_coding	57324840,57321792,57320065,57317818,57312534,57308891,57299638	57324952,57321950,57320712,57317887,57313889,57310556,57299961	Gene ID= ENSG00000149115.13 TPM= 7.45 Transcript Type= nonsense_mediated_decay
chr11	57327425	57335881	57327425	57335881	-	transcript2362.chr11.nic@SSRP1	transcript2362.chr11.nic	protein_coding	57335730,57335068,57334463,57333435,57332959,57332625,57332383,57332152,57331668,57330855,57330291,57330093,57328297,57327712,57327425	57335881,57335240,57334648,57333540,57333149,57332855,57332486,57332280,57331889,57330927,57330429,57330138,57328426,57327882,57327514	Gene ID= ENSG00000149136.8 TPM= 12.55 Transcript Type= NA
chr11	57325985	57335877	57325985	57335877	-	ENST00000278412.6@SSRP1	ENST00000278412.6	protein_coding	57335730,57335068,57334463,57333435,57332959,57332625,57332383,57332152,57331668,57330855,57330291,57330093,57328297,57327712,57327426,57326703,57325985	57335877,57335240,57334648,57333540,57333149,57332855,57332486,57332280,57331889,57330927,57330429,57330138,57328426,57327882,57327514,57326889,57326478	Gene ID= ENSG00000149136.8 TPM= 128.39 Transcript Type= protein_coding
chr11	57406956	57427121	57406956	57427121	-	ENST00000395124.5@SLC43A3	ENST00000395124.5	protein_coding	57427062,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406956	57427121,57426652,57426352,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896	Gene ID= ENSG00000134802.17 TPM= 9.65 Transcript Type= protein_coding
chr11	57528463	57530765	57528463	57530765	-	ENST00000257245.8@TIMM10	ENST00000257245.8	protein_coding	57530658,57530119,57528463	57530765,57530234,57528918	Gene ID= ENSG00000134809.8 TPM= 32.82 Transcript Type= protein_coding
chr11	57528641	57530734	57528641	57530734	-	ENST00000525158.1@TIMM10	ENST00000525158.1	protein_coding	57530658,57530119,57528641	57530734,57530293,57528918	Gene ID= ENSG00000134809.8 TPM= 1.93 Transcript Type= protein_coding
chr11	57537544	57550619	57537544	57550619	+	transcript2382.chr11.nnic@SMTNL1	transcript2382.chr11.nnic	protein_coding	57537544,57542641,57543624,57543869,57545881,57546233,57546501,57549968	57537642,57543374,57543756,57543920,57546036,57546347,57546652,57550619	Gene ID= ENSG00000214872.8 TPM= 3.86 Transcript Type= NA
chr11	57551662	57567807	57551662	57567807	-	ENST00000287156.8@UBE2L6	ENST00000287156.8	protein_coding	57567585,57560337,57554437,57551662	57567807,57560432,57554623,57552509	Gene ID= ENSG00000156587.15 TPM= 9.65 Transcript Type= protein_coding
chr11	57551656	57568284	57551656	57568284	-	ENST00000340573.8@UBE2L6	ENST00000340573.8	protein_coding	57567849,57560337,57554437,57551656	57568284,57560432,57554623,57552509	Gene ID= ENSG00000156587.15 TPM= 3.86 Transcript Type= protein_coding
chr11	57597518	57614853	57597518	57614853	+	ENST00000278407.8@SERPING1	ENST00000278407.8	protein_coding	57597518,57598249,57599879,57602035,57606010,57606408,57611717,57614328	57597722,57598321,57600377,57602169,57606213,57606547,57611936,57614853	Gene ID= ENSG00000149131.15 TPM= 42.96 Transcript Type= protein_coding
chr11	57598163	57614847	57598163	57614847	+	transcript2388.chr11.nic@SERPING1	transcript2388.chr11.nic	protein_coding	57598163,57599879,57602035,57606010,57606408,57611717,57614328	57598321,57600377,57602169,57606213,57606547,57611936,57614847	Gene ID= ENSG00000149131.15 TPM= 18.82 Transcript Type= NA
chr11	57657158	57661868	57657158	57661868	+	ENST00000533682.1@CLP1	ENST00000533682.1	protein_coding	57657158,57659455,57660765	57657860,57660082,57661868	Gene ID= ENSG00000172409.5 TPM= 23.17 Transcript Type= protein_coding
chr11	57667823	57701182	57667823	57701182	+	transcript2401.chr11.nic@ZDHHC5	transcript2401.chr11.nic	protein_coding	57667823,57672021,57688508,57690031,57690335,57692611,57693783,57695920,57696761,57698559,57699866	57668187,57673194,57688665,57690203,57690437,57692702,57693915,57696043,57696873,57699418,57701182	Gene ID= ENSG00000156599.10 TPM= 27.03 Transcript Type= NA
chr11	57667896	57701187	57667896	57701187	+	ENST00000287169.7@ZDHHC5	ENST00000287169.7	protein_coding	57667896,57672021,57682422,57688508,57690031,57690335,57692611,57693783,57695920,57696761,57698559,57699866	57668187,57673194,57682543,57688665,57690203,57690437,57692702,57693915,57696043,57696873,57699418,57701187	Gene ID= ENSG00000156599.10 TPM= 54.06 Transcript Type= protein_coding
chr11	57703714	57712323	57703714	57712323	-	ENST00000431606.3@MED19	ENST00000431606.3	protein_coding	57711963,57704973,57704719,57704302,57703714	57712323,57705229,57704815,57704396,57704106	Gene ID= ENSG00000156603.16 TPM= 26.06 Transcript Type= protein_coding
chr11	57712614	57740969	57712614	57740969	+	ENST00000529403.1@TMX2	ENST00000529403.1	protein_coding	57712614,57737608,57737836,57738354,57738664,57738974,57739131,57740099	57712807,57737668,57738026,57738430,57738770,57739039,57739260,57740969	Gene ID= ENSG00000213593.9 TPM= 14.16 Transcript Type= nonsense_mediated_decay
chr11	57712603	57740973	57712603	57740973	+	ENST00000378312.8@TMX2	ENST00000378312.8	protein_coding	57712603,57737608,57738354,57738664,57738974,57739131,57740099	57712807,57737668,57738430,57738770,57739039,57739260,57740973	Gene ID= ENSG00000213593.9 TPM= 13.68 Transcript Type= protein_coding
chr11	57712607	57740973	57712607	57740973	+	ENST00000278422.8@TMX2	ENST00000278422.8	protein_coding	57712607,57737608,57737913,57738354,57738664,57738974,57739131,57740099	57712807,57737668,57738026,57738430,57738770,57739039,57739260,57740973	Gene ID= ENSG00000213593.9 TPM= 52.29 Transcript Type= protein_coding
chr11	57741353	57743038	57741353	57743038	+	ENST00000534355.5@SELENOH	ENST00000534355.5	protein_coding	57741353,57741809,57742117,57742863	57741717,57741954,57742247,57743038	Gene ID= ENSG00000211450.9 TPM= 115.84 Transcript Type= protein_coding
chr11	57761909	57818443	57761909	57818443	+	transcript2434.chr11.nic@CTNND1	transcript2434.chr11.nic	protein_coding	57761909,57789037,57791385,57795577,57796457,57801733,57803621,57804663,57805882,57806461,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57789155,57791673,57795729,57796992,57802196,57803804,57804780,57806035,57806478,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57818443	Gene ID= ENSG00000198561.13 TPM= 1.93 Transcript Type= NA
chr11	57761797	57819178	57761797	57819178	+	ENST00000529986.5@CTNND1	ENST00000529986.5	protein_coding	57761797,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 1.93 Transcript Type= protein_coding
chr11	58526871	58551151	58526871	58551151	-	transcript2439.chr11.nic@LPXN	transcript2439.chr11.nic	protein_coding	58551065,58549973,58549786,58528043,58526871	58551151,58550146,58549867,58528191,58527723	Gene ID= ENSG00000110031.12 TPM= 1.93 Transcript Type= NA
chr11	58579111	58621042	58579111	58621042	+	ENST00000316059.6@ZFP91	ENST00000316059.6	protein_coding	58579111,58584856,58609830,58610298,58610950,58611604,58612278,58612762,58614229,58616716,58617196	58579622,58584884,58610039,58610334,58611054,58611738,58612328,58612840,58614343,58616815,58621042	Gene ID= ENSG00000186660.14 TPM= 34.75 Transcript Type= protein_coding
chr11	59134884	59142733	59134884	59142733	-	transcript2450.chr11.nic@AP001258.1	transcript2450.chr11.nic	lincRNA	59142615,59139957,59134884	59142733,59140167,59136281	Gene ID= ENSG00000245571.6 TPM= 1.93 Transcript Type= NA
chr11	59209075	59212979	59209075	59212979	-	transcript2452.chr11.nnic@NA	transcript2452.chr11.nnic	NA	59209075	59212979	Gene ID= novel_gene_chr11_2453 TPM= 1.93 Transcript Type= NA
chr11	59574398	59616144	59574398	59616144	-	ENST00000263847.5@OSBP	ENST00000263847.5	protein_coding	59615303,59610381,59608484,59601640,59601283,59600819,59600496,59594010,59593604,59581451,59580174,59578149,59576805,59574398	59616144,59610589,59608734,59601838,59601385,59600873,59600627,59594255,59593724,59581554,59580269,59578330,59577025,59576719	Gene ID= ENSG00000110048.11 TPM= 91.22 Transcript Type= protein_coding
chr11	59755059	59802706	59755059	59802706	+	ENST00000337979.8@STX3	ENST00000337979.8	protein_coding	59755059,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59797283,59800855	59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59797396,59802706	Gene ID= ENSG00000166900.16 TPM= 5.07 Transcript Type= protein_coding
chr11	59755343	59805878	59755343	59805878	+	transcript2474.chr11.nnic@STX3	transcript2474.chr11.nnic	protein_coding	59755343,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59803218,59803840	59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59803300,59805878	Gene ID= ENSG00000166900.16 TPM= 1.93 Transcript Type= NA
chr11	59755343	59802701	59755343	59802701	+	transcript2481.chr11.nnic@STX3	transcript2481.chr11.nnic	protein_coding	59755343,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59800855	59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59802701	Gene ID= ENSG00000166900.16 TPM= 4.1 Transcript Type= NA
chr11	59755343	59802702	59755343	59802702	+	transcript2483.chr11.nic@STX3	transcript2483.chr11.nic	protein_coding	59755343,59773211,59788873,59790519,59792107,59793099,59793380,59795372,59800855	59755635,59773294,59788947,59790586,59792215,59793172,59793514,59795482,59802702	Gene ID= ENSG00000166900.16 TPM= 4.1 Transcript Type= NA
chr11	59755343	59802701	59755343	59802701	+	transcript2489.chr11.nnic@STX3	transcript2489.chr11.nnic	protein_coding	59755343,59773211,59790519,59792107,59793099,59793380,59800855	59755635,59773294,59790586,59792215,59793172,59793514,59802701	Gene ID= ENSG00000166900.16 TPM= 2.17 Transcript Type= NA
chr11	59806135	59810872	59806135	59810872	-	ENST00000300151.4@MRPL16	ENST00000300151.4	protein_coding	59810604,59809855,59807701,59806135	59810872,59809920,59807849,59806832	Gene ID= ENSG00000166902.4 TPM= 56.95 Transcript Type= protein_coding
chr11	60172015	60184666	60172015	60184666	-	ENST00000530839.5@MS4A6A	ENST00000530839.5	protein_coding	60184542,60182978,60181581,60179831,60178260,60175402,60173028,60172015	60184666,60183331,60181741,60179965,60178316,60175611,60173129,60172253	Gene ID= ENSG00000110077.14 TPM= 1.93 Transcript Type= protein_coding
chr11	60280586	60308972	60280586	60308972	+	ENST00000337908.4@MS4A4A	ENST00000337908.4	protein_coding	60280586,60292225,60297197,60301001,60302559,60306100,60308107	60280716,60292384,60297325,60301057,60302717,60306201,60308972	Gene ID= ENSG00000110079.16 TPM= 3.86 Transcript Type= protein_coding
chr11	60842071	60851081	60842071	60851081	+	ENST00000227520.9@CCDC86	ENST00000227520.9	protein_coding	60842071,60847924,60849940,60850206	60842882,60848053,60850014,60851081	Gene ID= ENSG00000110104.11 TPM= 109.08 Transcript Type= protein_coding
chr11	60850940	60855971	60850940	60855971	-	ENST00000332539.4@PTGDR2	ENST00000332539.4	protein_coding	60855869,60850940	60855971,60853731	Gene ID= ENSG00000183134.4 TPM= 1.93 Transcript Type= protein_coding
chr11	60890730	60906588	60890730	60906588	-	ENST00000227524.8@PRPF19	ENST00000227524.8	protein_coding	60906364,60903712,60903459,60902740,60902583,60902403,60901499,60901295,60900854,60900582,60899149,60898862,60898541,60898101,60897846,60890730	60906588,60903861,60903535,60902881,60902656,60902465,60901540,60901369,60900929,60900691,60899304,60898931,60898626,60898271,60897951,60891263	Gene ID= ENSG00000110107.8 TPM= 10.62 Transcript Type= protein_coding
chr11	60913874	60923443	60913874	60923443	+	ENST00000227525.7@TMEM109	ENST00000227525.7	protein_coding	60913874,60919686,60920886,60921774	60914268,60919930,60920988,60923443	Gene ID= ENSG00000110108.9 TPM= 83.98 Transcript Type= protein_coding
chr11	60924481	60937159	60924481	60937159	+	ENST00000005286.8@TMEM132A	ENST00000005286.8	protein_coding	60924481,60927204,60927641,60928629,60930510,60931686,60931984,60933542,60934488,60935252,60935864	60924733,60927418,60927859,60928960,60930659,60931884,60932127,60933744,60934764,60935443,60937159	Gene ID= ENSG00000006118.14 TPM= 9.65 Transcript Type= protein_coding
chr11	60937084	60951785	60937084	60951785	-	ENST00000227880.7@SLC15A3	ENST00000227880.7	protein_coding	60950994,60946532,60943689,60942035,60941122,60939480,60937870,60937084	60951785,60946821,60943836,60942145,60941290,60939638,60938025,60937373	Gene ID= ENSG00000110446.10 TPM= 12.55 Transcript Type= protein_coding
chr11	61130256	61161617	61130256	61161617	-	ENST00000301765.9@VPS37C	ENST00000301765.9	protein_coding	61161391,61138737,61134036,61133255,61130256	61161617,61138835,61134207,61133337,61132539	Gene ID= ENSG00000167987.10 TPM= 31.86 Transcript Type= protein_coding
chr11	61299451	61333366	61299451	61333366	-	ENST00000301764.11@DDB1	ENST00000301764.11	protein_coding	61332908,61331543,61329958,61329363,61326779,61325611,61323979,61323011,61322296,61321595,61316492,61316285,61314308,61314047,61313862,61313499,61311989,61311784,61310295,61309796,61308983,61303865,61303046,61302582,61302257,61300809,61299451	61333366,61331691,61330074,61329584,61326893,61325708,61324137,61323094,61322412,61321697,61316567,61316393,61314486,61314210,61313969,61313706,61312084,61311895,61310418,61309960,61309077,61304035,61303155,61302751,61302359,61300932,61300219	Gene ID= ENSG00000167986.13 TPM= 349.44 Transcript Type= protein_coding
chr11	61333251	61346890	61333251	61346890	+	transcript2531.chr11.nic@TKFC	transcript2531.chr11.nic	protein_coding	61333251,61333549,61334620,61337941,61339066,61339254,61341436,61341823,61342461,61342574,61342755,61343342,61343856,61344136,61345260,61345462,61345712,61345857,61346351	61333329,61333650,61334731,61338130,61339176,61339435,61341514,61341912,61342495,61342658,61342844,61343458,61343975,61344273,61345366,61345565,61345745,61345946,61346890	Gene ID= ENSG00000149476.15 TPM= 1.93 Transcript Type= NA
chr11	61333210	61349242	61333210	61349242	+	ENST00000394900.7@TKFC	ENST00000394900.7	protein_coding	61333210,61334620,61337941,61339066,61339254,61341436,61341823,61342461,61342574,61342755,61343342,61343856,61344136,61345260,61345462,61345712,61345857,61346351	61333329,61334731,61338130,61339176,61339435,61341514,61341912,61342495,61342658,61342844,61343458,61343975,61344273,61345366,61345565,61345745,61345946,61349242	Gene ID= ENSG00000149476.15 TPM= 1.93 Transcript Type= protein_coding
chr11	61334280	61346890	61334280	61346890	+	transcript2535.chr11.nic@TKFC	transcript2535.chr11.nic	protein_coding	61334280,61335840,61337941,61339066,61339254,61341436,61341823,61342461,61342574,61342755,61343342,61343856,61344136,61345260,61345462,61345712,61345857,61346351	61334731,61335937,61338130,61339176,61339435,61341514,61341912,61342495,61342658,61342844,61343458,61343975,61344273,61345366,61345565,61345745,61345946,61346890	Gene ID= ENSG00000149476.15 TPM= 1.93 Transcript Type= NA
chr11	61348805	61362268	61348805	61362268	-	transcript2547.chr11.nic@CYB561A3	transcript2547.chr11.nic	protein_coding	61361733,61356530,61353784,61352985,61350991,61348805	61362268,61356728,61353992,61353139,61351147,61350422	Gene ID= ENSG00000162144.9 TPM= 7.72 Transcript Type= NA
chr11	61348745	61362299	61348745	61362299	-	ENST00000294072.8@CYB561A3	ENST00000294072.8	protein_coding	61361733,61357733,61356530,61353784,61352985,61350991,61348745	61362299,61357828,61356728,61353992,61353139,61351147,61350422	Gene ID= ENSG00000162144.9 TPM= 9.65 Transcript Type= protein_coding
chr11	61360512	61362317	61360512	61362317	-	transcript2554.chr11.nnic@NA	transcript2554.chr11.nnic	NA	61360512	61362317	Gene ID= novel_gene_chr11_2555 TPM= 21.24 Transcript Type= NA
chr11	61362001	61369509	61362001	61369509	+	ENST00000278826.10@TMEM138	ENST00000278826.10	protein_coding	61362001,61364252,61366045,61367923,61368597	61362420,61364518,61366216,61367998,61369509	Gene ID= ENSG00000149483.11 TPM= 19.31 Transcript Type= protein_coding
chr11	61392360	61398863	61392360	61398863	+	ENST00000334888.9@TMEM216	ENST00000334888.9	protein_coding	61392360,61393231,61393884,61397774,61398261	61392665,61393332,61393976,61397975,61398863	Gene ID= ENSG00000187049.9 TPM= 2.9 Transcript Type= protein_coding
chr11	61391687	61398851	61391687	61398851	+	ENST00000515837.6@TMEM216	ENST00000515837.6	protein_coding	61391687,61393231,61393884,61397774,61398270	61392665,61393332,61393976,61397975,61398851	Gene ID= ENSG00000187049.9 TPM= 2.9 Transcript Type= protein_coding
chr11	61402649	61430031	61402649	61430031	-	ENST00000394888.8@CPSF7	ENST00000394888.8	protein_coding	61429914,61429182,61421390,61420470,61419922,61416105,61415666,61411769,61410938,61402649	61430031,61429290,61421608,61420573,61420094,61416519,61415784,61411937,61411105,61404704	Gene ID= ENSG00000149532.15 TPM= 6.27 Transcript Type= protein_coding
chr11	61402731	61430014	61402731	61430014	-	ENST00000439958.7@CPSF7	ENST00000439958.7	protein_coding	61429914,61429182,61421390,61420470,61419949,61416105,61415666,61411769,61410938,61402731	61430014,61429290,61421608,61420573,61420094,61416519,61415784,61411937,61411105,61404704	Gene ID= ENSG00000149532.15 TPM= 6.27 Transcript Type= protein_coding
chr11	61430123	61473531	61430123	61473531	+	transcript2574.chr11.nnic@AP003108.2	transcript2574.chr11.nnic	protein_coding	61430123,61437625,61438004,61468664,61472745	61430182,61437848,61438113,61468714,61473531	Gene ID= ENSG00000256591.5 TPM= 8.69 Transcript Type= NA
chr11	61430049	61473538	61430049	61473538	+	transcript2579.chr11.nnic@AP003108.2	transcript2579.chr11.nnic	protein_coding	61430049,61437625,61438004,61472745	61430182,61437848,61438113,61473538	Gene ID= ENSG00000256591.5 TPM= 6.76 Transcript Type= NA
chr11	61430124	61446728	61430124	61446728	+	transcript2582.chr11.nnic@AP003108.2	transcript2582.chr11.nnic	protein_coding	61430124,61438004,61445941	61430182,61438113,61446728	Gene ID= ENSG00000256591.5 TPM= 5.79 Transcript Type= NA
chr11	61430105	61446697	61430105	61446697	+	ENST00000542074.1@SDHAF2	ENST00000542074.1	protein_coding	61430105,61445941	61430182,61446697	Gene ID= ENSG00000167985.6 TPM= 2.9 Transcript Type= protein_coding
chr11	61515313	61581148	61515313	61581148	-	ENST00000263846.8@SYT7	ENST00000263846.8	protein_coding	61580790,61556104,61551384,61532989,61527915,61524363,61523827,61523075,61515313	61581148,61556207,61551463,61533124,61528185,61524532,61523941,61523274,61518731	Gene ID= ENSG00000011347.9 TPM= 2.9 Transcript Type= protein_coding
chr11	61789131	61792802	61789131	61792802	-	ENST00000543510.1@TMEM258	ENST00000543510.1	protein_coding	61791463,61790493,61789785,61789131	61792802,61790602,61789921,61789235	Gene ID= ENSG00000134825.15 TPM= 5.79 Transcript Type= protein_coding
chr11	61789130	61792616	61789130	61792616	-	ENST00000535297.1@TMEM258	ENST00000535297.1	protein_coding	61792556,61790375,61789130	61792616,61790602,61789235	Gene ID= ENSG00000134825.15 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr11	61792637	61797244	61792637	61797244	+	ENST00000305885.2@FEN1	ENST00000305885.2	protein_coding	61792637,61795341	61793028,61797244	Gene ID= ENSG00000168496.3 TPM= 32.82 Transcript Type= protein_coding
chr11	61799625	61817162	61799625	61817162	-	ENST00000350997.11@FADS1	ENST00000350997.11	protein_coding	61816555,61813243,61812471,61810974,61810751,61806664,61804685,61803670,61803363,61803032,61802801,61799625	61817162,61813353,61812668,61811075,61810879,61806724,61804761,61803767,61803459,61803111,61802926,61802462	Gene ID= ENSG00000149485.18 TPM= 9.65 Transcript Type= protein_coding
chr11	61873526	61891639	61873526	61891639	-	transcript2620.chr11.nnic@FADS3	transcript2620.chr11.nnic	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61877411,61876359,61876111,61875851,61873526	61891639,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 15.9 Transcript Type= NA
chr11	61873526	61891639	61873526	61891639	-	transcript2623.chr11.nic@FADS3	transcript2623.chr11.nic	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61877511,61876359,61876111,61875851,61873526	61891639,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 28.45 Transcript Type= NA
chr11	61873526	61891639	61873526	61891639	-	transcript2625.chr11.nic@FADS3	transcript2625.chr11.nic	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61876359,61876111,61875851,61873526	61891639,61880151,61879509,61878847,61878634,61878215,61877587,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 9.53 Transcript Type= NA
chr11	61873526	61891534	61873526	61891534	-	ENST00000278829.6@FADS3	ENST00000278829.6	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61877511,61876866,61876359,61876111,61875851,61873526	61891534,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876455,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 73.01 Transcript Type= protein_coding
chr11	61897301	61917525	61897301	61917525	-	ENST00000394836.6@RAB3IL1	ENST00000394836.6	protein_coding	61917357,61908054,61907565,61907393,61906466,61904754,61904546,61902442,61899314,61897301	61917525,61908306,61907660,61907470,61906684,61904882,61904658,61902541,61899380,61898360	Gene ID= ENSG00000167994.11 TPM= 1.93 Transcript Type= protein_coding
chr11	61964566	61967631	61964566	61967631	-	ENST00000620041.4@FTH1	ENST00000620041.4	protein_coding	61967548,61967312,61965369,61964987,61964566	61967631,61967453,61965515,61965112,61964891	Gene ID= ENSG00000167996.15 TPM= 171.42 Transcript Type= protein_coding
chr11	61964566	61967633	61964566	61967633	-	ENST00000534180.1@FTH1	ENST00000534180.1	protein_coding	61967312,61965369,61964987,61964566	61967633,61965577,61965112,61964891	Gene ID= ENSG00000167996.15 TPM= 90.33 Transcript Type= nonsense_mediated_decay
chr11	61964566	61967631	61964566	61967631	-	ENST00000532829.5@FTH1	ENST00000532829.5	protein_coding	61967312,61965369,61964987,61964566	61967631,61965515,61965105,61964891	Gene ID= ENSG00000167996.15 TPM= 3338.29 Transcript Type= nonsense_mediated_decay
chr11	62337453	62393406	62337453	62393406	+	ENST00000301776.9@ASRGL1	ENST00000301776.9	protein_coding	62337453,62337967,62356325,62356987,62389133,62391522,62392079	62337574,62338167,62356467,62357144,62389251,62391632,62393406	Gene ID= ENSG00000162174.12 TPM= 1.45 Transcript Type= protein_coding
chr11	62337448	62393412	62337448	62393412	+	ENST00000415229.6@ASRGL1	ENST00000415229.6	protein_coding	62337448,62337890,62356325,62356987,62389133,62391522,62392079	62337574,62338167,62356467,62357144,62389251,62391632,62393412	Gene ID= ENSG00000162174.12 TPM= 1.45 Transcript Type= protein_coding
chr11	62433546	62546796	62433546	62546796	-	ENST00000257247.11@AHNAK	ENST00000257247.11	protein_coding	62546660,62536469,62535945,62535003,62491732,62433546	62546796,62536567,62536098,62535190,62491831,62433891	Gene ID= ENSG00000124942.13 TPM= 46.65 Transcript Type= protein_coding
chr11	62515905	62546835	62515905	62546835	-	ENST00000378024.8@AHNAK	ENST00000378024.8	protein_coding	62546660,62536469,62535945,62535003,62515905	62546835,62536567,62536098,62535190,62534074	Gene ID= ENSG00000124942.13 TPM= 365.85 Transcript Type= protein_coding
chr11	62559601	62573973	62559601	62573973	-	ENST00000329251.4@EEF1G	ENST00000329251.4	protein_coding	62573831,62572584,62571838,62571540,62570965,62567399,62566806,62560282,62560069,62559601	62573973,62572742,62571901,62571682,62571108,62567528,62567010,62560454,62560193,62559837	Gene ID= ENSG00000254772.9 TPM= 3456.37 Transcript Type= protein_coding
chr11	62593214	62601840	62593214	62601840	-	ENST00000278823.6@MTA2	ENST00000278823.6	protein_coding	62601423,62600622,62600166,62598522,62598327,62598024,62597610,62597316,62596637,62596458,62596279,62596010,62595752,62595264,62594981,62594516,62594259,62593214	62601840,62600689,62600259,62598639,62598390,62598141,62597712,62597415,62596825,62596532,62596337,62596107,62595891,62595492,62595070,62594634,62594407,62594040	Gene ID= ENSG00000149480.6 TPM= 11.58 Transcript Type= protein_coding
chr11	62602218	62612765	62602218	62612765	-	ENST00000394773.6@EML3	ENST00000394773.6	protein_coding	62612436,62611425,62611087,62610879,62609629,62609354,62608962,62608736,62608542,62608201,62607666,62606958,62606063,62605855,62605642,62605113,62604113,62603944,62603729,62603149,62602759,62602218	62612765,62611596,62611344,62610992,62609696,62609477,62609132,62608805,62608652,62608296,62607821,62607099,62606214,62605980,62605773,62605180,62604201,62604041,62603816,62603247,62602889,62602678	Gene ID= ENSG00000149499.11 TPM= 20.27 Transcript Type= protein_coding
chr11	62615296	62622175	62615296	62622175	-	ENST00000265471.9@B3GAT3	ENST00000265471.9	protein_coding	62621866,62620497,62616987,62616506,62615296	62622175,62620671,62617347,62616796,62615799	Gene ID= ENSG00000149541.9 TPM= 17.38 Transcript Type= protein_coding
chr11	62646848	62653306	62646848	62653306	-	transcript2710.chr11.nnic@INTS5	transcript2710.chr11.nnic	protein_coding	62653170,62648898,62646848	62653306,62649999,62648656	Gene ID= ENSG00000185085.2 TPM= 4.18 Transcript Type= NA
chr11	62646856	62653306	62646856	62653306	-	transcript2712.chr11.nnic@INTS5	transcript2712.chr11.nnic	protein_coding	62653170,62648907,62646856	62653306,62649999,62648801	Gene ID= ENSG00000185085.2 TPM= 4.18 Transcript Type= NA
chr11	62646848	62653302	62646848	62653302	-	ENST00000330574.2@INTS5	ENST00000330574.2	protein_coding	62653170,62646848	62653302,62649999	Gene ID= ENSG00000185085.2 TPM= 49.55 Transcript Type= protein_coding
chr11	62662816	62665217	62662816	62665217	-	ENST00000524958.5@C11orf98	ENST00000524958.5	protein_coding	62665131,62664849,62663236,62662816	62665217,62664973,62663333,62663159	Gene ID= ENSG00000278615.4 TPM= 54.06 Transcript Type= protein_coding
chr11	62662817	62671769	62662817	62671769	-	ENST00000354588.7@LBHD1	ENST00000354588.7	protein_coding	62671564,62669882,62669641,62667523,62664849,62663236,62662817	62671769,62670041,62669803,62667747,62664973,62663333,62663159	Gene ID= ENSG00000162194.12 TPM= 2.9 Transcript Type= protein_coding
chr11	62665309	62668108	62665309	62668108	+	ENST00000532971.1@METTL12	ENST00000532971.1	protein_coding	62665309,62665647,62666396	62665332,62665946,62668108	Gene ID= ENSG00000214756.7 TPM= 2.9 Transcript Type= protein_coding
chr11	62665313	62668496	62665313	62668496	+	ENST00000529868.1@METTL12	ENST00000529868.1	protein_coding	62665313,62665647	62665332,62668496	Gene ID= ENSG00000214756.7 TPM= 2.9 Transcript Type= retained_intron
chr11	62665336	62665711	62665336	62665711	+	ENST00000594728.1@METTL12	ENST00000594728.1	protein_coding	62665336	62665711	Gene ID= ENSG00000214756.7 TPM= 2.9 Transcript Type= processed_transcript
chr11	62670273	62673577	62670273	62673577	+	ENST00000531323.1@UQCC3	ENST00000531323.1	protein_coding	62670273,62671284,62671953	62670353,62671865,62673577	Gene ID= ENSG00000204922.4 TPM= 17.38 Transcript Type= protein_coding
chr11	62676498	62679090	62676498	62679090	-	ENST00000301935.9@UBXN1	ENST00000301935.9	protein_coding	62678865,62678690,62678495,62678339,62677927,62677781,62677518,62676813,62676498	62679090,62678743,62678601,62678408,62678118,62677832,62677634,62677005,62676639	Gene ID= ENSG00000162191.13 TPM= 491.83 Transcript Type= protein_coding
chr11	62676517	62679067	62676517	62679067	-	ENST00000525717.5@UBXN1	ENST00000525717.5	protein_coding	62678865,62678690,62678495,62678339,62677927,62677518,62676813,62676517	62679067,62678743,62678601,62678408,62678118,62677832,62677005,62676639	Gene ID= ENSG00000162191.13 TPM= 1.93 Transcript Type= retained_intron
chr11	62676498	62679055	62676498	62679055	-	ENST00000294119.6@UBXN1	ENST00000294119.6	protein_coding	62678865,62678690,62678495,62678339,62677927,62677781,62677518,62676498	62679055,62678743,62678601,62678408,62678118,62677832,62677634,62677005	Gene ID= ENSG00000162191.13 TPM= 4.34 Transcript Type= protein_coding
chr11	62690295	62706344	62690295	62706344	-	ENST00000407022.7@BSCL2	ENST00000407022.7	protein_coding	62706203,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690295	62706344,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690867,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 33.79 Transcript Type= protein_coding
chr11	62690315	62706344	62690315	62706344	-	ENST00000421906.5@BSCL2	ENST00000421906.5	protein_coding	62706259,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690315	62706344,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690867,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 10.62 Transcript Type= protein_coding
chr11	62690275	62709514	62690275	62709514	-	ENST00000405837.5@BSCL2	ENST00000405837.5	protein_coding	62709147,62707109,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690275	62709514,62707324,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690873,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 7.72 Transcript Type= protein_coding
chr11	62714752	62727447	62714752	62727447	-	transcript2743.chr11.nnic@HNRNPUL2-BSCL2	transcript2743.chr11.nnic	protein_coding	62726619,62724291,62723914,62723587,62722813,62722601,62722117,62721820,62721295,62720023,62716989,62715864,62715579,62714752	62727447,62724426,62723990,62723726,62722903,62722713,62722380,62721942,62721423,62720191,62717189,62715937,62715607,62714815	Gene ID= ENSG00000234857.2 TPM= 2.73 Transcript Type= NA
chr11	62714752	62727447	62714752	62727447	-	transcript2755.chr11.nnic@HNRNPUL2-BSCL2	transcript2755.chr11.nnic	protein_coding	62726619,62724291,62723914,62723587,62722813,62722601,62722117,62721820,62721295,62720069,62714752	62727447,62724426,62723990,62723726,62722903,62722713,62722380,62721942,62721423,62720191,62714817	Gene ID= ENSG00000234857.2 TPM= 3.7 Transcript Type= NA
chr11	62712755	62714146	62712755	62714146	-	transcript2763.chr11.nnic@NA	transcript2763.chr11.nnic	NA	62712755	62714146	Gene ID= novel_gene_chr11_2764 TPM= 1.93 Transcript Type= NA
chr11	62728539	62738636	62728539	62738636	+	ENST00000316461.8@TTC9C	ENST00000316461.8	protein_coding	62728539,62735382,62738288	62729086,62735564,62738636	Gene ID= ENSG00000162222.13 TPM= 8.69 Transcript Type= protein_coding
chr11	62750963	62754188	62750963	62754188	-	ENST00000394807.3@ZBTB3	ENST00000394807.3	protein_coding	62753964,62750963	62754188,62753715	Gene ID= ENSG00000185670.7 TPM= 2.9 Transcript Type= protein_coding
chr11	62761617	62766710	62761617	62766710	+	ENST00000531944.5@POLR2G	ENST00000531944.5	protein_coding	62761617,62761795,62765182,62765340,62765653,62766243,62766494	62761660,62762866,62765232,62765405,62765724,62766276,62766710	Gene ID= ENSG00000168002.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr11	62761544	62766710	62761544	62766710	+	ENST00000301788.11@POLR2G	ENST00000301788.11	protein_coding	62761544,62761795,62762867,62765182,62765340,62765653,62766243,62766494	62761660,62761904,62763026,62765232,62765405,62765724,62766276,62766710	Gene ID= ENSG00000168002.11 TPM= 18.34 Transcript Type= protein_coding
chr11	62761580	62766673	62761580	62766673	+	ENST00000525455.5@POLR2G	ENST00000525455.5	protein_coding	62761580,62761795,62762542,62765182,62765340,62765653,62766243,62766494	62761660,62761904,62762866,62765232,62765405,62765724,62766276,62766673	Gene ID= ENSG00000168002.11 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr11	62771303	62787342	62771303	62787342	+	ENST00000294168.7@TAF6L	ENST00000294168.7	protein_coding	62771303,62775771,62776384,62777978,62778285,62778869,62781894,62782113,62782693,62786260,62786517	62771490,62775930,62776470,62778128,62778335,62778963,62781968,62782333,62782825,62786388,62787342	Gene ID= ENSG00000162227.7 TPM= 64.68 Transcript Type= protein_coding
chr11	62789971	62792021	62789971	62792021	-	ENST00000307366.7@TMEM223	ENST00000307366.7	protein_coding	62791679,62789971	62792021,62790915	Gene ID= ENSG00000168569.7 TPM= 16.41 Transcript Type= protein_coding
chr11	62787427	62790405	62787427	62790405	+	ENST00000333449.8@TMEM179B	ENST00000333449.8	protein_coding	62787427,62789023,62789292,62789601,62789886	62787527,62789210,62789426,62789679,62790405	Gene ID= ENSG00000185475.10 TPM= 4.83 Transcript Type= protein_coding
chr11	62792171	62806302	62792171	62806302	-	ENST00000532297.5@NXF1	ENST00000532297.5	protein_coding	62806191,62805329,62803792,62803419,62802177,62801942,62801739,62801562,62801329,62801094,62800377,62798539,62797318,62797183,62796460,62796287,62796066,62795901,62794935,62794258,62792641,62792171	62806302,62805874,62803978,62803572,62802260,62802046,62801819,62801631,62801417,62801201,62800486,62798575,62797386,62797238,62796567,62796345,62796181,62795943,62795007,62794440,62792701,62792514	Gene ID= ENSG00000162231.13 TPM= 9.65 Transcript Type= protein_coding
chr11	62792171	62799679	62792171	62799679	-	transcript2782.chr11.nnic@NXF1	transcript2782.chr11.nnic	protein_coding	62798891,62798539,62797318,62797183,62796460,62796287,62796066,62795901,62794935,62794258,62792641,62792171	62799679,62798575,62797386,62797238,62796567,62796345,62796181,62795943,62795007,62794440,62792701,62792514	Gene ID= ENSG00000162231.13 TPM= 5.79 Transcript Type= NA
chr11	62806897	62832088	62806897	62832088	-	ENST00000294179.7@STX5	ENST00000294179.7	protein_coding	62831954,62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806897	62832088,62831262,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628	Gene ID= ENSG00000162236.11 TPM= 26.06 Transcript Type= protein_coding
chr11	62806925	62832042	62806925	62832042	-	ENST00000394690.5@STX5	ENST00000394690.5	protein_coding	62831954,62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806925	62832042,62831110,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628	Gene ID= ENSG00000162236.11 TPM= 1.93 Transcript Type= protein_coding
chr11	62832912	62839573	62832912	62839573	-	transcript2813.chr11.nic@WDR74	transcript2813.chr11.nic	protein_coding	62839507,62839322,62839114,62835961,62835695,62834427,62834276,62833792,62833618,62832912	62839573,62839428,62839235,62836036,62835841,62835532,62834331,62833937,62833674,62833131	Gene ID= ENSG00000133316.15 TPM= 4.34 Transcript Type= NA
chr11	62851989	62855886	62851989	62855886	-	transcript2818.chr11.nic@SNHG1	transcript2818.chr11.nic	processed_transcript	62855865,62855424,62855133,62854888,62854519,62854018,62853801,62853552,62853075,62852811,62851989	62855886,62855466,62855216,62854938,62854551,62854064,62853833,62853590,62853115,62852839,62852681	Gene ID= ENSG00000255717.6 TPM= 4.34 Transcript Type= NA
chr11	62851991	62855460	62851991	62855460	-	ENST00000537869.5@SNHG1	ENST00000537869.5	processed_transcript	62855424,62855133,62854888,62854519,62853801,62853552,62853075,62852811,62851991	62855460,62855216,62854938,62854551,62853833,62853590,62853115,62852839,62852681	Gene ID= ENSG00000255717.6 TPM= 1.45 Transcript Type= lincRNA
chr11	62856168	62888875	62856168	62888875	+	ENST00000535296.5@SLC3A2	ENST00000535296.5	protein_coding	62856168,62871577,62881019,62881893,62882908,62884457,62884632,62885177,62885465,62888135,62888331	62856381,62871669,62881447,62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888875	Gene ID= ENSG00000168003.16 TPM= 14.64 Transcript Type= protein_coding
chr11	62880872	62888855	62880872	62888855	+	ENST00000338663.11@SLC3A2	ENST00000338663.11	protein_coding	62880872,62881893,62882908,62884457,62884632,62885177,62885465,62888135,62888331	62881447,62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888855	Gene ID= ENSG00000168003.16 TPM= 238.11 Transcript Type= protein_coding
chr11	62881725	62888845	62881725	62888845	+	ENST00000536981.5@SLC3A2	ENST00000536981.5	protein_coding	62881725,62882908,62884457,62884632,62885177,62885465,62888135,62888331	62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888845	Gene ID= ENSG00000168003.16 TPM= 1.93 Transcript Type= protein_coding
chr11	63536821	63546462	63536821	63546462	+	ENST00000255688.7@RARRES3	ENST00000255688.7	protein_coding	63536821,63539516,63544621,63546149	63536877,63539624,63544889,63546462	Gene ID= ENSG00000133321.10 TPM= 4.83 Transcript Type= protein_coding
chr11	63569742	63569932	63569742	63569932	-	transcript2857.chr11.nnic@NA	transcript2857.chr11.nnic	NA	63569742	63569932	Gene ID= novel_gene_chr11_2858 TPM= 3.86 Transcript Type= NA
chr11	63571988	63573642	63571988	63573642	+	transcript2853.chr11.nnic@NA	transcript2853.chr11.nnic	NA	63571988	63573642	Gene ID= novel_gene_chr11_2854 TPM= 4.83 Transcript Type= NA
chr11	63681483	63759885	63681483	63759885	+	ENST00000377819.9@RTN3	ENST00000377819.9	protein_coding	63681483,63704851,63718702,63749991,63752507,63753069,63753662,63756112,63758156	63681778,63704907,63721032,63750198,63752645,63753138,63753708,63756170,63759885	Gene ID= ENSG00000133318.13 TPM= 1.93 Transcript Type= protein_coding
chr11	63681450	63759891	63681450	63759891	+	ENST00000356000.7@RTN3	ENST00000356000.7	protein_coding	63681450,63704851,63749991,63752507,63753069,63753662,63756112,63758156	63681778,63704907,63750198,63752645,63753138,63753708,63756170,63759891	Gene ID= ENSG00000133318.13 TPM= 22.68 Transcript Type= protein_coding
chr11	63681500	63759885	63681500	63759885	+	ENST00000537981.5@RTN3	ENST00000537981.5	protein_coding	63681500,63749991,63752507,63753069,63753662,63756112,63758156	63681778,63750198,63752645,63753138,63753708,63756170,63759885	Gene ID= ENSG00000133318.13 TPM= 41.03 Transcript Type= protein_coding
chr11	63759898	63768814	63759898	63768814	-	transcript2877.chr11.nic@C11orf95	transcript2877.chr11.nic	protein_coding	63768484,63765807,63759898	63768814,63766304,63763869	Gene ID= ENSG00000188070.9 TPM= 10.62 Transcript Type= NA
chr11	63813388	63827718	63813388	63827718	+	ENST00000294244.8@C11orf84	ENST00000294244.8	protein_coding	63813388,63817805,63818216,63818527,63818802,63826928	63813813,63818134,63818365,63818652,63819002,63827718	Gene ID= ENSG00000168005.8 TPM= 2.9 Transcript Type= protein_coding
chr11	63838928	63911019	63838928	63911019	+	ENST00000402010.6@MARK2	ENST00000402010.6	protein_coding	63838928,63895159,63895580,63898232,63898608,63898763,63899052,63899874,63900559,63900780,63900957,63902198,63902601,63903061,63903986,63904786,63906088,63908260,63908877	63839560,63895338,63895633,63898280,63898673,63898833,63899108,63900110,63900678,63900879,63901069,63902330,63902782,63903158,63904147,63905043,63906114,63908304,63911019	Gene ID= ENSG00000072518.20 TPM= 8.37 Transcript Type= protein_coding
chr11	63839094	63909591	63839094	63909591	+	transcript2885.chr11.nic@MARK2	transcript2885.chr11.nic	protein_coding	63839094,63895159,63895580,63898232,63898608,63898763,63899052,63899874,63900559,63900780,63900957,63902198,63902604,63903061,63904786,63906088,63908260,63908877	63839560,63895338,63895633,63898280,63898673,63898833,63899108,63900110,63900678,63900879,63901069,63902330,63902782,63903158,63905043,63906114,63908304,63909591	Gene ID= ENSG00000072518.20 TPM= 10.78 Transcript Type= NA
chr11	63839005	63909579	63839005	63909579	+	ENST00000361128.9@MARK2	ENST00000361128.9	protein_coding	63839005,63895159,63895580,63898232,63898608,63898763,63899052,63899874,63900559,63900780,63900957,63902198,63902601,63903061,63904786,63906088,63908877	63839560,63895338,63895633,63898280,63898673,63898833,63899108,63900110,63900678,63900879,63901069,63902330,63902782,63903158,63905043,63906114,63909579	Gene ID= ENSG00000072518.20 TPM= 3.06 Transcript Type= protein_coding
chr11	63938959	63957319	63938959	63957319	+	ENST00000338447.10@NAA40	ENST00000338447.10	protein_coding	63938959,63945840,63952238,63952407,63952756,63953972,63954338	63939102,63947003,63952333,63952565,63952839,63954049,63957319	Gene ID= ENSG00000110583.12 TPM= 1.45 Transcript Type= retained_intron
chr11	63938996	63957328	63938996	63957328	+	ENST00000377793.8@NAA40	ENST00000377793.8	protein_coding	63938996,63945840,63946951,63952238,63952407,63952756,63953972,63954338	63939102,63945935,63947003,63952333,63952565,63952839,63954049,63957328	Gene ID= ENSG00000110583.12 TPM= 5.31 Transcript Type= protein_coding
chr11	63974607	63976543	63974607	63976543	+	ENST00000314133.3@COX8A	ENST00000314133.3	protein_coding	63974607,63976225	63974794,63976543	Gene ID= ENSG00000176340.3 TPM= 489.41 Transcript Type= protein_coding
chr11	63986413	63998415	63986413	63998415	+	ENST00000538426.5@OTUB1	ENST00000538426.5	protein_coding	63986413,63988337,63988654,63996530,63996857,63997050,63997349	63986514,63988398,63988752,63996648,63996941,63997244,63998415	Gene ID= ENSG00000167770.11 TPM= 41.51 Transcript Type= protein_coding
chr11	63985853	63998411	63985853	63998411	+	ENST00000301453.7@OTUB1	ENST00000301453.7	protein_coding	63985853,63988337,63988654,63996530,63997050,63997349	63986514,63988398,63988752,63996941,63997244,63998411	Gene ID= ENSG00000167770.11 TPM= 23.17 Transcript Type= retained_intron
chr11	63986449	63989029	63986449	63989029	+	transcript2910.chr11.nnic@NA	transcript2910.chr11.nnic	NA	63986449	63989029	Gene ID= novel_gene_chr11_2911 TPM= 1.93 Transcript Type= NA
chr11	63998975	64007073	63998975	64007073	+	transcript2937.chr11.nnic@OTUB1	transcript2937.chr11.nnic	protein_coding	63998975,64006263	64001520,64007073	Gene ID= ENSG00000167770.11 TPM= 1.93 Transcript Type= NA
chr11	63998558	64166061	63998558	64166061	-	ENST00000255681.6@MACROD1	ENST00000255681.6	protein_coding	64165697,64152292,64151239,64015252,64000227,63999642,63999530,63999331,63998955,63998838,63998558	64166061,64152393,64151355,64015281,64000343,63999763,63999560,63999404,63999036,63998872,63998687	Gene ID= ENSG00000133315.10 TPM= 303.69 Transcript Type= protein_coding
chr11	64148747	64166057	64148747	64166057	-	ENST00000538595.1@MACROD1	ENST00000538595.1	protein_coding	64165697,64152292,64151239,64148747	64166057,64152393,64151355,64149034	Gene ID= ENSG00000133315.10 TPM= 1.06 Transcript Type= processed_transcript
chr11	64184890	64185719	64184890	64185719	-	transcript2939.chr11.nnic@NA	transcript2939.chr11.nnic	NA	64184890	64185719	Gene ID= novel_gene_chr11_2940 TPM= 1.93 Transcript Type= NA
chr11	64186182	64204538	64186182	64204538	+	transcript2943.chr11.nic@STIP1	transcript2943.chr11.nic	protein_coding	64186182,64193078,64194189,64194479,64195645,64197271,64197493,64197854,64199940,64200169,64202876,64203125,64203450	64186270,64193287,64194330,64194620,64195813,64197397,64197595,64197974,64200036,64200293,64202912,64203228,64204538	Gene ID= ENSG00000168439.16 TPM= 18.34 Transcript Type= NA
chr11	64186115	64204543	64186115	64204543	+	ENST00000305218.8@STIP1	ENST00000305218.8	protein_coding	64186115,64193078,64194189,64194479,64195645,64197271,64197493,64197854,64199940,64200169,64202876,64203125,64203450,64204054	64186270,64193287,64194330,64194620,64195813,64197397,64197595,64197974,64200036,64200293,64202912,64203228,64203622,64204543	Gene ID= ENSG00000168439.16 TPM= 285.73 Transcript Type= protein_coding
chr11	64206734	64223886	64206734	64223886	+	ENST00000345728.9@FERMT3	ENST00000345728.9	protein_coding	64206734,64207351,64210611,64211052,64211275,64211645,64219251,64219524,64219740,64219891,64220220,64220436,64221016,64223048,64223313	64206814,64207524,64210844,64211171,64211443,64211747,64219358,64219658,64219789,64220015,64220326,64220669,64221140,64223189,64223886	Gene ID= ENSG00000149781.12 TPM= 1.93 Transcript Type= protein_coding
chr11	64223800	64226254	64223800	64226254	-	ENST00000394546.6@TRPT1	ENST00000394546.6	protein_coding	64226050,64225786,64225499,64224795,64224543,64224285,64224100,64223800	64226254,64225869,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 54.06 Transcript Type= protein_coding
chr11	64223799	64226227	64223799	64226227	-	transcript2952.chr11.nnic@TRPT1	transcript2952.chr11.nnic	protein_coding	64226098,64225786,64225499,64224801,64224543,64224285,64224100,64223799	64226227,64225869,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 4.44 Transcript Type= NA
chr11	64223845	64226209	64223845	64226209	-	ENST00000317459.10@TRPT1	ENST00000317459.10	protein_coding	64226050,64225786,64225499,64224801,64224543,64224285,64224100,64223845	64226209,64225869,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 16.41 Transcript Type= protein_coding
chr11	64223799	64226150	64223799	64226150	-	ENST00000394547.7@TRPT1	ENST00000394547.7	protein_coding	64226050,64225499,64224801,64224543,64224285,64224100,64223799	64226150,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 15.06 Transcript Type= protein_coding
chr11	64223844	64226180	64223844	64226180	-	transcript2981.chr11.nnic@NA	transcript2981.chr11.nnic	NA	64223844	64226180	Gene ID= novel_gene_chr11_2982 TPM= 2.9 Transcript Type= NA
chr11	64226274	64234281	64226274	64234281	+	transcript2988.chr11.nic@NUDT22	transcript2988.chr11.nic	protein_coding	64226274,64226635,64227568,64229247,64229478,64229850,64232430,64232704,64233894,64234073	64226427,64227132,64227666,64229344,64229571,64231964,64232614,64232865,64233980,64234281	Gene ID= ENSG00000149761.8 TPM= 7.72 Transcript Type= NA
chr11	64226268	64230016	64226268	64230016	+	transcript3001.chr11.nic@NUDT22	transcript3001.chr11.nic	protein_coding	64226268,64226635,64227568,64229247,64229478,64229850	64226297,64227132,64227666,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 4.05 Transcript Type= NA
chr11	64226278	64230016	64226278	64230016	+	transcript3006.chr11.nic@NUDT22	transcript3006.chr11.nic	protein_coding	64226278,64227568,64229247,64229478,64229850	64227132,64227666,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 13.71 Transcript Type= NA
chr11	64226278	64230016	64226278	64230016	+	transcript3009.chr11.nnic@NUDT22	transcript3009.chr11.nnic	protein_coding	64226278,64227568,64229478,64229850	64227132,64227666,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 4.05 Transcript Type= NA
chr11	64226290	64230016	64226290	64230016	+	ENST00000279206.7@NUDT22	ENST00000279206.7	protein_coding	64226290,64226635,64227568,64229247,64229478,64229850	64226427,64227132,64227666,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 29.15 Transcript Type= protein_coding
chr11	64230758	64234281	64230758	64234281	+	ENST00000321460.5@DNAJC4	ENST00000321460.5	protein_coding	64230758,64231871,64232430,64232701,64233894	64230940,64231964,64232614,64232865,64234281	Gene ID= ENSG00000110011.13 TPM= 6.76 Transcript Type= protein_coding
chr11	64234559	64238787	64234559	64238787	+	transcript2996.chr11.nnic@VEGFB	transcript2996.chr11.nnic	protein_coding	64234559,64235458,64235911,64236254,64237187,64237521,64238356	64234893,64235500,64236009,64236327,64237222,64237655,64238787	Gene ID= ENSG00000173511.9 TPM= 6.76 Transcript Type= NA
chr11	64234538	64238793	64234538	64238793	+	ENST00000309422.6@VEGFB	ENST00000309422.6	protein_coding	64234538,64235458,64235813,64236254,64237187,64237420,64238356	64234893,64235500,64236009,64236327,64237222,64237655,64238793	Gene ID= ENSG00000173511.9 TPM= 36.68 Transcript Type= protein_coding
chr11	64234820	64238775	64234820	64238775	+	ENST00000426086.2@VEGFB	ENST00000426086.2	protein_coding	64234820,64235458,64235813,64236254,64237187,64237521,64238356	64234893,64235500,64236009,64236327,64237222,64237655,64238775	Gene ID= ENSG00000173511.9 TPM= 9.65 Transcript Type= protein_coding
chr11	64241156	64244126	64241156	64244126	+	ENST00000449942.6@FKBP2	ENST00000449942.6	protein_coding	64241156,64242384,64243199,64243451,64243841,64243968	64241238,64242558,64243311,64243497,64243876,64244126	Gene ID= ENSG00000173486.12 TPM= 6.76 Transcript Type= protein_coding
chr11	64241004	64244124	64241004	64244124	+	ENST00000309366.8@FKBP2	ENST00000309366.8	protein_coding	64241004,64242384,64243199,64243451,64243841,64243968	64241132,64242558,64243311,64243497,64243876,64244124	Gene ID= ENSG00000173486.12 TPM= 24.13 Transcript Type= protein_coding
chr11	64244484	64246941	64244484	64246941	-	ENST00000309318.7@PPP1R14B	ENST00000309318.7	protein_coding	64246416,64245204,64244930,64244484	64246941,64245287,64244962,64244822	Gene ID= ENSG00000173457.10 TPM= 104.74 Transcript Type= protein_coding
chr11	64244549	64245816	64244549	64245816	-	ENST00000542235.1@PPP1R14B	ENST00000542235.1	protein_coding	64245204,64244930,64244549	64245816,64244962,64244822	Gene ID= ENSG00000173457.10 TPM= 7.24 Transcript Type= protein_coding
chr11	64269834	64284669	64269834	64284669	-	ENST00000309032.7@BAD	ENST00000309032.7	protein_coding	64284631,64284182,64271613,64269834	64284669,64284376,64271803,64270337	Gene ID= ENSG00000002330.13 TPM= 71.43 Transcript Type= protein_coding
chr11	64284800	64289494	64284800	64289494	+	transcript3029.chr11.nic@GPR137	transcript3029.chr11.nic	protein_coding	64284800,64286510,64286965,64287721,64288065,64288340,64288603,64289037	64285380,64286881,64287014,64287946,64288214,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 4.83 Transcript Type= NA
chr11	64284857	64289494	64284857	64289494	+	transcript3036.chr11.nic@GPR137	transcript3036.chr11.nic	protein_coding	64284857,64286965,64288603,64289037	64286881,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 2.9 Transcript Type= NA
chr11	64305578	64316738	64305578	64316738	+	ENST00000000442.10@ESRRA	ENST00000000442.10	protein_coding	64305578,64307168,64313951,64314239,64314741,64315001,64315707	64305736,64307504,64314067,64314367,64314911,64315270,64316738	Gene ID= ENSG00000173153.13 TPM= 220.94 Transcript Type= protein_coding
chr11	64311984	64313847	64311984	64313847	-	transcript3070.chr11.nnic@NA	transcript3070.chr11.nnic	NA	64311984	64313847	Gene ID= novel_gene_chr11_3071 TPM= 6.76 Transcript Type= NA
chr11	64316691	64318084	64316691	64318084	-	ENST00000544844.5@TRMT112	ENST00000544844.5	protein_coding	64317449,64317264,64317058,64316691	64318084,64317365,64317147,64316968	Gene ID= ENSG00000173113.6 TPM= 85.91 Transcript Type= protein_coding
chr11	64316696	64317553	64316696	64317553	-	ENST00000539854.1@TRMT112	ENST00000539854.1	protein_coding	64317449,64317264,64316696	64317553,64317365,64317147	Gene ID= ENSG00000173113.6 TPM= 1.61 Transcript Type= protein_coding
chr11	64316695	64317558	64316695	64317558	-	ENST00000308774.6@TRMT112	ENST00000308774.6	protein_coding	64317449,64317264,64317058,64316695	64317558,64317365,64317132,64316968	Gene ID= ENSG00000173113.6 TPM= 2.58 Transcript Type= protein_coding
chr11	64316691	64317510	64316691	64317510	-	ENST00000535126.1@TRMT112	ENST00000535126.1	protein_coding	64317264,64316691	64317510,64317147	Gene ID= ENSG00000173113.6 TPM= 1.61 Transcript Type= protein_coding
chr11	64318088	64321811	64318088	64321811	+	ENST00000265462.8@PRDX5	ENST00000265462.8	protein_coding	64318088,64319734,64320661,64320865,64321007,64321586	64318386,64319868,64320792,64320903,64321068,64321811	Gene ID= ENSG00000126432.13 TPM= 192.58 Transcript Type= protein_coding
chr11	64318161	64321811	64318161	64321811	+	transcript3062.chr11.nnic@PRDX5	transcript3062.chr11.nnic	protein_coding	64318161,64320661,64320865,64321007,64321586	64318386,64320792,64320903,64321068,64321811	Gene ID= ENSG00000126432.13 TPM= 10.14 Transcript Type= NA
chr11	64340223	64357534	64340223	64357534	+	ENST00000356786.9@CCDC88B	ENST00000356786.9	protein_coding	64340223,64340607,64340907,64341109,64341270,64341421,64341599,64341994,64342294,64342522,64343179,64343507,64343778,64343997,64349331,64349551,64351160,64351476,64352130,64352744,64353054,64353351,64353715,64354004,64355194,64355560,64357039	64340326,64340752,64341018,64341178,64341328,64341504,64341742,64342139,64342375,64342680,64343325,64343615,64343914,64345157,64349458,64349668,64351255,64351616,64352386,64352887,64353240,64353496,64353813,64354170,64355400,64355628,64357534	Gene ID= ENSG00000168071.21 TPM= 3.86 Transcript Type= protein_coding
chr11	64355343	64357531	64355343	64357531	+	ENST00000472524.1@CCDC88B	ENST00000472524.1	protein_coding	64355343,64357039	64355628,64357531	Gene ID= ENSG00000168071.21 TPM= 2.9 Transcript Type= processed_transcript
chr11	64359171	64372215	64359171	64372215	+	ENST00000334205.8@RPS6KA4	ENST00000334205.8	protein_coding	64359171,64359378,64360163,64360477,64361134,64361469,64361642,64361852,64365301,64368132,64368468,64368704,64369446,64369699,64370225,64370563,64371283	64359290,64359449,64360381,64360592,64361241,64361549,64361745,64362002,64365465,64368260,64368601,64368797,64369619,64369893,64370384,64370726,64372215	Gene ID= ENSG00000162302.12 TPM= 15.44 Transcript Type= protein_coding
chr11	64726911	64744178	64726911	64744178	-	ENST00000394432.7@RASGRP2	ENST00000394432.7	protein_coding	64744003,64742794,64742010,64741439,64740948,64740013,64739636,64739360,64736753,64735903,64735542,64735112,64730053,64729762,64728863,64727296,64726911	64744178,64742937,64742112,64741501,64741079,64740163,64739809,64739476,64737034,64735980,64735664,64735227,64730194,64729798,64729042,64727360,64727131	Gene ID= ENSG00000068831.18 TPM= 2.9 Transcript Type= protein_coding
chr11	64740866	64744859	64740866	64744859	-	ENST00000377487.5@RASGRP2	ENST00000377487.5	protein_coding	64744742,64742794,64742010,64741439,64740866	64744859,64742937,64742112,64741501,64741079	Gene ID= ENSG00000068831.18 TPM= 1.93 Transcript Type= protein_coding
chr11	64746389	64760297	64746389	64760297	-	ENST00000164139.3@PYGM	ENST00000164139.3	protein_coding	64759656,64758603,64758437,64758246,64757779,64755447,64755273,64754693,64754253,64753879,64753519,64753073,64752403,64751924,64751597,64751325,64750376,64747224,64746921,64746389	64760297,64758704,64758515,64758349,64757910,64755558,64755355,64754836,64754345,64754025,64753682,64753187,64752504,64752071,64751655,64751466,64750583,64747358,64746987,64746808	Gene ID= ENSG00000068976.13 TPM= 1429.14 Transcript Type= protein_coding
chr11	64764606	64778524	64764606	64778524	-	transcript3101.chr11.nic@SF1	transcript3101.chr11.nic	protein_coding	64778362,64777987,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64764606	64778524,64778146,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64766155	Gene ID= ENSG00000168066.20 TPM= 3.46 Transcript Type= NA
chr11	64764606	64778531	64764606	64778531	-	transcript3107.chr11.nnic@SF1	transcript3107.chr11.nnic	protein_coding	64778362,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64764606	64778531,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767823,64767251,64767079,64765518	Gene ID= ENSG00000168066.20 TPM= 14.72 Transcript Type= NA
chr11	64764606	64778786	64764606	64778786	-	ENST00000334944.9@SF1	ENST00000334944.9	protein_coding	64778362,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64765951,64764606	64778786,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64766155,64765518	Gene ID= ENSG00000168066.20 TPM= 4.42 Transcript Type= protein_coding
chr11	64764606	64778730	64764606	64778730	-	ENST00000377390.7@SF1	ENST00000377390.7	protein_coding	64778362,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64764606	64778730,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64766155	Gene ID= ENSG00000168066.20 TPM= 19.87 Transcript Type= protein_coding
chr11	64784914	64803241	64784914	64803241	-	ENST00000294066.6@MAP4K2	ENST00000294066.6	protein_coding	64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790394,64790188,64789889,64789730,64784914	64803241,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790462,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 2.9 Transcript Type= protein_coding
chr11	64789137	64803214	64789137	64803214	-	transcript3117.chr11.nnic@MAP4K2	transcript3117.chr11.nnic	protein_coding	64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790188,64789889,64789730,64789137	64803214,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 2.9 Transcript Type= NA
chr11	64803516	64810741	64803516	64810741	-	ENST00000315422.8@MEN1	ENST00000315422.8	protein_coding	64810268,64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803516	64810741,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816	Gene ID= ENSG00000133895.14 TPM= 6.44 Transcript Type= protein_coding
chr11	64803516	64810564	64803516	64810564	-	transcript3120.chr11.nic@MEN1	transcript3120.chr11.nic	protein_coding	64810514,64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803516	64810564,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816	Gene ID= ENSG00000133895.14 TPM= 7.4 Transcript Type= NA
chr11	64803516	64810608	64803516	64810608	-	ENST00000377326.7@MEN1	ENST00000377326.7	protein_coding	64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803516	64810608,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816	Gene ID= ENSG00000133895.14 TPM= 3.54 Transcript Type= protein_coding
chr11	64851642	64878719	64851642	64878719	-	ENST00000320631.7@EHD1	ENST00000320631.7	protein_coding	64878061,64874421,64859924,64855322,64851642	64878719,64874518,64860336,64855486,64854857	Gene ID= ENSG00000110047.17 TPM= 16.41 Transcript Type= protein_coding
chr11	64924671	64934473	64924671	64934473	+	ENST00000164133.6@PPP2R5B	ENST00000164133.6	protein_coding	64924671,64925471,64926712,64927802,64928066,64928295,64930322,64930481,64931436,64931559,64931749,64932765,64933145,64933697	64925028,64925933,64926908,64927903,64928158,64928425,64930381,64930589,64931489,64931609,64931868,64932892,64933246,64934473	Gene ID= ENSG00000068971.13 TPM= 49.23 Transcript Type= protein_coding
chr11	65013460	65014054	65013460	65014054	-	transcript3149.chr11.nnic@NA	transcript3149.chr11.nnic	NA	65013460	65014054	Gene ID= novel_gene_chr11_3150 TPM= 2.9 Transcript Type= NA
chr11	65014113	65022184	65014113	65022184	+	ENST00000246747.8@ARL2	ENST00000246747.8	protein_coding	65014113,65018364,65018571,65020419,65021721	65014272,65018474,65018733,65020499,65022184	Gene ID= ENSG00000213465.7 TPM= 210.44 Transcript Type= protein_coding
chr11	65014180	65022184	65014180	65022184	+	ENST00000529384.5@ARL2	ENST00000529384.5	protein_coding	65014180,65018364,65018571,65020419,65021721,65021971	65014272,65018474,65018733,65020499,65021888,65022184	Gene ID= ENSG00000213465.7 TPM= 10.62 Transcript Type= protein_coding
chr11	65014192	65022160	65014192	65022160	+	ENST00000533729.1@ARL2	ENST00000533729.1	protein_coding	65014192,65018364,65018571,65021721	65014272,65018474,65018733,65022160	Gene ID= ENSG00000213465.7 TPM= 4.83 Transcript Type= protein_coding
chr11	65027408	65040572	65027408	65040572	+	ENST00000377244.7@SNX15	ENST00000377244.7	protein_coding	65027408,65032168,65032431,65034847,65035059,65035520,65038572,65039686	65027636,65032203,65032551,65034962,65035206,65035663,65038829,65040572	Gene ID= ENSG00000110025.12 TPM= 34.75 Transcript Type= protein_coding
chr11	65040904	65044827	65040904	65044827	+	ENST00000398846.5@SAC3D1	ENST00000398846.5	protein_coding	65040904,65044225	65041866,65044827	Gene ID= ENSG00000168061.14 TPM= 11.1 Transcript Type= protein_coding
chr11	65040970	65044828	65040970	65044828	+	ENST00000530213.5@SAC3D1	ENST00000530213.5	protein_coding	65040970,65044225	65041928,65044828	Gene ID= ENSG00000168061.14 TPM= 2.41 Transcript Type= processed_transcript
chr11	65084189	65088400	65084189	65088400	+	transcript3158.chr11.nic@ZFPL1	transcript3158.chr11.nic	protein_coding	65084189,65084691,65085115,65086720,65086928,65087316,65087928	65084378,65084800,65086608,65086792,65087074,65087433,65088400	Gene ID= ENSG00000162300.11 TPM= 4.83 Transcript Type= NA
chr11	65084431	65088400	65084431	65088400	+	transcript3159.chr11.nic@ZFPL1	transcript3159.chr11.nic	protein_coding	65084431,65085115,65086415,65086720,65086928,65087316,65087928	65084800,65085226,65086608,65086792,65087074,65087433,65088400	Gene ID= ENSG00000162300.11 TPM= 1.93 Transcript Type= NA
chr11	65084235	65088400	65084235	65088400	+	ENST00000294258.7@ZFPL1	ENST00000294258.7	protein_coding	65084235,65084691,65085115,65086415,65086720,65086928,65087316,65087928	65084378,65084800,65085226,65086608,65086792,65087074,65087433,65088400	Gene ID= ENSG00000162300.11 TPM= 38.61 Transcript Type= protein_coding
chr11	65084223	65085012	65084223	65085012	+	ENST00000525509.1@ZFPL1	ENST00000525509.1	protein_coding	65084223,65084691	65084378,65085012	Gene ID= ENSG00000162300.11 TPM= 1.93 Transcript Type= protein_coding
chr11	65111854	65116356	65111854	65116356	+	ENST00000279263.11@TM7SF2	ENST00000279263.11	protein_coding	65111854,65112515,65112811,65113220,65113491,65114713,65114913,65115314,65115476,65115893	65112067,65112711,65112865,65113414,65113594,65114832,65115081,65115394,65115598,65116356	Gene ID= ENSG00000149809.14 TPM= 5.79 Transcript Type= protein_coding
chr11	65111902	65116230	65111902	65116230	+	ENST00000530650.5@TM7SF2	ENST00000530650.5	protein_coding	65111902,65113220,65113491,65114713,65114913,65115314,65115476,65115893	65112865,65113414,65113594,65114832,65115081,65115394,65115598,65116230	Gene ID= ENSG00000149809.14 TPM= 3.86 Transcript Type= retained_intron
chr11	65116403	65117708	65116403	65117708	-	ENST00000310597.5@ZNHIT2	ENST00000310597.5	protein_coding	65116403	65117708	Gene ID= ENSG00000174276.6 TPM= 40.54 Transcript Type= protein_coding
chr11	65120628	65122473	65120628	65122473	-	ENST00000529639.5@FAU	ENST00000529639.5	protein_coding	65122090,65121739,65121500,65120981,65120628	65122473,65121821,65121644,65121036,65120806	Gene ID= ENSG00000149806.10 TPM= 583.05 Transcript Type= protein_coding
chr11	65127279	65134532	65127279	65134532	-	ENST00000294256.12@SYVN1	ENST00000294256.12	protein_coding	65134456,65133470,65133160,65132922,65132732,65132248,65131470,65131274,65131132,65130920,65130660,65130251,65130002,65129729,65128563,65127279	65134532,65133618,65133252,65133074,65132780,65132351,65131596,65131373,65131197,65131036,65130823,65130379,65130172,65129915,65128714,65128488	Gene ID= ENSG00000162298.18 TPM= 45.37 Transcript Type= protein_coding
chr11	65122183	65127356	65122183	65127356	+	ENST00000524482.5@MRPL49	ENST00000524482.5	protein_coding	65122183,65124502,65125488,65125726	65122340,65124652,65125612,65127356	Gene ID= ENSG00000149792.8 TPM= 10.14 Transcript Type= processed_transcript
chr11	65122328	65127371	65122328	65127371	+	ENST00000279242.6@MRPL49	ENST00000279242.6	protein_coding	65122328,65124502,65125488,65125726	65122424,65124652,65125612,65127371	Gene ID= ENSG00000149792.8 TPM= 91.22 Transcript Type= protein_coding
chr11	65180021	65181834	65180021	65181834	-	ENST00000526623.2@AP003068.2	ENST00000526623.2	antisense_RNA	65181225,65180021	65181834,65181072	Gene ID= ENSG00000254614.2 TPM= 2.9 Transcript Type= antisense_RNA
chr11	65181194	65212006	65181194	65212006	+	ENST00000533820.5@CAPN1	ENST00000533820.5	protein_coding	65181194,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65181410,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212006	Gene ID= ENSG00000014216.15 TPM= 24.13 Transcript Type= protein_coding
chr11	65181679	65212001	65181679	65212001	+	transcript3203.chr11.nic@CAPN1	transcript3203.chr11.nic	protein_coding	65181679,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65181782,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212001	Gene ID= ENSG00000014216.15 TPM= 27.99 Transcript Type= NA
chr11	65181745	65212001	65181745	65212001	+	ENST00000524773.5@CAPN1	ENST00000524773.5	protein_coding	65181745,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65181843,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212001	Gene ID= ENSG00000014216.15 TPM= 50.2 Transcript Type= protein_coding
chr11	65181872	65212005	65181872	65212005	+	ENST00000279247.10@CAPN1	ENST00000279247.10	protein_coding	65181872,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65182013,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212005	Gene ID= ENSG00000014216.15 TPM= 101.36 Transcript Type= protein_coding
chr11	65261762	65298685	65261762	65298685	+	ENST00000265465.7@POLA2	ENST00000265465.7	protein_coding	65261762,65266582,65267477,65268672,65275892,65278730,65279538,65280992,65281670,65282479,65287716,65289050,65289799,65294153,65294546,65295540,65295864,65297120	65262371,65266706,65267568,65268729,65275998,65278923,65279626,65281147,65281732,65282521,65287840,65289088,65289872,65294261,65294652,65295599,65295990,65298685	Gene ID= ENSG00000014138.8 TPM= 1.93 Transcript Type= protein_coding
chr11	65314818	65322429	65314818	65322429	+	ENST00000279249.2@CDC42EP2	ENST00000279249.2	protein_coding	65314818,65320544	65314954,65322429	Gene ID= ENSG00000149798.4 TPM= 15.44 Transcript Type= protein_coding
chr11	65333867	65352983	65333867	65352983	+	ENST00000252268.8@DPF2	ENST00000252268.8	protein_coding	65333867,65340385,65340966,65341399,65343745,65343991,65344580,65345666,65345930,65346247,65348850,65351683	65333918,65340545,65341073,65341562,65343837,65344069,65344621,65345803,65346058,65346359,65348931,65352983	Gene ID= ENSG00000133884.9 TPM= 33.79 Transcript Type= protein_coding
chr11	65333754	65353249	65333754	65353249	+	ENST00000528416.5@DPF2	ENST00000528416.5	protein_coding	65333754,65340385,65340966,65341399,65343745,65343991,65345666,65345930,65346247,65348850,65351683	65333918,65340545,65341073,65341562,65343837,65344069,65345803,65346058,65346359,65348931,65353249	Gene ID= ENSG00000133884.9 TPM= 4.83 Transcript Type= protein_coding
chr11	65371373	65375738	65371373	65375738	-	transcript3246.chr11.nnic@NA	transcript3246.chr11.nnic	NA	65371373	65375738	Gene ID= novel_gene_chr11_3247 TPM= 2.9 Transcript Type= NA
chr11	65375194	65382392	65375194	65382392	-	transcript3242.chr11.nnic@SLC25A45	transcript3242.chr11.nnic	protein_coding	65381875,65380132,65379867,65379376,65376818,65375194	65382392,65380234,65379938,65379561,65377076,65376675	Gene ID= ENSG00000162241.12 TPM= 10.62 Transcript Type= NA
chr11	65386596	65410807	65386596	65410807	+	transcript3234.chr11.nnic@FRMD8	transcript3234.chr11.nnic	protein_coding	65386596,65387037,65389361,65393573,65394041,65394259,65396799,65399736,65400724,65404864,65406155,65410431	65386761,65387121,65389528,65393674,65394099,65394425,65397020,65399859,65400867,65405474,65406244,65410807	Gene ID= ENSG00000126391.13 TPM= 1.93 Transcript Type= NA
chr11	65386599	65413525	65386599	65413525	+	ENST00000317568.9@FRMD8	ENST00000317568.9	protein_coding	65386599,65387037,65389361,65393573,65394041,65394259,65396799,65399736,65400724,65404864,65411242	65386761,65387121,65389528,65393674,65394099,65394425,65397020,65399859,65400867,65405068,65413525	Gene ID= ENSG00000126391.13 TPM= 43.92 Transcript Type= protein_coding
chr11	65386657	65413525	65386657	65413525	+	transcript3236.chr11.nnic@FRMD8	transcript3236.chr11.nnic	protein_coding	65386657,65387037,65389361,65393573,65394041,65394259,65396799,65399736,65400724,65404864,65411242	65386761,65387241,65389528,65393674,65394099,65394425,65397020,65399859,65400867,65405068,65413525	Gene ID= ENSG00000126391.13 TPM= 14 Transcript Type= NA
chr11	65422799	65426525	65422799	65426525	+	transcript3250.chr11.nnic@NA	transcript3250.chr11.nnic	NA	65422799	65426525	Gene ID= novel_gene_chr11_3251 TPM= 867.81 Transcript Type= NA
chr11	65429958	65433021	65429958	65433021	+	transcript3256.chr11.nnic@NA	transcript3256.chr11.nnic	NA	65429958	65433021	Gene ID= novel_gene_chr11_3257 TPM= 43.44 Transcript Type= NA
chr11	65435589	65440487	65435589	65440487	+	transcript3254.chr11.nnic@NA	transcript3254.chr11.nnic	NA	65435589	65440487	Gene ID= novel_gene_chr11_3255 TPM= 57.92 Transcript Type= NA
chr11	65449667	65451912	65449667	65451912	-	transcript3274.chr11.nnic@NA	transcript3274.chr11.nnic	NA	65449667	65451912	Gene ID= novel_gene_chr11_3275 TPM= 3.86 Transcript Type= NA
chr11	65451455	65452435	65451455	65452435	+	transcript3272.chr11.nnic@NA	transcript3272.chr11.nnic	NA	65451455	65452435	Gene ID= novel_gene_chr11_3273 TPM= 1.93 Transcript Type= NA
chr11	65455258	65456318	65455258	65456318	+	ENST00000619960.4@AP000769.1	ENST00000619960.4	transcribed_unprocessed_pseudogene	65455258,65455437,65455694	65455331,65455581,65456318	Gene ID= ENSG00000173727.12 TPM= 1.93 Transcript Type= processed_transcript
chr11	65497762	65506469	65497762	65506469	+	ENST00000534336.1@MALAT1	ENST00000534336.1	lincRNA	65497762	65506469	Gene ID= ENSG00000251562.7 TPM= 229.74 Transcript Type= lincRNA
chr11	65525077	65538704	65525077	65538704	+	ENST00000270176.9@SCYL1	ENST00000270176.9	protein_coding	65525077,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65537967,65538270,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704	Gene ID= ENSG00000142186.16 TPM= 45.01 Transcript Type= protein_coding
chr11	65525085	65538704	65525085	65538704	+	ENST00000420247.6@SCYL1	ENST00000420247.6	protein_coding	65525085,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65537037,65537809,65537967,65538270,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704	Gene ID= ENSG00000142186.16 TPM= 45.98 Transcript Type= protein_coding
chr11	65525060	65538704	65525060	65538704	+	transcript3337.chr11.nic@SCYL1	transcript3337.chr11.nic	protein_coding	65525060,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65537037,65537809,65537967,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538704	Gene ID= ENSG00000142186.16 TPM= 9.61 Transcript Type= NA
chr11	65525060	65538704	65525060	65538704	+	transcript3342.chr11.nic@SCYL1	transcript3342.chr11.nic	protein_coding	65525060,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65537037,65537809,65537967	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538704	Gene ID= ENSG00000142186.16 TPM= 6.72 Transcript Type= NA
chr11	65525112	65538704	65525112	65538704	+	ENST00000533862.5@SCYL1	ENST00000533862.5	protein_coding	65525112,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65538004,65538270,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704	Gene ID= ENSG00000142186.16 TPM= 2.35 Transcript Type= protein_coding
chr11	65525121	65538704	65525121	65538704	+	ENST00000524944.5@SCYL1	ENST00000524944.5	protein_coding	65525121,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65537967,65538270	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538704	Gene ID= ENSG00000142186.16 TPM= 1.38 Transcript Type= protein_coding
chr11	65536265	65538704	65536265	65538704	+	ENST00000528545.1@SCYL1	ENST00000528545.1	protein_coding	65536265,65536586,65536986,65537812,65537967,65538270,65538442	65536334,65536750,65537128,65537880,65538182,65538324,65538704	Gene ID= ENSG00000142186.16 TPM= 7.72 Transcript Type= protein_coding
chr11	65570477	65574192	65570477	65574192	+	transcript3381.chr11.nic@SSSCA1	transcript3381.chr11.nic	protein_coding	65570477,65570604,65570886,65571391,65573363	65570510,65570755,65570970,65572960,65574192	Gene ID= ENSG00000173465.7 TPM= 5.31 Transcript Type= NA
chr11	65570459	65574190	65570459	65574190	+	transcript3382.chr11.nic@SSSCA1	transcript3382.chr11.nic	protein_coding	65570459,65570604,65570886,65572443,65573353	65570510,65570755,65570970,65572960,65574190	Gene ID= ENSG00000173465.7 TPM= 3.86 Transcript Type= NA
chr11	65570460	65571888	65570460	65571888	+	ENST00000531405.5@SSSCA1	ENST00000531405.5	protein_coding	65570460,65570886,65571391	65570755,65570970,65571888	Gene ID= ENSG00000173465.7 TPM= 4.83 Transcript Type= protein_coding
chr11	65570430	65571770	65570430	65571770	+	ENST00000309328.7@SSSCA1	ENST00000309328.7	protein_coding	65570430,65570604,65570886,65571391	65570510,65570755,65570970,65571770	Gene ID= ENSG00000173465.7 TPM= 36.68 Transcript Type= protein_coding
chr11	65572462	65574190	65572462	65574190	+	ENST00000449319.2@FAM89B	ENST00000449319.2	protein_coding	65572462,65573353	65572960,65574190	Gene ID= ENSG00000176973.7 TPM= 69.5 Transcript Type= protein_coding
chr11	65572528	65574192	65572528	65574192	+	ENST00000530349.1@FAM89B	ENST00000530349.1	protein_coding	65572528,65573363	65572960,65574192	Gene ID= ENSG00000176973.7 TPM= 114.87 Transcript Type= protein_coding
chr11	65575343	65575985	65575343	65575985	-	transcript3389.chr11.nnic@NA	transcript3389.chr11.nnic	NA	65575343	65575985	Gene ID= novel_gene_chr11_3390 TPM= 3.86 Transcript Type= NA
chr11	65575971	65592650	65575971	65592650	+	transcript3348.chr11.nic@EHBP1L1	transcript3348.chr11.nic	protein_coding	65575971,65579078,65579341,65579936,65580081,65580337,65580928,65581058,65581211,65581539,65583592,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65580963,65581126,65581373,65581965,65583765,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 20.36 Transcript Type= NA
chr11	65576036	65592650	65576036	65592650	+	transcript3352.chr11.nnic@EHBP1L1	transcript3352.chr11.nnic	protein_coding	65576036,65579078,65579341,65579936,65580081,65580337,65580928,65581058,65581211,65583592,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65580963,65581126,65581326,65583765,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 15.53 Transcript Type= NA
chr11	65576029	65592650	65576029	65592650	+	transcript3355.chr11.nic@EHBP1L1	transcript3355.chr11.nic	protein_coding	65576029,65579078,65579341,65579936,65580081,65580337,65580928,65581058,65581211,65581539,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65580963,65581126,65581373,65583765,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 15.53 Transcript Type= NA
chr11	65575971	65592650	65575971	65592650	+	transcript3362.chr11.nnic@EHBP1L1	transcript3362.chr11.nnic	protein_coding	65575971,65579078,65579341,65579936,65580081,65580337,65580928,65581058,65581211,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65580963,65581126,65581326,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 11.19 Transcript Type= NA
chr11	65576038	65592650	65576038	65592650	+	ENST00000309295.8@EHBP1L1	ENST00000309295.8	protein_coding	65576038,65579078,65579341,65579936,65580081,65580337,65581058,65581211,65581539,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65581126,65581373,65583765,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 166.12 Transcript Type= protein_coding
chr11	65576041	65579839	65576041	65579839	+	transcript3387.chr11.nnic@NA	transcript3387.chr11.nnic	NA	65576041	65579839	Gene ID= novel_gene_chr11_3388 TPM= 3.86 Transcript Type= NA
chr11	65608632	65614236	65608632	65614236	-	ENST00000527304.1@MAP3K11	ENST00000527304.1	protein_coding	65608632	65614236	Gene ID= ENSG00000173327.7 TPM= 2.9 Transcript Type= retained_intron
chr11	65597755	65614242	65597755	65614242	-	ENST00000309100.7@MAP3K11	ENST00000309100.7	protein_coding	65613018,65608268,65607922,65607641,65607270,65606691,65605946,65605761,65599394,65597755	65614242,65608448,65608070,65607816,65607513,65606804,65606081,65605852,65599768,65598628	Gene ID= ENSG00000173327.7 TPM= 22.2 Transcript Type= protein_coding
chr11	65638097	65650930	65638097	65650930	+	ENST00000534313.5@SIPA1	ENST00000534313.5	protein_coding	65638097,65640831,65642250,65642463,65644955,65645854,65646221,65646456,65647384,65649262,65649561,65649757,65649950,65650138,65650401,65650569	65638182,65641600,65642377,65642639,65645129,65645957,65646378,65647065,65647658,65649480,65649672,65649865,65650051,65650192,65650479,65650930	Gene ID= ENSG00000213445.9 TPM= 40.54 Transcript Type= protein_coding
chr11	65653596	65663094	65653596	65663094	-	ENST00000406246.7@RELA	ENST00000406246.7	protein_coding	65662826,65662179,65661937,65661687,65660124,65659666,65658718,65658287,65655855,65655688,65653596	65663094,65662205,65662088,65661835,65660215,65659797,65658822,65658499,65655935,65655762,65655000	Gene ID= ENSG00000173039.18 TPM= 84.95 Transcript Type= protein_coding
chr11	65662966	65671718	65662966	65671718	+	transcript3400.chr11.nnic@NA	transcript3400.chr11.nnic	NA	65662966,65663427,65665421,65666131,65671423	65663148,65663683,65665543,65666217,65671718	Gene ID= novel_gene_chr11_3401 TPM= 3.86 Transcript Type= NA
chr11	65662994	65671718	65662994	65671718	+	transcript3407.chr11.nnic@NA	transcript3407.chr11.nnic	NA	65662994,65665421,65666131,65671423	65663148,65665543,65666217,65671718	Gene ID= novel_gene_chr11_3408 TPM= 1.93 Transcript Type= NA
chr11	65711996	65719604	65711996	65719604	+	ENST00000377046.7@KAT5	ENST00000377046.7	protein_coding	65711996,65712379,65712766,65712922,65713348,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047	65712279,65712445,65712834,65713058,65713503,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719604	Gene ID= ENSG00000172977.12 TPM= 23.17 Transcript Type= protein_coding
chr11	65712018	65719604	65712018	65719604	+	ENST00000352980.8@KAT5	ENST00000352980.8	protein_coding	65712018,65712379,65712766,65712922,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047	65712279,65712445,65712834,65713058,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719604	Gene ID= ENSG00000172977.12 TPM= 25.58 Transcript Type= protein_coding
chr11	65712034	65719602	65712034	65719602	+	ENST00000341318.8@KAT5	ENST00000341318.8	protein_coding	65712034,65712766,65712922,65713348,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047	65712445,65712834,65713058,65713503,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719602	Gene ID= ENSG00000172977.12 TPM= 10.14 Transcript Type= protein_coding
chr11	65717673	65720947	65717673	65720947	-	ENST00000308418.8@RNASEH2C	ENST00000308418.8	protein_coding	65720587,65720242,65720045,65717673	65720947,65720417,65720164,65719809	Gene ID= ENSG00000172922.8 TPM= 22.2 Transcript Type= protein_coding
chr11	65719170	65720818	65719170	65720818	-	ENST00000528220.1@RNASEH2C	ENST00000528220.1	protein_coding	65720242,65720045,65719170	65720818,65720164,65719809	Gene ID= ENSG00000172922.8 TPM= 4.83 Transcript Type= protein_coding
chr11	65713901	65720798	65713901	65720798	-	transcript3430.chr11.nnic@RNASEH2C	transcript3430.chr11.nnic	protein_coding	65720045,65713901	65720798,65715317	Gene ID= ENSG00000172922.8 TPM= 1.93 Transcript Type= NA
chr11	65773897	65779882	65773897	65779882	-	transcript3437.chr11.nnic@NA	transcript3437.chr11.nnic	NA	65773897	65779882	Gene ID= novel_gene_chr11_3438 TPM= 13.51 Transcript Type= NA
chr11	65854837	65858333	65854837	65858333	-	ENST00000308162.9@CFL1	ENST00000308162.9	protein_coding	65858097,65855935,65855654,65854837	65858333,65856242,65855730,65855448	Gene ID= ENSG00000172757.12 TPM= 205.13 Transcript Type= protein_coding
chr11	65854975	65857033	65854975	65857033	-	ENST00000527344.5@CFL1	ENST00000527344.5	protein_coding	65856931,65855935,65855654,65854975	65857033,65856242,65855730,65855448	Gene ID= ENSG00000172757.12 TPM= 1.45 Transcript Type= protein_coding
chr11	65854826	65858215	65854826	65858215	-	transcript3445.chr11.nnic@NA	transcript3445.chr11.nnic	NA	65854826	65858215	Gene ID= novel_gene_chr11_3446 TPM= 23.17 Transcript Type= NA
chr11	65860405	65866439	65860405	65866439	+	ENST00000308110.8@MUS81	ENST00000308110.8	protein_coding	65860405,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65863804,65864497,65864720,65865017,65865220,65865811,65865986	65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863721,65863901,65864613,65864815,65865145,65865323,65865894,65866439	Gene ID= ENSG00000172732.11 TPM= 50.2 Transcript Type= protein_coding
chr11	65860403	65867653	65860403	65867653	+	transcript3448.chr11.nic@MUS81	transcript3448.chr11.nic	protein_coding	65860403,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65863804,65864497,65864720,65865017,65865220,65865811,65867257	65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863721,65863901,65864613,65864815,65865145,65865323,65865894,65867653	Gene ID= ENSG00000172732.11 TPM= 1.93 Transcript Type= NA
chr11	65866442	65872874	65866442	65872874	-	transcript3463.chr11.nic@EFEMP2	transcript3463.chr11.nic	protein_coding	65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866810,65866442	65872874,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079,65866712	Gene ID= ENSG00000172638.12 TPM= 2.9 Transcript Type= NA
chr11	65866447	65872655	65866447	65872655	-	transcript3475.chr11.nic@EFEMP2	transcript3475.chr11.nic	protein_coding	65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866447	65872655,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079	Gene ID= ENSG00000172638.12 TPM= 2.9 Transcript Type= NA
chr11	65866447	65872906	65866447	65872906	-	ENST00000307998.10@EFEMP2	ENST00000307998.10	protein_coding	65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866447	65872906,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079	Gene ID= ENSG00000172638.12 TPM= 32.82 Transcript Type= protein_coding
chr11	65879809	65883741	65879809	65883741	+	ENST00000307886.7@CTSW	ENST00000307886.7	protein_coding	65879809,65880202,65881407,65882175,65882430,65882609,65882779,65883069,65883215,65883508	65879941,65880286,65881520,65882329,65882526,65882689,65882904,65883133,65883424,65883741	Gene ID= ENSG00000172543.7 TPM= 2.9 Transcript Type= protein_coding
chr11	65883921	65888539	65883921	65888539	-	ENST00000357519.8@FIBP	ENST00000357519.8	protein_coding	65888334,65887934,65887600,65886322,65885530,65885078,65884935,65884570,65884392,65883921	65888539,65888132,65887726,65886422,65885663,65885186,65884998,65884656,65884489,65884043	Gene ID= ENSG00000172500.12 TPM= 44.4 Transcript Type= protein_coding
chr11	65883921	65888531	65883921	65888531	-	ENST00000338369.6@FIBP	ENST00000338369.6	protein_coding	65888334,65887934,65887600,65886322,65885509,65885078,65884935,65884570,65884392,65883921	65888531,65888132,65887726,65886422,65885663,65885186,65884998,65884656,65884489,65884043	Gene ID= ENSG00000172500.12 TPM= 3.86 Transcript Type= protein_coding
chr11	65892220	65900526	65892220	65900526	-	ENST00000312562.6@FOSL1	ENST00000312562.6	protein_coding	65900241,65896809,65894014,65892220	65900526,65897006,65894121,65893296	Gene ID= ENSG00000175592.8 TPM= 9.65 Transcript Type= protein_coding
chr11	65899432	65900910	65899432	65900910	+	transcript3494.chr11.nnic@NA	transcript3494.chr11.nnic	NA	65899432	65900910	Gene ID= novel_gene_chr11_3495 TPM= 1.93 Transcript Type= NA
chr11	65916833	65918360	65916833	65918360	-	ENST00000530188.1@C11orf68	ENST00000530188.1	protein_coding	65916833	65918360	Gene ID= ENSG00000175573.6 TPM= 11.27 Transcript Type= protein_coding
chr11	65916810	65919062	65916810	65919062	-	ENST00000449692.3@C11orf68	ENST00000449692.3	protein_coding	65918910,65916810	65919062,65918215	Gene ID= ENSG00000175573.6 TPM= 90.9 Transcript Type= protein_coding
chr11	65916808	65919117	65916808	65919117	-	ENST00000438576.2@C11orf68	ENST00000438576.2	protein_coding	65918910,65916808	65919117,65918218	Gene ID= ENSG00000175573.6 TPM= 60.98 Transcript Type= protein_coding
chr11	65919257	65921561	65919257	65921561	+	ENST00000312515.6@DRAP1	ENST00000312515.6	protein_coding	65919257,65919780,65919948,65920343,65920569,65920884,65921330	65919543,65919852,65920041,65920462,65920662,65920972,65921561	Gene ID= ENSG00000175550.7 TPM= 142.87 Transcript Type= protein_coding
chr11	65919724	65921554	65919724	65921554	+	ENST00000532933.1@DRAP1	ENST00000532933.1	protein_coding	65919724,65919948,65920343,65920569,65920884,65921330	65919852,65920041,65920462,65920662,65920972,65921554	Gene ID= ENSG00000175550.7 TPM= 6.27 Transcript Type= protein_coding
chr11	65961689	65979828	65961689	65979828	+	ENST00000312397.9@SART1	ENST00000312397.9	protein_coding	65961689,65964074,65964515,65965092,65965342,65965702,65965887,65966076,65966350,65967259,65967471,65967679,65976395,65976656,65977014,65977563,65977764,65978600,65978793,65979012	65962093,65964131,65964570,65965218,65965447,65965779,65965986,65966218,65966556,65967383,65967586,65967821,65976568,65976766,65977101,65977653,65977899,65978689,65978914,65979828	Gene ID= ENSG00000175467.14 TPM= 2.9 Transcript Type= protein_coding
chr11	65996545	66002157	65996545	66002157	-	ENST00000312234.6@EIF1AD	ENST00000312234.6	protein_coding	66001910,66000303,66000053,65999567,65999350,65996545	66002157,66000476,66000161,65999675,65999397,65998743	Gene ID= ENSG00000175376.8 TPM= 26.06 Transcript Type= protein_coding
chr11	66002228	66004146	66002228	66004146	+	ENST00000445560.6@BANF1	ENST00000445560.6	protein_coding	66002228,66003235,66003626	66002513,66003373,66004146	Gene ID= ENSG00000175334.7 TPM= 12.87 Transcript Type= protein_coding
chr11	66002079	66004149	66002079	66004149	+	ENST00000312175.6@BANF1	ENST00000312175.6	protein_coding	66002079,66003235,66003626	66002570,66003373,66004149	Gene ID= ENSG00000175334.7 TPM= 144.15 Transcript Type= protein_coding
chr11	66002480	66004146	66002480	66004146	+	ENST00000524628.1@BANF1	ENST00000524628.1	protein_coding	66002480,66003626	66002570,66004146	Gene ID= ENSG00000175334.7 TPM= 20.75 Transcript Type= processed_transcript
chr11	66002581	66004131	66002581	66004131	+	ENST00000533166.5@BANF1	ENST00000533166.5	protein_coding	66002581,66003235,66003626	66003070,66003373,66004131	Gene ID= ENSG00000175334.7 TPM= 2.9 Transcript Type= protein_coding
chr11	66052336	66068911	66052336	66068911	+	ENST00000322535.10@SF3B2	ENST00000322535.10	protein_coding	66052336,66052673,66053027,66055076,66055535,66056838,66057266,66058054,66058314,66058830,66059201,66059515,66059782,66060582,66061686,66061891,66063009,66063400,66063628,66067946,66068148,66068674	66052517,66052719,66053104,66055315,66055585,66056955,66057375,66058150,66058405,66059045,66059338,66059595,66060009,66060731,66061775,66061998,66063116,66063542,66063729,66068045,66068333,66068911	Gene ID= ENSG00000087365.15 TPM= 207.06 Transcript Type= protein_coding
chr11	66052342	66068878	66052342	66068878	+	transcript3542.chr11.nic@SF3B2	transcript3542.chr11.nic	protein_coding	66052342,66052673,66053027,66055076,66055535,66056838,66057266,66058054,66058314,66059201,66059515,66059782,66060582,66061686,66061891,66063009,66063400,66063628,66067946,66068148,66068674	66052517,66052719,66053104,66055315,66055585,66056955,66057375,66058150,66059045,66059338,66059595,66060009,66060731,66061775,66061998,66063116,66063542,66063729,66068045,66068333,66068878	Gene ID= ENSG00000087365.15 TPM= 7.24 Transcript Type= NA
chr11	66070262	66243504	66070262	66243504	+	transcript3552.chr11.nnic@PACS1	transcript3552.chr11.nnic	protein_coding	66070262,66193486,66210362,66211134,66216119,66216520,66216695,66219746,66220631,66221149,66227504,66230548,66230805,66232172,66232960,66233785,66234132,66235301,66235898,66238804,66239142,66241427,66242912,66243165	66070842,66193573,66210451,66211259,66216263,66216611,66216775,66219805,66220786,66221247,66227584,66230663,66230940,66232276,66233066,66233939,66234242,66235403,66235940,66238846,66239277,66241653,66243031,66243504	Gene ID= ENSG00000175115.11 TPM= 5.79 Transcript Type= NA
chr11	66070454	66244747	66070454	66244747	+	ENST00000320580.8@PACS1	ENST00000320580.8	protein_coding	66070454,66193486,66210362,66211134,66216119,66216520,66216695,66219746,66220631,66221154,66227504,66230548,66230805,66232172,66232960,66233785,66234132,66235301,66235898,66238804,66239142,66241427,66242912,66243165	66070842,66193573,66210451,66211259,66216263,66216611,66216775,66219805,66220791,66221247,66227584,66230663,66230940,66232276,66233066,66233939,66234242,66235403,66235940,66238846,66239277,66241653,66243031,66244747	Gene ID= ENSG00000175115.11 TPM= 18.34 Transcript Type= protein_coding
chr11	66257760	66267860	66257760	66267860	+	transcript3560.chr11.nnic@KLC2	transcript3560.chr11.nnic	protein_coding	66257760,66258584,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66267174	66257871,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267860	Gene ID= ENSG00000174996.11 TPM= 13.27 Transcript Type= NA
chr11	66257703	66267860	66257703	66267860	+	ENST00000316924.9@KLC2	ENST00000316924.9	protein_coding	66257703,66258547,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66266873	66257871,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267860	Gene ID= ENSG00000174996.11 TPM= 38.37 Transcript Type= protein_coding
chr11	66268533	66277492	66268533	66277492	+	ENST00000311481.10@RAB1B	ENST00000311481.10	protein_coding	66268533,66271797,66272157,66272365,66275804,66276044	66268693,66271869,66272252,66272460,66275935,66277492	Gene ID= ENSG00000174903.15 TPM= 106.18 Transcript Type= protein_coding
chr11	66284580	66289170	66284580	66289170	-	ENST00000376901.8@YIF1A	ENST00000376901.8	protein_coding	66288955,66288081,66287812,66287598,66285701,66285381,66284873,66284580	66289170,66288292,66287916,66287676,66285758,66285536,66284966,66284783	Gene ID= ENSG00000174851.15 TPM= 185.89 Transcript Type= protein_coding
chr11	66284580	66289173	66284580	66289173	-	transcript3582.chr11.nic@YIF1A	transcript3582.chr11.nic	protein_coding	66288955,66288081,66287812,66287598,66285701,66285381,66284580	66289173,66288292,66287916,66287676,66285758,66285536,66284966	Gene ID= ENSG00000174851.15 TPM= 4.93 Transcript Type= NA
chr11	66284580	66289145	66284580	66289145	-	ENST00000359461.10@YIF1A	ENST00000359461.10	protein_coding	66288955,66288081,66287812,66287598,66285701,66284873,66284580	66289145,66288292,66287916,66287676,66285758,66284966,66284783	Gene ID= ENSG00000174851.15 TPM= 12.78 Transcript Type= protein_coding
chr11	66314487	66317044	66314487	66317044	-	ENST00000311330.3@CD248	ENST00000311330.3	protein_coding	66314487	66317044	Gene ID= ENSG00000174807.3 TPM= 32.82 Transcript Type= protein_coding
chr11	66332062	66336529	66332062	66336529	-	ENST00000311320.8@RIN1	ENST00000311320.8	protein_coding	66336317,66335978,66335762,66335610,66335407,66334514,66333919,66333527,66333258,66332062	66336529,66336158,66335876,66335682,66335498,66335251,66334224,66333658,66333409,66332752	Gene ID= ENSG00000174791.10 TPM= 8.69 Transcript Type= protein_coding
chr11	66337339	66345125	66337339	66345125	-	ENST00000359957.7@BRMS1	ENST00000359957.7	protein_coding	66344972,66342096,66341533,66341206,66340967,66340774,66340121,66338721,66338243,66337339	66345125,66342241,66341623,66341333,66341046,66340870,66340213,66338785,66338282,66337889	Gene ID= ENSG00000174744.13 TPM= 56.95 Transcript Type= protein_coding
chr11	66337333	66345119	66337333	66345119	-	ENST00000425825.6@BRMS1	ENST00000425825.6	protein_coding	66344972,66342096,66341533,66341206,66340967,66340774,66340121,66338721,66338243,66337333	66345119,66342241,66341623,66341333,66341046,66340870,66340213,66338785,66338282,66337807	Gene ID= ENSG00000174744.13 TPM= 7.72 Transcript Type= protein_coding
chr11	66345372	66347692	66345372	66347692	-	ENST00000311181.4@B4GAT1	ENST00000311181.4	protein_coding	66346490,66345372	66347692,66346240	Gene ID= ENSG00000174684.6 TPM= 34.75 Transcript Type= protein_coding
chr11	66360064	66362238	66360064	66362238	-	transcript3614.chr11.nnic@NA	transcript3614.chr11.nnic	NA	66360064	66362238	Gene ID= novel_gene_chr11_3615 TPM= 3.86 Transcript Type= NA
chr11	66362102	66364535	66362102	66364535	+	transcript3612.chr11.nnic@NA	transcript3612.chr11.nnic	NA	66362102	66364535	Gene ID= novel_gene_chr11_3613 TPM= 3.21 Transcript Type= NA
chr11	66362523	66372214	66362523	66372214	-	ENST00000546034.1@SLC29A2	ENST00000546034.1	protein_coding	66372010,66371563,66371244,66369369,66369060,66368537,66367772,66367464,66366431,66366126,66365936,66364225,66362523	66372214,66371611,66371325,66369532,66369199,66368671,66367869,66367548,66366564,66366231,66366021,66364424,66363547	Gene ID= ENSG00000174669.11 TPM= 36.61 Transcript Type= protein_coding
chr11	66362521	66371781	66362521	66371781	-	transcript3609.chr11.nnic@SLC29A2	transcript3609.chr11.nnic	protein_coding	66371563,66369369,66369060,66368537,66367772,66367464,66366126,66365936,66364225,66362521	66371781,66369532,66369199,66368671,66367869,66367548,66366231,66366021,66364424,66363547	Gene ID= ENSG00000174669.11 TPM= 28.17 Transcript Type= NA
chr11	66362522	66371820	66362522	66371820	-	ENST00000357440.6@SLC29A2	ENST00000357440.6	protein_coding	66371563,66371244,66369369,66369060,66368537,66367772,66367464,66366431,66366126,66365936,66364225,66362522	66371820,66371325,66369532,66369199,66368671,66367869,66367548,66366564,66366231,66366021,66364424,66363547	Gene ID= ENSG00000174669.11 TPM= 67.11 Transcript Type= protein_coding
chr11	66362522	66371820	66362522	66371820	-	ENST00000540386.5@SLC29A2	ENST00000540386.5	protein_coding	66371563,66371244,66369369,66369060,66368537,66367772,66367464,66366431,66366126,66365936,66364225,66362522	66371820,66371325,66369532,66369199,66368671,66367869,66367548,66366564,66366191,66366021,66364424,66363547	Gene ID= ENSG00000174669.11 TPM= 23.67 Transcript Type= nonsense_mediated_decay
chr11	66362522	66371820	66362522	66371820	-	ENST00000619145.4@SLC29A2	ENST00000619145.4	protein_coding	66371563,66371244,66369369,66369060,66368537,66367772,66367464,66366126,66365936,66364225,66362522	66371820,66371325,66369532,66369199,66368671,66367869,66367548,66366231,66366021,66364424,66363547	Gene ID= ENSG00000174669.11 TPM= 14.02 Transcript Type= protein_coding
chr11	66435075	66438848	66435075	66438848	-	ENST00000310999.11@MRPL11	ENST00000310999.11	protein_coding	66438632,66438164,66437350,66437104,66435075	66438848,66438259,66437443,66437263,66436112	Gene ID= ENSG00000174547.13 TPM= 4.83 Transcript Type= protein_coding
chr11	66435838	66438826	66435838	66438826	-	ENST00000534488.5@MRPL11	ENST00000534488.5	protein_coding	66438632,66438164,66437350,66437104,66435838	66438826,66438259,66437435,66437263,66436112	Gene ID= ENSG00000174547.13 TPM= 58.88 Transcript Type= nonsense_mediated_decay
chr11	66466869	66477337	66466869	66477337	+	ENST00000320740.11@PELI3	ENST00000320740.11	protein_coding	66466869,66468128,66468833,66471242,66472369,66473241,66473737,66475598	66467027,66468280,66468904,66471371,66472470,66473435,66473925,66477337	Gene ID= ENSG00000174516.14 TPM= 67.57 Transcript Type= protein_coding
chr11	66474247	66480255	66474247	66480255	-	transcript3637.chr11.nic@AP002748.3	transcript3637.chr11.nic	antisense_RNA	66480039,66474247	66480255,66475104	Gene ID= ENSG00000255517.6 TPM= 1.93 Transcript Type= NA
chr11	66480013	66509657	66480013	66509657	+	ENST00000532677.5@DPP3	ENST00000532677.5	protein_coding	66480013,66482196,66485173,66486540,66487268,66487914,66491253,66491494,66491698,66492716,66493067,66493541,66495206,66495365,66495630,66497298,66504612,66509079	66480465,66482470,66485262,66486677,66487342,66488007,66491383,66491624,66491756,66492910,66493179,66493633,66495268,66495489,66495750,66497477,66504774,66509657	Gene ID= ENSG00000254986.7 TPM= 41.51 Transcript Type= protein_coding
chr11	66510609	66533627	66510609	66533627	+	ENST00000318312.11@BBS1	ENST00000318312.11	protein_coding	66510609,66511013,66511205,66514406,66515540,66515693,66515861,66519617,66521270,66523456,66523724,66526123,66526649,66529819,66530894,66531656,66531951	66510706,66511089,66511239,66514678,66515586,66515731,66515933,66519748,66521376,66523576,66523882,66526192,66526807,66529952,66531028,66531742,66533627	Gene ID= ENSG00000174483.19 TPM= 15.44 Transcript Type= protein_coding
chr11	66535898	66546238	66535898	66546238	-	ENST00000310442.4@ZDHHC24	ENST00000310442.4	protein_coding	66545723,66543704,66535898	66546238,66543981,66539824	Gene ID= ENSG00000174165.7 TPM= 5.31 Transcript Type= protein_coding
chr11	66520637	66546036	66520637	66546036	-	ENST00000534073.5@ZDHHC24	ENST00000534073.5	protein_coding	66545723,66543704,66526936,66524155,66520637	66546036,66543981,66527006,66524276,66521466	Gene ID= ENSG00000174165.7 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chr11	66540975	66541417	66540975	66541417	+	transcript3653.chr11.nnic@NA	transcript3653.chr11.nnic	NA	66540975	66541417	Gene ID= novel_gene_chr11_3654 TPM= 2.9 Transcript Type= NA
chr11	66546841	66563329	66546841	66563329	+	ENST00000513398.1@ACTN3	ENST00000513398.1	protein_coding	66546841,66551239,66551528,66554045,66554536,66555130,66555286,66556145,66557133,66557699,66558027,66559236,66559968,66560171,66560573,66561227,66561458,66562022,66562257,66562796,66563035	66547084,66551353,66551647,66554131,66554623,66555208,66555367,66556230,66557225,66557929,66558174,66559386,66560076,66560311,66560755,66561361,66561637,66562168,66562322,66562954,66563329	Gene ID= ENSG00000248746.5 TPM= 786.41 Transcript Type= protein_coding
chr11	66563463	66568596	66563463	66568596	-	ENST00000310325.9@CTSF	ENST00000310325.9	protein_coding	66568274,66567984,66567444,66567246,66566291,66566022,66565831,66565671,66564887,66564742,66564558,66564088,66563463	66568596,66568082,66567662,66567321,66566404,66566167,66565927,66565751,66565006,66564806,66564648,66564146,66564007	Gene ID= ENSG00000174080.10 TPM= 154.45 Transcript Type= protein_coding
chr11	66592821	66606019	66592821	66606019	+	ENST00000533244.5@CCS	ENST00000533244.5	protein_coding	66592821,66593642,66599116,66599459,66600489,66605339,66605489,66605702	66593300,66593714,66599253,66599636,66600549,66605416,66605592,66606019	Gene ID= ENSG00000173992.8 TPM= 11.58 Transcript Type= protein_coding
chr11	66616582	66627347	66616582	66627347	+	ENST00000310137.4@RBM14	ENST00000310137.4	protein_coding	66616582,66624214,66626461	66617057,66625678,66627347	Gene ID= ENSG00000239306.4 TPM= 33.79 Transcript Type= protein_coding
chr11	66638617	66646469	66638617	66646469	+	ENST00000310092.11@RBM4	ENST00000310092.11	protein_coding	66638617,66639700,66643450,66646027	66638752,66640123,66644140,66646469	Gene ID= ENSG00000173933.19 TPM= 28.96 Transcript Type= protein_coding
chr11	66638672	66646452	66638672	66646452	+	ENST00000408993.6@RBM4	ENST00000408993.6	protein_coding	66638672,66639700,66643450,66646027	66638893,66640123,66644140,66646452	Gene ID= ENSG00000173933.19 TPM= 21.24 Transcript Type= protein_coding
chr11	66638698	66646468	66638698	66646468	+	ENST00000398692.8@RBM4	ENST00000398692.8	protein_coding	66638698,66639700,66646027	66638752,66640123,66646468	Gene ID= ENSG00000173933.19 TPM= 5.79 Transcript Type= protein_coding
chr11	66664998	66677921	66664998	66677921	-	ENST00000310046.8@RBM4B	ENST00000310046.8	protein_coding	66677764,66676668,66668615,66664998	66677921,66677091,66669291,66665578	Gene ID= ENSG00000173914.11 TPM= 1.93 Transcript Type= protein_coding
chr11	66667699	66677914	66667699	66677914	-	transcript3705.chr11.nic@RBM4B	transcript3705.chr11.nic	protein_coding	66677764,66676668,66667699	66677914,66677091,66669291	Gene ID= ENSG00000173914.11 TPM= 4.83 Transcript Type= NA
chr11	66843412	66846546	66843412	66846546	+	ENST00000309657.7@RCE1	ENST00000309657.7	protein_coding	66843412,66843759,66843956,66844286,66844869,66845166,66845500,66845860	66843640,66843861,66844039,66844364,66845036,66845237,66845562,66846546	Gene ID= ENSG00000173653.7 TPM= 8.69 Transcript Type= protein_coding
chr11	66843723	66846528	66843723	66846528	+	ENST00000525356.1@RCE1	ENST00000525356.1	protein_coding	66843723,66843960,66844286,66844869,66845166,66845500,66845860	66843861,66844039,66844364,66845036,66845237,66845562,66846528	Gene ID= ENSG00000173653.7 TPM= 1.93 Transcript Type= protein_coding
chr11	66848525	66958376	66848525	66958376	-	ENST00000393958.6@PC	ENST00000393958.6	protein_coding	66958322,66952430,66872024,66871687,66871315,66871052,66870775,66870302,66868846,66866187,66863774,66853239,66852747,66852439,66851790,66851040,66850674,66850220,66849937,66849611,66849230,66848525	66958376,66952468,66872159,66871871,66871480,66871197,66870892,66870453,66868964,66866349,66863956,66853383,66852836,66852660,66851946,66851280,66850923,66850464,66850116,66849859,66849370,66849147	Gene ID= ENSG00000173599.13 TPM= 9.17 Transcript Type= protein_coding
chr11	66848526	66958376	66848526	66958376	-	ENST00000393960.5@PC	ENST00000393960.5	protein_coding	66958322,66954249,66952430,66872024,66871687,66871315,66871052,66870775,66870302,66868846,66866187,66863774,66853239,66852747,66852439,66851790,66851040,66850674,66850220,66849937,66849611,66849230,66848526	66958376,66954436,66952468,66872159,66871871,66871480,66871197,66870892,66870453,66868964,66866349,66863956,66853383,66852836,66852660,66851946,66851280,66850923,66850464,66850116,66849859,66849370,66849147	Gene ID= ENSG00000173599.13 TPM= 5.31 Transcript Type= protein_coding
chr11	66856700	66860475	66856700	66860475	+	transcript3719.chr11.nic@LRFN4	transcript3719.chr11.nic	protein_coding	66856700,66857735,66859637	66857296,66859093,66860475	Gene ID= ENSG00000173621.8 TPM= 15.13 Transcript Type= NA
chr11	66856706	66860475	66856706	66860475	+	transcript3720.chr11.nic@LRFN4	transcript3720.chr11.nic	protein_coding	66856706,66857735,66859637	66856864,66859093,66860475	Gene ID= ENSG00000173621.8 TPM= 6.44 Transcript Type= NA
chr11	66856727	66860475	66856727	66860475	+	transcript3721.chr11.nnic@LRFN4	transcript3721.chr11.nnic	protein_coding	66856727,66857513,66859637	66857296,66859093,66860475	Gene ID= ENSG00000173621.8 TPM= 8.37 Transcript Type= NA
chr11	67056818	67072013	67056818	67072013	+	ENST00000308831.6@RHOD	ENST00000308831.6	protein_coding	67056818,67065896,67066738,67070425,67071435	67057034,67065983,67066847,67070559,67072013	Gene ID= ENSG00000173156.6 TPM= 23.17 Transcript Type= protein_coding
chr11	67119269	67257665	67119269	67257665	+	ENST00000398645.6@KDM2A	ENST00000398645.6	protein_coding	67119269,67121234,67180079,67181320,67181846,67207510,67215340,67215856,67217731,67219288,67228037,67231566,67243009,67245189,67245985,67248281,67250086,67252694,67253453,67254203,67254874	67120049,67121358,67180217,67181398,67181892,67207688,67215446,67215949,67217884,67219403,67228163,67231960,67243092,67245458,67246116,67248370,67250346,67252857,67253611,67254418,67257665	Gene ID= ENSG00000173120.14 TPM= 15.93 Transcript Type= protein_coding
chr11	67240047	67256373	67240047	67256373	+	ENST00000530342.2@KDM2A	ENST00000530342.2	protein_coding	67240047,67243009,67245189,67245985,67248281,67250086,67252694,67253453,67254203,67254874	67240369,67243092,67245458,67246116,67248370,67250798,67252857,67253611,67254418,67256373	Gene ID= ENSG00000173120.14 TPM= 8.21 Transcript Type= protein_coding
chr11	67266410	67286556	67266410	67286556	+	ENST00000308595.9@GRK2	ENST00000308595.9	protein_coding	67266410,67277272,67279200,67279418,67279626,67279839,67280732,67281093,67281459,67281650,67281822,67282271,67282435,67282752,67283128,67283707,67283854,67284211,67284847,67285075,67285286	67266812,67277348,67279273,67279519,67279700,67279900,67280783,67281184,67281558,67281728,67281952,67282365,67282542,67282818,67283228,67283773,67283949,67284373,67284983,67285188,67286556	Gene ID= ENSG00000173020.10 TPM= 127.74 Transcript Type= protein_coding
chr11	67268359	67270227	67268359	67270227	-	transcript3752.chr11.nnic@NA	transcript3752.chr11.nnic	NA	67268359	67270227	Gene ID= novel_gene_chr11_3753 TPM= 1.93 Transcript Type= NA
chr11	67274497	67276678	67274497	67276678	-	transcript3754.chr11.nnic@NA	transcript3754.chr11.nnic	NA	67274497	67276678	Gene ID= novel_gene_chr11_3755 TPM= 3.86 Transcript Type= NA
chr11	67288547	67302481	67288547	67302481	+	ENST00000447274.6@ANKRD13D	ENST00000447274.6	protein_coding	67288547,67290078,67290322,67291476,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119	67289550,67290213,67290446,67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301398,67301651,67301823,67302481	Gene ID= ENSG00000172932.14 TPM= 4.83 Transcript Type= protein_coding
chr11	67289291	67302483	67289291	67302483	+	ENST00000511455.6@ANKRD13D	ENST00000511455.6	protein_coding	67289291,67290078,67290322,67291476,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119	67289550,67290213,67290446,67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301398,67301651,67301823,67302483	Gene ID= ENSG00000172932.14 TPM= 1.93 Transcript Type= protein_coding
chr11	67303448	67312600	67303448	67312600	+	ENST00000308127.8@SSH3	ENST00000308127.8	protein_coding	67303448,67304118,67304773,67306838,67307042,67307371,67307549,67307846,67308174,67308412,67309397,67309768,67310066,67311591	67303691,67304155,67305007,67306962,67307113,67307436,67307737,67307939,67308302,67308458,67309543,67309968,67310339,67312600	Gene ID= ENSG00000172830.12 TPM= 8.69 Transcript Type= protein_coding
chr11	67351548	67353518	67351548	67353518	-	ENST00000530584.5@POLD4	ENST00000530584.5	protein_coding	67353294,67352988,67352691,67351548	67353518,67353077,67352802,67352019	Gene ID= ENSG00000175482.8 TPM= 13.2 Transcript Type= protein_coding
chr11	67351548	67353078	67351548	67353078	-	ENST00000533429.1@POLD4	ENST00000533429.1	protein_coding	67352691,67351548	67353078,67352019	Gene ID= ENSG00000175482.8 TPM= 12.55 Transcript Type= retained_intron
chr11	67351548	67353301	67351548	67353301	-	transcript3762.chr11.nnic@AP003419.2	transcript3762.chr11.nnic	protein_coding	67353183,67352988,67352691,67351548	67353301,67353077,67352802,67352019	Gene ID= ENSG00000256514.1 TPM= 14.16 Transcript Type= NA
chr11	67351548	67353562	67351548	67353562	-	transcript3766.chr11.nic@AP003419.2	transcript3766.chr11.nic	protein_coding	67352988,67352691,67351548	67353562,67352802,67352019	Gene ID= ENSG00000256514.1 TPM= 19.95 Transcript Type= NA
chr11	67351549	67353537	67351549	67353537	-	transcript3770.chr11.nnic@NA	transcript3770.chr11.nnic	NA	67351549	67353537	Gene ID= novel_gene_chr11_3771 TPM= 2.9 Transcript Type= NA
chr11	67391952	67398409	67391952	67398409	+	ENST00000307980.6@RAD9A	ENST00000307980.6	protein_coding	67391952,67392161,67392654,67393496,67393691,67395716,67395912,67396111,67396263,67397179,67397464	67392078,67392231,67392782,67393610,67393790,67395825,67396021,67396175,67396400,67397386,67398409	Gene ID= ENSG00000172613.7 TPM= 5.79 Transcript Type= protein_coding
chr11	67398183	67401577	67398183	67401577	-	transcript3777.chr11.nnic@PPP1CA	transcript3777.chr11.nnic	protein_coding	67401385,67401068,67400689,67399561,67398940,67398722,67398183	67401577,67401194,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 17.62 Transcript Type= NA
chr11	67398201	67401931	67398201	67401931	-	ENST00000376745.8@PPP1CA	ENST00000376745.8	protein_coding	67401728,67401068,67400689,67399561,67398940,67398722,67398201	67401931,67401199,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 145.04 Transcript Type= protein_coding
chr11	67398201	67401604	67398201	67401604	-	ENST00000526510.5@PPP1CA	ENST00000526510.5	protein_coding	67401068,67400689,67399561,67398940,67398722,67398201	67401604,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 7 Transcript Type= retained_intron
chr11	67398201	67401577	67398201	67401577	-	ENST00000532446.5@PPP1CA	ENST00000532446.5	protein_coding	67401385,67401068,67400689,67399561,67398940,67398722,67398201	67401577,67401199,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 2.17 Transcript Type= processed_transcript
chr11	67415678	67425605	67415678	67425605	+	transcript3795.chr11.nic@CARNS1	transcript3795.chr11.nic	protein_coding	67415678,67416176,67417407,67418431,67418756,67419487,67419753,67420609,67420939,67423375	67415763,67416202,67417677,67418520,67419243,67419661,67419838,67420840,67421219,67425605	Gene ID= ENSG00000172508.10 TPM= 25.1 Transcript Type= NA
chr11	67415678	67425605	67415678	67425605	+	transcript3802.chr11.nnic@CARNS1	transcript3802.chr11.nnic	protein_coding	67415678,67418431,67418756,67419487,67419753,67420609,67420939,67423375	67415763,67418520,67419243,67419661,67419838,67420840,67421219,67425605	Gene ID= ENSG00000172508.10 TPM= 8.69 Transcript Type= NA
chr11	67428456	67435408	67428456	67435408	+	transcript3788.chr11.nic@RPS6KB2	transcript3788.chr11.nic	protein_coding	67428456,67428982,67429120,67429527,67431368,67432600,67432737,67432952,67433126,67433340,67433995,67434198,67434377,67434582,67434989	67428623,67429022,67429240,67429595,67431515,67432657,67432837,67433042,67433194,67433447,67434057,67434275,67434484,67434694,67435408	Gene ID= ENSG00000175634.14 TPM= 3.7 Transcript Type= NA
chr11	67428501	67435408	67428501	67435408	+	ENST00000312629.9@RPS6KB2	ENST00000312629.9	protein_coding	67428501,67428982,67429120,67429527,67431368,67432600,67432737,67432952,67433126,67433340,67433995,67434198,67434377,67434582,67434989	67428623,67429022,67429240,67429595,67431515,67432657,67432837,67433042,67433216,67433447,67434057,67434275,67434484,67434694,67435408	Gene ID= ENSG00000175634.14 TPM= 46.17 Transcript Type= protein_coding
chr11	67428504	67435344	67428504	67435344	+	ENST00000528964.5@RPS6KB2	ENST00000528964.5	protein_coding	67428504,67428982,67429120,67429527,67431368,67432353,67432600,67432737,67432952,67433126,67433340,67433995,67434198,67434377,67434582,67434989	67428623,67429022,67429240,67429595,67431515,67432492,67432657,67432837,67433042,67433216,67433447,67434057,67434275,67434484,67434694,67435344	Gene ID= ENSG00000175634.14 TPM= 1.28 Transcript Type= nonsense_mediated_decay
chr11	67464353	67469272	67464353	67469272	-	transcript3819.chr11.nic@TMEM134	transcript3819.chr11.nic	protein_coding	67469019,67468028,67467501,67467312,67464803,67464353	67469272,67468092,67467563,67467388,67464856,67464696	Gene ID= ENSG00000172663.8 TPM= 6.89 Transcript Type= NA
chr11	67464355	67469272	67464355	67469272	-	transcript3822.chr11.nic@TMEM134	transcript3822.chr11.nic	protein_coding	67469019,67468028,67467501,67467312,67465056,67464355	67469272,67468092,67467590,67467388,67465100,67464856	Gene ID= ENSG00000172663.8 TPM= 5.93 Transcript Type= NA
chr11	67464392	67469250	67464392	67469250	-	ENST00000393877.3@TMEM134	ENST00000393877.3	protein_coding	67469019,67468028,67467501,67467312,67464803,67464392	67469250,67468092,67467590,67467388,67464856,67464696	Gene ID= ENSG00000172663.8 TPM= 30.89 Transcript Type= protein_coding
chr11	67464353	67469239	67464353	67469239	-	ENST00000545682.5@TMEM134	ENST00000545682.5	protein_coding	67469019,67468028,67467501,67467312,67465056,67464803,67464353	67469239,67468092,67467590,67467388,67465267,67464856,67464696	Gene ID= ENSG00000172663.8 TPM= 5.93 Transcript Type= nonsense_mediated_decay
chr11	67483041	67491103	67483041	67491103	+	ENST00000279146.7@AIP	ENST00000279146.7	protein_coding	67483041,67487006,67489267,67490038,67490316,67490788	67483257,67487185,67489455,67490214,67490457,67491103	Gene ID= ENSG00000110711.9 TPM= 55.99 Transcript Type= protein_coding
chr11	67491769	67505372	67491769	67505372	-	ENST00000356404.7@PITPNM1	ENST00000356404.7	protein_coding	67505188,67504103,67502504,67502292,67501862,67500095,67499914,67499723,67498940,67498596,67498133,67497917,67497522,67497231,67496178,67495438,67495077,67494846,67494244,67493922,67493688,67493410,67492934,67491769	67505372,67504221,67502718,67502413,67502086,67500421,67500009,67499830,67499001,67498846,67498322,67498024,67497679,67497436,67496348,67495602,67495225,67494956,67494360,67494070,67493837,67493593,67493062,67492296	Gene ID= ENSG00000110697.12 TPM= 12.55 Transcript Type= protein_coding
chr11	67506497	67508631	67506497	67508631	-	ENST00000301488.7@CDK2AP2	ENST00000301488.7	protein_coding	67508001,67507592,67507365,67506497	67508631,67507689,67507497,67507012	Gene ID= ENSG00000167797.7 TPM= 38.13 Transcript Type= protein_coding
chr11	67506512	67508649	67506512	67508649	-	ENST00000525402.5@CDK2AP2	ENST00000525402.5	protein_coding	67507592,67507365,67506512	67508649,67507497,67507012	Gene ID= ENSG00000167797.7 TPM= 9.17 Transcript Type= retained_intron
chr11	67583838	67586660	67583838	67586660	+	transcript3837.chr11.nic@GSTP1	transcript3837.chr11.nic	protein_coding	67583838,67584464,67584685,67585138,67586104,67586389	67584169,67584570,67584772,67585241,67586211,67586660	Gene ID= ENSG00000084207.15 TPM= 80.6 Transcript Type= NA
chr11	67606852	67612506	67606852	67612506	+	ENST00000322776.10@NDUFV1	ENST00000322776.10	protein_coding	67606852,67608396,67608552,67609452,67610381,67610995,67611403,67611897,67612120,67612372	67607076,67608478,67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612506	Gene ID= ENSG00000167792.11 TPM= 5.47 Transcript Type= protein_coding
chr11	67606940	67612528	67606940	67612528	+	ENST00000529927.5@NDUFV1	ENST00000529927.5	protein_coding	67606940,67608396,67608552,67609452,67610381,67610995,67611403,67611897,67612120,67612372	67607049,67608478,67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612528	Gene ID= ENSG00000167792.11 TPM= 20.59 Transcript Type= protein_coding
chr11	67606944	67612535	67606944	67612535	+	ENST00000415352.6@NDUFV1	ENST00000415352.6	protein_coding	67606944,67608396,67608552,67609452,67610381,67610995,67611403,67611897,67612120,67612372	67607055,67608478,67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612535	Gene ID= ENSG00000167792.11 TPM= 130.15 Transcript Type= protein_coding
chr11	67611006	67612535	67611006	67612535	+	ENST00000527355.5@NDUFV1	ENST00000527355.5	protein_coding	67611006,67611403,67612120,67612372	67611207,67611569,67612265,67612535	Gene ID= ENSG00000167792.11 TPM= 12.71 Transcript Type= nonsense_mediated_decay
chr11	67606916	67608236	67606916	67608236	+	transcript3858.chr11.nnic@NA	transcript3858.chr11.nnic	NA	67606916	67608236	Gene ID= novel_gene_chr11_3859 TPM= 12.55 Transcript Type= NA
chr11	67627939	67629921	67627939	67629921	-	ENST00000376693.2@NUDT8	ENST00000376693.2	protein_coding	67629718,67628919,67628323,67627939	67629921,67629051,67628400,67628251	Gene ID= ENSG00000167799.9 TPM= 24.13 Transcript Type= protein_coding
chr11	67627938	67629930	67627938	67629930	-	ENST00000301490.8@NUDT8	ENST00000301490.8	protein_coding	67629718,67628919,67627938	67629930,67629051,67628400	Gene ID= ENSG00000167799.9 TPM= 4.83 Transcript Type= protein_coding
chr11	67991104	68004123	67991104	68004123	-	ENST00000227471.6@UNC93B1	ENST00000227471.6	protein_coding	68003948,68003657,68003022,67999519,67999173,67998359,67997675,67996602,67995611,67993676,67991104	68004123,68003798,68003175,67999680,67999305,67998452,67997799,67996784,67995884,67993794,67991857	Gene ID= ENSG00000110057.7 TPM= 14.48 Transcript Type= protein_coding
chr11	68030627	68036644	68030627	68036644	+	ENST00000313468.9@NDUFS8	ENST00000313468.9	protein_coding	68030627,68032152,68032286,68032923,68033111,68036253,68036462	68030733,68032209,68032336,68033012,68033283,68036381,68036644	Gene ID= ENSG00000110717.12 TPM= 252.67 Transcript Type= protein_coding
chr11	68030724	68036644	68030724	68036644	+	transcript3873.chr11.nic@NDUFS8	transcript3873.chr11.nic	protein_coding	68030724,68032152,68032286,68032923,68033111,68036253,68036462	68030961,68032209,68032336,68033012,68033283,68036381,68036644	Gene ID= ENSG00000110717.12 TPM= 32.58 Transcript Type= NA
chr11	68039016	68050895	68039016	68050895	+	ENST00000265686.7@TCIRG1	ENST00000265686.7	protein_coding	68039016,68041268,68041753,68042643,68042946,68043371,68043571,68043814,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049663,68049962,68050137,68050487,68050741	68039119,68041388,68041831,68042863,68043031,68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049294,68049788,68050066,68050254,68050664,68050895	Gene ID= ENSG00000110719.9 TPM= 13.51 Transcript Type= protein_coding
chr11	68045558	68046880	68045558	68046880	-	transcript3893.chr11.nnic@NA	transcript3893.chr11.nnic	NA	68045558	68046880	Gene ID= novel_gene_chr11_3894 TPM= 3.86 Transcript Type= NA
chr11	68156708	68213805	68156708	68213805	-	transcript3903.chr11.nic@KMT5B	transcript3903.chr11.nic	protein_coding	68213477,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68156708	68213805,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68159171	Gene ID= ENSG00000110066.14 TPM= 2.9 Transcript Type= NA
chr11	68157093	68213851	68157093	68213851	-	transcript3911.chr11.nic@KMT5B	transcript3911.chr11.nic	protein_coding	68213477,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68157093	68213851,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68159171	Gene ID= ENSG00000110066.14 TPM= 1.93 Transcript Type= NA
chr11	68157093	68213654	68157093	68213654	-	transcript3912.chr11.nnic@KMT5B	transcript3912.chr11.nnic	protein_coding	68213477,68189917,68185781,68180132,68175018,68173804,68171232,68171015,68166982,68157093	68213654,68190152,68185928,68180200,68175183,68173913,68171251,68171151,68167178,68159171	Gene ID= ENSG00000110066.14 TPM= 1.93 Transcript Type= NA
chr11	68165715	68213828	68165715	68213828	-	ENST00000405515.5@KMT5B	ENST00000405515.5	protein_coding	68213477,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68165715	68213828,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178	Gene ID= ENSG00000110066.14 TPM= 13.03 Transcript Type= protein_coding
chr11	68165715	68213286	68165715	68213286	-	ENST00000401547.6@KMT5B	ENST00000401547.6	protein_coding	68213138,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68165715	68213286,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178	Gene ID= ENSG00000110066.14 TPM= 3.38 Transcript Type= protein_coding
chr11	68165719	68213595	68165719	68213595	-	ENST00000402789.5@KMT5B	ENST00000402789.5	protein_coding	68213477,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68165719	68213595,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68165948	Gene ID= ENSG00000110066.14 TPM= 4.83 Transcript Type= protein_coding
chr11	68261335	68271976	68261335	68271976	-	transcript3925.chr11.nic@C11orf24	transcript3925.chr11.nic	protein_coding	68271857,68268054,68263692,68262731,68261335	68271976,68268251,68263866,68262918,68261725	Gene ID= ENSG00000171067.10 TPM= 1.93 Transcript Type= NA
chr11	68267101	68271988	68267101	68271988	-	transcript3934.chr11.nnic@C11orf24	transcript3934.chr11.nnic	protein_coding	68271857,68270838,68268054,68267101	68271988,68270944,68268251,68267397	Gene ID= ENSG00000171067.10 TPM= 1.93 Transcript Type= NA
chr11	68261335	68271962	68261335	68271962	-	ENST00000304271.10@C11orf24	ENST00000304271.10	protein_coding	68271857,68268054,68263692,68261335	68271962,68268251,68263866,68262918	Gene ID= ENSG00000171067.10 TPM= 8.69 Transcript Type= protein_coding
chr11	68312609	68449275	68312609	68449275	+	ENST00000294304.11@LRP5	ENST00000294304.11	protein_coding	68312609,68347847,68357650,68363747,68365571,68386316,68389881,68403483,68406524,68409914,68411436,68413689,68416328,68423489,68425102,68425978,68429575,68433602,68436889,68438446,68439777,68446436,68448809	68312805,68348243,68357847,68363943,68365702,68386712,68390052,68403699,68406813,68410140,68411620,68414012,68416527,68423697,68425292,68426187,68429700,68433838,68436999,68438682,68439916,68446533,68449275	Gene ID= ENSG00000162337.11 TPM= 9.65 Transcript Type= protein_coding
chr11	68460712	68614592	68460712	68614592	+	transcript3947.chr11.nic@PPP6R3	transcript3947.chr11.nic	protein_coding	68460712,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68569748,68571040,68574109,68575958,68583043,68587927,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613066	68460827,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68569897,68571104,68574224,68576043,68583129,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68614592	Gene ID= ENSG00000110075.14 TPM= 6.27 Transcript Type= NA
chr11	68460712	68556562	68460712	68556562	+	transcript3956.chr11.nic@PPP6R3	transcript3956.chr11.nic	protein_coding	68460712,68519501,68537659,68544838,68548067,68551121,68554145	68460827,68519651,68537891,68545024,68548204,68551186,68556562	Gene ID= ENSG00000110075.14 TPM= 4.34 Transcript Type= NA
chr11	68460731	68615334	68460731	68615334	+	ENST00000393800.6@PPP6R3	ENST00000393800.6	protein_coding	68460731,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68567014,68569748,68571040,68574109,68575958,68583043,68587927,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613066	68460827,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68567166,68569897,68571104,68574224,68576043,68583129,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68615334	Gene ID= ENSG00000110075.14 TPM= 14.48 Transcript Type= protein_coding
chr11	68606480	68610542	68606480	68610542	-	transcript3958.chr11.nnic@NA	transcript3958.chr11.nnic	NA	68606480	68610542	Gene ID= novel_gene_chr11_3959 TPM= 2.9 Transcript Type= NA
chr11	68754885	68841838	68754885	68841838	-	transcript3960.chr11.nnic@CPT1A	transcript3960.chr11.nnic	protein_coding	68841775,68815334,68812437,68807467,68804000,68799218,68796856,68794804,68793315,68784815,68781771,68780640,68775316,68773265,68762627,68761535,68760225,68759569,68756098,68754885	68841838,68815487,68812576,68807638,68804101,68799355,68796933,68794911,68793402,68785010,68781959,68780745,68775432,68773429,68762761,68761687,68760338,68759661,68757730,68755460	Gene ID= ENSG00000110090.12 TPM= 3.86 Transcript Type= NA
chr11	68891276	68903820	68891276	68903820	-	ENST00000362034.6@MRPL21	ENST00000362034.6	protein_coding	68903723,68900548,68897927,68896515,68893403,68892890,68891276	68903820,68900605,68898012,68896678,68893455,68892993,68891395	Gene ID= ENSG00000197345.12 TPM= 105.7 Transcript Type= protein_coding
chr11	68891276	68903786	68891276	68903786	-	ENST00000450904.6@MRPL21	ENST00000450904.6	protein_coding	68903723,68900535,68897927,68896515,68893403,68892890,68891276	68903786,68900605,68898012,68896678,68893455,68892993,68891395	Gene ID= ENSG00000197345.12 TPM= 5.31 Transcript Type= protein_coding
chr11	68903842	68940599	68903842	68940599	+	ENST00000255078.7@IGHMBP2	ENST00000255078.7	protein_coding	68903842,68906069,68908145,68908534,68911440,68914823,68917736,68929183,68933299,68933795,68934464,68935299,68936237,68938182,68939534	68904038,68906238,68908337,68908631,68911603,68915023,68917883,68929357,68933481,68933913,68934558,68935422,68937091,68938354,68940599	Gene ID= ENSG00000132740.8 TPM= 21.24 Transcript Type= protein_coding
chr11	68903878	68930517	68903878	68930517	+	transcript3983.chr11.nnic@IGHMBP2	transcript3983.chr11.nnic	protein_coding	68903878,68906069,68908145,68908534,68911440,68914823,68917736,68929183,68929734	68904038,68906238,68908337,68908631,68911603,68915023,68917883,68929357,68930517	Gene ID= ENSG00000132740.8 TPM= 5.31 Transcript Type= NA
chr11	68903878	68930516	68903878	68930516	+	transcript3984.chr11.nic@IGHMBP2	transcript3984.chr11.nic	protein_coding	68903878,68906069,68908145,68908534,68911440,68914823,68917736,68929183	68904038,68906238,68908337,68908631,68911603,68915023,68917883,68930516	Gene ID= ENSG00000132740.8 TPM= 4.34 Transcript Type= NA
chr11	69004398	69013409	69004398	69013409	-	ENST00000309099.6@MRGPRF	ENST00000309099.6	protein_coding	69013083,69009854,69004398	69013409,69009957,69006261	Gene ID= ENSG00000172935.8 TPM= 4.83 Transcript Type= protein_coding
chr11	69048897	69088524	69048897	69088524	+	ENST00000294309.7@TPCN2	ENST00000294309.7	protein_coding	69048897,69054033,69054721,69055175,69057578,69062884,69063895,69067503,69070430,69071356,69071923,69072627,69072915,69078482,69078734,69078892,69079834,69081400,69083945,69085210,69085671,69085848,69086523,69087112,69087875	69049106,69054097,69054797,69055352,69057694,69062990,69063967,69067605,69070495,69071420,69072023,69072708,69073001,69078601,69078793,69079020,69079883,69081499,69084016,69085286,69085752,69085930,69086604,69087206,69088524	Gene ID= ENSG00000162341.16 TPM= 1.93 Transcript Type= protein_coding
chr11	69083007	69088524	69083007	69088524	+	transcript4000.chr11.nnic@TPCN2	transcript4000.chr11.nnic	protein_coding	69083007,69084681,69085210,69085671,69085848,69086523,69087112,69087875	69084016,69084854,69085286,69085752,69085930,69086604,69087206,69088524	Gene ID= ENSG00000162341.16 TPM= 1.93 Transcript Type= NA
chr11	69641087	69654474	69641087	69654474	+	ENST00000227507.2@CCND1	ENST00000227507.2	protein_coding	69641087,69643031,69643832,69647994,69651118	69641511,69643246,69643991,69648142,69654474	Gene ID= ENSG00000110092.3 TPM= 3.86 Transcript Type= protein_coding
chr11	69665563	69675347	69665563	69675347	-	ENST00000279147.8@ORAOV1	ENST00000279147.8	protein_coding	69675190,69673216,69671749,69667895,69665563	69675347,69673321,69671819,69668012,69667587	Gene ID= ENSG00000149716.12 TPM= 16.41 Transcript Type= protein_coding
chr11	70078302	70189528	70078302	70189528	+	ENST00000355303.9@ANO1	ENST00000355303.9	protein_coding	70078302,70087752,70103066,70103999,70105734,70108353,70111707,70116458,70124350,70126061,70131919,70149710,70152450,70153057,70155911,70156947,70161161,70161622,70163283,70165470,70167242,70170887,70180004,70182502,70185590,70187738	70078714,70088084,70103164,70104150,70105788,70108404,70111762,70116499,70124414,70126195,70132079,70149792,70152461,70153128,70155988,70157021,70161362,70161733,70163340,70165570,70167387,70171039,70180056,70182686,70185695,70189528	Gene ID= ENSG00000131620.17 TPM= 4.83 Transcript Type= protein_coding
chr11	70078349	70189037	70078349	70189037	+	transcript4014.chr11.nic@ANO1	transcript4014.chr11.nic	protein_coding	70078349,70087752,70103066,70103999,70105734,70108353,70111126,70111707,70116458,70124350,70126061,70131919,70149710,70153057,70156947,70161161,70161622,70163283,70165470,70167242,70170887,70180004,70182502,70185590,70187738	70078714,70088084,70103164,70104150,70105788,70108404,70111191,70111762,70116499,70124414,70126195,70132079,70149792,70153128,70157021,70161362,70161733,70163340,70165570,70167387,70171039,70180056,70182686,70185695,70189037	Gene ID= ENSG00000131620.17 TPM= 1.93 Transcript Type= NA
chr11	70078349	70189528	70078349	70189528	+	transcript4017.chr11.nic@ANO1	transcript4017.chr11.nic	protein_coding	70078349,70087752,70103066,70103999,70105734,70108353,70111707,70116458,70124350,70126061,70131919,70149710,70153057,70156947,70161161,70161622,70163283,70165470,70167242,70170887,70180004,70182502,70185590,70187738	70078714,70088084,70103164,70104150,70105788,70108404,70111762,70116499,70124414,70126195,70132079,70149792,70153128,70157021,70161362,70161733,70163340,70165570,70167387,70171039,70180056,70182686,70185695,70189528	Gene ID= ENSG00000131620.17 TPM= 3.86 Transcript Type= NA
chr11	70203163	70207390	70203163	70207390	+	ENST00000301838.4@FADD	ENST00000301838.4	protein_coding	70203163,70206133	70203745,70207390	Gene ID= ENSG00000168040.4 TPM= 42.47 Transcript Type= protein_coding
chr11	70203296	70204836	70203296	70204836	+	transcript4021.chr11.nnic@NA	transcript4021.chr11.nnic	NA	70203296	70204836	Gene ID= novel_gene_chr11_4022 TPM= 2.9 Transcript Type= NA
chr11	70270682	70363359	70270682	70363359	+	transcript4029.chr11.nic@PPFIA1	transcript4029.chr11.nic	protein_coding	70270682,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70349923,70350994,70354301,70355639,70356161,70362095,70362288	70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70350039,70351023,70354452,70355811,70356254,70362176,70363359	Gene ID= ENSG00000131626.16 TPM= 1.93 Transcript Type= NA
chr11	70270682	70372534	70270682	70372534	+	transcript4030.chr11.nic@PPFIA1	transcript4030.chr11.nic	protein_coding	70270682,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70354301,70355639,70356161,70362095,70362288,70372215,70372477	70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70354452,70355811,70356254,70362176,70362488,70372390,70372534	Gene ID= ENSG00000131626.16 TPM= 1.93 Transcript Type= NA
chr11	70270682	70349157	70270682	70349157	+	transcript4033.chr11.nic@PPFIA1	transcript4033.chr11.nic	protein_coding	70270682,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189	70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70349157	Gene ID= ENSG00000131626.16 TPM= 3.38 Transcript Type= NA
chr11	70398506	70436575	70398506	70436575	+	ENST00000301843.12@CTTN	ENST00000301843.12	protein_coding	70398506,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70421470,70422940,70425332,70429051,70431191,70433101,70433647,70435026	70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70421580,70422995,70425401,70429199,70431280,70433278,70433718,70436575	Gene ID= ENSG00000085733.15 TPM= 51.16 Transcript Type= protein_coding
chr11	70398404	70436584	70398404	70436584	+	ENST00000346329.7@CTTN	ENST00000346329.7	protein_coding	70398404,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70422940,70425332,70429051,70431191,70433101,70433647,70435026	70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70422995,70425401,70429199,70431280,70433278,70433718,70436584	Gene ID= ENSG00000085733.15 TPM= 74.33 Transcript Type= protein_coding
chr11	70398510	70412521	70398510	70412521	+	transcript4051.chr11.nic@CTTN	transcript4051.chr11.nic	protein_coding	70398510,70405265,70407298,70407518,70409831	70398614,70405361,70407384,70407591,70412521	Gene ID= ENSG00000085733.15 TPM= 4.83 Transcript Type= NA
chr11	71434414	71448435	71434414	71448435	-	ENST00000355527.7@DHCR7	ENST00000355527.7	protein_coding	71448290,71447610,71444855,71443993,71442263,71441227,71438879,71437812,71434414	71448435,71447734,71444958,71444215,71442353,71441440,71439083,71437943,71435839	Gene ID= ENSG00000172893.15 TPM= 11.58 Transcript Type= protein_coding
chr11	71448674	71452157	71448674	71452157	+	ENST00000529369.1@AP002387.1	ENST00000529369.1	antisense_RNA	71448674,71451690	71448885,71452157	Gene ID= ENSG00000254682.1 TPM= 4.83 Transcript Type= antisense_RNA
chr11	71787515	71801234	71787515	71801234	+	transcript4066.chr11.nic@FAM86C1	transcript4066.chr11.nic	protein_coding	71787515,71789783,71791736,71793380,71796017,71799561	71787632,71789845,71791819,71793481,71796166,71801234	Gene ID= ENSG00000158483.15 TPM= 2.9 Transcript Type= NA
chr11	71928701	71997595	71928701	71997595	+	ENST00000361756.7@RNF121	ENST00000361756.7	protein_coding	71928701,71957227,71960750,71982761,71987004,71990597,71994719,71995450,71996195	71929124,71957264,71960891,71982915,71987111,71990717,71994852,71995551,71997595	Gene ID= ENSG00000137522.17 TPM= 11.58 Transcript Type= protein_coding
chr11	72002864	72041137	72002864	72041137	-	transcript4077.chr11.nnic@NUMA1	transcript4077.chr11.nnic	protein_coding	72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72016210,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72041137,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72014715,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 14.24 Transcript Type= NA
chr11	72002864	72041137	72002864	72041137	-	transcript4080.chr11.nic@NUMA1	transcript4080.chr11.nic	protein_coding	72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72041137,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 26.06 Transcript Type= NA
chr11	72002864	72041964	72002864	72041964	-	transcript4081.chr11.nic@NUMA1	transcript4081.chr11.nic	protein_coding	72041823,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72041964,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 20.27 Transcript Type= NA
chr11	72014948	72041137	72014948	72041137	-	ENST00000542977.5@NUMA1	ENST00000542977.5	protein_coding	72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72014948	72041137,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260	Gene ID= ENSG00000137497.17 TPM= 5.07 Transcript Type= protein_coding
chr11	72002864	72080687	72002864	72080687	-	ENST00000393695.7@NUMA1	ENST00000393695.7	protein_coding	72080458,72069842,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72080687,72069911,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 53.09 Transcript Type= protein_coding
chr11	72097292	72103387	72097292	72103387	-	ENST00000278671.9@LAMTOR1	ENST00000278671.9	protein_coding	72103183,72099111,72098781,72098289,72097292	72103387,72099256,72098858,72098415,72097914	Gene ID= ENSG00000149357.9 TPM= 173.76 Transcript Type= protein_coding
chr11	72109587	72112780	72109587	72112780	-	ENST00000227618.8@ANAPC15	ENST00000227618.8	protein_coding	72112650,72111412,72111157,72110544,72110088,72109587	72112780,72111496,72111286,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 23.17 Transcript Type= protein_coding
chr11	72109589	72112774	72109589	72112774	-	ENST00000535234.5@ANAPC15	ENST00000535234.5	protein_coding	72112650,72111442,72111157,72110544,72110088,72109589	72112774,72111496,72111286,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 4.83 Transcript Type= protein_coding
chr11	72109590	72112769	72109590	72112769	-	ENST00000538393.5@ANAPC15	ENST00000538393.5	protein_coding	72112650,72111412,72111157,72110544,72110088,72109590	72112769,72111496,72111281,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 22.2 Transcript Type= protein_coding
chr11	72216763	72221945	72216763	72221945	+	ENST00000298223.10@FOLR2	ENST00000298223.10	protein_coding	72216763,72218561,72220870,72221176,72221470	72216925,72218734,72221058,72221311,72221945	Gene ID= ENSG00000165457.13 TPM= 5.79 Transcript Type= protein_coding
chr11	72226178	72229776	72226178	72229776	+	transcript4118.chr11.nic@INPPL1	transcript4118.chr11.nic	protein_coding	72226178,72228348,72228727,72229090,72229465,72229663	72228253,72228498,72228847,72229230,72229558,72229776	Gene ID= ENSG00000165458.13 TPM= 2.9 Transcript Type= NA
chr11	72224781	72239105	72224781	72239105	+	ENST00000298229.6@INPPL1	ENST00000298229.6	protein_coding	72224781,72228190,72228348,72228727,72229090,72229465,72229663,72229924,72230121,72230362,72230796,72230993,72231498,72232240,72232626,72232875,72233075,72233441,72233655,72234281,72234527,72235116,72235296,72235675,72235846,72237124,72238042,72238263	72225166,72228253,72228498,72228847,72229230,72229558,72229752,72230019,72230271,72230468,72230898,72231189,72231615,72232336,72232764,72232974,72233163,72233522,72233744,72234394,72234615,72235203,72235451,72235753,72235986,72237796,72238175,72239105	Gene ID= ENSG00000165458.13 TPM= 52.13 Transcript Type= protein_coding
chr11	72292425	72434648	72292425	72434648	-	ENST00000294053.7@CLPB	ENST00000294053.7	protein_coding	72434072,72430312,72402966,72380281,72372925,72358880,72329707,72317106,72308527,72307199,72302304,72301803,72295492,72294620,72294325,72294022,72292425	72434648,72430363,72403052,72380384,72373014,72359008,72329804,72317220,72308604,72307254,72302348,72301964,72295648,72294693,72294444,72294126,72293615	Gene ID= ENSG00000162129.12 TPM= 1.93 Transcript Type= protein_coding
chr11	72292446	72434597	72292446	72434597	-	ENST00000538039.5@CLPB	ENST00000538039.5	protein_coding	72434072,72430312,72402966,72380281,72358880,72329707,72317106,72308527,72307199,72302304,72301803,72295492,72294620,72294325,72294022,72292446	72434597,72430363,72403052,72380384,72359008,72329804,72317220,72308604,72307254,72302348,72301964,72295648,72294693,72294444,72294126,72293615	Gene ID= ENSG00000162129.12 TPM= 33.79 Transcript Type= protein_coding
chr11	72576142	72642460	72576142	72642460	-	ENST00000444035.6@PDE2A	ENST00000444035.6	protein_coding	72642254,72631078,72608662,72605138,72597510,72596593,72591297,72590427,72590192,72589907,72589751,72589175,72588784,72586070,72585554,72585371,72584872,72584551,72584201,72583438,72582444,72581877,72581357,72580886,72580577,72579534,72579284,72578897,72578476,72578233,72576142	72642460,72631139,72608751,72605226,72597619,72596648,72591356,72590580,72590244,72589981,72589792,72589240,72588914,72586181,72585593,72585434,72584944,72584728,72584313,72583515,72582566,72581947,72581479,72580973,72580624,72579608,72579383,72579009,72578514,72578339,72577594	Gene ID= ENSG00000186642.15 TPM= 14.48 Transcript Type= protein_coding
chr11	72685075	72722358	72685075	72722358	-	ENST00000334211.12@ARAP1	ENST00000334211.12	protein_coding	72721850,72714152,72713176,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72704152,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72692753,72688455,72687688,72687439,72686042,72685075	72722358,72714321,72713243,72712568,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72704334,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72692785,72688537,72687738,72687502,72686191,72685681	Gene ID= ENSG00000186635.14 TPM= 4.83 Transcript Type= protein_coding
chr11	72754729	72781919	72754729	72781919	-	transcript4143.chr11.nic@STARD10	transcript4143.chr11.nic	protein_coding	72781664,72781113,72759234,72758530,72757767,72755701,72754729	72781919,72781294,72759381,72758633,72757884,72755753,72755142	Gene ID= ENSG00000214530.8 TPM= 26.55 Transcript Type= NA
chr11	72754729	72781919	72754729	72781919	-	transcript4145.chr11.nic@STARD10	transcript4145.chr11.nic	protein_coding	72781664,72780975,72759234,72758530,72755701,72754729	72781919,72781294,72759381,72758633,72755753,72755142	Gene ID= ENSG00000214530.8 TPM= 11.1 Transcript Type= NA
chr11	72770150	72772330	72770150	72772330	-	transcript4148.chr11.nnic@NA	transcript4148.chr11.nnic	NA	72770150	72772330	Gene ID= novel_gene_chr11_4149 TPM= 1.93 Transcript Type= NA
chr11	72812429	72814065	72812429	72814065	-	transcript4150.chr11.nnic@NA	transcript4150.chr11.nnic	NA	72812429	72814065	Gene ID= novel_gene_chr11_4151 TPM= 1.93 Transcript Type= NA
chr11	72814308	72829635	72814308	72829635	+	ENST00000321297.9@ATG16L2	ENST00000321297.9	protein_coding	72814308,72816728,72817756,72821668,72822044,72822478,72822848,72824060,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72822961,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829635	Gene ID= ENSG00000168010.10 TPM= 2.9 Transcript Type= protein_coding
chr11	72814419	72829635	72814419	72829635	+	ENST00000439504.6@ATG16L2	ENST00000439504.6	protein_coding	72814419,72816728,72817756,72821668,72822044,72822478,72822848,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829635	Gene ID= ENSG00000168010.10 TPM= 1.93 Transcript Type= retained_intron
chr11	72836745	73142420	72836745	73142420	-	transcript4157.chr11.nic@FCHSD2	transcript4157.chr11.nic	protein_coding	73141857,73140031,73083695,73015809,73000990,72988964,72985062,72984088,72921828,72902543,72889829,72887470,72867865,72849755,72843449,72842621,72841454,72840877,72836745	73142420,73140128,73083740,73015885,73001134,72989097,72985116,72984216,72921950,72902638,72889945,72887574,72868026,72849889,72843532,72843328,72841583,72840959,72838874	Gene ID= ENSG00000137478.14 TPM= 7.72 Transcript Type= NA
chr11	73218282	73235932	73218282	73235932	+	transcript4178.chr11.nnic@P2RY2	transcript4178.chr11.nnic	protein_coding	73218282,73220507,73227981,73234156	73218656,73220619,73228175,73235932	Gene ID= ENSG00000175591.11 TPM= 5.79 Transcript Type= NA
chr11	73217332	73235932	73217332	73235932	+	transcript4183.chr11.nnic@P2RY2	transcript4183.chr11.nnic	protein_coding	73217332,73227981,73234156	73217709,73228175,73235932	Gene ID= ENSG00000175591.11 TPM= 7.72 Transcript Type= NA
chr11	73218281	73235932	73218281	73235932	+	transcript4191.chr11.nnic@P2RY2	transcript4191.chr11.nnic	protein_coding	73218281,73227981,73234156	73218504,73228175,73235932	Gene ID= ENSG00000175591.11 TPM= 15.44 Transcript Type= NA
chr11	73218298	73235932	73218298	73235932	+	ENST00000393597.6@P2RY2	ENST00000393597.6	protein_coding	73218298,73227981,73234156	73218432,73228175,73235932	Gene ID= ENSG00000175591.11 TPM= 66.61 Transcript Type= protein_coding
chr11	73218457	73235934	73218457	73235934	+	ENST00000393596.2@P2RY2	ENST00000393596.2	protein_coding	73218457,73227981,73234156	73218656,73228175,73235934	Gene ID= ENSG00000175591.11 TPM= 17.38 Transcript Type= protein_coding
chr11	73235787	73241217	73235787	73241217	+	transcript4198.chr11.nnic@NA	transcript4198.chr11.nnic	NA	73235787	73241217	Gene ID= novel_gene_chr11_4199 TPM= 30.89 Transcript Type= NA
chr11	73238975	73242335	73238975	73242335	+	ENST00000565433.1@AP002761.4	ENST00000565433.1	sense_overlapping	73238975	73242335	Gene ID= ENSG00000260401.1 TPM= 31.86 Transcript Type= sense_overlapping
chr11	73308289	73369091	73308289	73369091	+	ENST00000263674.3@ARHGEF17	ENST00000263674.3	protein_coding	73308289,73346883,73352830,73355533,73355861,73356175,73356709,73357025,73357242,73359834,73360320,73361088,73362040,73362433,73363206,73363747,73364172,73364452,73365390,73365678,73367584	73311830,73346960,73353012,73355649,73355953,73356351,73356759,73357134,73357327,73359952,73360533,73361161,73362239,73362734,73363455,73363833,73364239,73364600,73365564,73365947,73369091	Gene ID= ENSG00000110237.3 TPM= 23.17 Transcript Type= protein_coding
chr11	73376264	73397472	73376264	73397472	+	ENST00000064780.6@RELT	ENST00000064780.6	protein_coding	73376264,73389112,73390551,73390755,73391144,73392211,73393837,73394236,73394477,73395087,73395444	73376499,73389181,73390625,73390921,73391223,73392468,73393917,73394317,73394734,73395285,73397472	Gene ID= ENSG00000054967.12 TPM= 19.79 Transcript Type= protein_coding
chr11	73376668	73396640	73376668	73396640	+	ENST00000393580.2@RELT	ENST00000393580.2	protein_coding	73376668,73389112,73390551,73390755,73391144,73392211,73393837,73394236,73394477,73395087,73395444	73376869,73389181,73390625,73390921,73391223,73392468,73393917,73394317,73394734,73395285,73396640	Gene ID= ENSG00000054967.12 TPM= 39.1 Transcript Type= protein_coding
chr11	73400793	73403633	73400793	73403633	-	transcript4218.chr11.nnic@NA	transcript4218.chr11.nnic	NA	73400793	73403633	Gene ID= novel_gene_chr11_4219 TPM= 2.9 Transcript Type= NA
chr11	73647549	73662819	73647549	73662819	+	ENST00000227214.10@PLEKHB1	ENST00000227214.10	protein_coding	73647549,73649012,73650553,73651788,73652975,73660753,73661466	73647738,73649087,73650705,73651890,73653014,73660852,73662819	Gene ID= ENSG00000021300.13 TPM= 1.93 Transcript Type= protein_coding
chr11	73675896	73761091	73675896	73761091	-	ENST00000336083.7@RAB6A	ENST00000336083.7	protein_coding	73760566,73730765,73720846,73718613,73716251,73707420,73679654,73675896	73761091,73730823,73720899,73718718,73716362,73707513,73679720,73677962	Gene ID= ENSG00000175582.19 TPM= 38.61 Transcript Type= protein_coding
chr11	73787316	73864611	73787316	73864611	+	ENST00000310614.11@MRPL48	ENST00000310614.11	protein_coding	73787316,73805027,73808313,73825708,73844807,73859907,73863172,73864296	73787992,73805079,73808350,73825796,73844976,73860009,73863261,73864611	Gene ID= ENSG00000175581.13 TPM= 14.48 Transcript Type= protein_coding
chr11	73787909	73864602	73787909	73864602	+	ENST00000542303.5@MRPL48	ENST00000542303.5	protein_coding	73787909,73805027,73808313,73825708,73863172,73864296	73787992,73805079,73808350,73825796,73863261,73864602	Gene ID= ENSG00000175581.13 TPM= 1.93 Transcript Type= protein_coding
chr11	73872667	73876988	73872667	73876988	-	ENST00000355693.4@COA4	ENST00000355693.4	protein_coding	73876757,73872667	73876988,73873394	Gene ID= ENSG00000181924.6 TPM= 12.55 Transcript Type= protein_coding
chr11	73876969	73927725	73876969	73927725	+	transcript4247.chr11.nnic@PAAF1	transcript4247.chr11.nnic	protein_coding	73876969,73878779,73887040,73887354,73889172,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887099,73887457,73889245,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927725	Gene ID= ENSG00000175575.12 TPM= 5.79 Transcript Type= NA
chr11	73876969	73931124	73876969	73931124	+	ENST00000310571.7@PAAF1	ENST00000310571.7	protein_coding	73876969,73878779,73887354,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887457,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73931124	Gene ID= ENSG00000175575.12 TPM= 6.76 Transcript Type= protein_coding
chr11	73974667	73983307	73974667	73983307	-	ENST00000310473.7@UCP2	ENST00000310473.7	protein_coding	73982721,73981476,73978253,73977886,73976823,73976641,73975491,73974667	73983307,73981632,73978477,73978096,73977017,73976742,73975671,73975121	Gene ID= ENSG00000175567.8 TPM= 57.92 Transcript Type= protein_coding
chr11	74000162	74003771	74000162	74003771	+	transcript4270.chr11.nnic@NA	transcript4270.chr11.nnic	NA	74000162	74003771	Gene ID= novel_gene_chr11_4271 TPM= 7.72 Transcript Type= NA
chr11	74000281	74009435	74000281	74009435	-	ENST00000314032.8@UCP3	ENST00000314032.8	protein_coding	74008978,74006917,74006169,74005730,74004484,74003827,74000281	74009435,74007137,74006379,74005933,74004585,74004007,74001526	Gene ID= ENSG00000175564.12 TPM= 33.79 Transcript Type= protein_coding
chr11	74171099	74254703	74171099	74254703	+	ENST00000328257.12@PPME1	ENST00000328257.12	protein_coding	74171099,74203728,74204353,74222312,74225205,74230245,74230912,74235901,74239133,74246076,74247079,74250954,74251648,74253492	74171522,74203821,74204445,74222369,74225256,74230399,74231002,74235966,74239256,74246205,74247123,74251018,74251715,74254703	Gene ID= ENSG00000214517.9 TPM= 74.33 Transcript Type= protein_coding
chr11	74330318	74398473	74330318	74398473	-	ENST00000298198.4@PGM2L1	ENST00000298198.4	protein_coding	74398051,74374415,74371711,74370902,74368492,74351383,74347148,74346732,74345469,74343323,74342885,74342461,74338468,74330318	74398473,74374582,74371817,74370986,74368575,74351576,74347337,74346829,74345649,74343416,74343014,74342650,74338601,74336754	Gene ID= ENSG00000165434.7 TPM= 13.51 Transcript Type= protein_coding
chr11	74491843	74493733	74491843	74493733	-	ENST00000310109.4@LIPT2	ENST00000310109.4	protein_coding	74493238,74491843	74493733,74492364	Gene ID= ENSG00000175536.6 TPM= 3.86 Transcript Type= protein_coding
chr11	74592530	74643057	74592530	74643057	+	ENST00000263681.6@POLD3	ENST00000263681.6	protein_coding	74592530,74594061,74604692,74611499,74612878,74618537,74620017,74625408,74629217,74634583,74636197,74640564	74592718,74594116,74604794,74611538,74613010,74618804,74620089,74625573,74629323,74634695,74636275,74643057	Gene ID= ENSG00000077514.8 TPM= 3.86 Transcript Type= protein_coding
chr11	74592598	74669341	74592598	74669341	+	transcript4298.chr11.nic@POLD3	transcript4298.chr11.nic	protein_coding	74592598,74594061,74604692,74611499,74612878,74618537,74620017,74625408,74629217,74634583,74636197,74668777	74592718,74594116,74604794,74611538,74613010,74618804,74620089,74625573,74629323,74634695,74636275,74669341	Gene ID= ENSG00000077514.8 TPM= 1.93 Transcript Type= NA
chr11	74696429	74731175	74696429	74731175	-	ENST00000263671.9@CHRDL2	ENST00000263671.9	protein_coding	74730807,74718720,74713386,74710849,74708302,74706487,74704486,74703305,74702794,74701592,74697205,74696429	74731175,74718832,74713479,74710991,74708395,74706542,74704654,74703499,74702967,74701646,74697297,74696585	Gene ID= ENSG00000054938.15 TPM= 1.93 Transcript Type= protein_coding
chr11	74949247	74979031	74949247	74979031	+	ENST00000263672.10@SPCS2	ENST00000263672.10	protein_coding	74949247,74965034,74965763,74969565,74976857	74949399,74965117,74965923,74969699,74979031	Gene ID= ENSG00000118363.11 TPM= 7.72 Transcript Type= protein_coding
chr11	74988134	75010907	74988134	75010907	+	ENST00000294064.8@NEU3	ENST00000294064.8	protein_coding	74988134,74994509,75005413	74989154,74994720,75010907	Gene ID= ENSG00000162139.9 TPM= 9.65 Transcript Type= protein_coding
chr11	75260121	75264048	75260121	75264048	-	transcript4323.chr11.nnic@NA	transcript4323.chr11.nnic	NA	75260121	75264048	Gene ID= novel_gene_chr11_4324 TPM= 2.9 Transcript Type= NA
chr11	75399486	75406913	75399486	75406913	+	ENST00000531188.5@RPS3	ENST00000531188.5	protein_coding	75399486,75400694,75401640,75402352,75404020,75404672,75405614	75399577,75400824,75401733,75402446,75404207,75404868,75406913	Gene ID= ENSG00000149273.14 TPM= 676.2 Transcript Type= protein_coding
chr11	75399520	75405884	75399520	75405884	+	ENST00000422465.6@RPS3	ENST00000422465.6	protein_coding	75399520,75401640,75402352,75404020,75404672,75405614	75399577,75401733,75402446,75404207,75404868,75405884	Gene ID= ENSG00000149273.14 TPM= 3.86 Transcript Type= protein_coding
chr11	75399531	75422280	75399531	75422280	+	ENST00000527446.5@RPS3	ENST00000527446.5	protein_coding	75399531,75400694,75401640,75402352,75404020,75404672,75421727	75399577,75400824,75401733,75402446,75404207,75404868,75422280	Gene ID= ENSG00000149273.14 TPM= 7.72 Transcript Type= protein_coding
chr11	75399519	75405692	75399519	75405692	+	ENST00000530721.5@RPS3	ENST00000530721.5	protein_coding	75399519,75400694,75401640,75402352,75404020,75404672,75405614	75399577,75400777,75401733,75402446,75404207,75404868,75405692	Gene ID= ENSG00000149273.14 TPM= 21.56 Transcript Type= nonsense_mediated_decay
chr11	75399530	75405692	75399530	75405692	+	ENST00000532872.5@RPS3	ENST00000532872.5	protein_coding	75399530,75400694,75401640,75404020,75404672,75405614	75399577,75400824,75401733,75404207,75404868,75405692	Gene ID= ENSG00000149273.14 TPM= 8.04 Transcript Type= nonsense_mediated_decay
chr11	75422396	75430629	75422396	75430629	-	ENST00000539798.1@KLHL35	ENST00000539798.1	protein_coding	75429749,75428442,75426520,75425393,75423692,75422396	75430629,75428626,75426638,75425581,75423880,75422768	Gene ID= ENSG00000149243.15 TPM= 5.79 Transcript Type= protein_coding
chr11	75434640	75525984	75434640	75525984	-	transcript4339.chr11.nic@GDPD5	transcript4339.chr11.nic	protein_coding	75525210,75490237,75479244,75477619,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75439340,75436936,75434640	75525984,75490320,75479488,75477795,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75439354,75437048,75435655	Gene ID= ENSG00000158555.14 TPM= 6.27 Transcript Type= NA
chr11	75434640	75525915	75434640	75525915	-	transcript4340.chr11.nic@GDPD5	transcript4340.chr11.nic	protein_coding	75525210,75490237,75477619,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75439340,75436936,75434640	75525915,75490320,75477795,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75439354,75437048,75435655	Gene ID= ENSG00000158555.14 TPM= 6.27 Transcript Type= NA
chr11	75489741	75525908	75489741	75525908	-	transcript4343.chr11.nic@GDPD5	transcript4343.chr11.nic	protein_coding	75525210,75489741	75525908,75490320	Gene ID= ENSG00000158555.14 TPM= 1.93 Transcript Type= NA
chr11	75434640	75525903	75434640	75525903	-	ENST00000336898.7@GDPD5	ENST00000336898.7	protein_coding	75525210,75490237,75477619,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75436936,75434640	75525903,75490320,75477795,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75437048,75435655	Gene ID= ENSG00000158555.14 TPM= 3.38 Transcript Type= protein_coding
chr11	75562056	75572783	75562056	75572783	+	ENST00000533603.5@SERPINH1	ENST00000533603.5	protein_coding	75562056,75563727,75566316,75568731,75568939,75571781	75562319,75563770,75566971,75568829,75569171,75572783	Gene ID= ENSG00000149257.13 TPM= 6.27 Transcript Type= protein_coding
chr11	75562086	75572783	75562086	75572783	+	ENST00000358171.7@SERPINH1	ENST00000358171.7	protein_coding	75562086,75566316,75568731,75568939,75571781	75562319,75566971,75568829,75569171,75572783	Gene ID= ENSG00000149257.13 TPM= 10.14 Transcript Type= protein_coding
chr11	75667554	75669387	75667554	75669387	+	transcript4350.chr11.nnic@NA	transcript4350.chr11.nnic	NA	75667554	75669387	Gene ID= novel_gene_chr11_4351 TPM= 1.93 Transcript Type= NA
chr11	75768732	75801534	75768732	75801534	+	ENST00000228027.11@DGAT2	ENST00000228027.11	protein_coding	75768732,75784618,75790188,75790661,75796328,75797158,75798227,75800354	75769112,75784746,75790295,75790731,75796532,75797332,75798429,75801534	Gene ID= ENSG00000062282.14 TPM= 14.48 Transcript Type= protein_coding
chr11	75815167	76143195	75815167	76143195	+	ENST00000356136.7@UVRAG	ENST00000356136.7	protein_coding	75815167,75851883,75861746,75879879,75888829,75911954,75961444,75983387,76004005,76007534,76008807,76016815,76065710,76115924,76140711	75815524,75852000,75861780,75880040,75888903,75912039,75961549,75983513,76004089,76007621,76008867,76016980,76065788,76116015,76143195	Gene ID= ENSG00000198382.8 TPM= 34.75 Transcript Type= protein_coding
chr11	76186396	76210775	76186396	76210775	-	transcript4373.chr11.nnic@WNT11	transcript4373.chr11.nnic	protein_coding	76210472,76206325,76196483,76194567,76191564,76186396	76210775,76206498,76196718,76194844,76191856,76187239	Gene ID= ENSG00000085741.12 TPM= 2.9 Transcript Type= NA
chr11	76209058	76211532	76209058	76211532	+	transcript4375.chr11.nnic@NA	transcript4375.chr11.nnic	NA	76209058	76211532	Gene ID= novel_gene_chr11_4376 TPM= 4.83 Transcript Type= NA
chr11	76349956	76381039	76349956	76381039	-	transcript4391.chr11.nnic@THAP12	transcript4391.chr11.nnic	protein_coding	76380748,76365780,76360956,76355618,76349956	76381039,76365972,76361063,76355654,76352794	Gene ID= ENSG00000137492.7 TPM= 3.86 Transcript Type= NA
chr11	76349956	76380942	76349956	76380942	-	ENST00000260045.7@THAP12	ENST00000260045.7	protein_coding	76380748,76365852,76360956,76355618,76349956	76380942,76365972,76361063,76355654,76352794	Gene ID= ENSG00000137492.7 TPM= 111.98 Transcript Type= protein_coding
chr11	76657527	76670747	76657527	76670747	-	ENST00000404995.5@LRRC32	ENST00000404995.5	protein_coding	76670614,76665871,76659583,76657527	76670747,76665958,76661508,76658034	Gene ID= ENSG00000137507.11 TPM= 4.83 Transcript Type= protein_coding
chr11	76657524	76670747	76657524	76670747	-	ENST00000260061.9@LRRC32	ENST00000260061.9	protein_coding	76670614,76665871,76657524	76670747,76665958,76661508	Gene ID= ENSG00000137507.11 TPM= 6.76 Transcript Type= protein_coding
chr11	76783239	76798154	76783239	76798154	+	ENST00000333090.4@TSKU	ENST00000333090.4	protein_coding	76783239,76795609	76783404,76798154	Gene ID= ENSG00000182704.7 TPM= 42.47 Transcript Type= protein_coding
chr11	76860873	77026797	76860873	77026797	+	ENST00000532485.5@ACER3	ENST00000532485.5	protein_coding	76860873,76926557,76958979,76976289,76985643,76990539,76998763,77015016,77016675,77019731,77020274	76861079,76926667,76959031,76976341,76985724,76990574,76998821,77015117,77016779,77019776,77026797	Gene ID= ENSG00000078124.11 TPM= 1.93 Transcript Type= protein_coding
chr11	76860902	76869045	76860902	76869045	+	transcript4415.chr11.nic@ACER3	transcript4415.chr11.nic	protein_coding	76860902,76868120	76861079,76869045	Gene ID= ENSG00000078124.11 TPM= 1.93 Transcript Type= NA
chr11	77322022	77412027	77322022	77412027	-	transcript4423.chr11.nic@PAK1	transcript4423.chr11.nic	protein_coding	77411774,77397027,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77322022	77412027,77397093,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77323360	Gene ID= ENSG00000149269.9 TPM= 1.93 Transcript Type= NA
chr11	77322032	77411983	77322032	77411983	-	transcript4424.chr11.nic@PAK1	transcript4424.chr11.nic	protein_coding	77411774,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77325328,77322032	77411983,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77325376,77323360	Gene ID= ENSG00000149269.9 TPM= 1.93 Transcript Type= NA
chr11	77322022	77411983	77322022	77411983	-	transcript4428.chr11.nic@PAK1	transcript4428.chr11.nic	protein_coding	77411774,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77322022	77411983,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77323360	Gene ID= ENSG00000149269.9 TPM= 38.61 Transcript Type= NA
chr11	77321707	77474062	77321707	77474062	-	ENST00000356341.7@PAK1	ENST00000356341.7	protein_coding	77473552,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77321707	77474062,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77323360	Gene ID= ENSG00000149269.9 TPM= 7.72 Transcript Type= protein_coding
chr11	77322022	77411983	77322022	77411983	-	transcript4435.chr11.nic@PAK1	transcript4435.chr11.nic	protein_coding	77411774,77392331,77379894,77379241,77374328,77358898,77349239,77343819,77340646,77337324,77336086,77332730,77322022	77411983,77392541,77379994,77379388,77374365,77359017,77349287,77343931,77340763,77337423,77336282,77332867,77323360	Gene ID= ENSG00000149269.9 TPM= 1.93 Transcript Type= NA
chr11	77614530	77637805	77614530	77637805	-	ENST00000525428.5@CLNS1A	ENST00000525428.5	protein_coding	77637590,77629763,77625717,77624963,77622500,77619606,77614530	77637805,77629899,77625818,77625070,77622673,77619695,77616695	Gene ID= ENSG00000074201.8 TPM= 58.88 Transcript Type= protein_coding
chr11	77616195	77637772	77616195	77637772	-	ENST00000525064.5@CLNS1A	ENST00000525064.5	protein_coding	77637590,77629763,77625717,77624963,77619606,77616195	77637772,77629899,77625818,77625070,77619695,77616695	Gene ID= ENSG00000074201.8 TPM= 2.9 Transcript Type= protein_coding
chr11	77659996	77821017	77659996	77821017	-	ENST00000308488.10@RSF1	ENST00000308488.10	protein_coding	77820528,77764598,77747036,77740731,77725545,77700721,77698487,77693507,77691159,77685105,77683710,77678086,77676792,77675036,77672042,77659996	77821017,77764689,77747128,77740936,77725699,77702495,77698693,77693611,77691238,77685159,77683819,77678153,77676999,77675256,77672230,77667491	Gene ID= ENSG00000048649.13 TPM= 2.9 Transcript Type= protein_coding
chr11	77821113	77872352	77821113	77872352	+	transcript4456.chr11.nic@AAMDC	transcript4456.chr11.nic	protein_coding	77821113,77841019,77842479,77855345,77869722,77872175	77821241,77841060,77842628,77855482,77869817,77872352	Gene ID= ENSG00000087884.14 TPM= 4.83 Transcript Type= NA
chr11	77821144	77872361	77821144	77872361	+	ENST00000393427.6@AAMDC	ENST00000393427.6	protein_coding	77821144,77842479,77869722,77872175	77821241,77842628,77869817,77872361	Gene ID= ENSG00000087884.14 TPM= 20.75 Transcript Type= protein_coding
chr11	77821129	77872352	77821129	77872352	+	ENST00000526415.5@AAMDC	ENST00000526415.5	protein_coding	77821129,77841019,77842479,77869722,77872175	77821241,77841060,77842628,77869817,77872352	Gene ID= ENSG00000087884.14 TPM= 27.51 Transcript Type= protein_coding
chr11	77878720	77994678	77878720	77994678	-	ENST00000534064.5@INTS4	ENST00000534064.5	protein_coding	77994590,77991108,77981459,77978996,77960953,77960341,77958746,77955942,77941180,77938651,77928342,77924750,77922356,77921340,77918821,77907717,77903540,77901421,77894290,77891681,77891319,77883832,77878720	77994678,77991299,77981576,77979102,77961138,77960391,77958834,77956062,77941251,77938825,77928547,77924892,77922471,77921473,77918978,77907810,77903620,77901551,77894349,77891840,77891462,77883952,77879127	Gene ID= ENSG00000149262.16 TPM= 1.93 Transcript Type= protein_coding
chr11	78063861	78068351	78063861	78068351	+	ENST00000281030.2@THRSP	ENST00000281030.2	protein_coding	78063861,78067659	78064341,78068351	Gene ID= ENSG00000151365.2 TPM= 2.9 Transcript Type= protein_coding
chr11	78068304	78080219	78068304	78080219	-	ENST00000281031.4@NDUFC2	ENST00000281031.4	protein_coding	78079579,78072998,78068304	78080219,78073141,78070036	Gene ID= ENSG00000151366.12 TPM= 203.68 Transcript Type= protein_coding
chr11	78100942	78139660	78100942	78139660	-	ENST00000299626.9@ALG8	ENST00000299626.9	protein_coding	78139494,78127358,78124021,78121065,78119182,78114266,78113886,78112650,78109442,78106807,78104356,78103980,78100942	78139660,78127436,78124214,78121174,78119249,78114392,78113989,78112770,78109581,78106946,78104453,78104052,78101195	Gene ID= ENSG00000159063.12 TPM= 2.9 Transcript Type= protein_coding
chr11	78100946	78139624	78100946	78139624	-	transcript4482.chr11.nic@ALG8	transcript4482.chr11.nic	protein_coding	78139494,78127358,78124021,78121065,78119182,78114266,78113886,78112650,78106807,78104356,78103980,78100946	78139624,78127436,78124214,78121174,78119249,78114392,78113989,78112770,78106912,78104453,78104052,78101195	Gene ID= ENSG00000159063.12 TPM= 1.93 Transcript Type= NA
chr11	78100947	78139592	78100947	78139592	-	ENST00000376156.7@ALG8	ENST00000376156.7	protein_coding	78139494,78127358,78124021,78121065,78119182,78114266,78113886,78112650,78109442,78106807,78104356,78103980,78102874,78100947	78139592,78127436,78124214,78121174,78119249,78114392,78113989,78112770,78109581,78106946,78104453,78104052,78102948,78101195	Gene ID= ENSG00000159063.12 TPM= 1.93 Transcript Type= protein_coding
chr11	78171249	78188822	78171249	78188822	-	ENST00000340067.3@KCTD21	ENST00000340067.3	protein_coding	78188573,78171249	78188822,78174583	Gene ID= ENSG00000188997.7 TPM= 4.83 Transcript Type= protein_coding
chr11	78435961	78574864	78435961	78574864	-	ENST00000281038.9@NARS2	ENST00000281038.9	protein_coding	78574348,78571335,78568632,78566132,78559539,78528842,78493063,78478585,78478438,78469247,78465876,78443661,78441091,78435961	78574864,78571444,78568752,78566272,78559619,78528936,78493195,78478683,78478475,78469313,78466013,78443758,78441117,78436814	Gene ID= ENSG00000137513.9 TPM= 16.41 Transcript Type= protein_coding
chr11	82823502	82900597	82823502	82900597	-	ENST00000313010.7@PRCP	ENST00000313010.7	protein_coding	82900235,82859977,82853177,82850324,82849914,82849049,82839261,82838387,82823502	82900597,82860117,82853278,82850505,82850071,82849218,82839425,82838574,82825122	Gene ID= ENSG00000137509.10 TPM= 4.83 Transcript Type= protein_coding
chr11	82979975	83035561	82979975	83035561	-	transcript4501.chr11.nnic@RAB30	transcript4501.chr11.nnic	protein_coding	83035330,83034172,82997224,82994039,82987587,82979975	83035561,83034272,82997324,82994122,82987770,82982415	Gene ID= ENSG00000137502.9 TPM= 1.93 Transcript Type= NA
chr11	82979268	83071923	82979268	83071923	-	ENST00000534141.5@RAB30	ENST00000534141.5	protein_coding	83071691,82997224,82994039,82987591,82979268	83071923,82997324,82994122,82987770,82982415	Gene ID= ENSG00000137502.9 TPM= 3.86 Transcript Type= protein_coding
chr11	83072055	83073376	83072055	83073376	+	transcript4510.chr11.nic@RAB30-AS1	transcript4510.chr11.nic	lincRNA	83072055,83072623,83073303	83072146,83072702,83073376	Gene ID= ENSG00000246067.7 TPM= 3.86 Transcript Type= NA
chr11	83072066	83073646	83072066	83073646	+	ENST00000501011.6@RAB30-AS1	ENST00000501011.6	lincRNA	83072066,83072623,83073303	83072146,83072804,83073646	Gene ID= ENSG00000246067.7 TPM= 9.65 Transcript Type= lincRNA
chr11	83156988	83187451	83156988	83187451	+	ENST00000298281.8@PCF11	ENST00000298281.8	protein_coding	83156988,83161327,83163679,83164207,83165600,83167125,83167415,83168428,83171818,83177085,83177714,83181008,83181854,83182399,83183038,83184679	83157631,83161452,83163867,83164401,83166714,83167308,83167505,83169995,83171914,83177204,83177819,83181191,83182009,83182491,83183073,83187451	Gene ID= ENSG00000165494.11 TPM= 1.93 Transcript Type= protein_coding
chr11	83193728	83256099	83193728	83256099	+	transcript4524.chr11.nic@ANKRD42	transcript4524.chr11.nic	protein_coding	83193728,83198479,83206058,83210300,83211295,83224855,83227747,83236404,83240759,83245498,83247943,83255845	83194728,83198642,83206165,83210419,83211430,83225055,83227872,83236509,83240934,83245624,83248087,83256099	Gene ID= ENSG00000137494.13 TPM= 2.9 Transcript Type= NA
chr11	83193739	83215200	83193739	83215200	+	ENST00000393389.7@ANKRD42	ENST00000393389.7	protein_coding	83193739,83198479,83206058,83210300,83211295,83212653	83194728,83198642,83206165,83210419,83211430,83215200	Gene ID= ENSG00000137494.13 TPM= 4.83 Transcript Type= protein_coding
chr11	83261462	83285998	83261462	83285998	-	ENST00000529611.5@CCDC90B	ENST00000529611.5	protein_coding	83285127,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83261462	83285998,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966	Gene ID= ENSG00000137500.9 TPM= 3.86 Transcript Type= protein_coding
chr11	83261456	83286351	83261456	83286351	-	ENST00000525503.5@CCDC90B	ENST00000525503.5	protein_coding	83285553,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83261456	83286351,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966	Gene ID= ENSG00000137500.9 TPM= 1.93 Transcript Type= protein_coding
chr11	83259097	83286407	83259097	83286407	-	ENST00000529689.5@CCDC90B	ENST00000529689.5	protein_coding	83285873,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83259097	83286407,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966	Gene ID= ENSG00000137500.9 TPM= 3.86 Transcript Type= protein_coding
chr11	83261462	83285987	83261462	83285987	-	transcript4536.chr11.nic@CCDC90B	transcript4536.chr11.nic	protein_coding	83285553,83280141,83274639,83273951,83273793,83273647,83265865,83261462	83285987,83280260,83274740,83273992,83273864,83273700,83265979,83261966	Gene ID= ENSG00000137500.9 TPM= 2.9 Transcript Type= NA
chr11	85628598	85636502	85628598	85636502	+	transcript4538.chr11.nic@TMEM126B	transcript4538.chr11.nic	protein_coding	85628598,85629132,85631145,85631687,85634086,85635667,85636046	85628688,85629262,85631316,85631808,85634279,85635778,85636502	Gene ID= ENSG00000171204.12 TPM= 1.93 Transcript Type= NA
chr11	85628573	85636539	85628573	85636539	+	ENST00000393375.5@TMEM126B	ENST00000393375.5	protein_coding	85628573,85631145,85631687,85634086,85635667,85636046	85628688,85631316,85631808,85634279,85635778,85636539	Gene ID= ENSG00000171204.12 TPM= 4.83 Transcript Type= protein_coding
chr11	85628585	85636502	85628585	85636502	+	ENST00000358867.10@TMEM126B	ENST00000358867.10	protein_coding	85628585,85631687,85634086,85635667,85636046	85628688,85631808,85634279,85635778,85636502	Gene ID= ENSG00000171204.12 TPM= 3.86 Transcript Type= protein_coding
chr11	85647988	85656543	85647988	85656543	+	ENST00000304511.6@TMEM126A	ENST00000304511.6	protein_coding	85647988,85650249,85654063,85655594,85656309	85648089,85650341,85654256,85655708,85656543	Gene ID= ENSG00000171202.6 TPM= 13.35 Transcript Type= protein_coding
chr11	85647977	85656542	85647977	85656542	+	ENST00000528105.5@TMEM126A	ENST00000528105.5	protein_coding	85647977,85654063,85655594,85656309	85648089,85654256,85655708,85656542	Gene ID= ENSG00000171202.6 TPM= 3.7 Transcript Type= protein_coding
chr11	85647987	85656547	85647987	85656547	+	ENST00000531366.5@TMEM126A	ENST00000531366.5	protein_coding	85647987,85650249,85654063,85655594,85656309	85648089,85650341,85654234,85655708,85656547	Gene ID= ENSG00000171202.6 TPM= 1.28 Transcript Type= nonsense_mediated_decay
chr11	85659708	85665129	85659708	85665129	-	transcript4569.chr11.nic@CREBZF	transcript4569.chr11.nic	protein_coding	85663815,85663524,85659708	85665129,85663601,85662457	Gene ID= ENSG00000137504.13 TPM= 6.76 Transcript Type= NA
chr11	85661066	85665102	85661066	85665102	-	ENST00000527447.1@CREBZF	ENST00000527447.1	protein_coding	85661066	85665102	Gene ID= ENSG00000137504.13 TPM= 16.89 Transcript Type= protein_coding
chr11	85659708	85665102	85659708	85665102	-	ENST00000490820.2@CREBZF	ENST00000490820.2	protein_coding	85663524,85659708	85665102,85662457	Gene ID= ENSG00000137504.13 TPM= 4.34 Transcript Type= nonsense_mediated_decay
chr11	85694275	85719149	85694275	85719149	-	transcript4585.chr11.nic@SYTL2	transcript4585.chr11.nic	protein_coding	85718790,85717483,85714413,85709331,85707429,85704858,85700515,85697979,85696183,85694275	85719149,85717530,85714507,85709500,85707531,85705028,85700593,85698078,85696388,85695340	Gene ID= ENSG00000137501.17 TPM= 1.93 Transcript Type= NA
chr11	85957684	86069112	85957684	86069112	-	transcript4588.chr11.nic@PICALM	transcript4588.chr11.nic	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85990250,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85960675,85957684	86069112,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85990399,85983973,85982003,85981775,85981228,85978093,85976682,85974812,85960777,85959060	Gene ID= ENSG00000073921.17 TPM= 3.26 Transcript Type= NA
chr11	85957684	86069112	85957684	86069112	-	transcript4590.chr11.nic@PICALM	transcript4590.chr11.nic	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85960675,85957684	86069112,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85983973,85981988,85981775,85981228,85978093,85976682,85974812,85960777,85959060	Gene ID= ENSG00000073921.17 TPM= 5.19 Transcript Type= NA
chr11	85957684	86069112	85957684	86069112	-	transcript4594.chr11.nic@PICALM	transcript4594.chr11.nic	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85990250,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957684	86069112,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85990399,85983973,85981988,85981775,85981228,85978093,85976682,85974812,85959060	Gene ID= ENSG00000073921.17 TPM= 2.05 Transcript Type= NA
chr11	85957684	86069112	85957684	86069112	-	transcript4598.chr11.nic@PICALM	transcript4598.chr11.nic	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957684	86069112,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85983973,85981988,85981775,85981228,85978093,85976682,85974812,85959060	Gene ID= ENSG00000073921.17 TPM= 4.94 Transcript Type= NA
chr11	85957684	86069059	85957684	86069059	-	ENST00000532317.5@PICALM	ENST00000532317.5	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957684	86069059,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85983973,85982003,85981775,85981228,85978093,85976682,85974812,85959060	Gene ID= ENSG00000073921.17 TPM= 10.73 Transcript Type= protein_coding
chr11	85957688	86069097	85957688	86069097	-	ENST00000526033.5@PICALM	ENST00000526033.5	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85990250,85983866,85981872,85981745,85981129,85976623,85974708,85957688	86069097,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85990378,85983973,85982003,85981775,85981228,85976682,85974812,85959060	Gene ID= ENSG00000073921.17 TPM= 3.01 Transcript Type= protein_coding
chr11	86244544	86278736	86244544	86278736	+	ENST00000263360.10@EED	ENST00000263360.10	protein_coding	86244544,86250296,86252148,86255222,86256387,86257515,86264172,86266083,86268456,86276980,86277918,86278399	86245343,86250448,86252240,86255287,86256512,86257596,86264263,86266216,86268561,86277138,86277991,86278736	Gene ID= ENSG00000074266.19 TPM= 13.51 Transcript Type= protein_coding
chr11	86244863	86285436	86244863	86285436	+	transcript4612.chr11.nnic@EED	transcript4612.chr11.nnic	protein_coding	86244863,86250296,86252148,86255222,86256387,86257515,86264172,86266083,86268456,86276980,86277918,86284020	86245343,86250448,86252240,86255287,86256512,86257596,86264263,86266216,86268561,86277138,86277991,86285436	Gene ID= ENSG00000074266.19 TPM= 4.83 Transcript Type= NA
chr11	86302223	86345931	86302223	86345931	+	ENST00000278483.7@HIKESHI	ENST00000278483.7	protein_coding	86302223,86306245,86337379,86344603,86345584	86302478,86306482,86337530,86344721,86345931	Gene ID= ENSG00000149196.15 TPM= 32.82 Transcript Type= protein_coding
chr11	86441110	86672428	86441110	86672428	-	transcript4625.chr11.nnic@ME3	transcript4625.chr11.nnic	protein_coding	86672274,86671762,86559690,86556553,86509510,86508792,86503195,86497963,86487337,86465091,86462566,86457366,86450301,86449889,86448150,86447065,86446314,86442821,86441110	86672428,86671958,86559823,86556702,86509627,86508867,86503295,86498124,86487440,86465200,86462677,86457759,86450398,86450002,86448255,86447207,86446487,86442919,86441440	Gene ID= ENSG00000151376.16 TPM= 1.93 Transcript Type= NA
chr11	86441110	86672636	86441110	86672636	-	ENST00000543262.5@ME3	ENST00000543262.5	protein_coding	86672324,86671762,86559690,86556553,86508792,86497963,86487337,86465091,86450301,86449889,86448150,86447065,86446314,86442821,86441110	86672636,86671958,86559823,86556702,86508867,86498124,86487440,86465200,86450398,86450002,86448255,86447207,86446487,86442919,86441440	Gene ID= ENSG00000151376.16 TPM= 2.41 Transcript Type= protein_coding
chr11	86441108	86672198	86441108	86672198	-	ENST00000393324.7@ME3	ENST00000393324.7	protein_coding	86671762,86559690,86556553,86508792,86497963,86487337,86465091,86450301,86449889,86448150,86447065,86446314,86442821,86441108	86672198,86559823,86556702,86508867,86498124,86487440,86465200,86450398,86450002,86448255,86447207,86446487,86442919,86441440	Gene ID= ENSG00000151376.16 TPM= 4.34 Transcript Type= protein_coding
chr11	86800240	86811233	86800240	86811233	+	ENST00000280258.5@PRSS23	ENST00000280258.5	protein_coding	86800240,86807631	86800651,86811233	Gene ID= ENSG00000150687.11 TPM= 6.76 Transcript Type= protein_coding
chr11	86921529	86955471	86921529	86955471	-	transcript4645.chr11.nnic@FZD4	transcript4645.chr11.nnic	protein_coding	86954801,86951208,86936777,86921529	86955471,86952470,86936863,86922098	Gene ID= ENSG00000174804.3 TPM= 1.93 Transcript Type= NA
chr11	86918874	86955395	86918874	86955395	-	transcript4651.chr11.nnic@FZD4	transcript4651.chr11.nnic	protein_coding	86954801,86951208,86918874	86955395,86952470,86922098	Gene ID= ENSG00000174804.3 TPM= 2.41 Transcript Type= NA
chr11	86921687	86955471	86921687	86955471	-	transcript4657.chr11.nnic@FZD4	transcript4657.chr11.nnic	protein_coding	86954801,86950789,86921687	86955471,86952470,86922098	Gene ID= ENSG00000174804.3 TPM= 5.79 Transcript Type= NA
chr11	86918872	86955465	86918872	86955465	-	transcript4662.chr11.nnic@FZD4	transcript4662.chr11.nnic	protein_coding	86954801,86918872	86955465,86922098	Gene ID= ENSG00000174804.3 TPM= 8.69 Transcript Type= NA
chr11	86919471	86955465	86919471	86955465	-	transcript4663.chr11.nnic@FZD4	transcript4663.chr11.nnic	protein_coding	86954801,86919471	86955465,86922098	Gene ID= ENSG00000174804.3 TPM= 2.41 Transcript Type= NA
chr11	86921530	86955465	86921530	86955465	-	transcript4666.chr11.nnic@FZD4	transcript4666.chr11.nnic	protein_coding	86954801,86921530	86955465,86922098	Gene ID= ENSG00000174804.3 TPM= 3.86 Transcript Type= NA
chr11	86921687	86955465	86921687	86955465	-	transcript4667.chr11.nnic@FZD4	transcript4667.chr11.nnic	protein_coding	86954801,86921687	86955465,86922098	Gene ID= ENSG00000174804.3 TPM= 1.93 Transcript Type= NA
chr11	86945679	86955391	86945679	86955391	-	ENST00000531380.1@FZD4	ENST00000531380.1	protein_coding	86954801,86945679	86955391,86952470	Gene ID= ENSG00000174804.3 TPM= 585.94 Transcript Type= protein_coding
chr11	86953624	86955397	86953624	86955397	-	transcript4672.chr11.nnic@NA	transcript4672.chr11.nnic	NA	86953624	86955397	Gene ID= novel_gene_chr11_4673 TPM= 6.76 Transcript Type= NA
chr11	87037844	87323758	87037844	87323758	+	ENST00000340353.11@TMEM135	ENST00000340353.11	protein_coding	87037844,87067694,87071523,87091362,87236638,87295782,87302296,87305936,87309505,87313425,87314471,87318137,87319310,87321201	87038186,87067821,87071615,87091395,87236684,87295823,87302442,87306005,87309672,87313488,87314547,87318235,87319377,87323758	Gene ID= ENSG00000166575.16 TPM= 1.45 Transcript Type= protein_coding
chr11	87038007	87322350	87038007	87322350	+	ENST00000305494.5@TMEM135	ENST00000305494.5	protein_coding	87038007,87067694,87071523,87091362,87157341,87236638,87295782,87302296,87305936,87309505,87313425,87314471,87318137,87319310,87321201	87038186,87067821,87071615,87091395,87157406,87236684,87295823,87302442,87306005,87309672,87313488,87314547,87318235,87319377,87322350	Gene ID= ENSG00000166575.16 TPM= 1.45 Transcript Type= protein_coding
chr11	87325887	87326128	87325887	87326128	-	transcript4697.chr11.nnic@NA	transcript4697.chr11.nnic	NA	87325887	87326128	Gene ID= novel_gene_chr11_4698 TPM= 1.93 Transcript Type= NA
chr11	88293592	88337787	88293592	88337787	-	ENST00000227266.9@CTSC	ENST00000227266.9	protein_coding	88337501,88334937,88312388,88309163,88300530,88296133,88293592	88337787,88335082,88312554,88309318,88300645,88296264,88294508	Gene ID= ENSG00000109861.15 TPM= 1.93 Transcript Type= protein_coding
chr11	90201160	90223364	90201160	90223364	-	ENST00000320585.10@CHORDC1	ENST00000320585.10	protein_coding	90222891,90218135,90215174,90214018,90211215,90210536,90206202,90205460,90203308,90202813,90201160	90223364,90218184,90215230,90214175,90211318,90210594,90206272,90205565,90203427,90202875,90202551	Gene ID= ENSG00000110172.11 TPM= 14.48 Transcript Type= protein_coding
chr11	93478472	93543508	93478472	93543508	-	ENST00000298966.6@SMCO4	ENST00000298966.6	protein_coding	93543276,93499276,93478472	93543508,93499348,93479269	Gene ID= ENSG00000166002.6 TPM= 4.83 Transcript Type= protein_coding
chr11	93730194	93741496	93730194	93741496	-	transcript4723.chr11.nic@TAF1D	transcript4723.chr11.nic	protein_coding	93741322,93739237,93738109,93737064,93736694,93736141,93734625,93733350,93733087,93732244,93731753,93731150,93730677,93730194	93741496,93739331,93738499,93737239,93736751,93736304,93734660,93733397,93733121,93732291,93731799,93731216,93730712,93730447	Gene ID= ENSG00000166012.16 TPM= 4.18 Transcript Type= NA
chr11	93730283	93741496	93730283	93741496	-	transcript4724.chr11.nnic@TAF1D	transcript4724.chr11.nnic	protein_coding	93741322,93739237,93738109,93737064,93736694,93735881,93734625,93733350,93733087,93732244,93731753,93731150,93730677,93730283	93741496,93739331,93738499,93737239,93736751,93736304,93734660,93733397,93733121,93732291,93731799,93731216,93730712,93730447	Gene ID= ENSG00000166012.16 TPM= 1.93 Transcript Type= NA
chr11	93729948	93741494	93729948	93741494	-	ENST00000323981.6@TAF1D	ENST00000323981.6	protein_coding	93741322,93739237,93738109,93737064,93736694,93736141,93734625,93733350,93733087,93732244,93731753,93729948	93741494,93739331,93738499,93737239,93736751,93736304,93734660,93733397,93733121,93732291,93731799,93731216	Gene ID= ENSG00000166012.16 TPM= 1.28 Transcript Type= nonsense_mediated_decay
chr11	93735567	93741945	93735567	93741945	-	ENST00000448108.6@TAF1D	ENST00000448108.6	protein_coding	93741322,93739237,93738109,93737064,93736694,93735567	93741945,93739331,93738499,93737239,93736751,93736304	Gene ID= ENSG00000166012.16 TPM= 3.86 Transcript Type= protein_coding
chr11	93741594	93763102	93741594	93763102	+	ENST00000617482.4@C11orf54	ENST00000617482.4	protein_coding	93741594,93747297,93750346,93753682,93753936,93757316,93759742,93761515	93741728,93747448,93750444,93753755,93754037,93757465,93759858,93763102	Gene ID= ENSG00000182919.14 TPM= 2.41 Transcript Type= protein_coding
chr11	93741594	93763102	93741594	93763102	+	ENST00000540113.5@C11orf54	ENST00000540113.5	protein_coding	93741594,93750346,93753682,93753936,93755210,93757316,93759742,93761515	93741728,93750444,93753755,93754037,93755386,93757465,93759858,93763102	Gene ID= ENSG00000182919.14 TPM= 2.41 Transcript Type= protein_coding
chr11	93741633	93744417	93741633	93744417	+	transcript4752.chr11.nnic@C11orf54	transcript4752.chr11.nnic	protein_coding	93741633,93741963,93743018	93741728,93742141,93744417	Gene ID= ENSG00000182919.14 TPM= 1.93 Transcript Type= NA
chr11	93741669	93762316	93741669	93762316	+	ENST00000354421.7@C11orf54	ENST00000354421.7	protein_coding	93741669,93747297,93750346,93753682,93753936,93755210,93757316,93759742,93761515	93741728,93747448,93750444,93753755,93754037,93755386,93757465,93759858,93762316	Gene ID= ENSG00000182919.14 TPM= 6.76 Transcript Type= protein_coding
chr11	93764654	93767004	93764654	93767004	+	transcript4755.chr11.nnic@NA	transcript4755.chr11.nnic	NA	93764654	93767004	Gene ID= novel_gene_chr11_4756 TPM= 1.93 Transcript Type= NA
chr11	93784227	93814963	93784227	93814963	+	ENST00000251871.8@MED17	ENST00000251871.8	protein_coding	93784227,93788001,93790574,93793728,93793951,93794908,93796410,93797535,93801835,93807518,93809717,93811853	93784763,93788167,93790793,93793864,93794035,93795060,93796540,93797719,93801972,93807635,93809876,93814963	Gene ID= ENSG00000042429.11 TPM= 6.76 Transcript Type= protein_coding
chr11	94128928	94181972	94128928	94181972	+	ENST00000227638.7@PANX1	ENST00000227638.7	protein_coding	94128928,94153491,94178369,94179602,94180790	94129493,94153630,94178592,94180257,94181972	Gene ID= ENSG00000110218.8 TPM= 8.69 Transcript Type= protein_coding
chr11	94415578	94493908	94415578	94493908	-	ENST00000323929.7@MRE11	ENST00000323929.7	protein_coding	94493791,94492782,94490833,94485924,94479674,94478735,94476289,94471574,94470471,94467813,94464113,94460936,94459408,94456276,94447219,94445810,94437177,94435832,94429911,94415578	94493908,94492906,94490965,94486084,94479761,94478876,94476403,94471759,94470642,94467893,94464239,94461036,94459581,94456338,94447438,94445893,94437235,94435899,94429986,94420181	Gene ID= ENSG00000020922.12 TPM= 1.93 Transcript Type= protein_coding
chr11	94419866	94493840	94419866	94493840	-	transcript4777.chr11.nnic@MRE11	transcript4777.chr11.nnic	protein_coding	94493684,94492782,94490833,94485924,94478735,94476289,94472469,94471574,94470471,94467813,94464113,94460936,94459408,94456276,94447219,94437177,94435832,94429911,94419866	94493840,94492906,94490965,94486084,94478876,94476403,94473461,94471759,94470642,94467893,94464239,94461036,94459581,94456338,94447438,94437235,94435899,94429986,94420181	Gene ID= ENSG00000020922.12 TPM= 1.93 Transcript Type= NA
chr11	94493629	94499583	94493629	94499583	+	ENST00000544612.5@ANKRD49	ENST00000544612.5	protein_coding	94493629,94496604,94498071	94494035,94496951,94499583	Gene ID= ENSG00000168876.8 TPM= 10.62 Transcript Type= protein_coding
chr11	94543840	94549898	94543840	94549898	+	ENST00000358752.3@FUT4	ENST00000358752.3	protein_coding	94543840	94549898	Gene ID= ENSG00000196371.3 TPM= 1.93 Transcript Type= protein_coding
chr11	94768316	94871144	94768316	94871144	+	transcript4786.chr11.nnic@AMOTL1	transcript4786.chr11.nnic	protein_coding	94768316,94795011,94796966,94799390,94821530,94830050,94831452,94850114,94853933,94859525,94864735,94865942,94869198,94870689	94768560,94795160,94797020,94800311,94821821,94830194,94831541,94850259,94854082,94859715,94864860,94866168,94869473,94871144	Gene ID= ENSG00000166025.17 TPM= 21.8 Transcript Type= NA
chr11	94768099	94870337	94768099	94870337	+	transcript4801.chr11.nic@AMOTL1	transcript4801.chr11.nic	protein_coding	94768099,94795011,94799390,94821530,94830050,94831452,94850114,94853933,94859525,94864735,94865942,94869198	94768560,94795160,94800311,94821821,94830194,94831541,94850259,94854082,94859715,94864860,94866168,94870337	Gene ID= ENSG00000166025.17 TPM= 44.33 Transcript Type= NA
chr11	94870688	94876210	94870688	94876210	+	transcript4822.chr11.nnic@NA	transcript4822.chr11.nnic	NA	94870688	94876210	Gene ID= novel_gene_chr11_4823 TPM= 26.06 Transcript Type= NA
chr11	94962622	94973612	94962622	94973612	-	ENST00000279839.7@CWC15	ENST00000279839.7	protein_coding	94973498,94972055,94971375,94970977,94969989,94966295,94962622	94973612,94972193,94971487,94971065,94970096,94966413,94963514	Gene ID= ENSG00000150316.11 TPM= 1.93 Transcript Type= protein_coding
chr11	95067471	95069123	95067471	95069123	+	transcript4830.chr11.nnic@SRSF8	transcript4830.chr11.nnic	protein_coding	95067471,95068427,95068655	95068183,95068558,95069123	Gene ID= ENSG00000263465.4 TPM= 1.93 Transcript Type= NA
chr11	95067197	95071224	95067197	95071224	+	ENST00000587424.2@SRSF8	ENST00000587424.2	protein_coding	95067197	95071224	Gene ID= ENSG00000263465.4 TPM= 6.76 Transcript Type= protein_coding
chr11	95089810	95132645	95089810	95132645	+	ENST00000278505.4@ENDOD1	ENST00000278505.4	protein_coding	95089810,95128377	95090227,95132645	Gene ID= ENSG00000149218.4 TPM= 48.27 Transcript Type= protein_coding
chr11	95135297	95137295	95135297	95137295	+	transcript4846.chr11.nnic@NA	transcript4846.chr11.nnic	NA	95135297	95137295	Gene ID= novel_gene_chr11_4847 TPM= 3.86 Transcript Type= NA
chr11	95790461	95832693	95790461	95832693	+	ENST00000325542.9@CEP57	ENST00000325542.9	protein_coding	95790461,95799232,95812932,95813468,95817787,95818827,95821871,95822499,95827786,95829187,95831026	95790743,95799388,95813111,95813589,95817903,95818904,95821978,95822576,95828027,95829331,95832693	Gene ID= ENSG00000166037.10 TPM= 2.9 Transcript Type= protein_coding
chr11	95790522	95818903	95790522	95818903	+	ENST00000541365.5@CEP57	ENST00000541365.5	protein_coding	95790522,95799237,95812932,95813468,95817787,95818827	95790743,95799388,95813111,95813589,95817903,95818903	Gene ID= ENSG00000166037.10 TPM= 1.93 Transcript Type= protein_coding
chr11	95834089	95924107	95834089	95924107	-	transcript4864.chr11.nnic@MTMR2	transcript4864.chr11.nnic	protein_coding	95923875,95888156,95882374,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089	95924107,95888261,95882496,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451	Gene ID= ENSG00000087053.18 TPM= 2.25 Transcript Type= NA
chr11	95834089	95924107	95834089	95924107	-	transcript4865.chr11.nic@MTMR2	transcript4865.chr11.nic	protein_coding	95923875,95888156,95887612,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089	95924107,95888261,95887684,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451	Gene ID= ENSG00000087053.18 TPM= 6.11 Transcript Type= NA
chr11	95834089	95924100	95834089	95924100	-	ENST00000352297.11@MTMR2	ENST00000352297.11	protein_coding	95923875,95914242,95888156,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089	95924100,95914312,95888261,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451	Gene ID= ENSG00000087053.18 TPM= 4.18 Transcript Type= protein_coding
chr11	96352769	96389909	96352769	96389909	-	transcript4873.chr11.nic@CCDC82	transcript4873.chr11.nic	protein_coding	96389844,96387530,96386254,96383962,96383269,96373375,96371013,96364980,96358993,96352769	96389909,96387613,96386293,96384761,96383473,96373467,96371137,96365150,96359178,96353714	Gene ID= ENSG00000149231.11 TPM= 5.31 Transcript Type= NA
chr11	96352769	96389915	96352769	96389915	-	transcript4876.chr11.nnic@CCDC82	transcript4876.chr11.nnic	protein_coding	96389844,96383962,96383269,96373375,96371013,96364980,96358993,96352769	96389915,96384761,96383473,96373467,96371137,96365150,96359178,96353714	Gene ID= ENSG00000149231.11 TPM= 2.41 Transcript Type= NA
chr11	96389994	96393257	96389994	96393257	+	ENST00000332349.4@JRKL	ENST00000332349.4	protein_coding	96389994,96390483	96390073,96393257	Gene ID= ENSG00000183340.6 TPM= 6.76 Transcript Type= protein_coding
chr11	96390013	96390777	96390013	96390777	+	transcript4885.chr11.nnic@NA	transcript4885.chr11.nnic	NA	96390013	96390777	Gene ID= novel_gene_chr11_4886 TPM= 2.9 Transcript Type= NA
chr11	102347187	102348703	102347187	102348703	+	transcript4906.chr11.nic@BIRC2	transcript4906.chr11.nic	protein_coding	102347187,102348598	102347376,102348703	Gene ID= ENSG00000110330.8 TPM= 10.62 Transcript Type= NA
chr11	102347235	102378670	102347235	102378670	+	ENST00000227758.6@BIRC2	ENST00000227758.6	protein_coding	102347235,102348598,102350844,102362896,102363668,102368306,102377496,102377857,102377990	102347376,102350749,102350943,102362974,102363716,102368548,102377750,102377898,102378670	Gene ID= ENSG00000110330.8 TPM= 44.4 Transcript Type= protein_coding
chr11	102396336	102453044	102396336	102453044	-	ENST00000398136.6@TMEM123	ENST00000398136.6	protein_coding	102452524,102448812,102401916,102401539,102396336	102453044,102448868,102402206,102401692,102398891	Gene ID= ENSG00000152558.14 TPM= 21.24 Transcript Type= protein_coding
chr11	103062079	103092215	103062079	103092215	-	ENST00000260247.9@DCUN1D5	ENST00000260247.9	protein_coding	103091787,103089227,103083256,103082748,103066459,103066269,103064275,103062079	103092215,103089318,103083326,103082839,103066567,103066373,103064377,103062414	Gene ID= ENSG00000137692.11 TPM= 44.4 Transcript Type= protein_coding
chr11	103907186	104164107	103907186	104164107	-	ENST00000393158.6@PDGFD	ENST00000393158.6	protein_coding	104163804,104000051,103996065,103947662,103943452,103926912,103907186	104164107,104000255,103996245,103947724,103943650,103927126,103909819	Gene ID= ENSG00000170962.12 TPM= 2.9 Transcript Type= protein_coding
chr11	104942866	104969436	104942866	104969436	-	ENST00000444739.6@CASP4	ENST00000444739.6	protein_coding	104968519,104954747,104951896,104950925,104949543,104948533,104947083,104944748,104942866	104969436,104955001,104952005,104951098,104949777,104948676,104947192,104944851,104942973	Gene ID= ENSG00000196954.13 TPM= 3.86 Transcript Type= protein_coding
chr11	105025508	105035149	105025508	105035149	-	ENST00000533400.5@CASP1	ENST00000533400.5	protein_coding	105035107,105034208,105033064,105031165,105030330,105029665,105029124,105026842,105025508	105035149,105034474,105033126,105031280,105030503,105029899,105029267,105026951,105026356	Gene ID= ENSG00000137752.23 TPM= 1.93 Transcript Type= protein_coding
chr11	106007902	106022229	106007902	106022229	-	transcript4930.chr11.nic@MSANTD4	transcript4930.chr11.nic	protein_coding	106021836,106010456,106007902	106022229,106011067,106010110	Gene ID= ENSG00000170903.10 TPM= 7.72 Transcript Type= NA
chr11	106010896	106022269	106010896	106022269	-	transcript4935.chr11.nic@MSANTD4	transcript4935.chr11.nic	protein_coding	106020962,106010896	106022269,106011067	Gene ID= ENSG00000170903.10 TPM= 2.9 Transcript Type= NA
chr11	106007902	106022227	106007902	106022227	-	ENST00000301919.8@MSANTD4	ENST00000301919.8	protein_coding	106020962,106010456,106007902	106022227,106011067,106010110	Gene ID= ENSG00000170903.10 TPM= 16.41 Transcript Type= protein_coding
chr11	106004242	106008536	106004242	106008536	-	transcript4936.chr11.nnic@NA	transcript4936.chr11.nnic	NA	106004242	106008536	Gene ID= novel_gene_chr11_4937 TPM= 1.93 Transcript Type= NA
chr11	106077489	106098710	106077489	106098710	+	ENST00000278618.8@AASDHPPT	ENST00000278618.8	protein_coding	106077489,106079467,106090557,106091316,106094583,106096743	106077893,106079692,106090678,106091477,106094654,106098710	Gene ID= ENSG00000149313.10 TPM= 98.46 Transcript Type= protein_coding
chr11	106674012	107018524	106674012	107018524	-	ENST00000526355.6@GUCY1A2	ENST00000526355.6	protein_coding	107017753,106986070,106978619,106939460,106809993,106776439,106708512,106674012	107018524,106986131,106978740,106940178,106810478,106776582,106708666,106687756	Gene ID= ENSG00000152402.10 TPM= 2.9 Transcript Type= protein_coding
chr11	107326345	107457844	107326345	107457844	-	ENST00000282251.9@CWF19L2	ENST00000282251.9	protein_coding	107457712,107455666,107454450,107442939,107441503,107439090,107433634,107428799,107418194,107416209,107392779,107390074,107353524,107348937,107336558,107334881,107329918,107326345	107457844,107455776,107454572,107443049,107441622,107439183,107433749,107429451,107418287,107416298,107392895,107390211,107353736,107349053,107336713,107334961,107330019,107327053	Gene ID= ENSG00000152404.15 TPM= 5.79 Transcript Type= protein_coding
chr11	107502726	107565746	107502726	107565746	-	ENST00000428149.6@ALKBH8	ENST00000428149.6	protein_coding	107565601,107560765,107556766,107553847,107553108,107551808,107549753,107532300,107525441,107522299,107510887,107502726	107565746,107560899,107557003,107553978,107553203,107551912,107549823,107532406,107525592,107522555,107511036,107505215	Gene ID= ENSG00000137760.14 TPM= 2.9 Transcript Type= protein_coding
chr11	107707378	107719693	107707378	107719693	-	ENST00000531293.1@SLN	ENST00000531293.1	protein_coding	107719616,107711963,107707378	107719693,107712162,107708005	Gene ID= ENSG00000170290.3 TPM= 393.68 Transcript Type= protein_coding
chr11	107707378	107712057	107707378	107712057	-	transcript4962.chr11.nnic@SLN	transcript4962.chr11.nnic	protein_coding	107711827,107707378	107712057,107708005	Gene ID= ENSG00000170290.3 TPM= 23.65 Transcript Type= NA
chr11	107707383	107712061	107707383	107712061	-	ENST00000305991.2@SLN	ENST00000305991.2	protein_coding	107711963,107707383	107712061,107708005	Gene ID= ENSG00000170290.3 TPM= 89.61 Transcript Type= protein_coding
chr11	108008733	108107776	108008733	108107776	+	ENST00000393094.6@CUL5	ENST00000393094.6	protein_coding	108008733,108033802,108046270,108049890,108052660,108054647,108054875,108070096,108072332,108073390,108078176,108088527,108089492,108094391,108094812,108095530,108097636,108098406,108104190	108009372,108033911,108046369,108050066,108052801,108054792,108054955,108070189,108072462,108073497,108078240,108088659,108089623,108094514,108094987,108095691,108097754,108098529,108107776	Gene ID= ENSG00000166266.13 TPM= 2.41 Transcript Type= protein_coding
chr11	108008841	108106694	108008841	108106694	+	transcript4968.chr11.nnic@CUL5	transcript4968.chr11.nnic	protein_coding	108008841,108033802,108046270,108049890,108052660,108054647,108054875,108070096,108072332,108073390,108078176,108088527,108089492,108094391,108094812,108095530,108097636,108098406,108106207	108009372,108033911,108046369,108050066,108052801,108054792,108054955,108070189,108072462,108073497,108078240,108088659,108089623,108094514,108094987,108095691,108097754,108098529,108106694	Gene ID= ENSG00000166266.13 TPM= 4.34 Transcript Type= NA
chr11	108008904	108096110	108008904	108096110	+	transcript4972.chr11.nic@CUL5	transcript4972.chr11.nic	protein_coding	108008904,108033802,108046270,108049890,108052660,108054647,108054875,108070096,108072332,108073390,108078176,108088527,108089492,108094391,108094812,108095530	108009372,108033911,108046369,108050066,108052801,108054792,108054955,108070189,108072462,108073497,108078240,108088659,108089623,108094514,108094987,108096110	Gene ID= ENSG00000166266.13 TPM= 2.9 Transcript Type= NA
chr11	108009327	108071255	108009327	108071255	+	transcript4975.chr11.nic@CUL5	transcript4975.chr11.nic	protein_coding	108009327,108033802,108046270,108049890,108052660,108054647,108054875,108070096	108009372,108033911,108046369,108050066,108052801,108054792,108054955,108071255	Gene ID= ENSG00000166266.13 TPM= 2.9 Transcript Type= NA
chr11	108121516	108147776	108121516	108147776	+	ENST00000265838.8@ACAT1	ENST00000265838.8	protein_coding	108121516,108131907,108133820,108134221,108135142,108138898,108140065,108141605,108142437,108143983,108146202,108147270	108121678,108131954,108133937,108134316,108135242,108139041,108140215,108141700,108142550,108144047,108146359,108147776	Gene ID= ENSG00000075239.13 TPM= 4.83 Transcript Type= protein_coding
chr11	108160893	108222659	108160893	108222659	-	transcript4989.chr11.nic@NPAT	transcript4989.chr11.nic	protein_coding	108222500,108197302,108193957,108192118,108190460,108189106,108188098,108186482,108185403,108185232,108176994,108176246,108172199,108169928,108169744,108162120,108160893	108222659,108197420,108194017,108192190,108190500,108189330,108188179,108186569,108185494,108185319,108177090,108176374,108173851,108170043,108169852,108162180,108162014	Gene ID= ENSG00000149308.16 TPM= 3.86 Transcript Type= NA
chr11	108472105	108498432	108472105	108498432	-	ENST00000323468.9@KDELC2	ENST00000323468.9	protein_coding	108498165,108490970,108486157,108482006,108481180,108479301,108477607,108472105	108498432,108491167,108486440,108482222,108481376,108479495,108477711,108474952	Gene ID= ENSG00000178202.12 TPM= 1.93 Transcript Type= protein_coding
chr11	108665025	108940930	108665025	108940930	+	ENST00000322536.7@DDX10	ENST00000322536.7	protein_coding	108665025,108673467,108675596,108677085,108678315,108679371,108688936,108691876,108693516,108706739,108715879,108719797,108722997,108838446,108841315,108852153,108917873,108940246	108665339,108673527,108675726,108677243,108678435,108679560,108689062,108692038,108693600,108706837,108715966,108719885,108723462,108838565,108841476,108852209,108918018,108940930	Gene ID= ENSG00000178105.9 TPM= 12.55 Transcript Type= protein_coding
chr11	110247813	110296643	110247813	110296643	-	transcript5007.chr11.nic@RDX	transcript5007.chr11.nic	protein_coding	110296467,110279681,110272536,110264779,110263960,110258106,110257767,110255289,110253946,110247813	110296643,110279756,110272619,110264874,110264234,110258189,110257913,110255385,110254109,110247833	Gene ID= ENSG00000137710.14 TPM= 15.76 Transcript Type= NA
chr11	110229450	110296722	110229450	110296722	-	ENST00000343115.8@RDX	ENST00000343115.8	protein_coding	110296467,110279681,110272536,110264779,110263960,110258106,110257767,110255289,110253946,110247703,110237492,110236099,110233237,110229450	110296722,110279756,110272619,110264874,110264234,110258189,110257913,110255385,110254109,110247833,110237652,110236191,110233479,110232033	Gene ID= ENSG00000137710.14 TPM= 40.86 Transcript Type= protein_coding
chr11	110429883	110464881	110429883	110464881	+	ENST00000260270.2@FDX1	ENST00000260270.2	protein_coding	110429883,110435834,110456918,110462354	110430305,110435958,110457047,110464881	Gene ID= ENSG00000137714.2 TPM= 15.44 Transcript Type= protein_coding
chr11	111245854	111286401	111245854	111286401	+	ENST00000280325.5@C11orf53	ENST00000280325.5	protein_coding	111245854,111255989,111281398,111284076,111285653	111245863,111256092,111281440,111284377,111286401	Gene ID= ENSG00000150750.7 TPM= 2.9 Transcript Type= protein_coding
chr11	111540659	111560960	111540659	111560960	+	ENST00000375615.7@LAYN	ENST00000375615.7	protein_coding	111540659,111541562,111543923,111549618,111554561,111555207,111557541,111560095	111540928,111541585,111544220,111549775,111554593,111555290,111557643,111560960	Gene ID= ENSG00000204381.11 TPM= 4.83 Transcript Type= protein_coding
chr11	111540508	111561063	111540508	111561063	+	ENST00000375614.6@LAYN	ENST00000375614.6	protein_coding	111540508,111543923,111549618,111554561,111555207,111557541,111560095	111540928,111544220,111549775,111554593,111555290,111557643,111561063	Gene ID= ENSG00000204381.11 TPM= 1.93 Transcript Type= protein_coding
chr11	111540730	111560918	111540730	111560918	+	ENST00000533265.5@LAYN	ENST00000533265.5	protein_coding	111540730,111543923,111549618,111554561,111555207,111557541,111560095	111540928,111544220,111549775,111554593,111555290,111557647,111560918	Gene ID= ENSG00000204381.11 TPM= 2.9 Transcript Type= protein_coding
chr11	111602391	111730853	111602391	111730853	+	ENST00000304987.3@SIK2	ENST00000304987.3	protein_coding	111602391,111616243,111620339,111688001,111700886,111701452,111703203,111704987,111712211,111719775,111720478,111720899,111721830,111722665,111723496	111602698,111616359,111620402,111688162,111701010,111701575,111703423,111705139,111712375,111720003,111720762,111721062,111721940,111722756,111730853	Gene ID= ENSG00000170145.4 TPM= 16.41 Transcript Type= protein_coding
chr11	111786284	111871581	111786284	111871581	-	ENST00000616540.4@ALG9	ENST00000616540.4	protein_coding	111871352,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786284	111871581,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838399,111837615,111836294,111809773,111786520	Gene ID= ENSG00000086848.14 TPM= 2.41 Transcript Type= protein_coding
chr11	111782195	111838305	111782195	111838305	-	ENST00000532425.6@ALG9	ENST00000532425.6	protein_coding	111838249,111837468,111836165,111809643,111786402,111782195	111838305,111837615,111836294,111809773,111786520,111786094	Gene ID= ENSG00000086848.14 TPM= 1.93 Transcript Type= protein_coding
chr11	111786256	111871533	111786256	111871533	-	ENST00000614444.4@ALG9	ENST00000614444.4	protein_coding	111871352,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786256	111871533,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838378,111837615,111836294,111809773,111786520	Gene ID= ENSG00000086848.14 TPM= 4.34 Transcript Type= protein_coding
chr11	111908622	111913213	111908622	111913213	-	ENST00000616970.4@CRYAB	ENST00000616970.4	protein_coding	111913105,111911524,111910327,111908622	111913213,111911922,111910449,111908967	Gene ID= ENSG00000109846.7 TPM= 918.57 Transcript Type= protein_coding
chr11	111908623	111913181	111908623	111913181	-	transcript5063.chr11.nic@CRYAB	transcript5063.chr11.nic	protein_coding	111913139,111911524,111910327,111908623	111913181,111911922,111910449,111908967	Gene ID= ENSG00000109846.7 TPM= 1268.82 Transcript Type= NA
chr11	111908620	111910893	111908620	111910893	-	ENST00000525823.1@CRYAB	ENST00000525823.1	protein_coding	111910327,111908620	111910893,111908967	Gene ID= ENSG00000109846.7 TPM= 25.58 Transcript Type= protein_coding
chr11	111908624	111911770	111908624	111911770	-	transcript5077.chr11.nnic@NA	transcript5077.chr11.nnic	NA	111908624	111911770	Gene ID= novel_gene_chr11_5078 TPM= 20.27 Transcript Type= NA
chr11	111912242	111914093	111912242	111914093	+	ENST00000304298.3@HSPB2	ENST00000304298.3	protein_coding	111912242,111913441	111912923,111914093	Gene ID= ENSG00000170276.5 TPM= 83.02 Transcript Type= protein_coding
chr11	111913741	111926871	111913741	111926871	+	transcript5056.chr11.nnic@HSPB2-C11orf52	transcript5056.chr11.nnic	protein_coding	111913741,111918678,111924326,111925653,111925960	111913940,111919004,111924363,111925714,111926871	Gene ID= ENSG00000254445.1 TPM= 2.9 Transcript Type= NA
chr11	111913251	111926871	111913251	111926871	+	transcript5057.chr11.nnic@HSPB2-C11orf52	transcript5057.chr11.nnic	protein_coding	111913251,111924326,111925653,111925960	111913940,111924363,111925714,111926871	Gene ID= ENSG00000254445.1 TPM= 2.9 Transcript Type= NA
chr11	112024814	112064390	112024814	112064390	+	ENST00000280346.10@DLAT	ENST00000280346.10	protein_coding	112024814,112026198,112028515,112028792,112033404,112037273,112039244,112043466,112045138,112045863,112051234,112059903,112061038,112062406	112025751,112026299,112028639,112028945,112033530,112037460,112039397,112043533,112045230,112045970,112051349,112060065,112061174,112064390	Gene ID= ENSG00000150768.15 TPM= 17.45 Transcript Type= protein_coding
chr11	112025440	112064390	112025440	112064390	+	ENST00000393051.5@DLAT	ENST00000393051.5	protein_coding	112025440,112026198,112028515,112028792,112039244,112043466,112045138,112045863,112051234,112059903,112061038,112062406	112025751,112026299,112028639,112028945,112039397,112043533,112045230,112045970,112051349,112060065,112061174,112064390	Gene ID= ENSG00000150768.15 TPM= 1.69 Transcript Type= protein_coding
chr11	112084800	112086798	112084800	112086798	-	ENST00000509359.6@TIMM8B	ENST00000509359.6	protein_coding	112086640,112085978,112084800	112086798,112086310,112085462	Gene ID= ENSG00000150779.11 TPM= 9.65 Transcript Type= nonsense_mediated_decay
chr11	112085149	112086722	112085149	112086722	-	ENST00000507614.1@TIMM8B	ENST00000507614.1	protein_coding	112086640,112085967,112085149	112086722,112086310,112085462	Gene ID= ENSG00000150779.11 TPM= 24.13 Transcript Type= processed_transcript
chr11	112143257	112164094	112143257	112164094	-	transcript5105.chr11.nnic@IL18	transcript5105.chr11.nnic	protein_coding	112163906,112159227,112154975,112153592,112150072,112148603,112143257	112164094,112159371,112155061,112153603,112150206,112148736,112143817	Gene ID= ENSG00000150782.11 TPM= 2.41 Transcript Type= NA
chr11	112143251	112164117	112143251	112164117	-	ENST00000280357.11@IL18	ENST00000280357.11	protein_coding	112163906,112154975,112153592,112150072,112148603,112143251	112164117,112155061,112153603,112150206,112148736,112143817	Gene ID= ENSG00000150782.11 TPM= 8.21 Transcript Type= protein_coding
chr11	112175467	112218929	112175467	112218929	+	ENST00000357685.9@BCO2	ENST00000357685.9	protein_coding	112175467,112179278,112193474,112193879,112194653,112199699,112200613,112202023,112213724,112214762,112216220,112217761	112175689,112179482,112193697,112193994,112194755,112199827,112200773,112202190,112213861,112214944,112216330,112218929	Gene ID= ENSG00000197580.11 TPM= 2.9 Transcript Type= protein_coding
chr11	112226365	112233810	112226365	112233810	+	transcript5136.chr11.nnic@PTS	transcript5136.chr11.nnic	protein_coding	112226365,112228594,112229417,112230208,112230626,112233163,112233432	112226526,112228673,112229486,112230230,112230682,112233233,112233810	Gene ID= ENSG00000150787.7 TPM= 3.21 Transcript Type= NA
chr11	112226365	112233973	112226365	112233973	+	ENST00000280362.7@PTS	ENST00000280362.7	protein_coding	112226365,112228594,112230208,112230626,112233163,112233432	112226526,112228673,112230230,112230682,112233233,112233973	Gene ID= ENSG00000150787.7 TPM= 1.93 Transcript Type= protein_coding
chr11	112226365	112233810	112226365	112233810	+	transcript5142.chr11.nnic@PTS	transcript5142.chr11.nnic	protein_coding	112226365,112228594,112230208,112230626,112233163,112233432	112226526,112229486,112230230,112230682,112233233,112233810	Gene ID= ENSG00000150787.7 TPM= 2.25 Transcript Type= NA
chr11	112226367	112233909	112226367	112233909	+	ENST00000528679.5@PTS	ENST00000528679.5	protein_coding	112226367,112228594,112230626,112233163,112233432	112226526,112228673,112230682,112233233,112233909	Gene ID= ENSG00000150787.7 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr11	112226380	112227073	112226380	112227073	+	transcript5145.chr11.nnic@NA	transcript5145.chr11.nnic	NA	112226380	112227073	Gene ID= novel_gene_chr11_5146 TPM= 1.93 Transcript Type= NA
chr11	112290201	112292721	112290201	112292721	+	ENST00000419895.3@AP002884.3	ENST00000419895.3	lincRNA	112290201,112291320	112290509,112292721	Gene ID= ENSG00000250303.3 TPM= 7.72 Transcript Type= lincRNA
chr11	112290268	112292170	112290268	112292170	+	ENST00000529938.1@AP002884.3	ENST00000529938.1	lincRNA	112290268,112291247	112290509,112292170	Gene ID= ENSG00000250303.3 TPM= 5.79 Transcript Type= lincRNA
chr11	113314543	113373294	113314543	113373294	+	transcript5150.chr11.nnic@TTC12	transcript5150.chr11.nnic	protein_coding	113314543,113316243,113323288,113323994,113324605,113325524,113329920,113334966,113338774,113339286,113340664,113341837,113344272,113350073,113351239,113352070,113359363,113359940,113362401,113363828,113364835,113368187,113368374,113373124	113314618,113316315,113323451,113324015,113324682,113325645,113329979,113335037,113338834,113339474,113340733,113341925,113344440,113350165,113351299,113352207,113359461,113360008,113362502,113363927,113365060,113368258,113368463,113373294	Gene ID= ENSG00000149292.16 TPM= 1.93 Transcript Type= NA
chr11	113314529	113366392	113314529	113366392	+	ENST00000529221.5@TTC12	ENST00000529221.5	protein_coding	113314529,113316243,113323288,113323994,113324605,113325524,113329920,113334966,113338774,113339286,113340664,113341837,113344272,113350073,113351239,113352070,113359363,113359940,113362401,113363828,113364835,113366225	113314618,113316315,113323451,113324015,113324682,113325645,113329979,113335037,113338834,113339474,113340733,113341925,113344440,113350165,113351299,113352207,113359461,113360008,113362502,113363927,113365060,113366392	Gene ID= ENSG00000149292.16 TPM= 3.86 Transcript Type= protein_coding
chr11	113733187	113773811	113733187	113773811	-	ENST00000200135.7@ZW10	ENST00000200135.7	protein_coding	113773562,113768833,113760817,113760513,113760209,113758554,113757662,113748257,113747531,113743802,113741694,113739213,113738264,113737572,113736620,113733187	113773811,113768967,113760918,113760590,113760368,113758706,113757853,113748420,113747713,113744040,113741765,113739382,113738394,113737703,113736822,113733814	Gene ID= ENSG00000086827.8 TPM= 23.65 Transcript Type= protein_coding
chr11	113733187	113773711	113733187	113773711	-	transcript5159.chr11.nnic@ZW10	transcript5159.chr11.nnic	protein_coding	113773562,113768833,113760817,113760513,113760209,113758554,113748257,113747531,113743802,113741694,113739213,113738264,113737572,113736620,113733187	113773711,113768967,113760918,113760590,113760368,113758706,113748420,113747713,113744040,113741765,113739382,113738394,113737703,113736822,113733814	Gene ID= ENSG00000086827.8 TPM= 3.38 Transcript Type= NA
chr11	113798092	113875569	113798092	113875569	-	transcript5172.chr11.nnic@USP28	transcript5172.chr11.nnic	protein_coding	113875445,113854258,113852501,113841663,113840598,113834249,113833420,113831920,113830867,113829197,113827233,113823605,113817658,113815174,113813885,113812276,113809063,113808298,113807951,113806489,113804868,113804673,113803798,113803158,113801483,113798092	113875569,113854335,113852633,113841768,113840757,113834335,113833557,113831993,113830943,113829345,113827360,113823700,113817837,113815382,113813955,113812504,113809254,113808437,113808136,113806584,113805046,113804751,113803877,113803281,113801678,113799415	Gene ID= ENSG00000048028.11 TPM= 8.69 Transcript Type= NA
chr11	113797874	113875570	113797874	113875570	-	ENST00000003302.8@USP28	ENST00000003302.8	protein_coding	113875445,113854258,113852501,113841663,113840598,113834249,113833420,113831920,113830867,113829197,113827233,113823605,113817658,113815174,113813885,113812276,113809063,113808298,113806489,113804868,113804673,113803798,113803158,113801483,113797874	113875570,113854335,113852633,113841768,113840757,113834335,113833557,113831993,113830943,113829345,113827360,113823700,113817837,113815382,113813955,113812504,113809254,113808437,113806584,113805046,113804751,113803877,113803281,113801678,113799415	Gene ID= ENSG00000048028.11 TPM= 21.24 Transcript Type= protein_coding
chr11	113832103	113875569	113832103	113875569	-	transcript5187.chr11.nic@USP28	transcript5187.chr11.nic	protein_coding	113875445,113854258,113852501,113841663,113840598,113834249,113832103	113875569,113854335,113852633,113841768,113840757,113834335,113833557	Gene ID= ENSG00000048028.11 TPM= 1.93 Transcript Type= NA
chr11	113813755	113875528	113813755	113875528	-	ENST00000537706.5@USP28	ENST00000537706.5	protein_coding	113875445,113854258,113852501,113841663,113840598,113834249,113833420,113831920,113830867,113829197,113827233,113823605,113817658,113815174,113813755	113875528,113854335,113852633,113841768,113840757,113834335,113833557,113831993,113830943,113829345,113827360,113823700,113817837,113815382,113813955	Gene ID= ENSG00000048028.11 TPM= 2.9 Transcript Type= protein_coding
chr11	113872349	113874447	113872349	113874447	+	transcript5190.chr11.nnic@NA	transcript5190.chr11.nnic	NA	113872349	113874447	Gene ID= novel_gene_chr11_5191 TPM= 18.34 Transcript Type= NA
chr11	114055587	114057424	114055587	114057424	-	transcript5192.chr11.nnic@NA	transcript5192.chr11.nnic	NA	114055587	114057424	Gene ID= novel_gene_chr11_5193 TPM= 1.93 Transcript Type= NA
chr11	114058462	114059320	114058462	114059320	+	transcript5249.chr11.nnic@NA	transcript5249.chr11.nnic	NA	114058462	114059320	Gene ID= novel_gene_chr11_5250 TPM= 17.38 Transcript Type= NA
chr11	114059876	114250652	114059876	114250652	+	transcript5205.chr11.nnic@ZBTB16	transcript5205.chr11.nnic	protein_coding	114059876,114063211,114156337,114186952,114242167,114247198,114250326	114062833,114064568,114156434,114187038,114242337,114247365,114250652	Gene ID= ENSG00000109906.13 TPM= 127.91 Transcript Type= NA
chr11	114177653	114250652	114177653	114250652	+	transcript5231.chr11.nnic@ZBTB16	transcript5231.chr11.nnic	protein_coding	114177653,114186952,114242167,114247198,114250326	114178148,114187038,114242337,114247365,114250652	Gene ID= ENSG00000109906.13 TPM= 17.62 Transcript Type= NA
chr11	114059645	114068076	114059645	114068076	+	transcript5243.chr11.nic@ZBTB16	transcript5243.chr11.nic	protein_coding	114059645,114063211	114059882,114068076	Gene ID= ENSG00000109906.13 TPM= 24.13 Transcript Type= NA
chr11	114059593	114250676	114059593	114250676	+	ENST00000335953.8@ZBTB16	ENST00000335953.8	protein_coding	114059593,114063211,114156337,114186952,114242167,114247198,114250326	114059882,114064568,114156434,114187038,114242337,114247365,114250676	Gene ID= ENSG00000109906.13 TPM= 555.75 Transcript Type= protein_coding
chr11	114059725	114189764	114059725	114189764	+	ENST00000541602.5@ZBTB16	ENST00000541602.5	protein_coding	114059725,114063211,114156337,114186952	114059882,114064568,114156434,114189764	Gene ID= ENSG00000109906.13 TPM= 3.86 Transcript Type= retained_intron
chr11	114060507	114250652	114060507	114250652	+	ENST00000392996.2@ZBTB16	ENST00000392996.2	protein_coding	114060507,114063211,114156337,114186952,114242167,114247198,114250326	114060584,114064568,114156434,114187038,114242337,114247365,114250652	Gene ID= ENSG00000109906.13 TPM= 7.93 Transcript Type= protein_coding
chr11	114070806	114072900	114070806	114072900	+	transcript5261.chr11.nnic@NA	transcript5261.chr11.nnic	NA	114070806	114072900	Gene ID= novel_gene_chr11_5262 TPM= 4.83 Transcript Type= NA
chr11	114078951	114082130	114078951	114082130	+	transcript5257.chr11.nnic@NA	transcript5257.chr11.nnic	NA	114078951	114082130	Gene ID= novel_gene_chr11_5258 TPM= 6.76 Transcript Type= NA
chr11	114163411	114164875	114163411	114164875	-	transcript5281.chr11.nnic@NA	transcript5281.chr11.nnic	NA	114163411	114164875	Gene ID= novel_gene_chr11_5282 TPM= 4.83 Transcript Type= NA
chr11	114250451	114254411	114250451	114254411	+	transcript5251.chr11.nnic@NA	transcript5251.chr11.nnic	NA	114250451	114254411	Gene ID= novel_gene_chr11_5252 TPM= 102.32 Transcript Type= NA
chr11	114295825	114312560	114295825	114312560	+	ENST00000299964.3@NNMT	ENST00000299964.3	protein_coding	114295825,114297951,114312045	114296710,114298158,114312560	Gene ID= ENSG00000166741.7 TPM= 207.06 Transcript Type= protein_coding
chr11	114296418	114312515	114296418	114312515	+	transcript5288.chr11.nic@NNMT	transcript5288.chr11.nic	protein_coding	114296418,114297951,114312045	114296710,114298194,114312515	Gene ID= ENSG00000166741.7 TPM= 12.07 Transcript Type= NA
chr11	114312607	114313534	114312607	114313534	+	transcript5291.chr11.nnic@NA	transcript5291.chr11.nnic	NA	114312607	114313534	Gene ID= novel_gene_chr11_5292 TPM= 1.93 Transcript Type= NA
chr11	114398532	114400511	114398532	114400511	-	ENST00000623205.2@C11orf71	ENST00000623205.2	protein_coding	114398532	114400511	Gene ID= ENSG00000180425.11 TPM= 2.9 Transcript Type= protein_coding
chr11	114400030	114410607	114400030	114410607	+	ENST00000540163.5@RBM7	ENST00000540163.5	protein_coding	114400030,114401698,114402828,114405709,114407445	114400767,114401860,114402915,114405799,114410607	Gene ID= ENSG00000076053.10 TPM= 5.79 Transcript Type= protein_coding
chr11	114400529	114408924	114400529	114408924	+	ENST00000375490.9@RBM7	ENST00000375490.9	protein_coding	114400529,114401698,114402828,114405706,114407445	114400767,114401860,114402915,114405799,114408924	Gene ID= ENSG00000076053.10 TPM= 19.31 Transcript Type= protein_coding
chr11	114439474	114450279	114439474	114450279	+	transcript5313.chr11.nic@REXO2	transcript5313.chr11.nic	protein_coding	114439474,114440656,114443856,114447826,114449846	114439675,114440739,114446087,114447879,114450279	Gene ID= ENSG00000076043.9 TPM= 2.9 Transcript Type= NA
chr11	114439482	114445611	114439482	114445611	+	transcript5316.chr11.nnic@REXO2	transcript5316.chr11.nnic	protein_coding	114439482,114440656,114443856,114444155	114439675,114440739,114443933,114445611	Gene ID= ENSG00000076043.9 TPM= 7.72 Transcript Type= NA
chr11	115173625	115504523	115173625	115504523	-	ENST00000542447.6@CADM1	ENST00000542447.6	protein_coding	115504271,115240274,115238500,115231353,115229113,115217892,115214608,115178644,115173625	115504523,115240420,115238652,115231490,115229271,115217991,115214780,115178775,115176592	Gene ID= ENSG00000182985.17 TPM= 1.93 Transcript Type= protein_coding
chr11	116748170	116772988	116748170	116772988	-	ENST00000260210.4@BUD13	ENST00000260210.4	protein_coding	116772822,116770129,116765362,116762553,116760735,116759074,116758269,116757766,116757146,116748170	116772988,116770222,116765446,116763266,116760952,116759179,116758407,116757950,116757227,116748575	Gene ID= ENSG00000137656.11 TPM= 23.17 Transcript Type= protein_coding
chr11	116778560	116788028	116778560	116788028	-	transcript5333.chr11.nic@ZPR1	transcript5333.chr11.nic	protein_coding	116787820,116787482,116786969,116786511,116785796,116785514,116785099,116784859,116784378,116783530,116782919,116782158,116779772,116778560	116788028,116787643,116787059,116786581,116785882,116785636,116785146,116784921,116784498,116783619,116783029,116782244,116779837,116779059	Gene ID= ENSG00000109917.10 TPM= 5.79 Transcript Type= NA
chr11	116869525	117098442	116869525	117098442	-	transcript5344.chr11.nic@SIK3	transcript5344.chr11.nic	protein_coding	117098143,116956948,116954044,116927219,116897193,116896253,116876924,116876253,116875866,116875374,116875158,116873903,116873481,116869525	117098442,116957064,116954107,116927380,116897317,116896376,116877042,116876363,116876009,116875451,116875267,116874056,116873636,116870401	Gene ID= ENSG00000160584.15 TPM= 8.04 Transcript Type= NA
chr11	116869525	117098442	116869525	117098442	-	transcript5347.chr11.nic@SIK3	transcript5347.chr11.nic	protein_coding	117098143,116956948,116954044,116927219,116897193,116896253,116876924,116876253,116875374,116875158,116873903,116873481,116869525	117098442,116957064,116954107,116927380,116897317,116896376,116877042,116876363,116875451,116875267,116874056,116873636,116870401	Gene ID= ENSG00000160584.15 TPM= 4.18 Transcript Type= NA
chr11	116843402	117098421	116843402	117098421	-	ENST00000375300.5@SIK3	ENST00000375300.5	protein_coding	117098143,116956948,116954044,116927219,116897193,116896253,116876924,116876253,116875866,116875374,116875158,116873903,116873481,116870331,116863668,116862202,116861841,116861274,116859265,116857810,116849120,116847476,116846383,116843402	117098421,116957064,116954107,116927380,116897317,116896376,116877042,116876363,116876009,116875451,116875267,116874056,116873636,116870401,116863818,116862327,116861926,116861383,116859604,116858699,116849283,116847608,116846553,116845629	Gene ID= ENSG00000160584.15 TPM= 25.42 Transcript Type= protein_coding
chr11	117144267	117171048	117144267	117171048	+	ENST00000527958.5@PAFAH1B2	ENST00000527958.5	protein_coding	117144267,117152441,117159934,117161145,117163770,117167421	117144418,117152528,117160023,117161261,117163892,117171048	Gene ID= ENSG00000168092.13 TPM= 93.64 Transcript Type= protein_coding
chr11	117205074	117232604	117205074	117232604	-	transcript5363.chr11.nnic@PCSK7	transcript5363.chr11.nnic	protein_coding	117232027,117230349,117229377,117228216,117227157,117224701,117224078,117223208,117219591,117219057,117218466,117208897,117207970,117207067,117206681,117205074	117232604,117230468,117229856,117228350,117227322,117224755,117224216,117223308,117219758,117219164,117218568,117209053,117208064,117207160,117206798,117206356	Gene ID= ENSG00000160613.12 TPM= 7.72 Transcript Type= NA
chr11	117205074	117232526	117205074	117232526	-	transcript5364.chr11.nnic@PCSK7	transcript5364.chr11.nnic	protein_coding	117232027,117230349,117229377,117228216,117227157,117225931,117224701,117224078,117223208,117219591,117219057,117218466,117207970,117207067,117206681,117205074	117232526,117230468,117229856,117228350,117227322,117226021,117224755,117224216,117223308,117219758,117219164,117218568,117208064,117207160,117206798,117206356	Gene ID= ENSG00000160613.12 TPM= 4.83 Transcript Type= NA
chr11	117205074	117232604	117205074	117232604	-	transcript5366.chr11.nic@PCSK7	transcript5366.chr11.nic	protein_coding	117232027,117230349,117229377,117228216,117227157,117225931,117224701,117224078,117223208,117219591,117219057,117218466,117208897,117207970,117206681,117205074	117232604,117230468,117229856,117228350,117227322,117226021,117224755,117224216,117223308,117219758,117219164,117218568,117209053,117208064,117206798,117206356	Gene ID= ENSG00000160613.12 TPM= 2.9 Transcript Type= NA
chr11	117216434	117232527	117216434	117232527	-	transcript5375.chr11.nic@PCSK7	transcript5375.chr11.nic	protein_coding	117232027,117230349,117229377,117228216,117227157,117225931,117224701,117224078,117223208,117219591,117219057,117216434	117232527,117230468,117229856,117228350,117227322,117226021,117224755,117224216,117223308,117219758,117219164,117218568	Gene ID= ENSG00000160613.12 TPM= 1.93 Transcript Type= NA
chr11	117226142	117232083	117226142	117232083	-	transcript5390.chr11.nic@PCSK7	transcript5390.chr11.nic	protein_coding	117232027,117230349,117229377,117228216,117226142	117232083,117230468,117229856,117228350,117227322	Gene ID= ENSG00000160613.12 TPM= 1.93 Transcript Type= NA
chr11	117232736	117285688	117232736	117285688	+	ENST00000531452.5@RNF214	ENST00000531452.5	protein_coding	117232736,117234267,117238601,117239801,117244445,117246809,117279908,117280171,117281314,117281600,117281894,117282404,117282746,117283115,117285086	117232775,117234379,117239111,117239860,117244585,117246948,117280004,117280259,117281404,117281698,117282270,117282536,117282850,117283210,117285688	Gene ID= ENSG00000167257.10 TPM= 1.93 Transcript Type= protein_coding
chr11	117232625	117285686	117232625	117285686	+	ENST00000300650.8@RNF214	ENST00000300650.8	protein_coding	117232625,117234267,117238601,117239801,117244445,117246809,117279908,117280171,117281314,117281600,117281894,117282404,117282746,117283115,117285086	117232726,117234379,117239111,117239860,117244585,117246948,117280004,117280259,117281404,117281698,117282270,117282536,117282850,117283210,117285686	Gene ID= ENSG00000167257.10 TPM= 7.72 Transcript Type= protein_coding
chr11	117290463	117293568	117290463	117293568	+	transcript5392.chr11.nnic@NA	transcript5392.chr11.nnic	NA	117290463	117293568	Gene ID= novel_gene_chr11_5393 TPM= 16.41 Transcript Type= NA
chr11	117986348	118001479	117986348	118001479	+	ENST00000227752.7@IL10RA	ENST00000227752.7	protein_coding	117986348,117988382,117989442,117993241,117993999,117995589,117998715	117986534,117988502,117989620,117993410,117994149,117995710,118001479	Gene ID= ENSG00000110324.10 TPM= 6.76 Transcript Type= protein_coding
chr11	118133377	118152820	118133377	118152820	-	ENST00000324727.8@SCN4B	ENST00000324727.8	protein_coding	118152613,118145057,118143833,118141207,118133377	118152820,118145229,118144061,118141336,118137120	Gene ID= ENSG00000177098.8 TPM= 20.27 Transcript Type= protein_coding
chr11	118253403	118264282	118253403	118264282	-	ENST00000278937.6@MPZL2	ENST00000278937.6	protein_coding	118264096,118262931,118262438,118260054,118257238,118253403	118264282,118263097,118262648,118260201,118257313,118255233	Gene ID= ENSG00000149573.8 TPM= 6.76 Transcript Type= protein_coding
chr11	118359585	118399211	118359585	118399211	+	ENST00000252108.7@UBE4A	ENST00000252108.7	protein_coding	118359585,118365040,118368631,118369423,118371514,118372507,118373086,118373494,118374896,118376574,118379446,118381391,118382589,118384635,118384832,118386438,118389725,118390657,118392738,118396314	118359674,118365201,118368804,118369535,118371666,118372666,118373288,118373685,118375229,118376694,118379750,118381523,118382776,118384735,118384945,118386612,118389905,118390804,118392895,118399211	Gene ID= ENSG00000110344.9 TPM= 40.54 Transcript Type= protein_coding
chr11	118401154	118409851	118401154	118409851	+	ENST00000300688.7@ATP5L	ENST00000300688.7	protein_coding	118401154,118406937,118409000	118401717,118407097,118409851	Gene ID= ENSG00000167283.7 TPM= 312.76 Transcript Type= protein_coding
chr11	118401633	118409199	118401633	118409199	+	ENST00000529460.1@ATP5L	ENST00000529460.1	protein_coding	118401633,118406937,118409000	118401728,118407097,118409199	Gene ID= ENSG00000167283.7 TPM= 16.41 Transcript Type= processed_transcript
chr11	118401592	118431659	118401592	118431659	+	transcript5428.chr11.nnic@ATP5L	transcript5428.chr11.nnic	protein_coding	118401592,118431024	118401717,118431659	Gene ID= ENSG00000167283.7 TPM= 1.93 Transcript Type= NA
chr11	118403721	118405901	118403721	118405901	-	transcript5429.chr11.nnic@NA	transcript5429.chr11.nnic	NA	118403721	118405901	Gene ID= novel_gene_chr11_5430 TPM= 1.93 Transcript Type= NA
chr11	118472617	118482483	118472617	118482483	+	transcript5431.chr11.nic@KMT2A	transcript5431.chr11.nic	protein_coding	118472617,118476805,118477967,118480174,118481715,118482422	118474315,118476982,118478201,118480238,118482092,118482483	Gene ID= ENSG00000118058.20 TPM= 4.83 Transcript Type= NA
chr11	118530170	118531151	118530170	118531151	-	transcript5447.chr11.nnic@NA	transcript5447.chr11.nnic	NA	118530170	118531151	Gene ID= novel_gene_chr11_5448 TPM= 2.9 Transcript Type= NA
chr11	118531209	118535835	118531209	118535835	+	ENST00000313236.9@TMEM25	ENST00000313236.9	protein_coding	118531209,118531775,118532150,118532917,118533420,118533857,118534029,118534266,118534507	118531234,118531871,118532461,118533207,118533551,118533887,118534129,118534355,118535835	Gene ID= ENSG00000149582.15 TPM= 4.83 Transcript Type= protein_coding
chr11	118544528	118566076	118544528	118566076	-	ENST00000264021.7@IFT46	ENST00000264021.7	protein_coding	118565790,118564965,118559785,118556906,118555248,118554990,118554459,118552214,118551786,118545793,118545409,118544528	118566076,118565061,118559864,118557045,118555322,118555083,118554587,118552335,118551852,118545853,118545494,118545011	Gene ID= ENSG00000118096.7 TPM= 10.14 Transcript Type= protein_coding
chr11	118544543	118566035	118544543	118566035	-	ENST00000264020.6@IFT46	ENST00000264020.6	protein_coding	118565790,118564965,118559785,118557738,118556906,118555248,118554990,118554459,118552214,118551786,118545793,118545409,118544543	118566035,118565061,118559864,118557890,118557045,118555322,118555083,118554587,118552335,118551852,118545853,118545494,118545011	Gene ID= ENSG00000118096.7 TPM= 3.38 Transcript Type= protein_coding
chr11	118572453	118602928	118572453	118602928	+	ENST00000264028.4@ARCN1	ENST00000264028.4	protein_coding	118572453,118581246,118583179,118583809,118584480,118590341,118592709,118593590,118597707,118600625	118572550,118581509,118583358,118584014,118584644,118590506,118592856,118593698,118597911,118602928	Gene ID= ENSG00000095139.13 TPM= 29.92 Transcript Type= protein_coding
chr11	118607643	118658025	118607643	118658025	+	ENST00000356063.9@PHLDB1	ENST00000356063.9	protein_coding	118607643,118613816,118614559,118616041,118624934,118627305,118631207,118631913,118632159,118635393,118638891,118639162,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683	118607699,118613896,118614682,118616211,118625059,118628650,118631479,118632053,118632296,118635548,118639001,118639251,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658025	Gene ID= ENSG00000019144.18 TPM= 9.97 Transcript Type= protein_coding
chr11	118634953	118658025	118634953	118658025	+	transcript5457.chr11.nic@PHLDB1	transcript5457.chr11.nic	protein_coding	118634953,118638891,118639162,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683	118635548,118639001,118639251,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658025	Gene ID= ENSG00000019144.18 TPM= 9.49 Transcript Type= NA
chr11	118635051	118658025	118635051	118658025	+	transcript5458.chr11.nic@PHLDB1	transcript5458.chr11.nic	protein_coding	118635051,118638891,118639162,118643800,118644072,118647930,118650077,118650445,118655605,118656683	118635548,118639001,118639251,118643940,118645825,118648076,118650193,118650547,118655690,118658025	Gene ID= ENSG00000019144.18 TPM= 7.56 Transcript Type= NA
chr11	118751935	118791183	118751935	118791183	-	transcript5474.chr11.nnic@DDX6	transcript5474.chr11.nnic	protein_coding	118791098,118786052,118781121,118779632,118768223,118765209,118763212,118759922,118757171,118756260,118755402,118754705,118751935	118791183,118786518,118781184,118779736,118768352,118765355,118763306,118760044,118757287,118756323,118755503,118754887,118752097	Gene ID= ENSG00000110367.11 TPM= 1.93 Transcript Type= NA
chr11	118747766	118790948	118747766	118790948	-	ENST00000620157.4@DDX6	ENST00000620157.4	protein_coding	118790855,118786052,118781121,118779632,118768223,118765209,118763212,118759922,118758774,118757171,118756260,118755402,118754705,118747766	118790948,118786518,118781184,118779736,118768352,118765355,118763306,118760044,118758902,118757287,118756323,118755503,118754887,118752097	Gene ID= ENSG00000110367.11 TPM= 65.64 Transcript Type= protein_coding
chr11	118781839	118783822	118781839	118783822	+	transcript5475.chr11.nnic@NA	transcript5475.chr11.nnic	NA	118781839	118783822	Gene ID= novel_gene_chr11_5476 TPM= 2.9 Transcript Type= NA
chr11	118791025	118793137	118791025	118793137	+	transcript5479.chr11.nnic@NA	transcript5479.chr11.nnic	NA	118791025	118793137	Gene ID= novel_gene_chr11_5480 TPM= 1.93 Transcript Type= NA
chr11	118791064	118791536	118791064	118791536	+	transcript5477.chr11.nnic@NA	transcript5477.chr11.nnic	NA	118791064	118791536	Gene ID= novel_gene_chr11_5478 TPM= 6.76 Transcript Type= NA
chr11	118896135	118898319	118896135	118898319	-	transcript5483.chr11.nnic@NA	transcript5483.chr11.nnic	NA	118896135	118898319	Gene ID= novel_gene_chr11_5484 TPM= 53.09 Transcript Type= NA
chr11	118998142	119015745	118998142	119015745	+	ENST00000334418.5@CCDC84	ENST00000334418.5	protein_coding	118998142,118998430,118999011,119010764,119011221,119011939,119012149,119013232,119014994,119015307,119015538	118998317,118998593,118999109,119010830,119011283,119012003,119012254,119013262,119015083,119015439,119015745	Gene ID= ENSG00000186166.8 TPM= 1.93 Transcript Type= protein_coding
chr11	119006077	119007334	119006077	119007334	-	transcript5506.chr11.nnic@NA	transcript5506.chr11.nnic	NA	119006077	119007334	Gene ID= novel_gene_chr11_5507 TPM= 15.44 Transcript Type= NA
chr11	119015712	119018678	119015712	119018678	-	ENST00000527791.5@RPS25	ENST00000527791.5	protein_coding	119018282,119017958,119017362,119015841,119015712	119018678,119018053,119017433,119015939,119015758	Gene ID= ENSG00000118181.10 TPM= 14.38 Transcript Type= nonsense_mediated_decay
chr11	119015712	119018690	119015712	119018690	-	ENST00000527673.1@RPS25	ENST00000527673.1	protein_coding	119018282,119017958,119017362,119015841,119015712	119018690,119018053,119017545,119015939,119015758	Gene ID= ENSG00000118181.10 TPM= 1162.62 Transcript Type= protein_coding
chr11	119015712	119018330	119015712	119018330	-	ENST00000532567.5@RPS25	ENST00000532567.5	protein_coding	119018282,119017925,119017362,119015841,119015712	119018330,119018053,119017545,119015939,119015758	Gene ID= ENSG00000118181.10 TPM= 108.98 Transcript Type= nonsense_mediated_decay
chr11	119018432	119024134	119018432	119024134	+	ENST00000533632.5@TRAPPC4	ENST00000533632.5	protein_coding	119018432,119019143,119020150,119021760,119023321	119018970,119019317,119020253,119021886,119024134	Gene ID= ENSG00000196655.11 TPM= 32.82 Transcript Type= protein_coding
chr11	119024356	119030449	119024356	119030449	-	transcript5508.chr11.nic@SLC37A4	transcript5508.chr11.nic	protein_coding	119030232,119029222,119028194,119027726,119027628,119026937,119026603,119025967,119025692,119025191,119024356	119030449,119029564,119028426,119027872,119027724,119027095,119026688,119026080,119025757,119025329,119025076	Gene ID= ENSG00000137700.17 TPM= 18.02 Transcript Type= NA
chr11	119024356	119030908	119024356	119030908	-	transcript5509.chr11.nic@SLC37A4	transcript5509.chr11.nic	protein_coding	119030849,119029222,119028194,119027726,119027628,119026937,119026603,119025967,119025692,119025191,119024356	119030908,119029564,119028426,119027872,119027724,119027095,119026688,119026080,119025757,119025329,119025076	Gene ID= ENSG00000137700.17 TPM= 22.85 Transcript Type= NA
chr11	119024356	119030908	119024356	119030908	-	transcript5511.chr11.nic@SLC37A4	transcript5511.chr11.nic	protein_coding	119030849,119029222,119028194,119027628,119026937,119026603,119025967,119025692,119025191,119024356	119030908,119029564,119028426,119027872,119027095,119026688,119026080,119025757,119025329,119025076	Gene ID= ENSG00000137700.17 TPM= 31.54 Transcript Type= NA
chr11	119024388	119030880	119024388	119030880	-	ENST00000527992.5@SLC37A4	ENST00000527992.5	protein_coding	119030849,119029222,119028194,119027628,119026937,119026603,119025967,119025191,119024388	119030880,119029564,119028426,119027872,119027095,119026688,119026080,119025329,119025076	Gene ID= ENSG00000137700.17 TPM= 2.9 Transcript Type= processed_transcript
chr11	119044189	119057235	119044189	119057235	-	transcript5515.chr11.nic@HYOU1	transcript5515.chr11.nic	protein_coding	119057153,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119049018,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044189	119057235,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119049203,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654	Gene ID= ENSG00000149428.18 TPM= 8.21 Transcript Type= NA
chr11	119044192	119057157	119044192	119057157	-	ENST00000612687.4@HYOU1	ENST00000612687.4	protein_coding	119057020,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044192	119057157,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654	Gene ID= ENSG00000149428.18 TPM= 3.86 Transcript Type= protein_coding
chr11	119044189	119057137	119044189	119057137	-	ENST00000617285.4@HYOU1	ENST00000617285.4	protein_coding	119057020,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119049018,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044189	119057137,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119049203,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654	Gene ID= ENSG00000149428.18 TPM= 15.93 Transcript Type= protein_coding
chr11	119067692	119081978	119067692	119081978	+	ENST00000621676.4@VPS11	ENST00000621676.4	protein_coding	119067692,119069196,119069442,119070234,119071596,119073198,119073800,119076897,119077501,119077878,119078173,119078565,119078795,119079129,119081092,119081459	119068010,119069344,119069577,119070397,119071843,119073399,119073951,119077083,119077647,119078066,119078334,119078704,119078997,119079300,119081314,119081978	Gene ID= ENSG00000160695.14 TPM= 27.03 Transcript Type= protein_coding
chr11	119067821	119081967	119067821	119081967	+	ENST00000614944.4@VPS11	ENST00000614944.4	protein_coding	119067821,119069173,119069442,119070234,119071596,119073198,119073800,119076897,119077501,119077878,119078173,119078565,119078795,119079129,119081092,119081459	119068202,119069344,119069577,119070397,119071843,119073399,119073951,119077083,119077647,119078066,119078334,119078704,119078997,119079300,119081314,119081967	Gene ID= ENSG00000160695.14 TPM= 5.79 Transcript Type= protein_coding
chr11	119084876	119093547	119084876	119093547	+	transcript5523.chr11.nnic@HMBS	transcript5523.chr11.nnic	protein_coding	119084876,119088255,119088546,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092404,119092758,119092935,119093110	119085066,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092163,119092523,119092811,119093021,119093547	Gene ID= ENSG00000256269.7 TPM= 2.58 Transcript Type= NA
chr11	119084882	119093547	119084882	119093547	+	transcript5528.chr11.nic@HMBS	transcript5528.chr11.nic	protein_coding	119084882,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092404,119092758,119092935,119093110	119085066,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092163,119092523,119092811,119093021,119093547	Gene ID= ENSG00000256269.7 TPM= 3.54 Transcript Type= NA
chr11	119084914	119093548	119084914	119093548	+	ENST00000544387.5@HMBS	ENST00000544387.5	protein_coding	119084914,119088255,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092758,119092935,119093110	119085066,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092163,119092811,119093021,119093548	Gene ID= ENSG00000256269.7 TPM= 7.72 Transcript Type= protein_coding
chr11	119084883	119093547	119084883	119093547	+	ENST00000278715.7@HMBS	ENST00000278715.7	protein_coding	119084883,119088255,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092404,119092758,119092935,119093110	119085066,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092163,119092523,119092811,119093021,119093547	Gene ID= ENSG00000256269.7 TPM= 30.57 Transcript Type= protein_coding
chr11	119093879	119095449	119093879	119095449	-	ENST00000375167.1@H2AFX	ENST00000375167.1	protein_coding	119094460,119093879	119095449,119094261	Gene ID= ENSG00000188486.3 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chr11	119093854	119095467	119093854	119095467	-	ENST00000530167.1@H2AFX	ENST00000530167.1	protein_coding	119093854	119095467	Gene ID= ENSG00000188486.3 TPM= 30.41 Transcript Type= protein_coding
chr11	119096507	119102142	119096507	119102142	-	ENST00000354202.8@DPAGT1	ENST00000354202.8	protein_coding	119101495,119101018,119100630,119100262,119098403,119097855,119097464,119097142,119096507	119102142,119101138,119100843,119100408,119098487,119098043,119097551,119097297,119097063	Gene ID= ENSG00000172269.18 TPM= 5.79 Transcript Type= protein_coding
chr11	119107342	119117117	119107342	119117117	+	transcript5539.chr11.nnic@C2CD2L	transcript5539.chr11.nnic	protein_coding	119107342,119110104,119110561,119110847,119111052,119111263,119111521,119112328,119112482,119112700,119113637,119113855,119114080,119116045	119108095,119110199,119110680,119110957,119111168,119111374,119111629,119112392,119112609,119112874,119113712,119113988,119114365,119117117	Gene ID= ENSG00000172375.12 TPM= 8.69 Transcript Type= NA
chr11	119121578	119135054	119121578	119135054	+	transcript5547.chr11.nnic@HINFP	transcript5547.chr11.nnic	protein_coding	119121578,119123568,119126935,119130725,119131535,119131830,119132496,119132661,119132864,119133095,119134084	119121639,119123684,119127125,119130954,119131646,119131982,119132573,119132781,119133002,119133219,119135054	Gene ID= ENSG00000172273.12 TPM= 3.38 Transcript Type= NA
chr11	119121569	119135054	119121569	119135054	+	transcript5550.chr11.nnic@HINFP	transcript5550.chr11.nnic	protein_coding	119121569,119126935,119130725,119131535,119131830,119132496,119132661,119132864,119133095,119134084	119121649,119127125,119130954,119131646,119131982,119132573,119132781,119133002,119133219,119135054	Gene ID= ENSG00000172273.12 TPM= 4.34 Transcript Type= NA
chr11	119121587	119136044	119121587	119136044	+	ENST00000350777.6@HINFP	ENST00000350777.6	protein_coding	119121587,119126935,119130725,119131535,119131830,119132496,119132661,119132864,119133095,119134084	119121639,119127125,119130954,119131646,119131982,119132573,119132781,119133002,119133219,119136044	Gene ID= ENSG00000172273.12 TPM= 2.9 Transcript Type= protein_coding
chr11	119168719	119184012	119168719	119184012	+	transcript5556.chr11.nic@NLRX1	transcript5556.chr11.nic	protein_coding	119168719,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119169042,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184012	Gene ID= ENSG00000160703.15 TPM= 29.79 Transcript Type= NA
chr11	119168719	119184016	119168719	119184016	+	transcript5557.chr11.nic@NLRX1	transcript5557.chr11.nic	protein_coding	119168719,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183821	119169042,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016	Gene ID= ENSG00000160703.15 TPM= 5.58 Transcript Type= NA
chr11	119168836	119184012	119168836	119184012	+	transcript5569.chr11.nic@NLRX1	transcript5569.chr11.nic	protein_coding	119168836,119171356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119169302,119171473,119172989,119174098,119175274,119180288,119181257,119182345,119184012	Gene ID= ENSG00000160703.15 TPM= 5.66 Transcript Type= NA
chr11	119168728	119184012	119168728	119184012	+	ENST00000409991.5@NLRX1	ENST00000409991.5	protein_coding	119168728,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119168894,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184012	Gene ID= ENSG00000160703.15 TPM= 17.24 Transcript Type= protein_coding
chr11	119168729	119184014	119168729	119184014	+	ENST00000292199.6@NLRX1	ENST00000292199.6	protein_coding	119168729,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119168921,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184014	Gene ID= ENSG00000160703.15 TPM= 11.45 Transcript Type= protein_coding
chr11	119168764	119184016	119168764	119184016	+	ENST00000409109.5@NLRX1	ENST00000409109.5	protein_coding	119168764,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119169302,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016	Gene ID= ENSG00000160703.15 TPM= 13.43 Transcript Type= protein_coding
chr11	119308529	119317116	119308529	119317116	-	ENST00000264036.5@MCAM	ENST00000264036.5	protein_coding	119317035,119315139,119314833,119314679,119314489,119312770,119312527,119312266,119312052,119311808,119311530,119311280,119311090,119310756,119310349,119308529	119317116,119315263,119315040,119314749,119314576,119312949,119312648,119312428,119312170,119311949,119311651,119311421,119311185,119310903,119310466,119309915	Gene ID= ENSG00000076706.16 TPM= 22.2 Transcript Type= protein_coding
chr11	119334527	119337313	119334527	119337313	+	ENST00000311413.4@RNF26	ENST00000311413.4	protein_coding	119334527	119337313	Gene ID= ENSG00000173456.4 TPM= 16.41 Transcript Type= protein_coding
chr11	119338939	119340883	119338939	119340883	-	ENST00000528368.2@C1QTNF5	ENST00000528368.2	protein_coding	119340695,119340184,119338939	119340883,119340440,119339848	Gene ID= ENSG00000223953.5 TPM= 17.86 Transcript Type= protein_coding
chr11	119338942	119346673	119338942	119346673	-	ENST00000619721.5@MFRP	ENST00000619721.5	protein_coding	119346460,119346272,119346046,119345773,119345420,119344874,119344632,119344315,119343816,119342873,119342596,119341857,119340695,119340184,119338942	119346673,119346374,119346159,119345928,119345633,119345004,119344757,119344391,119343964,119343003,119342727,119341984,119341772,119340440,119339848	Gene ID= ENSG00000235718.8 TPM= 19.79 Transcript Type= protein_coding
chr11	119355215	119379115	119355215	119379115	-	transcript5584.chr11.nic@USP2	transcript5584.chr11.nic	protein_coding	119379007,119372707,119360184,119359537,119359231,119359024,119358773,119358149,119357981,119357757,119357483,119357187,119355215	119379115,119373521,119360234,119359660,119359342,119359134,119358837,119358252,119358061,119357835,119357590,119357307,119356922	Gene ID= ENSG00000036672.15 TPM= 136.11 Transcript Type= NA
chr11	119355216	119381726	119355216	119381726	-	ENST00000260187.6@USP2	ENST00000260187.6	protein_coding	119381473,119372707,119360184,119359537,119359231,119359024,119358773,119358149,119357981,119357757,119357483,119357187,119355216	119381726,119373521,119360234,119359660,119359342,119359134,119358837,119358252,119358061,119357835,119357590,119357307,119356922	Gene ID= ENSG00000036672.15 TPM= 121.63 Transcript Type= protein_coding
chr11	119356772	119376314	119356772	119376314	-	transcript5587.chr11.nic@USP2	transcript5587.chr11.nic	protein_coding	119376224,119372707,119360184,119359537,119359231,119359024,119358773,119358149,119357981,119357757,119357483,119357187,119356772	119376314,119373521,119360234,119359660,119359342,119359134,119358837,119358252,119358061,119357835,119357590,119357307,119356922	Gene ID= ENSG00000036672.15 TPM= 7.72 Transcript Type= NA
chr11	119374440	119379081	119374440	119379081	-	transcript5592.chr11.nnic@USP2	transcript5592.chr11.nnic	protein_coding	119379007,119374440	119379081,119377467	Gene ID= ENSG00000036672.15 TPM= 5.79 Transcript Type= NA
chr11	119365900	119369093	119365900	119369093	-	transcript5593.chr11.nnic@NA	transcript5593.chr11.nnic	NA	119365900	119369093	Gene ID= novel_gene_chr11_5594 TPM= 2.9 Transcript Type= NA
chr11	119417378	119424128	119417378	119424128	-	ENST00000284240.9@THY1	ENST00000284240.9	protein_coding	119423113,119420869,119420051,119417378	119424128,119420929,119420386,119419520	Gene ID= ENSG00000154096.13 TPM= 3.86 Transcript Type= protein_coding
chr11	120210767	120230332	120210767	120230332	+	ENST00000328965.8@OAF	ENST00000328965.8	protein_coding	120210767,120225661,120226816,120228868	120211510,120225795,120226996,120230332	Gene ID= ENSG00000184232.8 TPM= 27.99 Transcript Type= protein_coding
chr11	121024121	121090775	121024121	121090775	+	ENST00000422003.6@TBCEL	ENST00000422003.6	protein_coding	121024121,121045674,121047528,121053551,121055052,121058345,121059969,121086778	121024291,121045823,121047667,121053732,121055308,121058471,121060085,121090775	Gene ID= ENSG00000154114.12 TPM= 3.86 Transcript Type= protein_coding
chr11	121292453	121308694	121292453	121308694	+	ENST00000264027.8@SC5D	ENST00000264027.8	protein_coding	121292453,121303366,121304361,121306386,121307057	121292816,121303585,121304493,121306486,121308694	Gene ID= ENSG00000109929.9 TPM= 1.93 Transcript Type= protein_coding
chr11	122089110	122100447	122089110	122100447	-	ENST00000524376.1@MIR100HG	ENST00000524376.1	processed_transcript	122100374,122089110	122100447,122091719	Gene ID= ENSG00000255248.7 TPM= 2.9 Transcript Type= lincRNA
chr11	122089110	122101029	122089110	122101029	-	ENST00000528986.1@MIR100HG	ENST00000528986.1	processed_transcript	122100374,122089110	122101029,122091740	Gene ID= ENSG00000255248.7 TPM= 1.93 Transcript Type= lincRNA
chr11	122655727	122811163	122655727	122811163	+	transcript5611.chr11.nnic@UBASH3B	transcript5611.chr11.nnic	protein_coding	122655727,122748936,122776219,122777024,122779497,122783053,122789100,122794702,122796156,122796911,122798942,122801188,122806410,122808067,122809749	122656210,122749201,122776272,122777210,122779695,122783222,122789308,122794834,122796276,122797033,122799034,122801332,122806516,122808176,122811163	Gene ID= ENSG00000154127.9 TPM= 2.9 Transcript Type= NA
chr11	122655675	122814473	122655675	122814473	+	ENST00000284273.5@UBASH3B	ENST00000284273.5	protein_coding	122655675,122776219,122777024,122779497,122783053,122789100,122794702,122796156,122796911,122798942,122801188,122806410,122808067,122809749	122656210,122776272,122777210,122779695,122783222,122789308,122794834,122796276,122797033,122799034,122801332,122806516,122808176,122814473	Gene ID= ENSG00000154127.9 TPM= 2.9 Transcript Type= protein_coding
chr11	123057489	123062335	123057489	123062335	-	ENST00000534624.5@HSPA8	ENST00000534624.5	protein_coding	123062064,123061120,123060593,123060116,123059473,123059059,123058632,123058252,123057489	123062335,123061329,123060798,123060268,123060028,123059261,123058830,123058484,123057919	Gene ID= ENSG00000109971.13 TPM= 5326.17 Transcript Type= protein_coding
chr11	123057489	123062335	123057489	123062335	-	ENST00000453788.6@HSPA8	ENST00000453788.6	protein_coding	123062064,123061120,123060593,123060116,123059473,123059059,123058767,123057489	123062335,123061329,123060798,123060268,123060028,123059261,123058830,123057828	Gene ID= ENSG00000109971.13 TPM= 108.18 Transcript Type= protein_coding
chr11	123057497	123061332	123057497	123061332	-	ENST00000227378.7@HSPA8	ENST00000227378.7	protein_coding	123061120,123060593,123060116,123059473,123059059,123058632,123058252,123057497	123061332,123060798,123060268,123060028,123059261,123058830,123058484,123057919	Gene ID= ENSG00000109971.13 TPM= 209.62 Transcript Type= protein_coding
chr11	123062635	123063229	123062635	123063229	+	transcript5654.chr11.nnic@NA	transcript5654.chr11.nnic	NA	123062635,123063039	123062697,123063229	Gene ID= novel_gene_chr11_5655 TPM= 3.86 Transcript Type= NA
chr11	123643697	123654626	123643697	123654626	-	transcript5660.chr11.nic@SCN3B	transcript5660.chr11.nic	protein_coding	123654226,123653747,123643697	123654626,123653826,123645750	Gene ID= ENSG00000166257.8 TPM= 1.93 Transcript Type= NA
chr11	123724345	123741617	123724345	123741617	-	transcript5661.chr11.nic@ZNF202	transcript5661.chr11.nic	protein_coding	123741549,123740417,123740117,123730487,123729615,123729126,123728133,123727476,123724345	123741617,123740536,123740232,123730985,123729825,123729214,123728262,123727595,123726991	Gene ID= ENSG00000166261.10 TPM= 1.93 Transcript Type= NA
chr11	124115362	124147721	124115362	124147721	+	ENST00000456829.6@VWA5A	ENST00000456829.6	protein_coding	124115362,124116566,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237,124134920,124136129,124136574,124137015,124141598,124142442,124145237,124145866	124115482,124116680,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124316,124135034,124136293,124136674,124137268,124141741,124142572,124145363,124147721	Gene ID= ENSG00000110002.15 TPM= 1.93 Transcript Type= protein_coding
chr11	124115404	124146909	124115404	124146909	+	ENST00000392748.5@VWA5A	ENST00000392748.5	protein_coding	124115404,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237,124134920,124136129,124136574,124137015,124141598,124142442,124145237,124145866	124115482,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124316,124135034,124136293,124136674,124137268,124141741,124142572,124145363,124146909	Gene ID= ENSG00000110002.15 TPM= 3.86 Transcript Type= protein_coding
chr11	124622836	124632434	124622836	124632434	+	ENST00000473629.6@TBRG1	ENST00000473629.6	protein_coding	124622836,124624931,124625671,124626813,124630388,124630745,124631275,124632093	124623233,124625001,124625903,124627050,124630485,124630855,124631417,124632434	Gene ID= ENSG00000154144.12 TPM= 6.76 Transcript Type= retained_intron
chr11	124622875	124635398	124622875	124635398	+	ENST00000284290.8@TBRG1	ENST00000284290.8	protein_coding	124622875,124624931,124625671,124626904,124630388,124630745,124631275,124632093	124623233,124625001,124625903,124627050,124630485,124630855,124631417,124635398	Gene ID= ENSG00000154144.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr11	124633113	124673881	124633113	124673881	-	ENST00000263593.7@SIAE	ENST00000263593.7	protein_coding	124673642,124669360,124660628,124654655,124649619,124648066,124647365,124639710,124638542,124633113	124673881,124669521,124660803,124654793,124649796,124648175,124647498,124639867,124638737,124637202	Gene ID= ENSG00000110013.12 TPM= 4.83 Transcript Type= protein_coding
chr11	124753123	124762284	124753123	124762284	-	ENST00000278927.9@ESAM	ENST00000278927.9	protein_coding	124762085,124758349,124756541,124756207,124754641,124754214,124753123	124762284,124758527,124756742,124756362,124754763,124754340,124753961	Gene ID= ENSG00000149564.11 TPM= 38.61 Transcript Type= protein_coding
chr11	124753123	124762280	124753123	124762280	-	ENST00000417453.5@ESAM	ENST00000417453.5	protein_coding	124762085,124758349,124756541,124756207,124754630,124754214,124753123	124762280,124758527,124756742,124756362,124754763,124754340,124753961	Gene ID= ENSG00000149564.11 TPM= 10.62 Transcript Type= nonsense_mediated_decay
chr11	124766498	124800673	124766498	124800673	-	ENST00000239614.8@MSANTD2	ENST00000239614.8	protein_coding	124799871,124774719,124772994,124766498	124800673,124774818,124773054,124768028	Gene ID= ENSG00000120458.10 TPM= 1.93 Transcript Type= protein_coding
chr11	124800433	124809573	124800433	124809573	+	transcript5701.chr11.nnic@AP000866.1	transcript5701.chr11.nnic	antisense_RNA	124800433,124801984,124804731,124805267,124807035	124800894,124802157,124804848,124805504,124809573	Gene ID= ENSG00000245498.6 TPM= 1.93 Transcript Type= NA
chr11	124800433	124806765	124800433	124806765	+	transcript5706.chr11.nnic@AP000866.1	transcript5706.chr11.nnic	antisense_RNA	124800433,124801984,124804731,124805267	124800894,124802157,124804848,124806765	Gene ID= ENSG00000245498.6 TPM= 1.93 Transcript Type= NA
chr11	125164706	125433389	125164706	125433389	+	ENST00000298282.13@PKNOX2	ENST00000298282.13	protein_coding	125164706,125235045,125331819,125351284,125367846,125385551,125397874,125410196,125410779,125411746,125429012,125429963,125431166	125164776,125235115,125331925,125351392,125367985,125385722,125398062,125410325,125410876,125411865,125429088,125430141,125433389	Gene ID= ENSG00000165495.15 TPM= 11.58 Transcript Type= protein_coding
chr11	125445761	125496310	125445761	125496310	-	ENST00000278919.7@FEZ1	ENST00000278919.7	protein_coding	125496121,125489467,125481534,125463484,125460498,125455835,125454130,125452334,125448502,125445761	125496310,125489822,125481633,125463570,125460666,125456106,125454210,125452409,125448567,125446111	Gene ID= ENSG00000149557.12 TPM= 1.93 Transcript Type= protein_coding
chr11	125569393	125584251	125569393	125584251	+	transcript5729.chr11.nic@EI24	transcript5729.chr11.nic	protein_coding	125569393,125570104,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521	125569573,125570190,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584251	Gene ID= ENSG00000149547.14 TPM= 3.86 Transcript Type= NA
chr11	125569216	125584687	125569216	125584687	+	ENST00000278903.10@EI24	ENST00000278903.10	protein_coding	125569216,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521	125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584687	Gene ID= ENSG00000149547.14 TPM= 107.15 Transcript Type= protein_coding
chr11	125569419	125584260	125569419	125584260	+	transcript5733.chr11.nnic@EI24	transcript5733.chr11.nnic	protein_coding	125569419,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125582346,125583196,125583521	125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125582420,125583321,125584260	Gene ID= ENSG00000149547.14 TPM= 8.69 Transcript Type= NA
chr11	125569458	125584209	125569458	125584209	+	ENST00000618552.4@EI24	ENST00000618552.4	protein_coding	125569458,125572458,125575251,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521	125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584209	Gene ID= ENSG00000149547.14 TPM= 75.29 Transcript Type= protein_coding
chr11	125569489	125584242	125569489	125584242	+	ENST00000527235.6@EI24	ENST00000527235.6	protein_coding	125569489,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125582346,125583521	125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125582420,125584242	Gene ID= ENSG00000149547.14 TPM= 35.72 Transcript Type= protein_coding
chr11	125592824	125621063	125592824	125621063	+	transcript5743.chr11.nnic@STT3A	transcript5743.chr11.nnic	protein_coding	125592824,125595881,125597059,125602303,125602803,125604157,125605629,125606301,125608109,125609434,125609710,125611428,125612592,125612989,125614087,125614324,125618373,125620011,125620772	125592918,125596003,125597119,125602424,125602948,125604247,125605735,125606465,125608289,125609589,125609780,125611519,125612747,125613177,125614203,125614426,125618561,125620126,125621063	Gene ID= ENSG00000134910.12 TPM= 2.9 Transcript Type= NA
chr11	125592867	125621374	125592867	125621374	+	transcript5744.chr11.nnic@STT3A	transcript5744.chr11.nnic	protein_coding	125592867,125594801,125595881,125597059,125602303,125602803,125604157,125605629,125606301,125608109,125609434,125611428,125612592,125612989,125614087,125614324,125618373,125620011,125620772	125592918,125595016,125596003,125597119,125602424,125602948,125604247,125605735,125606465,125608289,125609589,125611519,125612747,125613177,125614203,125614426,125618561,125620126,125621374	Gene ID= ENSG00000134910.12 TPM= 3.38 Transcript Type= NA
chr11	125592795	125623091	125592795	125623091	+	ENST00000392708.8@STT3A	ENST00000392708.8	protein_coding	125592795,125595881,125597059,125602303,125602803,125604157,125605629,125606301,125608109,125609434,125611428,125612592,125612989,125614087,125614324,125618373,125620011,125620772	125592918,125596003,125597119,125602424,125602948,125604247,125605735,125606465,125608289,125609589,125611519,125612747,125613177,125614203,125614426,125618561,125620126,125623091	Gene ID= ENSG00000134910.12 TPM= 9.17 Transcript Type= protein_coding
chr11	125610059	125611462	125610059	125611462	-	transcript5752.chr11.nnic@NA	transcript5752.chr11.nnic	NA	125610059	125611462	Gene ID= novel_gene_chr11_5753 TPM= 3.86 Transcript Type= NA
chr11	125887060	125900648	125887060	125900648	+	ENST00000425380.6@HYLS1	ENST00000425380.6	protein_coding	125887060,125891423,125899344	125887765,125891472,125900648	Gene ID= ENSG00000198331.10 TPM= 3.86 Transcript Type= protein_coding
chr11	125893716	125903207	125893716	125903207	-	transcript5754.chr11.nic@PUS3	transcript5754.chr11.nic	protein_coding	125903170,125900679,125895907,125895224,125893716	125903207,125900844,125896330,125895789,125894286	Gene ID= ENSG00000110060.8 TPM= 1.93 Transcript Type= NA
chr11	125893485	125903219	125893485	125903219	-	transcript5756.chr11.nnic@PUS3	transcript5756.chr11.nnic	protein_coding	125903170,125895907,125895670,125893485	125903219,125896330,125895789,125894286	Gene ID= ENSG00000110060.8 TPM= 1.93 Transcript Type= NA
chr11	125893486	125903221	125893486	125903221	-	ENST00000613398.4@PUS3	ENST00000613398.4	protein_coding	125903170,125895224,125893486	125903221,125895789,125894286	Gene ID= ENSG00000110060.8 TPM= 2.9 Transcript Type= protein_coding
chr11	125893716	125903209	125893716	125903209	-	transcript5768.chr11.nnic@PUS3	transcript5768.chr11.nnic	protein_coding	125903170,125893716	125903209,125894286	Gene ID= ENSG00000110060.8 TPM= 1.93 Transcript Type= NA
chr11	126202094	126211692	126202094	126211692	-	ENST00000298317.8@RPUSD4	ENST00000298317.8	protein_coding	126211450,126210890,126209521,126205688,126205468,126204231,126202094	126211692,126211055,126209722,126205781,126205612,126204328,126203657	Gene ID= ENSG00000165526.8 TPM= 72.4 Transcript Type= protein_coding
chr11	126211414	126262986	126211414	126262986	+	ENST00000533050.5@FAM118B	ENST00000533050.5	protein_coding	126211414,126229225,126234995,126240792,126250506,126254305,126256567,126261425,126262120	126211830,126229293,126235087,126241044,126250733,126254433,126256852,126261484,126262986	Gene ID= ENSG00000197798.8 TPM= 3.86 Transcript Type= protein_coding
chr11	126262919	126268959	126262919	126268959	-	ENST00000332118.10@SRPRA	ENST00000332118.10	protein_coding	126268688,126268003,126267549,126267175,126266763,126266476,126266187,126265963,126265737,126265268,126264959,126264376,126264191,126262919	126268959,126268086,126267712,126267335,126266922,126266629,126266278,126266081,126265823,126265440,126265172,126264539,126264289,126264044	Gene ID= ENSG00000182934.11 TPM= 73.85 Transcript Type= protein_coding
chr11	126262919	126268907	126262919	126268907	-	transcript5785.chr11.nnic@SRPRA	transcript5785.chr11.nnic	protein_coding	126268688,126268003,126267549,126267175,126266763,126266476,126266187,126265963,126265737,126265268,126264959,126264191,126262919	126268907,126268086,126267712,126267335,126266922,126266629,126266278,126266081,126265823,126265440,126265172,126264289,126264044	Gene ID= ENSG00000182934.11 TPM= 14 Transcript Type= NA
chr11	126263663	126267621	126263663	126267621	+	transcript5800.chr11.nnic@NA	transcript5800.chr11.nnic	NA	126263663	126267621	Gene ID= novel_gene_chr11_5801 TPM= 2.9 Transcript Type= NA
chr11	126269133	126278124	126269133	126278124	+	ENST00000263578.9@FOXRED1	ENST00000263578.9	protein_coding	126269133,126271437,126272969,126273336,126274927,126275327,126275794,126276059,126276394,126277071,126277435	126269291,126271657,126273079,126273454,126275021,126275428,126275870,126276219,126276523,126277175,126278124	Gene ID= ENSG00000110074.10 TPM= 18.34 Transcript Type= protein_coding
chr11	126283065	126293244	126283065	126293244	+	transcript5808.chr11.nic@TIRAP	transcript5808.chr11.nic	protein_coding	126283065,126290462,126290803,126292477	126283153,126290585,126290961,126293244	Gene ID= ENSG00000150455.13 TPM= 1.93 Transcript Type= NA
chr11	126294518	126297578	126294518	126297578	+	transcript5811.chr11.nnic@NA	transcript5811.chr11.nnic	NA	126294518	126297578	Gene ID= novel_gene_chr11_5812 TPM= 3.86 Transcript Type= NA
chr11	126303752	126345749	126303752	126345749	+	ENST00000263579.4@DCPS	ENST00000263579.4	protein_coding	126303752,126306570,126331405,126338286,126343307,126345347	126304281,126306744,126331550,126338399,126343417,126345749	Gene ID= ENSG00000110063.8 TPM= 11.58 Transcript Type= protein_coding
chr11	126355684	126414638	126355684	126414638	+	ENST00000444328.6@ST3GAL4	ENST00000444328.6	protein_coding	126355684,126406096,126406473,126406943,126407252,126407574,126408099,126408307,126409268,126413505,126413961	126355842,126406171,126406557,126407023,126407349,126407634,126408194,126408496,126409411,126413648,126414638	Gene ID= ENSG00000110080.18 TPM= 2.9 Transcript Type= protein_coding
chr11	128693770	128813267	128693770	128813267	+	ENST00000527786.6@FLI1	ENST00000527786.6	protein_coding	128693770,128758115,128768118,128772782,128781958,128805366,128807180,128809157,128810459	128694276,128758326,128768272,128772985,128782023,128805431,128807239,128809204,128813267	Gene ID= ENSG00000151702.16 TPM= 2.9 Transcript Type= protein_coding
chr11	130001393	130002471	130001393	130002471	-	transcript5840.chr11.nnic@NA	transcript5840.chr11.nnic	NA	130001393	130002471	Gene ID= novel_gene_chr11_5841 TPM= 4.83 Transcript Type= NA
chr11	130069873	130144804	130069873	130144804	+	transcript5847.chr11.nic@APLP2	transcript5847.chr11.nic	protein_coding	130069873,130109429,130110538,130120706,130121614,130122305,130126700,130127766,130129048,130130038,130133629,130135563,130137256,130140398,130141498,130141919,130143347	130070082,130109602,130110661,130120818,130121810,130122513,130126830,130127840,130129206,130130166,130133728,130135715,130137291,130140483,130141572,130142074,130144804	Gene ID= ENSG00000084234.16 TPM= 5.31 Transcript Type= NA
chr11	130069906	130144811	130069906	130144811	+	ENST00000263574.9@APLP2	ENST00000263574.9	protein_coding	130069906,130109429,130110538,130120706,130121614,130122305,130123612,130126700,130127766,130129048,130130038,130133629,130135563,130137256,130140398,130141498,130141919,130143347	130070082,130109602,130110661,130120818,130121810,130122513,130123779,130126830,130127840,130129206,130130166,130133728,130135715,130137291,130140483,130141572,130142074,130144811	Gene ID= ENSG00000084234.16 TPM= 12.07 Transcript Type= protein_coding
chr11	130069894	130143806	130069894	130143806	+	ENST00000528499.5@APLP2	ENST00000528499.5	protein_coding	130069894,130109429,130110538,130120706,130121614,130122305,130126700,130127766,130129048,130130038,130133629,130135563,130140398,130141498,130141919,130143347	130070082,130109602,130110661,130120818,130121810,130122513,130126830,130127840,130129206,130130166,130133728,130135715,130140483,130141572,130142074,130143806	Gene ID= ENSG00000084234.16 TPM= 4.83 Transcript Type= protein_coding
chr11	130259967	130314905	130259967	130314905	-	transcript5868.chr11.nic@ZBTB44	transcript5868.chr11.nic	protein_coding	130314375,130259967	130314905,130261929	Gene ID= ENSG00000196323.12 TPM= 5.79 Transcript Type= NA
chr11	130226678	130314686	130226678	130314686	-	ENST00000525842.5@ZBTB44	ENST00000525842.5	protein_coding	130314375,130260856,130239812,130238444,130237010,130226678	130314686,130261929,130239896,130238607,130237093,130234273	Gene ID= ENSG00000196323.12 TPM= 14.48 Transcript Type= protein_coding
chr11	130875436	130916509	130875436	130916509	-	ENST00000265909.8@SNX19	ENST00000265909.8	protein_coding	130914266,130911633,130910270,130910018,130907953,130906625,130905953,130903255,130880622,130879624,130875436	130916509,130911771,130910370,130910137,130908083,130906721,130906133,130903384,130880806,130879711,130878554	Gene ID= ENSG00000120451.10 TPM= 5.79 Transcript Type= protein_coding
chr11	130901643	130916475	130901643	130916475	-	transcript5878.chr11.nic@SNX19	transcript5878.chr11.nic	protein_coding	130914266,130911633,130910270,130910018,130907953,130906625,130905953,130903255,130901643	130916475,130911771,130910370,130910137,130908083,130906721,130906133,130903384,130901845	Gene ID= ENSG00000120451.10 TPM= 6.76 Transcript Type= NA
chr11	130908409	130916475	130908409	130916475	-	transcript5879.chr11.nnic@SNX19	transcript5879.chr11.nnic	protein_coding	130914266,130911633,130910270,130910018,130908409	130916475,130911771,130910370,130910137,130908445	Gene ID= ENSG00000120451.10 TPM= 9.65 Transcript Type= NA
chr11	134224645	134247792	134224645	134247792	+	ENST00000281187.9@VPS26B	ENST00000281187.9	protein_coding	134224645,134234897,134239991,134243119,134244938,134245444	134225345,134235053,134240155,134243294,134245080,134247792	Gene ID= ENSG00000151502.10 TPM= 78.19 Transcript Type= protein_coding
chr11	134224677	134245729	134224677	134245729	+	ENST00000525095.2@VPS26B	ENST00000525095.2	protein_coding	134224677,134224800,134234897,134239991,134243119,134244938,134245444	134224761,134225345,134235053,134240155,134243294,134245080,134245729	Gene ID= ENSG00000151502.10 TPM= 28.96 Transcript Type= protein_coding
chr11	134248288	134253364	134248288	134253364	-	transcript5906.chr11.nic@THYN1	transcript5906.chr11.nic	protein_coding	134252840,134251130,134250275,134249828,134249167,134248288	134253364,134251308,134250343,134249920,134249262,134248484	Gene ID= ENSG00000151500.14 TPM= 1.93 Transcript Type= NA
chr11	134248279	134253370	134248279	134253370	-	ENST00000392594.7@THYN1	ENST00000392594.7	protein_coding	134253299,134252840,134251130,134250275,134249828,134249167,134248809,134248279	134253370,134252916,134251308,134250343,134249920,134249262,134248959,134248484	Gene ID= ENSG00000151500.14 TPM= 16.41 Transcript Type= protein_coding
chr11	134248279	134253344	134248279	134253344	-	ENST00000341541.7@THYN1	ENST00000341541.7	protein_coding	134252840,134251130,134250275,134249828,134249167,134248809,134248279	134253344,134251308,134250343,134249920,134249262,134248959,134248484	Gene ID= ENSG00000151500.14 TPM= 7.72 Transcript Type= protein_coding
chr11	134253495	134265855	134253495	134265855	+	ENST00000281182.8@ACAD8	ENST00000281182.8	protein_coding	134253495,134256548,134257088,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134264908	134253709,134256648,134257257,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134265855	Gene ID= ENSG00000151498.11 TPM= 78.99 Transcript Type= protein_coding
chr11	134253534	134265855	134253534	134265855	+	transcript5921.chr11.nic@ACAD8	transcript5921.chr11.nic	protein_coding	134253534,134256548,134257088,134258515,134259008,134259608,134261275,134261738,134262520,134264908	134253709,134256648,134257257,134258624,134259084,134261179,134261372,134261890,134262622,134265855	Gene ID= ENSG00000151498.11 TPM= 3.38 Transcript Type= NA
chr11	134253534	134265855	134253534	134265855	+	transcript5925.chr11.nic@ACAD8	transcript5925.chr11.nic	protein_coding	134253534,134256548,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134264908	134253709,134256648,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134265855	Gene ID= ENSG00000151498.11 TPM= 6.59 Transcript Type= NA
chr12	14522	31407	14522	31407	-	transcript2.chr12.nnic@AC215219.1	transcript2.chr12.nnic	unprocessed_pseudogene	31375,18373,18037,17723,17348,16969,16722,15913,15085,14522	31407,18471,18183,17859,17483,17170,16880,16065,15153,14944	Gene ID= ENSG00000226210.3 TPM= 20.27 Transcript Type= NA
chr12	309894	389570	309894	389570	-	transcript9.chr12.nnic@KDM5A	transcript9.chr12.nnic	protein_coding	388927,385897,384031,365934,362963,356432,355158,354076,352205,350621,334241,333487,331819,328835,323600,323082,322417,320995,318058,313056,310885,309894	389570,385974,384153,366104,363097,356537,355249,354234,352324,350779,334422,333649,331938,329029,323781,323206,322567,321109,318461,313194,311064,309964	Gene ID= ENSG00000073614.12 TPM= 9.33 Transcript Type= NA
chr12	309894	389570	309894	389570	-	transcript11.chr12.nic@KDM5A	transcript11.chr12.nic	protein_coding	388927,385897,384031,365934,362963,356432,355158,354076,352205,350621,334241,333487,331819,328835,323600,323082,322417,320995,318106,313056,310885,309894	389570,385974,384153,366104,363097,356537,355249,354234,352324,350779,334422,333649,331938,329029,323781,323206,322567,321109,318461,313194,311064,309964	Gene ID= ENSG00000073614.12 TPM= 33.47 Transcript Type= NA
chr12	309894	389570	309894	389570	-	transcript13.chr12.nnic@KDM5A	transcript13.chr12.nnic	protein_coding	388927,385897,384031,365934,362963,356432,355158,354076,352205,350621,334241,333487,331819,328835,323600,323082,322417,318106,313056,310885,309894	389570,385974,384153,366104,363097,356537,355249,354234,352324,350779,334422,333649,331938,329029,323781,323206,322567,318461,313194,311064,309964	Gene ID= ENSG00000073614.12 TPM= 9.33 Transcript Type= NA
chr12	401576	442645	401576	442645	+	ENST00000239830.8@CCDC77	ENST00000239830.8	protein_coding	401576,405511,409368,411747,418494,428769,430664,431866,433174,438335,440617,440844,441774	401684,405564,409421,411978,418636,428865,430736,431954,433322,438554,440742,440996,442645	Gene ID= ENSG00000120647.9 TPM= 3.86 Transcript Type= protein_coding
chr12	642981	645415	642981	645415	+	ENST00000318291.4@AC021054.1	ENST00000318291.4	antisense_RNA	642981,643959	643717,645415	Gene ID= ENSG00000177406.4 TPM= 12.07 Transcript Type= antisense_RNA
chr12	642913	645876	642913	645876	+	transcript26.chr12.nnic@NA	transcript26.chr12.nnic	NA	642913	645876	Gene ID= novel_gene_chr12_27 TPM= 8.21 Transcript Type= NA
chr12	752545	861135	752545	861135	+	transcript31.chr12.nic@WNK1	transcript31.chr12.nic	protein_coding	752545,813642,827042,830003,857161,859245,861013	754324,813814,827262,830160,857249,859464,861135	Gene ID= ENSG00000060237.16 TPM= 36.68 Transcript Type= NA
chr12	752593	911300	752593	911300	+	ENST00000535572.5@WNK1	ENST00000535572.5	protein_coding	752593,813642,827042,830003,857161,859245,861013,862083,871265,878215,881692,881911,882943,883395,883774,884121,884649,887221,889140,890453,894562,896071,897479,900476,907847,908475	754324,813814,827262,830160,857249,859464,861343,862270,871348,878361,881789,882073,883059,883568,883831,884243,886084,887304,889223,890510,894635,896732,897681,900670,908034,911300	Gene ID= ENSG00000060237.16 TPM= 49.23 Transcript Type= protein_coding
chr12	753056	827501	753056	827501	+	ENST00000447667.2@WNK1	ENST00000447667.2	protein_coding	753056,813642,827042	754324,813814,827501	Gene ID= ENSG00000060237.16 TPM= 6.76 Transcript Type= protein_coding
chr12	912077	949722	912077	949722	-	ENST00000358495.7@RAD52	ENST00000358495.7	protein_coding	949602,932975,931220,930051,929819,927145,925450,916639,916344,914431,913894,912077	949722,933076,931321,930144,929886,927263,925525,916820,916483,914532,914121,913452	Gene ID= ENSG00000002016.17 TPM= 4.83 Transcript Type= protein_coding
chr12	991225	1245368	991225	1245368	+	transcript54.chr12.nic@ERC1	transcript54.chr12.nic	protein_coding	991225,1027748,1083164,1104750,1110192,1112215,1115866,1141620,1180540,1181925,1183281,1189859,1204501,1236769,1244543	991322,1028572,1083580,1104824,1110347,1112298,1116033,1141787,1180677,1182065,1183421,1190052,1204512,1236904,1245368	Gene ID= ENSG00000082805.19 TPM= 3.86 Transcript Type= NA
chr12	991222	1181988	991222	1181988	+	transcript58.chr12.nic@ERC1	transcript58.chr12.nic	protein_coding	991222,1027748,1083164,1104750,1110192,1112215,1115866,1141620,1180540,1181925	991487,1028572,1083580,1104824,1110347,1112298,1116033,1141787,1180677,1181988	Gene ID= ENSG00000082805.19 TPM= 1.93 Transcript Type= NA
chr12	1591349	1594840	1591349	1594840	-	transcript67.chr12.nnic@NA	transcript67.chr12.nnic	NA	1591349	1594840	Gene ID= novel_gene_chr12_68 TPM= 10.62 Transcript Type= NA
chr12	1691155	1788671	1691155	1788671	+	transcript69.chr12.nnic@ADIPOR2	transcript69.chr12.nnic	protein_coding	1691155,1754258,1772842,1777854,1780451,1780889,1783880,1785944,1786621	1691213,1754514,1772961,1778025,1780637,1781076,1784073,1786236,1788671	Gene ID= ENSG00000006831.9 TPM= 1.93 Transcript Type= NA
chr12	1691027	1788678	1691027	1788678	+	ENST00000357103.4@ADIPOR2	ENST00000357103.4	protein_coding	1691027,1754258,1772842,1777854,1780451,1780889,1783880,1785944	1691191,1754514,1772961,1778025,1780637,1781076,1784073,1788678	Gene ID= ENSG00000006831.9 TPM= 10.62 Transcript Type= protein_coding
chr12	1946054	2004511	1946054	2004511	-	ENST00000280665.10@DCP1B	ENST00000280665.10	protein_coding	2004282,1997935,1993264,1967844,1965558,1955432,1952416,1949086,1946054	2004511,1997975,1993391,1967910,1965693,1955560,1953288,1949334,1946286	Gene ID= ENSG00000151065.13 TPM= 17.38 Transcript Type= protein_coding
chr12	1991456	2004535	1991456	2004535	-	ENST00000535873.2@DCP1B	ENST00000535873.2	protein_coding	2004282,1997935,1991456	2004535,1997975,1993391	Gene ID= ENSG00000151065.13 TPM= 1.93 Transcript Type= protein_coding
chr12	2794953	2805423	2794953	2805423	+	ENST00000001008.5@FKBP4	ENST00000001008.5	protein_coding	2794953,2797138,2797729,2798706,2799088,2799850,2800039,2800392,2801117,2803151	2795244,2797282,2797871,2798826,2799244,2799940,2800122,2800577,2801356,2805423	Gene ID= ENSG00000004478.7 TPM= 26.06 Transcript Type= protein_coding
chr12	2812622	2825071	2812622	2825071	+	ENST00000228799.6@ITFG2	ENST00000228799.6	protein_coding	2812622,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090	2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2823943,2825071	Gene ID= ENSG00000111203.11 TPM= 15.44 Transcript Type= protein_coding
chr12	2812650	2824941	2812650	2824941	+	transcript86.chr12.nic@ITFG2	transcript86.chr12.nic	protein_coding	2812650,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090	2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2824013,2824941	Gene ID= ENSG00000111203.11 TPM= 3.86 Transcript Type= NA
chr12	2819099	2824941	2819099	2824941	+	transcript96.chr12.nic@ITFG2	transcript96.chr12.nic	protein_coding	2819099,2820724,2821262,2821543,2821692,2822794,2823770,2824090	2820225,2820872,2821359,2821596,2821792,2822911,2824013,2824941	Gene ID= ENSG00000111203.11 TPM= 2.9 Transcript Type= NA
chr12	2877208	2889440	2877208	2889440	+	ENST00000464682.2@RHNO1	ENST00000464682.2	protein_coding	2877208,2887911	2877282,2889440	Gene ID= ENSG00000171792.10 TPM= 2.9 Transcript Type= processed_transcript
chr12	2959513	3040665	2959513	3040665	+	transcript118.chr12.nic@TEAD4	transcript118.chr12.nic	protein_coding	2959513,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2960353,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 16.81 Transcript Type= NA
chr12	2959742	3040665	2959742	3040665	+	transcript123.chr12.nic@TEAD4	transcript123.chr12.nic	protein_coding	2959742,2994738,3011004,3012170,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2960040,2994992,3011068,3012232,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 37.22 Transcript Type= NA
chr12	2959330	3040665	2959330	3040665	+	ENST00000358409.6@TEAD4	ENST00000358409.6	protein_coding	2959330,2959948,2994738,3011004,3012170,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2959481,2960040,2994992,3011068,3012232,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 32.4 Transcript Type= protein_coding
chr12	2959414	3040673	2959414	3040673	+	ENST00000359864.6@TEAD4	ENST00000359864.6	protein_coding	2959414,2959948,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2959481,2960040,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040673	Gene ID= ENSG00000197905.8 TPM= 58.31 Transcript Type= protein_coding
chr12	3040362	3044784	3040362	3044784	+	transcript133.chr12.nnic@NA	transcript133.chr12.nnic	NA	3040362	3044784	Gene ID= novel_gene_chr12_134 TPM= 4.83 Transcript Type= NA
chr12	4441085	4445816	4441085	4445816	-	transcript139.chr12.nnic@FGF6	transcript139.chr12.nnic	protein_coding	4445225,4444133,4441085	4445816,4444236,4441471	Gene ID= ENSG00000111241.2 TPM= 2.9 Transcript Type= NA
chr12	4487728	4538471	4487728	4538471	-	ENST00000261250.7@C12orf4	ENST00000261250.7	protein_coding	4538409,4536017,4534157,4529869,4525484,4525254,4518774,4518058,4517061,4505306,4500138,4491177,4490522,4487728	4538471,4536219,4534302,4530050,4525583,4525375,4518880,4518255,4517189,4505380,4500340,4491234,4490589,4489899	Gene ID= ENSG00000047621.11 TPM= 6.76 Transcript Type= protein_coding
chr12	4604887	4613888	4604887	4613888	+	transcript152.chr12.nic@DYRK4	transcript152.chr12.nic	protein_coding	4604887,4607327,4610155,4612543,4613512	4605086,4607387,4610284,4612718,4613888	Gene ID= ENSG00000010219.13 TPM= 1.93 Transcript Type= NA
chr12	4604897	4613873	4604897	4613873	+	ENST00000545571.5@DYRK4	ENST00000545571.5	protein_coding	4604897,4610155,4612543,4613515	4605086,4610284,4612718,4613873	Gene ID= ENSG00000010219.13 TPM= 2.9 Transcript Type= retained_intron
chr12	4649107	4694317	4649107	4694317	+	ENST00000266544.9@NDUFA9	ENST00000266544.9	protein_coding	4649107,4654292,4654825,4657748,4659036,4662533,4668457,4669741,4682205,4685259,4686938	4649175,4654462,4654922,4657839,4659177,4662635,4668524,4669817,4682300,4685325,4694317	Gene ID= ENSG00000139180.10 TPM= 3.86 Transcript Type= protein_coding
chr12	5043989	5046788	5043989	5046788	+	ENST00000252321.4@KCNA5	ENST00000252321.4	protein_coding	5043989	5046788	Gene ID= ENSG00000130037.4 TPM= 3.86 Transcript Type= protein_coding
chr12	5948874	6124675	5948874	6124675	-	ENST00000261405.9@VWF	ENST00000261405.9	protein_coding	6124421,6123142,6121174,6110866,6110374,6095460,6075335,6073619,6072331,6071297,6065137,6064246,6062954,6057849,6056857,6052543,6046723,6044291,6036388,6034688,6031444,6029342,6025906,6025580,6023631,6022740,6021900,6018365,6016754,6016516,6016089,6013481,6012087,6011617,5996002,5994415,5993862,5991819,5985563,5985045,5983150,5981786,5976111,5971599,5969211,5968127,5967486,5953496,5952391,5951844,5949786,5948874	6124675,6123196,6121338,6110968,6110582,6095584,6075551,6073741,6072442,6071343,6065273,6064384,6063054,6058044,6057072,6052783,6046817,6044451,6036491,6034826,6031578,6029488,6026046,6025693,6023787,6022898,6022035,6019743,6016870,6016656,6016232,6013645,6012130,6011794,5996222,5994607,5994203,5992018,5985665,5985119,5983254,5981991,5976260,5971709,5969391,5968167,5967602,5953594,5952519,5951883,5949883,5949203	Gene ID= ENSG00000110799.13 TPM= 123.56 Transcript Type= protein_coding
chr12	6200316	6238271	6200316	6238271	+	ENST00000610354.4@CD9	ENST00000610354.4	protein_coding	6200316,6225426,6232632,6233412,6235229,6235475,6236192,6237763	6200565,6225534,6232729,6233486,6235327,6235565,6236275,6238271	Gene ID= ENSG00000010278.12 TPM= 43.83 Transcript Type= protein_coding
chr12	6226308	6238259	6226308	6238259	+	transcript176.chr12.nnic@CD9	transcript176.chr12.nnic	protein_coding	6226308,6232632,6233412,6235229,6235476,6236192,6237763	6226360,6232729,6233486,6235327,6235565,6236275,6238259	Gene ID= ENSG00000010278.12 TPM= 4.97 Transcript Type= NA
chr12	6226330	6238259	6226330	6238259	+	transcript177.chr12.nnic@CD9	transcript177.chr12.nnic	protein_coding	6226330,6232632,6233412,6235229,6235476,6236192,6237763	6226440,6232729,6233486,6235327,6235565,6236275,6238259	Gene ID= ENSG00000010278.12 TPM= 4.01 Transcript Type= NA
chr12	6233298	6238259	6233298	6238259	+	transcript178.chr12.nic@CD9	transcript178.chr12.nic	protein_coding	6233298,6235229,6235476,6236192,6237763	6233486,6235327,6235565,6236275,6238259	Gene ID= ENSG00000010278.12 TPM= 7.87 Transcript Type= NA
chr12	6200797	6238259	6200797	6238259	+	ENST00000382515.6@CD9	ENST00000382515.6	protein_coding	6200797,6225426,6232632,6233412,6235229,6235476,6236192,6237763	6200973,6225534,6232729,6233486,6235327,6235565,6236275,6238259	Gene ID= ENSG00000010278.12 TPM= 4.01 Transcript Type= protein_coding
chr12	6328757	6342114	6328757	6342114	-	ENST00000162749.6@TNFRSF1A	ENST00000162749.6	protein_coding	6341776,6334091,6333737,6333367,6333069,6330853,6330598,6330267,6329778,6328757	6342114,6334244,6333865,6333516,6333147,6330926,6330711,6330295,6330066,6329622	Gene ID= ENSG00000067182.7 TPM= 73.6 Transcript Type= protein_coding
chr12	6328757	6342114	6328757	6342114	-	ENST00000534885.5@TNFRSF1A	ENST00000534885.5	protein_coding	6341776,6333737,6333367,6333069,6330853,6330598,6330267,6329778,6328757	6342114,6333865,6333516,6333147,6330926,6330711,6330295,6330066,6329622	Gene ID= ENSG00000067182.7 TPM= 11.83 Transcript Type= nonsense_mediated_decay
chr12	6328757	6342040	6328757	6342040	-	transcript184.chr12.nic@TNFRSF1A	transcript184.chr12.nic	protein_coding	6341776,6334091,6333737,6333367,6333069,6330598,6330267,6329778,6328757	6342040,6334244,6333865,6333516,6333147,6330711,6330295,6330066,6329622	Gene ID= ENSG00000067182.7 TPM= 13.27 Transcript Type= NA
chr12	6384033	6391563	6384033	6391563	+	ENST00000228918.8@LTBR	ENST00000228918.8	protein_coding	6384033,6384588,6385022,6385227,6386066,6386347,6388398,6388800,6390112,6390660	6384454,6384684,6385147,6385379,6386162,6386444,6388505,6388825,6390340,6391563	Gene ID= ENSG00000111321.10 TPM= 51.16 Transcript Type= protein_coding
chr12	6452084	6462318	6452084	6462318	+	ENST00000266556.7@TAPBPL	ENST00000266556.7	protein_coding	6452084,6453067,6453447,6457406,6458645,6460855,6462034	6452312,6453297,6453716,6457744,6458947,6460938,6462318	Gene ID= ENSG00000139192.11 TPM= 10.62 Transcript Type= protein_coding
chr12	6462237	6470987	6462237	6470987	-	ENST00000361716.7@VAMP1	ENST00000361716.7	protein_coding	6470530,6466225,6465842,6462237	6470987,6466351,6466000,6464941	Gene ID= ENSG00000139190.16 TPM= 1.93 Transcript Type= protein_coding
chr12	6491886	6493598	6491886	6493598	-	ENST00000229238.4@MRPL51	ENST00000229238.4	protein_coding	6493058,6492862,6491886	6493598,6492972,6492467	Gene ID= ENSG00000111639.7 TPM= 2.9 Transcript Type= protein_coding
chr12	6492147	6493840	6492147	6493840	-	ENST00000543164.5@MRPL51	ENST00000543164.5	protein_coding	6493459,6492862,6492147	6493840,6492972,6492467	Gene ID= ENSG00000111639.7 TPM= 4.83 Transcript Type= protein_coding
chr12	6492103	6493841	6492103	6493841	-	ENST00000537701.5@MRPL51	ENST00000537701.5	protein_coding	6493717,6492862,6492103	6493841,6492972,6492467	Gene ID= ENSG00000111639.7 TPM= 4.83 Transcript Type= protein_coding
chr12	6493379	6531955	6493379	6531955	+	ENST00000315579.9@NCAPD2	ENST00000315579.9	protein_coding	6493379,6495076,6509717,6510075,6510629,6511110,6514265,6514464,6514773,6516828,6517365,6517596,6517779,6520986,6521798,6522828,6523262,6525583,6526068,6526287,6526448,6526891,6527777,6527968,6528173,6528679,6528945,6529513,6529775,6530691,6530921,6531327	6494154,6495225,6509792,6510133,6510810,6511252,6514392,6514587,6514920,6517025,6517499,6517683,6517959,6521110,6522037,6523002,6523346,6525716,6526200,6526371,6526615,6527063,6527888,6528091,6528328,6528856,6529039,6529593,6529958,6530817,6531076,6531955	Gene ID= ENSG00000010292.12 TPM= 8.69 Transcript Type= protein_coding
chr12	6533927	6538371	6533927	6538371	+	ENST00000229239.9@GAPDH	ENST00000229239.9	protein_coding	6533927,6534810,6536494,6536684,6536920,6537101,6537309,6537584,6538101	6534569,6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538371	Gene ID= ENSG00000111640.14 TPM= 22216.06 Transcript Type= protein_coding
chr12	6534534	6538359	6534534	6538359	+	ENST00000396861.5@GAPDH	ENST00000396861.5	protein_coding	6534534,6534810,6536494,6536684,6536920,6537101,6537309,6537584,6538101	6534661,6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538359	Gene ID= ENSG00000111640.14 TPM= 105.56 Transcript Type= protein_coding
chr12	6534754	6538339	6534754	6538339	+	ENST00000396859.5@GAPDH	ENST00000396859.5	protein_coding	6534754,6536494,6536684,6536920,6537101,6537309,6537584,6538101	6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538339	Gene ID= ENSG00000111640.14 TPM= 17.59 Transcript Type= protein_coding
chr12	6534532	6538340	6534532	6538340	+	ENST00000396856.5@GAPDH	ENST00000396856.5	protein_coding	6534532,6534810,6536494,6536684,6536920,6537101,6537309,6537584,6538101	6534569,6534861,6536593,6536817,6537010,6537216,6537390,6537996,6538340	Gene ID= ENSG00000111640.14 TPM= 3.4 Transcript Type= protein_coding
chr12	6539540	6556095	6539540	6556095	-	transcript222.chr12.nnic@IFFO1	transcript222.chr12.nnic	protein_coding	6555995,6555257,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539540	6556095,6555885,6551001,6550790,6549896,6548825,6548545,6548157,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 2.48 Transcript Type= NA
chr12	6539540	6551110	6539540	6551110	-	transcript272.chr12.nic@IFFO1	transcript272.chr12.nic	protein_coding	6550941,6550695,6549756,6549476,6548668,6548425,6548065,6541512,6539540	6551110,6550790,6549896,6549484,6548825,6548545,6548160,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 3.93 Transcript Type= NA
chr12	6539540	6556102	6539540	6556102	-	transcript273.chr12.nic@IFFO1	transcript273.chr12.nic	protein_coding	6555257,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539540	6556102,6551001,6550790,6549896,6548825,6548545,6548160,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 9.4 Transcript Type= NA
chr12	6539528	6556071	6539528	6556071	-	ENST00000396840.6@IFFO1	ENST00000396840.6	protein_coding	6555257,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539528	6556071,6551001,6550790,6549896,6548825,6548545,6548157,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 20.82 Transcript Type= protein_coding
chr12	6578846	6607386	6578846	6607386	-	transcript365.chr12.nic@CHD4	transcript365.chr12.nic	protein_coding	6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846	6607386,6606451,6602497,6602154,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917	Gene ID= ENSG00000111642.14 TPM= 10.62 Transcript Type= NA
chr12	6570083	6607424	6570083	6607424	-	ENST00000544040.5@CHD4	ENST00000544040.5	protein_coding	6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846,6578409,6578029,6577785,6573074,6570869,6570083	6607424,6606451,6602497,6602154,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917,6578546,6578137,6577917,6573269,6571032,6570693	Gene ID= ENSG00000111642.14 TPM= 27.99 Transcript Type= protein_coding
chr12	6650280	6663148	6650280	6663148	-	ENST00000341550.8@ING4	ENST00000341550.8	protein_coding	6663065,6656727,6653230,6652936,6652662,6652271,6651324,6650280	6663148,6656798,6653396,6653050,6652767,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 9.97 Transcript Type= protein_coding
chr12	6650591	6663140	6650591	6663140	-	ENST00000396807.8@ING4	ENST00000396807.8	protein_coding	6663065,6656727,6653230,6652936,6652662,6652271,6651324,6650591	6663140,6656798,6653396,6653050,6652770,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 9.01 Transcript Type= protein_coding
chr12	6650626	6663142	6650626	6663142	-	ENST00000446105.6@ING4	ENST00000446105.6	protein_coding	6663065,6656727,6653230,6652945,6652662,6652271,6651324,6650626	6663142,6656798,6653396,6653050,6652767,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 5.15 Transcript Type= protein_coding
chr12	6666730	6689491	6666730	6689491	-	transcript382.chr12.nic@ZNF384	transcript382.chr12.nic	protein_coding	6689368,6688167,6679455,6678946,6678663,6678127,6677167,6673216,6670760,6669031,6666730	6689491,6688226,6679525,6679183,6678710,6678460,6677259,6673440,6670838,6669189,6668115	Gene ID= ENSG00000126746.17 TPM= 4.83 Transcript Type= NA
chr12	6723741	6731856	6723741	6731856	+	ENST00000543155.5@COPS7A	ENST00000543155.5	protein_coding	6723741,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724179,6724818,6728001,6728311,6729449,6730507,6730820,6731856	Gene ID= ENSG00000111652.9 TPM= 122.43 Transcript Type= protein_coding
chr12	6724014	6731873	6724014	6731873	+	ENST00000626119.2@COPS7A	ENST00000626119.2	protein_coding	6724014,6724614,6728223,6729247,6730402,6730669,6731000	6724152,6724818,6728311,6729449,6730507,6730820,6731873	Gene ID= ENSG00000111652.9 TPM= 11.42 Transcript Type= protein_coding
chr12	6724071	6731807	6724071	6731807	+	ENST00000229251.7@COPS7A	ENST00000229251.7	protein_coding	6724071,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724152,6724818,6728001,6728311,6729449,6730507,6730820,6731807	Gene ID= ENSG00000111652.9 TPM= 3.86 Transcript Type= protein_coding
chr12	6724079	6731828	6724079	6731828	+	ENST00000539735.5@COPS7A	ENST00000539735.5	protein_coding	6724079,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724250,6724818,6728001,6728311,6729449,6730507,6730820,6731828	Gene ID= ENSG00000111652.9 TPM= 24.13 Transcript Type= protein_coding
chr12	6724287	6731875	6724287	6731875	+	ENST00000534947.5@COPS7A	ENST00000534947.5	protein_coding	6724287,6727926,6728223,6729247,6730402,6730669,6731000	6724818,6728001,6728311,6729449,6730507,6730820,6731875	Gene ID= ENSG00000111652.9 TPM= 9.82 Transcript Type= protein_coding
chr12	6724298	6731842	6724298	6731842	+	ENST00000534877.5@COPS7A	ENST00000534877.5	protein_coding	6724298,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724330,6724818,6728001,6728311,6729449,6730507,6730820,6731842	Gene ID= ENSG00000111652.9 TPM= 1.28 Transcript Type= protein_coding
chr12	6747996	6753555	6747996	6753555	-	ENST00000203630.9@MLF2	ENST00000203630.9	protein_coding	6752939,6752285,6751925,6751641,6750713,6750177,6749848,6748770,6747996	6753555,6752362,6752054,6751676,6750766,6750305,6750007,6748982,6748547	Gene ID= ENSG00000089693.10 TPM= 165.55 Transcript Type= protein_coding
chr12	6748004	6752916	6748004	6752916	-	ENST00000435120.5@MLF2	ENST00000435120.5	protein_coding	6752882,6752285,6751925,6751641,6750713,6750177,6749848,6748770,6748004	6752916,6752362,6752054,6751676,6750766,6750305,6750007,6748982,6748547	Gene ID= ENSG00000089693.10 TPM= 6.76 Transcript Type= protein_coding
chr12	6766361	6769999	6766361	6769999	+	transcript423.chr12.nic@PTMS	transcript423.chr12.nic	protein_coding	6766361,6769603,6769921	6766750,6769674,6769999	Gene ID= ENSG00000159335.15 TPM= 3.86 Transcript Type= NA
chr12	6789472	6820808	6789472	6820808	+	ENST00000011653.8@CD4	ENST00000011653.8	protein_coding	6789472,6800072,6800307,6814142,6814759,6816056,6817130,6818421,6818847,6819299	6789662,6800187,6800471,6814300,6814992,6816403,6817330,6818542,6818914,6820808	Gene ID= ENSG00000010610.9 TPM= 3.86 Transcript Type= protein_coding
chr12	6828410	6839851	6828410	6839851	+	ENST00000290510.9@P3H3	ENST00000290510.9	protein_coding	6828410,6829859,6830353,6830639,6831216,6831825,6833592,6833742,6833925,6836985,6837423,6837732,6837958,6839000,6839297	6828938,6830011,6830554,6830770,6831352,6831914,6833644,6833809,6834049,6837086,6837573,6837849,6838033,6839140,6839851	Gene ID= ENSG00000110811.19 TPM= 1.93 Transcript Type= protein_coding
chr12	6852128	6866629	6852128	6866629	+	ENST00000229268.12@USP5	ENST00000229268.12	protein_coding	6852128,6855401,6855755,6856017,6856305,6856707,6857629,6858424,6859470,6860151,6860366,6860953,6861443,6862470,6863186,6863830,6864050,6864722,6865164,6865984	6852290,6855526,6855821,6856150,6856450,6856891,6857723,6858617,6859541,6860238,6860491,6861106,6861617,6862558,6863377,6863973,6864195,6864875,6865248,6866629	Gene ID= ENSG00000111667.13 TPM= 164.59 Transcript Type= protein_coding
chr12	6852148	6866620	6852148	6866620	+	ENST00000389231.9@USP5	ENST00000389231.9	protein_coding	6852148,6855401,6855755,6856017,6856305,6856707,6857629,6858424,6859470,6860151,6860366,6860953,6861443,6862470,6863186,6863830,6864050,6864722,6865164,6865984	6852290,6855526,6855821,6856150,6856450,6856891,6857723,6858617,6859541,6860238,6860491,6861106,6861617,6862558,6863308,6863973,6864195,6864875,6865248,6866620	Gene ID= ENSG00000111667.13 TPM= 22.2 Transcript Type= protein_coding
chr12	6862084	6864511	6862084	6864511	-	transcript448.chr12.nnic@NA	transcript448.chr12.nnic	NA	6862084	6864511	Gene ID= novel_gene_chr12_449 TPM= 1.93 Transcript Type= NA
chr12	6867531	6870828	6867531	6870828	+	ENST00000396705.9@TPI1	ENST00000396705.9	protein_coding	6867531,6868864,6869099,6869258,6869688,6870049,6870265	6867681,6868987,6869183,6869390,6869773,6870136,6870828	Gene ID= ENSG00000111669.14 TPM= 1153.06 Transcript Type= protein_coding
chr12	6870935	6873336	6870935	6873336	-	ENST00000524270.5@SPSB2	ENST00000524270.5	protein_coding	6873246,6872238,6870935	6873336,6872997,6871319	Gene ID= ENSG00000111671.9 TPM= 4.83 Transcript Type= protein_coding
chr12	6904733	6914229	6904733	6914229	+	ENST00000007969.12@LRRC23	ENST00000007969.12	protein_coding	6904733,6905585,6905845,6906409,6907315,6909890,6912730,6913891	6904903,6905759,6905954,6906662,6907445,6910026,6913027,6914229	Gene ID= ENSG00000010626.14 TPM= 2.9 Transcript Type= protein_coding
chr12	6904791	6914194	6904791	6914194	+	ENST00000451681.5@LRRC23	ENST00000451681.5	protein_coding	6904791,6905585,6906409,6907315,6909890,6912730,6913891	6904903,6905759,6906662,6907445,6910026,6913027,6914194	Gene ID= ENSG00000010626.14 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	6924463	6942321	6924463	6942321	+	ENST00000356654.8@ATN1	ENST00000356654.8	protein_coding	6924463,6933840,6934176,6934465,6935547,6937845,6938481,6940880,6941374,6941747	6924537,6934028,6934313,6934578,6937561,6938067,6939177,6941023,6941554,6942321	Gene ID= ENSG00000111676.14 TPM= 51.16 Transcript Type= protein_coding
chr12	6944023	6946002	6944023	6946002	+	ENST00000229281.5@C12orf57	ENST00000229281.5	protein_coding	6944023,6944476,6945771	6944173,6944652,6946002	Gene ID= ENSG00000111678.10 TPM= 107.15 Transcript Type= protein_coding
chr12	6951269	6961313	6951269	6961313	+	ENST00000318974.13@PTPN6	ENST00000318974.13	protein_coding	6951269,6951609,6951983,6954805,6955151,6955372,6955660,6956142,6956419,6957654,6957919,6959927,6960088,6960344,6960806,6961126	6951520,6951731,6952177,6954994,6955267,6955485,6955756,6956221,6956568,6957785,6958073,6959994,6960239,6960435,6960945,6961313	Gene ID= ENSG00000111679.16 TPM= 7.72 Transcript Type= protein_coding
chr12	6965352	6970825	6965352	6970825	-	ENST00000535923.5@PHB2	ENST00000535923.5	protein_coding	6970417,6970196,6969498,6968411,6967892,6967676,6967171,6966424,6965911,6965352	6970825,6970280,6969577,6968595,6968021,6967779,6967248,6966500,6965916,6965712	Gene ID= ENSG00000215021.8 TPM= 26.55 Transcript Type= protein_coding
chr12	6965354	6970623	6965354	6970623	-	ENST00000399433.6@PHB2	ENST00000399433.6	protein_coding	6970417,6970196,6969498,6968411,6967892,6967676,6967171,6966423,6965354	6970623,6970280,6969577,6968595,6968021,6967779,6967248,6966500,6965714	Gene ID= ENSG00000215021.8 TPM= 19.79 Transcript Type= protein_coding
chr12	6970893	6979941	6970893	6979941	+	ENST00000599672.5@EMG1	ENST00000599672.5	protein_coding	6970893,6974339,6974552,6975090,6975229,6975696	6971091,6974440,6974693,6975148,6975378,6979941	Gene ID= ENSG00000126749.14 TPM= 37.65 Transcript Type= protein_coding
chr12	6976186	7018510	6976186	7018510	-	ENST00000261407.8@LPCAT3	ENST00000261407.8	protein_coding	7018274,6983432,6982676,6981811,6981595,6981004,6979471,6978603,6978341,6977598,6977367,6977134,6976186	7018510,6983539,6982782,6981904,6981632,6981182,6979579,6978689,6978507,6977745,6977525,6977262,6976891	Gene ID= ENSG00000111684.10 TPM= 23.17 Transcript Type= protein_coding
chr12	7060515	7071032	7060515	7071032	+	ENST00000328916.7@C1S	ENST00000328916.7	protein_coding	7060515,7061752,7062475,7062890,7064267,7065100,7065817,7066518,7067039,7067643,7068456,7069855	7060877,7061917,7062682,7063067,7064392,7065299,7065970,7066633,7067117,7067771,7068530,7071032	Gene ID= ENSG00000182326.14 TPM= 102.32 Transcript Type= protein_coding
chr12	7080209	7092607	7080209	7092607	-	ENST00000542285.5@C1R	ENST00000542285.5	protein_coding	7092387,7091452,7090056,7089587,7089293,7088839,7088610,7086379,7085861,7082032,7080209	7092607,7091680,7090248,7089733,7089489,7088986,7088731,7086457,7086016,7082106,7081301	Gene ID= ENSG00000159403.15 TPM= 35.72 Transcript Type= protein_coding
chr12	7189584	7211483	7189584	7211483	+	ENST00000266563.9@PEX5	ENST00000266563.9	protein_coding	7189584,7190362,7190888,7191226,7191569,7199011,7201751,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022	7189750,7190524,7190923,7191358,7191700,7199113,7201841,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211483	Gene ID= ENSG00000139197.10 TPM= 10.94 Transcript Type= protein_coding
chr12	7189742	7211480	7189742	7211480	+	transcript527.chr12.nic@PEX5	transcript527.chr12.nic	protein_coding	7189742,7190362,7190888,7191226,7191569,7199011,7201751,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022	7189980,7190524,7190923,7191358,7191700,7199113,7201841,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211480	Gene ID= ENSG00000139197.10 TPM= 5.63 Transcript Type= NA
chr12	7189753	7211480	7189753	7211480	+	transcript528.chr12.nic@PEX5	transcript528.chr12.nic	protein_coding	7189753,7190362,7190888,7191226,7191569,7199011,7201751,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022	7190216,7190524,7190923,7191358,7191700,7199113,7201841,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211480	Gene ID= ENSG00000139197.10 TPM= 6.59 Transcript Type= NA
chr12	7471176	7503789	7471176	7503789	-	transcript541.chr12.nic@CD163	transcript541.chr12.nic	protein_coding	7503645,7502478,7501139,7498868,7496813,7495081,7487773,7487359,7486894,7486499,7485096,7483367,7482966,7482643,7479860,7471176	7503789,7502564,7501462,7499188,7497133,7495401,7488087,7487673,7486986,7486813,7485416,7483675,7483004,7482762,7479996,7471397	Gene ID= ENSG00000177575.12 TPM= 1.93 Transcript Type= NA
chr12	7471180	7503776	7471180	7503776	-	ENST00000432237.2@CD163	ENST00000432237.2	protein_coding	7503645,7502478,7501139,7498868,7496813,7495081,7487773,7487359,7486894,7486499,7485096,7483367,7482966,7482643,7481161,7479860,7471180	7503776,7502564,7501462,7499188,7497133,7495401,7488087,7487673,7486986,7486813,7485416,7483675,7483004,7482762,7481256,7479913,7471397	Gene ID= ENSG00000177575.12 TPM= 16.41 Transcript Type= protein_coding
chr12	8032703	8055503	8032703	8055503	+	ENST00000162391.7@FOXJ2	ENST00000162391.7	protein_coding	8032703,8039819,8042658,8043701,8043951,8044760,8047882,8048697,8049362,8050522,8052762	8033833,8040165,8042732,8043769,8044091,8044958,8048289,8048798,8049571,8050620,8055503	Gene ID= ENSG00000065970.8 TPM= 30.89 Transcript Type= protein_coding
chr12	8058302	8066471	8058302	8066471	-	ENST00000307637.4@C3AR1	ENST00000307637.4	protein_coding	8066278,8058302	8066471,8060195	Gene ID= ENSG00000171860.4 TPM= 1.93 Transcript Type= protein_coding
chr12	8082211	8097777	8082211	8097777	+	ENST00000339754.10@NECAP1	ENST00000339754.10	protein_coding	8082211,8089936,8090195,8091769,8092676,8092872,8095601,8096042	8082383,8090036,8090299,8091850,8092784,8093055,8095703,8097777	Gene ID= ENSG00000089818.17 TPM= 12.07 Transcript Type= protein_coding
chr12	8082268	8097769	8082268	8097769	+	ENST00000450991.6@NECAP1	ENST00000450991.6	protein_coding	8082268,8089936,8090195,8092676,8092872,8095601,8096042	8082383,8090036,8090299,8092784,8093055,8095703,8097769	Gene ID= ENSG00000089818.17 TPM= 4.34 Transcript Type= nonsense_mediated_decay
chr12	8645956	8663178	8645956	8663178	-	transcript554.chr12.nnic@MFAP5	transcript554.chr12.nnic	protein_coding	8663028,8662627,8662047,8660863,8655786,8655415,8654437,8651662,8650502,8649501,8645956	8663178,8662764,8662106,8660898,8655830,8655447,8654481,8651691,8650589,8649574,8648203	Gene ID= ENSG00000197614.10 TPM= 1.93 Transcript Type= NA
chr12	8645956	8662812	8645956	8662812	-	ENST00000359478.6@MFAP5	ENST00000359478.6	protein_coding	8662627,8662047,8660863,8655786,8655415,8654437,8651662,8650502,8649501,8645956	8662812,8662106,8660898,8655830,8655447,8654481,8651691,8650589,8649574,8648203	Gene ID= ENSG00000197614.10 TPM= 5.79 Transcript Type= protein_coding
chr12	8697947	8783085	8697947	8783085	+	transcript559.chr12.nic@RIMKLB	transcript559.chr12.nic	protein_coding	8697947,8713811,8749862,8751957,8753890,8773321,8777590,8780575,8782912	8698297,8714041,8750092,8752043,8754093,8773466,8777802,8780739,8783085	Gene ID= ENSG00000166532.15 TPM= 1.93 Transcript Type= NA
chr12	8940363	8949719	8940363	8949719	-	transcript568.chr12.nic@M6PR	transcript568.chr12.nic	protein_coding	8949488,8946229,8945418,8943801,8943405,8942416,8940363	8949719,8946405,8945584,8943910,8943535,8942542,8940869	Gene ID= ENSG00000003056.7 TPM= 20.75 Transcript Type= NA
chr12	8940365	8949955	8940365	8949955	-	ENST00000000412.7@M6PR	ENST00000000412.7	protein_coding	8949488,8946229,8945418,8943801,8943405,8942416,8940365	8949955,8946405,8945584,8943910,8943535,8942542,8941940	Gene ID= ENSG00000003056.7 TPM= 67.57 Transcript Type= protein_coding
chr12	8940365	8949653	8940365	8949653	-	transcript576.chr12.nic@M6PR	transcript576.chr12.nic	protein_coding	8949488,8946229,8945418,8943801,8943405,8940365	8949653,8946405,8945584,8943910,8943535,8942542	Gene ID= ENSG00000003056.7 TPM= 6.76 Transcript Type= NA
chr12	9067712	9116157	9067712	9116157	-	ENST00000318602.11@A2M	ENST00000318602.11	protein_coding	9115764,9113360,9112377,9112159,9110314,9109867,9109321,9107524,9106491,9106236,9104239,9101447,9101144,9099381,9098607,9095539,9094973,9093465,9091201,9090356,9089902,9089200,9080094,9079639,9079244,9077701,9077346,9076756,9074560,9072653,9072359,9070488,9069745,9068740,9068183,9067712	9116157,9113543,9112536,9112211,9110334,9110035,9109405,9107644,9106605,9106345,9104400,9101674,9101207,9099523,9098756,9095700,9095084,9093579,9091429,9090482,9090023,9089251,9080177,9079815,9079331,9077857,9077420,9076936,9074783,9072871,9072486,9070578,9069813,9068842,9068224,9067839	Gene ID= ENSG00000175899.14 TPM= 156.38 Transcript Type= protein_coding
chr12	9240003	9243052	9240003	9243052	+	ENST00000427111.4@LINC00987	ENST00000427111.4	lincRNA	9240003,9241118	9240539,9243052	Gene ID= ENSG00000237248.4 TPM= 3.86 Transcript Type= lincRNA
chr12	9648180	9657212	9648180	9657212	+	transcript592.chr12.nic@AC092821.3	transcript592.chr12.nic	processed_transcript	9648180,9653683,9655873,9656568,9656921	9648933,9653808,9655979,9656649,9657212	Gene ID= ENSG00000284634.1 TPM= 2.9 Transcript Type= NA
chr12	9648047	9658412	9648047	9658412	+	ENST00000575094.5@AC010186.2	ENST00000575094.5	transcribed_unprocessed_pseudogene	9648047,9653683,9655873,9656921	9648933,9653808,9655979,9658412	Gene ID= ENSG00000256594.8 TPM= 1.93 Transcript Type= processed_transcript
chr12	10212805	10223130	10212805	10223130	+	ENST00000266458.9@GABARAPL1	ENST00000266458.9	protein_coding	10212805,10218063,10220440,10221787	10213219,10218141,10220558,10223130	Gene ID= ENSG00000139112.10 TPM= 204 Transcript Type= protein_coding
chr12	10212897	10223123	10212897	10223123	+	ENST00000540424.5@GABARAPL1	ENST00000540424.5	protein_coding	10212897,10213836,10214669,10218063,10220440,10221787	10213219,10214187,10214779,10218141,10220558,10223123	Gene ID= ENSG00000139112.10 TPM= 13.83 Transcript Type= nonsense_mediated_decay
chr12	10699089	10723307	10699089	10723307	-	ENST00000279550.11@YBX3	ENST00000279550.11	protein_coding	10722850,10719080,10718088,10715694,10713211,10704051,10701960,10701254,10699089	10723307,10719143,10718121,10715783,10713333,10704148,10702134,10701353,10699654	Gene ID= ENSG00000060138.12 TPM= 9570.12 Transcript Type= protein_coding
chr12	10699213	10723312	10699213	10723312	-	ENST00000228251.8@YBX3	ENST00000228251.8	protein_coding	10722850,10719080,10718088,10715694,10713211,10709908,10704051,10701960,10701254,10699213	10723312,10719143,10718121,10715783,10713333,10710114,10704148,10702134,10701353,10699654	Gene ID= ENSG00000060138.12 TPM= 924.99 Transcript Type= protein_coding
chr12	10995961	11171638	10995961	11171638	-	transcript909.chr12.nnic@AC018630.6	transcript909.chr12.nnic	protein_coding	11171422,11047020,10995961	11171638,11047188,10996325	Gene ID= ENSG00000275778.1 TPM= 2.9 Transcript Type= NA
chr12	10970745	10972281	10970745	10972281	-	transcript928.chr12.nnic@NA	transcript928.chr12.nnic	NA	10970745	10972281	Gene ID= novel_gene_chr12_929 TPM= 1.93 Transcript Type= NA
chr12	11171222	11176016	11171222	11176016	+	ENST00000622602.1@SMIM10L1	ENST00000622602.1	protein_coding	11171222	11176016	Gene ID= ENSG00000256537.4 TPM= 3.86 Transcript Type= protein_coding
chr12	12475897	12562383	12475897	12562383	-	ENST00000228862.3@DUSP16	ENST00000228862.3	protein_coding	12562117,12520871,12519862,12487028,12480223,12475897	12562383,12521463,12520000,12487187,12480346,12478015	Gene ID= ENSG00000111266.8 TPM= 4.83 Transcript Type= protein_coding
chr12	12611892	12645108	12611892	12645108	+	ENST00000228865.2@CREBL2	ENST00000228865.2	protein_coding	12611892,12635777,12637570,12641994	12612187,12635974,12637714,12645108	Gene ID= ENSG00000111269.2 TPM= 3.86 Transcript Type= protein_coding
chr12	12717124	12722371	12717124	12722371	+	ENST00000228872.8@CDKN1B	ENST00000228872.8	protein_coding	12717124,12718825,12721036	12718314,12718954,12722371	Gene ID= ENSG00000111276.10 TPM= 5.79 Transcript Type= protein_coding
chr12	12785607	12791466	12785607	12791466	+	ENST00000356591.4@APOLD1	ENST00000356591.4	protein_coding	12785607,12786909	12785694,12791466	Gene ID= ENSG00000178878.12 TPM= 32.82 Transcript Type= protein_coding
chr12	12725929	12829975	12725929	12829975	+	ENST00000534843.1@APOLD1	ENST00000534843.1	protein_coding	12725929,12726297,12812261,12813207,12814131,12821208,12821655,12821965,12822661,12823203,12823870,12824540,12826000,12827246,12829423	12726096,12726373,12812440,12813454,12814224,12821396,12821726,12822083,12822732,12823319,12824016,12824677,12826070,12827375,12829975	Gene ID= ENSG00000178878.12 TPM= 56.47 Transcript Type= nonsense_mediated_decay
chr12	12813346	12829981	12813346	12829981	+	ENST00000358007.7@DDX47	ENST00000358007.7	protein_coding	12813346,12814131,12821208,12821655,12821965,12822661,12823203,12823870,12824540,12826000,12827246,12829423	12813454,12814224,12821396,12821726,12822083,12822732,12823319,12824016,12824677,12826070,12827375,12829981	Gene ID= ENSG00000213782.7 TPM= 36.2 Transcript Type= protein_coding
chr12	12813354	12829979	12813354	12829979	+	ENST00000545038.5@DDX47	ENST00000545038.5	protein_coding	12813354,12814131,12821208,12821655,12821965,12822661,12823203,12824540,12826000,12827246,12829423	12813454,12814224,12821396,12821726,12822083,12822732,12824016,12824677,12826070,12827375,12829979	Gene ID= ENSG00000213782.7 TPM= 1.93 Transcript Type= retained_intron
chr12	12974864	13000273	12974864	13000273	-	ENST00000014930.8@HEBP1	ENST00000014930.8	protein_coding	13000037,12989277,12987152,12974864	13000273,12989415,12987332,12975479	Gene ID= ENSG00000013583.8 TPM= 53.09 Transcript Type= protein_coding
chr12	13196716	13219939	13196716	13219939	+	ENST00000256951.9@EMP1	ENST00000256951.9	protein_coding	13196716,13211469,13213479,13213681,13214534	13196872,13211588,13213575,13213821,13219939	Gene ID= ENSG00000134531.9 TPM= 21.24 Transcript Type= protein_coding
chr12	14365632	14502935	14365632	14502935	+	ENST00000261168.8@ATF7IP	ENST00000261168.8	protein_coding	14365632,14423909,14434337,14436106,14438130,14446988,14456561,14457207,14460495,14466526,14475890,14478317,14481003,14496231,14497654	14365827,14425473,14434423,14436251,14438267,14447053,14456634,14457295,14461133,14466590,14475968,14478472,14481185,14496343,14502935	Gene ID= ENSG00000171681.12 TPM= 2.9 Transcript Type= protein_coding
chr12	14503661	14568349	14503661	14568349	-	ENST00000240617.9@PLBD1	ENST00000240617.9	protein_coding	14567582,14553193,14542208,14540764,14536570,14535659,14511511,14511260,14506933,14506162,14503661	14568349,14553412,14542291,14540902,14536710,14535803,14511711,14511400,14507118,14506268,14503954	Gene ID= ENSG00000121316.10 TPM= 13.51 Transcript Type= protein_coding
chr12	14774383	14775026	14774383	14775026	+	ENST00000544848.2@H2AFJ	ENST00000544848.2	protein_coding	14774383	14775026	Gene ID= ENSG00000246705.4 TPM= 34.75 Transcript Type= protein_coding
chr12	14784579	14803540	14784579	14803540	-	ENST00000261167.6@WBP11	ENST00000261167.6	protein_coding	14803352,14801320,14800752,14799635,14796807,14794971,14794537,14793731,14791169,14790456,14788951,14784579	14803540,14801428,14800783,14799728,14797003,14795104,14794736,14793922,14791270,14790749,14789133,14787498	Gene ID= ENSG00000084463.7 TPM= 21.24 Transcript Type= protein_coding
chr12	14881181	14885926	14881181	14885926	-	ENST00000539261.5@MGP	ENST00000539261.5	protein_coding	14885731,14884213,14882972,14881181	14885926,14884245,14883047,14882280	Gene ID= ENSG00000111341.9 TPM= 16.41 Transcript Type= protein_coding
chr12	14942017	14961669	14942017	14961669	-	ENST00000228945.8@ARHGDIB	ENST00000228945.8	protein_coding	14961537,14950532,14949802,14947873,14944776,14942017	14961669,14950724,14949885,14947949,14944839,14942721	Gene ID= ENSG00000111348.8 TPM= 12.55 Transcript Type= protein_coding
chr12	15107783	15221473	15107783	15221473	-	transcript996.chr12.nnic@RERG	transcript996.chr12.nnic	protein_coding	15221195,15217429,15121063,15119115,15111344,15107783	15221473,15217603,15121119,15119278,15111417,15109517	Gene ID= ENSG00000134533.6 TPM= 1.93 Transcript Type= NA
chr12	15107783	15221417	15107783	15221417	-	ENST00000256953.6@RERG	ENST00000256953.6	protein_coding	15221195,15217429,15121063,15111344,15107783	15221417,15217603,15121119,15111417,15109517	Gene ID= ENSG00000134533.6 TPM= 2.9 Transcript Type= protein_coding
chr12	15620158	15789370	15620158	15789370	-	ENST00000543468.5@EPS8	ENST00000543468.5	protein_coding	15789161,15682893,15681226,15670856,15669664,15669387,15666440,15662026,15660614,15658497,15658079,15654145,15650823,15647127,15641722,15640703,15631442,15624227,15623158,15620158	15789370,15682972,15681302,15670923,15669825,15669536,15666522,15662099,15660740,15658585,15658153,15654293,15651006,15647260,15641830,15640846,15631664,15624407,15623287,15621430	Gene ID= ENSG00000151491.12 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr12	15882395	15903478	15882395	15903478	+	ENST00000419869.6@STRAP	ENST00000419869.6	protein_coding	15882395,15883541,15889928,15890597,15894047,15895359,15897882,15899904,15900947,15902917	15882819,15883676,15890009,15890669,15894143,15895496,15898018,15900053,15901012,15903478	Gene ID= ENSG00000023734.10 TPM= 422.81 Transcript Type= protein_coding
chr12	15882391	15903442	15882391	15903442	+	ENST00000541731.1@STRAP	ENST00000541731.1	protein_coding	15882391,15889928,15890597,15894047,15895359,15897882,15899904,15900947,15902917	15882819,15890009,15890669,15894143,15895496,15898018,15900053,15901012,15903442	Gene ID= ENSG00000023734.10 TPM= 54.06 Transcript Type= nonsense_mediated_decay
chr12	15911172	16037282	15911172	16037282	+	ENST00000428559.6@DERA	ENST00000428559.6	protein_coding	15911172,15956936,15958188,15959829,15962813,15982308,16032542,16036232,16036690	15911414,15957033,15958335,15959924,15962947,15982436,16032654,16036381,16037282	Gene ID= ENSG00000023697.12 TPM= 21.24 Transcript Type= protein_coding
chr12	16347649	16364403	16347649	16364403	+	ENST00000396210.7@MGST1	ENST00000396210.7	protein_coding	16347649,16354231,16357605,16363795	16347710,16354378,16357699,16364403	Gene ID= ENSG00000008394.12 TPM= 12.55 Transcript Type= protein_coding
chr12	19439699	19520224	19439699	19520224	+	ENST00000266508.13@AEBP2	ENST00000266508.13	protein_coding	19439699,19462510,19473248,19493800,19500097,19512398,19514671,19518087	19440370,19462717,19473355,19493986,19500221,19512465,19514784,19520224	Gene ID= ENSG00000139154.14 TPM= 9.65 Transcript Type= protein_coding
chr12	19439674	19522239	19439674	19522239	+	ENST00000398864.7@AEBP2	ENST00000398864.7	protein_coding	19439674,19462510,19473248,19493800,19500097,19512398,19514671,19518087,19518675	19440370,19462717,19473355,19493986,19500221,19512465,19514784,19518113,19522239	Gene ID= ENSG00000139154.14 TPM= 1.93 Transcript Type= protein_coding
chr12	21437677	21471252	21437677	21471252	+	ENST00000240651.13@PYROXD1	ENST00000240651.13	protein_coding	21437677,21440368,21445347,21449563,21452081,21455132,21455995,21461025,21462008,21462740,21467481,21468506	21437814,21440448,21445466,21449691,21452154,21455292,21456095,21461154,21462120,21462862,21467618,21471252	Gene ID= ENSG00000121350.15 TPM= 2.9 Transcript Type= protein_coding
chr12	21468911	21501633	21468911	21501633	-	transcript1028.chr12.nic@RECQL	transcript1028.chr12.nic	protein_coding	21501481,21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911	21501633,21501215,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346	Gene ID= ENSG00000004700.15 TPM= 1.93 Transcript Type= NA
chr12	21468911	21501634	21468911	21501634	-	transcript1030.chr12.nic@RECQL	transcript1030.chr12.nic	protein_coding	21501481,21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911	21501634,21501372,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346	Gene ID= ENSG00000004700.15 TPM= 1.93 Transcript Type= NA
chr12	21468911	21501593	21468911	21501593	-	ENST00000444129.6@RECQL	ENST00000444129.6	protein_coding	21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911	21501593,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346	Gene ID= ENSG00000004700.15 TPM= 12.55 Transcript Type= protein_coding
chr12	21501815	21518408	21501815	21518408	+	ENST00000229314.9@GOLT1B	ENST00000229314.9	protein_coding	21501815,21506885,21508383,21512295,21515669	21501948,21506976,21508561,21512376,21518408	Gene ID= ENSG00000111711.9 TPM= 5.79 Transcript Type= protein_coding
chr12	21501829	21516239	21501829	21516239	+	ENST00000539025.5@GOLT1B	ENST00000539025.5	protein_coding	21501829,21506885,21507944,21508383,21512295,21515669	21501948,21506976,21508109,21508561,21512376,21516239	Gene ID= ENSG00000111711.9 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	21635342	21657842	21635342	21657842	-	ENST00000350669.5@LDHB	ENST00000350669.5	protein_coding	21657751,21654543,21646899,21643935,21641952,21638353,21637071,21635342	21657842,21654677,21647016,21644108,21642125,21638470,21637194,21635709	Gene ID= ENSG00000111716.12 TPM= 76.26 Transcript Type= protein_coding
chr12	21764955	21774821	21764955	21774821	-	ENST00000240662.2@KCNJ8	ENST00000240662.2	protein_coding	21774546,21773243,21764955	21774821,21773686,21766623	Gene ID= ENSG00000121361.3 TPM= 4.83 Transcript Type= protein_coding
chr12	21800604	21941365	21800604	21941365	-	transcript1074.chr12.nnic@ABCC9	transcript1074.chr12.nnic	protein_coding	21941200,21940710,21936533,21933782,21925942,21916937,21915668,21912872,21910826,21910157,21908077,21906126,21895275,21894032,21887826,21882766,21875654,21872625,21864439,21862953,21860971,21859586,21852368,21852097,21848150,21845603,21844767,21844483,21842314,21838078,21828958,21818150,21817187,21815763,21814644,21812049,21809852,21807346,21805998,21805136,21800604	21941365,21940825,21936694,21933923,21926063,21917103,21915910,21913066,21910978,21910312,21908211,21906288,21895315,21894174,21887934,21882873,21875726,21872730,21864477,21863054,21861055,21859666,21852505,21852222,21848246,21845832,21844915,21844552,21842471,21838170,21829060,21818251,21817307,21815893,21814722,21812157,21809955,21807479,21806060,21805311,21801181	Gene ID= ENSG00000069431.11 TPM= 5.79 Transcript Type= NA
chr12	21922969	21941233	21922969	21941233	-	transcript1086.chr12.nic@ABCC9	transcript1086.chr12.nic	protein_coding	21941200,21940710,21936533,21933782,21925942,21922969	21941233,21940825,21936694,21933923,21926063,21923856	Gene ID= ENSG00000069431.11 TPM= 4.83 Transcript Type= NA
chr12	21941328	21943014	21941328	21943014	+	transcript1089.chr12.nnic@NA	transcript1089.chr12.nnic	NA	21941328	21943014	Gene ID= novel_gene_chr12_1090 TPM= 2.9 Transcript Type= NA
chr12	22046174	22065663	22046174	22065663	+	ENST00000229329.6@CMAS	ENST00000229329.6	protein_coding	22046174,22055149,22055455,22058567,22060832,22061281,22062281,22065121	22046563,22055291,22055610,22058700,22060926,22061452,22062434,22065663	Gene ID= ENSG00000111726.12 TPM= 113.26 Transcript Type= protein_coding
chr12	22046225	22065674	22046225	22065674	+	ENST00000534981.5@CMAS	ENST00000534981.5	protein_coding	22046225,22055149,22055455,22058567,22060832,22062281,22065121	22046563,22055291,22055610,22058700,22060926,22062434,22065674	Gene ID= ENSG00000111726.12 TPM= 9.01 Transcript Type= nonsense_mediated_decay
chr12	22625075	22690665	22625075	22690665	+	ENST00000266517.8@ETNK1	ENST00000266517.8	protein_coding	22625075,22643763,22659014,22661063,22671272,22673500,22684483,22684882	22625586,22644022,22659154,22661205,22671355,22673660,22684556,22690665	Gene ID= ENSG00000139163.15 TPM= 1.93 Transcript Type= protein_coding
chr12	22625164	22656815	22625164	22656815	+	transcript1102.chr12.nnic@ETNK1	transcript1102.chr12.nnic	protein_coding	22625164,22643763,22656432	22625586,22644022,22656815	Gene ID= ENSG00000139163.15 TPM= 3.86 Transcript Type= NA
chr12	25195216	25205014	25195216	25205014	+	ENST00000381356.8@ETFRF1	ENST00000381356.8	protein_coding	25195216,25203920,25204091	25195337,25204007,25205014	Gene ID= ENSG00000205707.10 TPM= 28.96 Transcript Type= protein_coding
chr12	25195265	25205015	25195265	25205015	+	ENST00000556885.5@ETFRF1	ENST00000556885.5	protein_coding	25195265,25203920,25204091	25195337,25204007,25205015	Gene ID= ENSG00000205707.10 TPM= 4.83 Transcript Type= protein_coding
chr12	25204789	25250931	25204789	25250931	-	ENST00000311936.7@KRAS	ENST00000311936.7	protein_coding	25250751,25245274,25227234,25225614,25204789	25250931,25245395,25227412,25225773,25209911	Gene ID= ENSG00000133703.11 TPM= 2.9 Transcript Type= protein_coding
chr12	25954921	25958557	25954921	25958557	-	transcript1129.chr12.nic@RASSF8-AS1	transcript1129.chr12.nic	antisense_RNA	25958019,25956639,25956227,25954921	25958557,25956761,25956347,25955241	Gene ID= ENSG00000246695.7 TPM= 1.93 Transcript Type= NA
chr12	25958614	26072869	25958614	26072869	+	transcript1120.chr12.nic@RASSF8	transcript1120.chr12.nic	protein_coding	25958614,25995037,26055236,26064498,26067569,26068697	25959148,25995130,26055446,26065387,26067713,26072869	Gene ID= ENSG00000123094.15 TPM= 11.75 Transcript Type= NA
chr12	25958687	26072869	25958687	26072869	+	transcript1122.chr12.nic@RASSF8	transcript1122.chr12.nic	protein_coding	25958687,25995037,26055279,26064498,26067569,26068697	25959148,25995130,26055446,26065387,26067713,26072869	Gene ID= ENSG00000123094.15 TPM= 8.37 Transcript Type= NA
chr12	25958707	26072869	25958707	26072869	+	transcript1125.chr12.nic@RASSF8	transcript1125.chr12.nic	protein_coding	25958707,26055279,26064498,26067569,26068697	25959148,26055446,26065387,26067713,26072869	Gene ID= ENSG00000123094.15 TPM= 3.54 Transcript Type= NA
chr12	26120416	26122700	26120416	26122700	-	transcript1146.chr12.nnic@NA	transcript1146.chr12.nnic	NA	26120416	26122700	Gene ID= novel_gene_chr12_1147 TPM= 10.62 Transcript Type= NA
chr12	26195340	26234779	26195340	26234779	+	ENST00000422622.3@SSPN	ENST00000422622.3	protein_coding	26195340,26224293,26230711	26195531,26224379,26234779	Gene ID= ENSG00000123096.11 TPM= 4.83 Transcript Type= protein_coding
chr12	26195496	26232955	26195496	26232955	+	ENST00000242729.6@SSPN	ENST00000242729.6	protein_coding	26195496,26224293,26230711	26195951,26224379,26232955	Gene ID= ENSG00000123096.11 TPM= 27.03 Transcript Type= protein_coding
chr12	26831649	26833207	26831649	26833207	-	transcript1154.chr12.nnic@NA	transcript1154.chr12.nnic	NA	26831649	26833207	Gene ID= novel_gene_chr12_1155 TPM= 2.9 Transcript Type= NA
chr12	26905181	26938321	26905181	26938321	-	ENST00000261191.11@INTS13	ENST00000261191.11	protein_coding	26937796,26936579,26934556,26928703,26928205,26925761,26924355,26922616,26917644,26917352,26916002,26914408,26913974,26913457,26911178,26906302,26905181	26938321,26936814,26934630,26928905,26928285,26925851,26924483,26922700,26917733,26917441,26916180,26914578,26914128,26913687,26911317,26906437,26905536	Gene ID= ENSG00000064102.14 TPM= 16.41 Transcript Type= protein_coding
chr12	26905181	26937999	26905181	26937999	-	transcript1161.chr12.nic@INTS13	transcript1161.chr12.nic	protein_coding	26937796,26936579,26934556,26928703,26928205,26925761,26924355,26922616,26917644,26917352,26916002,26913974,26913457,26911178,26906302,26905181	26937999,26936814,26934630,26928905,26928285,26925851,26924483,26922700,26917733,26917441,26916180,26914128,26913687,26911317,26906437,26905536	Gene ID= ENSG00000064102.14 TPM= 2.9 Transcript Type= NA
chr12	26938383	26966553	26938383	26966553	+	ENST00000229395.7@FGFR1OP2	ENST00000229395.7	protein_coding	26938383,26954145,26956543,26957601,26960515,26963342,26964596	26938710,26954293,26956660,26957743,26960628,26963455,26966553	Gene ID= ENSG00000111790.13 TPM= 4.83 Transcript Type= protein_coding
chr12	26938500	26966650	26938500	26966650	+	ENST00000327214.5@FGFR1OP2	ENST00000327214.5	protein_coding	26938500,26954145,26956543,26957601,26963342,26964596	26938710,26954293,26956660,26957743,26963455,26966650	Gene ID= ENSG00000111790.13 TPM= 10.62 Transcript Type= protein_coding
chr12	26973195	27014394	26973195	27014394	-	ENST00000343028.8@TM7SF3	ENST00000343028.8	protein_coding	27014078,27003236,26999526,26996742,26995237,26990450,26982773,26980566,26979784,26976260,26975496,26973195	27014394,27003390,26999676,26996862,26995408,26990627,26982859,26980646,26979936,26976357,26975658,26974227	Gene ID= ENSG00000064115.10 TPM= 1.93 Transcript Type= protein_coding
chr12	26973650	27014384	26973650	27014384	-	transcript1173.chr12.nnic@TM7SF3	transcript1173.chr12.nnic	protein_coding	27014078,27003236,26999526,26996742,26995237,26982773,26980566,26979784,26976260,26975496,26973650	27014384,27003390,26999676,26996862,26995408,26982859,26980646,26979936,26976357,26975658,26974227	Gene ID= ENSG00000064115.10 TPM= 3.86 Transcript Type= NA
chr12	27022550	27029749	27022550	27029749	+	ENST00000282892.3@MED21	ENST00000282892.3	protein_coding	27022550,27026420,27027347,27028285	27022621,27026534,27027447,27029749	Gene ID= ENSG00000152944.8 TPM= 50.2 Transcript Type= protein_coding
chr12	27524140	27693346	27524140	27693346	+	transcript1208.chr12.nic@PPFIBP1	transcript1208.chr12.nic	protein_coding	27524140,27578152,27633362,27634910,27646062,27647729,27650010,27654722,27655143,27656616,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27677064,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796	27524365,27578239,27633460,27635115,27646148,27647842,27650141,27654814,27655235,27656730,27660945,27664437,27667320,27671546,27672483,27673827,27674221,27676599,27677096,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27693346	Gene ID= ENSG00000110841.13 TPM= 2.9 Transcript Type= NA
chr12	27710773	27756295	27710773	27756295	+	ENST00000081029.7@MRPS35	ENST00000081029.7	protein_coding	27710773,27714780,27716291,27719808,27724047,27735447,27737539,27755181	27710955,27714820,27716458,27719868,27724186,27735556,27737608,27756295	Gene ID= ENSG00000061794.12 TPM= 210.92 Transcript Type= protein_coding
chr12	27710835	27756294	27710835	27756294	+	ENST00000538315.5@MRPS35	ENST00000538315.5	protein_coding	27710835,27714780,27716291,27719808,27724047,27737539,27755181	27710955,27714820,27716458,27719868,27724186,27737608,27756294	Gene ID= ENSG00000061794.12 TPM= 15.93 Transcript Type= protein_coding
chr12	27780020	27803040	27780020	27803040	+	ENST00000381271.6@KLHL42	ENST00000381271.6	protein_coding	27780020,27791708,27797715	27781202,27791901,27803040	Gene ID= ENSG00000087448.9 TPM= 3.86 Transcript Type= protein_coding
chr12	28190426	28550165	28190426	28550165	+	transcript1229.chr12.nic@CCDC91	transcript1229.chr12.nic	protein_coding	28190426,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478,28484052,28549063	28190641,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452654,28484165,28550165	Gene ID= ENSG00000123106.10 TPM= 6.27 Transcript Type= NA
chr12	28190427	28550166	28190427	28550166	+	ENST00000539107.5@CCDC91	ENST00000539107.5	protein_coding	28190427,28257202,28259364,28305649,28306742,28307645,28362438,28450161,28450350,28452478,28484052,28549063	28190641,28257245,28259442,28305806,28306945,28307749,28362515,28450253,28450418,28452654,28484165,28550166	Gene ID= ENSG00000123106.10 TPM= 1.45 Transcript Type= protein_coding
chr12	29342419	29381183	29342419	29381183	-	transcript1252.chr12.nic@ERGIC2	transcript1252.chr12.nic	protein_coding	29381115,29371528,29370114,29368241,29366877,29361645,29357623,29356382,29350013,29349079,29345443,29342419	29381183,29371670,29370222,29368287,29366947,29361685,29357724,29356477,29350068,29349177,29345540,29343282	Gene ID= ENSG00000087502.17 TPM= 1.93 Transcript Type= NA
chr12	29505982	29783942	29505982	29783942	-	transcript1262.chr12.nnic@TMTC1	transcript1262.chr12.nnic	protein_coding	29783450,29767898,29758704,29755709,29660804,29659880,29633147,29604178,29583407,29572105,29556857,29536209,29520618,29518472,29517427,29516349,29514482,29512043,29505982	29783942,29768075,29758777,29755885,29660885,29659983,29633336,29604299,29583574,29572218,29557000,29536317,29520720,29518607,29517571,29516486,29514604,29512120,29506986	Gene ID= ENSG00000133687.15 TPM= 6.27 Transcript Type= NA
chr12	29505982	29783942	29505982	29783942	-	transcript1265.chr12.nnic@TMTC1	transcript1265.chr12.nnic	protein_coding	29783450,29767898,29758704,29755709,29633147,29604178,29583407,29572105,29556857,29536209,29520618,29518472,29517427,29516349,29514482,29512043,29505982	29783942,29768075,29758777,29755885,29633336,29604299,29583574,29572218,29557000,29536317,29520720,29518607,29517571,29516486,29514604,29512120,29506986	Gene ID= ENSG00000133687.15 TPM= 4.34 Transcript Type= NA
chr12	29502340	29506372	29502340	29506372	-	transcript1276.chr12.nnic@NA	transcript1276.chr12.nnic	NA	29502340	29506372	Gene ID= novel_gene_chr12_1277 TPM= 3.86 Transcript Type= NA
chr12	30628988	30695986	30628988	30695986	-	ENST00000256079.8@IPO8	ENST00000256079.8	protein_coding	30695564,30690496,30684301,30681659,30680482,30676498,30674659,30673990,30670962,30669183,30666175,30665729,30665220,30663489,30662327,30661141,30656684,30652967,30652192,30649137,30639515,30636982,30634083,30631895,30628988	30695986,30690577,30684457,30681817,30680638,30676587,30674753,30674074,30671096,30669282,30666251,30665845,30665309,30663654,30662487,30661266,30656750,30653092,30652289,30649232,30639735,30637187,30634286,30632011,30630957	Gene ID= ENSG00000133704.9 TPM= 10.62 Transcript Type= protein_coding
chr12	30709553	30754514	30709553	30754514	-	ENST00000454014.6@CAPRIN2	ENST00000454014.6	protein_coding	30753344,30751071,30741020,30734968,30731343,30730239,30728648,30725966,30724370,30723259,30720811,30719079,30716508,30714959,30713785,30711566,30709553	30754514,30751133,30741106,30735206,30731510,30730282,30729325,30726088,30724451,30723314,30720915,30719225,30716676,30715141,30713885,30711629,30710470	Gene ID= ENSG00000110888.17 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	31073876	31104791	31073876	31104791	+	ENST00000435753.6@DDX11	ENST00000435753.6	protein_coding	31073876,31078390,31083813,31084583,31084969,31086025,31087938,31089044,31089403,31089891,31091719,31092846,31093245,31094590,31094755,31096341,31096637,31096859,31097885,31100635,31100999,31101833,31102243,31102427,31102936,31103317,31103577	31074091,31078537,31084061,31084669,31085126,31086212,31087983,31089151,31089490,31090094,31091871,31092892,31093324,31094634,31094822,31096379,31096745,31096990,31097997,31100707,31101130,31101982,31102311,31102527,31103020,31103395,31104791	Gene ID= ENSG00000013573.16 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	31588616	31590492	31588616	31590492	-	transcript1297.chr12.nnic@NA	transcript1297.chr12.nnic	NA	31588616	31590492	Gene ID= novel_gene_chr12_1298 TPM= 2.9 Transcript Type= NA
chr12	31959396	31993103	31959396	31993103	+	transcript1314.chr12.nnic@KIAA1551	transcript1314.chr12.nnic	protein_coding	31959396,31960777,31970189,31992378	31959491,31960871,31970356,31993103	Gene ID= ENSG00000174718.11 TPM= 1.93 Transcript Type= NA
chr12	32399529	32640533	32399529	32640533	+	ENST00000534526.6@FGD4	ENST00000534526.6	protein_coding	32399529,32564137,32576266,32581960,32598497,32601278,32602161,32607957,32610776,32611137,32619698,32624422,32624976,32625654,32633549,32638655,32640276	32399959,32564289,32576449,32582467,32598586,32601423,32602317,32608095,32610834,32611283,32619870,32624452,32625068,32625779,32633689,32638795,32640533	Gene ID= ENSG00000139132.14 TPM= 1.93 Transcript Type= protein_coding
chr12	32640292	32644900	32640292	32644900	+	transcript1321.chr12.nnic@NA	transcript1321.chr12.nnic	NA	32640292	32644900	Gene ID= novel_gene_chr12_1322 TPM= 1.93 Transcript Type= NA
chr12	32679303	32743612	32679303	32743612	+	transcript1328.chr12.nic@DNM1L	transcript1328.chr12.nic	protein_coding	32679303,32701415,32707367,32708153,32710929,32711180,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32740064,32740409,32742589,32743354	32679465,32701562,32707413,32708224,32711015,32711272,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32740240,32740518,32742748,32743612	Gene ID= ENSG00000087470.17 TPM= 2.41 Transcript Type= NA
chr12	32679200	32745552	32679200	32745552	+	ENST00000452533.6@DNM1L	ENST00000452533.6	protein_coding	32679200,32701415,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32738264,32740064,32740409,32742589,32743354	32679465,32701562,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32738296,32740240,32740518,32742748,32745552	Gene ID= ENSG00000087470.17 TPM= 3.38 Transcript Type= protein_coding
chr12	32679290	32743612	32679290	32743612	+	ENST00000549701.5@DNM1L	ENST00000549701.5	protein_coding	32679290,32701415,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32737865,32738264,32740064,32740409,32742589,32743354	32679465,32701562,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32737942,32738296,32740240,32740518,32742748,32743612	Gene ID= ENSG00000087470.17 TPM= 1.45 Transcript Type= protein_coding
chr12	32679323	32745549	32679323	32745549	+	ENST00000381000.8@DNM1L	ENST00000381000.8	protein_coding	32679323,32701415,32705825,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32737865,32740064,32740409,32742589,32743354	32679465,32701562,32705863,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32737942,32740240,32740518,32742748,32745549	Gene ID= ENSG00000087470.17 TPM= 3.38 Transcript Type= protein_coding
chr12	32725247	32755894	32725247	32755894	-	transcript1350.chr12.nnic@YARS2	transcript1350.chr12.nnic	protein_coding	32755096,32753918,32750719,32747076,32725247	32755894,32754085,32750874,32747363,32725365	Gene ID= ENSG00000139131.12 TPM= 1.93 Transcript Type= NA
chr12	32746544	32755902	32746544	32755902	-	ENST00000324868.12@YARS2	ENST00000324868.12	protein_coding	32755096,32753918,32750719,32749937,32746544	32755902,32754085,32750874,32750107,32747363	Gene ID= ENSG00000139131.12 TPM= 2.9 Transcript Type= protein_coding
chr12	32790745	32896840	32790745	32896840	-	ENST00000340811.8@PKP2	ENST00000340811.8	protein_coding	32896509,32878920,32877846,32868927,32850766,32841028,32824045,32822467,32821356,32802403,32796109,32792644,32790745	32896840,32879032,32878543,32869062,32850973,32841205,32824162,32822631,32821529,32802556,32796298,32792731,32792492	Gene ID= ENSG00000057294.14 TPM= 12.55 Transcript Type= protein_coding
chr12	39351809	39443400	39351809	39443400	-	transcript1368.chr12.nic@KIF21A	transcript1368.chr12.nic	protein_coding	39442927,39370039,39369729,39367883,39367030,39366350,39363098,39358178,39357248,39356832,39351809	39443400,39370261,39369911,39368032,39367164,39366517,39363213,39358373,39357437,39356895,39351980	Gene ID= ENSG00000139116.18 TPM= 16.41 Transcript Type= NA
chr12	39439300	39441678	39439300	39441678	+	transcript1369.chr12.nnic@NA	transcript1369.chr12.nnic	NA	39439300	39441678	Gene ID= novel_gene_chr12_1370 TPM= 5.79 Transcript Type= NA
chr12	40223076	40224915	40223076	40224915	-	ENST00000618127.1@AC079630.1	ENST00000618127.1	antisense_RNA	40223076	40224915	Gene ID= ENSG00000225342.2 TPM= 2.9 Transcript Type= antisense_RNA
chr12	42081845	42144879	42081845	42144879	-	ENST00000398675.7@GXYLT1	ENST00000398675.7	protein_coding	42144426,42129759,42119000,42109566,42105818,42097910,42097442,42081845	42144879,42129851,42119171,42109691,42106069,42098033,42097614,42087947	Gene ID= ENSG00000151233.10 TPM= 1.93 Transcript Type= protein_coding
chr12	42161699	42238352	42161699	42238352	-	transcript1398.chr12.nic@YAF2	transcript1398.chr12.nic	protein_coding	42238155,42237599,42161699	42238352,42237724,42161765	Gene ID= ENSG00000015153.14 TPM= 6.76 Transcript Type= NA
chr12	42326151	42441955	42326151	42441955	+	transcript1406.chr12.nic@PPHLN1	transcript1406.chr12.nic	protein_coding	42326151,42335883,42355161,42374863,42384940,42387456,42393570,42398854,42441315	42326229,42335974,42355222,42375074,42384996,42387535,42393689,42398994,42441955	Gene ID= ENSG00000134283.17 TPM= 2.9 Transcript Type= NA
chr12	42326145	42441950	42326145	42441950	+	ENST00000395580.7@PPHLN1	ENST00000395580.7	protein_coding	42326145,42332660,42335883,42351885,42355161,42374863,42384940,42387456,42393570,42398854,42441315	42326229,42332702,42335974,42352049,42355222,42375074,42384996,42387535,42393689,42398994,42441950	Gene ID= ENSG00000134283.17 TPM= 1.93 Transcript Type= protein_coding
chr12	42313901	42326137	42313901	42326137	-	transcript1418.chr12.nic@ZCRB1	transcript1418.chr12.nic	protein_coding	42325924,42324019,42322418,42317787,42317340,42313901	42326137,42324104,42322446,42317898,42317447,42313986	Gene ID= ENSG00000139168.7 TPM= 37.16 Transcript Type= NA
chr12	42312078	42326105	42312078	42326105	-	ENST00000266529.7@ZCRB1	ENST00000266529.7	protein_coding	42325924,42324019,42322418,42317787,42317340,42313874,42313690,42312078	42326105,42324104,42322446,42317898,42317447,42313986,42313765,42313198	Gene ID= ENSG00000139168.7 TPM= 2.41 Transcript Type= protein_coding
chr12	43793725	43806317	43793725	43806317	-	transcript1431.chr12.nic@TWF1	transcript1431.chr12.nic	protein_coding	43806221,43804495,43804176,43802286,43800435,43799398,43797708,43797302,43796976,43793725	43806317,43804572,43804240,43802464,43800530,43799502,43797833,43797452,43797097,43795755	Gene ID= ENSG00000151239.13 TPM= 2.41 Transcript Type= NA
chr12	43793723	43806375	43793723	43806375	-	ENST00000395510.6@TWF1	ENST00000395510.6	protein_coding	43806221,43804495,43802286,43800435,43799398,43797708,43797302,43796976,43793723	43806375,43804572,43802464,43800530,43799502,43797833,43797452,43797097,43795755	Gene ID= ENSG00000151239.13 TPM= 14.96 Transcript Type= protein_coding
chr12	43836098	44389758	43836098	44389758	+	ENST00000266534.7@TMEM117	ENST00000266534.7	protein_coding	43836098,43844624,43944210,44143525,44211290,44299580,44376595,44388026	43836196,43844928,43944342,44143624,44211387,44299739,44376724,44389758	Gene ID= ENSG00000139173.9 TPM= 4.83 Transcript Type= protein_coding
chr12	45216003	45432346	45216003	45432346	+	transcript1442.chr12.nnic@ANO6	transcript1442.chr12.nnic	protein_coding	45216003,45302014,45331295,45347022,45348028,45348518,45350659,45357290,45367688,45378053,45388161,45390421,45401795,45403072,45403439,45409357,45416699,45421071,45422957,45431250	45216391,45302093,45331423,45347087,45348315,45348631,45350774,45357424,45367793,45378113,45388303,45390498,45402020,45403241,45403536,45409487,45416904,45421273,45423062,45432346	Gene ID= ENSG00000177119.15 TPM= 7.24 Transcript Type= NA
chr12	45216120	45432351	45216120	45432351	+	ENST00000320560.12@ANO6	ENST00000320560.12	protein_coding	45216120,45302014,45331295,45347022,45348028,45348518,45350659,45357290,45367688,45378053,45388161,45390421,45401795,45403072,45403439,45409357,45416699,45421071,45422957,45429105	45216391,45302093,45331423,45347087,45348315,45348631,45350774,45357424,45367793,45378113,45388303,45390498,45402020,45403241,45403536,45409487,45416904,45421273,45423062,45432351	Gene ID= ENSG00000177119.15 TPM= 23.65 Transcript Type= protein_coding
chr12	45262545	45265479	45262545	45265479	+	transcript1451.chr12.nnic@NA	transcript1451.chr12.nnic	NA	45262545	45265479	Gene ID= novel_gene_chr12_1452 TPM= 1.93 Transcript Type= NA
chr12	45726025	45727806	45726025	45727806	-	transcript1453.chr12.nnic@NA	transcript1453.chr12.nnic	NA	45726025	45727806	Gene ID= novel_gene_chr12_1454 TPM= 24.13 Transcript Type= NA
chr12	45729665	45908040	45729665	45908040	+	ENST00000334344.10@ARID2	ENST00000334344.10	protein_coding	45729665,45730044,45731217,45811418,45817670,45821420,45836589,45836741,45837321,45837498,45839329,45846856,45848836,45849580,45850036,45860801,45891780,45892011,45893420,45893630,45904934	45729928,45730137,45731314,45811551,45817888,45821487,45836655,45836991,45837417,45837707,45839496,45846937,45848970,45849776,45852896,45860949,45891918,45892096,45893543,45893721,45908040	Gene ID= ENSG00000189079.15 TPM= 13.51 Transcript Type= protein_coding
chr12	45926716	45990616	45926716	45990616	-	transcript1464.chr12.nnic@SCAF11	transcript1464.chr12.nnic	protein_coding	45990353,45964107,45962915,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45926716	45990616,45964188,45963083,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859	Gene ID= ENSG00000139218.17 TPM= 7.08 Transcript Type= NA
chr12	45926716	45990616	45926716	45990616	-	transcript1466.chr12.nic@SCAF11	transcript1466.chr12.nic	protein_coding	45990353,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45926716	45990616,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859	Gene ID= ENSG00000139218.17 TPM= 27.83 Transcript Type= NA
chr12	45960455	45990726	45960455	45990726	-	transcript1470.chr12.nnic@SCAF11	transcript1470.chr12.nnic	protein_coding	45990353,45964107,45962915,45961700,45960455	45990726,45964188,45963083,45961857,45961322	Gene ID= ENSG00000139218.17 TPM= 4.83 Transcript Type= NA
chr12	45960455	45990580	45960455	45990580	-	ENST00000395453.2@SCAF11	ENST00000395453.2	protein_coding	45990353,45964107,45961700,45960455	45990580,45964188,45961857,45961322	Gene ID= ENSG00000139218.17 TPM= 27.03 Transcript Type= protein_coding
chr12	46187801	46267658	46187801	46267658	-	transcript1477.chr12.nic@SLC38A1	transcript1477.chr12.nic	protein_coding	46267225,46243200,46239679,46229564,46229153,46209054,46207529,46207155,46206080,46204532,46204301,46203010,46201098,46198625,46197919,46197720,46187801	46267658,46243314,46239893,46229639,46229268,46209127,46207621,46207236,46206162,46204590,46204417,46203089,46201198,46198743,46198060,46197817,46189071	Gene ID= ENSG00000111371.15 TPM= 2.9 Transcript Type= NA
chr12	46183063	46269012	46183063	46269012	-	ENST00000398637.9@SLC38A1	ENST00000398637.9	protein_coding	46268526,46243200,46239679,46229564,46229153,46209054,46207529,46207155,46206080,46204532,46204301,46203010,46201098,46198625,46197919,46197720,46183063	46269012,46243314,46239893,46229639,46229268,46209127,46207621,46207236,46206162,46204590,46204417,46203089,46201198,46198743,46198060,46197817,46189071	Gene ID= ENSG00000111371.15 TPM= 48.27 Transcript Type= protein_coding
chr12	46358189	46372867	46358189	46372867	-	ENST00000256689.9@SLC38A2	ENST00000256689.9	protein_coding	46372509,46371178,46370776,46370512,46367267,46367076,46366864,46365107,46364644,46364389,46363924,46363726,46363021,46362494,46362284,46358189	46372867,46371379,46370857,46370627,46367340,46367168,46366945,46365189,46364702,46364556,46364003,46363826,46363145,46362638,46362381,46361209	Gene ID= ENSG00000134294.13 TPM= 156.86 Transcript Type= protein_coding
chr12	46358481	46372771	46358481	46372771	-	ENST00000549258.5@SLC38A2	ENST00000549258.5	protein_coding	46372509,46371178,46370776,46367267,46367076,46366864,46365107,46364644,46364389,46363924,46363726,46363021,46362494,46362284,46358481	46372771,46371379,46370857,46367340,46367168,46366945,46365189,46364702,46364556,46364003,46363826,46363145,46362638,46362381,46361209	Gene ID= ENSG00000134294.13 TPM= 6.27 Transcript Type= nonsense_mediated_decay
chr12	46764761	46803720	46764761	46803720	-	transcript1498.chr12.nic@SLC38A4	transcript1498.chr12.nic	protein_coding	46803603,46792953,46788528,46787916,46785104,46784542,46779949,46779780,46779611,46778501,46778289,46776904,46775049,46769284,46768310,46764761	46803720,46793183,46788618,46788031,46785177,46784634,46780030,46779862,46779669,46778776,46778368,46777004,46775173,46769428,46768407,46766802	Gene ID= ENSG00000139209.15 TPM= 5.79 Transcript Type= NA
chr12	46764761	46831887	46764761	46831887	-	transcript1499.chr12.nnic@SLC38A4	transcript1499.chr12.nnic	protein_coding	46831755,46792953,46788528,46787916,46785104,46784542,46779949,46779780,46779611,46778501,46778289,46776904,46775049,46769284,46768310,46764761	46831887,46793185,46788618,46788031,46785177,46784634,46780030,46779862,46779669,46778776,46778368,46777004,46775173,46769428,46768407,46766802	Gene ID= ENSG00000139209.15 TPM= 2.9 Transcript Type= NA
chr12	47661249	47706061	47661249	47706061	-	ENST00000005386.7@RPAP3	ENST00000005386.7	protein_coding	47705952,47702688,47701464,47697597,47696276,47690518,47689125,47687876,47686780,47681696,47679704,47679493,47670107,47668916,47667754,47666980,47661249	47706061,47702846,47701604,47697719,47696403,47690639,47689195,47688001,47686907,47681817,47679774,47679594,47670345,47669102,47667851,47667080,47663590	Gene ID= ENSG00000005175.9 TPM= 4.83 Transcript Type= protein_coding
chr12	47663293	47705986	47663293	47705986	-	ENST00000380650.4@RPAP3	ENST00000380650.4	protein_coding	47705952,47702688,47701464,47697597,47696276,47690518,47689125,47687876,47686780,47681696,47679704,47670107,47668916,47667754,47666980,47663293	47705986,47702846,47701604,47697719,47696403,47690639,47689195,47688001,47686907,47681817,47679774,47670345,47669102,47667851,47667080,47663590	Gene ID= ENSG00000005175.9 TPM= 1.93 Transcript Type= protein_coding
chr12	47737256	47758147	47737256	47758147	-	transcript1510.chr12.nic@RAPGEF3	transcript1510.chr12.nic	protein_coding	47757866,47751916,47751723,47751399,47751048,47750341,47749930,47749741,47749390,47748819,47748454,47748074,47747712,47747544,47746860,47743987,47743530,47741505,47740915,47740642,47740305,47740141,47739143,47738690,47738193,47738022,47737256	47758147,47751969,47751829,47751520,47751216,47750425,47749990,47749817,47749536,47748931,47748542,47748152,47747862,47747626,47746899,47744068,47743676,47741602,47741040,47740823,47740395,47740191,47739230,47738754,47738247,47738093,47737685	Gene ID= ENSG00000079337.15 TPM= 4.83 Transcript Type= NA
chr12	47753893	47781670	47753893	47781670	+	transcript1519.chr12.nnic@SLC48A1	transcript1519.chr12.nnic	protein_coding	47753893,47755702,47760216,47772170,47779028,47780145	47754027,47755912,47760401,47772320,47779195,47781670	Gene ID= ENSG00000211584.13 TPM= 2.9 Transcript Type= NA
chr12	47773208	47782753	47773208	47782753	+	ENST00000442218.2@SLC48A1	ENST00000442218.2	protein_coding	47773208,47779028,47780145	47773440,47779195,47782753	Gene ID= ENSG00000211584.13 TPM= 52.13 Transcript Type= protein_coding
chr12	47963580	47968878	47963580	47968878	+	transcript1530.chr12.nic@TMEM106C	transcript1530.chr12.nic	protein_coding	47963580,47964209,47965282,47966089,47968133	47963633,47964423,47965997,47967261,47968878	Gene ID= ENSG00000134291.11 TPM= 1.93 Transcript Type= NA
chr12	48105923	48146104	48105923	48146104	+	ENST00000340802.10@PFKM	ENST00000340802.10	protein_coding	48105923,48107365,48108072,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48106137,48107455,48108194,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104	Gene ID= ENSG00000152556.15 TPM= 5.76 Transcript Type= protein_coding
chr12	48119226	48146404	48119226	48146404	+	ENST00000359794.9@PFKM	ENST00000359794.9	protein_coding	48119226,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48119406,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146404	Gene ID= ENSG00000152556.15 TPM= 293.24 Transcript Type= protein_coding
chr12	48119343	48146104	48119343	48146104	+	ENST00000546964.5@PFKM	ENST00000546964.5	protein_coding	48119343,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48119406,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104	Gene ID= ENSG00000152556.15 TPM= 4.47 Transcript Type= retained_intron
chr12	48122647	48146404	48122647	48146404	+	ENST00000312352.11@PFKM	ENST00000312352.11	protein_coding	48122647,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48122677,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146404	Gene ID= ENSG00000152556.15 TPM= 15.23 Transcript Type= protein_coding
chr12	48122647	48146104	48122647	48146104	+	ENST00000547587.5@PFKM	ENST00000547587.5	protein_coding	48122647,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104	Gene ID= ENSG00000152556.15 TPM= 957.56 Transcript Type= protein_coding
chr12	48340008	48350930	48340008	48350930	-	transcript1635.chr12.nnic@ZNF641	transcript1635.chr12.nnic	protein_coding	48350786,48347907,48347252,48344599,48340008	48350930,48348115,48347343,48344712,48343727	Gene ID= ENSG00000167528.12 TPM= 1.93 Transcript Type= NA
chr12	48653416	48682274	48653416	48682274	-	transcript1642.chr12.nic@KANSL2	transcript1642.chr12.nic	protein_coding	48682187,48681382,48679655,48679036,48671799,48669106,48667693,48662560,48661195,48660366,48654941,48653416	48682274,48681641,48679833,48679150,48671962,48669272,48667789,48662654,48661243,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 3.86 Transcript Type= NA
chr12	48653416	48682274	48653416	48682274	-	transcript1647.chr12.nic@KANSL2	transcript1647.chr12.nic	protein_coding	48682187,48681382,48679655,48679036,48671799,48669106,48667693,48662560,48660366,48654941,48653416	48682274,48681641,48679833,48679150,48671962,48669272,48667789,48662654,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 4.83 Transcript Type= NA
chr12	48653416	48682274	48653416	48682274	-	transcript1652.chr12.nic@KANSL2	transcript1652.chr12.nic	protein_coding	48682187,48681382,48679655,48679036,48671799,48669106,48667693,48660468,48654941,48653416	48682274,48681641,48679833,48679150,48671962,48669272,48667789,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 11.58 Transcript Type= NA
chr12	48653416	48682225	48653416	48682225	-	ENST00000420613.6@KANSL2	ENST00000420613.6	protein_coding	48682187,48681382,48679655,48679036,48671799,48669106,48667693,48660366,48654941,48653416	48682225,48681641,48679833,48679150,48671962,48669272,48667789,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 71.43 Transcript Type= protein_coding
chr12	48688464	48716898	48688464	48716898	-	ENST00000261900.7@CCNT1	ENST00000261900.7	protein_coding	48716515,48714443,48705768,48701013,48699778,48698138,48695999,48695759,48688464	48716898,48714524,48705896,48701073,48699840,48698183,48696162,48695829,48694436	Gene ID= ENSG00000129315.10 TPM= 7.24 Transcript Type= protein_coding
chr12	48688458	48716998	48688458	48716998	-	ENST00000618666.4@CCNT1	ENST00000618666.4	protein_coding	48716515,48714443,48705768,48701013,48699778,48698138,48695759,48688458	48716998,48714524,48705896,48701073,48699840,48698183,48695829,48694436	Gene ID= ENSG00000129315.10 TPM= 2.41 Transcript Type= protein_coding
chr12	48766194	48789040	48766194	48789040	-	transcript1662.chr12.nic@ADCY6	transcript1662.chr12.nic	protein_coding	48788906,48782571,48778108,48777615,48777410,48777104,48776428,48776209,48775963,48775673,48775303,48774957,48774691,48774402,48773940,48773469,48772508,48772295,48771710,48770766,48768937,48766194	48789040,48783438,48778257,48777736,48777521,48777231,48776586,48776350,48776091,48775698,48775450,48775054,48774778,48774518,48774098,48773647,48772543,48772424,48771973,48770970,48769061,48768716	Gene ID= ENSG00000174233.11 TPM= 13.51 Transcript Type= NA
chr12	48829764	48852163	48829764	48852163	-	ENST00000308025.7@DDX23	ENST00000308025.7	protein_coding	48852084,48845574,48843940,48840013,48839844,48837942,48837524,48837281,48836894,48836569,48836121,48834320,48833277,48832422,48832078,48831142,48829764	48852163,48845782,48844050,48840106,48839909,48838080,48837657,48837393,48837037,48836794,48836266,48834497,48833519,48832573,48832186,48831316,48830692	Gene ID= ENSG00000174243.9 TPM= 83.02 Transcript Type= protein_coding
chr12	48921959	48925827	48921959	48925827	-	ENST00000550765.5@FKBP11	ENST00000550765.5	protein_coding	48925300,48925046,48924561,48924223,48923782,48921959	48925827,48925111,48924648,48924256,48923852,48922201	Gene ID= ENSG00000134285.10 TPM= 1.93 Transcript Type= protein_coding
chr12	48935723	48957551	48935723	48957551	-	ENST00000256682.8@ARF3	ENST00000256682.8	protein_coding	48957310,48940948,48939997,48939655,48935723	48957551,48941188,48940107,48939779,48939108	Gene ID= ENSG00000134287.9 TPM= 2.9 Transcript Type= protein_coding
chr12	48995149	49001058	48995149	49001058	-	transcript1682.chr12.nnic@DDN	transcript1682.chr12.nnic	protein_coding	49001013,48999079,48995149	49001058,48999150,48998666	Gene ID= ENSG00000181418.7 TPM= 166.03 Transcript Type= NA
chr12	48995149	48999309	48995149	48999309	-	ENST00000421952.2@DDN	ENST00000421952.2	protein_coding	48999079,48995149	48999309,48998666	Gene ID= ENSG00000181418.7 TPM= 172.79 Transcript Type= protein_coding
chr12	49002278	49018823	49002278	49018823	-	transcript1688.chr12.nic@PRKAG1	transcript1688.chr12.nic	protein_coding	49018732,49013062,49008426,49005743,49005462,49005306,49005120,49004964,49004507,49003757,49003558,49003144,49002278	49018823,49013110,49008599,49005852,49005543,49005364,49005165,49005018,49004633,49003922,49003595,49003290,49003006	Gene ID= ENSG00000181929.11 TPM= 10.14 Transcript Type= NA
chr12	49002281	49019197	49002281	49019197	-	ENST00000548065.5@PRKAG1	ENST00000548065.5	protein_coding	49018732,49013062,49005743,49005462,49005306,49005120,49004964,49004507,49003757,49003558,49003144,49002281	49019197,49013110,49005852,49005543,49005364,49005165,49005018,49004633,49003922,49003595,49003290,49003006	Gene ID= ENSG00000181929.11 TPM= 41.51 Transcript Type= protein_coding
chr12	49002312	49018787	49002312	49018787	-	ENST00000546531.5@PRKAG1	ENST00000546531.5	protein_coding	49018732,49013062,49005743,49005462,49005306,49005120,49004964,49004507,49003757,49003558,49003144,49002312	49018787,49013110,49005852,49005592,49005364,49005165,49005018,49004633,49003922,49003595,49003290,49003006	Gene ID= ENSG00000181929.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	49002278	49018764	49002278	49018764	-	ENST00000547306.5@PRKAG1	ENST00000547306.5	protein_coding	49018732,49013062,49005462,49005306,49005120,49004964,49004507,49003757,49003558,49003144,49002278	49018764,49013110,49005543,49005364,49005165,49005018,49004633,49003922,49003595,49003290,49003006	Gene ID= ENSG00000181929.11 TPM= 15.93 Transcript Type= protein_coding
chr12	49020403	49021128	49020403	49021128	-	transcript1694.chr12.nnic@NA	transcript1694.chr12.nnic	NA	49020403	49021128	Gene ID= novel_gene_chr12_1695 TPM= 1.93 Transcript Type= NA
chr12	49100733	49110675	49100733	49110675	-	transcript1701.chr12.nic@LMBR1L	transcript1701.chr12.nic	protein_coding	49110484,49105924,49104746,49104448,49103687,49103091,49102887,49102468,49102293,49102120,49100733	49110675,49107045,49104885,49104551,49103813,49103159,49102951,49102540,49102376,49102196,49101549	Gene ID= ENSG00000139636.15 TPM= 1.93 Transcript Type= NA
chr12	49127782	49131395	49127782	49131395	-	ENST00000336023.9@TUBA1B	ENST00000336023.9	protein_coding	49131298,49129500,49129242,49127782	49131395,49129722,49129390,49128938	Gene ID= ENSG00000123416.15 TPM= 194.99 Transcript Type= protein_coding
chr12	49127782	49272663	49127782	49272663	-	transcript1717.chr12.nnic@AC010173.1	transcript1717.chr12.nnic	antisense_RNA	49272459,49127782	49272663,49128011	Gene ID= ENSG00000258101.2 TPM= 8.69 Transcript Type= NA
chr12	49184796	49189324	49184796	49189324	-	ENST00000301071.11@TUBA1A	ENST00000301071.11	protein_coding	49188977,49186611,49186310,49184796	49189324,49186833,49186458,49185990	Gene ID= ENSG00000167552.13 TPM= 42.47 Transcript Type= protein_coding
chr12	49264907	49274603	49264907	49274603	+	ENST00000301072.10@TUBA1C	ENST00000301072.10	protein_coding	49264907,49269465,49269828,49272253	49265184,49269687,49269976,49274603	Gene ID= ENSG00000167553.15 TPM= 10.62 Transcript Type= protein_coding
chr12	49366905	49526365	49366905	49526365	+	ENST00000549412.5@SPATS2	ENST00000549412.5	protein_coding	49366905,49371228,49460770,49484590,49489465,49490682,49494741,49496833,49500070,49512862,49514555,49519073,49522751,49524682,49525944	49367587,49371290,49461037,49484669,49489573,49490731,49495002,49497009,49500205,49512905,49514613,49519182,49522853,49524896,49526365	Gene ID= ENSG00000123352.17 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr12	49558302	49568132	49558302	49568132	-	transcript1738.chr12.nic@MCRS1	transcript1738.chr12.nic	protein_coding	49568048,49566077,49565529,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558843,49558302	49568132,49566215,49565667,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970,49558729	Gene ID= ENSG00000187778.13 TPM= 22.2 Transcript Type= NA
chr12	49558302	49568145	49558302	49568145	-	transcript1739.chr12.nic@MCRS1	transcript1739.chr12.nic	protein_coding	49568048,49566077,49565529,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558843,49558302	49568145,49566841,49565667,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970,49558729	Gene ID= ENSG00000187778.13 TPM= 19.06 Transcript Type= NA
chr12	49558320	49568153	49558320	49568153	-	ENST00000343810.8@MCRS1	ENST00000343810.8	protein_coding	49568048,49566722,49566077,49565529,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558843,49558320	49568153,49566841,49566215,49565667,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970,49558729	Gene ID= ENSG00000187778.13 TPM= 70.47 Transcript Type= protein_coding
chr12	49623552	49643724	49623552	49643724	+	transcript1750.chr12.nic@PRPF40B	transcript1750.chr12.nic	protein_coding	49623552,49630545,49631401,49631860,49632596,49632855,49633014,49633427,49633637,49633886,49634332,49634538,49635099,49635365,49635843,49636716,49637470,49637733,49641908,49642235,49642580,49642930,49643223,49643691	49623593,49630625,49631544,49631925,49632623,49632880,49633124,49633547,49633661,49634092,49634455,49634602,49635263,49635473,49635993,49636849,49637584,49637824,49642024,49642372,49642675,49643016,49643397,49643724	Gene ID= ENSG00000110844.13 TPM= 12.55 Transcript Type= NA
chr12	49623436	49644665	49623436	49644665	+	ENST00000548825.6@PRPF40B	ENST00000548825.6	protein_coding	49623436,49630545,49631401,49631860,49632596,49632855,49633014,49633427,49633637,49633886,49634332,49634538,49635099,49635365,49635843,49636716,49637470,49637733,49641908,49642235,49642580,49642930,49643223,49643691,49643861,49644100	49623593,49630625,49631544,49631925,49632623,49632880,49633124,49633547,49633661,49634092,49634455,49634602,49635263,49635473,49635993,49636849,49637584,49637824,49642024,49642372,49642675,49643016,49643397,49643752,49644004,49644665	Gene ID= ENSG00000110844.13 TPM= 18.34 Transcript Type= protein_coding
chr12	49644931	49707454	49644931	49707454	-	transcript1747.chr12.nic@FMNL3	transcript1747.chr12.nic	protein_coding	49707055,49668471,49666127,49665832,49661966,49658442,49657082,49656823,49656404,49654910,49654192,49653725,49653226,49651933,49651382,49651168,49650676,49649691,49649470,49649259,49649029,49648193,49647703,49647276,49646886,49646639,49644931	49707454,49668554,49666207,49665908,49662049,49658594,49657190,49656899,49656497,49654984,49654302,49653874,49653327,49652212,49651450,49651292,49650878,49649925,49649538,49649339,49649158,49648353,49647804,49647368,49647009,49646753,49645903	Gene ID= ENSG00000161791.13 TPM= 3.86 Transcript Type= NA
chr12	49644931	49707395	49644931	49707395	-	transcript1749.chr12.nic@FMNL3	transcript1749.chr12.nic	protein_coding	49707055,49668471,49666127,49665832,49661966,49657082,49656823,49656404,49654910,49654192,49653725,49653226,49651933,49651382,49651168,49650676,49649691,49649470,49649259,49649029,49648193,49647703,49647276,49646886,49646639,49644931	49707395,49668554,49666207,49665908,49662049,49657190,49656899,49656497,49654984,49654302,49653874,49653327,49652212,49651450,49651292,49650878,49649925,49649538,49649339,49649158,49648353,49647804,49647368,49647009,49646753,49645903	Gene ID= ENSG00000161791.13 TPM= 2.9 Transcript Type= NA
chr12	49644931	49707220	49644931	49707220	-	ENST00000550488.5@FMNL3	ENST00000550488.5	protein_coding	49707055,49668471,49666127,49665832,49661966,49658442,49657082,49656823,49656404,49654910,49654192,49653725,49653226,49651933,49651382,49651168,49650676,49649691,49649470,49649259,49649029,49648193,49647703,49647276,49646886,49646639,49644931	49707220,49668554,49666207,49665908,49662049,49658594,49657190,49656899,49656497,49654984,49654302,49653874,49653327,49652212,49651450,49651292,49650878,49649925,49649538,49649339,49649158,49648353,49647801,49647368,49647009,49646753,49645903	Gene ID= ENSG00000161791.13 TPM= 1.93 Transcript Type= protein_coding
chr12	49640439	49645127	49640439	49645127	+	transcript1754.chr12.nnic@NA	transcript1754.chr12.nnic	NA	49640439	49645127	Gene ID= novel_gene_chr12_1755 TPM= 21.24 Transcript Type= NA
chr12	49741809	49764934	49741809	49764934	+	ENST00000423828.5@TMBIM6	ENST00000423828.5	protein_coding	49741809,49752464,49752973,49755635,49758227,49758383,49758683,49759221,49761704,49762873	49742280,49752549,49753081,49755755,49758275,49758480,49758762,49759321,49761779,49764934	Gene ID= ENSG00000139644.12 TPM= 29.44 Transcript Type= protein_coding
chr12	49741557	49764933	49741557	49764933	+	ENST00000267115.9@TMBIM6	ENST00000267115.9	protein_coding	49741557,49752464,49752973,49755635,49758227,49758383,49758683,49759221,49761704,49762873	49741611,49752549,49753081,49755755,49758275,49758480,49758762,49759321,49761779,49764933	Gene ID= ENSG00000139644.12 TPM= 60.33 Transcript Type= protein_coding
chr12	49791146	49797002	49791146	49797002	-	ENST00000433948.5@NCKAP5L	ENST00000433948.5	protein_coding	49794765,49793734,49793352,49792678,49791146	49797002,49793896,49793433,49792986,49792588	Gene ID= ENSG00000167566.16 TPM= 8.21 Transcript Type= protein_coding
chr12	49791146	49828425	49791146	49828425	-	ENST00000335999.6@NCKAP5L	ENST00000335999.6	protein_coding	49828322,49805980,49803922,49803097,49802958,49801848,49798350,49794765,49793734,49793352,49792678,49792446,49791146	49828425,49806041,49804080,49803165,49802996,49801967,49798463,49797394,49793896,49793433,49792986,49792588,49792051	Gene ID= ENSG00000167566.16 TPM= 11.1 Transcript Type= protein_coding
chr12	49836039	49843129	49836039	49843129	-	ENST00000333924.5@BCDIN3D	ENST00000333924.5	protein_coding	49842854,49836039	49843129,49839015	Gene ID= ENSG00000186666.5 TPM= 3.86 Transcript Type= protein_coding
chr12	50084972	50100712	50084972	50100712	+	ENST00000394963.8@SMARCD1	ENST00000394963.8	protein_coding	50084972,50086161,50086621,50086756,50087363,50088521,50089884,50090241,50090493,50094437,50096850,50098714,50098947	50085546,50086348,50086663,50086878,50087485,50088637,50089985,50090402,50090590,50094572,50096972,50098815,50100712	Gene ID= ENSG00000066117.14 TPM= 6.76 Transcript Type= protein_coding
chr12	50085200	50100642	50085200	50100642	+	ENST00000381513.8@SMARCD1	ENST00000381513.8	protein_coding	50085200,50086161,50086621,50086756,50087363,50088521,50089884,50090241,50090493,50094437,50098714,50098947	50085546,50086348,50086663,50086878,50087485,50088637,50089985,50090402,50090590,50094572,50098815,50100642	Gene ID= ENSG00000066117.14 TPM= 2.9 Transcript Type= protein_coding
chr12	50103819	50111319	50103819	50111319	+	ENST00000301149.7@GPD1	ENST00000301149.7	protein_coding	50103819,50104574,50105548,50106288,50106805,50107567,50108024,50109423	50104091,50104751,50105688,50106426,50106917,50107800,50108130,50111319	Gene ID= ENSG00000167588.12 TPM= 292.49 Transcript Type= protein_coding
chr12	50110190	50111309	50110190	50111309	+	transcript1793.chr12.nnic@GPD1	transcript1793.chr12.nnic	protein_coding	50110190,50110229	50110199,50111309	Gene ID= ENSG00000167588.12 TPM= 33.79 Transcript Type= NA
chr12	50112082	50120451	50112082	50120451	+	ENST00000317943.6@COX14	ENST00000317943.6	protein_coding	50112082,50112832,50120036	50112301,50112903,50120451	Gene ID= ENSG00000178449.8 TPM= 4.83 Transcript Type= protein_coding
chr12	50112204	50120457	50112204	50120457	+	ENST00000550654.1@COX14	ENST00000550654.1	protein_coding	50112204,50118493,50120036	50112301,50118552,50120457	Gene ID= ENSG00000178449.8 TPM= 16.41 Transcript Type= protein_coding
chr12	50129798	50167422	50129798	50167422	-	ENST00000317551.10@CERS5	ENST00000317551.10	protein_coding	50167101,50143952,50143074,50142053,50138567,50137728,50135941,50135732,50134546,50129798	50167422,50144057,50143204,50142110,50138617,50137820,50136069,50135838,50134702,50130694	Gene ID= ENSG00000139624.12 TPM= 3.86 Transcript Type= protein_coding
chr12	50175790	50222705	50175790	50222705	-	ENST00000552783.5@LIMA1	ENST00000552783.5	protein_coding	50222021,50205984,50204552,50200777,50195830,50192452,50181904,50175790	50222705,50206068,50204700,50200884,50195887,50192564,50182037,50178069	Gene ID= ENSG00000050405.13 TPM= 1.45 Transcript Type= protein_coding
chr12	50175788	50283546	50175788	50283546	-	ENST00000341247.8@LIMA1	ENST00000341247.8	protein_coding	50283420,50248633,50231665,50222021,50205984,50204552,50200777,50195830,50192452,50181904,50175788	50283546,50248774,50231710,50222485,50206068,50204700,50200884,50195887,50192561,50182037,50178069	Gene ID= ENSG00000050405.13 TPM= 3.38 Transcript Type= protein_coding
chr12	50401120	50479915	50401120	50479915	+	transcript1814.chr12.nic@LARP4	transcript1814.chr12.nic	protein_coding	50401120,50427762,50428935,50430495,50435488,50437735,50440439,50441590,50453460,50454314,50462582,50466959,50473415,50473999,50475526	50401221,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50453672,50454417,50462630,50467120,50473536,50474167,50479915	Gene ID= ENSG00000161813.21 TPM= 2.9 Transcript Type= NA
chr12	50400838	50456130	50400838	50456130	+	transcript1819.chr12.nnic@LARP4	transcript1819.chr12.nnic	protein_coding	50400838,50427762,50428935,50430495,50435488,50437735,50440439,50441590,50441598,50454314,50455507	50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441595,50441643,50454417,50456130	Gene ID= ENSG00000161813.21 TPM= 1.93 Transcript Type= NA
chr12	50400889	50445889	50400889	50445889	+	transcript1826.chr12.nnic@LARP4	transcript1826.chr12.nnic	protein_coding	50400889,50427762,50428935,50430495,50435488,50437735,50440439,50441590,50445275	50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50445889	Gene ID= ENSG00000161813.21 TPM= 1.93 Transcript Type= NA
chr12	50400838	50445889	50400838	50445889	+	transcript1827.chr12.nnic@LARP4	transcript1827.chr12.nnic	protein_coding	50400838,50427762,50428935,50430495,50435488,50437735,50440439,50441590,50445645	50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50445889	Gene ID= ENSG00000161813.21 TPM= 2.9 Transcript Type= NA
chr12	50400809	50479996	50400809	50479996	+	ENST00000293618.12@LARP4	ENST00000293618.12	protein_coding	50400809,50427762,50428935,50430495,50435488,50437735,50440439,50441590,50453460,50454314,50462582,50466959,50473415,50473999,50475526	50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50453672,50454417,50462630,50467120,50473536,50474167,50479996	Gene ID= ENSG00000161813.21 TPM= 20.27 Transcript Type= protein_coding
chr12	50400932	50435599	50400932	50435599	+	ENST00000551886.5@LARP4	ENST00000551886.5	protein_coding	50400932,50427762,50428935,50430498,50435488	50401028,50427909,50429090,50430570,50435599	Gene ID= ENSG00000161813.21 TPM= 1.93 Transcript Type= protein_coding
chr12	50400929	50476463	50400929	50476463	+	ENST00000518444.5@LARP4	ENST00000518444.5	protein_coding	50400929,50427765,50428935,50430495,50435488,50437735,50440439,50441590,50453460,50454314,50461135,50462582,50466959,50473415,50473999,50475526	50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50453672,50454417,50461347,50462630,50467120,50473536,50474167,50476463	Gene ID= ENSG00000161813.21 TPM= 1.93 Transcript Type= protein_coding
chr12	50764292	50821122	50764292	50821122	+	ENST00000262053.7@ATF1	ENST00000262053.7	protein_coding	50764292,50780140,50795909,50809456,50814010,50814280,50819635	50764307,50780238,50796009,50809589,50814192,50814439,50821122	Gene ID= ENSG00000123268.8 TPM= 9.65 Transcript Type= protein_coding
chr12	50924983	50932507	50924983	50932507	+	ENST00000547104.1@METTL7A	ENST00000547104.1	protein_coding	50924983,50929914,50931615	50925536,50930291,50932507	Gene ID= ENSG00000185432.11 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr12	50979786	51009254	50979786	51009254	-	transcript1857.chr12.nic@SLC11A2	transcript1857.chr12.nic	protein_coding	51009117,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50979786	51009254,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803	Gene ID= ENSG00000110911.14 TPM= 4.83 Transcript Type= NA
chr12	50985992	51026384	50985992	51026384	-	ENST00000262052.9@SLC11A2	ENST00000262052.9	protein_coding	51026310,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50985992	51026384,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435	Gene ID= ENSG00000110911.14 TPM= 8.04 Transcript Type= protein_coding
chr12	50985992	51009273	50985992	51009273	-	transcript1869.chr12.nnic@SLC11A2	transcript1869.chr12.nnic	protein_coding	51009117,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50985992	51009273,51008544,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435	Gene ID= ENSG00000110911.14 TPM= 7.08 Transcript Type= NA
chr12	50985992	51009254	50985992	51009254	-	transcript1873.chr12.nic@SLC11A2	transcript1873.chr12.nic	protein_coding	51009117,51008476,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50985992	51009254,51008624,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435	Gene ID= ENSG00000110911.14 TPM= 3.21 Transcript Type= NA
chr12	50979820	51026368	50979820	51026368	-	ENST00000546636.5@SLC11A2	ENST00000546636.5	protein_coding	51026315,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50981639,50979820	51026368,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803,50980058	Gene ID= ENSG00000110911.14 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr12	50981009	51026338	50981009	51026338	-	ENST00000547198.5@SLC11A2	ENST00000547198.5	protein_coding	51026315,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50981009	51026338,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803	Gene ID= ENSG00000110911.14 TPM= 1.93 Transcript Type= protein_coding
chr12	51048318	51060421	51048318	51060421	+	ENST00000262055.8@LETMD1	ENST00000262055.8	protein_coding	51048318,51049034,51052092,51053778,51055835,51056144,51056350,51058032,51059361	51048478,51049185,51052207,51053860,51056021,51056245,51056502,51058128,51060421	Gene ID= ENSG00000050426.15 TPM= 10.95 Transcript Type= protein_coding
chr12	51048327	51060421	51048327	51060421	+	transcript1879.chr12.nnic@LETMD1	transcript1879.chr12.nnic	protein_coding	51048327,51049034,51052092,51053812,51055835,51056144,51056350,51058032,51059361	51048478,51049185,51052207,51053860,51056021,51056245,51056502,51058128,51060421	Gene ID= ENSG00000050426.15 TPM= 2.26 Transcript Type= NA
chr12	51048327	51060421	51048327	51060421	+	transcript1882.chr12.nic@LETMD1	transcript1882.chr12.nic	protein_coding	51048327,51049034,51053812,51055835,51056144,51056350,51058032,51059361	51048478,51049185,51053860,51056021,51056245,51056502,51058128,51060421	Gene ID= ENSG00000050426.15 TPM= 4.19 Transcript Type= NA
chr12	51048327	51060421	51048327	51060421	+	transcript1883.chr12.nic@LETMD1	transcript1883.chr12.nic	protein_coding	51048327,51052092,51053778,51055835,51056144,51056350,51058032,51059361	51049185,51052207,51053860,51056021,51056245,51056502,51058128,51060421	Gene ID= ENSG00000050426.15 TPM= 3.03 Transcript Type= NA
chr12	51048327	51060421	51048327	51060421	+	transcript1886.chr12.nic@LETMD1	transcript1886.chr12.nic	protein_coding	51048327,51049034,51055987,51056144,51056350,51058032,51059361	51048478,51049185,51056021,51056245,51056502,51058128,51060421	Gene ID= ENSG00000050426.15 TPM= 2.26 Transcript Type= NA
chr12	51048327	51060421	51048327	51060421	+	transcript1887.chr12.nic@LETMD1	transcript1887.chr12.nic	protein_coding	51048327,51053778,51055835,51056144,51056350,51058032,51059361	51049185,51053860,51056021,51056245,51056502,51058128,51060421	Gene ID= ENSG00000050426.15 TPM= 4.96 Transcript Type= NA
chr12	51048327	51060421	51048327	51060421	+	transcript1899.chr12.nic@LETMD1	transcript1899.chr12.nic	protein_coding	51048327,51049034,51056350,51059361	51048478,51049185,51056502,51060421	Gene ID= ENSG00000050426.15 TPM= 2.12 Transcript Type= NA
chr12	51048346	51060401	51048346	51060401	+	ENST00000552739.5@LETMD1	ENST00000552739.5	protein_coding	51048346,51055835,51056144,51056350,51058032,51059361	51048478,51056021,51056245,51056502,51058128,51060401	Gene ID= ENSG00000050426.15 TPM= 1.93 Transcript Type= protein_coding
chr12	51048301	51060409	51048301	51060409	+	ENST00000547318.5@LETMD1	ENST00000547318.5	protein_coding	51048301,51049034,51053778,51055835,51056144,51056350,51058032,51059361	51048478,51049185,51053860,51056021,51056245,51056502,51058128,51060409	Gene ID= ENSG00000050426.15 TPM= 2.07 Transcript Type= nonsense_mediated_decay
chr12	51061208	51083596	51061208	51083596	-	transcript1892.chr12.nnic@CSRNP2	transcript1892.chr12.nnic	protein_coding	51083339,51076411,51073823,51067673,51065065,51061208	51083596,51076647,51074082,51067969,51065107,51064669	Gene ID= ENSG00000110925.6 TPM= 18.34 Transcript Type= NA
chr12	51186936	51217806	51186936	51217806	-	transcript1906.chr12.nic@POU6F1	transcript1906.chr12.nic	protein_coding	51217642,51206789,51204173,51199747,51198550,51197770,51195970,51192330,51191596,51186936	51217806,51206883,51204368,51199868,51198686,51198023,51196173,51192471,51191764,51190592	Gene ID= ENSG00000184271.16 TPM= 12.55 Transcript Type= NA
chr12	51201859	51218104	51201859	51218104	-	transcript1911.chr12.nic@POU6F1	transcript1911.chr12.nic	protein_coding	51217642,51206789,51201859	51218104,51206883,51204368	Gene ID= ENSG00000184271.16 TPM= 2.9 Transcript Type= NA
chr12	51238292	51243933	51238292	51243933	+	ENST00000412716.7@DAZAP2	ENST00000412716.7	protein_coding	51238292,51240343,51240871,51242330	51238920,51240461,51241116,51243933	Gene ID= ENSG00000183283.15 TPM= 143.83 Transcript Type= protein_coding
chr12	51238903	51243785	51238903	51243785	+	ENST00000436900.2@DAZAP2	ENST00000436900.2	protein_coding	51238903,51240343,51240899,51242330	51238920,51240461,51241116,51243785	Gene ID= ENSG00000183283.15 TPM= 9.65 Transcript Type= nonsense_mediated_decay
chr12	51244558	51270890	51244558	51270890	-	ENST00000603798.5@SMAGP	ENST00000603798.5	protein_coding	51270256,51269245,51246751,51244558	51270890,51269316,51246831,51246119	Gene ID= ENSG00000170545.16 TPM= 1.93 Transcript Type= protein_coding
chr12	51813940	51814926	51813940	51814926	-	ENST00000642069.1@AC068987.5	ENST00000642069.1	protein_coding	51813940	51814926	Gene ID= ENSG00000284730.1 TPM= 1.93 Transcript Type= protein_coding
chr12	51912332	51923359	51912332	51923359	+	ENST00000550683.5@ACVRL1	ENST00000550683.5	protein_coding	51912332,51913099,51913559,51913974,51914439,51915225,51916036,51918985,51920759	51912535,51913350,51913770,51914073,51914585,51915500,51916233,51919115,51923359	Gene ID= ENSG00000139567.12 TPM= 20.27 Transcript Type= protein_coding
chr12	52006940	52015864	52006940	52015864	+	ENST00000293662.8@GRASP	ENST00000293662.8	protein_coding	52006940,52009190,52010881,52011039,52013687,52013877,52014135,52014694	52007265,52009239,52010935,52011141,52013780,52013943,52014201,52015864	Gene ID= ENSG00000161835.10 TPM= 19.31 Transcript Type= protein_coding
chr12	52037138	52059503	52037138	52059503	+	transcript1932.chr12.nic@NR4A1	transcript1932.chr12.nic	protein_coding	52037138,52041810,52054327,52056030,52056494,52057057,52057352,52058688	52037443,52041929,52055204,52056159,52056645,52057259,52057530,52059503	Gene ID= ENSG00000123358.19 TPM= 25.28 Transcript Type= NA
chr12	52037715	52059501	52037715	52059501	+	ENST00000545748.5@NR4A1	ENST00000545748.5	protein_coding	52037715,52041810,52054327,52056030,52056494,52057057,52057352,52058688	52038749,52041929,52055204,52056159,52056645,52057259,52057530,52059501	Gene ID= ENSG00000123358.19 TPM= 19.97 Transcript Type= protein_coding
chr12	52051402	52059506	52051402	52059506	+	ENST00000243050.5@NR4A1	ENST00000243050.5	protein_coding	52051402,52052496,52054327,52056030,52056494,52057057,52057352,52058688	52051568,52052645,52055204,52056159,52056645,52057259,52057530,52059506	Gene ID= ENSG00000123358.19 TPM= 17.17 Transcript Type= protein_coding
chr12	52043625	52059503	52043625	52059503	+	transcript1939.chr12.nic@NR4A1	transcript1939.chr12.nic	protein_coding	52043625,52054327,52056030,52056494,52057057,52057352,52058688	52043911,52055204,52056159,52056645,52057259,52057530,52059503	Gene ID= ENSG00000123358.19 TPM= 115.06 Transcript Type= NA
chr12	52051402	52059506	52051402	52059506	+	ENST00000394825.5@NR4A1	ENST00000394825.5	protein_coding	52051402,52054327,52056030,52056494,52057057,52057352,52058688	52051568,52055204,52056159,52056645,52057259,52057530,52059506	Gene ID= ENSG00000123358.19 TPM= 30.69 Transcript Type= protein_coding
chr12	52069971	52077494	52069971	52077494	+	ENST00000336854.8@ATG101	ENST00000336854.8	protein_coding	52069971,52070354,52073575,52076786	52070242,52070483,52073902,52077494	Gene ID= ENSG00000123395.14 TPM= 72.4 Transcript Type= protein_coding
chr12	52087414	52107944	52087414	52107944	+	transcript1946.chr12.nnic@OR7E47P	transcript1946.chr12.nnic	transcribed_unprocessed_pseudogene	52087414,52107379	52087684,52107944	Gene ID= ENSG00000257542.4 TPM= 1.93 Transcript Type= NA
chr12	52948964	52952901	52948964	52952901	+	ENST00000388835.3@KRT18	ENST00000388835.3	protein_coding	52948964,52950328,52950750,52951481,52951731,52952119,52952722	52949590,52950410,52950906,52951645,52951856,52952342,52952901	Gene ID= ENSG00000111057.10 TPM= 1.93 Transcript Type= protein_coding
chr12	53006158	53042209	53006158	53042209	+	ENST00000262056.13@EIF4B	ENST00000262056.13	protein_coding	53006158,53016473,53018798,53019910,53021806,53022493,53027782,53028015,53033806,53034612,53037409,53038356,53039238,53039630,53040143	53006496,53016610,53019006,53020026,53021860,53022627,53027919,53028188,53034034,53034709,53037622,53038411,53039343,53039702,53042209	Gene ID= ENSG00000063046.17 TPM= 555.86 Transcript Type= protein_coding
chr12	53006456	53040280	53006456	53040280	+	ENST00000420463.7@EIF4B	ENST00000420463.7	protein_coding	53006456,53016473,53018798,53019910,53021806,53022493,53027782,53028015,53033806,53034612,53037409,53038356,53039238,53039630,53040143	53006496,53016610,53019006,53020026,53021860,53022627,53027919,53028188,53034034,53034724,53037622,53038411,53039343,53039702,53040280	Gene ID= ENSG00000063046.17 TPM= 42.79 Transcript Type= protein_coding
chr12	53064316	53079420	53064316	53079420	-	ENST00000301463.8@SPRYD3	ENST00000301463.8	protein_coding	53079311,53077115,53075736,53075095,53074649,53073286,53068155,53067648,53066573,53066314,53064316	53079420,53077261,53075811,53075219,53074784,53073471,53068304,53067705,53066692,53066486,53065966	Gene ID= ENSG00000167778.8 TPM= 14.48 Transcript Type= protein_coding
chr12	53097445	53102340	53097445	53102340	+	ENST00000301464.3@IGFBP6	ENST00000301464.3	protein_coding	53097445,53100712,53101041,53102045	53098051,53100857,53101160,53102340	Gene ID= ENSG00000167779.7 TPM= 25.1 Transcript Type= protein_coding
chr12	53180704	53190797	53180704	53190797	+	transcript1998.chr12.nnic@ZNF740	transcript1998.chr12.nnic	protein_coding	53180704,53181677,53184891,53185387,53185954,53186391,53190718	53180837,53181992,53185040,53185476,53186077,53187946,53190797	Gene ID= ENSG00000139651.10 TPM= 1.93 Transcript Type= NA
chr12	53191318	53207307	53191318	53207307	-	ENST00000267082.9@ITGB7	ENST00000267082.9	protein_coding	53207202,53201072,53200243,53197750,53197493,53196579,53196041,53195626,53195374,53194198,53193708,53193140,53192691,53192330,53191859,53191318	53207307,53201194,53200446,53197951,53197663,53196820,53196199,53195721,53195463,53194344,53193901,53193363,53192910,53192538,53192019,53191636	Gene ID= ENSG00000139626.15 TPM= 1.93 Transcript Type= protein_coding
chr12	53210570	53214841	53210570	53214841	-	transcript2005.chr12.nic@RARG	transcript2005.chr12.nic	protein_coding	53214446,53214059,53213496,53213085,53210570	53214841,53214235,53213700,53213243,53211863	Gene ID= ENSG00000172819.16 TPM= 1.93 Transcript Type= NA
chr12	53252096	53254404	53252096	53254404	+	ENST00000329548.4@MFSD5	ENST00000329548.4	protein_coding	53252096,53252818	53252268,53254404	Gene ID= ENSG00000182544.8 TPM= 25.1 Transcript Type= protein_coding
chr12	53295291	53299450	53295291	53299450	+	ENST00000551018.5@PFDN5	ENST00000551018.5	protein_coding	53295291,53295839,53296244,53297850,53298045,53299269	53295639,53295941,53296275,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 184.37 Transcript Type= protein_coding
chr12	53295500	53299447	53295500	53299447	+	transcript2027.chr12.nic@PFDN5	transcript2027.chr12.nic	protein_coding	53295500,53295839,53297850,53298045,53299269	53295639,53296275,53297924,53298150,53299447	Gene ID= ENSG00000123349.13 TPM= 20.27 Transcript Type= NA
chr12	53295542	53299450	53295542	53299450	+	ENST00000547130.5@PFDN5	ENST00000547130.5	protein_coding	53295542,53296454,53297850,53298045,53299269	53295639,53296551,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 3.62 Transcript Type= nonsense_mediated_decay
chr12	53295525	53299450	53295525	53299450	+	ENST00000351500.7@PFDN5	ENST00000351500.7	protein_coding	53295525,53297850,53298045,53299269	53295639,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 8.45 Transcript Type= protein_coding
chr12	53295536	53299450	53295536	53299450	+	ENST00000550846.5@PFDN5	ENST00000550846.5	protein_coding	53295536,53298045,53299269	53295639,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 5.55 Transcript Type= protein_coding
chr12	53295542	53299450	53295542	53299450	+	ENST00000243040.10@PFDN5	ENST00000243040.10	protein_coding	53295542,53295839,53297850,53298045,53299269	53295639,53295941,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 5.55 Transcript Type= nonsense_mediated_decay
chr12	53299686	53307158	53299686	53307158	+	ENST00000267103.9@C12orf10	ENST00000267103.9	protein_coding	53299686,53300150,53303034,53305908,53306198,53306680,53306966	53299953,53300262,53303193,53306060,53306320,53306861,53307158	Gene ID= ENSG00000139637.13 TPM= 56.95 Transcript Type= protein_coding
chr12	53299718	53307171	53299718	53307171	+	ENST00000548845.5@C12orf10	ENST00000548845.5	protein_coding	53299718,53303034,53305908,53306198,53306680,53306966	53300262,53303193,53306060,53306320,53306861,53307171	Gene ID= ENSG00000139637.13 TPM= 10.62 Transcript Type= retained_intron
chr12	53307456	53321631	53307456	53321631	-	ENST00000209873.8@AAAS	ENST00000209873.8	protein_coding	53321343,53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307456	53321631,53320692,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 19.62 Transcript Type= protein_coding
chr12	53307460	53321611	53307460	53321611	-	transcript2012.chr12.nic@AAAS	transcript2012.chr12.nic	protein_coding	53321471,53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307460	53321611,53320692,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 4.99 Transcript Type= NA
chr12	53307460	53321333	53307460	53321333	-	transcript2013.chr12.nic@AAAS	transcript2013.chr12.nic	protein_coding	53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307460	53321333,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 5.96 Transcript Type= NA
chr12	53307459	53321596	53307459	53321596	-	ENST00000394384.7@AAAS	ENST00000394384.7	protein_coding	53321343,53320565,53315727,53315335,53315094,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307459	53321596,53320692,53315782,53315426,53315140,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 3.21 Transcript Type= protein_coding
chr12	53441748	53446645	53441748	53446645	+	ENST00000546581.5@PRR13	ENST00000546581.5	protein_coding	53441748,53442695,53443679,53446015	53441792,53442733,53443773,53446645	Gene ID= ENSG00000205352.10 TPM= 1.28 Transcript Type= protein_coding
chr12	53441762	53446638	53441762	53446638	+	ENST00000379786.8@PRR13	ENST00000379786.8	protein_coding	53441762,53442695,53443541,53446015	53441792,53442733,53443773,53446638	Gene ID= ENSG00000205352.10 TPM= 1.28 Transcript Type= protein_coding
chr12	53441740	53446638	53441740	53446638	+	transcript2044.chr12.nnic@AC023509.1	transcript2044.chr12.nnic	processed_transcript	53441740,53442695,53446015	53441792,53442733,53446638	Gene ID= ENSG00000257379.1 TPM= 2.25 Transcript Type= NA
chr12	53452129	53479832	53452129	53479832	+	ENST00000359462.9@PCBP2	ENST00000359462.9	protein_coding	53452129,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53464760,53465932,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53464852,53465973,53467293,53467843,53468832,53471807,53479832	Gene ID= ENSG00000197111.15 TPM= 20.44 Transcript Type= protein_coding
chr12	53452274	53479821	53452274	53479821	+	transcript2052.chr12.nic@PCBP2	transcript2052.chr12.nic	protein_coding	53452274,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53464760,53465932,53467221,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53464852,53465973,53467293,53468832,53471807,53479821	Gene ID= ENSG00000197111.15 TPM= 5.31 Transcript Type= NA
chr12	53452102	53481161	53452102	53481161	+	ENST00000447282.5@PCBP2	ENST00000447282.5	protein_coding	53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53465932,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53467843,53468832,53471807,53481161	Gene ID= ENSG00000197111.15 TPM= 3.86 Transcript Type= protein_coding
chr12	53452102	53479826	53452102	53479826	+	ENST00000359282.9@PCBP2	ENST00000359282.9	protein_coding	53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53465932,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53467843,53468832,53471807,53479826	Gene ID= ENSG00000197111.15 TPM= 14.64 Transcript Type= protein_coding
chr12	53452102	53481161	53452102	53481161	+	ENST00000437231.5@PCBP2	ENST00000437231.5	protein_coding	53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53465932,53467221,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53468832,53471807,53481161	Gene ID= ENSG00000197111.15 TPM= 4.83 Transcript Type= protein_coding
chr12	53452208	53479821	53452208	53479821	+	transcript2065.chr12.nic@PCBP2	transcript2065.chr12.nic	protein_coding	53452208,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53467293,53467843,53468832,53471807,53479821	Gene ID= ENSG00000197111.15 TPM= 9.17 Transcript Type= NA
chr12	53452368	53479614	53452368	53479614	+	ENST00000552296.6@PCBP2	ENST00000552296.6	protein_coding	53452368,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53464760,53465932,53467221,53467805,53468780,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53464852,53465973,53467293,53467843,53468832,53471807,53479614	Gene ID= ENSG00000197111.15 TPM= 4.83 Transcript Type= protein_coding
chr12	53454734	53479824	53454734	53479824	+	ENST00000552819.5@PCBP2	ENST00000552819.5	protein_coding	53454734,53455347,53455461,53455885,53459272,53461015,53462481,53465932,53467221,53468777,53471638,53479406	53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53468832,53471807,53479824	Gene ID= ENSG00000197111.15 TPM= 3.06 Transcript Type= protein_coding
chr12	53479669	53499615	53479669	53499615	-	ENST00000267079.6@MAP3K12	ENST00000267079.6	protein_coding	53499427,53487255,53486947,53486439,53486056,53485317,53485056,53484257,53483911,53483607,53483349,53482565,53482299,53481941,53479669	53499615,53487428,53487155,53486622,53486247,53485475,53485214,53484365,53484020,53483723,53483486,53483189,53482369,53482211,53481280	Gene ID= ENSG00000139625.12 TPM= 20.27 Transcript Type= protein_coding
chr12	53501286	53506431	53501286	53506431	+	transcript2071.chr12.nic@TARBP2	transcript2071.chr12.nic	protein_coding	53501286,53502015,53503027,53503713,53504397,53504612,53505135,53505649,53505991	53501461,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 2.9 Transcript Type= NA
chr12	53500926	53506431	53500926	53506431	+	ENST00000266987.6@TARBP2	ENST00000266987.6	protein_coding	53500926,53502015,53503027,53503713,53504397,53504698,53505135,53505649,53505991	53501461,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 8.69 Transcript Type= protein_coding
chr12	53500921	53506431	53500921	53506431	+	ENST00000550147.5@TARBP2	ENST00000550147.5	protein_coding	53500921,53502015,53503027,53503730,53504397,53504698,53505135,53505649,53505991	53501461,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr12	53542887	53625996	53542887	53625996	-	ENST00000548118.6@ATF7	ENST00000548118.6	protein_coding	53625951,53600953,53552541,53542887	53625996,53601021,53552637,53543448	Gene ID= ENSG00000170653.18 TPM= 3.38 Transcript Type= protein_coding
chr12	53542887	53626410	53542887	53626410	-	ENST00000591397.1@ATF7	ENST00000591397.1	protein_coding	53626279,53600953,53552541,53542887	53626410,53601021,53552637,53543448	Gene ID= ENSG00000170653.18 TPM= 11.1 Transcript Type= protein_coding
chr12	53512059	53626407	53512059	53626407	-	ENST00000420353.6@ATF7	ENST00000420353.6	protein_coding	53626279,53600953,53552541,53543330,53537415,53534502,53533160,53532510,53531744,53524564,53523276,53512059	53626407,53601021,53552637,53543448,53537552,53534659,53533259,53532623,53531896,53524761,53523384,53517354	Gene ID= ENSG00000170653.18 TPM= 13.51 Transcript Type= protein_coding
chr12	53665171	53677553	53665171	53677553	-	transcript2088.chr12.nnic@ATP5G2	transcript2088.chr12.nnic	protein_coding	53677393,53676053,53672576,53669871,53669148,53665171	53677553,53676659,53672645,53669948,53669341,53665428	Gene ID= ENSG00000135390.17 TPM= 359.1 Transcript Type= NA
chr12	53711119	53727473	53711119	53727473	-	transcript2092.chr12.nic@CALCOCO1	transcript2092.chr12.nic	protein_coding	53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53713100,53712775,53711119	53727473,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713206,53712846,53712121	Gene ID= ENSG00000012822.15 TPM= 14.43 Transcript Type= NA
chr12	53711119	53727452	53711119	53727452	-	transcript2094.chr12.nic@CALCOCO1	transcript2094.chr12.nic	protein_coding	53727404,53725690,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53713100,53711119	53727452,53725759,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713206,53712121	Gene ID= ENSG00000012822.15 TPM= 21.96 Transcript Type= NA
chr12	53708517	53727745	53708517	53727745	-	ENST00000262059.8@CALCOCO1	ENST00000262059.8	protein_coding	53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53713100,53708517	53727745,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713203,53712121	Gene ID= ENSG00000012822.15 TPM= 85.86 Transcript Type= protein_coding
chr12	53711159	53727473	53711159	53727473	-	transcript2105.chr12.nic@CALCOCO1	transcript2105.chr12.nic	protein_coding	53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53713701,53711159	53727473,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713206	Gene ID= ENSG00000012822.15 TPM= 6.47 Transcript Type= NA
chr12	53711119	53714629	53711119	53714629	-	ENST00000546443.5@CALCOCO1	ENST00000546443.5	protein_coding	53714598,53714133,53713701,53713100,53712775,53711119	53714629,53714241,53713900,53713206,53712846,53712121	Gene ID= ENSG00000012822.15 TPM= 14.48 Transcript Type= protein_coding
chr12	53711159	53727428	53711159	53727428	-	ENST00000548263.5@CALCOCO1	ENST00000548263.5	protein_coding	53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53711159	53727428,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713206	Gene ID= ENSG00000012822.15 TPM= 2.85 Transcript Type= protein_coding
chr12	53973128	53976419	53973128	53976419	+	ENST00000243082.4@HOXC11	ENST00000243082.4	protein_coding	53973128,53975181	53973927,53976419	Gene ID= ENSG00000123388.4 TPM= 1.93 Transcript Type= protein_coding
chr12	53985145	53990279	53985145	53990279	+	transcript2116.chr12.nnic@HOXC10	transcript2116.chr12.nnic	protein_coding	53985145,53985485,53989169	53985347,53986010,53990279	Gene ID= ENSG00000180818.4 TPM= 3.86 Transcript Type= NA
chr12	53985186	53990279	53985186	53990279	+	ENST00000303460.4@HOXC10	ENST00000303460.4	protein_coding	53985186,53989169	53986010,53990279	Gene ID= ENSG00000180818.4 TPM= 104.25 Transcript Type= protein_coding
chr12	54000119	54003337	54000119	54003337	+	ENST00000303450.4@HOXC9	ENST00000303450.4	protein_coding	54000119,54002430	54000726,54003337	Gene ID= ENSG00000180806.4 TPM= 2.9 Transcript Type= protein_coding
chr12	53999022	54000010	53999022	54000010	-	ENST00000505700.1@HOXC-AS1	ENST00000505700.1	antisense_RNA	53999709,53999022	54000010,53999267	Gene ID= ENSG00000250451.5 TPM= 5.79 Transcript Type= antisense_RNA
chr12	54126098	54132843	54126098	54132843	+	ENST00000508564.1@LINC02381	ENST00000508564.1	lincRNA	54126098,54131990	54126612,54132843	Gene ID= ENSG00000250742.2 TPM= 1.93 Transcript Type= lincRNA
chr12	54181453	54188989	54181453	54188989	-	transcript2132.chr12.nic@SMUG1	transcript2132.chr12.nic	protein_coding	54188951,54187819,54183656,54182504,54181453	54188989,54187905,54183959,54182623,54181647	Gene ID= ENSG00000123415.15 TPM= 3.86 Transcript Type= NA
chr12	54181275	54188994	54181275	54188994	-	ENST00000508394.6@SMUG1	ENST00000508394.6	protein_coding	54188951,54183656,54181275	54188994,54183959,54182623	Gene ID= ENSG00000123415.15 TPM= 3.86 Transcript Type= protein_coding
chr12	54181468	54188974	54181468	54188974	-	ENST00000337581.7@SMUG1	ENST00000337581.7	protein_coding	54188951,54187819,54183656,54181468	54188974,54187905,54183959,54182623	Gene ID= ENSG00000123415.15 TPM= 9.65 Transcript Type= protein_coding
chr12	54181471	54188976	54181471	54188976	-	ENST00000243112.9@SMUG1	ENST00000243112.9	protein_coding	54188951,54183656,54182504,54181471	54188976,54183959,54182623,54181647	Gene ID= ENSG00000123415.15 TPM= 2.9 Transcript Type= protein_coding
chr12	54182883	54185486	54182883	54185486	+	transcript2144.chr12.nnic@NA	transcript2144.chr12.nnic	NA	54182883	54185486	Gene ID= novel_gene_chr12_2145 TPM= 2.9 Transcript Type= NA
chr12	54230940	54280102	54230940	54280102	-	ENST00000209875.8@CBX5	ENST00000209875.8	protein_coding	54280008,54257514,54252041,54246115,54230940	54280102,54257692,54252227,54246215,54241905	Gene ID= ENSG00000094916.15 TPM= 34.75 Transcript Type= protein_coding
chr12	54280193	54287087	54280193	54287087	+	ENST00000546500.5@HNRNPA1	ENST00000546500.5	protein_coding	54280193,54281386,54281795,54282090,54282394,54282573,54282800,54283812,54284258,54284549	54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283967,54284317,54287087	Gene ID= ENSG00000135486.17 TPM= 341.56 Transcript Type= protein_coding
chr12	54280748	54287088	54280748	54287088	+	ENST00000547566.5@HNRNPA1	ENST00000547566.5	protein_coding	54280748,54281386,54281795,54282090,54282394,54282573,54282800,54283812,54284258,54286662,54286953	54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283967,54284317,54286732,54287088	Gene ID= ENSG00000135486.17 TPM= 66.61 Transcript Type= nonsense_mediated_decay
chr12	54280755	54285214	54280755	54285214	+	ENST00000340913.10@HNRNPA1	ENST00000340913.10	protein_coding	54280755,54281386,54281795,54282090,54282394,54282573,54282800,54283079,54283812,54284258,54284549	54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283234,54283967,54284317,54285214	Gene ID= ENSG00000135486.17 TPM= 147.53 Transcript Type= protein_coding
chr12	54280775	54284881	54280775	54284881	+	ENST00000330752.12@HNRNPA1	ENST00000330752.12	protein_coding	54280775,54281386,54281795,54282090,54282394,54282573,54282843,54283812,54284258,54284549	54280822,54281502,54281941,54282300,54282486,54282669,54282874,54283967,54284317,54284881	Gene ID= ENSG00000135486.17 TPM= 4.66 Transcript Type= protein_coding
chr12	54325127	54351849	54325127	54351849	+	ENST00000262061.6@COPZ1	ENST00000262061.6	protein_coding	54325127,54340547,54342206,54343225,54345460,54347767,54348000,54349620,54350476	54325181,54340615,54342287,54343316,54345515,54347844,54348051,54349658,54351849	Gene ID= ENSG00000111481.9 TPM= 94.6 Transcript Type= protein_coding
chr12	54395261	54419460	54395261	54419460	-	ENST00000293379.8@ITGA5	ENST00000293379.8	protein_coding	54418981,54411834,54409485,54409232,54408893,54408756,54408110,54407832,54407649,54405870,54405664,54405166,54404703,54404430,54404145,54403911,54403625,54403187,54402983,54402180,54402001,54401776,54401585,54401373,54400846,54399864,54399645,54398597,54397365,54395261	54419460,54411964,54409597,54409352,54408954,54408801,54408235,54407876,54407692,54405926,54405716,54405374,54404894,54404475,54404246,54403966,54403779,54403324,54403050,54402330,54402093,54401855,54401665,54401478,54400995,54399947,54399758,54398698,54397487,54396376	Gene ID= ENSG00000161638.10 TPM= 107.15 Transcript Type= protein_coding
chr12	54579248	54588659	54579248	54588659	-	ENST00000257905.12@PPP1R1A	ENST00000257905.12	protein_coding	54588405,54584260,54583211,54582732,54581976,54580944,54579248	54588659,54584320,54583248,54582795,54582131,54581050,54580392	Gene ID= ENSG00000135447.16 TPM= 149.62 Transcript Type= protein_coding
chr12	55681546	55684611	55681546	55684611	+	ENST00000394252.3@METTL7B	ENST00000394252.3	protein_coding	55681546,55683813	55682252,55684611	Gene ID= ENSG00000170439.6 TPM= 15.44 Transcript Type= protein_coding
chr12	55684568	55707946	55684568	55707946	-	transcript2206.chr12.nic@ITGA7	transcript2206.chr12.nic	protein_coding	55707477,55703051,55702872,55700899,55699870,55698710,55698383,55697938,55697695,55697451,55697216,55696899,55696283,55695522,55694778,55694615,55694443,55694256,55694021,55693141,55692844,55688844,55688202,55687971,55686202,55684568	55707946,55703178,55702951,55701154,55699989,55698917,55698576,55698026,55697822,55697546,55697277,55697068,55696432,55695637,55694970,55694695,55694522,55694330,55694123,55693317,55692975,55688957,55688300,55688096,55686314,55685288	Gene ID= ENSG00000135424.15 TPM= 118.97 Transcript Type= NA
chr12	55684568	55707898	55684568	55707898	-	ENST00000257879.10@ITGA7	ENST00000257879.10	protein_coding	55707477,55703051,55702872,55700899,55699870,55698710,55698383,55697938,55697695,55697451,55697216,55696899,55696283,55695522,55694778,55694615,55694443,55694256,55694021,55693141,55692844,55688844,55688202,55687971,55684568	55707898,55703178,55702951,55701154,55699989,55698917,55698576,55698026,55697822,55697546,55697277,55697068,55696432,55695637,55694970,55694695,55694522,55694330,55694123,55693317,55692975,55688957,55688300,55688096,55685288	Gene ID= ENSG00000135424.15 TPM= 149.22 Transcript Type= protein_coding
chr12	55684568	55707701	55684568	55707701	-	ENST00000553804.5@ITGA7	ENST00000553804.5	protein_coding	55707477,55703051,55702872,55700899,55700262,55698710,55698383,55697938,55697695,55697451,55697216,55696899,55696283,55695522,55694778,55694615,55694443,55694256,55694021,55693141,55692844,55688844,55688202,55687971,55684568	55707701,55703178,55702951,55701154,55700393,55698917,55698576,55698026,55697822,55697546,55697277,55697068,55696432,55695637,55694970,55694695,55694522,55694330,55694123,55693317,55692975,55688957,55688300,55688096,55685288	Gene ID= ENSG00000135424.15 TPM= 116.4 Transcript Type= protein_coding
chr12	55709951	55719703	55709951	55719703	+	transcript2231.chr12.nnic@BLOC1S1	transcript2231.chr12.nnic	protein_coding	55709951,55715990,55716933,55719091,55719499	55710402,55716196,55717005,55719223,55719703	Gene ID= ENSG00000135441.7 TPM= 4.83 Transcript Type= NA
chr12	55716037	55719703	55716037	55719703	+	ENST00000548925.5@BLOC1S1	ENST00000548925.5	protein_coding	55716037,55716933,55719091,55719499	55716196,55717005,55719223,55719703	Gene ID= ENSG00000135441.7 TPM= 104.74 Transcript Type= protein_coding
chr12	55716531	55719703	55716531	55719703	+	ENST00000548556.1@BLOC1S1	ENST00000548556.1	protein_coding	55716531,55719091,55719499	55716717,55719223,55719703	Gene ID= ENSG00000135441.7 TPM= 3.38 Transcript Type= protein_coding
chr12	55720413	55724705	55720413	55724705	+	ENST00000548082.1@RDH5	ENST00000548082.1	protein_coding	55720413,55721148,55721689,55723886,55724322	55720517,55721494,55721947,55724049,55724705	Gene ID= ENSG00000135437.9 TPM= 1.93 Transcript Type= protein_coding
chr12	55720824	55723307	55720824	55723307	-	transcript2249.chr12.nnic@NA	transcript2249.chr12.nnic	NA	55720824	55723307	Gene ID= novel_gene_chr12_2250 TPM= 1.93 Transcript Type= NA
chr12	55725487	55729220	55725487	55729220	-	ENST00000257857.8@CD63	ENST00000257857.8	protein_coding	55728953,55728276,55727151,55726890,55726700,55726121,55725813,55725487	55729220,55728352,55727339,55726964,55726795,55726261,55725896,55725626	Gene ID= ENSG00000135404.11 TPM= 76.26 Transcript Type= protein_coding
chr12	55725482	55729707	55725482	55729707	-	ENST00000549117.5@CD63	ENST00000549117.5	protein_coding	55729282,55728276,55727151,55726890,55726700,55726121,55725813,55725482	55729707,55728352,55727339,55726964,55726795,55726261,55725896,55725626	Gene ID= ENSG00000135404.11 TPM= 13.76 Transcript Type= protein_coding
chr12	55725470	55728482	55725470	55728482	-	ENST00000552692.5@CD63	ENST00000552692.5	protein_coding	55728276,55727151,55726890,55726700,55726121,55725813,55725470	55728482,55727339,55726964,55726795,55726261,55725896,55725626	Gene ID= ENSG00000135404.11 TPM= 18.1 Transcript Type= protein_coding
chr12	55729104	55730852	55729104	55730852	+	ENST00000552576.2@AC009779.2	ENST00000552576.2	antisense_RNA	55729104,55729662	55729355,55730852	Gene ID= ENSG00000258056.2 TPM= 7.72 Transcript Type= antisense_RNA
chr12	55757274	55817756	55757274	55817756	-	ENST00000336133.7@SARNP	ENST00000336133.7	protein_coding	55817666,55803629,55800854,55800562,55796025,55794807,55794359,55790567,55789075,55760551,55757274	55817756,55803728,55800900,55800629,55796076,55794880,55794387,55790592,55789143,55760640,55757553	Gene ID= ENSG00000205323.8 TPM= 28.96 Transcript Type= protein_coding
chr12	55817919	55821879	55817919	55821879	+	ENST00000243045.9@ORMDL2	ENST00000243045.9	protein_coding	55817919,55818999,55819342,55820260	55818112,55819173,55819493,55821879	Gene ID= ENSG00000123353.9 TPM= 11.58 Transcript Type= protein_coding
chr12	55830841	55836244	55830841	55836244	+	ENST00000508246.6@TMEM198B	ENST00000508246.6	transcribed_unitary_pseudogene	55830841,55831257,55832959,55834851	55831083,55831349,55833541,55836244	Gene ID= ENSG00000182796.13 TPM= 3.86 Transcript Type= processed_transcript
chr12	55836426	55842922	55836426	55842922	-	ENST00000322569.8@MMP19	ENST00000322569.8	protein_coding	55842744,55842353,55841106,55840667,55839496,55838606,55837843,55837555,55836426	55842922,55842438,55841236,55840882,55839741,55838734,55838007,55837682,55837374	Gene ID= ENSG00000123342.15 TPM= 4.83 Transcript Type= protein_coding
chr12	55913826	55927875	55913826	55927875	-	ENST00000454792.2@PYM1	ENST00000454792.2	protein_coding	55927725,55927076,55913826	55927875,55927267,55914366	Gene ID= ENSG00000170473.16 TPM= 1.93 Transcript Type= protein_coding
chr12	55901413	55927913	55901413	55927913	-	ENST00000408946.6@PYM1	ENST00000408946.6	protein_coding	55927725,55903387,55901413	55927913,55903480,55902355	Gene ID= ENSG00000170473.16 TPM= 5.79 Transcript Type= protein_coding
chr12	55901414	55927112	55901414	55927112	-	ENST00000398213.4@PYM1	ENST00000398213.4	protein_coding	55927076,55903387,55901414	55927112,55903480,55902355	Gene ID= ENSG00000170473.16 TPM= 1.93 Transcript Type= protein_coding
chr12	55966769	55972784	55966769	55972784	+	ENST00000266970.8@CDK2	ENST00000266970.8	protein_coding	55966769,55967857,55968049,55968778,55969475,55971044,55971521	55967124,55967934,55968169,55968948,55969576,55971247,55972784	Gene ID= ENSG00000123374.10 TPM= 5.79 Transcript Type= protein_coding
chr12	55974011	55996683	55974011	55996683	+	ENST00000360299.9@RAB5B	ENST00000360299.9	protein_coding	55974011,55986869,55989947,55990682,55991360,55992097	55974139,55987123,55990098,55990804,55991453,55996683	Gene ID= ENSG00000111540.15 TPM= 14.48 Transcript Type= protein_coding
chr12	55997231	56005525	55997231	56005525	+	ENST00000266971.7@SUOX	ENST00000266971.7	protein_coding	55997231,55997615,56002212,56002543,56003618	55997339,55997723,56002271,56002720,56005525	Gene ID= ENSG00000139531.12 TPM= 14.48 Transcript Type= protein_coding
chr12	55997180	56005525	55997180	56005525	+	ENST00000356124.8@SUOX	ENST00000356124.8	protein_coding	55997180,56002212,56002543,56003618	55997339,56002271,56002720,56005525	Gene ID= ENSG00000139531.12 TPM= 2.9 Transcript Type= protein_coding
chr12	56041853	56044675	56041853	56044675	+	ENST00000356464.9@RPS26	ENST00000356464.9	protein_coding	56041853,56042425,56043363,56044119	56042169,56042602,56043493,56044675	Gene ID= ENSG00000197728.9 TPM= 5.79 Transcript Type= protein_coding
chr12	56104319	56113861	56104319	56113861	+	ENST00000303305.10@PA2G4	ENST00000303305.10	protein_coding	56104319,56106588,56106990,56107187,56107521,56109230,56109857,56110399,56110559,56110964,56111182,56111476,56112823	56104825,56106716,56107095,56107256,56107613,56109293,56109935,56110477,56110692,56111058,56111309,56111529,56113861	Gene ID= ENSG00000170515.13 TPM= 122.59 Transcript Type= protein_coding
chr12	56116629	56117832	56116629	56117832	+	transcript2330.chr12.nnic@RPL41	transcript2330.chr12.nnic	protein_coding	56116629,56116775,56117189,56117482	56116659,56116863,56117211,56117832	Gene ID= ENSG00000229117.8 TPM= 62.19 Transcript Type= NA
chr12	56116586	56117943	56116586	56117943	+	ENST00000546591.5@RPL41	ENST00000546591.5	protein_coding	56116586,56117189,56117482	56116799,56117211,56117943	Gene ID= ENSG00000229117.8 TPM= 120.1 Transcript Type= protein_coding
chr12	56116590	56117832	56116590	56117832	+	ENST00000501597.3@RPL41	ENST00000501597.3	protein_coding	56116590,56116775,56117189,56117482	56116659,56116799,56117211,56117832	Gene ID= ENSG00000229117.8 TPM= 1511.6 Transcript Type= protein_coding
chr12	56116632	56117710	56116632	56117710	+	ENST00000546485.5@RPL41	ENST00000546485.5	protein_coding	56116632,56116775,56117189,56117482	56116659,56116829,56117211,56117710	Gene ID= ENSG00000229117.8 TPM= 1.45 Transcript Type= processed_transcript
chr12	56116633	56117826	56116633	56117826	+	ENST00000358888.7@RPL41	ENST00000358888.7	protein_coding	56116633,56116775,56117189,56117482	56116659,56116930,56117211,56117826	Gene ID= ENSG00000229117.8 TPM= 20.03 Transcript Type= processed_transcript
chr12	56118159	56127514	56118159	56127514	+	ENST00000257940.6@ZC3H10	ENST00000257940.6	protein_coding	56118159,56119088,56120511	56118318,56119151,56127514	Gene ID= ENSG00000135482.6 TPM= 16.89 Transcript Type= protein_coding
chr12	56125235	56144671	56125235	56144671	+	transcript2323.chr12.nic@ESYT1	transcript2323.chr12.nic	protein_coding	56125235,56130582,56130791,56131040,56131244,56131477,56131749,56132209,56132421,56132719,56133417,56133588,56133781,56134110,56134342,56136744,56137218,56137499,56137832,56138026,56138183,56138404,56138768,56138927,56142578,56142835,56143017,56143228,56143580,56143823	56128709,56130623,56130925,56131113,56131316,56131566,56131804,56132332,56132597,56132801,56133465,56133674,56133873,56134181,56134428,56136893,56137373,56137675,56137914,56138074,56138272,56138499,56138839,56139013,56142732,56142933,56143148,56143333,56143629,56144671	Gene ID= ENSG00000139641.12 TPM= 29.44 Transcript Type= NA
chr12	56152555	56157976	56152555	56157976	+	transcript2339.chr12.nic@MYL6B	transcript2339.chr12.nic	protein_coding	56152555,56153873,56154813,56155055,56155419,56157468,56157698,56157882	56152631,56154092,56154840,56155198,56155592,56157545,56157735,56157976	Gene ID= ENSG00000196465.10 TPM= 31.86 Transcript Type= NA
chr12	56152439	56157976	56152439	56157976	+	ENST00000550443.5@MYL6B	ENST00000550443.5	protein_coding	56152439,56153809,56154813,56155055,56155419,56157468,56157698,56157882	56152631,56154092,56154840,56155198,56155592,56157545,56157735,56157976	Gene ID= ENSG00000196465.10 TPM= 18.34 Transcript Type= protein_coding
chr12	56158317	56161575	56158317	56161575	+	transcript2374.chr12.nnic@MYL6	transcript2374.chr12.nnic	protein_coding	56158317,56158684,56158902,56159587,56159975,56160243,56160626,56161387	56158404,56158711,56158920,56159622,56160148,56160320,56160670,56161575	Gene ID= ENSG00000092841.18 TPM= 27.48 Transcript Type= NA
chr12	56158317	56161575	56158317	56161575	+	transcript2375.chr12.nnic@MYL6	transcript2375.chr12.nnic	protein_coding	56158317,56158684,56158902,56159587,56159975,56160243,56160626,56161387	56158404,56158711,56158920,56159730,56160148,56160320,56160670,56161575	Gene ID= ENSG00000092841.18 TPM= 198.39 Transcript Type= NA
chr12	56158161	56161574	56158161	56161574	+	ENST00000550697.5@MYL6	ENST00000550697.5	protein_coding	56158161,56158684,56159587,56159975,56160243,56160626,56161387	56158404,56158711,56159730,56160148,56160320,56160670,56161574	Gene ID= ENSG00000092841.18 TPM= 88.92 Transcript Type= protein_coding
chr12	56158317	56161575	56158317	56161575	+	transcript2382.chr12.nnic@MYL6	transcript2382.chr12.nnic	protein_coding	56158317,56158684,56158902,56159587,56159975,56160243	56158404,56158711,56158920,56159730,56160148,56161575	Gene ID= ENSG00000092841.18 TPM= 14.48 Transcript Type= NA
chr12	56158362	56161574	56158362	56161574	+	ENST00000547649.5@MYL6	ENST00000547649.5	protein_coding	56158362,56158684,56159587,56159975,56160243,56161387	56158404,56158711,56159730,56160148,56160320,56161574	Gene ID= ENSG00000092841.18 TPM= 73.56 Transcript Type= protein_coding
chr12	56158349	56161550	56158349	56161550	+	ENST00000550184.5@MYL6	ENST00000550184.5	protein_coding	56158349,56158684,56159975,56160243,56160626,56161387	56158404,56159730,56160148,56160320,56160670,56161550	Gene ID= ENSG00000092841.18 TPM= 2.9 Transcript Type= retained_intron
chr12	56163328	56189520	56163328	56189520	-	transcript2347.chr12.nic@SMARCC2	transcript2347.chr12.nic	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164648,56164303,56163328	56189520,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56164368,56163765	Gene ID= ENSG00000139613.11 TPM= 6.27 Transcript Type= NA
chr12	56162359	56189504	56162359	56189504	-	transcript2353.chr12.nic@SMARCC2	transcript2353.chr12.nic	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164648,56162359	56189504,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765	Gene ID= ENSG00000139613.11 TPM= 10.94 Transcript Type= NA
chr12	56163330	56189548	56163330	56189548	-	ENST00000347471.8@SMARCC2	ENST00000347471.8	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172937,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164648,56163330	56189548,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56173029,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765	Gene ID= ENSG00000139613.11 TPM= 35.55 Transcript Type= protein_coding
chr12	56163328	56189476	56163328	56189476	-	ENST00000550164.5@SMARCC2	ENST00000550164.5	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172937,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164303,56163328	56189476,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56173029,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765	Gene ID= ENSG00000139613.11 TPM= 4.83 Transcript Type= protein_coding
chr12	56205450	56221999	56205450	56221999	-	transcript2401.chr12.nic@RNF41	transcript2401.chr12.nic	protein_coding	56221903,56216429,56213958,56212996,56210297,56208163,56207646,56205450	56221999,56216613,56214070,56213138,56210568,56208298,56207749,56206798	Gene ID= ENSG00000181852.17 TPM= 3.86 Transcript Type= NA
chr12	56205450	56221909	56205450	56221909	-	ENST00000394013.6@RNF41	ENST00000394013.6	protein_coding	56221760,56216429,56213958,56212996,56210297,56208163,56207646,56205450	56221909,56216613,56214070,56213138,56210568,56208298,56207749,56206798	Gene ID= ENSG00000181852.17 TPM= 4.83 Transcript Type= protein_coding
chr12	56224325	56229854	56224325	56229854	+	ENST00000267023.8@NABP2	ENST00000267023.8	protein_coding	56224325,56224834,56225373,56225624,56226179,56226356,56229014	56224441,56224935,56225511,56225695,56226260,56226419,56229854	Gene ID= ENSG00000139579.12 TPM= 17.06 Transcript Type= protein_coding
chr12	56224359	56229854	56224359	56229854	+	ENST00000380198.6@NABP2	ENST00000380198.6	protein_coding	56224359,56225373,56225624,56226179,56226356,56229014	56224935,56225511,56225695,56226260,56226419,56229854	Gene ID= ENSG00000139579.12 TPM= 13.2 Transcript Type= protein_coding
chr12	56224401	56229844	56224401	56229844	+	ENST00000341463.5@NABP2	ENST00000341463.5	protein_coding	56224401,56224834,56225373,56225624,56226179,56226356,56229014	56224521,56224935,56225511,56225695,56226260,56226419,56229844	Gene ID= ENSG00000139579.12 TPM= 3.54 Transcript Type= protein_coding
chr12	56238217	56238559	56238217	56238559	-	transcript2415.chr12.nnic@NA	transcript2415.chr12.nnic	NA	56238217	56238559	Gene ID= novel_gene_chr12_2416 TPM= 3.86 Transcript Type= NA
chr12	56237807	56258391	56237807	56258391	-	ENST00000267116.7@ANKRD52	ENST00000267116.7	protein_coding	56258243,56257828,56257283,56257015,56255784,56254865,56254578,56254067,56253722,56253288,56253004,56252780,56252502,56252175,56252015,56248759,56248495,56248023,56247687,56247493,56245377,56245103,56244906,56244652,56244353,56244051,56243785,56237807	56258391,56257911,56257361,56257085,56255984,56254952,56254720,56254279,56253800,56253402,56253086,56252897,56252570,56252315,56252095,56248870,56248566,56248224,56247774,56247610,56245596,56245190,56244989,56244797,56244435,56244133,56243876,56243392	Gene ID= ENSG00000139645.9 TPM= 21.24 Transcript Type= protein_coding
chr12	56266941	56270961	56266941	56270961	+	transcript2420.chr12.nic@COQ10A	transcript2420.chr12.nic	protein_coding	56266941,56267794,56269059,56269460,56270150,56270451	56267252,56267940,56269251,56269561,56270318,56270961	Gene ID= ENSG00000135469.13 TPM= 3.14 Transcript Type= NA
chr12	56266858	56270964	56266858	56270964	+	ENST00000308197.9@COQ10A	ENST00000308197.9	protein_coding	56266858,56267794,56269059,56269460,56270150	56267252,56267940,56269251,56269561,56270964	Gene ID= ENSG00000135469.13 TPM= 60.09 Transcript Type= protein_coding
chr12	56266858	56270964	56266858	56270964	+	transcript2427.chr12.nic@COQ10A	transcript2427.chr12.nic	protein_coding	56266858,56267794,56270150	56267252,56269561,56270964	Gene ID= ENSG00000135469.13 TPM= 5.79 Transcript Type= NA
chr12	56267283	56270966	56267283	56270966	+	ENST00000433805.6@COQ10A	ENST00000433805.6	protein_coding	56267283,56267794,56269059,56269460,56270150	56267433,56267940,56269251,56269561,56270966	Gene ID= ENSG00000135469.13 TPM= 18.58 Transcript Type= protein_coding
chr12	56267682	56270964	56267682	56270964	+	ENST00000546544.5@COQ10A	ENST00000546544.5	protein_coding	56267682,56269059,56269460,56270150	56267940,56269251,56269561,56270964	Gene ID= ENSG00000135469.13 TPM= 7.96 Transcript Type= protein_coding
chr12	56271701	56300391	56271701	56300391	-	ENST00000548567.5@CS	ENST00000548567.5	protein_coding	56300160,56298609,56286595,56285916,56283792,56282860,56282420,56275996,56275002,56274777,56273587,56271701	56300391,56298691,56286645,56286023,56283857,56282991,56282608,56276195,56275131,56274878,56273796,56273254	Gene ID= ENSG00000062485.18 TPM= 18.27 Transcript Type= protein_coding
chr12	56271701	56300392	56271701	56300392	-	ENST00000351328.7@CS	ENST00000351328.7	protein_coding	56300160,56286595,56285916,56283792,56282860,56282420,56275996,56275002,56274777,56273587,56271701	56300392,56286645,56286023,56283857,56282991,56282608,56276195,56275131,56274878,56273796,56273254	Gene ID= ENSG00000062485.18 TPM= 492.72 Transcript Type= protein_coding
chr12	56271701	56300386	56271701	56300386	-	transcript2456.chr12.nic@CS	transcript2456.chr12.nic	protein_coding	56300160,56285916,56283792,56282860,56282420,56275996,56275002,56274777,56273587,56271701	56300386,56286645,56283857,56282991,56282608,56276195,56275131,56274878,56273796,56273254	Gene ID= ENSG00000062485.18 TPM= 24.07 Transcript Type= NA
chr12	56276152	56300341	56276152	56300341	-	ENST00000550734.5@CS	ENST00000550734.5	protein_coding	56300160,56286595,56285916,56283792,56282860,56282420,56276152	56300341,56286620,56286023,56283857,56282991,56282608,56276195	Gene ID= ENSG00000062485.18 TPM= 6.76 Transcript Type= protein_coding
chr12	56300142	56314788	56300142	56314788	+	ENST00000549565.1@AC073896.2	ENST00000549565.1	antisense_RNA	56300142,56312407,56314529	56300187,56312499,56314788	Gene ID= ENSG00000257303.1 TPM= 9.65 Transcript Type= antisense_RNA
chr12	56310428	56316336	56310428	56316336	-	ENST00000273308.8@CNPY2	ENST00000273308.8	protein_coding	56315821,56315130,56314851,56311211,56310958,56310428	56316336,56315242,56314966,56311414,56311054,56310595	Gene ID= ENSG00000257727.5 TPM= 20.27 Transcript Type= protein_coding
chr12	56314490	56316047	56314490	56316047	-	ENST00000548013.5@CNPY2	ENST00000548013.5	protein_coding	56315821,56315130,56314490	56316047,56315242,56314966	Gene ID= ENSG00000257727.5 TPM= 10.62 Transcript Type= retained_intron
chr12	56316223	56334053	56316223	56334053	-	ENST00000610546.4@PAN2	ENST00000610546.4	protein_coding	56333862,56332813,56328472,56328238,56327995,56327364,56326617,56326313,56325335,56325009,56324581,56324294,56324037,56323807,56323500,56323311,56323062,56322615,56322423,56322078,56319864,56319621,56319308,56319088,56318237,56316223	56334053,56333208,56328641,56328358,56328072,56327631,56326959,56326409,56325454,56325128,56324709,56324493,56324185,56323913,56323598,56323384,56323209,56322758,56322482,56322168,56320021,56319764,56319487,56319181,56318434,56317643	Gene ID= ENSG00000135473.14 TPM= 1.93 Transcript Type= protein_coding
chr12	56316937	56334006	56316937	56334006	-	ENST00000257931.9@PAN2	ENST00000257931.9	protein_coding	56333862,56332813,56328472,56328238,56327995,56327364,56326617,56326313,56325335,56325009,56324581,56324294,56324037,56323807,56323500,56323311,56323062,56322615,56322423,56322078,56319864,56319621,56319308,56319088,56318237,56316937	56334006,56333208,56328641,56328358,56328072,56327631,56326959,56326409,56325454,56325128,56324709,56324493,56324182,56323913,56323598,56323384,56323209,56322758,56322482,56322168,56320021,56319764,56319487,56319181,56318434,56317643	Gene ID= ENSG00000135473.14 TPM= 1.93 Transcript Type= protein_coding
chr12	56417119	56449403	56417119	56449403	-	ENST00000229201.4@TIMELESS	ENST00000229201.4	protein_coding	56449310,56434074,56433773,56433538,56433381,56433026,56432369,56431471,56430881,56430105,56428883,56428549,56428236,56425015,56424762,56423797,56423584,56423274,56422847,56422106,56421899,56421727,56421351,56420963,56420813,56420569,56418134,56417907,56417119	56449403,56434231,56433926,56433652,56433443,56433127,56432521,56431604,56430968,56430281,56429100,56428652,56428405,56425152,56424913,56423894,56423707,56423475,56422992,56422191,56422016,56421809,56421493,56421134,56420881,56420687,56418359,56418008,56417786	Gene ID= ENSG00000111602.11 TPM= 13.51 Transcript Type= protein_coding
chr12	56592468	56595599	56592468	56595599	+	transcript2487.chr12.nnic@NA	transcript2487.chr12.nnic	NA	56592468	56595599	Gene ID= novel_gene_chr12_2488 TPM= 4.83 Transcript Type= NA
chr12	56595930	56636379	56595930	56636379	-	ENST00000551812.5@BAZ2A	ENST00000551812.5	protein_coding	56636182,56617395,56615014,56613953,56613015,56611773,56611573,56610409,56610114,56609736,56606633,56606247,56605830,56605073,56604585,56604217,56603520,56603359,56602713,56601546,56601180,56600943,56600681,56600201,56599964,56599702,56599129,56598868,56595930	56636379,56617532,56615607,56614138,56613233,56612246,56611633,56610517,56610215,56609946,56606733,56606312,56606063,56605327,56604799,56604291,56603700,56603418,56602857,56602192,56601402,56601098,56600832,56600490,56600096,56599848,56599358,56599011,56598783	Gene ID= ENSG00000076108.11 TPM= 19.31 Transcript Type= protein_coding
chr12	56638179	56646029	56638179	56646029	-	transcript2497.chr12.nic@ATP5B	transcript2497.chr12.nic	protein_coding	56645837,56644781,56643837,56643403,56642673,56642458,56639980,56639106,56638179	56646029,56644955,56643958,56643587,56642831,56642580,56640192,56639307,56638423	Gene ID= ENSG00000110955.8 TPM= 68.54 Transcript Type= NA
chr12	56638179	56646068	56638179	56646068	-	ENST00000262030.7@ATP5B	ENST00000262030.7	protein_coding	56645837,56645171,56644781,56643837,56643403,56642673,56642458,56639980,56639106,56638179	56646068,56645353,56644955,56643958,56643587,56642831,56642580,56640192,56639307,56638423	Gene ID= ENSG00000110955.8 TPM= 970.14 Transcript Type= protein_coding
chr12	56663343	56688408	56663343	56688408	-	ENST00000614328.4@PTGES3	ENST00000614328.4	protein_coding	56687998,56686869,56672952,56672740,56671749,56670275,56666204,56664776,56663343	56688408,56686917,56673065,56672809,56671847,56670364,56666266,56664800,56664498	Gene ID= ENSG00000110958.15 TPM= 3.09 Transcript Type= protein_coding
chr12	56663343	56688300	56663343	56688300	-	ENST00000262033.10@PTGES3	ENST00000262033.10	protein_coding	56687998,56672952,56672740,56671749,56670275,56666204,56664776,56663343	56688300,56673065,56672809,56671847,56670364,56666266,56664800,56664498	Gene ID= ENSG00000110958.15 TPM= 235.73 Transcript Type= protein_coding
chr12	56663613	56688287	56663613	56688287	-	ENST00000414274.7@PTGES3	ENST00000414274.7	protein_coding	56687998,56672952,56672740,56671749,56666204,56664776,56663613	56688287,56673065,56672809,56671847,56666266,56664800,56664498	Gene ID= ENSG00000110958.15 TPM= 4.1 Transcript Type= protein_coding
chr12	56712433	56727197	56712433	56727197	-	ENST00000356769.7@NACA	ENST00000356769.7	protein_coding	56725263,56724452,56714602,56714362,56713537,56713062,56712786,56712433	56727197,56724523,56714687,56714439,56713683,56713190,56712908,56712552	Gene ID= ENSG00000196531.10 TPM= 75.13 Transcript Type= protein_coding
chr12	56712428	56725542	56712428	56725542	-	ENST00000454682.5@NACA	ENST00000454682.5	protein_coding	56725263,56724452,56715871,56714602,56714362,56713537,56713062,56712786,56712428	56725542,56724523,56721459,56714687,56714439,56713683,56713190,56712908,56712552	Gene ID= ENSG00000196531.10 TPM= 341.24 Transcript Type= protein_coding
chr12	56712435	56725267	56712435	56725267	-	ENST00000393891.8@NACA	ENST00000393891.8	protein_coding	56724962,56724452,56714602,56714362,56713537,56713062,56712786,56712435	56725267,56724523,56714687,56714439,56713683,56713190,56712908,56712552	Gene ID= ENSG00000196531.10 TPM= 10.45 Transcript Type= protein_coding
chr12	56731596	56752373	56731596	56752373	-	ENST00000552590.6@PRIM1	ENST00000552590.6	protein_coding	56752196,56751038,56746926,56746777,56746045,56744065,56742987,56741746,56741435,56739294,56738434,56734147,56731596	56752373,56751195,56747032,56746854,56746179,56744123,56743096,56741837,56741576,56739363,56738525,56734245,56731734	Gene ID= ENSG00000198056.13 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	57088894	57095476	57088894	57095476	+	ENST00000300131.7@NAB2	ENST00000300131.7	protein_coding	57088894,57091125,57092448,57092917,57093063,57093407,57094612	57089354,57091998,57092581,57092968,57093195,57093598,57095476	Gene ID= ENSG00000166886.12 TPM= 11.58 Transcript Type= protein_coding
chr12	57095408	57111433	57095408	57111433	-	ENST00000300134.7@STAT6	ENST00000300134.7	protein_coding	57111129,57108163,57107605,57107231,57106693,57106528,57106191,57105468,57105151,57104726,57104464,57102829,57102290,57099996,57099767,57099294,57099015,57098792,57098505,57097068,57096850,57095408	57111433,57108299,57107743,57107314,57106831,57106580,57106339,57105599,57105339,57104813,57104586,57102921,57102496,57100090,57099903,57099440,57099078,57098902,57098597,57097133,57096978,57096761	Gene ID= ENSG00000166888.11 TPM= 8.69 Transcript Type= protein_coding
chr12	57229327	57234931	57229327	57234931	+	ENST00000328923.7@SHMT2	ENST00000328923.7	protein_coding	57229327,57230803,57231481,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57229811,57231000,57231560,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234931	Gene ID= ENSG00000182199.10 TPM= 17.13 Transcript Type= protein_coding
chr12	57230086	57234726	57230086	57234726	+	ENST00000414700.7@SHMT2	ENST00000414700.7	protein_coding	57230086,57230803,57231481,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57230244,57231000,57231560,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234726	Gene ID= ENSG00000182199.10 TPM= 9.41 Transcript Type= protein_coding
chr12	57229573	57234935	57229573	57234935	+	ENST00000556825.5@SHMT2	ENST00000556825.5	protein_coding	57229573,57230803,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57229811,57231000,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234935	Gene ID= ENSG00000182199.10 TPM= 3.62 Transcript Type= nonsense_mediated_decay
chr12	57229759	57234726	57229759	57234726	+	ENST00000557433.5@SHMT2	ENST00000557433.5	protein_coding	57229759,57230803,57231481,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57229811,57231000,57231560,57231917,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234726	Gene ID= ENSG00000182199.10 TPM= 3.62 Transcript Type= nonsense_mediated_decay
chr12	57234903	57237338	57234903	57237338	-	ENST00000554503.5@NDUFA4L2	ENST00000554503.5	protein_coding	57237029,57236593,57235749,57234903	57237338,57236681,57235809,57235619	Gene ID= ENSG00000185633.10 TPM= 45.85 Transcript Type= protein_coding
chr12	57234911	57237100	57234911	57237100	-	ENST00000555173.1@NDUFA4L2	ENST00000555173.1	protein_coding	57237029,57236324,57235749,57234911	57237100,57236681,57235809,57235619	Gene ID= ENSG00000185633.10 TPM= 2.41 Transcript Type= retained_intron
chr12	57243459	57251187	57243459	57251187	-	transcript2568.chr12.nnic@STAC3	transcript2568.chr12.nnic	protein_coding	57250993,57248706,57248126,57246804,57245145,57244916,57244537,57244315,57244088,57243459	57251187,57248803,57248198,57246901,57245211,57244965,57244622,57244366,57244225,57243910	Gene ID= ENSG00000185482.7 TPM= 11.58 Transcript Type= NA
chr12	57243453	57251193	57243453	57251193	-	ENST00000332782.6@STAC3	ENST00000332782.6	protein_coding	57250993,57249571,57249041,57248706,57248126,57246804,57245145,57244916,57244537,57244315,57244088,57243453	57251193,57249637,57249308,57248803,57248198,57246901,57245211,57244965,57244622,57244366,57244225,57243910	Gene ID= ENSG00000185482.7 TPM= 64.68 Transcript Type= protein_coding
chr12	57248379	57250139	57248379	57250139	-	transcript2578.chr12.nnic@NA	transcript2578.chr12.nnic	NA	57248379	57250139	Gene ID= novel_gene_chr12_2579 TPM= 7.72 Transcript Type= NA
chr12	57253765	57430830	57253765	57430830	-	transcript2582.chr12.nic@R3HDM2	transcript2582.chr12.nic	protein_coding	57430720,57395749,57310264,57303176,57300095,57299352,57298090,57297328,57296411,57295399,57292572,57289009,57288857,57283824,57280358,57269752,57269323,57268922,57268303,57266731,57258890,57257990,57256414,57255990,57253765	57430830,57395818,57310463,57303217,57300181,57299478,57298168,57297387,57296551,57295507,57292667,57289040,57288910,57284056,57280530,57269994,57269449,57269082,57268457,57266831,57259059,57258137,57256511,57256074,57255113	Gene ID= ENSG00000179912.20 TPM= 27.51 Transcript Type= NA
chr12	57253764	57431005	57253764	57431005	-	ENST00000347140.7@R3HDM2	ENST00000347140.7	protein_coding	57430720,57395749,57310264,57303176,57300095,57299352,57298090,57297328,57296411,57295399,57289009,57288857,57283824,57280358,57269752,57269323,57268922,57268303,57266731,57258890,57257990,57256414,57255990,57253764	57431005,57395818,57310463,57303217,57300181,57299478,57298168,57297387,57296551,57295507,57289040,57288910,57284056,57280530,57269994,57269449,57269082,57268457,57266831,57259059,57258137,57256511,57256074,57255113	Gene ID= ENSG00000179912.20 TPM= 23.65 Transcript Type= protein_coding
chr12	57488066	57516649	57488066	57516649	+	transcript2596.chr12.nnic@MARS	transcript2596.chr12.nnic	protein_coding	57488066,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512236,57512751,57514720,57514954,57515150,57515920,57516116,57516245,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57515991,57516158,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 5.89 Transcript Type= NA
chr12	57487957	57516649	57487957	57516649	+	ENST00000262027.9@MARS	ENST00000262027.9	protein_coding	57487957,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512236,57512751,57514720,57514954,57515150,57515920,57516245,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57515991,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 91.32 Transcript Type= protein_coding
chr12	57488066	57516649	57488066	57516649	+	transcript2604.chr12.nic@MARS	transcript2604.chr12.nic	protein_coding	57488066,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512236,57512751,57514720,57514954,57515150,57515920,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 10.71 Transcript Type= NA
chr12	57488066	57516655	57488066	57516655	+	ENST00000545888.6@MARS	ENST00000545888.6	protein_coding	57488066,57489019,57489267,57489424,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512236,57512751,57514720,57514954,57515150,57515920,57516435	57488199,57489109,57489345,57489558,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57516337,57516655	Gene ID= ENSG00000166986.14 TPM= 7.19 Transcript Type= nonsense_mediated_decay
chr12	57516593	57520517	57516593	57520517	-	ENST00000346473.7@DDIT3	ENST00000346473.7	protein_coding	57520418,57517706,57517269,57516593	57520517,57517753,57517438,57517180	Gene ID= ENSG00000175197.11 TPM= 50.2 Transcript Type= protein_coding
chr12	57530102	57547331	57530102	57547331	-	ENST00000548249.5@DCTN2	ENST00000548249.5	protein_coding	57547028,57546028,57535749,57535484,57535056,57534292,57533953,57533238,57532984,57532733,57532572,57532213,57532015,57530102	57547331,57546096,57535845,57535545,57535154,57534452,57534097,57533303,57533022,57532810,57532643,57532315,57532106,57530775	Gene ID= ENSG00000175203.15 TPM= 23.49 Transcript Type= protein_coding
chr12	57530354	57547152	57530354	57547152	-	ENST00000550201.5@DCTN2	ENST00000550201.5	protein_coding	57547028,57546028,57535749,57535484,57535056,57534292,57533953,57533238,57532984,57532733,57532572,57532015,57530354	57547152,57546096,57535845,57535545,57535154,57534452,57534097,57533303,57533022,57532810,57532643,57532106,57530775	Gene ID= ENSG00000175203.15 TPM= 3.21 Transcript Type= nonsense_mediated_decay
chr12	57530311	57547141	57530311	57547141	-	ENST00000434715.7@DCTN2	ENST00000434715.7	protein_coding	57547028,57546028,57541364,57538519,57535749,57535484,57535056,57534292,57533953,57533238,57532984,57532733,57532572,57532213,57532015,57530311	57547141,57546096,57541372,57538524,57535845,57535545,57535154,57534452,57534097,57533303,57533022,57532810,57532643,57532315,57532106,57530775	Gene ID= ENSG00000175203.15 TPM= 10.94 Transcript Type= protein_coding
chr12	57591274	57603248	57591274	57603248	+	ENST00000354947.9@PIP4K2C	ENST00000354947.9	protein_coding	57591274,57594025,57595126,57595888,57599065,57599400,57600324,57600811,57601245,57601526	57591463,57594122,57595222,57596031,57599211,57599438,57600437,57601078,57601348,57603248	Gene ID= ENSG00000166908.17 TPM= 2.9 Transcript Type= protein_coding
chr12	57604622	57609800	57604622	57609800	+	ENST00000548804.5@DTX3	ENST00000548804.5	protein_coding	57604622,57606190,57606443,57606865,57608520,57609077	57604858,57606252,57606518,57607613,57608737,57609800	Gene ID= ENSG00000178498.15 TPM= 1.93 Transcript Type= protein_coding
chr12	57626172	57632713	57626172	57632713	-	transcript2641.chr12.nic@B4GALNT1	transcript2641.chr12.nic	protein_coding	57632541,57631915,57631200,57630980,57630478,57630152,57629048,57628713,57628122,57627618,57626172	57632713,57632133,57631364,57631086,57630518,57630332,57629146,57628903,57628262,57627858,57626961	Gene ID= ENSG00000135454.13 TPM= 3.09 Transcript Type= NA
chr12	57625895	57633355	57625895	57633355	-	ENST00000341156.8@B4GALNT1	ENST00000341156.8	protein_coding	57632772,57631915,57631200,57630980,57630478,57630152,57629048,57628713,57628122,57627618,57625895	57633355,57632133,57631364,57631086,57630518,57630332,57629146,57628903,57628262,57627858,57626961	Gene ID= ENSG00000135454.13 TPM= 8.88 Transcript Type= protein_coding
chr12	57626172	57633196	57626172	57633196	-	transcript2644.chr12.nic@B4GALNT1	transcript2644.chr12.nic	protein_coding	57632772,57631915,57631200,57630980,57630478,57630152,57629048,57628713,57628122,57627618,57626172	57633196,57632133,57631364,57631086,57630518,57630332,57629146,57628903,57628262,57627891,57626961	Gene ID= ENSG00000135454.13 TPM= 4.05 Transcript Type= NA
chr12	57628452	57633196	57628452	57633196	-	transcript2649.chr12.nic@B4GALNT1	transcript2649.chr12.nic	protein_coding	57632772,57631915,57631200,57630980,57630478,57630152,57629048,57628452	57633196,57632133,57631364,57631086,57630518,57630332,57629146,57628903	Gene ID= ENSG00000135454.13 TPM= 4.05 Transcript Type= NA
chr12	57629329	57633202	57629329	57633202	-	ENST00000550764.5@B4GALNT1	ENST00000550764.5	protein_coding	57632772,57631915,57631200,57630980,57630478,57629329	57633202,57632133,57631364,57631086,57630518,57630332	Gene ID= ENSG00000135454.13 TPM= 9.85 Transcript Type= protein_coding
chr12	57694145	57721555	57694145	57721555	+	ENST00000257966.12@OS9	ENST00000257966.12	protein_coding	57694145,57694750,57695780,57695962,57696275,57715760,57716089,57716412,57716693,57717870,57718146,57718993,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718421,57719182,57720518,57721555	Gene ID= ENSG00000135506.15 TPM= 64.03 Transcript Type= protein_coding
chr12	57694121	57721555	57694121	57721555	+	ENST00000315970.11@OS9	ENST00000315970.11	protein_coding	57694121,57694750,57695780,57695962,57696275,57715760,57716092,57716412,57716693,57717870,57718146,57718993,57720099,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718421,57719182,57720263,57720518,57721555	Gene ID= ENSG00000135506.15 TPM= 36.04 Transcript Type= protein_coding
chr12	57694147	57721557	57694147	57721557	+	ENST00000389142.9@OS9	ENST00000389142.9	protein_coding	57694147,57694750,57695780,57695962,57696275,57715760,57716092,57716412,57716693,57717870,57718146,57718993,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718376,57719182,57720518,57721557	Gene ID= ENSG00000135506.15 TPM= 9.01 Transcript Type= protein_coding
chr12	57744881	57748232	57744881	57748232	+	ENST00000257910.7@TSPAN31	ENST00000257910.7	protein_coding	57744881,57745745,57746176,57746589,57747018,57747216	57745217,57745912,57746256,57746720,57747131,57748232	Gene ID= ENSG00000135452.9 TPM= 35.72 Transcript Type= protein_coding
chr12	57747727	57752521	57747727	57752521	-	ENST00000257904.10@CDK4	ENST00000257904.10	protein_coding	57752175,57751500,57751207,57750923,57750656,57749454,57749182,57747727	57752521,57751736,57751342,57751090,57750765,57749504,57749317,57748617	Gene ID= ENSG00000135446.16 TPM= 9.65 Transcript Type= protein_coding
chr12	57757487	57759416	57757487	57759416	+	ENST00000548358.1@MARCH9	ENST00000548358.1	protein_coding	57757487,57758563	57758300,57759416	Gene ID= ENSG00000139266.5 TPM= 1.93 Transcript Type= protein_coding
chr12	57768471	57772793	57768471	57772793	-	ENST00000324871.11@METTL1	ENST00000324871.11	protein_coding	57771974,57771094,57769772,57769565,57769303,57768471	57772793,57771257,57769956,57769678,57769404,57769151	Gene ID= ENSG00000037897.16 TPM= 4.83 Transcript Type= protein_coding
chr12	57768582	57772119	57768582	57772119	-	ENST00000257848.7@METTL1	ENST00000257848.7	protein_coding	57771974,57771094,57769565,57769303,57768582	57772119,57771257,57769678,57769404,57769151	Gene ID= ENSG00000037897.16 TPM= 1.93 Transcript Type= protein_coding
chr12	57768638	57769655	57768638	57769655	-	ENST00000547653.1@METTL1	ENST00000547653.1	protein_coding	57769565,57769303,57768638	57769655,57769423,57769151	Gene ID= ENSG00000037897.16 TPM= 1.93 Transcript Type= protein_coding
chr12	57772211	57804415	57772211	57804415	+	transcript2697.chr12.nic@TSFM	transcript2697.chr12.nic	protein_coding	57772211,57773017,57783110,57786163,57787040,57792986,57802555	57772397,57773128,57783283,57786291,57787162,57793073,57804415	Gene ID= ENSG00000123297.17 TPM= 3.86 Transcript Type= NA
chr12	57782589	57797584	57782589	57797584	+	ENST00000454289.7@TSFM	ENST00000454289.7	protein_coding	57782589,57783110,57786163,57787040,57792986,57796177	57782858,57783283,57786291,57787162,57793073,57797584	Gene ID= ENSG00000123297.17 TPM= 24.13 Transcript Type= protein_coding
chr12	57822800	57846723	57822800	57846723	-	transcript2693.chr12.nic@CTDSP2	transcript2693.chr12.nic	protein_coding	57846372,57829448,57827552,57826996,57826346,57824227,57823904,57822800	57846723,57829596,57827590,57827097,57826402,57824319,57824005,57823727	Gene ID= ENSG00000175215.10 TPM= 1.93 Transcript Type= NA
chr12	57822800	57846724	57822800	57846724	-	transcript2694.chr12.nic@CTDSP2	transcript2694.chr12.nic	protein_coding	57846372,57829448,57827534,57826996,57826346,57824227,57823904,57822800	57846724,57829596,57827590,57827097,57826402,57824319,57824089,57823727	Gene ID= ENSG00000175215.10 TPM= 2.9 Transcript Type= NA
chr12	57819927	57846739	57819927	57846739	-	ENST00000398073.6@CTDSP2	ENST00000398073.6	protein_coding	57846372,57829448,57827552,57826996,57826346,57824227,57823904,57819927	57846739,57829596,57827590,57827097,57826402,57824319,57824089,57823727	Gene ID= ENSG00000175215.10 TPM= 66.61 Transcript Type= protein_coding
chr12	57825030	57826808	57825030	57826808	-	transcript2711.chr12.nnic@NA	transcript2711.chr12.nnic	NA	57825030	57826808	Gene ID= novel_gene_chr12_2712 TPM= 1.93 Transcript Type= NA
chr12	58872149	58920522	58872149	58920522	-	ENST00000320743.7@LRIG3	ENST00000320743.7	protein_coding	58920000,58914265,58913982,58890665,58889996,58888819,58888329,58887789,58886810,58885831,58883520,58882869,58880581,58878824,58877400,58876445,58874430,58874055,58872149	58920522,58914336,58914056,58890796,58890139,58888962,58888472,58887932,58886890,58885902,58883591,58883032,58880901,58879105,58877852,58876603,58874573,58874330,58872816	Gene ID= ENSG00000139263.11 TPM= 1.93 Transcript Type= protein_coding
chr12	62260357	62406119	62260357	62406119	+	ENST00000280377.9@USP15	ENST00000280377.9	protein_coding	62260357,62294179,62302790,62314790,62321464,62325872,62349221,62355331,62381490,62383840,62384078,62389431,62389605,62389797,62390864,62391157,62391816,62392272,62393053,62396295,62401187,62404193	62260503,62294306,62302920,62314916,62321609,62325933,62349307,62355475,62381663,62383998,62384302,62389514,62389699,62389988,62390979,62391429,62391886,62392387,62393202,62396398,62401275,62406119	Gene ID= ENSG00000135655.15 TPM= 24.13 Transcript Type= protein_coding
chr12	62260338	62416389	62260338	62416389	+	ENST00000353364.7@USP15	ENST00000353364.7	protein_coding	62260338,62294179,62302790,62314790,62321464,62325872,62355331,62381490,62383840,62384078,62389431,62389605,62389797,62390864,62391157,62391816,62392272,62393053,62396295,62401187,62404193	62260503,62294306,62302920,62314916,62321609,62325933,62355475,62381663,62383998,62384302,62389514,62389699,62389988,62390979,62391429,62391886,62392387,62393202,62396398,62401275,62416389	Gene ID= ENSG00000135655.15 TPM= 8.69 Transcript Type= protein_coding
chr12	62466799	62557100	62466799	62557100	+	transcript2739.chr12.nic@MON2	transcript2739.chr12.nic	protein_coding	62466799,62484170,62493915,62495016,62498919,62500783,62501573,62508286,62524515,62525084,62525949,62532438,62534845,62535525,62537151,62537602,62538096,62538252,62538415,62543097,62544898,62546897,62549668,62552881,62555994	62467318,62484233,62494042,62495147,62499048,62500880,62501698,62508480,62524639,62525220,62526102,62532670,62534926,62535709,62537263,62537706,62538176,62538325,62538505,62543198,62545008,62547072,62549830,62553174,62557100	Gene ID= ENSG00000061987.15 TPM= 1.93 Transcript Type= NA
chr12	62466799	62508804	62466799	62508804	+	transcript2743.chr12.nic@MON2	transcript2743.chr12.nic	protein_coding	62466799,62484170,62493915,62495016,62498919,62500783,62501573,62508286	62467318,62484233,62494042,62495147,62499048,62500880,62501698,62508804	Gene ID= ENSG00000061987.15 TPM= 1.93 Transcript Type= NA
chr12	62466799	62502421	62466799	62502421	+	transcript2744.chr12.nic@MON2	transcript2744.chr12.nic	protein_coding	62466799,62484170,62493915,62495016,62498919,62500783,62501573	62467318,62484233,62494042,62495147,62499048,62500880,62502421	Gene ID= ENSG00000061987.15 TPM= 1.93 Transcript Type= NA
chr12	62965325	62965969	62965325	62965969	+	ENST00000484568.1@AC078814.1	ENST00000484568.1	processed_pseudogene	62965325	62965969	Gene ID= ENSG00000139239.7 TPM= 1.93 Transcript Type= processed_pseudogene
chr12	63779803	63809520	63779803	63809520	+	ENST00000261234.10@TMEM5	ENST00000261234.10	protein_coding	63779803,63781019,63784970,63802091,63805234,63808675	63780129,63781174,63785072,63802405,63805404,63809520	Gene ID= ENSG00000118600.11 TPM= 5.79 Transcript Type= protein_coding
chr12	63780126	63809558	63780126	63809558	+	ENST00000537373.5@TMEM5	ENST00000537373.5	protein_coding	63780126,63781019,63784970,63802091,63805234,63808675	63780462,63781174,63785072,63802405,63805404,63809558	Gene ID= ENSG00000118600.11 TPM= 2.9 Transcript Type= protein_coding
chr12	63844068	64042948	63844068	64042948	+	transcript2756.chr12.nic@SRGAP1	transcript2756.chr12.nic	protein_coding	63844068,63983947,63989910,64016950,64042790	63844883,63984142,63990072,64017012,64042948	Gene ID= ENSG00000196935.8 TPM= 1.93 Transcript Type= NA
chr12	64191083	64222291	64191083	64222291	-	ENST00000398055.7@C12orf66	ENST00000398055.7	protein_coding	64222003,64215678,64191083	64222291,64215963,64194658	Gene ID= ENSG00000174206.12 TPM= 7.72 Transcript Type= protein_coding
chr12	64221699	64222272	64221699	64222272	-	ENST00000615991.1@C12orf66	ENST00000615991.1	protein_coding	64221699	64222272	Gene ID= ENSG00000174206.12 TPM= 1.93 Transcript Type= processed_transcript
chr12	64404462	64448679	64404462	64448679	+	transcript2763.chr12.nnic@XPOT	transcript2763.chr12.nnic	protein_coding	64404462,64409962,64414907,64416698,64418046,64418876,64420070,64420353,64421235,64423005,64423182,64424599,64425038,64425338,64425815,64428051,64429468,64430049,64431538,64433414,64434507,64434794,64435627,64439244,64445075,64448105	64404804,64410095,64414989,64416754,64418115,64419094,64420254,64420521,64421471,64423043,64423244,64424723,64425138,64425457,64425909,64428120,64429585,64430287,64431823,64433603,64434623,64434909,64435674,64439315,64445131,64448679	Gene ID= ENSG00000184575.11 TPM= 6.44 Transcript Type= NA
chr12	64404330	64448679	64404330	64448679	+	transcript2765.chr12.nic@XPOT	transcript2765.chr12.nic	protein_coding	64404330,64409962,64414907,64416698,64418046,64418876,64420070,64420353,64421235,64423005,64423182,64424599,64425038,64425338,64425815,64428051,64430049,64431538,64433414,64434507,64434794,64435627,64439244,64445075,64448105	64404804,64410095,64414989,64416754,64418115,64419094,64420254,64420521,64421471,64423043,64423244,64424723,64425138,64425457,64425909,64428120,64430287,64431823,64433603,64434623,64434909,64435674,64439315,64445131,64448679	Gene ID= ENSG00000184575.11 TPM= 9.33 Transcript Type= NA
chr12	64404451	64448679	64404451	64448679	+	transcript2770.chr12.nic@XPOT	transcript2770.chr12.nic	protein_coding	64404451,64409962,64414907,64416698,64418046,64418876,64420070,64420353,64421235,64423005,64423182,64424599,64425038,64425815,64428051,64430049,64431538,64433414,64434507,64434794,64435627,64439244,64445075,64448105	64404804,64410095,64414989,64416754,64418115,64419094,64420254,64420521,64421471,64423043,64423244,64424723,64425457,64425909,64428120,64430287,64431823,64433603,64434623,64434909,64435674,64439315,64445131,64448679	Gene ID= ENSG00000184575.11 TPM= 7.4 Transcript Type= NA
chr12	64451880	64502108	64451880	64502108	+	ENST00000331710.9@TBK1	ENST00000331710.9	protein_coding	64451880,64455840,64460189,64464334,64466901,64474230,64480012,64481842,64484303,64485455,64485926,64488487,64490041,64495483,64495699,64496367,64496949,64497163,64497648,64497968,64501330	64452187,64455957,64460329,64464463,64467082,64474390,64480122,64482021,64484499,64485513,64486017,64488588,64490119,64495604,64495775,64496406,64497050,64497259,64497754,64498039,64502108	Gene ID= ENSG00000183735.9 TPM= 43.44 Transcript Type= protein_coding
chr12	64610513	64697567	64610513	64697567	+	ENST00000542104.5@RASSF3	ENST00000542104.5	protein_coding	64610513,64684787,64688216,64691470,64694763	64610743,64684894,64688453,64691579,64697567	Gene ID= ENSG00000153179.12 TPM= 4.83 Transcript Type= protein_coding
chr12	64713449	64759447	64713449	64759447	-	ENST00000258145.7@GNS	ENST00000258145.7	protein_coding	64759085,64752698,64747712,64745659,64744809,64743141,64740606,64739381,64737004,64728956,64723006,64721595,64720022,64713449	64759447,64752757,64747918,64745724,64744907,64743308,64740688,64739499,64737107,64729057,64723113,64721705,64720182,64716819	Gene ID= ENSG00000135677.10 TPM= 45.37 Transcript Type= protein_coding
chr12	65169570	65248327	65169570	65248327	+	transcript2789.chr12.nnic@LEMD3	transcript2789.chr12.nnic	protein_coding	65169570,65193064,65210926,65215977,65218552,65238502,65238669,65239929,65240136,65240909,65243388,65245669,65245861,65246162	65171118,65193200,65210963,65216043,65218619,65238581,65238814,65240030,65240238,65241087,65243469,65245774,65245939,65248327	Gene ID= ENSG00000174106.2 TPM= 1.93 Transcript Type= NA
chr12	65169540	65239562	65169540	65239562	+	transcript2795.chr12.nic@LEMD3	transcript2795.chr12.nic	protein_coding	65169540,65210926,65215977,65218552,65238502	65171118,65210963,65216043,65218619,65239562	Gene ID= ENSG00000174106.2 TPM= 1.93 Transcript Type= NA
chr12	65169571	65248327	65169571	65248327	+	ENST00000308330.2@LEMD3	ENST00000308330.2	protein_coding	65169571,65210926,65215977,65218552,65238502,65238669,65239929,65240136,65240909,65243388,65245669,65245861,65246162	65171118,65210963,65216043,65218619,65238581,65238814,65240030,65240238,65241087,65243469,65245774,65245939,65248327	Gene ID= ENSG00000174106.2 TPM= 24.13 Transcript Type= protein_coding
chr12	65278643	65466906	65278643	65466906	+	ENST00000355192.7@MSRB3	ENST00000355192.7	protein_coding	65278643,65326826,65328526,65368998,65453728,65463155	65278865,65326934,65328603,65369026,65453825,65466906	Gene ID= ENSG00000174099.10 TPM= 16.41 Transcript Type= protein_coding
chr12	65278643	65466907	65278643	65466907	+	ENST00000308259.9@MSRB3	ENST00000308259.9	protein_coding	65278643,65308529,65326826,65328526,65368998,65453728,65463155	65278865,65308655,65326934,65328603,65369026,65453825,65466907	Gene ID= ENSG00000174099.10 TPM= 44.4 Transcript Type= protein_coding
chr12	66116555	66130768	66116555	66130768	-	ENST00000266604.6@LLPH	ENST00000266604.6	protein_coding	66130705,66128896,66116555	66130768,66129113,66124018	Gene ID= ENSG00000139233.6 TPM= 20.27 Transcript Type= protein_coding
chr12	66135846	66170072	66135846	66170072	-	ENST00000358230.7@TMBIM4	ENST00000358230.7	protein_coding	66169855,66153340,66152271,66147908,66145841,66138724,66135846	66170072,66153448,66152376,66147941,66145958,66138769,66138166	Gene ID= ENSG00000155957.17 TPM= 5.79 Transcript Type= protein_coding
chr12	66137920	66169999	66137920	66169999	-	ENST00000542724.5@TMBIM4	ENST00000542724.5	protein_coding	66169855,66153340,66152271,66147908,66145841,66138724,66137920	66169999,66153448,66152376,66147941,66145958,66138734,66138166	Gene ID= ENSG00000155957.17 TPM= 1.93 Transcript Type= protein_coding
chr12	67269281	67319951	67269281	67319951	+	ENST00000545606.5@CAND1	ENST00000545606.5	protein_coding	67269281,67281910,67292622,67295033,67297407,67297748,67298950,67302323,67304605,67305104,67307397,67309901,67310152,67311693,67312606	67269785,67282053,67292776,67295156,67297663,67297853,67299095,67302615,67304746,67306597,67307492,67310070,67310316,67311800,67319951	Gene ID= ENSG00000111530.12 TPM= 15.44 Transcript Type= protein_coding
chr12	67648778	67658909	67648778	67658909	+	ENST00000393555.3@DYRK2	ENST00000393555.3	protein_coding	67648778,67657106	67649182,67658909	Gene ID= ENSG00000127334.10 TPM= 3.86 Transcript Type= protein_coding
chr12	68610839	68671901	68610839	68671901	+	ENST00000250559.13@RAP1B	ENST00000250559.13	protein_coding	68610839,68648699,68650400,68651995,68654112,68656306,68657101,68659280	68611043,68648781,68650468,68652051,68654252,68656449,68657217,68671901	Gene ID= ENSG00000127314.17 TPM= 6.76 Transcript Type= protein_coding
chr12	68610858	68660522	68610858	68660522	+	ENST00000393436.9@RAP1B	ENST00000393436.9	protein_coding	68610858,68648699,68650400,68651995,68654112,68656306,68657101,68659280	68611052,68648781,68650468,68652051,68654252,68656449,68657217,68660522	Gene ID= ENSG00000127314.17 TPM= 16.41 Transcript Type= protein_coding
chr12	68686734	68745809	68686734	68745809	+	ENST00000229179.8@NUP107	ENST00000229179.8	protein_coding	68686734,68688962,68689533,68690631,68691968,68696819,68700726,68702736,68709238,68710005,68713730,68715627,68719341,68719578,68721118,68721841,68722104,68725727,68726499,68727351,68731110,68731607,68732637,68733452,68734708,68735231,68741813,68742355	68687073,68689053,68689619,68690746,68692112,68696922,68700853,68702784,68709309,68710093,68713808,68715740,68719431,68719654,68721177,68721986,68722152,68725796,68726617,68727389,68731260,68731719,68732739,68733612,68734833,68735344,68741980,68745809	Gene ID= ENSG00000111581.9 TPM= 1.93 Transcript Type= protein_coding
chr12	68686958	68714267	68686958	68714267	+	transcript2883.chr12.nic@NUP107	transcript2883.chr12.nic	protein_coding	68686958,68688962,68689533,68690631,68691968,68696819,68700726,68702736,68709238,68710005,68713730	68687073,68689053,68689619,68690746,68692112,68696922,68700853,68702784,68709309,68710093,68714267	Gene ID= ENSG00000111581.9 TPM= 2.9 Transcript Type= NA
chr12	68746407	68760196	68746407	68760196	+	transcript2887.chr12.nic@SLC35E3	transcript2887.chr12.nic	protein_coding	68746407,68747930,68752032,68759157,68760040	68746779,68748040,68752190,68759239,68760196	Gene ID= ENSG00000175782.9 TPM= 1.93 Transcript Type= NA
chr12	68746106	68781467	68746106	68781467	+	ENST00000398004.3@SLC35E3	ENST00000398004.3	protein_coding	68746106,68747930,68752032,68759157,68764704	68746779,68748040,68752190,68759239,68781467	Gene ID= ENSG00000175782.9 TPM= 1.93 Transcript Type= protein_coding
chr12	68840837	68842924	68840837	68842924	-	transcript2903.chr12.nnic@NA	transcript2903.chr12.nnic	NA	68840837	68842924	Gene ID= novel_gene_chr12_2904 TPM= 65.64 Transcript Type= NA
chr12	68851175	68933199	68851175	68933199	-	ENST00000551568.5@CPM	ENST00000551568.5	protein_coding	68933142,68932678,68885792,68871784,68870215,68869325,68866896,68858923,68851175	68933199,68932840,68885889,68871956,68870399,68869495,68867048,68859071,68856679	Gene ID= ENSG00000135678.11 TPM= 5.79 Transcript Type= protein_coding
chr12	69239537	69274358	69239537	69274358	+	ENST00000435070.6@CPSF6	ENST00000435070.6	protein_coding	69239537,69251129,69253051,69256697,69257732,69258590,69259428,69260044,69262373,69269512	69239706,69251338,69253154,69256842,69257905,69259094,69259543,69260197,69262562,69274358	Gene ID= ENSG00000111605.16 TPM= 1.93 Transcript Type= protein_coding
chr12	69239616	69269939	69239616	69269939	+	ENST00000266679.8@CPSF6	ENST00000266679.8	protein_coding	69239616,69251129,69253051,69256697,69257732,69258035,69258590,69259428,69260044,69262373,69269512	69239706,69251338,69253154,69256842,69257905,69258145,69259094,69259543,69260197,69262562,69269939	Gene ID= ENSG00000111605.16 TPM= 1.93 Transcript Type= protein_coding
chr12	69348341	69354234	69348341	69354234	+	ENST00000261267.6@LYZ	ENST00000261267.6	protein_coding	69348341,69350108,69352220,69353153	69348544,69350272,69352298,69354234	Gene ID= ENSG00000090382.6 TPM= 2.9 Transcript Type= protein_coding
chr12	69359703	69390796	69359703	69390796	+	ENST00000247843.6@YEATS4	ENST00000247843.6	protein_coding	69359703,69362788,69365633,69365790,69370706,69370888,69390147	69360023,69362907,69365699,69365884,69370798,69370975,69390796	Gene ID= ENSG00000127337.6 TPM= 20.27 Transcript Type= protein_coding
chr12	69585334	69601570	69585334	69601570	+	ENST00000299300.10@CCT2	ENST00000299300.10	protein_coding	69585334,69586270,69586753,69587505,69587930,69588150,69589485,69592059,69592976,69593510,69597156,69597638,69597968,69598322,69599863,69601295	69585524,69586344,69586818,69587616,69588006,69588262,69589687,69592159,69593103,69593613,69597275,69597766,69598071,69598421,69600004,69601570	Gene ID= ENSG00000166226.12 TPM= 167 Transcript Type= protein_coding
chr12	69653609	69699416	69653609	69699416	-	ENST00000330891.9@BEST3	ENST00000330891.9	protein_coding	69699205,69697647,69694370,69693674,69678739,69677180,69676916,69672885,69671428,69653609	69699416,69697813,69694464,69693907,69678893,69677257,69677068,69672965,69671579,69655813	Gene ID= ENSG00000127325.18 TPM= 2.41 Transcript Type= protein_coding
chr12	69651881	69699376	69651881	69699376	-	transcript2944.chr12.nic@BEST3	transcript2944.chr12.nic	protein_coding	69699205,69694370,69693674,69678739,69677180,69676916,69672885,69671428,69651881	69699376,69694464,69693907,69678893,69677257,69677068,69672965,69671579,69655813	Gene ID= ENSG00000127325.18 TPM= 6.76 Transcript Type= NA
chr12	69684362	69699315	69684362	69699315	-	transcript2959.chr12.nnic@BEST3	transcript2959.chr12.nnic	protein_coding	69699205,69697647,69694370,69693674,69689070,69684362	69699315,69697813,69694464,69693907,69689173,69687459	Gene ID= ENSG00000127325.18 TPM= 17.86 Transcript Type= NA
chr12	69683239	69699371	69683239	69699371	-	transcript2966.chr12.nic@BEST3	transcript2966.chr12.nic	protein_coding	69699205,69697647,69694370,69693674,69683239	69699371,69697813,69694464,69693907,69684608	Gene ID= ENSG00000127325.18 TPM= 9.17 Transcript Type= NA
chr12	69683244	69699371	69683244	69699371	-	transcript2967.chr12.nic@BEST3	transcript2967.chr12.nic	protein_coding	69699205,69697647,69694370,69693674,69683244	69699371,69697813,69694464,69693907,69687459	Gene ID= ENSG00000127325.18 TPM= 21.24 Transcript Type= NA
chr12	69685812	69699324	69685812	69699324	-	transcript2980.chr12.nnic@BEST3	transcript2980.chr12.nnic	protein_coding	69699205,69694370,69693674,69689070,69685812	69699324,69694464,69693907,69689173,69687459	Gene ID= ENSG00000127325.18 TPM= 21.24 Transcript Type= NA
chr12	69684408	69699395	69684408	69699395	-	ENST00000551160.5@BEST3	ENST00000551160.5	protein_coding	69699205,69694370,69693674,69684408	69699395,69694464,69693907,69684608	Gene ID= ENSG00000127325.18 TPM= 2.9 Transcript Type= protein_coding
chr12	69683244	69699461	69683244	69699461	-	transcript3003.chr12.nic@BEST3	transcript3003.chr12.nic	protein_coding	69699205,69693674,69683244	69699461,69693907,69687459	Gene ID= ENSG00000127325.18 TPM= 23.17 Transcript Type= NA
chr12	69683239	69699476	69683239	69699476	-	ENST00000266661.8@BEST3	ENST00000266661.8	protein_coding	69699205,69693674,69683239	69699476,69693907,69684608	Gene ID= ENSG00000127325.18 TPM= 4.34 Transcript Type= protein_coding
chr12	69738681	69817377	69738681	69817377	+	ENST00000247833.11@RAB3IP	ENST00000247833.11	protein_coding	69738681,69755384,69756405,69784720,69794437,69795141,69800209,69801609,69812778,69812964,69815364	69739031,69755659,69756663,69784815,69794514,69795344,69800337,69801721,69812877,69813033,69817377	Gene ID= ENSG00000127328.21 TPM= 4.83 Transcript Type= protein_coding
chr12	70243433	70353938	70243433	70353938	+	transcript3020.chr12.nic@CNOT2	transcript3020.chr12.nic	protein_coding	70243433,70278132,70294237,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70294294,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70353938	Gene ID= ENSG00000111596.11 TPM= 4.83 Transcript Type= NA
chr12	70242994	70354992	70242994	70354992	+	ENST00000229195.7@CNOT2	ENST00000229195.7	protein_coding	70242994,70278132,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70354992	Gene ID= ENSG00000111596.11 TPM= 48.27 Transcript Type= protein_coding
chr12	70243431	70353938	70243431	70353938	+	transcript3029.chr12.nic@CNOT2	transcript3029.chr12.nic	protein_coding	70243431,70278132,70310895,70319298,70329423,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70311017,70319364,70329570,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70353938	Gene ID= ENSG00000111596.11 TPM= 3.86 Transcript Type= NA
chr12	70243433	70353938	70243433	70353938	+	transcript3033.chr12.nic@CNOT2	transcript3033.chr12.nic	protein_coding	70243433,70278132,70310895,70319298,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70311017,70319364,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70353938	Gene ID= ENSG00000111596.11 TPM= 8.69 Transcript Type= NA
chr12	70243436	70346624	70243436	70346624	+	transcript3035.chr12.nic@CNOT2	transcript3035.chr12.nic	protein_coding	70243436,70278132,70294237,70310895,70319298,70335438,70337389,70338443,70338666,70342107,70342258,70344128	70243480,70278274,70294294,70311017,70319364,70335563,70337513,70338563,70338822,70342168,70342307,70346624	Gene ID= ENSG00000111596.11 TPM= 1.93 Transcript Type= NA
chr12	71125100	71158099	71125100	71158099	-	ENST00000247829.7@TSPAN8	ENST00000247829.7	protein_coding	71157930,71157619,71144151,71139711,71138156,71137953,71132693,71129331,71125100	71158099,71157787,71144213,71139848,71138230,71138060,71132824,71129414,71125387	Gene ID= ENSG00000127324.8 TPM= 7.72 Transcript Type= protein_coding
chr12	71439798	71584392	71439798	71584392	+	transcript3048.chr12.nic@LGR5	transcript3048.chr12.nic	protein_coding	71439798,71504614,71524406,71535115,71553073,71556619,71559586,71561781,71566404,71566632,71566841,71571514,71572850,71577925,71578804,71580278,71582456,71583647	71440292,71504685,71524477,71535186,71553288,71556690,71559654,71561852,71566475,71566700,71567315,71571579,71572921,71577996,71578929,71580423,71582539,71584392	Gene ID= ENSG00000139292.12 TPM= 2.9 Transcript Type= NA
chr12	71663009	71680639	71663009	71680639	+	ENST00000308086.2@THAP2	ENST00000308086.2	protein_coding	71663009,71674203,71676689	71664580,71674398,71680639	Gene ID= ENSG00000173451.6 TPM= 2.9 Transcript Type= protein_coding
chr12	71686076	71704056	71686076	71704056	+	transcript3056.chr12.nic@TMEM19	transcript3056.chr12.nic	protein_coding	71686076,71689591,71696436,71697280,71698900,71700832,71703977	71686810,71689704,71696573,71697534,71699109,71700878,71704056	Gene ID= ENSG00000139291.13 TPM= 1.93 Transcript Type= NA
chr12	71686076	71704056	71686076	71704056	+	transcript3057.chr12.nic@TMEM19	transcript3057.chr12.nic	protein_coding	71686076,71689591,71696436,71697280,71698900,71700832,71703977	71686810,71689704,71696573,71697534,71699109,71701025,71704056	Gene ID= ENSG00000139291.13 TPM= 1.93 Transcript Type= NA
chr12	71686076	71703225	71686076	71703225	+	transcript3058.chr12.nnic@TMEM19	transcript3058.chr12.nnic	protein_coding	71686076,71689591,71696436,71697280,71698900,71700832,71702967	71686810,71689704,71696573,71697534,71699109,71702496,71703225	Gene ID= ENSG00000139291.13 TPM= 1.93 Transcript Type= NA
chr12	71786282	71790759	71786282	71790759	+	transcript3074.chr12.nnic@NA	transcript3074.chr12.nnic	NA	71786282	71790759	Gene ID= novel_gene_chr12_3075 TPM= 2.9 Transcript Type= NA
chr12	71839718	71927248	71839718	71927248	+	ENST00000550746.5@TBC1D15	ENST00000550746.5	protein_coding	71839718,71872070,71872929,71880469,71884811,71893222,71894325,71894686,71895947,71896677,71897847,71907022,71913826,71917698,71918451,71920731,71921368,71922983	71839811,71872168,71873003,71880607,71885021,71893324,71894375,71894883,71896075,71896780,71897941,71907138,71913926,71917797,71918548,71920847,71921454,71927248	Gene ID= ENSG00000121749.15 TPM= 1.93 Transcript Type= protein_coding
chr12	71839759	71923645	71839759	71923645	+	ENST00000485960.6@TBC1D15	ENST00000485960.6	protein_coding	71839759,71872070,71872929,71880469,71884811,71893222,71894686,71895947,71896677,71897847,71907022,71913826,71917698,71918451,71920731,71921368,71922983	71839811,71872168,71873003,71880607,71885021,71893324,71894883,71896075,71896780,71897941,71907138,71913926,71917797,71918548,71920847,71921454,71923645	Gene ID= ENSG00000121749.15 TPM= 4.83 Transcript Type= protein_coding
chr12	74537774	74541451	74537774	74541451	+	transcript3084.chr12.nnic@NA	transcript3084.chr12.nnic	NA	74537774	74541451	Gene ID= novel_gene_chr12_3085 TPM= 87.84 Transcript Type= NA
chr12	75480680	75503853	75480680	75503853	+	ENST00000266659.7@GLIPR1	ENST00000266659.7	protein_coding	75480680,75481834,75490406,75495577,75498694,75498824	75481054,75482079,75490518,75495662,75498720,75503853	Gene ID= ENSG00000139278.9 TPM= 1.93 Transcript Type= protein_coding
chr12	75503954	75511638	75503954	75511638	-	transcript3103.chr12.nic@KRR1	transcript3103.chr12.nic	protein_coding	75511513,75508274,75506782,75506484,75506316,75505198,75503954	75511638,75508446,75506916,75506609,75506399,75505254,75504074	Gene ID= ENSG00000111615.13 TPM= 3.38 Transcript Type= NA
chr12	75490861	75511621	75490861	75511621	-	ENST00000229214.8@KRR1	ENST00000229214.8	protein_coding	75511513,75508274,75506782,75506484,75506316,75505198,75503904,75501923,75501723,75490861	75511621,75508446,75506916,75506609,75506399,75505254,75504074,75502000,75501816,75499951	Gene ID= ENSG00000111615.13 TPM= 6.27 Transcript Type= protein_coding
chr12	76044902	76084958	76044902	76084958	-	ENST00000261182.12@NAP1L1	ENST00000261182.12	protein_coding	76084567,76074203,76068909,76067371,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049200,76048393,76044902	76084958,76074239,76068994,76067473,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049250,76048464,76047718	Gene ID= ENSG00000187109.13 TPM= 3.86 Transcript Type= protein_coding
chr12	76047428	76084685	76047428	76084685	-	transcript3116.chr12.nic@NAP1L1	transcript3116.chr12.nic	protein_coding	76084567,76074203,76068909,76067371,76060138,76059798,76057744,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049200,76047428	76084685,76074239,76068994,76067473,76060279,76059878,76057776,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049250,76048464	Gene ID= ENSG00000187109.13 TPM= 5.79 Transcript Type= NA
chr12	76036587	76085033	76036587	76085033	-	ENST00000618691.4@NAP1L1	ENST00000618691.4	protein_coding	76084567,76074203,76068909,76067371,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049200,76036587	76085033,76074239,76068994,76067473,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049250,76048464	Gene ID= ENSG00000187109.13 TPM= 2.9 Transcript Type= protein_coding
chr12	76047428	76084685	76047428	76084685	-	transcript3129.chr12.nic@NAP1L1	transcript3129.chr12.nic	protein_coding	76084567,76074203,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049200,76048393,76047428	76084685,76074239,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049250,76048464,76047718	Gene ID= ENSG00000187109.13 TPM= 2.9 Transcript Type= NA
chr12	76049562	76084695	76049562	76084695	-	transcript3149.chr12.nic@NAP1L1	transcript3149.chr12.nic	protein_coding	76084567,76074203,76060138,76059798,76057744,76056033,76055019,76053770,76053205,76053091,76050531,76049562	76084695,76074239,76060279,76059878,76057776,76056161,76055090,76053909,76053350,76053110,76050653,76049785	Gene ID= ENSG00000187109.13 TPM= 4.83 Transcript Type= NA
chr12	76049562	76084686	76049562	76084686	-	transcript3153.chr12.nic@NAP1L1	transcript3153.chr12.nic	protein_coding	76084567,76074203,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049562	76084686,76074239,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785	Gene ID= ENSG00000187109.13 TPM= 9.65 Transcript Type= NA
chr12	76344474	76348442	76344474	76348442	-	ENST00000393262.3@BBS10	ENST00000393262.3	protein_coding	76348162,76344474	76348442,76347787	Gene ID= ENSG00000179941.6 TPM= 4.83 Transcript Type= protein_coding
chr12	76347403	76348437	76347403	76348437	-	transcript3167.chr12.nnic@NA	transcript3167.chr12.nnic	NA	76347403	76348437	Gene ID= novel_gene_chr12_3168 TPM= 1.93 Transcript Type= NA
chr12	76356705	76559772	76356705	76559772	-	transcript3173.chr12.nic@OSBPL8	transcript3173.chr12.nic	protein_coding	76559397,76487510,76450851,76410564,76402689,76399873,76397694,76394645,76392581,76390420,76389645,76386579,76386168,76384254,76378452,76375273,76373344,76371448,76369637,76369214,76358706,76356705	76559772,76487618,76450988,76410634,76402766,76399974,76397897,76394729,76392752,76390657,76389829,76386660,76386266,76384350,76378550,76375370,76373433,76371584,76369822,76369301,76358811,76356728	Gene ID= ENSG00000091039.16 TPM= 2.9 Transcript Type= NA
chr12	76355836	76559809	76355836	76559809	-	ENST00000393250.8@OSBPL8	ENST00000393250.8	protein_coding	76559397,76487510,76450851,76410564,76402689,76399873,76397694,76394645,76392581,76390420,76389645,76386579,76386168,76384254,76378452,76375273,76373344,76371448,76369637,76369214,76358706,76356626,76355836	76559809,76487618,76450979,76410634,76402766,76399974,76397897,76394729,76392752,76390657,76389829,76386660,76386266,76384350,76378550,76375370,76373433,76371584,76369822,76369301,76358811,76356728,76356021	Gene ID= ENSG00000091039.16 TPM= 3.86 Transcript Type= protein_coding
chr12	76763588	76853696	76763588	76853696	+	ENST00000426126.6@ZDHHC17	ENST00000426126.6	protein_coding	76763588,76797434,76805317,76809043,76809713,76815146,76815857,76822406,76826908,76828390,76841982,76842919,76845709,76846596,76848233,76849376,76850847	76764329,76797537,76805439,76809120,76809857,76815210,76816019,76822531,76827050,76828490,76842106,76842981,76845802,76846679,76848390,76849470,76853696	Gene ID= ENSG00000186908.14 TPM= 5.79 Transcript Type= protein_coding
chr12	76858715	76879060	76858715	76879060	-	ENST00000311083.9@CSRP2	ENST00000311083.9	protein_coding	76878938,76866149,76863176,76860284,76859547,76858715	76879060,76866261,76863344,76860413,76859640,76859028	Gene ID= ENSG00000175183.9 TPM= 5.79 Transcript Type= protein_coding
chr12	79797330	79935147	79797330	79935147	-	transcript3182.chr12.nnic@PPP1R12A	transcript3182.chr12.nnic	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79810395,79809795,79808483,79807226,79806166,79805592,79798494,79797330	79935147,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810511,79810010,79808577,79807330,79806297,79805768,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 2.17 Transcript Type= NA
chr12	79797330	79935211	79797330	79935211	-	transcript3183.chr12.nnic@PPP1R12A	transcript3183.chr12.nnic	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79810395,79809795,79808483,79807226,79806166,79805592,79798494,79797330	79935211,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810511,79810010,79808577,79807330,79806333,79805768,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 18.58 Transcript Type= NA
chr12	79797330	79935160	79797330	79935160	-	transcript3185.chr12.nic@PPP1R12A	transcript3185.chr12.nic	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79809795,79808483,79807226,79806166,79805592,79798494,79797330	79935160,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810010,79808577,79807330,79806333,79805768,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 10.86 Transcript Type= NA
chr12	79797330	79935211	79797330	79935211	-	transcript3186.chr12.nnic@PPP1R12A	transcript3186.chr12.nnic	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79810395,79809795,79808483,79807226,79806166,79798494,79797330	79935211,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810511,79810010,79808577,79807330,79806333,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 20.51 Transcript Type= NA
chr12	79870101	79935145	79870101	79935145	-	transcript3191.chr12.nic@PPP1R12A	transcript3191.chr12.nic	protein_coding	79934695,79870101	79935145,79872938	Gene ID= ENSG00000058272.16 TPM= 1.93 Transcript Type= NA
chr12	80707454	80709474	80707454	80709474	+	transcript3204.chr12.nic@MYF6	transcript3204.chr12.nic	protein_coding	80707454,80708524	80708238,80709474	Gene ID= ENSG00000111046.3 TPM= 13.51 Transcript Type= NA
chr12	80707632	80709566	80707632	80709566	+	transcript3205.chr12.nic@MYF6	transcript3205.chr12.nic	protein_coding	80707632,80708524	80708238,80709566	Gene ID= ENSG00000111046.3 TPM= 8.69 Transcript Type= NA
chr12	80716912	80719673	80716912	80719673	+	ENST00000228644.3@MYF5	ENST00000228644.3	protein_coding	80716912,80718358,80718861	80717564,80718433,80719673	Gene ID= ENSG00000111049.3 TPM= 1.93 Transcript Type= protein_coding
chr12	81077211	81261205	81077211	81261205	+	ENST00000548058.5@ACSS3	ENST00000548058.5	protein_coding	81077211,81109560,81134816,81139131,81143107,81151844,81152001,81174788,81199341,81216901,81220013,81231057,81233349,81253307,81253495,81254857	81078431,81109704,81135004,81139265,81143247,81151924,81152096,81174939,81199444,81216996,81220076,81231138,81233471,81253406,81253670,81261205	Gene ID= ENSG00000111058.7 TPM= 1.93 Transcript Type= protein_coding
chr12	82352306	82358788	82352306	82358788	-	ENST00000256151.7@CCDC59	ENST00000256151.7	protein_coding	82358223,82356960,82354495,82352306	82358788,82357269,82354594,82353312	Gene ID= ENSG00000133773.11 TPM= 10.62 Transcript Type= protein_coding
chr12	82354565	82358805	82354565	82358805	-	transcript3227.chr12.nic@CCDC59	transcript3227.chr12.nic	protein_coding	82358679,82356960,82354565	82358805,82357269,82354594	Gene ID= ENSG00000133773.11 TPM= 3.86 Transcript Type= NA
chr12	82352847	82358786	82352847	82358786	-	ENST00000548126.1@CCDC59	ENST00000548126.1	protein_coding	82358679,82356960,82354495,82352847	82358786,82357269,82354594,82353312	Gene ID= ENSG00000133773.11 TPM= 2.9 Transcript Type= processed_transcript
chr12	88035446	88050160	88035446	88050160	+	ENST00000356891.3@C12orf29	ENST00000356891.3	protein_coding	88035446,88040148,88042825,88043599,88045582,88046807,88048234	88035738,88040265,88042920,88043715,88045779,88046976,88050160	Gene ID= ENSG00000133641.17 TPM= 27.99 Transcript Type= protein_coding
chr12	88035505	88050158	88035505	88050158	+	ENST00000550333.5@C12orf29	ENST00000550333.5	protein_coding	88035505,88042825,88043599,88045582,88046807,88048234	88035738,88042920,88043715,88045779,88046976,88050158	Gene ID= ENSG00000133641.17 TPM= 7.72 Transcript Type= nonsense_mediated_decay
chr12	88135852	88142093	88135852	88142093	-	transcript3240.chr12.nic@CEP290	transcript3240.chr12.nic	protein_coding	88141900,88141206,88140956,88139495,88139145,88135852	88142093,88141334,88141033,88139564,88139191,88136786	Gene ID= ENSG00000198707.14 TPM= 1.93 Transcript Type= NA
chr12	89347232	89353271	89347232	89353271	-	ENST00000279488.7@DUSP6	ENST00000279488.7	protein_coding	89351640,89350588,89347232	89353271,89351025,89349561	Gene ID= ENSG00000139318.7 TPM= 2.9 Transcript Type= protein_coding
chr12	89419718	89525615	89419718	89525615	-	ENST00000393179.8@POC1B	ENST00000393179.8	protein_coding	89525120,89491936,89472168,89471614,89470361,89467617,89466770,89459638,89425161,89419718	89525615,89492115,89472275,89471729,89470494,89467685,89466922,89459718,89425379,89421257	Gene ID= ENSG00000139323.13 TPM= 1.93 Transcript Type= protein_coding
chr12	89630528	89709337	89630528	89709337	-	transcript3264.chr12.nic@ATP2B1	transcript3264.chr12.nic	protein_coding	89708596,89655679,89642158,89634997,89634778,89630528	89709337,89656107,89642355,89635251,89634903,89630645	Gene ID= ENSG00000070961.15 TPM= 16.41 Transcript Type= NA
chr12	89630528	89709638	89630528	89709638	-	transcript3265.chr12.nic@ATP2B1	transcript3265.chr12.nic	protein_coding	89709219,89655679,89642158,89634997,89634778,89630528	89709638,89656107,89642355,89635251,89634903,89630645	Gene ID= ENSG00000070961.15 TPM= 23.17 Transcript Type= NA
chr12	89708962	89710594	89708962	89710594	+	transcript3267.chr12.nnic@NA	transcript3267.chr12.nnic	NA	89708962	89710594	Gene ID= novel_gene_chr12_3268 TPM= 1.93 Transcript Type= NA
chr12	91140484	91183123	91140484	91183123	-	ENST00000052754.9@DCN	ENST00000052754.9	protein_coding	91182655,91178342,91164605,91158296,91157075,91153096,91151654,91140484	91183123,91178585,91164717,91158509,91157188,91153189,91151792,91146252	Gene ID= ENSG00000011465.16 TPM= 42.47 Transcript Type= protein_coding
chr12	91145736	91182824	91145736	91182824	-	ENST00000552962.5@DCN	ENST00000552962.5	protein_coding	91182655,91179362,91178342,91164605,91158296,91157075,91153096,91151654,91145736	91182824,91179686,91178585,91164717,91158509,91157188,91153189,91151792,91146252	Gene ID= ENSG00000011465.16 TPM= 44.4 Transcript Type= protein_coding
chr12	92140278	92145897	92140278	92145897	-	ENST00000256015.4@BTG1	ENST00000256015.4	protein_coding	92145388,92140278	92145897,92144447	Gene ID= ENSG00000133639.4 TPM= 30.89 Transcript Type= protein_coding
chr12	92466975	92467269	92466975	92467269	+	transcript3288.chr12.nnic@AC063949.2	transcript3288.chr12.nnic	antisense_RNA	92466975,92467141	92467002,92467269	Gene ID= ENSG00000266923.1 TPM= 3.86 Transcript Type= NA
chr12	92781961	92929299	92781961	92929299	-	transcript3291.chr12.nic@EEA1	transcript3291.chr12.nic	protein_coding	92929043,92891629,92864860,92857431,92857275,92853915,92852912,92852175,92851111,92842465,92832512,92827912,92826166,92819308,92816200,92812980,92811279,92809017,92802404,92801600,92798892,92787867,92781961	92929299,92891721,92864987,92857485,92857340,92853954,92853025,92852296,92851266,92842581,92832850,92828061,92826285,92819511,92816400,92813093,92811434,92809156,92802734,92801701,92799086,92788049,92782135	Gene ID= ENSG00000102189.16 TPM= 2.25 Transcript Type= NA
chr12	93377883	93408146	93377883	93408146	+	ENST00000337179.9@NUDT4	ENST00000337179.9	protein_coding	93377883,93394609,93395489,93398768,93399177	93378421,93394719,93395533,93398855,93408146	Gene ID= ENSG00000173598.13 TPM= 33.79 Transcript Type= protein_coding
chr12	93405690	93442262	93405690	93442262	-	ENST00000318066.6@UBE2N	ENST00000318066.6	protein_coding	93441855,93411053,93410734,93405690	93442262,93411299,93410874,93410079	Gene ID= ENSG00000177889.9 TPM= 33.79 Transcript Type= protein_coding
chr12	93467488	93516213	93467488	93516213	+	ENST00000549982.5@MRPL42	ENST00000549982.5	protein_coding	93467488,93469192,93476954,93479388,93487497,93501176	93467554,93469355,93477017,93479472,93487660,93516213	Gene ID= ENSG00000198015.12 TPM= 7.72 Transcript Type= protein_coding
chr12	93467517	93502652	93467517	93502652	+	ENST00000393128.8@MRPL42	ENST00000393128.8	protein_coding	93467517,93469192,93476954,93479388,93487497,93501185	93467554,93469355,93477017,93479472,93487660,93502652	Gene ID= ENSG00000198015.12 TPM= 6.76 Transcript Type= protein_coding
chr12	93467518	93502661	93467518	93502661	+	ENST00000358678.7@MRPL42	ENST00000358678.7	protein_coding	93467518,93469192,93470486,93476954,93479388,93487497,93501176	93467554,93469355,93470590,93477017,93479472,93487660,93502661	Gene ID= ENSG00000198015.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	93677375	93850736	93677375	93850736	+	ENST00000332896.7@CRADD	ENST00000332896.7	protein_coding	93677375,93678769,93849970	93677472,93679072,93850736	Gene ID= ENSG00000169372.12 TPM= 4.83 Transcript Type= protein_coding
chr12	94364242	94459867	94364242	94459867	-	transcript3377.chr12.nic@CEP83	transcript3377.chr12.nic	protein_coding	94459557,94435275,94412318,94411697,94403170,94400850,94378791,94375886,94369922,94368057,94364242	94459867,94435327,94412591,94411847,94403262,94400981,94379042,94376017,94370036,94368201,94367943	Gene ID= ENSG00000173588.14 TPM= 2.9 Transcript Type= NA
chr12	94308280	94459946	94308280	94459946	-	ENST00000339839.9@CEP83	ENST00000339839.9	protein_coding	94459557,94412318,94411697,94403170,94400850,94378791,94375886,94369922,94368057,94367794,94335589,94333482,94331700,94312914,94309918,94308280	94459946,94412591,94411847,94403262,94400981,94379042,94376017,94370036,94368201,94367943,94335664,94333639,94331829,94313017,94310107,94308917	Gene ID= ENSG00000173588.14 TPM= 4.83 Transcript Type= protein_coding
chr12	94648560	94650517	94648560	94650517	-	transcript3388.chr12.nnic@NA	transcript3388.chr12.nnic	NA	94648560	94650517	Gene ID= novel_gene_chr12_3389 TPM= 4.83 Transcript Type= NA
chr12	94971333	95003770	94971333	95003770	-	ENST00000327772.6@NDUFA12	ENST00000327772.6	protein_coding	95003595,95002739,94994170,94971333	95003770,95002821,94994257,94971620	Gene ID= ENSG00000184752.12 TPM= 174.72 Transcript Type= protein_coding
chr12	94971336	95003713	94971336	95003713	-	ENST00000547986.5@NDUFA12	ENST00000547986.5	protein_coding	95003595,95002739,94971336	95003713,95002821,94971620	Gene ID= ENSG00000184752.12 TPM= 10.62 Transcript Type= protein_coding
chr12	95021893	95073563	95021893	95073563	-	transcript3392.chr12.nic@NR2C1	transcript3392.chr12.nic	protein_coding	95073380,95067331,95062850,95062508,95059906,95058348,95057731,95057553,95051762,95049068,95040476,95031349,95028387,95025150,95021893	95073563,95067391,95062887,95062738,95059984,95058489,95057878,95057643,95051943,95049233,95040597,95031488,95028509,95025255,95022403	Gene ID= ENSG00000120798.16 TPM= 1.93 Transcript Type= NA
chr12	95021893	95073628	95021893	95073628	-	transcript3402.chr12.nnic@NR2C1	transcript3402.chr12.nnic	protein_coding	95073380,95067331,95062508,95059906,95057731,95057553,95051762,95049068,95040476,95028387,95025150,95021893	95073628,95067391,95062738,95059984,95058489,95057643,95051943,95049233,95040597,95028524,95025255,95022403	Gene ID= ENSG00000120798.16 TPM= 1.93 Transcript Type= NA
chr12	95217802	95300634	95217802	95300634	+	transcript3416.chr12.nic@VEZT	transcript3416.chr12.nic	protein_coding	95217802,95251940,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95298862,95300165	95217886,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95298943,95300634	Gene ID= ENSG00000028203.17 TPM= 4.83 Transcript Type= NA
chr12	95217808	95302702	95217808	95302702	+	transcript3421.chr12.nic@VEZT	transcript3421.chr12.nic	protein_coding	95217808,95224180,95251940,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95224236,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95302702	Gene ID= ENSG00000028203.17 TPM= 1.93 Transcript Type= NA
chr12	95217746	95302790	95217746	95302790	+	ENST00000436874.5@VEZT	ENST00000436874.5	protein_coding	95217746,95251940,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95302790	Gene ID= ENSG00000028203.17 TPM= 2.9 Transcript Type= protein_coding
chr12	95217808	95300654	95217808	95300654	+	transcript3436.chr12.nic@VEZT	transcript3436.chr12.nic	protein_coding	95217808,95251940,95262906,95266357,95270039,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95300654	Gene ID= ENSG00000028203.17 TPM= 1.93 Transcript Type= NA
chr12	95217807	95300654	95217807	95300654	+	transcript3445.chr12.nic@VEZT	transcript3445.chr12.nic	protein_coding	95217807,95251940,95266357,95270039,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95300654	Gene ID= ENSG00000028203.17 TPM= 1.93 Transcript Type= NA
chr12	95217818	95300654	95217818	95300654	+	ENST00000551994.5@VEZT	ENST00000551994.5	protein_coding	95217818,95251940,95257154,95262906,95266357,95270039,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95300654	Gene ID= ENSG00000028203.17 TPM= 8.69 Transcript Type= nonsense_mediated_decay
chr12	95217761	95301172	95217761	95301172	+	ENST00000547997.5@VEZT	ENST00000547997.5	protein_coding	95217761,95251940,95256550,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95256622,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95301172	Gene ID= ENSG00000028203.17 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr12	95297400	95303050	95297400	95303050	-	transcript3450.chr12.nnic@NA	transcript3450.chr12.nnic	NA	95297400	95303050	Gene ID= novel_gene_chr12_3451 TPM= 2.9 Transcript Type= NA
chr12	95473951	95515839	95473951	95515839	+	ENST00000323666.9@METAP2	ENST00000323666.9	protein_coding	95473951,95476071,95483215,95485879,95494056,95494957,95496004,95504065,95511895,95512801,95513652	95474330,95476178,95483280,95485981,95494217,95495138,95496098,95504161,95511998,95512916,95515839	Gene ID= ENSG00000111142.13 TPM= 106.18 Transcript Type= protein_coding
chr12	95474162	95514326	95474162	95514326	+	ENST00000551840.5@METAP2	ENST00000551840.5	protein_coding	95474162,95476074,95483215,95485879,95494056,95494957,95496004,95504065,95511895,95512801,95513652	95474330,95476178,95483280,95485981,95494217,95495138,95496098,95504161,95511998,95512916,95514326	Gene ID= ENSG00000111142.13 TPM= 85.91 Transcript Type= protein_coding
chr12	95657807	95790758	95657807	95790758	-	ENST00000343702.8@NTN4	ENST00000343702.8	protein_coding	95790255,95786939,95737866,95713212,95710441,95683498,95682707,95670078,95665810,95657807	95790758,95787468,95738144,95713338,95710629,95683711,95682822,95670146,95665980,95659222	Gene ID= ENSG00000074527.11 TPM= 8.69 Transcript Type= protein_coding
chr12	95858928	95867053	95858928	95867053	+	ENST00000266735.9@SNRPF	ENST00000266735.9	protein_coding	95858928,95861168,95865324,95866005	95859076,95861293,95865388,95867053	Gene ID= ENSG00000139343.10 TPM= 34.75 Transcript Type= protein_coding
chr12	96000828	96035661	96000828	96035661	-	ENST00000228740.6@LTA4H	ENST00000228740.6	protein_coding	96035361,96029055,96027444,96024479,96022147,96021085,96019168,96018763,96017557,96017044,96015583,96014855,96013750,96013188,96009094,96006314,96003838,96002960,96000828	96035661,96029185,96027564,96024547,96022251,96021137,96019240,96018903,96017580,96017114,96015694,96014999,96013853,96013258,96009148,96006409,96003920,96003064,96001106	Gene ID= ENSG00000111144.9 TPM= 39.58 Transcript Type= protein_coding
chr12	96000830	96035588	96000830	96035588	-	transcript3470.chr12.nic@LTA4H	transcript3470.chr12.nic	protein_coding	96035361,96029055,96027444,96024479,96022147,96021085,96019168,96018763,96017557,96017044,96015583,96014855,96013750,96013188,96009094,96006314,96002960,96000830	96035588,96029185,96027564,96024547,96022251,96021137,96019240,96018903,96017580,96017114,96015694,96014999,96013853,96013258,96009148,96006409,96003064,96001106	Gene ID= ENSG00000111144.9 TPM= 7.72 Transcript Type= NA
chr12	96194382	96269835	96194382	96269835	+	ENST00000228741.7@ELK3	ENST00000228741.7	protein_coding	96194382,96223565,96246940,96259731,96267082	96194705,96223773,96247734,96259853,96269835	Gene ID= ENSG00000111145.7 TPM= 3.86 Transcript Type= protein_coding
chr12	96278261	96400560	96278261	96400560	-	ENST00000261211.7@CDK17	ENST00000261211.7	protein_coding	96399986,96334719,96323948,96313321,96311052,96300304,96298869,96297627,96297270,96294999,96289167,96286664,96286043,96283603,96282509,96280808,96278261	96400560,96334865,96324112,96313454,96311177,96300360,96298983,96297721,96297332,96295122,96289287,96286761,96286148,96283645,96282599,96280885,96280279	Gene ID= ENSG00000059758.7 TPM= 3.86 Transcript Type= protein_coding
chr12	96397295	96400557	96397295	96400557	-	transcript3481.chr12.nnic@NA	transcript3481.chr12.nnic	NA	96397295	96400557	Gene ID= novel_gene_chr12_3482 TPM= 1.93 Transcript Type= NA
chr12	96907237	96953221	96907237	96953221	+	transcript3483.chr12.nic@NEDD1	transcript3483.chr12.nic	protein_coding	96907237,96907604,96909752,96912723,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949	96907300,96907624,96909895,96912817,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953221	Gene ID= ENSG00000139350.11 TPM= 2.9 Transcript Type= NA
chr12	96907223	96953777	96907223	96953777	+	ENST00000266742.8@NEDD1	ENST00000266742.8	protein_coding	96907223,96907604,96909752,96912723,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949	96907300,96907856,96909895,96912817,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953777	Gene ID= ENSG00000139350.11 TPM= 4.83 Transcript Type= protein_coding
chr12	96907224	96953351	96907224	96953351	+	ENST00000429527.6@NEDD1	ENST00000429527.6	protein_coding	96907224,96909752,96912723,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949	96907300,96909895,96912817,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953351	Gene ID= ENSG00000139350.11 TPM= 1.93 Transcript Type= protein_coding
chr12	96912675	96953577	96912675	96953577	+	transcript3498.chr12.nnic@NEDD1	transcript3498.chr12.nnic	protein_coding	96912675,96917621,96919985,96924833,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949	96912817,96917737,96920125,96924942,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953577	Gene ID= ENSG00000139350.11 TPM= 1.93 Transcript Type= NA
chr12	98515512	98550379	98515512	98550379	+	ENST00000556029.5@TMPO	ENST00000556029.5	protein_coding	98515512,98527886,98531680,98537475,98544230,98544442,98544951,98546359,98547573	98516146,98528012,98531838,98537572,98544349,98544537,98545061,98546447,98550379	Gene ID= ENSG00000120802.13 TPM= 1.93 Transcript Type= protein_coding
chr12	98515630	98535634	98515630	98535634	+	ENST00000266732.8@TMPO	ENST00000266732.8	protein_coding	98515630,98527886,98531680,98532823	98516146,98528012,98531838,98535634	Gene ID= ENSG00000120802.13 TPM= 1.93 Transcript Type= protein_coding
chr12	98593591	98606379	98593591	98606379	+	ENST00000401722.7@SLC25A3	ENST00000401722.7	protein_coding	98593591,98593979,98595727,98597856,98598522,98599955,98601171,98601368	98593740,98594135,98595848,98598035,98598703,98600127,98601281,98606379	Gene ID= ENSG00000075415.12 TPM= 28.96 Transcript Type= protein_coding
chr12	98593676	98601708	98593676	98601708	+	transcript3521.chr12.nic@SLC25A3	transcript3521.chr12.nic	protein_coding	98593676,98595433,98597856,98598522,98599955,98601171,98601368	98594135,98595557,98598035,98598703,98600127,98601281,98601708	Gene ID= ENSG00000075415.12 TPM= 78.51 Transcript Type= NA
chr12	98593650	98601707	98593650	98601707	+	ENST00000551917.5@SLC25A3	ENST00000551917.5	protein_coding	98593650,98593979,98595433,98597856,98598522,98599955,98601171,98601368	98593740,98594135,98595557,98598035,98598703,98600127,98601281,98601707	Gene ID= ENSG00000075415.12 TPM= 808.28 Transcript Type= protein_coding
chr12	98593660	98601708	98593660	98601708	+	ENST00000552981.5@SLC25A3	ENST00000552981.5	protein_coding	98593660,98593975,98595727,98597856,98598522,98599955,98601171,98601368	98593740,98594135,98595848,98598035,98598703,98600127,98601281,98601708	Gene ID= ENSG00000075415.12 TPM= 33.14 Transcript Type= protein_coding
chr12	98613405	98645113	98613405	98645113	-	ENST00000342502.6@IKBIP	ENST00000342502.6	protein_coding	98644523,98634296,98613405	98645113,98634413,98614340	Gene ID= ENSG00000166130.14 TPM= 1.93 Transcript Type= protein_coding
chr12	100057572	100142881	100057572	100142881	-	transcript3530.chr12.nic@UHRF1BP1L	transcript3530.chr12.nic	protein_coding	100142592,100108386,100103913,100102766,100098352,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100059850,100058029,100057572	100142881,100108548,100103951,100102857,100098541,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100060043,100059533,100057746	Gene ID= ENSG00000111647.12 TPM= 7.72 Transcript Type= NA
chr12	100037076	100142848	100037076	100142848	-	ENST00000279907.11@UHRF1BP1L	ENST00000279907.11	protein_coding	100142592,100108386,100103913,100102766,100098352,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100059850,100058029,100057571,100051079,100050168,100047943,100047530,100039596,100037076	100142848,100108548,100103951,100102857,100098541,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100060043,100059533,100057746,100051221,100050318,100048196,100047638,100039789,100037755	Gene ID= ENSG00000111647.12 TPM= 6.76 Transcript Type= protein_coding
chr12	100069908	100142847	100069908	100142847	-	ENST00000356828.7@UHRF1BP1L	ENST00000356828.7	protein_coding	100142592,100108386,100103913,100102766,100098352,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100069908	100142847,100108548,100103951,100102857,100098541,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100070169	Gene ID= ENSG00000111647.12 TPM= 13.51 Transcript Type= protein_coding
chr12	100200087	100224423	100200087	100224423	+	ENST00000188312.6@ACTR6	ENST00000188312.6	protein_coding	100200087,100204940,100205676,100207663,100210073,100210295,100212256,100212450,100218415,100220008,100223786	100200919,100205057,100205744,100207786,100210208,100210351,100212354,100212528,100218586,100220146,100224423	Gene ID= ENSG00000075089.9 TPM= 14.48 Transcript Type= protein_coding
chr12	100200817	100224423	100200817	100224423	+	ENST00000548180.5@ACTR6	ENST00000548180.5	protein_coding	100200817,100204940,100205676,100207663,100210073,100210295,100212256,100212450,100218415,100220008,100223786	100200919,100205057,100205757,100207786,100210208,100210351,100212354,100212528,100218586,100220146,100224423	Gene ID= ENSG00000075089.9 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr12	100267384	100341724	100267384	100341724	+	ENST00000360820.6@SCYL2	ENST00000360820.6	protein_coding	100267384,100282943,100291503,100298031,100311044,100312432,100313422,100314489,100315558,100317803,100323525,100326622,100329201,100334166,100335625,100335811,100337387,100338528	100267792,100283147,100291660,100298175,100311193,100312653,100313538,100314614,100315734,100317925,100323638,100326754,100329319,100334266,100335691,100335906,100337506,100341724	Gene ID= ENSG00000136021.18 TPM= 9.65 Transcript Type= protein_coding
chr12	100267246	100340139	100267246	100340139	+	ENST00000635101.1@SCYL2	ENST00000635101.1	protein_coding	100267246,100282943,100291503,100298031,100311044,100312432,100313422,100314489,100315558,100317681,100317803,100323525,100326622,100329201,100334166,100335625,100335811,100337387,100338528	100267396,100283147,100291660,100298175,100311193,100312653,100313538,100314614,100315734,100317692,100317925,100323638,100326754,100329319,100334266,100335691,100335906,100337506,100340139	Gene ID= ENSG00000136021.18 TPM= 1.93 Transcript Type= protein_coding
chr12	101280109	101296589	101280109	101296589	+	transcript3549.chr12.nic@UTP20	transcript3549.chr12.nic	protein_coding	101280109,101281116,101285570,101285749,101286321,101288960,101290137,101290733,101291742,101291970,101293168,101295480	101280327,101281196,101285636,101285881,101286509,101289041,101290274,101290888,101291888,101292104,101293245,101296589	Gene ID= ENSG00000120800.4 TPM= 1.93 Transcript Type= NA
chr12	101280109	101386616	101280109	101386616	+	ENST00000261637.4@UTP20	ENST00000261637.4	protein_coding	101280109,101281116,101285570,101285749,101286321,101288960,101290137,101290733,101291742,101291970,101293168,101295480,101299682,101299973,101302448,101305915,101306699,101308185,101309763,101311719,101312036,101317478,101319545,101320852,101321504,101327081,101329241,101333301,101334425,101338051,101338813,101340523,101342446,101342787,101342941,101344595,101345554,101346451,101352055,101353047,101354832,101356554,101356926,101361962,101363576,101365459,101366558,101367860,101369721,101370432,101371058,101372884,101373401,101373585,101374808,101375624,101379371,101381140,101383041,101383543,101385583,101385968	101280327,101281196,101285636,101285881,101286509,101289041,101290274,101290888,101291888,101292104,101293245,101295658,101299837,101300061,101302553,101306065,101306761,101308343,101309839,101311798,101312276,101317663,101319635,101320937,101321629,101327247,101329449,101333444,101334504,101338277,101338957,101340610,101342589,101342837,101343093,101344750,101345694,101346588,101352194,101353129,101355118,101356693,101357082,101362060,101363743,101365625,101366699,101367976,101369891,101370563,101371168,101372963,101373470,101373767,101374939,101375756,101379558,101381211,101383313,101383669,101385728,101386616	Gene ID= ENSG00000120800.4 TPM= 2.9 Transcript Type= protein_coding
chr12	101393120	101407820	101393120	101407820	-	ENST00000261636.12@ARL1	ENST00000261636.12	protein_coding	101407642,101405844,101402865,101401062,101396399,101393120	101407820,101405981,101402946,101401173,101396577,101395670	Gene ID= ENSG00000120805.13 TPM= 33.79 Transcript Type= protein_coding
chr12	101407239	101409061	101407239	101409061	+	transcript3566.chr12.nnic@NA	transcript3566.chr12.nnic	NA	101407239	101409061	Gene ID= novel_gene_chr12_3567 TPM= 5.79 Transcript Type= NA
chr12	101528003	101534380	101528003	101534380	+	transcript3568.chr12.nnic@NA	transcript3568.chr12.nnic	NA	101528003,101528874,101532324,101533981	101528509,101529030,101532408,101534380	Gene ID= novel_gene_chr12_3569 TPM= 1.93 Transcript Type= NA
chr12	101594971	101685876	101594971	101685876	+	ENST00000361685.6@MYBPC1	ENST00000361685.6	protein_coding	101594971,101614496,101617202,101626872,101627769,101629434,101631571,101632021,101634554,101636672,101642419,101644664,101646763,101648045,101649260,101651231,101652678,101653115,101659672,101661158,101662358,101663426,101667732,101670321,101673427,101675292,101677235,101678102,101680343,101684382,101685582	101595095,101614531,101617243,101626910,101627804,101629544,101631719,101632138,101634605,101636728,101642585,101644796,101646887,101648150,101649426,101651393,101652784,101653248,101659831,101661262,101662546,101663560,101667899,101670409,101673622,101675431,101677394,101678238,101680529,101684424,101685876	Gene ID= ENSG00000196091.13 TPM= 3393.33 Transcript Type= protein_coding
chr12	101594996	101685870	101594996	101685870	+	ENST00000361466.6@MYBPC1	ENST00000361466.6	protein_coding	101594996,101614496,101617202,101626872,101627769,101629434,101631571,101632021,101634554,101636672,101642419,101644664,101646763,101648045,101649260,101651231,101652678,101653115,101659672,101661158,101662358,101663426,101667732,101670321,101673427,101675292,101677235,101678102,101680343,101682604,101684382,101685582	101595095,101614531,101617243,101626910,101627804,101629544,101631719,101632138,101634605,101636728,101642585,101644796,101646887,101648150,101649426,101651393,101652784,101653248,101659831,101661262,101662546,101663560,101667899,101670409,101673622,101675431,101677394,101678238,101680529,101682662,101684424,101685870	Gene ID= ENSG00000196091.13 TPM= 1702.5 Transcript Type= protein_coding
chr12	101594984	101685870	101594984	101685870	+	ENST00000553190.5@MYBPC1	ENST00000553190.5	protein_coding	101594984,101614496,101617202,101629434,101631571,101632021,101634554,101636672,101642419,101644664,101646763,101648045,101649260,101651231,101652678,101653115,101659672,101661158,101662358,101663426,101667732,101670321,101673427,101675292,101677235,101678102,101680343,101684382,101685582	101595095,101614531,101617243,101629544,101631719,101632138,101634605,101636728,101642585,101644796,101646887,101648150,101649426,101651393,101652784,101653248,101659831,101661262,101662546,101663560,101667899,101670409,101673622,101675431,101677394,101678238,101680529,101684424,101685870	Gene ID= ENSG00000196091.13 TPM= 2222.58 Transcript Type= protein_coding
chr12	101594971	101685812	101594971	101685812	+	ENST00000547509.5@MYBPC1	ENST00000547509.5	protein_coding	101594971,101614496,101629434,101631571,101632021,101634554,101636672,101642419,101644664,101646763,101648045,101649260,101651231,101652678,101653115,101659672,101661158,101662358,101663426,101667732,101670321,101673427,101675292,101677235,101678102,101680343,101682604,101684382,101685582	101595095,101614531,101629544,101631719,101632138,101634605,101636728,101642585,101644796,101646887,101648150,101649426,101651393,101652784,101653248,101659831,101661262,101662546,101663560,101667899,101670409,101673622,101675431,101677394,101678238,101680529,101682662,101684424,101685812	Gene ID= ENSG00000196091.13 TPM= 8.64 Transcript Type= protein_coding
chr12	101696525	101697316	101696525	101697316	-	transcript4001.chr12.nnic@NA	transcript4001.chr12.nnic	NA	101696525	101697316	Gene ID= novel_gene_chr12_4002 TPM= 1.93 Transcript Type= NA
chr12	101697644	101729071	101697644	101729071	+	transcript3994.chr12.nnic@CHPT1	transcript3994.chr12.nnic	protein_coding	101697644,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728901	101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726497,101729071	Gene ID= ENSG00000111666.10 TPM= 4.83 Transcript Type= NA
chr12	101697627	101729074	101697627	101729074	+	ENST00000229266.7@CHPT1	ENST00000229266.7	protein_coding	101697627,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728901	101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726404,101729074	Gene ID= ENSG00000111666.10 TPM= 19.31 Transcript Type= protein_coding
chr12	101765761	101830831	101765761	101830831	-	transcript3990.chr12.nic@GNPTAB	transcript3990.chr12.nic	protein_coding	101830559,101796677,101789938,101788548,101786012,101780557,101780152,101770996,101770406,101770021,101768037,101765761	101830831,101796762,101790057,101788589,101786217,101780621,101780286,101771157,101770585,101770191,101768160,101766294	Gene ID= ENSG00000111670.14 TPM= 1.93 Transcript Type= NA
chr12	101745497	101830938	101745497	101830938	-	ENST00000299314.11@GNPTAB	ENST00000299314.11	protein_coding	101830559,101796677,101789938,101788548,101786012,101780557,101780152,101770996,101770406,101770021,101768037,101766091,101764202,101761564,101761127,101760030,101757572,101757212,101753372,101749101,101745497	101830938,101796762,101790057,101788589,101786217,101780621,101780286,101771157,101770585,101770191,101768160,101766294,101765304,101761763,101761346,101760143,101757657,101757310,101753539,101749191,101747241	Gene ID= ENSG00000111670.14 TPM= 10.62 Transcript Type= protein_coding
chr12	101877351	101923623	101877351	101923623	+	ENST00000258534.12@DRAM1	ENST00000258534.12	protein_coding	101877351,101897863,101901291,101908186,101914174,101920109,101921216	101877920,101897930,101901433,101908363,101914232,101920201,101923623	Gene ID= ENSG00000136048.13 TPM= 9.17 Transcript Type= protein_coding
chr12	101877580	101923623	101877580	101923623	+	transcript4007.chr12.nnic@DRAM1	transcript4007.chr12.nnic	protein_coding	101877580,101897863,101901291,101920109,101921216	101877920,101897930,101901433,101920201,101923623	Gene ID= ENSG00000136048.13 TPM= 4.34 Transcript Type= NA
chr12	102012942	102062061	102012942	102062061	-	transcript4008.chr12.nnic@WASHC3	transcript4008.chr12.nnic	protein_coding	102061912,102061248,102050518,102050189,102046054,102044105,102039868,102025974,102012942	102062061,102061346,102050639,102050291,102046119,102044212,102039978,102026038,102013192	Gene ID= ENSG00000120860.10 TPM= 2.56 Transcript Type= NA
chr12	102012942	102062061	102012942	102062061	-	transcript4011.chr12.nic@WASHC3	transcript4011.chr12.nic	protein_coding	102061912,102061248,102050518,102046054,102044105,102039868,102025974,102012942	102062061,102061346,102050639,102046119,102044212,102039978,102026038,102013192	Gene ID= ENSG00000120860.10 TPM= 6.42 Transcript Type= NA
chr12	102012942	102062068	102012942	102062068	-	transcript4012.chr12.nnic@WASHC3	transcript4012.chr12.nnic	protein_coding	102061912,102050189,102046054,102044105,102039868,102025974,102012942	102062068,102050291,102046119,102044212,102039978,102026038,102013192	Gene ID= ENSG00000120860.10 TPM= 7.38 Transcript Type= NA
chr12	102012939	102062124	102012939	102062124	-	ENST00000240079.10@WASHC3	ENST00000240079.10	protein_coding	102061912,102061248,102046054,102044105,102039868,102025974,102012939	102062124,102061346,102046119,102044212,102039978,102026038,102013192	Gene ID= ENSG00000120860.10 TPM= 20.9 Transcript Type= protein_coding
chr12	102012944	102062034	102012944	102062034	-	ENST00000535501.5@WASHC3	ENST00000535501.5	protein_coding	102061912,102061248,102050189,102046054,102044105,102039868,102025974,102012944	102062034,102061346,102050291,102046119,102044212,102039975,102026038,102013192	Gene ID= ENSG00000120860.10 TPM= 1.35 Transcript Type= nonsense_mediated_decay
chr12	102073103	102120124	102073103	102120124	-	ENST00000552283.5@NUP37	ENST00000552283.5	protein_coding	102120050,102118363,102112108,102101032,102099106,102085766,102077322,102076797,102075001,102073103	102120124,102118583,102112232,102101104,102099200,102085856,102077503,102076847,102075094,102074467	Gene ID= ENSG00000075188.8 TPM= 4.83 Transcript Type= protein_coding
chr12	102395874	102480645	102395874	102480645	-	ENST00000337514.10@IGF1	ENST00000337514.10	protein_coding	102480319,102475643,102419509,102395874	102480645,102475799,102419690,102402566	Gene ID= ENSG00000017427.15 TPM= 2.9 Transcript Type= protein_coding
chr12	102417491	102480563	102417491	102480563	-	ENST00000307046.8@IGF1	ENST00000307046.8	protein_coding	102480319,102475643,102419509,102417491	102480563,102475799,102419690,102418003	Gene ID= ENSG00000017427.15 TPM= 3.86 Transcript Type= protein_coding
chr12	103772799	103776686	103772799	103776686	+	transcript4024.chr12.nnic@NA	transcript4024.chr12.nnic	NA	103772799	103776686	Gene ID= novel_gene_chr12_4025 TPM= 7.72 Transcript Type= NA
chr12	103930327	103947926	103930327	103947926	+	transcript4027.chr12.nic@HSP90B1	transcript4027.chr12.nic	protein_coding	103930327,103931521,103931711,103932277,103932826,103933956,103937695,103938340,103939509,103941410,103941629,103941832,103942527,103943074,103943738,103946618,103946786,103947311,103947633	103930564,103931623,103931748,103932418,103932942,103934287,103937806,103938459,103939625,103941547,103941706,103941897,103942796,103943319,103943874,103946696,103946941,103947430,103947926	Gene ID= ENSG00000166598.14 TPM= 5.31 Transcript Type= NA
chr12	103930327	103938426	103930327	103938426	+	transcript4034.chr12.nic@HSP90B1	transcript4034.chr12.nic	protein_coding	103930327,103931521,103932277,103932826,103933956,103937695,103938340	103930564,103931623,103932418,103932942,103934287,103937806,103938426	Gene ID= ENSG00000166598.14 TPM= 30.89 Transcript Type= NA
chr12	103930334	103947926	103930334	103947926	+	ENST00000299767.9@HSP90B1	ENST00000299767.9	protein_coding	103930334,103931521,103932277,103932826,103933956,103937695,103938340,103939509,103941410,103941629,103941832,103942527,103943074,103943738,103946618,103946786,103947311,103947633	103930564,103931623,103932418,103932942,103934287,103937806,103938459,103939625,103941547,103941706,103941897,103942796,103943319,103943874,103946696,103946941,103947430,103947926	Gene ID= ENSG00000166598.14 TPM= 115.35 Transcript Type= protein_coding
chr12	103930334	103938779	103930334	103938779	+	ENST00000640977.1@HSP90B1	ENST00000640977.1	protein_coding	103930334,103931521,103932277,103932826,103933956,103937695,103938340,103938773	103930564,103931623,103932418,103932942,103934287,103937806,103938422,103938779	Gene ID= ENSG00000166598.14 TPM= 35.72 Transcript Type= protein_coding
chr12	103951205	103957228	103951205	103957228	-	transcript4040.chr12.nnic@C12orf73	transcript4040.chr12.nnic	protein_coding	103957069,103956631,103954875,103951205	103957228,103956748,103954968,103951630	Gene ID= ENSG00000204954.9 TPM= 2.9 Transcript Type= NA
chr12	103965511	103966143	103965511	103966143	-	transcript4056.chr12.nnic@NA	transcript4056.chr12.nnic	NA	103965511	103966143	Gene ID= novel_gene_chr12_4057 TPM= 1.93 Transcript Type= NA
chr12	103965804	103988874	103965804	103988874	+	ENST00000392872.7@TDG	ENST00000392872.7	protein_coding	103965804,103976918,103979831,103980893,103982799,103983136,103983295,103984749,103985603,103986948	103966060,103977060,103980072,103980962,103982934,103983218,103983389,103984920,103985728,103988874	Gene ID= ENSG00000139372.14 TPM= 12.55 Transcript Type= protein_coding
chr12	104064457	104106524	104064457	104106524	+	ENST00000229330.8@HCFC2	ENST00000229330.8	protein_coding	104064457,104066167,104067947,104079445,104080746,104082500,104082713,104086847,104087986,104093386,104095360,104096360,104098343,104101968,104102959	104064723,104066315,104068107,104079653,104080830,104082606,104082901,104087014,104088038,104093563,104095563,104096433,104098480,104102153,104106524	Gene ID= ENSG00000111727.11 TPM= 6.76 Transcript Type= protein_coding
chr12	104064527	104103466	104064527	104103466	+	transcript4066.chr12.nic@HCFC2	transcript4066.chr12.nic	protein_coding	104064527,104066167,104067947,104079445,104080746,104082500,104082713,104086847,104087986,104093386,104095360,104096360,104101968,104102959	104064723,104066315,104068107,104079653,104080830,104082606,104082901,104087014,104088038,104093563,104095563,104098480,104102153,104103466	Gene ID= ENSG00000111727.11 TPM= 1.93 Transcript Type= NA
chr12	104117077	104138289	104117077	104138289	-	ENST00000240055.7@NFYB	ENST00000240055.7	protein_coding	104138141,104135448,104128424,104126114,104123226,104121240,104120400,104117077	104138289,104135532,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 1.93 Transcript Type= protein_coding
chr12	104118092	104138086	104118092	104138086	-	transcript4082.chr12.nnic@NFYB	transcript4082.chr12.nnic	protein_coding	104137345,104135448,104128424,104126114,104123226,104121240,104120400,104118092	104138086,104135532,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 2.9 Transcript Type= NA
chr12	104119355	104138017	104119355	104138017	-	ENST00000551727.5@NFYB	ENST00000551727.5	protein_coding	104137376,104135448,104128424,104126114,104123226,104121240,104120400,104119355	104138017,104135532,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 11.58 Transcript Type= protein_coding
chr12	104287011	104350283	104287011	104350283	+	transcript4103.chr12.nic@TXNRD1	transcript4103.chr12.nic	protein_coding	104287011,104288931,104290993,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104287109,104289040,104291104,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 7.05 Transcript Type= NA
chr12	104286944	104350283	104286944	104350283	+	transcript4106.chr12.nnic@TXNRD1	transcript4106.chr12.nnic	protein_coding	104286944,104288931,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104346042,104348353	104287109,104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104346155,104350283	Gene ID= ENSG00000198431.15 TPM= 4.34 Transcript Type= NA
chr12	104286881	104350283	104286881	104350283	+	ENST00000526691.5@TXNRD1	ENST00000526691.5	protein_coding	104286881,104288931,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104287346,104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 25.39 Transcript Type= protein_coding
chr12	104286979	104350283	104286979	104350283	+	transcript4112.chr12.nic@TXNRD1	transcript4112.chr12.nic	protein_coding	104286979,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104287109,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 9.94 Transcript Type= NA
chr12	104288909	104350283	104288909	104350283	+	transcript4114.chr12.nic@TXNRD1	transcript4114.chr12.nic	protein_coding	104288909,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 10.91 Transcript Type= NA
chr12	104265309	104265836	104265309	104265836	+	ENST00000462885.1@RPL18AP3	ENST00000462885.1	processed_pseudogene	104265309	104265836	Gene ID= ENSG00000213442.5 TPM= 48.27 Transcript Type= processed_pseudogene
chr12	104456971	104762014	104456971	104762014	+	ENST00000549260.5@CHST11	ENST00000549260.5	protein_coding	104456971,104601906,104756949	104457514,104601991,104762014	Gene ID= ENSG00000171310.10 TPM= 1.93 Transcript Type= protein_coding
chr12	104986310	105017624	104986310	105017624	+	ENST00000552951.6@C12orf45	ENST00000552951.6	protein_coding	104986310,104988167,104991712,104994478	104986467,104988253,104991848,105017624	Gene ID= ENSG00000151131.10 TPM= 10.62 Transcript Type= protein_coding
chr12	105107701	105164726	105107701	105164726	+	transcript4124.chr12.nic@WASHC4	transcript4124.chr12.nic	protein_coding	105107701,105111125,105114216,105114362,105115184,105115661,105118446,105120555,105121101,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105149615,105152343,105156726,105157236,105160001,105162749,105164111,105164641	105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133896,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105149749,105152451,105156792,105157322,105160148,105162845,105164307,105164726	Gene ID= ENSG00000136051.13 TPM= 16.41 Transcript Type= NA
chr12	105107701	105164726	105107701	105164726	+	transcript4128.chr12.nnic@WASHC4	transcript4128.chr12.nnic	protein_coding	105107701,105111125,105114216,105114362,105115184,105115661,105118446,105120555,105121101,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105152343,105156726,105157236,105160001,105162749,105164111,105164641	105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133896,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105152451,105156792,105157322,105160148,105162845,105164307,105164726	Gene ID= ENSG00000136051.13 TPM= 2.9 Transcript Type= NA
chr12	105107701	105147918	105107701	105147918	+	transcript4136.chr12.nic@WASHC4	transcript4136.chr12.nic	protein_coding	105107701,105111125,105114216,105114362,105115184,105115661,105118446,105120555,105121101,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042	105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133896,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147918	Gene ID= ENSG00000136051.13 TPM= 1.93 Transcript Type= NA
chr12	105173296	105236238	105173296	105236238	-	ENST00000258530.7@APPL2	ENST00000258530.7	protein_coding	105235959,105229125,105217666,105217069,105211230,105208158,105207971,105207061,105203703,105199373,105197765,105195585,105195445,105195261,105189991,105189772,105188273,105177226,105176876,105176035,105173296	105236238,105229223,105217725,105217140,105211317,105208199,105208029,105207207,105203785,105199531,105197953,105195627,105195501,105195349,105190155,105189824,105188447,105177262,105177016,105176082,105174448	Gene ID= ENSG00000136044.11 TPM= 22.2 Transcript Type= protein_coding
chr12	105330636	105371518	105330636	105371518	+	ENST00000443585.5@C12orf75	ENST00000443585.5	protein_coding	105330636,105348602,105365807,105366617,105367472,105370634	105330937,105348626,105365842,105366696,105367509,105371518	Gene ID= ENSG00000235162.8 TPM= 73.36 Transcript Type= protein_coding
chr12	105353509	105371203	105353509	105371203	+	ENST00000548336.1@C12orf75	ENST00000548336.1	protein_coding	105353509,105365807,105366617,105367472,105370634	105353586,105365842,105366696,105367509,105371203	Gene ID= ENSG00000235162.8 TPM= 1.93 Transcript Type= processed_transcript
chr12	105562496	105742591	105562496	105742591	+	transcript4154.chr12.nnic@CASC18	transcript4154.chr12.nnic	lincRNA	105562496,105737254,105741756	105562588,105737397,105742591	Gene ID= ENSG00000257859.1 TPM= 1.93 Transcript Type= NA
chr12	106063340	106140033	106063340	106140033	-	ENST00000261402.6@NUAK1	ENST00000261402.6	protein_coding	106138414,106106405,106086734,106083864,106072724,106070774,106063340	106140033,106106525,106086885,106083929,106072843,106070906,106067955	Gene ID= ENSG00000074590.13 TPM= 48.27 Transcript Type= protein_coding
chr12	106237993	106248000	106237993	106248000	-	transcript4166.chr12.nnic@CKAP4	transcript4166.chr12.nnic	protein_coding	106247861,106247369,106237993	106248000,106247569,106240349	Gene ID= ENSG00000136026.13 TPM= 1.93 Transcript Type= NA
chr12	106237993	106247931	106237993	106247931	-	transcript4169.chr12.nnic@CKAP4	transcript4169.chr12.nnic	protein_coding	106247653,106247369,106237993	106247931,106247581,106240349	Gene ID= ENSG00000136026.13 TPM= 1.93 Transcript Type= NA
chr12	106237877	106247988	106237877	106247988	-	ENST00000378026.4@CKAP4	ENST00000378026.4	protein_coding	106247369,106237877	106247988,106240349	Gene ID= ENSG00000136026.13 TPM= 7.72 Transcript Type= protein_coding
chr12	106302803	106347015	106302803	106347015	+	ENST00000299045.7@TCP11L2	ENST00000299045.7	protein_coding	106302803,106311041,106314358,106318344,106321486,106323510,106335639,106336032,106340826,106346286	106302941,106311232,106314493,106318464,106321706,106323646,106335826,106336213,106340998,106347015	Gene ID= ENSG00000166046.10 TPM= 3.86 Transcript Type= protein_coding
chr12	106347577	106348621	106347577	106348621	-	transcript4182.chr12.nnic@NA	transcript4182.chr12.nnic	NA	106347577	106348621	Gene ID= novel_gene_chr12_4183 TPM= 64.68 Transcript Type= NA
chr12	106357658	106510198	106357658	106510198	+	ENST00000228347.8@POLR3B	ENST00000228347.8	protein_coding	106357658,106363870,106366516,106366658,106369275,106369583,106376359,106378267,106380031,106393031,106405857,106410826,106427197,106430273,106432318,106433719,106437057,106437681,106444463,106454502,106457138,106459251,106463478,106496055,106496752,106501323,106504081,106509420	106357951,106363902,106366572,106366722,106369350,106369683,106376450,106378384,106380139,106393153,106405976,106410960,106427358,106430473,106432480,106433872,106437131,106437779,106444590,106454711,106457296,106459368,106463620,106496158,106496918,106501436,106504254,106510198	Gene ID= ENSG00000013503.9 TPM= 5.79 Transcript Type= protein_coding
chr12	106954032	106955680	106954032	106955680	-	transcript4191.chr12.nnic@NA	transcript4191.chr12.nnic	NA	106954032	106955680	Gene ID= novel_gene_chr12_4192 TPM= 1.93 Transcript Type= NA
chr12	106955722	106973984	106955722	106973984	+	ENST00000280756.8@TMEM263	ENST00000280756.8	protein_coding	106955722,106957082,106967111,106971105	106956065,106957149,106967180,106973984	Gene ID= ENSG00000151135.9 TPM= 9.65 Transcript Type= protein_coding
chr12	106955719	106974036	106955719	106974036	+	ENST00000548125.5@TMEM263	ENST00000548125.5	protein_coding	106955719,106967111,106971105	106956065,106967180,106974036	Gene ID= ENSG00000151135.9 TPM= 3.86 Transcript Type= protein_coding
chr12	106977291	106987166	106977291	106987166	-	ENST00000240050.8@MTERF2	ENST00000240050.8	protein_coding	106986969,106985115,106977291	106987166,106985225,106978771	Gene ID= ENSG00000120832.9 TPM= 6.76 Transcript Type= protein_coding
chr12	106977549	106987126	106977549	106987126	-	ENST00000552029.1@MTERF2	ENST00000552029.1	protein_coding	106985115,106977549	106987126,106978771	Gene ID= ENSG00000120832.9 TPM= 4.83 Transcript Type= protein_coding
chr12	106991364	107093829	106991364	107093829	-	ENST00000008527.9@CRY1	ENST00000008527.9	protein_coding	107092804,107022084,107005106,107001764,107001280,106999942,106999551,106997915,106997488,106997294,106992965,106992787,106991364	107093829,107022192,107005248,107001948,107001368,107000082,106999862,106998066,106997690,106997386,106993036,106992890,106992001	Gene ID= ENSG00000008405.11 TPM= 44.4 Transcript Type= protein_coding
chr12	107685732	107713167	107685732	107713167	+	ENST00000412830.7@PWP1	ENST00000412830.7	protein_coding	107685732,107688448,107688615,107692814,107693000,107696474,107697467,107699373,107702935,107703685,107704636,107708926,107709111,107710405,107712111	107685971,107688506,107688802,107692899,107693096,107696584,107697597,107699434,107703031,107703746,107704747,107709016,107709232,107710510,107713167	Gene ID= ENSG00000136045.11 TPM= 21.24 Transcript Type= protein_coding
chr12	107732866	107761160	107732866	107761160	-	ENST00000228437.9@PRDM4	ENST00000228437.9	protein_coding	107760957,107760505,107756832,107753924,107751415,107746275,107744543,107743197,107742221,107740946,107739383,107732866	107761160,107760771,107756965,107754109,107752209,107746424,107744661,107743282,107742348,107741260,107739551,107734522	Gene ID= ENSG00000110851.11 TPM= 11.58 Transcript Type= protein_coding
chr12	108515185	108521210	108515185	108521210	+	ENST00000552695.5@FICD	ENST00000552695.5	protein_coding	108515185,108516915,108518400	108515361,108517273,108521210	Gene ID= ENSG00000198855.6 TPM= 25.1 Transcript Type= protein_coding
chr12	108522580	108561389	108522580	108561389	-	ENST00000228284.7@SART3	ENST00000228284.7	protein_coding	108560843,108549088,108547887,108545139,108544427,108543028,108538934,108538065,108537488,108536708,108536514,108535359,108532222,108531204,108530142,108526099,108525457,108524316,108522580	108561389,108549214,108547991,108545323,108544478,108543152,108539089,108538203,108537595,108536785,108536572,108535468,108532334,108531280,108530310,108526553,108525609,108524506,108523634	Gene ID= ENSG00000075856.11 TPM= 5.79 Transcript Type= protein_coding
chr12	108522708	108561161	108522708	108561161	-	ENST00000546728.5@SART3	ENST00000546728.5	protein_coding	108560843,108549088,108547887,108545139,108544427,108543028,108538945,108538065,108537488,108536708,108536514,108535359,108532222,108531204,108530142,108526099,108525457,108524316,108522708	108561161,108549214,108547991,108545323,108544478,108543152,108539089,108538203,108537595,108536785,108536572,108535468,108532334,108531280,108530310,108526553,108525609,108524506,108523634	Gene ID= ENSG00000075856.11 TPM= 16.41 Transcript Type= nonsense_mediated_decay
chr12	108539102	108540654	108539102	108540654	+	transcript4237.chr12.nnic@NA	transcript4237.chr12.nnic	NA	108539102	108540654	Gene ID= novel_gene_chr12_4238 TPM= 1.93 Transcript Type= NA
chr12	108562588	108569368	108562588	108569368	+	transcript4240.chr12.nic@ISCU	transcript4240.chr12.nic	protein_coding	108562588,108564279,108565321,108567190,108567658,108568831	108562736,108564392,108565431,108567268,108567757,108569368	Gene ID= ENSG00000136003.15 TPM= 10.3 Transcript Type= NA
chr12	108562601	108569384	108562601	108569384	+	ENST00000311893.13@ISCU	ENST00000311893.13	protein_coding	108562601,108564279,108565321,108567190,108568831	108562736,108564392,108565431,108567268,108569384	Gene ID= ENSG00000136003.15 TPM= 158.48 Transcript Type= protein_coding
chr12	108562606	108569368	108562606	108569368	+	ENST00000392807.8@ISCU	ENST00000392807.8	protein_coding	108562606,108564060,108564279,108565321,108567190,108568831	108562736,108564155,108564392,108565431,108567268,108569368	Gene ID= ENSG00000136003.15 TPM= 9.82 Transcript Type= protein_coding
chr12	108622277	108633959	108622277	108633959	-	ENST00000550948.1@SELPLG	ENST00000550948.1	protein_coding	108633740,108622277	108633959,108624312	Gene ID= ENSG00000110876.9 TPM= 3.86 Transcript Type= protein_coding
chr12	108645109	108731596	108645109	108731596	-	ENST00000261401.7@CORO1C	ENST00000261401.7	protein_coding	108731429,108701124,108678272,108662029,108658738,108657304,108654306,108652272,108648963,108648605,108645109	108731596,108701323,108678394,108662158,108658919,108657423,108654410,108652417,108649020,108648850,108647522	Gene ID= ENSG00000110880.10 TPM= 23.17 Transcript Type= protein_coding
chr12	108802887	108857694	108802887	108857694	-	transcript4259.chr12.nic@SSH1	transcript4259.chr12.nic	protein_coding	108857428,108852638,108823258,108818249,108817038,108811260,108809693,108807633,108806301,108802887	108857694,108852678,108823361,108818313,108817159,108811328,108809758,108807827,108806394,108805184	Gene ID= ENSG00000084112.14 TPM= 10.62 Transcript Type= NA
chr12	108791919	108857590	108791919	108857590	-	ENST00000551165.5@SSH1	ENST00000551165.5	protein_coding	108857428,108852638,108823258,108818249,108817038,108811260,108809693,108807633,108806301,108805056,108802322,108800780,108799000,108791919	108857590,108852678,108823361,108818313,108817159,108811328,108809758,108807827,108806394,108805184,108802368,108800926,108799200,108792829	Gene ID= ENSG00000084112.14 TPM= 13.51 Transcript Type= protein_coding
chr12	108782698	108788354	108782698	108788354	-	transcript4263.chr12.nnic@NA	transcript4263.chr12.nnic	NA	108782698	108788354	Gene ID= novel_gene_chr12_4264 TPM= 20.27 Transcript Type= NA
chr12	109052586	109088026	109052586	109088026	+	ENST00000257548.9@USP30	ENST00000257548.9	protein_coding	109052586,109056682,109057926,109067524,109071612,109072305,109073438,109081334,109081933,109082663,109082843,109084953,109085667	109052761,109056791,109058108,109067627,109071710,109072350,109073532,109081393,109082019,109082743,109083062,109085073,109088026	Gene ID= ENSG00000135093.12 TPM= 7.72 Transcript Type= protein_coding
chr12	109088189	109093472	109088189	109093472	-	ENST00000343075.7@ALKBH2	ENST00000343075.7	protein_coding	109093247,109092507,109090009,109088189	109093472,109092787,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 7.08 Transcript Type= protein_coding
chr12	109088189	109093471	109088189	109093471	-	transcript4273.chr12.nic@ALKBH2	transcript4273.chr12.nic	protein_coding	109093350,109092507,109090009,109088189	109093471,109092787,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 2.25 Transcript Type= NA
chr12	109088189	109093473	109088189	109093473	-	transcript4275.chr12.nic@ALKBH2	transcript4275.chr12.nic	protein_coding	109093350,109092507,109090009,109088189	109093473,109092937,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 4.18 Transcript Type= NA
chr12	109088188	109093487	109088188	109093487	-	transcript4277.chr12.nic@ALKBH2	transcript4277.chr12.nic	protein_coding	109093247,109092507,109088188	109093487,109092937,109088512	Gene ID= ENSG00000189046.10 TPM= 3.86 Transcript Type= NA
chr12	109088189	109093501	109088189	109093501	-	transcript4278.chr12.nic@ALKBH2	transcript4278.chr12.nic	protein_coding	109092507,109090009,109088189	109093501,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 1.93 Transcript Type= NA
chr12	109088197	109093459	109088197	109093459	-	ENST00000429722.2@ALKBH2	ENST00000429722.2	protein_coding	109093247,109092507,109090009,109088197	109093459,109092937,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 15.44 Transcript Type= protein_coding
chr12	109098118	109110975	109098118	109110975	+	ENST00000336865.6@UNG	ENST00000336865.6	protein_coding	109098118,109099189,109101902,109102839,109103433,109109829	109098638,109099284,109101999,109102927,109103611,109110975	Gene ID= ENSG00000076248.10 TPM= 7.72 Transcript Type= protein_coding
chr12	109116571	109169160	109116571	109169160	+	transcript4292.chr12.nic@ACACB	transcript4292.chr12.nic	protein_coding	109116571,109139397,109166861	109116704,109140058,109169160	Gene ID= ENSG00000076555.15 TPM= 5.79 Transcript Type= NA
chr12	109116595	109268226	109116595	109268226	+	ENST00000338432.11@ACACB	ENST00000338432.11	protein_coding	109116595,109139397,109166861,109167896,109171805,109172275,109174132,109175931,109176153,109179088,109179917,109185579,109187999,109191613,109191847,109193648,109197008,109199402,109201567,109206710,109209165,109212836,109216618,109216796,109222507,109222799,109223815,109227371,109232669,109233748,109233938,109235313,109235606,109237165,109239830,109241078,109242437,109245626,109246179,109247606,109249984,109252046,109253015,109254214,109256140,109258268,109258973,109260480,109262357,109264232,109265110,109265389,109266236	109116704,109140058,109166993,109168034,109171914,109172356,109174230,109176040,109176263,109179297,109180087,109185740,109188162,109191763,109191950,109193729,109197153,109199552,109201701,109206856,109209353,109212936,109216706,109216920,109222620,109222912,109223904,109227489,109232806,109233847,109234045,109235369,109235647,109237380,109239985,109241281,109242592,109245748,109246448,109247703,109250104,109252156,109253158,109254334,109256236,109258364,109259108,109260657,109262469,109264386,109265280,109265525,109268226	Gene ID= ENSG00000076555.15 TPM= 163.46 Transcript Type= protein_coding
chr12	109448656	109477544	109448656	109477544	-	ENST00000228495.10@KCTD10	ENST00000228495.10	protein_coding	109477260,109469515,109460636,109457992,109457630,109456118,109448656	109477544,109469728,109460805,109458078,109457682,109456313,109451813	Gene ID= ENSG00000110906.12 TPM= 22.2 Transcript Type= protein_coding
chr12	109477402	109536705	109477402	109536705	+	ENST00000434735.6@UBE3B	ENST00000434735.6	protein_coding	109477402,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109491045,109497818,109498233,109499633,109501371,109503023,109507564,109509596,109510344,109511204,109516765,109521148,109521441,109523978,109524438,109526358,109529890,109530547,109533466,109534591	109477764,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109491127,109497923,109498353,109499810,109501534,109503190,109507735,109509714,109510458,109511303,109516884,109521324,109521551,109524115,109524503,109526416,109530072,109530658,109533558,109536705	Gene ID= ENSG00000151148.13 TPM= 15.93 Transcript Type= protein_coding
chr12	109477642	109536702	109477642	109536702	+	ENST00000342494.7@UBE3B	ENST00000342494.7	protein_coding	109477642,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109491045,109497818,109498233,109499633,109501371,109503023,109507564,109509596,109510344,109511204,109516765,109521148,109521441,109523978,109524438,109526358,109529890,109530547,109533466,109534591	109478109,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109491127,109497923,109498353,109499810,109501534,109503190,109507735,109509714,109510458,109511303,109516884,109521324,109521551,109524115,109524503,109526416,109530072,109530658,109533558,109536702	Gene ID= ENSG00000151148.13 TPM= 18.82 Transcript Type= protein_coding
chr12	109553737	109573874	109553737	109573874	-	ENST00000545712.6@MMAB	ENST00000545712.6	protein_coding	109573347,109571649,109568770,109565119,109561780,109561420,109561040,109559096,109553737	109573874,109571710,109568863,109565176,109561852,109561517,109561104,109559155,109557136	Gene ID= ENSG00000139428.11 TPM= 2.9 Transcript Type= protein_coding
chr12	109556703	109573503	109556703	109573503	-	ENST00000537496.5@MMAB	ENST00000537496.5	protein_coding	109573347,109571649,109568770,109565119,109561780,109561420,109561243,109561040,109559096,109556703	109573503,109571710,109568863,109565176,109561852,109561517,109561329,109561104,109559155,109557136	Gene ID= ENSG00000139428.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	109573756	109597263	109573756	109597263	+	transcript4320.chr12.nic@MVK	transcript4320.chr12.nic	protein_coding	109573756,109574809,109575998,109579165,109579802,109581395,109586022,109586754,109590771,109591241,109595028,109596426	109573873,109574900,109576145,109579282,109579946,109581550,109586125,109586799,109590861,109591357,109595181,109597263	Gene ID= ENSG00000110921.13 TPM= 2.73 Transcript Type= NA
chr12	109573812	109597266	109573812	109597266	+	ENST00000228510.7@MVK	ENST00000228510.7	protein_coding	109573812,109574809,109575998,109579802,109581395,109586022,109586754,109590771,109591241,109595028,109596426	109573873,109574900,109576145,109579946,109581550,109586125,109586799,109590861,109591357,109595181,109597266	Gene ID= ENSG00000110921.13 TPM= 17.69 Transcript Type= protein_coding
chr12	109573837	109597261	109573837	109597261	+	ENST00000392727.7@MVK	ENST00000392727.7	protein_coding	109573837,109574809,109575998,109579802,109586022,109586754,109590771,109591241,109595028,109596426	109573873,109574900,109576145,109579946,109586125,109586799,109590861,109591357,109595181,109597261	Gene ID= ENSG00000110921.13 TPM= 2.73 Transcript Type= protein_coding
chr12	109573793	109597236	109573793	109597236	+	ENST00000447878.6@MVK	ENST00000447878.6	protein_coding	109573793,109574809,109575998,109586022,109586754,109590771,109591241,109595028,109596426	109573873,109574900,109576145,109586125,109586799,109590861,109591357,109595181,109597236	Gene ID= ENSG00000110921.13 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	109714228	109770507	109714228	109770507	+	ENST00000538780.1@FAM222A	ENST00000538780.1	protein_coding	109714228,109744101,109768012	109714897,109744228,109770507	Gene ID= ENSG00000139438.5 TPM= 4.83 Transcript Type= protein_coding
chr12	109850943	109880541	109850943	109880541	-	transcript4331.chr12.nnic@GLTP	transcript4331.chr12.nnic	protein_coding	109880272,109858683,109857526,109855619,109852016,109850943	109880541,109858741,109857659,109855769,109852737,109851864	Gene ID= ENSG00000139433.9 TPM= 3.38 Transcript Type= NA
chr12	109850943	109880488	109850943	109880488	-	ENST00000318348.8@GLTP	ENST00000318348.8	protein_coding	109880272,109858683,109857526,109855619,109850943	109880488,109858741,109857659,109855769,109852737	Gene ID= ENSG00000139433.9 TPM= 14 Transcript Type= protein_coding
chr12	109900280	109918069	109900280	109918069	+	ENST00000405876.8@TCHP	ENST00000405876.8	protein_coding	109900280,109903027,109903937,109904737,109906572,109907526,109908586,109908871,109911063,109912991,109914442,109915403,109916591	109900426,109903214,109904147,109904793,109906640,109907699,109908698,109908937,109911235,109913072,109914627,109915546,109918069	Gene ID= ENSG00000139437.17 TPM= 1.93 Transcript Type= protein_coding
chr12	110041177	110048585	110041177	110048585	-	transcript4356.chr12.nic@C12orf76	transcript4356.chr12.nic	protein_coding	110048363,110041177	110048585,110042459	Gene ID= ENSG00000174456.13 TPM= 3.86 Transcript Type= NA
chr12	110124335	110218775	110124335	110218775	+	ENST00000552912.5@IFT81	ENST00000552912.5	protein_coding	110124335,110127360,110128046,110128950,110132547,110134948,110135327,110136776,110143382,110146953,110162919,110180422,110190920,110192617,110203864,110205443,110205595,110209171,110218044	110124443,110127524,110128149,110129130,110132636,110135013,110135437,110136860,110143545,110147048,110163065,110180571,110191048,110192706,110203950,110205514,110205680,110209216,110218775	Gene ID= ENSG00000122970.15 TPM= 1.93 Transcript Type= protein_coding
chr12	110281116	110351090	110281116	110351090	+	ENST00000308664.10@ATP2A2	ENST00000308664.10	protein_coding	110281116,110282604,110282713,110292020,110296599,110322992,110326390,110327553,110332597,110333181,110334012,110339281,110339503,110340659,110342228,110343232,110344886,110345249,110346001,110346201,110350292	110281907,110282621,110282795,110292124,110296737,110323072,110326475,110328017,110332685,110333283,110334143,110339403,110339721,110340994,110342448,110343434,110344971,110345382,110346118,110346321,110351090	Gene ID= ENSG00000174437.16 TPM= 1761.63 Transcript Type= protein_coding
chr12	110372900	110403730	110372900	110403730	-	ENST00000455511.7@ANAPC7	ENST00000455511.7	protein_coding	110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110377393,110376066,110372900	110403730,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110377617,110376216,110374333	Gene ID= ENSG00000196510.12 TPM= 6.76 Transcript Type= protein_coding
chr12	110373478	110403652	110373478	110403652	-	transcript4487.chr12.nnic@ANAPC7	transcript4487.chr12.nnic	protein_coding	110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110377393,110376066,110373478	110403652,110396452,110395220,110388623,110387892,110386418,110382960,110381948,110377617,110376216,110374333	Gene ID= ENSG00000196510.12 TPM= 1.93 Transcript Type= NA
chr12	110373478	110403730	110373478	110403730	-	transcript4492.chr12.nic@ANAPC7	transcript4492.chr12.nic	protein_coding	110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110376066,110373478	110403730,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110376216,110374333	Gene ID= ENSG00000196510.12 TPM= 1.93 Transcript Type= NA
chr12	110375477	110403730	110375477	110403730	-	ENST00000450008.2@ANAPC7	ENST00000450008.2	protein_coding	110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110377393,110375477	110403730,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110377617,110376216	Gene ID= ENSG00000196510.12 TPM= 5.79 Transcript Type= protein_coding
chr12	110434825	110450407	110434825	110450407	-	ENST00000228825.11@ARPC3	ENST00000228825.11	protein_coding	110450255,110445452,110440312,110437084,110436557,110436110,110434825	110450407,110445551,110440388,110437152,110436683,110436204,110435217	Gene ID= ENSG00000111229.15 TPM= 73.36 Transcript Type= protein_coding
chr12	110452484	110468266	110452484	110468266	-	ENST00000228827.7@GPN3	ENST00000228827.7	protein_coding	110468156,110465106,110459695,110457510,110455815,110455586,110453743,110452484	110468266,110465214,110459862,110457634,110455930,110455682,110453871,110453096	Gene ID= ENSG00000111231.8 TPM= 8.69 Transcript Type= protein_coding
chr12	110468364	110490385	110468364	110490385	+	ENST00000377673.9@FAM216A	ENST00000377673.9	protein_coding	110468364,110473078,110485078,110486325,110486534,110487861,110490019	110469018,110473118,110485199,110486454,110486717,110487943,110490385	Gene ID= ENSG00000204856.11 TPM= 2.9 Transcript Type= protein_coding
chr12	110491523	110502099	110491523	110502099	-	ENST00000360579.11@VPS29	ENST00000360579.11	protein_coding	110502049,110499535,110496012,110492996,110491523	110502099,110499546,110496203,110493231,110492122	Gene ID= ENSG00000111237.18 TPM= 36.68 Transcript Type= protein_coding
chr12	110533245	110583320	110533245	110583320	-	ENST00000354300.4@PPTC7	ENST00000354300.4	protein_coding	110582809,110551789,110545880,110539822,110538144,110533245	110583320,110551968,110546078,110539945,110538273,110537095	Gene ID= ENSG00000196850.5 TPM= 40.54 Transcript Type= protein_coding
chr12	110582105	110584043	110582105	110584043	+	transcript4553.chr12.nnic@NA	transcript4553.chr12.nnic	NA	110582105	110584043	Gene ID= novel_gene_chr12_4554 TPM= 7.72 Transcript Type= NA
chr12	110614027	110649430	110614027	110649430	+	ENST00000551590.5@TCTN1	ENST00000551590.5	protein_coding	110614027,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110641024,110641542,110642249,110644967,110647211,110647749,110649043	110614402,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649430	Gene ID= ENSG00000204852.15 TPM= 1.93 Transcript Type= protein_coding
chr12	110614027	110630287	110614027	110630287	+	ENST00000550703.6@TCTN1	ENST00000550703.6	protein_coding	110614027,110619836,110626362,110628767	110614402,110619956,110626492,110630287	Gene ID= ENSG00000204852.15 TPM= 1.93 Transcript Type= protein_coding
chr12	110614164	110649128	110614164	110649128	+	ENST00000397659.8@TCTN1	ENST00000397659.8	protein_coding	110614164,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110641024,110641542,110642249,110644967,110647196,110647749,110649043	110614402,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649128	Gene ID= ENSG00000204852.15 TPM= 1.93 Transcript Type= protein_coding
chr12	110648779	110689157	110648779	110689157	-	ENST00000242607.12@HVCN1	ENST00000242607.12	protein_coding	110689080,110688625,110683225,110661164,110655234,110651217,110650168,110648779	110689157,110688708,110683264,110661448,110655338,110651448,110650280,110649475	Gene ID= ENSG00000122986.13 TPM= 2.9 Transcript Type= protein_coding
chr12	110910819	110920577	110910819	110920577	-	ENST00000228841.12@MYL2	ENST00000228841.12	protein_coding	110920527,110919104,110915715,110914186,110913246,110913096,110910819	110920577,110919193,110915790,110914290,110913324,110913144,110911175	Gene ID= ENSG00000111245.14 TPM= 15686.68 Transcript Type= protein_coding
chr12	110918829	110920722	110918829	110920722	-	ENST00000546404.1@MYL2	ENST00000546404.1	protein_coding	110920527,110918829	110920722,110919193	Gene ID= ENSG00000111245.14 TPM= 2.9 Transcript Type= retained_intron
chr12	110936602	110937451	110936602	110937451	+	ENST00000331096.2@LINC01405	ENST00000331096.2	lincRNA	110936602,110937185	110936698,110937451	Gene ID= ENSG00000185847.7 TPM= 158.31 Transcript Type= lincRNA
chr12	111360679	111369095	111360679	111369095	-	transcript4638.chr12.nnic@FAM109A	transcript4638.chr12.nnic	protein_coding	111368912,111366113,111360679	111369095,111366257,111363463	Gene ID= ENSG00000198324.13 TPM= 17.38 Transcript Type= NA
chr12	111405948	111451623	111405948	111451623	+	ENST00000341259.6@SH2B3	ENST00000341259.6	protein_coding	111405948,111418119,111446753,111446942,111447125,111447330,111447656,111447983	111406277,111418877,111446854,111447033,111447219,111447544,111447827,111451623	Gene ID= ENSG00000111252.10 TPM= 28.96 Transcript Type= protein_coding
chr12	111642146	111685991	111642146	111685991	-	transcript4657.chr12.nnic@BRAP	transcript4657.chr12.nnic	protein_coding	111685711,111683146,111681637,111679151,111672661,111665639,111665112,111660600,111659207,111658736,111655566,111649939,111642146	111685991,111683307,111681835,111679340,111672774,111665787,111665173,111660675,111659345,111658845,111655655,111650042,111644562	Gene ID= ENSG00000089234.15 TPM= 1.93 Transcript Type= NA
chr12	111672229	111685935	111672229	111685935	-	transcript4667.chr12.nic@BRAP	transcript4667.chr12.nic	protein_coding	111685711,111683146,111681637,111679151,111672229	111685935,111683307,111681835,111679340,111672774	Gene ID= ENSG00000089234.15 TPM= 1.93 Transcript Type= NA
chr12	111642146	111685986	111642146	111685986	-	ENST00000419234.8@BRAP	ENST00000419234.8	protein_coding	111685711,111683146,111681637,111679151,111672661,111665639,111660600,111659207,111658736,111655566,111649939,111642146	111685986,111683307,111681835,111679340,111672774,111665787,111660675,111659345,111658845,111655655,111650042,111644562	Gene ID= ENSG00000089234.15 TPM= 26.06 Transcript Type= protein_coding
chr12	111686056	111757097	111686056	111757097	+	transcript4672.chr12.nnic@ACAD10	transcript4672.chr12.nnic	protein_coding	111686056,111692697,111702162,111705738,111709526,111712498,111715821,111721671,111727962,111729806,111733923,111736831,111744643,111747049,111747295,111748317,111749173,111753772,111755668,111756333	111686239,111692896,111702310,111705932,111709684,111712657,111715962,111721739,111728143,111729956,111734068,111737004,111745043,111747186,111747385,111748475,111749345,111753915,111755745,111757097	Gene ID= ENSG00000111271.14 TPM= 2.41 Transcript Type= NA
chr12	111686098	111757097	111686098	111757097	+	ENST00000313698.8@ACAD10	ENST00000313698.8	protein_coding	111686098,111692697,111702162,111705738,111709526,111712498,111715821,111721671,111727962,111729806,111733923,111736831,111744643,111746144,111747049,111747295,111748317,111749173,111753772,111755668,111756333	111686239,111692896,111702310,111705932,111709684,111712657,111715962,111721739,111728143,111729956,111734068,111737004,111745043,111746284,111747186,111747385,111748475,111749345,111753915,111755745,111757097	Gene ID= ENSG00000111271.14 TPM= 7.24 Transcript Type= protein_coding
chr12	111766958	111809980	111766958	111809980	+	transcript4679.chr12.nnic@ALDH2	transcript4679.chr12.nnic	protein_coding	111766958,111775610,111781918,111783158,111785267,111789823,111790434,111791306,111792061,111792598,111798078,111799906,111803859,111809543	111767096,111775720,111782022,111783298,111785346,111789934,111790562,111791419,111792163,111792782,111798242,111800063,111803973,111809980	Gene ID= ENSG00000111275.12 TPM= 45.37 Transcript Type= NA
chr12	111839770	111841906	111839770	111841906	-	ENST00000442119.5@MAPKAPK5-AS1	ENST00000442119.5	lincRNA	111841684,111840333,111839770	111841906,111840477,111840003	Gene ID= ENSG00000234608.7 TPM= 1.93 Transcript Type= lincRNA
chr12	111839767	111841902	111839767	111841902	-	ENST00000443596.1@MAPKAPK5-AS1	ENST00000443596.1	lincRNA	111841684,111839767	111841902,111840477	Gene ID= ENSG00000234608.7 TPM= 2.9 Transcript Type= lincRNA
chr12	111841978	111902238	111841978	111902238	+	ENST00000550735.6@MAPKAPK5	ENST00000550735.6	protein_coding	111841978,111865250,111866156,111867572,111868753,111870271,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967	111842769,111865323,111866231,111867669,111868861,111870360,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111902238	Gene ID= ENSG00000089022.13 TPM= 17.38 Transcript Type= protein_coding
chr12	111842067	111893414	111842067	111893414	+	transcript4712.chr12.nnic@MAPKAPK5	transcript4712.chr12.nnic	protein_coding	111842067,111865250,111866156,111867572,111868753,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967	111842769,111865323,111866231,111867669,111868861,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111893414	Gene ID= ENSG00000089022.13 TPM= 5.79 Transcript Type= NA
chr12	111931282	112013125	111931282	112013125	-	ENST00000550831.7@TMEM116	ENST00000550831.7	protein_coding	112013002,112005257,111991758,111943265,111938161,111937160,111936692,111933886,111932586,111931282	112013125,112005303,111991889,111943369,111938210,111937243,111936830,111934030,111932659,111931827	Gene ID= ENSG00000198270.12 TPM= 1.93 Transcript Type= protein_coding
chr12	112013316	112023451	112013316	112023451	+	ENST00000261735.3@ERP29	ENST00000261735.3	protein_coding	112013316,112019756,112022150	112013609,112019894,112023451	Gene ID= ENSG00000089248.6 TPM= 18.34 Transcript Type= protein_coding
chr12	112039262	112108796	112039262	112108796	-	transcript4744.chr12.nic@NAA25	transcript4744.chr12.nic	protein_coding	112108716,112093051,112090726,112087683,112081060,112078634,112078188,112075678,112074675,112071895,112068880,112061181,112060270,112054388,112053558,112049483,112048292,112047665,112043625,112043088,112042039,112040481,112039262	112108796,112093136,112090864,112087801,112081134,112078741,112078266,112075789,112074764,112072064,112068992,112061388,112060359,112054568,112053657,112049611,112048443,112047790,112043868,112043211,112042104,112040578,112039339	Gene ID= ENSG00000111300.9 TPM= 2.9 Transcript Type= NA
chr12	112039262	112108789	112039262	112108789	-	transcript4749.chr12.nnic@NAA25	transcript4749.chr12.nnic	protein_coding	112108716,112093051,112090726,112087683,112081060,112078634,112078188,112075678,112074675,112071895,112068880,112060270,112054388,112053558,112049483,112048292,112047665,112043625,112043088,112042039,112040481,112039262	112108789,112093136,112090864,112087801,112081134,112078741,112078266,112075789,112074764,112072064,112068992,112060359,112054568,112053657,112049611,112048443,112047790,112043868,112043211,112042104,112040578,112039339	Gene ID= ENSG00000111300.9 TPM= 3.86 Transcript Type= NA
chr12	112039262	112109433	112039262	112109433	-	transcript4750.chr12.nic@NAA25	transcript4750.chr12.nic	protein_coding	112108716,112093051,112090726,112087683,112081060,112078634,112078188,112075678,112074675,112071895,112068880,112061181,112060270,112054388,112053558,112048292,112047665,112043625,112043088,112042039,112040481,112039262	112109433,112093136,112090864,112087801,112081134,112078741,112078266,112075789,112074764,112072064,112068992,112061388,112060359,112054568,112053657,112048443,112047790,112043868,112043211,112042104,112040578,112039339	Gene ID= ENSG00000111300.9 TPM= 55.02 Transcript Type= NA
chr12	112039262	112108783	112039262	112108783	-	transcript4751.chr12.nnic@NAA25	transcript4751.chr12.nnic	protein_coding	112108716,112093051,112090726,112087683,112081060,112078634,112078188,112075678,112074675,112071895,112068880,112067075,112060270,112054388,112053558,112048292,112047665,112043625,112043088,112042039,112040481,112039262	112108783,112093136,112090864,112087801,112081134,112078741,112078266,112075789,112074764,112072064,112068992,112067201,112060359,112054568,112053657,112048443,112047790,112043868,112043211,112042104,112040578,112039339	Gene ID= ENSG00000111300.9 TPM= 1.93 Transcript Type= NA
chr12	112039262	112108785	112039262	112108785	-	transcript4754.chr12.nic@NAA25	transcript4754.chr12.nic	protein_coding	112108716,112093051,112090726,112081060,112078634,112078188,112075678,112074675,112071895,112068880,112061181,112060270,112054388,112053558,112048292,112047665,112043625,112043088,112042039,112040481,112039262	112108785,112093136,112090864,112081134,112078741,112078266,112075789,112074764,112072064,112068992,112061388,112060359,112054568,112053657,112048443,112047790,112043868,112043211,112042104,112040578,112039339	Gene ID= ENSG00000111300.9 TPM= 1.93 Transcript Type= NA
chr12	112039270	112108779	112039270	112108779	-	ENST00000551858.1@NAA25	ENST00000551858.1	protein_coding	112108716,112097241,112093051,112090726,112087683,112081060,112078634,112078188,112075678,112074675,112071895,112068880,112061181,112060270,112054388,112053558,112048292,112047665,112043625,112043088,112042039,112040481,112039270	112108779,112097441,112093136,112090864,112087801,112081134,112078741,112078266,112075789,112074764,112072064,112068992,112061388,112060359,112054568,112053657,112048443,112047790,112043868,112043211,112042104,112040578,112039339	Gene ID= ENSG00000111300.9 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	112125501	112153609	112125501	112153609	+	ENST00000412615.6@TRAFD1	ENST00000412615.6	protein_coding	112125501,112130511,112134738,112135013,112140819,112142089,112145586,112148074,112149751,112151801,112152427,112152735	112125618,112130569,112134873,112135066,112141224,112142295,112145662,112148304,112149871,112152140,112152499,112153609	Gene ID= ENSG00000135148.11 TPM= 30.89 Transcript Type= protein_coding
chr12	112125545	112153603	112125545	112153603	+	ENST00000257604.9@TRAFD1	ENST00000257604.9	protein_coding	112125545,112130511,112134738,112135013,112140819,112142089,112145586,112148074,112149751,112151801,112152427,112152735	112126149,112130569,112134873,112135066,112141224,112142295,112145662,112148304,112149871,112152140,112152499,112153603	Gene ID= ENSG00000135148.11 TPM= 14.48 Transcript Type= protein_coding
chr12	112405203	112409596	112405203	112409596	-	ENST00000424576.6@RPL6	ENST00000424576.6	protein_coding	112409411,112408420,112408240,112406747,112406294,112405853,112405203	112409596,112408656,112408338,112406890,112406342,112406037,112405376	Gene ID= ENSG00000089009.15 TPM= 21.56 Transcript Type= protein_coding
chr12	112405199	112409641	112405199	112409641	-	ENST00000202773.13@RPL6	ENST00000202773.13	protein_coding	112409587,112408420,112408240,112406747,112406294,112405853,112405199	112409641,112408656,112408338,112406890,112406342,112406037,112405376	Gene ID= ENSG00000089009.15 TPM= 489.73 Transcript Type= protein_coding
chr12	112418875	112509913	112418875	112509913	+	transcript4775.chr12.nic@PTPN11	transcript4775.chr12.nic	protein_coding	112418875,112446276,112450318,112453195,112454564,112455950,112472944,112477651,112477857,112482074,112486463,112488443,112489024,112502144,112504695,112505825	112419125,112446398,112450512,112453387,112454680,112456063,112473040,112477730,112478015,112482205,112486629,112488510,112489175,112502256,112504796,112509913	Gene ID= ENSG00000179295.17 TPM= 10.2 Transcript Type= NA
chr12	112418875	112509913	112418875	112509913	+	transcript4783.chr12.nnic@PTPN11	transcript4783.chr12.nnic	protein_coding	112418875,112446276,112450318,112453195,112454564,112472944,112477651,112477857,112482074,112486463,112488443,112489024,112502144,112504695,112505825	112419125,112446398,112450512,112453387,112454680,112473040,112477730,112478015,112482205,112486629,112488510,112489175,112502256,112504796,112509913	Gene ID= ENSG00000179295.17 TPM= 5.79 Transcript Type= NA
chr12	112418914	112509913	112418914	112509913	+	ENST00000351677.6@PTPN11	ENST00000351677.6	protein_coding	112418914,112446276,112450318,112453195,112454564,112455950,112472944,112477651,112477857,112482074,112486475,112488443,112489024,112502144,112504695,112505825	112419125,112446398,112450512,112453387,112454680,112456063,112473040,112477730,112478015,112482205,112486629,112488510,112489175,112502256,112504796,112509913	Gene ID= ENSG00000179295.17 TPM= 145.35 Transcript Type= protein_coding
chr12	113158495	113185490	113158495	113185490	-	transcript4802.chr12.nnic@DDX54	transcript4802.chr12.nnic	protein_coding	113185278,113180929,113179935,113179143,113178977,113177052,113176840,113175036,113174875,113174640,113172353,113169770,113165644,113164067,113163132,113162932,113161893,113161270,113158495	113185490,113181058,113180005,113179331,113179026,113177093,113176935,113175157,113174936,113174771,113172563,113169904,113165717,113164285,113163274,113163045,113161997,113161382,113159109	Gene ID= ENSG00000123064.12 TPM= 13.03 Transcript Type= NA
chr12	113185542	113192361	113185542	113192361	+	ENST00000552495.1@RITA1	ENST00000552495.1	protein_coding	113185542,113186683,113191310	113186021,113187048,113192361	Gene ID= ENSG00000139405.15 TPM= 4.83 Transcript Type= protein_coding
chr12	113298781	113335152	113298781	113335152	-	transcript4812.chr12.nnic@SLC8B1	transcript4812.chr12.nnic	protein_coding	113334443,113332749,113321196,113321056,113320850,113320581,113320331,113318964,113316942,113316526,113315335,113310234,113308221,113307691,113306495,113304321,113298781	113335152,113332960,113321348,113321108,113320907,113320686,113320498,113319071,113317001,113316656,113315476,113310355,113308338,113307844,113306575,113304385,113299974	Gene ID= ENSG00000089060.11 TPM= 3.38 Transcript Type= NA
chr12	113298781	113335152	113298781	113335152	-	transcript4813.chr12.nic@SLC8B1	transcript4813.chr12.nic	protein_coding	113334443,113332723,113321196,113321056,113320850,113320581,113320331,113318964,113316942,113316526,113315335,113310234,113307691,113306495,113304321,113298781	113335152,113332960,113321348,113321108,113320907,113320686,113320498,113319071,113317001,113316656,113315476,113310355,113307844,113306575,113304385,113299974	Gene ID= ENSG00000089060.11 TPM= 11.1 Transcript Type= NA
chr12	113358570	113391625	113358570	113391625	+	ENST00000280800.4@PLBD2	ENST00000280800.4	protein_coding	113358570,113369116,113372649,113374474,113374793,113380745,113384105,113384851,113385212,113386937,113387744,113388459	113358890,113369209,113372807,113374574,113375007,113380842,113384265,113384946,113385283,113387089,113387906,113391625	Gene ID= ENSG00000151176.7 TPM= 6.76 Transcript Type= protein_coding
chr12	113392445	113403888	113392445	113403888	-	ENST00000257549.8@SDS	ENST00000257549.8	protein_coding	113403768,113399556,113399112,113398707,113398515,113397165,113393892,113392445	113403888,113399710,113399151,113398846,113398606,113397392,113394016,113393149	Gene ID= ENSG00000135094.10 TPM= 2.9 Transcript Type= protein_coding
chr12	113822054	113966337	113822054	113966337	-	transcript4826.chr12.nnic@RBM19	transcript4826.chr12.nnic	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113840011,113838610,113838195,113823209,113822054	113966337,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113840100,113838693,113838269,113823321,113822646	Gene ID= ENSG00000122965.10 TPM= 3.38 Transcript Type= NA
chr12	113822054	113966337	113822054	113966337	-	transcript4827.chr12.nnic@RBM19	transcript4827.chr12.nnic	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113838610,113838195,113823209,113822054	113966337,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113838693,113838269,113823321,113822646	Gene ID= ENSG00000122965.10 TPM= 5.31 Transcript Type= NA
chr12	113816734	113966337	113816734	113966337	-	transcript4832.chr12.nnic@RBM19	transcript4832.chr12.nnic	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113818103,113816734	113966337,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113818186,113817361	Gene ID= ENSG00000122965.10 TPM= 5.31 Transcript Type= NA
chr12	113822057	113966371	113822057	113966371	-	ENST00000261741.9@RBM19	ENST00000261741.9	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113822057	113966371,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321	Gene ID= ENSG00000122965.10 TPM= 13.03 Transcript Type= protein_coding
chr12	113939323	113966337	113939323	113966337	-	transcript4853.chr12.nic@RBM19	transcript4853.chr12.nic	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939323	113966337,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160	Gene ID= ENSG00000122965.10 TPM= 1.93 Transcript Type= NA
chr12	113816742	113966306	113816742	113966306	-	ENST00000545145.6@RBM19	ENST00000545145.6	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113816742	113966306,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113818186	Gene ID= ENSG00000122965.10 TPM= 4.83 Transcript Type= protein_coding
chr12	113822054	113966310	113822054	113966310	-	ENST00000392561.7@RBM19	ENST00000392561.7	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113822054	113966310,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113822646	Gene ID= ENSG00000122965.10 TPM= 32.82 Transcript Type= protein_coding
chr12	114670939	114672301	114670939	114672301	-	transcript4859.chr12.nnic@NA	transcript4859.chr12.nnic	NA	114670939	114672301	Gene ID= novel_gene_chr12_4860 TPM= 1.93 Transcript Type= NA
chr12	115958576	115958932	115958576	115958932	-	transcript4863.chr12.nnic@NA	transcript4863.chr12.nnic	NA	115958576	115958932	Gene ID= novel_gene_chr12_4864 TPM= 1.93 Transcript Type= NA
chr12	116717070	116738070	116717070	116738070	-	ENST00000547630.1@C12orf49	ENST00000547630.1	protein_coding	116737790,116720296,116719763,116717070	116738070,116720447,116719876,116717893	Gene ID= ENSG00000111412.5 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr12	116715791	116738084	116715791	116738084	-	transcript4872.chr12.nnic@C12orf49	transcript4872.chr12.nnic	protein_coding	116737790,116719763,116715791	116738084,116719876,116717893	Gene ID= ENSG00000111412.5 TPM= 1.93 Transcript Type= NA
chr12	116817905	116819590	116817905	116819590	-	transcript4874.chr12.nnic@NA	transcript4874.chr12.nnic	NA	116817905	116819590	Gene ID= novel_gene_chr12_4875 TPM= 2.9 Transcript Type= NA
chr12	117038924	117099469	117038924	117099469	-	ENST00000335209.11@TESC	ENST00000335209.11	protein_coding	117099225,117075271,117056806,117049019,117046777,117046559,117041947,117038924	117099469,117075340,117056886,117049158,117046838,117046666,117041994,117039210	Gene ID= ENSG00000088992.17 TPM= 6.76 Transcript Type= protein_coding
chr12	117141988	117190531	117141988	117190531	-	ENST00000622495.4@FBXO21	ENST00000622495.4	protein_coding	117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117141988	117190531,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158063,117155948,117146277	Gene ID= ENSG00000135108.14 TPM= 52.13 Transcript Type= protein_coding
chr12	117145068	117190518	117145068	117190518	-	transcript4885.chr12.nic@FBXO21	transcript4885.chr12.nic	protein_coding	117190218,117189227,117186477,117177520,117174651,117174205,117172471,117165485,117157873,117155791,117145068	117190518,117189362,117186571,117177641,117174797,117174341,117172607,117165617,117158084,117155948,117146277	Gene ID= ENSG00000135108.14 TPM= 3.86 Transcript Type= NA
chr12	117143781	117190471	117143781	117190471	-	ENST00000427718.6@FBXO21	ENST00000427718.6	protein_coding	117190327,117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117143781	117190471,117190277,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158063,117155948,117146277	Gene ID= ENSG00000135108.14 TPM= 1.93 Transcript Type= protein_coding
chr12	117145068	117190456	117145068	117190456	-	ENST00000330622.9@FBXO21	ENST00000330622.9	protein_coding	117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117145068	117190456,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158084,117155948,117146277	Gene ID= ENSG00000135108.14 TPM= 76.26 Transcript Type= protein_coding
chr12	117149176	117151289	117149176	117151289	-	transcript4888.chr12.nnic@NA	transcript4888.chr12.nnic	NA	117149176	117151289	Gene ID= novel_gene_chr12_4889 TPM= 1.93 Transcript Type= NA
chr12	118032907	118061190	118032907	118061190	-	ENST00000315436.7@WSB2	ENST00000315436.7	protein_coding	118061036,118052310,118043133,118042841,118038288,118036338,118035214,118034986,118032907	118061190,118052478,118043377,118042972,118038388,118036510,118035324,118035093,118034358	Gene ID= ENSG00000176871.8 TPM= 123.56 Transcript Type= protein_coding
chr12	118101599	118104358	118101599	118104358	-	transcript4904.chr12.nnic@VSIG10	transcript4904.chr12.nnic	protein_coding	118104014,118102989,118101599	118104358,118103170,118102267	Gene ID= ENSG00000176834.13 TPM= 1.93 Transcript Type= NA
chr12	118135858	118145584	118135858	118145584	+	ENST00000261313.2@PEBP1	ENST00000261313.2	protein_coding	118135858,118138039,118139451,118144586	118136344,118138148,118139551,118145584	Gene ID= ENSG00000089220.4 TPM= 659.31 Transcript Type= protein_coding
chr12	118246084	118246962	118246084	118246962	+	ENST00000488803.1@AC026366.1	ENST00000488803.1	processed_pseudogene	118246084	118246962	Gene ID= ENSG00000240342.3 TPM= 15.44 Transcript Type= processed_pseudogene
chr12	118376380	118418031	118376380	118418031	+	ENST00000543473.1@SUDS3	ENST00000543473.1	protein_coding	118376380,118380162,118384012,118386114,118389927,118391126,118400659,118401759,118401983,118403412,118411073,118414335	118376833,118380231,118384067,118386185,118389946,118391282,118400754,118401820,118402004,118403517,118411157,118418031	Gene ID= ENSG00000111707.11 TPM= 8.69 Transcript Type= protein_coding
chr12	118376512	118417722	118376512	118417722	+	transcript4922.chr12.nnic@SUDS3	transcript4922.chr12.nnic	protein_coding	118376512,118380162,118386114,118389927,118391126,118400659,118401759,118401983,118403412,118411073,118414335	118376833,118380231,118386185,118389946,118391282,118400754,118401820,118402004,118403517,118411157,118417722	Gene ID= ENSG00000111707.11 TPM= 2.9 Transcript Type= NA
chr12	119178642	119194748	119178642	119194748	+	ENST00000281938.6@HSPB8	ENST00000281938.6	protein_coding	119178642,119187025,119193699	119179679,119187088,119194748	Gene ID= ENSG00000152137.6 TPM= 2878.56 Transcript Type= protein_coding
chr12	119593755	119633062	119593755	119633062	+	transcript4960.chr12.nnic@TMEM233	transcript4960.chr12.nnic	protein_coding	119593755,119629736,119631545	119594034,119629872,119633062	Gene ID= ENSG00000224982.3 TPM= 2.9 Transcript Type= NA
chr12	119593459	119643066	119593459	119643066	+	ENST00000426426.2@TMEM233	ENST00000426426.2	protein_coding	119593459,119629736,119640699	119594034,119629872,119643066	Gene ID= ENSG00000224982.3 TPM= 36.68 Transcript Type= protein_coding
chr12	119593767	119642812	119593767	119642812	+	transcript4969.chr12.nnic@TMEM233	transcript4969.chr12.nnic	protein_coding	119593767,119629736,119641994	119594034,119629872,119642812	Gene ID= ENSG00000224982.3 TPM= 2.9 Transcript Type= NA
chr12	119667753	119681630	119667753	119681630	+	ENST00000229328.9@PRKAB1	ENST00000229328.9	protein_coding	119667753,119672301,119673964,119674340,119676537,119679933,119680248	119668403,119672464,119674057,119674454,119676670,119680001,119681630	Gene ID= ENSG00000111725.10 TPM= 20.27 Transcript Type= protein_coding
chr12	120095095	120116839	120095095	120116839	-	ENST00000229340.9@RAB35	ENST00000229340.9	protein_coding	120116599,120108417,120103826,120099030,120098811,120095095	120116839,120108467,120103949,120099154,120098935,120097373	Gene ID= ENSG00000111737.11 TPM= 10.62 Transcript Type= protein_coding
chr12	120116907	120119000	120116907	120119000	+	ENST00000611079.1@AC004812.2	ENST00000611079.1	antisense_RNA	120116907	120119000	Gene ID= ENSG00000277283.1 TPM= 1.93 Transcript Type= antisense_RNA
chr12	120127203	120194710	120127203	120194710	-	ENST00000300648.6@GCN1	ENST00000300648.6	protein_coding	120194680,120190298,120184824,120184112,120183569,120178852,120178625,120177684,120177447,120176143,120175746,120175162,120174071,120173653,120170169,120168208,120164646,120164336,120163070,120162847,120161880,120161490,120160142,120159825,120158460,120157849,120156912,120156461,120155592,120155241,120154970,120153744,120153213,120151145,120149922,120149606,120148167,120147052,120145262,120144923,120144639,120144306,120142824,120142507,120140859,120138695,120138323,120137901,120137545,120137206,120136502,120134533,120134291,120131926,120131185,120130646,120129276,120127203	120194710,120190400,120184887,120184243,120183677,120178950,120178759,120177752,120177555,120176217,120175874,120175212,120174169,120173826,120170321,120168300,120164721,120164495,120163259,120162971,120162058,120161583,120160255,120160023,120158615,120158030,120156992,120156604,120155719,120155430,120155040,120153909,120153407,120151391,120150043,120149720,120148346,120147272,120145330,120145061,120144835,120144448,120142941,120142722,120141023,120138856,120138415,120138044,120137814,120137319,120136732,120134726,120134405,120132022,120131333,120130753,120129494,120127974	Gene ID= ENSG00000089154.10 TPM= 20.27 Transcript Type= protein_coding
chr12	120196686	120201211	120196686	120201211	-	ENST00000392514.8@RPLP0	ENST00000392514.8	protein_coding	120201083,120200730,120199310,120199118,120198854,120198554,120197322,120196686	120201211,120200831,120199485,120199205,120199000,120198739,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 1642.7 Transcript Type= protein_coding
chr12	120196702	120201107	120196702	120201107	-	ENST00000313104.9@RPLP0	ENST00000313104.9	protein_coding	120201083,120200730,120199310,120199118,120198854,120197322,120196702	120201107,120200831,120199485,120199205,120199000,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 146.71 Transcript Type= protein_coding
chr12	120196708	120201110	120196708	120201110	-	ENST00000549098.5@RPLP0	ENST00000549098.5	protein_coding	120201083,120200719,120199310,120199118,120198854,120198554,120197322,120196708	120201110,120200831,120199485,120199205,120199000,120198739,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 148.9 Transcript Type= nonsense_mediated_decay
chr12	120201291	120212919	120201291	120212919	+	ENST00000542265.5@PXN-AS1	ENST00000542265.5	antisense_RNA	120201291,120206545,120209839,120212375	120201426,120206621,120209934,120212919	Gene ID= ENSG00000255857.5 TPM= 1.93 Transcript Type= antisense_RNA
chr12	120218043	120265766	120218043	120265766	-	transcript5011.chr12.nic@PXN	transcript5011.chr12.nic	protein_coding	120265617,120224151,120223718,120222863,120222549,120218043	120265766,120224377,120223833,120222999,120222750,120221758	Gene ID= ENSG00000089159.16 TPM= 13.51 Transcript Type= NA
chr12	120438090	120440742	120438090	120440742	+	ENST00000229379.2@COX6A1	ENST00000229379.2	protein_coding	120438090,120438379,120440454	120438229,120438521,120440742	Gene ID= ENSG00000111775.2 TPM= 24.13 Transcript Type= protein_coding
chr12	120443961	120446412	120443961	120446412	-	ENST00000546954.1@TRIAP1	ENST00000546954.1	protein_coding	120446226,120443961	120446412,120444955	Gene ID= ENSG00000170855.3 TPM= 44.4 Transcript Type= protein_coding
chr12	120446438	120463749	120446438	120463749	+	ENST00000551765.5@GATC	ENST00000551765.5	protein_coding	120446438,120446657,120457076,120459907	120446561,120446829,120457179,120463749	Gene ID= ENSG00000257218.5 TPM= 2.9 Transcript Type= protein_coding
chr12	120448962	120450230	120448962	120450230	-	transcript5026.chr12.nnic@NA	transcript5026.chr12.nnic	NA	120448962	120450230	Gene ID= novel_gene_chr12_5027 TPM= 1.93 Transcript Type= NA
chr12	120461668	120469793	120461668	120469793	-	ENST00000229390.7@SRSF9	ENST00000229390.7	protein_coding	120469422,120465627,120463950,120461668	120469793,120465787,120464122,120462162	Gene ID= ENSG00000111786.8 TPM= 51.64 Transcript Type= protein_coding
chr12	120461668	120469751	120461668	120469751	-	transcript5021.chr12.nic@SRSF9	transcript5021.chr12.nic	protein_coding	120469422,120463950,120461668	120469751,120465787,120462162	Gene ID= ENSG00000111786.8 TPM= 5.31 Transcript Type= NA
chr12	120469850	120498493	120469850	120498493	+	ENST00000392509.6@DYNLL1	ENST00000392509.6	protein_coding	120469850,120496416,120498073	120470104,120496553,120498493	Gene ID= ENSG00000088986.10 TPM= 1.61 Transcript Type= protein_coding
chr12	120496056	120498493	120496056	120498493	+	ENST00000242577.10@DYNLL1	ENST00000242577.10	protein_coding	120496056,120496416,120498073	120496216,120496553,120498493	Gene ID= ENSG00000088986.10 TPM= 18.02 Transcript Type= protein_coding
chr12	120496091	120498491	120496091	120498491	+	ENST00000392508.2@DYNLL1	ENST00000392508.2	protein_coding	120496091,120496402,120498073	120496216,120496553,120498491	Gene ID= ENSG00000088986.10 TPM= 2.58 Transcript Type= protein_coding
chr12	120487525	120490864	120487525	120490864	-	transcript5034.chr12.nnic@NA	transcript5034.chr12.nnic	NA	120487525	120490864	Gene ID= novel_gene_chr12_5035 TPM= 1.93 Transcript Type= NA
chr12	120490328	120495940	120490328	120495940	-	ENST00000500741.2@NRAV	ENST00000500741.2	antisense_RNA	120495823,120490328	120495940,120492110	Gene ID= ENSG00000248008.2 TPM= 5.79 Transcript Type= antisense_RNA
chr12	120503274	120529164	120503274	120529164	-	transcript5107.chr12.nic@COQ5	transcript5107.chr12.nic	protein_coding	120528940,120526457,120522214,120516567,120510017,120504895,120503970,120503274	120529164,120526546,120522363,120516788,120510123,120504983,120504081,120503885	Gene ID= ENSG00000110871.14 TPM= 10.94 Transcript Type= NA
chr12	120503274	120529182	120503274	120529182	-	ENST00000288532.10@COQ5	ENST00000288532.10	protein_coding	120528940,120522214,120516567,120510017,120504895,120503970,120503274	120529182,120522363,120516788,120510123,120504983,120504081,120503885	Gene ID= ENSG00000110871.14 TPM= 48.58 Transcript Type= protein_coding
chr12	120503274	120529164	120503274	120529164	-	transcript5111.chr12.nic@COQ5	transcript5111.chr12.nic	protein_coding	120528940,120516567,120510017,120504895,120503970,120503274	120529164,120516788,120510123,120504983,120504081,120503885	Gene ID= ENSG00000110871.14 TPM= 5.15 Transcript Type= NA
chr12	120534351	120577594	120534351	120577594	+	ENST00000325954.8@RNF10	ENST00000325954.8	protein_coding	120534351,120546405,120552499,120554718,120557282,120557546,120560726,120562945,120563347,120563810,120565072,120565428,120566825,120571191,120575631,120575792,120576590	120534968,120546601,120552698,120554808,120557466,120557682,120560886,120563070,120563623,120563943,120565189,120565529,120566980,120571291,120575688,120575950,120577594	Gene ID= ENSG00000022840.15 TPM= 120.77 Transcript Type= protein_coding
chr12	120534812	120576886	120534812	120576886	+	ENST00000413266.6@RNF10	ENST00000413266.6	protein_coding	120534812,120546405,120552499,120554718,120557282,120557546,120560726,120562945,120563332,120563810,120565072,120565428,120566825,120571191,120575631,120575792,120576590	120534968,120546601,120552698,120554808,120557466,120557682,120560886,120563070,120563623,120563943,120565189,120565529,120566980,120571291,120575688,120575950,120576886	Gene ID= ENSG00000022840.15 TPM= 80.45 Transcript Type= protein_coding
chr12	120579045	120581405	120579045	120581405	-	transcript5122.chr12.nic@POP5	transcript5122.chr12.nic	protein_coding	120581343,120579514,120579045	120581405,120581257,120579412	Gene ID= ENSG00000167272.10 TPM= 2.9 Transcript Type= NA
chr12	120579045	120581405	120579045	120581405	-	transcript5123.chr12.nnic@POP5	transcript5123.chr12.nnic	protein_coding	120581343,120580996,120579045	120581405,120581257,120579412	Gene ID= ENSG00000167272.10 TPM= 1.93 Transcript Type= NA
chr12	120579045	120581398	120579045	120581398	-	ENST00000357500.4@POP5	ENST00000357500.4	protein_coding	120581343,120581115,120579774,120579514,120579045	120581398,120581257,120579923,120579597,120579412	Gene ID= ENSG00000167272.10 TPM= 13.51 Transcript Type= protein_coding
chr12	120686869	120701864	120686869	120701864	+	ENST00000228506.7@MLEC	ENST00000228506.7	protein_coding	120686869,120694091,120694824,120695095,120696316	120687531,120694269,120695000,120695152,120701864	Gene ID= ENSG00000110917.7 TPM= 69.5 Transcript Type= protein_coding
chr12	120710435	120723640	120710435	120723640	+	ENST00000344651.4@UNC119B	ENST00000344651.4	protein_coding	120710435,120713274,120716628,120716870,120719920	120710718,120713387,120716739,120717042,120723640	Gene ID= ENSG00000175970.10 TPM= 3.86 Transcript Type= protein_coding
chr12	120725735	120740008	120725735	120740008	+	ENST00000242592.8@ACADS	ENST00000242592.8	protein_coding	120725735,120727026,120736986,120737356,120737837,120738280,120738533,120738820,120739140,120739296	120725931,120727189,120737135,120737467,120737988,120738450,120738670,120738915,120739196,120740008	Gene ID= ENSG00000122971.8 TPM= 445.01 Transcript Type= protein_coding
chr12	120762510	120904371	120762510	120904371	-	ENST00000353487.6@SPPL3	ENST00000353487.6	protein_coding	120903845,120810809,120791469,120784474,120783674,120782655,120768953,120768325,120767394,120766263,120762510	120904371,120810886,120791557,120784593,120783752,120782767,120769059,120768488,120767593,120766372,120765070	Gene ID= ENSG00000157837.15 TPM= 2.9 Transcript Type= protein_coding
chr12	120899616	120901609	120899616	120901609	+	transcript5164.chr12.nnic@NA	transcript5164.chr12.nnic	NA	120899616	120901609	Gene ID= novel_gene_chr12_5165 TPM= 7.72 Transcript Type= NA
chr12	121000486	121016487	121000486	121016487	-	ENST00000288757.7@C12orf43	ENST00000288757.7	protein_coding	121016330,121011104,121010828,121006321,121005003,121000486	121016487,121011146,121010926,121006394,121005093,121004489	Gene ID= ENSG00000157895.11 TPM= 11.58 Transcript Type= protein_coding
chr12	121209857	121234106	121209857	121234106	+	ENST00000337233.8@P2RX4	ENST00000337233.8	protein_coding	121209857,121217134,121221913,121222094,121222947,121228533,121228725,121228963,121232414,121232611,121232997,121233523	121210298,121217281,121221984,121222166,121223043,121228613,121228866,121229099,121232507,121232676,121233092,121234106	Gene ID= ENSG00000135124.14 TPM= 8.69 Transcript Type= protein_coding
chr12	121308357	121352462	121308357	121352462	-	ENST00000261819.7@ANAPC5	ENST00000261819.7	protein_coding	121352134,121347802,121346896,121345839,121342003,121337291,121335533,121331347,121330583,121328316,121327096,121320385,121319697,121318501,121318277,121309701,121308357	121352462,121347881,121347005,121346031,121342069,121337392,121335723,121331428,121330672,121328497,121327231,121320459,121319818,121318608,121318424,121309863,121308691	Gene ID= ENSG00000089053.12 TPM= 124.53 Transcript Type= protein_coding
chr12	121308357	121352388	121308357	121352388	-	ENST00000541887.5@ANAPC5	ENST00000541887.5	protein_coding	121352134,121347802,121346896,121345839,121342003,121337291,121335533,121331347,121330583,121328316,121327096,121320385,121319697,121318501,121318277,121309701,121308357	121352388,121347881,121347005,121346031,121342069,121337392,121335723,121331428,121330672,121328458,121327231,121320459,121319818,121318608,121318424,121309863,121308691	Gene ID= ENSG00000089053.12 TPM= 34.27 Transcript Type= protein_coding
chr12	121400119	121424348	121400119	121424348	+	ENST00000392465.7@RNF34	ENST00000392465.7	protein_coding	121400119,121402742,121416159,121417504,121420242,121420577,121423386	121400218,121402807,121416377,121417911,121420334,121420778,121424348	Gene ID= ENSG00000170633.16 TPM= 4.83 Transcript Type= protein_coding
chr12	121400041	121424351	121400041	121424351	+	ENST00000361234.9@RNF34	ENST00000361234.9	protein_coding	121400041,121416159,121417504,121420242,121420577,121423386	121400218,121416377,121417911,121420334,121420778,121424351	Gene ID= ENSG00000170633.16 TPM= 24.13 Transcript Type= protein_coding
chr12	121626483	121642040	121626483	121642040	+	transcript5211.chr12.nnic@ORAI1	transcript5211.chr12.nnic	protein_coding	121626483,121641041,121641734	121627050,121641667,121642040	Gene ID= ENSG00000276045.2 TPM= 1.93 Transcript Type= NA
chr12	121626499	121642040	121626499	121642040	+	transcript5214.chr12.nnic@ORAI1	transcript5214.chr12.nnic	protein_coding	121626499,121641041	121626933,121642040	Gene ID= ENSG00000276045.2 TPM= 2.9 Transcript Type= NA
chr12	121626550	121642677	121626550	121642677	+	ENST00000617316.1@ORAI1	ENST00000617316.1	protein_coding	121626550,121641041	121627050,121642677	Gene ID= ENSG00000276045.2 TPM= 4.83 Transcript Type= protein_coding
chr12	121712752	121778956	121712752	121778956	+	ENST00000342607.10@TMEM120B	ENST00000342607.10	protein_coding	121712752,121743629,121748326,121750380,121752128,121761649,121770907,121771488,121773421,121774658,121775062,121775609,121778077	121712964,121743747,121748442,121750439,121752223,121761738,121770972,121771549,121773513,121774722,121775130,121776444,121778956	Gene ID= ENSG00000188735.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	121712754	121753591	121712754	121753591	+	transcript5222.chr12.nic@TMEM120B	transcript5222.chr12.nic	protein_coding	121712754,121743629,121748326,121750380,121752128	121712964,121743747,121748442,121750439,121753591	Gene ID= ENSG00000188735.12 TPM= 2.9 Transcript Type= NA
chr12	121722102	121723004	121722102	121723004	-	transcript5223.chr12.nnic@NA	transcript5223.chr12.nnic	NA	121722102	121723004	Gene ID= novel_gene_chr12_5224 TPM= 1.93 Transcript Type= NA
chr12	121795267	121800981	121795267	121800981	-	transcript5228.chr12.nic@LINC01089	transcript5228.chr12.nic	lincRNA	121799847,121795267	121800981,121796242	Gene ID= ENSG00000212694.8 TPM= 1.93 Transcript Type= NA
chr12	121795552	121797046	121795552	121797046	+	transcript5229.chr12.nnic@NA	transcript5229.chr12.nnic	NA	121795552	121797046	Gene ID= novel_gene_chr12_5230 TPM= 3.86 Transcript Type= NA
chr12	121839530	121863596	121839530	121863596	-	ENST00000543163.5@HPD	ENST00000543163.5	protein_coding	121863532,121858925,121858687,121857757,121857328,121856583,121856324,121854703,121849687,121848999,121847052,121846862,121843710,121839932,121839530	121863596,121859191,121858713,121857819,121857432,121856625,121856406,121854792,121849790,121849076,121847214,121846933,121843832,121840048,121839838	Gene ID= ENSG00000158104.11 TPM= 2.9 Transcript Type= protein_coding
chr12	121888799	121916644	121888799	121916644	+	transcript5233.chr12.nnic@PSMD9	transcript5233.chr12.nnic	protein_coding	121888799,121890513,121894739,121899634,121903006,121915856,121916284	121888994,121890610,121894841,121899845,121903107,121915944,121916644	Gene ID= ENSG00000110801.13 TPM= 7.72 Transcript Type= NA
chr12	121888731	121918297	121888731	121918297	+	ENST00000541212.5@PSMD9	ENST00000541212.5	protein_coding	121888731,121894739,121899634,121903006,121915856,121916284	121888994,121894841,121899845,121903107,121915944,121918297	Gene ID= ENSG00000110801.13 TPM= 54.06 Transcript Type= protein_coding
chr12	121888771	121917863	121888771	121917863	+	ENST00000261817.6@PSMD9	ENST00000261817.6	protein_coding	121888771,121894739,121899634,121903006,121915859,121916284	121888994,121894841,121899845,121903107,121915944,121917863	Gene ID= ENSG00000110801.13 TPM= 7.72 Transcript Type= protein_coding
chr12	122021886	122060905	122021886	122060905	+	ENST00000261822.4@BCL7A	ENST00000261822.4	protein_coding	122021886,122030700,122035331,122043886,122054805,122059092	122022183,122030781,122035427,122044053,122054926,122060905	Gene ID= ENSG00000110987.8 TPM= 2.9 Transcript Type= protein_coding
chr12	122019422	122062044	122019422	122062044	+	ENST00000538010.5@BCL7A	ENST00000538010.5	protein_coding	122019422,122030700,122035331,122043886,122054805,122059092	122022183,122030781,122035427,122044053,122054989,122062044	Gene ID= ENSG00000110987.8 TPM= 5.79 Transcript Type= protein_coding
chr12	122078722	122147347	122078722	122147347	+	ENST00000319080.11@MLXIP	ENST00000319080.11	protein_coding	122078722,122127256,122127883,122129137,122129588,122129941,122130844,122132292,122133348,122135224,122135489,122137469,122138194,122138424,122138815,122140954,122141691	122079266,122127362,122127968,122129226,122129629,122130112,122130933,122132383,122133987,122135345,122135666,122137590,122138295,122138551,122138938,122141083,122147347	Gene ID= ENSG00000175727.13 TPM= 118.25 Transcript Type= protein_coding
chr12	122133773	122143815	122133773	122143815	+	transcript5252.chr12.nnic@MLXIP	transcript5252.chr12.nnic	protein_coding	122133773,122135236,122135489,122137469,122138194,122138424,122138815,122140954,122141691	122133987,122135345,122135666,122137590,122138295,122138551,122138938,122141083,122143815	Gene ID= ENSG00000175727.13 TPM= 42.96 Transcript Type= NA
chr12	122131914	122133622	122131914	122133622	-	transcript5256.chr12.nnic@NA	transcript5256.chr12.nnic	NA	122131914	122133622	Gene ID= novel_gene_chr12_5257 TPM= 30.89 Transcript Type= NA
chr12	122207769	122226052	122207769	122226052	-	transcript5258.chr12.nnic@DIABLO	transcript5258.chr12.nnic	protein_coding	122225965,122224512,122218266,122216759,122216488,122209773,122207769	122226052,122224644,122218397,122216869,122216584,122209858,122208577	Gene ID= ENSG00000184047.16 TPM= 1.93 Transcript Type= NA
chr12	122207774	122226052	122207774	122226052	-	transcript5259.chr12.nic@DIABLO	transcript5259.chr12.nic	protein_coding	122225965,122224512,122218266,122216759,122216488,122209697,122207774	122226052,122224644,122218397,122216869,122216584,122209858,122208577	Gene ID= ENSG00000184047.16 TPM= 1.93 Transcript Type= NA
chr12	122207669	122227534	122207669	122227534	-	ENST00000443649.7@DIABLO	ENST00000443649.7	protein_coding	122227356,122225965,122224512,122218266,122216759,122216488,122207669	122227534,122226653,122224644,122218397,122216869,122216584,122208577	Gene ID= ENSG00000184047.16 TPM= 3.86 Transcript Type= protein_coding
chr12	122207774	122226052	122207774	122226052	-	ENST00000342392.3@DIABLO	ENST00000342392.3	protein_coding	122225965,122224645,122218266,122216759,122216488,122207774	122226052,122224748,122218397,122216869,122216584,122208577	Gene ID= ENSG00000184047.16 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr12	122229564	122266521	122229564	122266521	-	ENST00000267199.8@VPS33A	ENST00000267199.8	protein_coding	122266307,122264134,122263572,122261261,122250983,122249871,122244569,122242382,122239878,122238587,122235786,122232800,122229564	122266521,122264199,122263699,122261447,122251099,122250045,122244762,122242508,122239945,122238724,122235923,122232968,122232427	Gene ID= ENSG00000139719.9 TPM= 9.65 Transcript Type= protein_coding
chr12	122231547	122266439	122231547	122266439	-	transcript5281.chr12.nic@VPS33A	transcript5281.chr12.nic	protein_coding	122266307,122264134,122263572,122261261,122250983,122249871,122239878,122238587,122235786,122232800,122231547	122266439,122264199,122263699,122261447,122251099,122250045,122239945,122238724,122235923,122232968,122232427	Gene ID= ENSG00000139719.9 TPM= 1.93 Transcript Type= NA
chr12	122271434	122399996	122271434	122399996	-	transcript5290.chr12.nic@CLIP1	transcript5290.chr12.nic	protein_coding	122399781,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122351111,122347375,122340753,122336632,122334648,122334027,122332987,122328261,122327947,122319232,122316749,122309762,122288489,122279028,122278792,122278154,122274038,122271434	122399996,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122351143,122347479,122341697,122336748,122334705,122334110,122333143,122328426,122328162,122319348,122316855,122309882,122288541,122279145,122278942,122278203,122274162,122273100	Gene ID= ENSG00000130779.19 TPM= 26.67 Transcript Type= NA
chr12	122271434	122422569	122271434	122422569	-	ENST00000620786.4@CLIP1	ENST00000620786.4	protein_coding	122422521,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122351111,122347375,122340753,122336632,122334648,122334027,122332987,122328261,122327947,122319232,122316749,122309762,122288489,122279028,122278792,122278154,122274038,122271434	122422569,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122351143,122347479,122341697,122336748,122334705,122334110,122333143,122328426,122328162,122319348,122316855,122309882,122288541,122279145,122278942,122278203,122274162,122273100	Gene ID= ENSG00000130779.19 TPM= 67.6 Transcript Type= protein_coding
chr12	122271434	122364017	122271434	122364017	-	ENST00000545889.5@CLIP1	ENST00000545889.5	protein_coding	122363983,122360959,122355115,122354453,122352726,122347375,122340981,122334648,122334027,122332987,122328261,122327947,122319232,122316749,122309762,122288489,122279028,122278792,122278154,122274038,122271434	122364017,122361181,122355312,122354556,122352786,122347479,122341697,122334705,122334110,122333143,122328426,122328162,122319348,122316855,122309882,122288541,122279145,122278942,122278203,122274162,122273100	Gene ID= ENSG00000130779.19 TPM= 9.85 Transcript Type= protein_coding
chr12	122406077	122407771	122406077	122407771	+	transcript5382.chr12.nnic@NA	transcript5382.chr12.nnic	NA	122406077	122407771	Gene ID= novel_gene_chr12_5383 TPM= 5.79 Transcript Type= NA
chr12	122472899	122501073	122472899	122501073	-	ENST00000633063.1@ZCCHC8	ENST00000633063.1	protein_coding	122500640,122498827,122492715,122490462,122489386,122483460,122483279,122482635,122481945,122481522,122480190,122478206,122477841,122472899	122501073,122498867,122492789,122490567,122489463,122483563,122483344,122482695,122482087,122481664,122480311,122478292,122477958,122474275	Gene ID= ENSG00000033030.13 TPM= 19.31 Transcript Type= protein_coding
chr12	122472899	122501016	122472899	122501016	-	transcript5388.chr12.nnic@ZCCHC8	transcript5388.chr12.nnic	protein_coding	122500640,122498827,122492715,122490462,122489386,122482635,122481945,122481522,122480190,122478206,122477841,122472899	122501016,122498869,122492789,122490567,122489463,122482695,122482087,122481664,122480311,122478292,122477958,122474275	Gene ID= ENSG00000033030.13 TPM= 6.76 Transcript Type= NA
chr12	122504726	122526991	122504726	122526991	-	transcript5409.chr12.nic@RSRC2	transcript5409.chr12.nic	protein_coding	122526848,122522143,122521385,122518839,122517227,122515105,122511109,122508218,122506834,122504726	122526991,122522299,122521428,122519029,122517430,122515227,122511188,122508450,122506923,122505706	Gene ID= ENSG00000111011.17 TPM= 24.13 Transcript Type= NA
chr12	122503458	122526999	122503458	122526999	-	ENST00000331738.11@RSRC2	ENST00000331738.11	protein_coding	122526848,122522143,122521385,122518839,122517227,122515105,122511109,122508218,122506834,122503458	122526999,122522299,122521428,122519029,122517430,122515227,122511188,122508447,122506923,122505706	Gene ID= ENSG00000111011.17 TPM= 3.86 Transcript Type= protein_coding
chr12	122505059	122527000	122505059	122527000	-	ENST00000532695.5@RSRC2	ENST00000532695.5	protein_coding	122526848,122522143,122521385,122520504,122518839,122517227,122515105,122511109,122508218,122506834,122505059	122527000,122522299,122521428,122520581,122519029,122517430,122515227,122511188,122508450,122506923,122505706	Gene ID= ENSG00000111011.17 TPM= 11.58 Transcript Type= nonsense_mediated_decay
chr12	122505059	122526936	122505059	122526936	-	ENST00000433877.6@RSRC2	ENST00000433877.6	protein_coding	122526848,122522143,122521385,122520504,122518839,122517227,122515105,122511109,122508218,122506834,122505059	122526936,122522299,122521428,122520581,122519051,122517430,122515227,122511188,122508447,122506923,122505706	Gene ID= ENSG00000111011.17 TPM= 2.41 Transcript Type= nonsense_mediated_decay
chr12	122508250	122526949	122508250	122526949	-	ENST00000525335.6@RSRC2	ENST00000525335.6	protein_coding	122526848,122522143,122521385,122518839,122517227,122515105,122514712,122511109,122508250	122526949,122522329,122521428,122519029,122517430,122515227,122514728,122511188,122508447	Gene ID= ENSG00000111011.17 TPM= 10.62 Transcript Type= retained_intron
chr12	122511111	122526995	122511111	122526995	-	ENST00000527399.3@RSRC2	ENST00000527399.3	protein_coding	122526848,122522143,122521385,122520504,122518839,122517231,122515105,122511111	122526995,122522299,122521428,122520581,122519051,122517430,122515227,122511188	Gene ID= ENSG00000111011.17 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	122752802	122771061	122752802	122771061	+	transcript5441.chr12.nnic@DENR	transcript5441.chr12.nnic	protein_coding	122752802,122753693,122762187,122762845,122765304,122767488,122768782,122769034,122769314	122752950,122753807,122762206,122762929,122765387,122767604,122768921,122769293,122771061	Gene ID= ENSG00000139726.10 TPM= 3.54 Transcript Type= NA
chr12	122752774	122771064	122752774	122771064	+	ENST00000280557.10@DENR	ENST00000280557.10	protein_coding	122752774,122753693,122762187,122762845,122765304,122767488,122768782,122769034	122752950,122753807,122762206,122762929,122765387,122767604,122768921,122771064	Gene ID= ENSG00000139726.10 TPM= 54.7 Transcript Type= protein_coding
chr12	122835426	122862960	122835426	122862960	+	ENST00000253083.8@HIP1R	ENST00000253083.8	protein_coding	122835426,122848031,122848466,122848796,122849875,122850835,122851236,122854043,122854905,122855053,122855265,122855551,122855831,122855980,122856256,122856432,122856625,122857021,122858102,122858349,122858838,122859061,122859426,122859772,122860047,122860148,122860423,122860679,122860916,122861131,122861308,122861706	122835643,122848094,122848608,122848852,122849955,122850911,122851297,122854183,122854962,122855128,122855405,122855612,122855903,122856163,122856344,122856548,122856726,122857215,122858249,122858435,122858945,122859197,122859536,122859830,122860077,122860210,122860523,122860784,122861039,122861192,122861514,122862960	Gene ID= ENSG00000130787.13 TPM= 8.69 Transcript Type= protein_coding
chr12	122865328	122896444	122865328	122896444	-	ENST00000267202.6@VPS37B	ENST00000267202.6	protein_coding	122895952,122870890,122868480,122865328	122896444,122871061,122868562,122867607	Gene ID= ENSG00000139722.6 TPM= 22.2 Transcript Type= protein_coding
chr12	122928992	122966496	122928992	122966496	-	ENST00000280560.12@ABCB9	ENST00000280560.12	protein_coding	122966287,122959635,122950451,122949788,122948624,122946025,122944391,122940807,122940111,122935272,122932192,122928992	122966496,122960322,122950565,122949918,122948829,122946222,122944519,122940995,122940284,122935431,122932328,122930171	Gene ID= ENSG00000150967.17 TPM= 1.93 Transcript Type= protein_coding
chr12	122975214	122980042	122975214	122980042	+	transcript5467.chr12.nic@OGFOD2	transcript5467.chr12.nic	protein_coding	122975214,122975811,122976654,122976871,122978360,122978753,122979083	122975383,122975867,122976767,122976970,122978569,122979010,122980042	Gene ID= ENSG00000111325.16 TPM= 3.86 Transcript Type= NA
chr12	122975220	122980041	122975220	122980041	+	ENST00000228922.11@OGFOD2	ENST00000228922.11	protein_coding	122975220,122975811,122976654,122976871,122978442,122978753,122979083	122975383,122975867,122976767,122976970,122978569,122979010,122980041	Gene ID= ENSG00000111325.16 TPM= 10.62 Transcript Type= protein_coding
chr12	122980060	122982913	122980060	122982913	+	ENST00000543566.5@ARL6IP4	ENST00000543566.5	protein_coding	122980060,122981129,122981595,122981957,122982469,122982620	122980745,122981266,122981879,122982074,122982538,122982913	Gene ID= ENSG00000182196.13 TPM= 32.77 Transcript Type= protein_coding
chr12	122980060	122982909	122980060	122982909	+	ENST00000315580.9@ARL6IP4	ENST00000315580.9	protein_coding	122980060,122981129,122981571,122981957,122982469,122982620	122980745,122981299,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 16.05 Transcript Type= protein_coding
chr12	122980189	122982909	122980189	122982909	+	ENST00000453766.6@ARL6IP4	ENST00000453766.6	protein_coding	122980189,122981129,122981595,122981957,122982469,122982620	122980745,122981299,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 17.02 Transcript Type= protein_coding
chr12	122980495	122982909	122980495	122982909	+	ENST00000454885.6@ARL6IP4	ENST00000454885.6	protein_coding	122980495,122981129,122981571,122981957,122982469,122982620	122980887,122981266,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 3.02 Transcript Type= protein_coding
chr12	122980721	122982873	122980721	122982873	+	ENST00000536502.5@ARL6IP4	ENST00000536502.5	protein_coding	122980721,122981595,122981957,122982469,122982620	122981266,122981879,122982074,122982538,122982873	Gene ID= ENSG00000182196.13 TPM= 1.93 Transcript Type= retained_intron
chr12	123000304	123151107	123000304	123151107	-	transcript5462.chr12.nnic@PITPNM2	transcript5462.chr12.nnic	protein_coding	123150717,123110385,123034513,123013828,123012613,123009850,123005240,123004394,123001054,123000778,123000304	123151107,123110488,123034685,123014042,123012734,123010077,123005548,123004489,123001158,123000848,123000478	Gene ID= ENSG00000090975.12 TPM= 3.38 Transcript Type= NA
chr12	123000304	123151005	123000304	123151005	-	transcript5463.chr12.nnic@PITPNM2	transcript5463.chr12.nnic	protein_coding	123150753,123110385,123034513,123013828,123012613,123009850,123005240,123004394,123001054,123000778,123000304	123151005,123110488,123034685,123014042,123012734,123010077,123005548,123004489,123001158,123000848,123000478	Gene ID= ENSG00000090975.12 TPM= 2.41 Transcript Type= NA
chr12	123232916	123257959	123232916	123257959	+	ENST00000253233.5@C12orf65	ENST00000253233.5	protein_coding	123232916,123253647,123256813	123233531,123253956,123257959	Gene ID= ENSG00000130921.7 TPM= 17.86 Transcript Type= protein_coding
chr12	123233481	123257959	123233481	123257959	+	ENST00000366329.6@C12orf65	ENST00000366329.6	protein_coding	123233481,123253647,123256813	123233924,123253956,123257959	Gene ID= ENSG00000130921.7 TPM= 2.41 Transcript Type= protein_coding
chr12	123260981	123272140	123260981	123272140	-	ENST00000261692.6@CDK2AP1	ENST00000261692.6	protein_coding	123271564,123267185,123265196,123260981	123272140,123267282,123265322,123261803	Gene ID= ENSG00000111328.6 TPM= 256.77 Transcript Type= protein_coding
chr12	123320833	123364858	123320833	123364858	-	transcript5526.chr12.nnic@SBNO1	transcript5526.chr12.nnic	protein_coding	123364701,123361609,123350310,123348029,123345258,123340988,123336395,123334053,123331242,123330419,123328734,123327892,123327707,123327426,123326152,123325502,123323680,123321535,123320833	123364858,123361727,123350441,123348133,123345567,123341088,123336491,123334213,123331375,123330509,123328895,123328027,123327812,123327579,123326334,123325599,123323831,123321732,123320866	Gene ID= ENSG00000139697.13 TPM= 9.17 Transcript Type= NA
chr12	123383773	123409358	123383773	123409358	+	ENST00000402868.7@KMT5A	ENST00000402868.7	protein_coding	123383773,123389433,123390630,123395047,123396345,123403573,123404884,123407493	123384208,123389554,123390786,123395266,123396432,123403632,123405074,123409358	Gene ID= ENSG00000183955.12 TPM= 5.47 Transcript Type= protein_coding
chr12	123388883	123409358	123388883	123409358	+	transcript5534.chr12.nnic@KMT5A	transcript5534.chr12.nnic	protein_coding	123388883,123389433,123390630,123395047,123396345,123403573,123404884,123407493	123389182,123389554,123390786,123395266,123396432,123403632,123405074,123409358	Gene ID= ENSG00000183955.12 TPM= 13.68 Transcript Type= NA
chr12	123388923	123409358	123388923	123409358	+	transcript5538.chr12.nic@KMT5A	transcript5538.chr12.nic	protein_coding	123388923,123390630,123395047,123396345,123403573,123404884,123407493	123389182,123390786,123395266,123396432,123403632,123405074,123409358	Gene ID= ENSG00000183955.12 TPM= 10.38 Transcript Type= NA
chr12	123388943	123409358	123388943	123409358	+	transcript5540.chr12.nic@KMT5A	transcript5540.chr12.nic	protein_coding	123388943,123390630,123395047,123396345,123403573,123404884,123407493	123389554,123390786,123395266,123396432,123403632,123405074,123409358	Gene ID= ENSG00000183955.12 TPM= 6.44 Transcript Type= NA
chr12	123415389	123436769	123415389	123436769	-	transcript5546.chr12.nnic@RILPL2	transcript5546.chr12.nnic	protein_coding	123436082,123423044,123415389	123436769,123423157,123415921	Gene ID= ENSG00000150977.10 TPM= 3.86 Transcript Type= NA
chr12	123458116	123466387	123458116	123466387	+	transcript5578.chr12.nnic@SNRNP35	transcript5578.chr12.nnic	protein_coding	123458116,123458964,123459540,123465538	123458216,123459399,123459900,123466387	Gene ID= ENSG00000184209.14 TPM= 4.34 Transcript Type= NA
chr12	123458107	123467667	123458107	123467667	+	transcript5583.chr12.nnic@SNRNP35	transcript5583.chr12.nnic	protein_coding	123458107,123465538,123467487	123458216,123466273,123467667	Gene ID= ENSG00000184209.14 TPM= 1.93 Transcript Type= NA
chr12	123458116	123466390	123458116	123466390	+	transcript5584.chr12.nnic@SNRNP35	transcript5584.chr12.nnic	protein_coding	123458116,123458964,123465538	123458216,123459206,123466390	Gene ID= ENSG00000184209.14 TPM= 5.31 Transcript Type= NA
chr12	123457641	123466936	123457641	123466936	+	ENST00000526639.2@SNRNP35	ENST00000526639.2	protein_coding	123457641,123465538	123458216,123466936	Gene ID= ENSG00000184209.14 TPM= 49.23 Transcript Type= protein_coding
chr12	123472203	123534123	123472203	123534123	-	transcript5550.chr12.nnic@RILPL1	transcript5550.chr12.nnic	protein_coding	123533174,123523495,123499418,123498544,123485633,123484180,123475663,123475364,123472203	123534123,123523645,123499536,123498765,123485805,123484272,123475750,123475387,123472682	Gene ID= ENSG00000188026.12 TPM= 12.87 Transcript Type= NA
chr12	123471812	123533893	123471812	123533893	-	transcript5558.chr12.nnic@RILPL1	transcript5558.chr12.nnic	protein_coding	123533174,123523495,123499418,123498544,123485633,123484180,123475364,123471812	123533893,123523645,123499536,123498765,123485805,123484272,123475387,123472682	Gene ID= ENSG00000188026.12 TPM= 14 Transcript Type= NA
chr12	123470054	123533718	123470054	123533718	-	ENST00000376874.8@RILPL1	ENST00000376874.8	protein_coding	123533174,123523495,123499418,123498544,123485633,123484180,123470054	123533718,123523645,123499536,123498765,123485805,123484272,123472682	Gene ID= ENSG00000188026.12 TPM= 1.93 Transcript Type= protein_coding
chr12	123471816	123533718	123471816	123533718	-	ENST00000636882.1@RILPL1	ENST00000636882.1	protein_coding	123533174,123523495,123499418,123498544,123485633,123484180,123475663,123471816	123533718,123523645,123499536,123498765,123485805,123484272,123475750,123472682	Gene ID= ENSG00000188026.12 TPM= 11.34 Transcript Type= protein_coding
chr12	123531053	123532776	123531053	123532776	-	transcript5599.chr12.nnic@NA	transcript5599.chr12.nnic	NA	123531053	123532776	Gene ID= novel_gene_chr12_5600 TPM= 1.93 Transcript Type= NA
chr12	123584515	123598139	123584515	123598139	+	transcript5604.chr12.nic@TMED2	transcript5604.chr12.nic	protein_coding	123584515,123586747,123587611,123590342,123596605	123584816,123586939,123587631,123590449,123598139	Gene ID= ENSG00000086598.10 TPM= 266.43 Transcript Type= NA
chr12	123584534	123585305	123584534	123585305	+	transcript5608.chr12.nnic@NA	transcript5608.chr12.nnic	NA	123584534	123585305	Gene ID= novel_gene_chr12_5609 TPM= 1.93 Transcript Type= NA
chr12	123602075	123619698	123602075	123619698	+	transcript5613.chr12.nic@DDX55	transcript5613.chr12.nic	protein_coding	123602075,123605931,123606073,123607432,123607600,123608680,123609939,123613170,123615185,123616511,123617758,123618669,123619432	123602256,123605981,123606159,123607523,123607662,123608829,123610128,123613252,123615316,123616603,123617872,123618837,123619698	Gene ID= ENSG00000111364.15 TPM= 5.79 Transcript Type= NA
chr12	123603394	123606925	123603394	123606925	-	transcript5615.chr12.nnic@NA	transcript5615.chr12.nnic	NA	123603394	123606925	Gene ID= novel_gene_chr12_5616 TPM= 3.86 Transcript Type= NA
chr12	123621028	123633710	123621028	123633710	-	transcript5617.chr12.nnic@EIF2B1	transcript5617.chr12.nnic	protein_coding	123633545,123632345,123630397,123630169,123627044,123626425,123624787,123622636,123621708,123621028	123633710,123632446,123630533,123630285,123627156,123626493,123624862,123622761,123621920,123621422	Gene ID= ENSG00000111361.12 TPM= 5.79 Transcript Type= NA
chr12	123620406	123633766	123620406	123633766	-	ENST00000424014.6@EIF2B1	ENST00000424014.6	protein_coding	123633545,123632345,123630397,123630169,123627044,123626425,123624787,123622636,123620406	123633766,123632446,123630533,123630285,123627156,123626493,123624862,123622761,123621920	Gene ID= ENSG00000111361.12 TPM= 98.46 Transcript Type= protein_coding
chr12	123633829	123662606	123633829	123662606	+	ENST00000543341.6@GTF2H3	ENST00000543341.6	protein_coding	123633829,123639264,123645455,123647963,123650994,123652532,123652707,123654924,123655771,123659516,123659795,123660046,123660166	123633872,123639343,123645561,123648126,123651056,123652561,123652735,123654998,123655824,123659584,123659930,123660082,123662606	Gene ID= ENSG00000111358.13 TPM= 2.9 Transcript Type= protein_coding
chr12	123712318	123761755	123712318	123761755	+	ENST00000330342.7@ATP6V0A2	ENST00000330342.7	protein_coding	123712318,123718623,123722351,123724654,123726197,123727783,123733926,123735531,123737059,123743785,123744201,123744597,123744882,123747607,123748575,123751110,123752283,123754420,123756815,123757927	123712682,123718701,123722448,123724791,123726285,123727909,123734008,123735624,123737271,123743935,123744337,123744784,123744972,123747725,123748785,123751229,123752402,123754537,123756986,123761755	Gene ID= ENSG00000185344.13 TPM= 5.79 Transcript Type= protein_coding
chr12	123936417	123972730	123936417	123972730	-	transcript5641.chr12.nnic@CCDC92	transcript5641.chr12.nnic	protein_coding	123972529,123944669,123944272,123943347,123942744,123936417	123972730,123944740,123944364,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 3.86 Transcript Type= NA
chr12	123936417	123972751	123936417	123972751	-	transcript5642.chr12.nic@CCDC92	transcript5642.chr12.nic	protein_coding	123972529,123956284,123944272,123943347,123942744,123936417	123972751,123956444,123944364,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 1.93 Transcript Type= NA
chr12	123936417	123973005	123936417	123973005	-	transcript5644.chr12.nnic@CCDC92	transcript5644.chr12.nnic	protein_coding	123972529,123944272,123943347,123942744,123936417	123973005,123944354,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 13.51 Transcript Type= NA
chr12	123935622	123972824	123935622	123972824	-	ENST00000238156.7@CCDC92	ENST00000238156.7	protein_coding	123972529,123944272,123943347,123942744,123935622	123972824,123944364,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 8.69 Transcript Type= protein_coding
chr12	123936436	123972734	123936436	123972734	-	ENST00000545891.5@CCDC92	ENST00000545891.5	protein_coding	123972529,123943347,123942744,123936436	123972734,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 3.86 Transcript Type= protein_coding
chr12	124402484	124567626	124402484	124567626	-	transcript5652.chr12.nic@NCOR2	transcript5652.chr12.nic	protein_coding	124567308,124535565,124495147,124486441,124483596,124472952,124466173,124457106,124449815,124437930,124430615,124429613,124426622,124422501,124419957,124402484	124567626,124535611,124495368,124486568,124483773,124473131,124466286,124457162,124449867,124437996,124430787,124429706,124426800,124422555,124420055,124402561	Gene ID= ENSG00000196498.13 TPM= 9.65 Transcript Type= NA
chr12	124777633	124863847	124777633	124863847	-	ENST00000261693.10@SCARB1	ENST00000261693.10	protein_coding	124863595,124817550,124814973,124814202,124811870,124810174,124807761,124800124,124795195,124787406,124786357,124782683,124777633	124863847,124817707,124815114,124814405,124811965,124810289,124807927,124800242,124795268,124787457,124786503,124782811,124778586	Gene ID= ENSG00000073060.15 TPM= 4.83 Transcript Type= protein_coding
chr12	124906607	124907279	124906607	124907279	+	transcript5839.chr12.nnic@NA	transcript5839.chr12.nnic	NA	124906607	124907279	Gene ID= novel_gene_chr12_5840 TPM= 1.93 Transcript Type= NA
chr12	124911646	124914650	124911646	124914650	-	transcript5802.chr12.nnic@UBC	transcript5802.chr12.nnic	protein_coding	124914587,124911646	124914650,124911954	Gene ID= ENSG00000150991.14 TPM= 196.44 Transcript Type= NA
chr12	124911646	124914655	124911646	124914655	-	transcript5810.chr12.nnic@UBC	transcript5810.chr12.nnic	protein_coding	124914587,124911646	124914655,124912866	Gene ID= ENSG00000150991.14 TPM= 216.77 Transcript Type= NA
chr12	124911648	124915147	124911648	124915147	-	ENST00000339647.5@UBC	ENST00000339647.5	protein_coding	124914587,124911648	124915147,124913774	Gene ID= ENSG00000150991.14 TPM= 20651.19 Transcript Type= protein_coding
chr12	124911604	124915348	124911604	124915348	-	ENST00000536769.1@UBC	ENST00000536769.1	protein_coding	124911604	124915348	Gene ID= ENSG00000150991.14 TPM= 27.03 Transcript Type= protein_coding
chr12	124946826	124989122	124946826	124989122	-	ENST00000539298.1@DHX37	ENST00000539298.1	protein_coding	124988917,124986096,124982511,124980490,124977342,124975419,124972503,124971302,124968867,124968534,124967123,124966793,124965668,124964930,124964394,124960312,124957029,124956691,124954087,124953880,124952398,124950690,124950413,124950149,124949986,124948084,124946826	124989122,124986265,124982623,124980838,124977490,124975511,124972599,124971415,124968968,124968648,124967218,124966878,124965812,124965006,124964626,124960423,124957135,124956879,124954211,124953996,124952570,124950804,124950550,124950243,124950059,124948181,124947887	Gene ID= ENSG00000150990.7 TPM= 46.33 Transcript Type= retained_intron
chr12	125065379	125143320	125065379	125143320	+	ENST00000316519.10@AACS	ENST00000316519.10	protein_coding	125065379,125073876,125076491,125086330,125091426,125102679,125103000,125107121,125114477,125118641,125124705,125124902,125128161,125129335,125134003,125134794,125136662,125142092	125065717,125073979,125076611,125086443,125091523,125102793,125103081,125107268,125114557,125118765,125124769,125125024,125128274,125129460,125134072,125134852,125136864,125143320	Gene ID= ENSG00000081760.16 TPM= 11.58 Transcript Type= protein_coding
chr12	128793191	128823983	128793191	128823983	-	ENST00000266771.9@SLC15A4	ENST00000266771.9	protein_coding	128823398,128814775,128809943,128809396,128808788,128800854,128799259,128793191	128823983,128815070,128810111,128809473,128808956,128801009,128799417,128794356	Gene ID= ENSG00000139370.11 TPM= 208.51 Transcript Type= protein_coding
chr12	130789600	130839266	130789600	130839266	-	ENST00000261653.10@STX2	ENST00000261653.10	protein_coding	130839070,130827193,130821689,130812957,130808631,130806982,130801415,130801153,130798525,130789600	130839266,130827267,130821788,130813031,130808704,130807090,130801488,130801290,130798635,130791977	Gene ID= ENSG00000111450.13 TPM= 4.83 Transcript Type= protein_coding
chr12	130871879	130877678	130871879	130877678	+	ENST00000543796.5@RAN	ENST00000543796.5	protein_coding	130871879,130872584,130872836,130873003,130874546,130875612,130875882	130872126,130872629,130872920,130873128,130874733,130875782,130877678	Gene ID= ENSG00000132341.11 TPM= 473.49 Transcript Type= protein_coding
chr12	130872037	130877676	130872037	130877676	+	ENST00000448750.7@RAN	ENST00000448750.7	protein_coding	130872037,130872836,130873003,130874546,130875612,130875882	130872126,130872920,130873128,130874733,130875782,130877676	Gene ID= ENSG00000132341.11 TPM= 27.51 Transcript Type= protein_coding
chr12	130955125	130955717	130955125	130955717	-	transcript5901.chr12.nnic@NA	transcript5901.chr12.nnic	NA	130955125	130955717	Gene ID= novel_gene_chr12_5902 TPM= 2.9 Transcript Type= NA
chr12	131002499	131141460	131002499	131141460	+	ENST00000376682.8@ADGRD1	ENST00000376682.8	protein_coding	131002499,131003185,131004186,131005972,131014199,131076801,131084540,131104831,131105754,131108724,131118385,131120847,131131725,131136037,131136973,131138137,131139168	131002837,131003302,131004296,131006047,131014340,131076874,131084663,131104934,131105865,131108877,131118451,131120913,131131816,131136163,131137014,131138229,131141460	Gene ID= ENSG00000111452.12 TPM= 15.44 Transcript Type= processed_transcript
chr12	131712433	131799737	131712433	131799737	+	transcript5904.chr12.nic@SFSWAP	transcript5904.chr12.nic	protein_coding	131712433,131714822,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131764456,131766118,131778065,131786463,131797178,131799037,131799423	131714193,131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131764686,131766308,131778330,131786588,131797360,131799109,131799737	Gene ID= ENSG00000061936.9 TPM= 4.83 Transcript Type= NA
chr12	131711079	131778181	131711079	131778181	+	transcript5905.chr12.nic@SFSWAP	transcript5905.chr12.nic	protein_coding	131711079,131714071,131714822,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131764456,131766118,131778065	131711447,131714193,131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131764686,131766308,131778181	Gene ID= ENSG00000061936.9 TPM= 10.14 Transcript Type= NA
chr12	131711079	131778181	131711079	131778181	+	transcript5906.chr12.nic@SFSWAP	transcript5906.chr12.nic	protein_coding	131711079,131714071,131714822,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131764456,131766118,131778065	131711447,131714240,131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131764686,131766308,131778181	Gene ID= ENSG00000061936.9 TPM= 16.89 Transcript Type= NA
chr12	131711089	131799737	131711089	131799737	+	ENST00000261674.8@SFSWAP	ENST00000261674.8	protein_coding	131711089,131714071,131714822,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131764456,131766118,131778065,131786463,131797178,131799037,131799423	131711447,131714240,131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131764686,131766308,131778330,131786588,131797360,131799109,131799737	Gene ID= ENSG00000061936.9 TPM= 14.48 Transcript Type= protein_coding
chr12	131753123	131778195	131753123	131778195	+	ENST00000537164.1@SFSWAP	ENST00000537164.1	protein_coding	131753123,131754368,131755386,131756473,131766118,131778065	131753363,131754499,131755479,131756644,131766308,131778195	Gene ID= ENSG00000061936.9 TPM= 4.83 Transcript Type= protein_coding
chr12	131711080	131712843	131711080	131712843	+	transcript5912.chr12.nnic@NA	transcript5912.chr12.nnic	NA	131711080	131712843	Gene ID= novel_gene_chr12_5913 TPM= 4.83 Transcript Type= NA
chr12	131828393	131851771	131828393	131851771	+	ENST00000360564.5@MMP17	ENST00000360564.5	protein_coding	131828393,131838195,131838612,131840573,131841624,131843997,131845118,131845297,131849802,131850925	131828653,131838327,131838741,131840856,131841800,131844081,131845200,131845449,131850059,131851771	Gene ID= ENSG00000198598.6 TPM= 2.9 Transcript Type= protein_coding
chr12	131894651	131923167	131894651	131923167	+	ENST00000321867.5@ULK1	ENST00000321867.5	protein_coding	131894651,131895601,131895783,131906892,131907495,131908644,131908898,131909136,131909775,131909919,131910254,131910712,131911942,131913198,131913747,131914352,131915083,131915335,131915891,131916398,131916953,131917411,131918497,131919212,131919472,131919979,131921100,131921306	131895112,131895693,131895824,131906924,131907531,131908817,131908971,131909237,131909833,131910001,131910304,131910800,131912089,131913258,131913836,131914477,131915231,131915421,131916159,131916591,131917062,131917554,131918681,131919384,131919590,131920136,131921235,131923167	Gene ID= ENSG00000177169.9 TPM= 194.03 Transcript Type= protein_coding
chr12	131929200	131943859	131929200	131943859	+	ENST00000443358.6@PUS1	ENST00000443358.6	protein_coding	131929200,131929907,131932175,131939173,131941292,131943539	131929380,131930135,131932312,131939275,131941983,131943859	Gene ID= ENSG00000177192.13 TPM= 12.55 Transcript Type= protein_coding
chr12	131929223	131945896	131929223	131945896	+	ENST00000376649.7@PUS1	ENST00000376649.7	protein_coding	131929223,131929907,131932175,131939173,131941292,131943539	131929796,131930135,131932312,131939275,131941983,131945896	Gene ID= ENSG00000177192.13 TPM= 12.55 Transcript Type= protein_coding
chr12	131929252	131934921	131929252	131934921	+	transcript5931.chr12.nnic@PUS1	transcript5931.chr12.nnic	protein_coding	131929252,131929907,131932175,131932722,131934644	131929796,131930135,131932312,131932833,131934921	Gene ID= ENSG00000177192.13 TPM= 2.9 Transcript Type= NA
chr12	132144422	132152473	132144422	132152473	+	transcript5955.chr12.nnic@NOC4L	transcript5955.chr12.nnic	protein_coding	132144422,132144854,132145559,132147281,132147633,132147880,132148072,132148784,132150981,132151258,132151484,132151738,132152084,132152282	132144605,132144974,132145665,132147388,132147782,132147979,132148106,132148895,132151041,132151368,132151644,132151820,132152197,132152473	Gene ID= ENSG00000184967.6 TPM= 9.65 Transcript Type= NA
chr12	132144457	132152473	132144457	132152473	+	transcript5961.chr12.nnic@NOC4L	transcript5961.chr12.nnic	protein_coding	132144457,132151258,132151484,132151738,132152084,132152282	132144605,132151368,132151644,132151820,132152197,132152473	Gene ID= ENSG00000184967.6 TPM= 2.9 Transcript Type= NA
chr12	132144448	132152441	132144448	132152441	+	ENST00000330579.5@NOC4L	ENST00000330579.5	protein_coding	132144448,132144854,132145559,132147281,132147633,132147880,132148072,132148609,132148784,132150981,132151258,132151484,132151738,132152084,132152282	132144605,132144974,132145665,132147388,132147782,132147979,132148106,132148659,132148895,132151041,132151368,132151644,132151820,132152197,132152441	Gene ID= ENSG00000184967.6 TPM= 66.61 Transcript Type= protein_coding
chr12	132490156	132511952	132490156	132511952	+	transcript5970.chr12.nnic@FBRSL1	transcript5970.chr12.nnic	protein_coding	132490156,132490771,132508153,132509166	132490718,132490861,132508350,132511952	Gene ID= ENSG00000112787.12 TPM= 20.75 Transcript Type= NA
chr12	132490057	132511952	132490057	132511952	+	transcript5972.chr12.nic@FBRSL1	transcript5972.chr12.nic	protein_coding	132490057,132508153,132509166	132490861,132508350,132511952	Gene ID= ENSG00000112787.12 TPM= 27.51 Transcript Type= NA
chr12	132548698	132554491	132548698	132554491	+	transcript5973.chr12.nnic@NA	transcript5973.chr12.nnic	NA	132548698	132554491	Gene ID= novel_gene_chr12_5974 TPM= 3.86 Transcript Type= NA
chr12	132687655	132702106	132687655	132702106	+	transcript5981.chr12.nnic@PXMP2	transcript5981.chr12.nnic	protein_coding	132687655,132690263,132695884,132701250,132701494	132687792,132690376,132696046,132701369,132702106	Gene ID= ENSG00000176894.9 TPM= 1.93 Transcript Type= NA
chr12	132687644	132702113	132687644	132702113	+	transcript5983.chr12.nic@PXMP2	transcript5983.chr12.nic	protein_coding	132687644,132690263,132695884,132701250	132687792,132690376,132696046,132702113	Gene ID= ENSG00000176894.9 TPM= 3.86 Transcript Type= NA
chr12	132687635	132704991	132687635	132704991	+	transcript5984.chr12.nic@PXMP2	transcript5984.chr12.nic	protein_coding	132687635,132690263,132701250,132704619	132687792,132690376,132701369,132704991	Gene ID= ENSG00000176894.9 TPM= 1.93 Transcript Type= NA
chr12	132687606	132704991	132687606	132704991	+	ENST00000317479.7@PXMP2	ENST00000317479.7	protein_coding	132687606,132690263,132695884,132701250,132704619	132687792,132690376,132696046,132701369,132704991	Gene ID= ENSG00000176894.9 TPM= 55.99 Transcript Type= protein_coding
chr12	132709659	132710571	132709659	132710571	-	transcript5989.chr12.nnic@NA	transcript5989.chr12.nnic	NA	132709659	132710571	Gene ID= novel_gene_chr12_5990 TPM= 1.93 Transcript Type= NA
chr12	132710833	132722734	132710833	132722734	+	transcript5991.chr12.nnic@PGAM5	transcript5991.chr12.nnic	protein_coding	132710833,132714858,132717439,132717710,132717987,132720678,132721852	132711067,132715036,132717564,132717798,132718120,132721278,132722734	Gene ID= ENSG00000247077.6 TPM= 7.72 Transcript Type= NA
chr12	132710645	132722734	132710645	132722734	+	transcript5994.chr12.nnic@PGAM5	transcript5994.chr12.nnic	protein_coding	132710645,132714858,132717439,132717710,132717987,132720678,132721888	132711067,132715036,132717564,132717798,132718120,132721313,132722734	Gene ID= ENSG00000247077.6 TPM= 6.76 Transcript Type= NA
chr12	132710842	132722730	132710842	132722730	+	transcript5996.chr12.nnic@PGAM5	transcript5996.chr12.nnic	protein_coding	132710842,132714858,132717439,132717710,132717987,132720678,132721854	132711067,132715036,132717564,132717798,132718120,132721331,132722730	Gene ID= ENSG00000247077.6 TPM= 4.83 Transcript Type= NA
chr12	132710835	132722734	132710835	132722734	+	transcript6000.chr12.nnic@PGAM5	transcript6000.chr12.nnic	protein_coding	132710835,132714858,132717439,132717710,132717987,132720678,132721719	132711067,132715036,132717564,132717798,132718120,132721453,132722734	Gene ID= ENSG00000247077.6 TPM= 2.9 Transcript Type= NA
chr12	132710819	132722734	132710819	132722734	+	ENST00000498926.6@PGAM5	ENST00000498926.6	protein_coding	132710819,132714858,132717439,132717710,132717987,132720678	132711067,132715036,132717564,132717798,132718120,132722734	Gene ID= ENSG00000247077.6 TPM= 16.41 Transcript Type= protein_coding
chr12	132710819	132719166	132710819	132719166	+	ENST00000317555.6@PGAM5	ENST00000317555.6	protein_coding	132710819,132714858,132717439,132717710,132717987,132718762	132711067,132715036,132717564,132717798,132718120,132719166	Gene ID= ENSG00000247077.6 TPM= 3.86 Transcript Type= protein_coding
chr12	132725503	132761888	132725503	132761888	-	ENST00000357997.9@ANKLE2	ENST00000357997.9	protein_coding	132761618,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132725503	132761888,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734575,132730270,132728163,132727443	Gene ID= ENSG00000176915.14 TPM= 10.62 Transcript Type= protein_coding
chr12	132727133	132761862	132727133	132761862	-	transcript6013.chr12.nic@ANKLE2	transcript6013.chr12.nic	protein_coding	132761618,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132728032,132727133	132761862,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734575,132728163,132727443	Gene ID= ENSG00000176915.14 TPM= 7.72 Transcript Type= NA
chr12	132754285	132761862	132754285	132761862	-	transcript6018.chr12.nic@ANKLE2	transcript6018.chr12.nic	protein_coding	132761618,132754285	132761862,132755133	Gene ID= ENSG00000176915.14 TPM= 3.86 Transcript Type= NA
chr12	132769537	132772565	132769537	132772565	-	transcript6022.chr12.nnic@GOLGA3	transcript6022.chr12.nnic	protein_coding	132771452,132769537	132772565,132770524	Gene ID= ENSG00000090615.14 TPM= 21.24 Transcript Type= NA
chr12	132840352	132887618	132840352	132887618	-	transcript6024.chr12.nnic@CHFR	transcript6024.chr12.nnic	protein_coding	132887547,132887196,132877555,132872285,132870724,132869619,132862333,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840352	132887618,132887340,132877654,132872394,132870783,132869798,132862425,132861634,132859227,132857559,132856630,132853573,132851734,132848724,132848155,132847130,132844134,132843083,132841596	Gene ID= ENSG00000072609.17 TPM= 4.83 Transcript Type= NA
chr12	132840352	132887623	132840352	132887623	-	ENST00000450056.6@CHFR	ENST00000450056.6	protein_coding	132887547,132887196,132877555,132872285,132870724,132869619,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840352	132887623,132887340,132877654,132872394,132870783,132869798,132861634,132859227,132857559,132856630,132853573,132851737,132848724,132848155,132847130,132844134,132843083,132841596	Gene ID= ENSG00000072609.17 TPM= 10.62 Transcript Type= protein_coding
chr12	132942120	132956318	132942120	132956318	-	transcript6038.chr12.nnic@ZNF605	transcript6038.chr12.nnic	protein_coding	132956243,132948148,132945621,132942120	132956318,132948270,132945797,132943022	Gene ID= ENSG00000196458.10 TPM= 1.93 Transcript Type= NA
chr12	133037390	133059606	133037390	133059606	+	ENST00000539354.5@ZNF84	ENST00000539354.5	protein_coding	133037390,133041278,133047955,133048753,133056954	133037545,133041482,133048081,133048848,133059606	Gene ID= ENSG00000198040.10 TPM= 8.69 Transcript Type= protein_coding
chr12	133080431	133107428	133080431	133107428	+	transcript6054.chr12.nnic@ZNF140	transcript6054.chr12.nnic	protein_coding	133080431,133081273,133083103,133083466,133105510	133080551,133081329,133083229,133083561,133107428	Gene ID= ENSG00000196387.9 TPM= 1.93 Transcript Type= NA
chr12	133079838	133107544	133079838	133107544	+	ENST00000355557.6@ZNF140	ENST00000355557.6	protein_coding	133079838,133081273,133083103,133083466,133105510	133081072,133081329,133083229,133083561,133107544	Gene ID= ENSG00000196387.9 TPM= 6.76 Transcript Type= protein_coding
chr12	133130627	133156968	133130627	133156968	+	ENST00000426665.6@ZNF10	ENST00000426665.6	protein_coding	133130627,133144434,133151028,133151809,133155503	133131014,133144525,133151154,133151904,133156968	Gene ID= ENSG00000256223.5 TPM= 1.93 Transcript Type= protein_coding
chr12	133181559	133205173	133181559	133205173	+	ENST00000541009.6@ZNF268	ENST00000541009.6	protein_coding	133181559,133181946,133187872,133191489,133191908,133193428,133202144	133181686,133182030,133188072,133191615,133192003,133193533,133205173	Gene ID= ENSG00000090612.20 TPM= 5.79 Transcript Type= protein_coding
chr13	19633659	19646841	19633659	19646841	+	transcript4.chr13.nic@MPHOSPH8	transcript4.chr13.nic	protein_coding	19633659,19642115,19646443	19633961,19642270,19646841	Gene ID= ENSG00000196199.13 TPM= 7.72 Transcript Type= NA
chr13	19702871	19783019	19702871	19783019	-	ENST00000619300.4@PSPC1	ENST00000619300.4	protein_coding	19782917,19782386,19772242,19759323,19751271,19741565,19730239,19709542,19705662,19702871	19783019,19782791,19772543,19759418,19751467,19741649,19730344,19709599,19705831,19703360	Gene ID= ENSG00000121390.18 TPM= 1.28 Transcript Type= protein_coding
chr13	19674756	19782917	19674756	19782917	-	ENST00000471658.5@PSPC1	ENST00000471658.5	protein_coding	19782386,19772242,19759323,19751271,19741565,19730239,19677724,19674756	19782917,19772543,19759418,19751467,19741649,19730344,19677823,19674984	Gene ID= ENSG00000121390.18 TPM= 6.11 Transcript Type= nonsense_mediated_decay
chr13	19675388	19782942	19675388	19782942	-	ENST00000492741.5@PSPC1	ENST00000492741.5	protein_coding	19782386,19772242,19759323,19751271,19741565,19730239,19677724,19675388	19782942,19772543,19759418,19751467,19741649,19730344,19677823,19675653	Gene ID= ENSG00000121390.18 TPM= 4.18 Transcript Type= nonsense_mediated_decay
chr13	19823482	19863552	19823482	19863552	-	transcript19.chr13.nic@ZMYM5	transcript19.chr13.nic	protein_coding	19863450,19862399,19851355,19838700,19837656,19835477,19823482	19863552,19862466,19852190,19838985,19837821,19835689,19825235	Gene ID= ENSG00000132950.18 TPM= 1.93 Transcript Type= NA
chr13	19823484	19863636	19823484	19863636	-	ENST00000337963.8@ZMYM5	ENST00000337963.8	protein_coding	19863450,19862399,19851689,19851355,19838700,19837656,19835477,19823484	19863636,19862466,19852190,19851448,19838985,19837821,19835689,19825235	Gene ID= ENSG00000132950.18 TPM= 7.72 Transcript Type= protein_coding
chr13	19863858	19865048	19863858	19865048	+	ENST00000620617.1@AL355001.2	ENST00000620617.1	lincRNA	19863858	19865048	Gene ID= ENSG00000275964.1 TPM= 3.86 Transcript Type= lincRNA
chr13	19958685	20086480	19958685	20086480	+	transcript30.chr13.nnic@ZMYM2	transcript30.chr13.nnic	protein_coding	19958685,19959958,19993063,19993826,20002850,20004276,20005074,20006374,20019547,20026612,20027203,20031319,20034254,20036737,20051433,20052277,20058575,20059447,20061053,20062846,20064451,20066851,20067239,20082016,20082781,20083656,20085822	19958841,19960026,19993564,19993919,20003135,20004398,20005239,20006586,20019618,20026762,20027318,20031435,20034404,20036909,20051598,20052311,20058704,20059562,20061224,20062971,20064545,20067019,20067390,20082130,20083032,20083776,20086480	Gene ID= ENSG00000121741.16 TPM= 1.93 Transcript Type= NA
chr13	19958685	20086480	19958685	20086480	+	transcript31.chr13.nic@ZMYM2	transcript31.chr13.nic	protein_coding	19958685,19959958,19993063,19993826,20002850,20005074,20006374,20019547,20026612,20027203,20031319,20034254,20036737,20051433,20052277,20058575,20059447,20061053,20062846,20064451,20066851,20067239,20082016,20082781,20083656,20085822	19958841,19960026,19993564,19993919,20003135,20005239,20006586,20019618,20026762,20027318,20031435,20034404,20036909,20051598,20052311,20058704,20059562,20061224,20062971,20064545,20067019,20067390,20082130,20083032,20083776,20086480	Gene ID= ENSG00000121741.16 TPM= 2.9 Transcript Type= NA
chr13	20403671	20525892	20403671	20525892	-	transcript35.chr13.nnic@CRYL1	transcript35.chr13.nnic	protein_coding	20525754,20512443,20489370,20432102,20413282,20404635,20403671	20525892,20512550,20489496,20432296,20413387,20404741,20404242	Gene ID= ENSG00000165475.13 TPM= 2.9 Transcript Type= NA
chr13	20430756	20525829	20430756	20525829	-	transcript37.chr13.nic@CRYL1	transcript37.chr13.nic	protein_coding	20525754,20512443,20489370,20439593,20430756	20525829,20512550,20489496,20439754,20432296	Gene ID= ENSG00000165475.13 TPM= 1.93 Transcript Type= NA
chr13	20403667	20525857	20403667	20525857	-	ENST00000298248.11@CRYL1	ENST00000298248.11	protein_coding	20525754,20512443,20489370,20439593,20432102,20413282,20404635,20403667	20525857,20512550,20489496,20439754,20432296,20413387,20404741,20404242	Gene ID= ENSG00000165475.13 TPM= 25.1 Transcript Type= protein_coding
chr13	20567151	20691362	20567151	20691362	+	transcript42.chr13.nic@IFT88	transcript42.chr13.nic	protein_coding	20567151,20567670,20574380,20582957,20589811,20590967,20591618,20592335,20596150,20597015,20598651,20599451,20601705,20605035,20615793,20625750,20631016,20638332,20641290,20643455,20644843,20653876,20656365,20663498,20670973,20690705,20691054	20567256,20567997,20574475,20583019,20589867,20591020,20591681,20592404,20596240,20597119,20598753,20599565,20601933,20605105,20615879,20625849,20631102,20638518,20641398,20643605,20644958,20653928,20656430,20663604,20671039,20690815,20691362	Gene ID= ENSG00000032742.17 TPM= 1.93 Transcript Type= NA
chr13	20567069	20691362	20567069	20691362	+	ENST00000351808.9@IFT88	ENST00000351808.9	protein_coding	20567069,20574380,20582957,20589811,20590967,20591618,20592335,20596150,20597015,20598651,20599451,20601705,20605035,20615793,20625750,20631016,20638332,20641290,20643455,20644843,20653876,20656365,20663498,20670973,20690705,20691054	20567256,20574475,20583019,20589867,20591020,20591681,20592404,20596240,20597119,20598753,20599565,20601933,20605105,20615879,20625849,20631102,20638518,20641398,20643605,20644958,20653928,20656430,20663604,20671039,20690815,20691362	Gene ID= ENSG00000032742.17 TPM= 7.72 Transcript Type= protein_coding
chr13	20703713	20723098	20703713	20723098	+	transcript58.chr13.nic@IL17D	transcript58.chr13.nic	protein_coding	20703713,20721636	20704291,20723098	Gene ID= ENSG00000172458.4 TPM= 3.86 Transcript Type= NA
chr13	20702128	20704320	20702128	20704320	-	transcript59.chr13.nnic@NA	transcript59.chr13.nnic	NA	20702128	20704320	Gene ID= novel_gene_chr13_60 TPM= 33.79 Transcript Type= NA
chr13	20728731	20773949	20728731	20773949	-	ENST00000382758.5@EEF1AKMT1	ENST00000382758.5	protein_coding	20773921,20757455,20737723,20731841,20728731	20773949,20757617,20737805,20732121,20729216	Gene ID= ENSG00000150456.10 TPM= 1.93 Transcript Type= protein_coding
chr13	20850889	20853350	20850889	20853350	+	transcript64.chr13.nnic@NA	transcript64.chr13.nnic	NA	20850889	20853350	Gene ID= novel_gene_chr13_65 TPM= 1.93 Transcript Type= NA
chr13	20973032	21061547	20973032	21061547	-	ENST00000382592.4@LATS2	ENST00000382592.4	protein_coding	21061346,21045685,20991272,20987881,20983224,20981466,20979691,20973032	21061547,21046230,20991404,20989304,20983806,20981648,20979797,20975364	Gene ID= ENSG00000150457.8 TPM= 15.44 Transcript Type= protein_coding
chr13	21060503	21062936	21060503	21062936	+	transcript68.chr13.nnic@NA	transcript68.chr13.nnic	NA	21060503	21062936	Gene ID= novel_gene_chr13_69 TPM= 1.93 Transcript Type= NA
chr13	21176652	21177356	21176652	21177356	+	transcript81.chr13.nnic@MRPL57	transcript81.chr13.nnic	protein_coding	21176652,21176862	21176717,21177356	Gene ID= ENSG00000173141.4 TPM= 13.51 Transcript Type= NA
chr13	21176652	21177512	21176652	21177512	+	transcript82.chr13.nnic@MRPL57	transcript82.chr13.nnic	protein_coding	21176652,21176862	21176717,21177512	Gene ID= ENSG00000173141.4 TPM= 8.69 Transcript Type= NA
chr13	21176652	21178011	21176652	21178011	+	transcript84.chr13.nnic@MRPL57	transcript84.chr13.nnic	protein_coding	21176652,21176862	21176717,21178011	Gene ID= ENSG00000173141.4 TPM= 4.83 Transcript Type= NA
chr13	21176645	21179084	21176645	21179084	+	ENST00000309594.4@MRPL57	ENST00000309594.4	protein_coding	21176645,21176912	21176717,21179084	Gene ID= ENSG00000173141.4 TPM= 8.69 Transcript Type= protein_coding
chr13	21494702	21604233	21494702	21604233	-	transcript102.chr13.nnic@MICU2	transcript102.chr13.nnic	protein_coding	21603939,21566797,21539657,21539302,21522603,21521245,21514353,21510004,21502926,21496052,21494702	21604233,21566944,21539688,21539377,21522650,21521327,21514418,21510101,21503097,21496160,21495842	Gene ID= ENSG00000165487.13 TPM= 1.93 Transcript Type= NA
chr13	21492700	21604214	21492700	21604214	-	ENST00000382374.8@MICU2	ENST00000382374.8	protein_coding	21603939,21566797,21539657,21539302,21522603,21521245,21514353,21510004,21502926,21496052,21495161,21492700	21604214,21566944,21539688,21539377,21522650,21521327,21514418,21510101,21503097,21496160,21495318,21493353	Gene ID= ENSG00000165487.13 TPM= 73.36 Transcript Type= protein_coding
chr13	23180936	23325165	23180936	23325165	+	transcript109.chr13.nnic@SGCG	transcript109.chr13.nnic	protein_coding	23180936,23191247,23203695,23234611,23250630,23279359,23295415,23320637,23324368	23181075,23191397,23203889,23234712,23250717,23279478,23295487,23320760,23325165	Gene ID= ENSG00000102683.7 TPM= 7.72 Transcript Type= NA
chr13	23180952	23325165	23180952	23325165	+	ENST00000218867.3@SGCG	ENST00000218867.3	protein_coding	23180952,23203695,23234611,23250630,23279359,23295415,23320637,23324368	23181075,23203889,23234712,23250717,23279478,23295487,23320760,23325165	Gene ID= ENSG00000102683.7 TPM= 33.79 Transcript Type= protein_coding
chr13	23328835	23375534	23328835	23375534	-	transcript115.chr13.nnic@SACS	transcript115.chr13.nnic	protein_coding	23375352,23375119,23371078,23368402,23365166,23358335,23354519,23353785,23346811,23328835	23375534,23375269,23371165,23368487,23365277,23358481,23356007,23353876,23346837,23329484	Gene ID= ENSG00000151835.14 TPM= 4.83 Transcript Type= NA
chr13	23353736	23375534	23353736	23375534	-	transcript119.chr13.nic@SACS	transcript119.chr13.nic	protein_coding	23375352,23375119,23371078,23368402,23365166,23358335,23354519,23353736	23375534,23375269,23371165,23368487,23365277,23358481,23356007,23353876	Gene ID= ENSG00000151835.14 TPM= 4.83 Transcript Type= NA
chr13	23730189	23889419	23730189	23889419	-	ENST00000382172.3@MIPEP	ENST00000382172.3	protein_coding	23889132,23886333,23881699,23879268,23874846,23870013,23869292,23864141,23862302,23858860,23841335,23839649,23837552,23836240,23809850,23805950,23760096,23756545,23730189	23889419,23886506,23881787,23879354,23874909,23870195,23869448,23864189,23862362,23858912,23841488,23839726,23837756,23836349,23809924,23806069,23760217,23756618,23730445	Gene ID= ENSG00000027001.9 TPM= 27.99 Transcript Type= protein_coding
chr13	24420926	24512810	24420926	24512810	-	ENST00000381989.3@PARP4	ENST00000381989.3	protein_coding	24512706,24503645,24501633,24500316,24499301,24498116,24494573,24493596,24492421,24490668,24486168,24484653,24478093,24477701,24475472,24469894,24469024,24459972,24459264,24459044,24456341,24455017,24453587,24452406,24449718,24447016,24446681,24443650,24442590,24441846,24434395,24431377,24426466,24420926	24512810,24503777,24501834,24500382,24499376,24498229,24494722,24493733,24492594,24490828,24486305,24484748,24478276,24477857,24475596,24470025,24469110,24460136,24459310,24459122,24456478,24455212,24453654,24452593,24449817,24447186,24446761,24443730,24442685,24441968,24435474,24431476,24426598,24421314	Gene ID= ENSG00000102699.5 TPM= 6.76 Transcript Type= protein_coding
chr13	25246201	25288009	25246201	25288009	-	ENST00000381801.5@MTMR6	ENST00000381801.5	protein_coding	25287224,25274071,25267779,25266129,25265819,25261668,25258560,25257736,25257196,25254385,25253764,25251853,25251649,25246201	25288009,25274187,25267941,25266286,25265947,25261802,25258692,25257845,25257321,25254434,25253964,25251984,25251775,25249492	Gene ID= ENSG00000139505.11 TPM= 4.83 Transcript Type= protein_coding
chr13	25247230	25287459	25247230	25287459	-	transcript136.chr13.nnic@MTMR6	transcript136.chr13.nnic	protein_coding	25287224,25274071,25267779,25266129,25265819,25261668,25258560,25257736,25257196,25254385,25253764,25251853,25247230	25287459,25274187,25267941,25266286,25265947,25261802,25258692,25257845,25257321,25254434,25253964,25251984,25249492	Gene ID= ENSG00000139505.11 TPM= 2.9 Transcript Type= NA
chr13	25301613	25342416	25301613	25342416	+	transcript139.chr13.nic@NUP58	transcript139.chr13.nic	protein_coding	25301613,25302927,25303102,25307806,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357,25336936,25338636,25339965	25301880,25303008,25303155,25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25331558,25337034,25338731,25342416	Gene ID= ENSG00000139496.15 TPM= 3.86 Transcript Type= NA
chr13	25301524	25342416	25301524	25342416	+	ENST00000381736.7@NUP58	ENST00000381736.7	protein_coding	25301524,25307806,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357,25336936,25338636,25339965	25301880,25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25331558,25337034,25338731,25342416	Gene ID= ENSG00000139496.15 TPM= 18.34 Transcript Type= protein_coding
chr13	25307212	25342416	25307212	25342416	+	transcript143.chr13.nnic@NUP58	transcript143.chr13.nnic	protein_coding	25307212,25307803,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357,25336936,25338636,25339965	25307637,25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25331558,25337034,25338731,25342416	Gene ID= ENSG00000139496.15 TPM= 5.79 Transcript Type= NA
chr13	25301631	25336340	25301631	25336340	+	ENST00000463407.5@NUP58	ENST00000463407.5	protein_coding	25301631,25307806,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357	25301880,25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25336340	Gene ID= ENSG00000139496.15 TPM= 5.79 Transcript Type= protein_coding
chr13	25301631	25303237	25301631	25303237	+	transcript152.chr13.nnic@NA	transcript152.chr13.nnic	NA	25301631	25303237	Gene ID= novel_gene_chr13_153 TPM= 1.93 Transcript Type= NA
chr13	26212775	26222310	26212775	26222310	-	transcript156.chr13.nnic@RNF6	transcript156.chr13.nnic	protein_coding	26221782,26221248,26219457,26218511,26215474,26212775	26222310,26221330,26219667,26218606,26215592,26214769	Gene ID= ENSG00000127870.16 TPM= 3.62 Transcript Type= NA
chr13	26212775	26222321	26212775	26222321	-	transcript157.chr13.nnic@RNF6	transcript157.chr13.nnic	protein_coding	26222003,26221248,26219457,26218511,26215474,26212775	26222321,26221330,26219667,26218606,26215592,26214769	Gene ID= ENSG00000127870.16 TPM= 3.62 Transcript Type= NA
chr13	26212775	26221703	26212775	26221703	-	ENST00000381570.7@RNF6	ENST00000381570.7	protein_coding	26221514,26221248,26219457,26218511,26212775	26221703,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 1.85 Transcript Type= protein_coding
chr13	26212775	26221841	26212775	26221841	-	transcript161.chr13.nnic@RNF6	transcript161.chr13.nnic	protein_coding	26221645,26221248,26219457,26218511,26212775	26221841,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 3.78 Transcript Type= NA
chr13	26212775	26222320	26212775	26222320	-	transcript163.chr13.nic@RNF6	transcript163.chr13.nic	protein_coding	26221835,26221248,26219457,26218511,26212775	26222320,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 9.58 Transcript Type= NA
chr13	26212768	26222493	26212768	26222493	-	ENST00000381588.8@RNF6	ENST00000381588.8	protein_coding	26222003,26221248,26219457,26218511,26212768	26222493,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 48.83 Transcript Type= protein_coding
chr13	26212762	26221842	26212762	26221842	-	ENST00000346166.7@RNF6	ENST00000346166.7	protein_coding	26221782,26221248,26219457,26218511,26212762	26221842,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 30.48 Transcript Type= protein_coding
chr13	26254169	26405238	26254169	26405238	+	transcript171.chr13.nic@CDK8	transcript171.chr13.nic	protein_coding	26254169,26337567,26349072,26353740,26382814,26385211,26393367,26396285,26397153,26400453,26401269,26401469,26403956	26254769,26337642,26349182,26353880,26382871,26385342,26393510,26396354,26397225,26400550,26401347,26401624,26405238	Gene ID= ENSG00000132964.11 TPM= 4.51 Transcript Type= NA
chr13	26254104	26405238	26254104	26405238	+	ENST00000536792.5@CDK8	ENST00000536792.5	protein_coding	26254104,26337567,26349072,26353740,26385211,26393367,26396285,26397153,26400453,26401269,26401466,26403956	26254769,26337642,26349182,26353880,26385342,26393510,26396354,26397225,26400550,26401347,26401624,26405238	Gene ID= ENSG00000132964.11 TPM= 2.58 Transcript Type= nonsense_mediated_decay
chr13	26254139	26405238	26254139	26405238	+	ENST00000381527.7@CDK8	ENST00000381527.7	protein_coding	26254139,26337567,26349072,26353740,26382814,26385211,26393367,26396285,26397153,26400453,26401269,26401466,26403956	26254769,26337642,26349182,26353880,26382871,26385342,26393510,26396354,26397225,26400550,26401347,26401624,26405238	Gene ID= ENSG00000132964.11 TPM= 11.27 Transcript Type= protein_coding
chr13	27066142	27171896	27066142	27171896	-	ENST00000282344.10@USP12	ENST00000282344.10	protein_coding	27171592,27116516,27105731,27095601,27090082,27089883,27075191,27071071,27066142	27171896,27116596,27105944,27095830,27090158,27089966,27075388,27071149,27069384	Gene ID= ENSG00000152484.13 TPM= 17.38 Transcript Type= protein_coding
chr13	27251309	27256568	27251309	27256568	+	ENST00000311549.10@RPL21	ENST00000311549.10	protein_coding	27251309,27253765,27254220,27255242,27256184,27256436	27251585,27253843,27254281,27255354,27256334,27256568	Gene ID= ENSG00000122026.10 TPM= 229.74 Transcript Type= protein_coding
chr13	27251583	27256568	27251583	27256568	+	ENST00000319826.8@RPL21	ENST00000319826.8	protein_coding	27251583,27253765,27254220,27255242,27256184,27256436	27251850,27253843,27254281,27255354,27256334,27256568	Gene ID= ENSG00000122026.10 TPM= 10.62 Transcript Type= protein_coding
chr13	27251597	27256568	27251597	27256568	+	ENST00000326092.8@RPL21	ENST00000326092.8	protein_coding	27251597,27253765,27254220,27255242,27256184,27256436	27251699,27253843,27254281,27255354,27256334,27256568	Gene ID= ENSG00000122026.10 TPM= 8.69 Transcript Type= protein_coding
chr13	27424591	27435688	27424591	27435688	+	transcript195.chr13.nnic@GTF3A	transcript195.chr13.nnic	protein_coding	27424591,27426254,27427092,27429870,27430533,27432731,27434139,27434805,27435133,27435433	27424938,27426341,27427192,27429966,27430621,27432804,27434219,27435034,27435192,27435688	Gene ID= ENSG00000122034.14 TPM= 28.73 Transcript Type= NA
chr13	27424544	27435688	27424544	27435688	+	ENST00000381140.8@GTF3A	ENST00000381140.8	protein_coding	27424544,27427092,27429870,27430533,27432731,27434139,27434805,27435133,27435433	27424938,27427192,27429966,27430621,27432804,27434219,27435034,27435192,27435688	Gene ID= ENSG00000122034.14 TPM= 138.77 Transcript Type= protein_coding
chr13	27424591	27435688	27424591	27435688	+	transcript203.chr13.nnic@GTF3A	transcript203.chr13.nnic	protein_coding	27424591,27426254,27427092,27429870,27430533,27434139,27434805,27435133,27435433	27424938,27426341,27427192,27429966,27430621,27434219,27435034,27435192,27435688	Gene ID= ENSG00000122034.14 TPM= 15.02 Transcript Type= NA
chr13	27424607	27435688	27424607	27435688	+	transcript204.chr13.nic@GTF3A	transcript204.chr13.nic	protein_coding	27424607,27427092,27429870,27430533,27432731,27434139,27434805,27435133,27435433	27424853,27427192,27429966,27430621,27432804,27434219,27435034,27435192,27435688	Gene ID= ENSG00000122034.14 TPM= 10.39 Transcript Type= NA
chr13	27424662	27435688	27424662	27435688	+	ENST00000419181.5@GTF3A	ENST00000419181.5	protein_coding	27424662,27427092,27429870,27430533,27434139,27434805,27435133,27435433	27424938,27427192,27429966,27430621,27434219,27435034,27435192,27435688	Gene ID= ENSG00000122034.14 TPM= 29.5 Transcript Type= nonsense_mediated_decay
chr13	27435643	27450311	27435643	27450311	-	transcript217.chr13.nic@MTIF3	transcript217.chr13.nic	protein_coding	27450142,27445088,27441017,27439989,27437116,27435643	27450311,27445156,27441077,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 1.93 Transcript Type= NA
chr13	27435643	27450616	27435643	27450616	-	transcript218.chr13.nic@MTIF3	transcript218.chr13.nic	protein_coding	27450509,27445088,27441017,27439989,27437116,27435643	27450616,27445156,27441077,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 2.9 Transcript Type= NA
chr13	27435643	27450586	27435643	27450586	-	transcript226.chr13.nic@MTIF3	transcript226.chr13.nic	protein_coding	27450509,27445088,27439989,27437116,27435643	27450586,27445137,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 1.93 Transcript Type= NA
chr13	27435643	27450183	27435643	27450183	-	transcript228.chr13.nic@MTIF3	transcript228.chr13.nic	protein_coding	27450064,27445088,27439989,27437116,27435643	27450183,27445156,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 7.72 Transcript Type= NA
chr13	27435643	27450467	27435643	27450467	-	transcript229.chr13.nic@MTIF3	transcript229.chr13.nic	protein_coding	27450142,27445088,27439989,27437116,27435643	27450467,27445156,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 5.79 Transcript Type= NA
chr13	27435643	27450574	27435643	27450574	-	transcript232.chr13.nnic@MTIF3	transcript232.chr13.nnic	protein_coding	27450509,27439989,27437116,27435643	27450574,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 1.93 Transcript Type= NA
chr13	27435643	27450574	27435643	27450574	-	ENST00000381120.7@MTIF3	ENST00000381120.7	protein_coding	27450509,27445088,27439989,27437116,27435643	27450574,27445156,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 37.65 Transcript Type= protein_coding
chr13	27435684	27450131	27435684	27450131	-	ENST00000461838.5@MTIF3	ENST00000461838.5	protein_coding	27450064,27445088,27439989,27437116,27435684	27450131,27445137,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 8.69 Transcript Type= processed_transcript
chr13	27620737	27666262	27620737	27666262	+	transcript240.chr13.nic@POLR1D	transcript240.chr13.nic	protein_coding	27620737,27621337,27648379,27665686	27621140,27622009,27648453,27666262	Gene ID= ENSG00000186184.16 TPM= 4.83 Transcript Type= NA
chr13	27620737	27623452	27620737	27623452	+	transcript241.chr13.nic@POLR1D	transcript241.chr13.nic	protein_coding	27620737,27621337,27622875	27621140,27622009,27623452	Gene ID= ENSG00000186184.16 TPM= 69.5 Transcript Type= NA
chr13	28659104	28678925	28659104	28678925	+	ENST00000380842.4@POMP	ENST00000380842.4	protein_coding	28659104,28662410,28664509,28668473,28672339,28678035	28659187,28662507,28664569,28668574,28672432,28678925	Gene ID= ENSG00000132963.7 TPM= 9.65 Transcript Type= protein_coding
chr13	28679422	28681318	28679422	28681318	+	transcript265.chr13.nnic@NA	transcript265.chr13.nnic	NA	28679422	28681318	Gene ID= novel_gene_chr13_266 TPM= 1.93 Transcript Type= NA
chr13	28700080	28718841	28700080	28718841	-	ENST00000266943.10@SLC46A3	ENST00000266943.10	protein_coding	28718496,28717810,28712680,28710760,28703943,28700080	28718841,28718022,28713550,28710843,28704099,28701581	Gene ID= ENSG00000139508.14 TPM= 4.83 Transcript Type= protein_coding
chr13	29764371	29850684	29764371	29850684	-	ENST00000380680.4@UBL3	ENST00000380680.4	protein_coding	29849512,29777155,29772112,29767618,29764371	29850684,29777263,29772198,29767695,29767307	Gene ID= ENSG00000122042.9 TPM= 41.51 Transcript Type= protein_coding
chr13	30460895	30465892	30460895	30465892	-	transcript292.chr13.nic@HMGB1	transcript292.chr13.nic	protein_coding	30465796,30463531,30463207,30462538,30461639,30460895	30465892,30463694,30463352,30462712,30461688,30461533	Gene ID= ENSG00000189403.14 TPM= 8.26 Transcript Type= NA
chr13	30456704	30465965	30456704	30465965	-	ENST00000341423.9@HMGB1	ENST00000341423.9	protein_coding	30465796,30463531,30463207,30462538,30456704	30465965,30463694,30463352,30462712,30461533	Gene ID= ENSG00000189403.14 TPM= 16.95 Transcript Type= protein_coding
chr13	30460907	30464904	30460907	30464904	-	transcript310.chr13.nic@HMGB1	transcript310.chr13.nic	protein_coding	30463531,30463207,30462538,30460907	30464904,30463352,30462712,30461533	Gene ID= ENSG00000189403.14 TPM= 6.97 Transcript Type= NA
chr13	30460907	30465242	30460907	30465242	-	ENST00000399494.5@HMGB1	ENST00000399494.5	protein_coding	30465073,30463531,30463207,30462538,30460907	30465242,30463694,30463352,30462712,30461533	Gene ID= ENSG00000189403.14 TPM= 10.83 Transcript Type= protein_coding
chr13	30614875	30617743	30614875	30617743	-	transcript320.chr13.nnic@NA	transcript320.chr13.nnic	NA	30614875	30617743	Gene ID= novel_gene_chr13_321 TPM= 2.9 Transcript Type= NA
chr13	30617920	30659549	30617920	30659549	+	transcript323.chr13.nic@USPL1	transcript323.chr13.nic	protein_coding	30617920,30621764,30630835,30637744,30642628,30646932,30653148,30657474	30618056,30621892,30631474,30637857,30642757,30647057,30653305,30659549	Gene ID= ENSG00000132952.11 TPM= 9.65 Transcript Type= NA
chr13	30906191	30925572	30906191	30925572	+	ENST00000380482.8@MEDAG	ENST00000380482.8	protein_coding	30906191,30917403,30921014,30921561,30924311	30906793,30917512,30921126,30921846,30925572	Gene ID= ENSG00000102802.9 TPM= 24.13 Transcript Type= protein_coding
chr13	31135049	31161927	31135049	31161927	-	ENST00000320027.9@HSPH1	ENST00000320027.9	protein_coding	31161476,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31143792,31141122,31140184,31139000,31138781,31138407,31135049	31161927,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31143923,31141259,31140309,31139107,31138900,31138568,31137524	Gene ID= ENSG00000120694.19 TPM= 6.76 Transcript Type= protein_coding
chr13	31136628	31161927	31136628	31161927	-	ENST00000380405.7@HSPH1	ENST00000380405.7	protein_coding	31161476,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31141122,31140184,31139000,31138781,31138407,31136628	31161927,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31141259,31140309,31139107,31138900,31138568,31137524	Gene ID= ENSG00000120694.19 TPM= 1.93 Transcript Type= protein_coding
chr13	31739602	31766179	31739602	31766179	+	transcript360.chr13.nic@RXFP2	transcript360.chr13.nic	protein_coding	31739602,31758258,31761724,31765037,31765956	31739706,31758404,31761801,31765142,31766179	Gene ID= ENSG00000133105.7 TPM= 1.93 Transcript Type= NA
chr13	32254109	32296613	32254109	32296613	+	transcript361.chr13.nic@FRY	transcript361.chr13.nic	protein_coding	32254109,32261616,32262314,32265450,32267170,32274842,32276464,32278465,32289633,32294368,32295202	32254394,32261816,32262475,32265616,32267359,32274991,32276562,32278548,32289743,32294570,32296613	Gene ID= ENSG00000073910.20 TPM= 4.83 Transcript Type= NA
chr13	32432787	32538825	32432787	32538825	-	transcript366.chr13.nic@N4BP2L2	transcript366.chr13.nic	protein_coding	32538778,32538618,32535769,32527408,32522182,32521373,32517857,32442388,32438652,32436361,32432787	32538825,32538684,32537027,32527532,32522270,32521449,32518003,32444126,32438737,32436405,32432972	Gene ID= ENSG00000244754.8 TPM= 6.76 Transcript Type= NA
chr13	32432787	32538823	32432787	32538823	-	transcript368.chr13.nic@N4BP2L2	transcript368.chr13.nic	protein_coding	32538618,32535769,32527408,32522182,32521373,32517857,32442388,32438652,32436361,32432787	32538823,32537027,32527532,32522270,32521449,32518003,32444126,32438737,32436405,32432972	Gene ID= ENSG00000244754.8 TPM= 6.76 Transcript Type= NA
chr13	32432787	32538819	32432787	32538819	-	transcript370.chr13.nic@N4BP2L2	transcript370.chr13.nic	protein_coding	32538778,32535769,32527408,32522182,32521373,32517857,32442388,32438652,32436361,32432787	32538819,32537027,32527532,32522270,32521449,32518003,32444126,32438737,32436405,32432972	Gene ID= ENSG00000244754.8 TPM= 3.86 Transcript Type= NA
chr13	32443697	32538833	32443697	32538833	-	ENST00000505213.5@N4BP2L2	ENST00000505213.5	protein_coding	32538618,32535769,32527408,32522182,32521373,32517857,32443697	32538833,32537027,32527532,32522270,32521449,32518003,32444126	Gene ID= ENSG00000244754.8 TPM= 2.9 Transcript Type= protein_coding
chr13	32444076	32538824	32444076	32538824	-	transcript376.chr13.nnic@N4BP2L2	transcript376.chr13.nnic	protein_coding	32538683,32535769,32527408,32522182,32521373,32517857,32444076	32538824,32537027,32527532,32522270,32521449,32518003,32444126	Gene ID= ENSG00000244754.8 TPM= 2.9 Transcript Type= NA
chr13	32517621	32538825	32517621	32538825	-	transcript379.chr13.nic@N4BP2L2	transcript379.chr13.nic	protein_coding	32538778,32538618,32535769,32527408,32522182,32521373,32517621	32538825,32538684,32537027,32527532,32522270,32521449,32518003	Gene ID= ENSG00000244754.8 TPM= 2.9 Transcript Type= NA
chr13	32516894	32538872	32516894	32538872	-	transcript382.chr13.nic@N4BP2L2	transcript382.chr13.nic	protein_coding	32538778,32535769,32527408,32522182,32521373,32516894	32538872,32537027,32527532,32522270,32521449,32518003	Gene ID= ENSG00000244754.8 TPM= 1.93 Transcript Type= NA
chr13	32517621	32538824	32517621	32538824	-	transcript384.chr13.nnic@N4BP2L2	transcript384.chr13.nnic	protein_coding	32538683,32535769,32527408,32522182,32521373,32517621	32538824,32537027,32527532,32522270,32521449,32518003	Gene ID= ENSG00000244754.8 TPM= 2.9 Transcript Type= NA
chr13	32526819	32538823	32526819	32538823	-	transcript386.chr13.nic@N4BP2L2	transcript386.chr13.nic	protein_coding	32538618,32535769,32526819	32538823,32537027,32527532	Gene ID= ENSG00000244754.8 TPM= 1.93 Transcript Type= NA
chr13	32526819	32538824	32526819	32538824	-	transcript387.chr13.nnic@N4BP2L2	transcript387.chr13.nnic	protein_coding	32538683,32535769,32526819	32538824,32537027,32527532	Gene ID= ENSG00000244754.8 TPM= 1.93 Transcript Type= NA
chr13	32586427	32778019	32586427	32778019	+	ENST00000315596.14@PDS5B	ENST00000315596.14	protein_coding	32586427,32648754,32651804,32658239,32658434,32659154,32667764,32673216,32675844,32678835,32683878,32687134,32688456,32694223,32696854,32699730,32701323,32706934,32709946,32732101,32735172,32741080,32742591,32745977,32753332,32755842,32758087,32758534,32759628,32760575,32764489,32770121,32770654,32773189,32775017	32586593,32648880,32652007,32658325,32658531,32659280,32667844,32673356,32675959,32678929,32684023,32687285,32688569,32694304,32696902,32699869,32701438,32707039,32710106,32732224,32735330,32741148,32742727,32746100,32753536,32755956,32758219,32758653,32759690,32760720,32764594,32770560,32770761,32773324,32778019	Gene ID= ENSG00000083642.18 TPM= 3.86 Transcript Type= protein_coding
chr13	33103135	33285755	33103135	33285755	-	ENST00000336934.9@STARD13	ENST00000336934.9	protein_coding	33285470,33167551,33165337,33142310,33128929,33127373,33126081,33118065,33112721,33111778,33110686,33109873,33106758,33103135	33285755,33167622,33165418,33142373,33130289,33127546,33126240,33118263,33112931,33111892,33110907,33110090,33106934,33105710	Gene ID= ENSG00000133121.20 TPM= 5.79 Transcript Type= protein_coding
chr13	33127145	33131600	33127145	33131600	+	transcript403.chr13.nnic@NA	transcript403.chr13.nnic	NA	33127145	33131600	Gene ID= novel_gene_chr13_404 TPM= 1.93 Transcript Type= NA
chr13	33284729	33285712	33284729	33285712	-	transcript405.chr13.nnic@NA	transcript405.chr13.nnic	NA	33284729	33285712	Gene ID= novel_gene_chr13_406 TPM= 2.9 Transcript Type= NA
chr13	33818049	33837496	33818049	33837496	+	ENST00000380071.7@RFC3	ENST00000380071.7	protein_coding	33818049,33821132,33823917,33825789,33829836,33830719,33831256,33835148,33836104	33818265,33821269,33823984,33825886,33830017,33830855,33831354,33835217,33837496	Gene ID= ENSG00000133119.12 TPM= 4.83 Transcript Type= protein_coding
chr13	34942280	35195901	34942280	35195901	+	transcript410.chr13.nic@NBEA	transcript410.chr13.nic	protein_coding	34942280,35040933,35044947,35045306,35048563,35050269,35056010,35058717,35069908,35070719,35098297,35109290,35110810,35117414,35118228,35118377,35123482,35142269,35155774,35156083,35157078,35159016,35161750,35164356,35168987,35171272,35173464,35176996,35182360,35183976,35195864	34943114,35041164,35045047,35045401,35048684,35050395,35056129,35058863,35070105,35070852,35098405,35109442,35110978,35117493,35118290,35118474,35123574,35142377,35155855,35156206,35157270,35160032,35161967,35164509,35168995,35171452,35173594,35177103,35182528,35184071,35195901	Gene ID= ENSG00000172915.18 TPM= 1.93 Transcript Type= NA
chr13	35474182	35477209	35474182	35477209	-	ENST00000379919.5@MAB21L1	ENST00000379919.5	protein_coding	35474182	35477209	Gene ID= ENSG00000180660.7 TPM= 4.83 Transcript Type= protein_coding
chr13	36301640	36346797	36301640	36346797	-	ENST00000451493.5@SPART	ENST00000451493.5	protein_coding	36346582,36335021,36331399,36329362,36326575,36314227,36312319,36312145,36301640	36346797,36335832,36331596,36329517,36326698,36314421,36312477,36312235,36304632	Gene ID= ENSG00000133104.12 TPM= 1.93 Transcript Type= protein_coding
chr13	36819224	36829104	36819224	36829104	+	ENST00000255476.2@RFXAP	ENST00000255476.2	protein_coding	36819224,36825428,36827643	36819957,36825535,36829104	Gene ID= ENSG00000133111.3 TPM= 2.9 Transcript Type= protein_coding
chr13	36949849	36999341	36949849	36999341	-	transcript456.chr13.nnic@ALG5	transcript456.chr13.nnic	protein_coding	36999235,36995425,36994989,36993604,36989484,36971977,36965575,36952514,36949849	36999341,36995596,36995035,36993672,36989576,36972036,36965726,36952599,36950057	Gene ID= ENSG00000120697.8 TPM= 1.93 Transcript Type= NA
chr13	36949849	36999394	36949849	36999394	-	transcript457.chr13.nnic@ALG5	transcript457.chr13.nnic	protein_coding	36999235,36995425,36994989,36993604,36989484,36985627,36971977,36952514,36949849	36999394,36995596,36995035,36993672,36989576,36985740,36972036,36952599,36950057	Gene ID= ENSG00000120697.8 TPM= 2.9 Transcript Type= NA
chr13	36949849	36999394	36949849	36999394	-	transcript459.chr13.nnic@ALG5	transcript459.chr13.nnic	protein_coding	36999235,36995425,36994989,36993604,36989484,36985627,36952514,36949849	36999394,36995596,36995035,36993672,36989576,36985740,36952599,36950057	Gene ID= ENSG00000120697.8 TPM= 1.93 Transcript Type= NA
chr13	36949830	36999367	36949830	36999367	-	ENST00000239891.3@ALG5	ENST00000239891.3	protein_coding	36999235,36995425,36994989,36993604,36989484,36985627,36971977,36965575,36952514,36949830	36999367,36995596,36995035,36993672,36989576,36985740,36972036,36965726,36952599,36950057	Gene ID= ENSG00000120697.8 TPM= 30.89 Transcript Type= protein_coding
chr13	37000782	37009614	37000782	37009614	+	transcript489.chr13.nic@EXOSC8	transcript489.chr13.nic	protein_coding	37000782,37002273,37002488,37002934,37004516,37005920,37006115,37006975,37008057,37008729	37000822,37002309,37002551,37003007,37004561,37006025,37006160,37007071,37008177,37009614	Gene ID= ENSG00000120699.12 TPM= 2.9 Transcript Type= NA
chr13	37000789	37009401	37000789	37009401	+	transcript490.chr13.nic@EXOSC8	transcript490.chr13.nic	protein_coding	37000789,37002273,37002488,37002934,37005920,37006115,37006975,37008057,37008729,37009184	37000822,37002309,37002551,37004561,37006025,37006160,37007071,37008177,37008835,37009401	Gene ID= ENSG00000120699.12 TPM= 1.93 Transcript Type= NA
chr13	37009316	37059713	37009316	37059713	-	ENST00000360252.8@SUPT20H	ENST00000360252.8	protein_coding	37059559,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009316	37059713,37051583,37048599,37047936,37047601,37045376,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022080,37021602,37019397,37017364,37012297,37009809	Gene ID= ENSG00000102710.19 TPM= 1.93 Transcript Type= protein_coding
chr13	37023549	37059697	37023549	37059697	-	transcript481.chr13.nic@SUPT20H	transcript481.chr13.nic	protein_coding	37059559,37051488,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37023549	37059697,37051583,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193	Gene ID= ENSG00000102710.19 TPM= 1.93 Transcript Type= NA
chr13	37009494	37059650	37009494	37059650	-	ENST00000356185.7@SUPT20H	ENST00000356185.7	protein_coding	37059480,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009494	37059650,37051583,37048599,37047936,37047601,37045376,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022080,37021602,37019397,37017364,37012297,37009809	Gene ID= ENSG00000102710.19 TPM= 1.93 Transcript Type= protein_coding
chr13	37562583	37598844	37562583	37598844	-	ENST00000541179.5@POSTN	ENST00000541179.5	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37571369,37570580,37569744,37564519,37562583	37598844,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37571458,37570669,37569821,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 1.93 Transcript Type= protein_coding
chr13	37562634	37598758	37562634	37598758	-	ENST00000379742.4@POSTN	ENST00000379742.4	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37570580,37569744,37569300,37564519,37562634	37598758,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37570669,37569821,37569383,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 2.9 Transcript Type= protein_coding
chr13	38349800	38363003	38349800	38363003	+	transcript504.chr13.nnic@UFM1	transcript504.chr13.nnic	protein_coding	38349800,38349999,38354239,38358093,38359301,38360041	38349921,38350055,38354296,38358132,38359333,38363003	Gene ID= ENSG00000120686.11 TPM= 18.34 Transcript Type= NA
chr13	38349881	38363619	38349881	38363619	+	ENST00000239878.8@UFM1	ENST00000239878.8	protein_coding	38349881,38349999,38354239,38358093,38359301,38360711	38349921,38350055,38354296,38358132,38359333,38363619	Gene ID= ENSG00000120686.11 TPM= 1.93 Transcript Type= protein_coding
chr13	38349853	38362998	38349853	38362998	+	transcript513.chr13.nic@UFM1	transcript513.chr13.nic	protein_coding	38349853,38349999,38354239,38358093,38359301	38349921,38350055,38354296,38358132,38362998	Gene ID= ENSG00000120686.11 TPM= 3.86 Transcript Type= NA
chr13	39011139	39038095	39011139	39038095	-	transcript515.chr13.nnic@PROSER1	transcript515.chr13.nnic	protein_coding	39037198,39034131,39031563,39029281,39028227,39026277,39024473,39023052,39022326,39017500,39012083,39011139	39038095,39034196,39031631,39029375,39028320,39026387,39024556,39023130,39022412,39017544,39012233,39011487	Gene ID= ENSG00000120685.19 TPM= 1.93 Transcript Type= NA
chr13	39038318	39050109	39038318	39050109	+	ENST00000379600.7@NHLRC3	ENST00000379600.7	protein_coding	39038318,39039136,39039564,39042105,39044090,39047040,39047674	39038723,39039288,39039711,39042305,39044181,39047152,39050109	Gene ID= ENSG00000188811.13 TPM= 2.9 Transcript Type= protein_coding
chr13	39342892	39603171	39342892	39603171	-	ENST00000379589.3@LHFPL6	ENST00000379589.3	protein_coding	39602883,39600832,39378428,39342892	39603171,39601390,39378526,39344054	Gene ID= ENSG00000183722.7 TPM= 47.3 Transcript Type= protein_coding
chr13	39598288	39603171	39598288	39603171	-	transcript520.chr13.nic@LHFPL6	transcript520.chr13.nic	protein_coding	39602883,39598288	39603171,39601390	Gene ID= ENSG00000183722.7 TPM= 5.79 Transcript Type= NA
chr13	40558916	40667612	40558916	40667612	-	transcript538.chr13.nic@FOXO1	transcript538.chr13.nic	protein_coding	40665583,40558916	40667612,40560860	Gene ID= ENSG00000150907.7 TPM= 13.68 Transcript Type= NA
chr13	40555667	40666597	40555667	40666597	-	ENST00000379561.5@FOXO1	ENST00000379561.5	protein_coding	40665583,40559509,40555667	40666597,40560860,40559034	Gene ID= ENSG00000150907.7 TPM= 55.02 Transcript Type= protein_coding
chr13	40658222	40659329	40658222	40659329	+	transcript542.chr13.nnic@NA	transcript542.chr13.nnic	NA	40658222	40659329	Gene ID= novel_gene_chr13_543 TPM= 7.72 Transcript Type= NA
chr13	40729296	40771198	40729296	40771198	-	transcript551.chr13.nnic@MRPS31	transcript551.chr13.nnic	protein_coding	40771012,40766746,40758948,40756873,40754019,40749138,40729296	40771198,40767033,40759106,40757013,40754092,40749281,40729601	Gene ID= ENSG00000102738.7 TPM= 1.93 Transcript Type= NA
chr13	40729296	40771199	40729296	40771199	-	transcript552.chr13.nnic@MRPS31	transcript552.chr13.nnic	protein_coding	40770985,40758948,40756873,40754019,40749138,40729296	40771199,40759106,40757013,40754092,40749281,40729601	Gene ID= ENSG00000102738.7 TPM= 1.93 Transcript Type= NA
chr13	40756883	40771211	40756883	40771211	-	transcript554.chr13.nic@MRPS31	transcript554.chr13.nic	protein_coding	40770985,40766746,40758948,40756883	40771211,40767033,40759106,40757013	Gene ID= ENSG00000102738.7 TPM= 6.76 Transcript Type= NA
chr13	40789400	40812458	40789400	40812458	+	transcript556.chr13.nnic@SLC25A15	transcript556.chr13.nnic	protein_coding	40789400,40793158,40799057,40805118,40807294,40808438,40809543,40811444	40789663,40793281,40799315,40805255,40807463,40808596,40810184,40812458	Gene ID= ENSG00000102743.14 TPM= 2.9 Transcript Type= NA
chr13	40932028	41061250	40932028	41061250	-	transcript568.chr13.nic@ELF1	transcript568.chr13.nic	protein_coding	41060838,40981983,40958836,40951329,40949806,40943842,40942952,40940921,40932028	41061250,40982282,40959016,40951436,40949973,40943925,40943144,40941370,40934028	Gene ID= ENSG00000120690.15 TPM= 5.79 Transcript Type= NA
chr13	41061491	41076238	41061491	41076238	+	transcript570.chr13.nic@WBP4	transcript570.chr13.nic	protein_coding	41061491,41062644,41065016,41065164,41068561,41071527,41072782,41076044	41061675,41062716,41065078,41065287,41068737,41071573,41072857,41076238	Gene ID= ENSG00000120688.8 TPM= 11.58 Transcript Type= NA
chr13	41061256	41063067	41061256	41063067	+	transcript577.chr13.nic@WBP4	transcript577.chr13.nic	protein_coding	41061256,41062644	41061675,41063067	Gene ID= ENSG00000120688.8 TPM= 2.9 Transcript Type= NA
chr13	41252284	41263576	41252284	41263576	-	transcript585.chr13.nic@MTRF1	transcript585.chr13.nic	protein_coding	41263485,41262215,41261691,41260493,41254529,41252949,41252284	41263576,41262331,41261825,41260915,41254620,41253030,41252752	Gene ID= ENSG00000120662.15 TPM= 1.93 Transcript Type= NA
chr13	41311290	41377030	41311290	41377030	+	transcript589.chr13.nic@NAA16	transcript589.chr13.nic	protein_coding	41311290,41316846,41318806,41320667,41323056,41325698,41328724,41331274,41355144,41358304,41358810,41362031,41362731,41367439,41369090,41372203,41372732,41373637,41374742,41375405	41311582,41316930,41318910,41320824,41323190,41325851,41328843,41331369,41355216,41358473,41358962,41362159,41362873,41367652,41369283,41372311,41372830,41373780,41374839,41377030	Gene ID= ENSG00000172766.18 TPM= 1.93 Transcript Type= NA
chr13	41311244	41333524	41311244	41333524	+	transcript597.chr13.nnic@NAA16	transcript597.chr13.nnic	protein_coding	41311244,41316846,41318806,41320667,41323056,41325698,41328724,41331274,41332081	41311582,41316930,41318910,41320824,41323190,41325851,41328843,41331369,41333524	Gene ID= ENSG00000172766.18 TPM= 1.93 Transcript Type= NA
chr13	41311282	41358718	41311282	41358718	+	ENST00000476980.5@NAA16	ENST00000476980.5	protein_coding	41311282,41316846,41318806,41320667,41323056,41325698,41328724,41331274,41355144,41358304	41311582,41316930,41318910,41320824,41323190,41325851,41328843,41331369,41355216,41358718	Gene ID= ENSG00000172766.18 TPM= 2.9 Transcript Type= processed_transcript
chr13	41457559	41470882	41457559	41470882	+	ENST00000379359.3@RGCC	ENST00000379359.3	protein_coding	41457559,41458285,41466823,41468776,41470478	41457756,41458470,41466930,41468838,41470882	Gene ID= ENSG00000102760.12 TPM= 23.17 Transcript Type= protein_coding
chr13	41719337	41961120	41719337	41961120	-	ENST00000281496.6@VWA8	ENST00000281496.6	protein_coding	41960853,41949936,41912038,41907586,41891420,41887197,41886781,41885920,41883387,41868346,41865902,41865736,41833371,41830529,41819218,41816698,41811225,41787437,41783795,41777985,41761128,41732080,41729542,41727194,41721370,41719337	41961120,41950013,41912168,41907696,41891587,41887361,41886830,41886028,41883491,41868477,41866036,41865813,41833531,41830642,41819386,41816775,41811340,41787543,41783901,41778056,41761204,41732155,41729677,41727313,41721575,41719742	Gene ID= ENSG00000102763.17 TPM= 2.9 Transcript Type= protein_coding
chr13	43023599	43107408	43023599	43107408	+	transcript610.chr13.nnic@DNAJC15	transcript610.chr13.nnic	protein_coding	43023599,43065686,43068930,43078612,43085768,43088776,43107178	43023734,43065737,43069003,43078688,43085838,43088819,43107408	Gene ID= ENSG00000120675.5 TPM= 1.93 Transcript Type= NA
chr13	43023203	43114224	43023203	43114224	+	ENST00000379221.3@DNAJC15	ENST00000379221.3	protein_coding	43023203,43065686,43068930,43078612,43085768,43107178	43023734,43065737,43069003,43078688,43085838,43114224	Gene ID= ENSG00000120675.5 TPM= 3.86 Transcript Type= protein_coding
chr13	44432143	44437254	44432143	44437254	-	ENST00000622051.1@TSC22D1	ENST00000622051.1	protein_coding	44437176,44436044,44432143	44437254,44436095,44434883	Gene ID= ENSG00000102804.14 TPM= 2.9 Transcript Type= protein_coding
chr13	44433519	44576565	44433519	44576565	-	ENST00000458659.2@TSC22D1	ENST00000458659.2	protein_coding	44573163,44436044,44433519	44576565,44436095,44434883	Gene ID= ENSG00000102804.14 TPM= 169.58 Transcript Type= protein_coding
chr13	44939249	44989483	44939249	44989483	-	ENST00000379161.4@NUFIP1	ENST00000379161.4	protein_coding	44989025,44982072,44980722,44979890,44979190,44965844,44959381,44949722,44943442,44939249	44989483,44982154,44980820,44979952,44979266,44965936,44959574,44949838,44943674,44941322	Gene ID= ENSG00000083635.7 TPM= 1.93 Transcript Type= protein_coding
chr13	44989597	45030282	44989597	45030282	+	transcript653.chr13.nic@GPALPP1	transcript653.chr13.nic	protein_coding	44989597,45004305,45006202,45008795,45014952,45015432,45020330,45027785,45029239	44989742,45004437,45006303,45008879,45015083,45015596,45020428,45028003,45030282	Gene ID= ENSG00000133114.17 TPM= 1.93 Transcript Type= NA
chr13	44989552	45028270	44989552	45028270	+	ENST00000379151.8@GPALPP1	ENST00000379151.8	protein_coding	44989552,45004305,45006202,45008795,45014952,45015432,45020330,45027785	44989742,45004437,45006303,45008879,45015083,45015596,45020428,45028270	Gene ID= ENSG00000133114.17 TPM= 1.93 Transcript Type= protein_coding
chr13	45120467	45252970	45120467	45252970	+	transcript665.chr13.nnic@GTF2F2	transcript665.chr13.nnic	protein_coding	45120467,45136733,45149770,45151687,45207424,45220866,45252871	45120721,45136806,45149788,45151831,45207505,45220909,45252970	Gene ID= ENSG00000188342.11 TPM= 1.93 Transcript Type= NA
chr13	45120467	45267252	45120467	45267252	+	transcript666.chr13.nic@GTF2F2	transcript666.chr13.nic	protein_coding	45120467,45136733,45149770,45151687,45207424,45252871,45267233	45120721,45136806,45149788,45151831,45207505,45252970,45267252	Gene ID= ENSG00000188342.11 TPM= 1.93 Transcript Type= NA
chr13	45120515	45284909	45120515	45284909	+	ENST00000340473.7@GTF2F2	ENST00000340473.7	protein_coding	45120515,45136733,45149770,45151687,45207424,45252871,45267233,45283442	45120721,45136806,45149788,45151831,45207505,45252970,45267376,45284909	Gene ID= ENSG00000188342.11 TPM= 1.93 Transcript Type= protein_coding
chr13	45333471	45341370	45333471	45341370	-	ENST00000530705.5@TPT1	ENST00000530705.5	protein_coding	45341042,45340712,45339994,45339497,45338660,45333471	45341370,45340785,45340184,45339602,45338776,45337388	Gene ID= ENSG00000133112.16 TPM= 1327.06 Transcript Type= protein_coding
chr13	45336873	45341212	45336873	45341212	-	ENST00000379056.5@TPT1	ENST00000379056.5	protein_coding	45341042,45339994,45339497,45338660,45336873	45341212,45340184,45339602,45338776,45337388	Gene ID= ENSG00000133112.16 TPM= 174.72 Transcript Type= protein_coding
chr13	45337198	45341122	45337198	45341122	-	ENST00000379060.8@TPT1	ENST00000379060.8	protein_coding	45341038,45340712,45339994,45339497,45338660,45337198	45341122,45340785,45340184,45339602,45338776,45337388	Gene ID= ENSG00000133112.16 TPM= 279.94 Transcript Type= protein_coding
chr13	45348917	45349578	45348917	45349578	-	transcript701.chr13.nnic@NA	transcript701.chr13.nnic	NA	45348917	45349578	Gene ID= novel_gene_chr13_702 TPM= 1.93 Transcript Type= NA
chr13	45393316	45418383	45393316	45418383	-	transcript704.chr13.nnic@SLC25A30	transcript704.chr13.nnic	protein_coding	45418231,45411362,45408927,45405883,45404327,45402275,45401083,45398940,45397258,45393316	45418383,45411480,45409074,45405977,45404412,45402370,45401207,45399078,45397338,45396015	Gene ID= ENSG00000174032.16 TPM= 3.14 Transcript Type= NA
chr13	45393321	45418383	45393321	45418383	-	transcript707.chr13.nnic@SLC25A30	transcript707.chr13.nnic	protein_coding	45418231,45411362,45408927,45405883,45404327,45402275,45401083,45398940,45393321	45418383,45411480,45409074,45405977,45404412,45402370,45401207,45399078,45396318	Gene ID= ENSG00000174032.16 TPM= 2.17 Transcript Type= NA
chr13	45393321	45418387	45393321	45418387	-	transcript708.chr13.nnic@SLC25A30	transcript708.chr13.nnic	protein_coding	45418300,45411362,45408927,45405883,45404327,45402275,45401083,45398940,45393321	45418387,45411480,45409074,45405977,45404412,45402370,45401207,45399078,45396318	Gene ID= ENSG00000174032.16 TPM= 2.17 Transcript Type= NA
chr13	45393316	45418380	45393316	45418380	-	ENST00000519676.5@SLC25A30	ENST00000519676.5	protein_coding	45418300,45411362,45408927,45405883,45404327,45402275,45401083,45398940,45397258,45393316	45418380,45411480,45409074,45405977,45404412,45402370,45401207,45399078,45397338,45396015	Gene ID= ENSG00000174032.16 TPM= 19.55 Transcript Type= protein_coding
chr13	45464925	45536630	45464925	45536630	+	ENST00000349995.9@COG3	ENST00000349995.9	protein_coding	45464925,45476201,45479005,45480125,45481230,45482381,45483230,45486495,45490915,45491412,45492159,45493347,45496152,45503244,45509692,45511765,45516143,45518762,45518960,45524976,45529791,45530682,45534702	45465210,45476347,45479066,45480290,45481304,45482473,45483355,45486575,45490958,45491538,45492250,45493486,45496312,45503349,45509816,45511854,45516263,45518850,45519094,45525051,45529918,45530780,45536630	Gene ID= ENSG00000136152.14 TPM= 7.72 Transcript Type= protein_coding
chr13	45464921	45536630	45464921	45536630	+	transcript714.chr13.nnic@COG3	transcript714.chr13.nnic	protein_coding	45464921,45476201,45479005,45480125,45481230,45482381,45486495,45490915,45491412,45492159,45493347,45496152,45503244,45509692,45511765,45516143,45518762,45518960,45524976,45529791,45530682,45534702	45465210,45476347,45479066,45480290,45481304,45482473,45486575,45490958,45491538,45492250,45493486,45496312,45503349,45509816,45511854,45516263,45518850,45519094,45525051,45529918,45530780,45536630	Gene ID= ENSG00000136152.14 TPM= 3.86 Transcript Type= NA
chr13	45975607	46052780	45975607	46052780	-	transcript727.chr13.nnic@ZC3H13	transcript727.chr13.nnic	protein_coding	46052404,46045391,46044955,46042164,46020449,46011415,46010348,46003139,45988787,45985297,45979813,45976182,45975607	46052780,46045516,46045064,46042275,46020557,46011554,46010505,46003336,45989097,45985761,45980004,45976265,45975838	Gene ID= ENSG00000123200.16 TPM= 2.25 Transcript Type= NA
chr13	45975498	46052780	45975498	46052780	-	transcript729.chr13.nnic@ZC3H13	transcript729.chr13.nnic	protein_coding	46052404,46045391,46044955,46042164,46020449,46011415,46010348,46003139,45988787,45985297,45979813,45975498	46052780,46045516,46045064,46042275,46020557,46011554,46010505,46003336,45989097,45985761,45980004,45975838	Gene ID= ENSG00000123200.16 TPM= 2.25 Transcript Type= NA
chr13	45962176	46052759	45962176	46052759	-	ENST00000282007.7@ZC3H13	ENST00000282007.7	protein_coding	46052698,46045391,46044955,46042164,46020449,46011415,46010348,46003139,45988787,45985297,45979813,45975283,45970362,45968748,45967504,45965280,45962176	46052759,46045516,46045064,46042275,46020557,46011554,46010505,46003336,45989097,45985761,45980004,45975838,45970465,45969971,45968028,45965432,45964042	Gene ID= ENSG00000123200.16 TPM= 2.9 Transcript Type= protein_coding
chr13	45954465	46052746	45954465	46052746	-	ENST00000242848.8@ZC3H13	ENST00000242848.8	protein_coding	46052404,46045391,46044955,46042164,46020449,46011415,46010348,46003139,45988787,45985297,45979813,45975283,45970362,45968748,45967504,45965280,45963842,45959483,45954465	46052746,46045513,46045064,46042275,46020557,46011554,46010505,46003336,45989097,45985761,45980004,45975838,45970465,45969971,45968028,45965429,45964042,45959646,45957297	Gene ID= ENSG00000123200.16 TPM= 1.93 Transcript Type= protein_coding
chr13	46125920	46211348	46125920	46211348	-	ENST00000398576.6@LCP1	ENST00000398576.6	protein_coding	46211293,46203101,46183909,46182111,46159599,46158826,46158522,46156438,46154805,46152780,46150936,46148352,46146908,46144442,46143290,46142292,46134127,46130814,46125920	46211348,46203230,46183972,46182225,46159686,46158989,46158651,46156570,46154886,46152945,46151078,46148447,46147103,46144520,46143404,46142425,46134250,46130938,46127723	Gene ID= ENSG00000136167.13 TPM= 4.83 Transcript Type= protein_coding
chr13	46553168	46753040	46553168	46753040	+	ENST00000311191.10@LRCH1	ENST00000311191.10	protein_coding	46553168,46650201,46669030,46681741,46685905,46687852,46689133,46692536,46694893,46699336,46701121,46705068,46705268,46711791,46712525,46723221,46728847,46733921,46750540	46553703,46650345,46669156,46681846,46686041,46687979,46689196,46692641,46695017,46699403,46701207,46705157,46705304,46711844,46712597,46723330,46728984,46733998,46753040	Gene ID= ENSG00000136141.14 TPM= 1.93 Transcript Type= protein_coding
chr13	46771256	46797232	46771256	46797232	-	ENST00000378720.7@ESD	ENST00000378720.7	protein_coding	46797105,46793397,46791346,46787021,46784252,46782667,46781496,46779935,46777456,46771256	46797232,46793444,46791420,46787109,46784350,46782791,46781615,46780033,46777623,46771496	Gene ID= ENSG00000139684.13 TPM= 56.95 Transcript Type= protein_coding
chr13	46775386	46797183	46775386	46797183	-	transcript753.chr13.nic@ESD	transcript753.chr13.nic	protein_coding	46797105,46793397,46791346,46787021,46784252,46782667,46781496,46779935,46775386	46797183,46793444,46791420,46787109,46784350,46782791,46781615,46780033,46777623	Gene ID= ENSG00000139684.13 TPM= 1.93 Transcript Type= NA
chr13	47942656	48001354	47942656	48001354	-	ENST00000378654.8@SUCLA2	ENST00000378654.8	protein_coding	48001180,47996843,47988882,47988541,47973264,47968595,47954396,47954140,47949483,47948940,47942656	48001354,47997023,47988981,47988703,47973392,47968733,47954557,47954282,47949603,47949028,47943445	Gene ID= ENSG00000136143.14 TPM= 297.03 Transcript Type= protein_coding
chr13	48037567	48047222	48037567	48047222	+	ENST00000258662.2@NUDT15	ENST00000258662.2	protein_coding	48037567,48040920,48045660	48037904,48041116,48047222	Gene ID= ENSG00000136159.3 TPM= 24.13 Transcript Type= protein_coding
chr13	48053323	48095102	48053323	48095102	-	transcript785.chr13.nic@MED4	transcript785.chr13.nic	protein_coding	48094954,48090352,48086282,48083371,48081645,48079844,48077153,48053323	48095102,48090418,48086452,48083428,48081731,48079975,48077311,48053491	Gene ID= ENSG00000136146.14 TPM= 10.62 Transcript Type= NA
chr13	48053323	48095120	48053323	48095120	-	transcript786.chr13.nic@MED4	transcript786.chr13.nic	protein_coding	48095060,48090352,48086282,48083371,48081645,48079844,48077153,48053323	48095120,48090418,48086452,48083428,48081731,48079975,48077311,48053491	Gene ID= ENSG00000136146.14 TPM= 9.65 Transcript Type= NA
chr13	48076968	48095131	48076968	48095131	-	ENST00000378586.5@MED4	ENST00000378586.5	protein_coding	48095060,48090352,48086282,48083371,48081645,48079844,48076968	48095131,48090418,48086452,48083428,48081731,48079975,48077311	Gene ID= ENSG00000136146.14 TPM= 1.93 Transcript Type= protein_coding
chr13	48075956	48095104	48075956	48095104	-	ENST00000258648.6@MED4	ENST00000258648.6	protein_coding	48094954,48090352,48086282,48083371,48081645,48079844,48075956	48095104,48090418,48086452,48083428,48081731,48079975,48077311	Gene ID= ENSG00000136146.14 TPM= 17.38 Transcript Type= protein_coding
chr13	48092283	48095104	48092283	48095104	-	transcript800.chr13.nnic@NA	transcript800.chr13.nnic	NA	48092283	48095104	Gene ID= novel_gene_chr13_801 TPM= 1.93 Transcript Type= NA
chr13	48410615	48413111	48410615	48413111	-	transcript813.chr13.nnic@NA	transcript813.chr13.nnic	NA	48410615	48413111	Gene ID= novel_gene_chr13_814 TPM= 1.93 Transcript Type= NA
chr13	48488959	48533233	48488959	48533233	-	ENST00000344532.7@RCBTB2	ENST00000344532.7	protein_coding	48533028,48524659,48522308,48521898,48515586,48515205,48512729,48512016,48511770,48510629,48502724,48501742,48499621,48496191,48488959	48533233,48524757,48522403,48521962,48515741,48515355,48512895,48512174,48511877,48510771,48502914,48501868,48499760,48496321,48490251	Gene ID= ENSG00000136161.12 TPM= 1.93 Transcript Type= protein_coding
chr13	48974966	48976520	48974966	48976520	-	transcript828.chr13.nnic@NA	transcript828.chr13.nnic	NA	48974966	48976520	Gene ID= novel_gene_chr13_829 TPM= 3.86 Transcript Type= NA
chr13	48975632	49136591	48975632	49136591	+	transcript826.chr13.nic@FNDC3A	transcript826.chr13.nic	protein_coding	48975632,49006152,49075289,49114655,49131137,49136332	48976177,49006289,49075364,49114731,49131374,49136591	Gene ID= ENSG00000102531.16 TPM= 3.86 Transcript Type= NA
chr13	49247925	49293485	49247925	49293485	+	ENST00000251108.10@CDADC1	ENST00000251108.10	protein_coding	49247925,49248871,49255839,49259346,49267490,49274291,49278350,49280509,49286222,49291684	49248119,49248965,49255913,49259523,49268059,49274340,49278519,49280698,49286282,49293485	Gene ID= ENSG00000102543.14 TPM= 2.9 Transcript Type= protein_coding
chr13	49247947	49267785	49247947	49267785	+	ENST00000466868.1@CDADC1	ENST00000466868.1	protein_coding	49247947,49248871,49255839,49259486,49267490	49248119,49248965,49255913,49259523,49267785	Gene ID= ENSG00000102543.14 TPM= 1.93 Transcript Type= processed_transcript
chr13	49531946	49585583	49531946	49585583	-	ENST00000378302.6@RCBTB1	ENST00000378302.6	protein_coding	49585444,49580505,49567154,49566618,49559918,49555515,49552178,49551326,49549458,49544737,49541676,49540876,49531946	49585583,49580584,49567320,49566768,49560084,49555673,49552285,49551468,49549648,49544863,49541827,49541006,49534262	Gene ID= ENSG00000136144.11 TPM= 20.27 Transcript Type= protein_coding
chr13	49628299	49633872	49628299	49633872	+	ENST00000282026.1@ARL11	ENST00000282026.1	protein_coding	49628299,49630430	49628615,49633872	Gene ID= ENSG00000152213.3 TPM= 1.93 Transcript Type= protein_coding
chr13	49660726	49691475	49660726	49691475	-	ENST00000242827.10@EBPL	ENST00000242827.10	protein_coding	49691254,49669777,49663057,49660726	49691475,49669846,49663195,49661208	Gene ID= ENSG00000123179.13 TPM= 5.79 Transcript Type= protein_coding
chr13	49914261	49936308	49914261	49936308	-	transcript887.chr13.nnic@SPRYD7	transcript887.chr13.nnic	protein_coding	49936130,49931018,49927919,49921478,49918093,49914261	49936308,49931134,49928085,49921580,49918221,49915160	Gene ID= ENSG00000123178.14 TPM= 1.93 Transcript Type= NA
chr13	49912706	49936490	49912706	49936490	-	ENST00000378195.6@SPRYD7	ENST00000378195.6	protein_coding	49936130,49927919,49921478,49912706	49936490,49928085,49921580,49915160	Gene ID= ENSG00000123178.14 TPM= 4.83 Transcript Type= protein_coding
chr13	49935479	49936484	49935479	49936484	-	transcript908.chr13.nnic@SPRYD7	transcript908.chr13.nnic	protein_coding	49936130,49935479	49936484,49935992	Gene ID= ENSG00000123178.14 TPM= 1.93 Transcript Type= NA
chr13	49997019	50014331	49997019	50014331	+	ENST00000420995.6@TRIM13	ENST00000420995.6	protein_coding	49997019,49997667,50011935	49997131,49997763,50014331	Gene ID= ENSG00000204977.9 TPM= 4.83 Transcript Type= protein_coding
chr13	49997059	50013168	49997059	50013168	+	ENST00000457662.2@TRIM13	ENST00000457662.2	protein_coding	49997059,49997667,50011935	49997216,49997763,50013168	Gene ID= ENSG00000204977.9 TPM= 10.62 Transcript Type= protein_coding
chr13	50082171	50107218	50082171	50107218	+	ENST00000469754.2@DLEU1	ENST00000469754.2	processed_transcript	50082171,50083142,50104704	50082557,50083194,50107218	Gene ID= ENSG00000176124.11 TPM= 3.86 Transcript Type= lincRNA
chr13	50082171	50105297	50082171	50105297	+	ENST00000378180.8@DLEU1	ENST00000378180.8	processed_transcript	50082171,50104704	50082557,50105297	Gene ID= ENSG00000176124.11 TPM= 1.93 Transcript Type= lincRNA
chr13	50909678	50956765	50909678	50956765	+	ENST00000336617.7@RNASEH2B	ENST00000336617.7	protein_coding	50909678,50927407,50929475,50930683,50934885,50943321,50945427,50947987,50949463,50953905,50956358	50910140,50927478,50929582,50930759,50934999,50943394,50945532,50948068,50949505,50953985,50956765	Gene ID= ENSG00000136104.19 TPM= 4.83 Transcript Type= protein_coding
chr13	51365227	51452306	51365227	51452306	-	transcript932.chr13.nic@INTS6	transcript932.chr13.nic	protein_coding	51451978,51451025,51430294,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365227	51452306,51451174,51430383,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845	Gene ID= ENSG00000102786.14 TPM= 4.83 Transcript Type= NA
chr13	51365227	51453036	51365227	51453036	-	transcript933.chr13.nnic@INTS6	transcript933.chr13.nnic	protein_coding	51452415,51451978,51430294,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365227	51453036,51452055,51430383,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845	Gene ID= ENSG00000102786.14 TPM= 1.93 Transcript Type= NA
chr13	51447138	51453036	51447138	51453036	-	transcript936.chr13.nnic@INTS6	transcript936.chr13.nnic	protein_coding	51452415,51451978,51451025,51447138	51453036,51452055,51451174,51449403	Gene ID= ENSG00000102786.14 TPM= 1.93 Transcript Type= NA
chr13	51365227	51452998	51365227	51452998	-	ENST00000311234.8@INTS6	ENST00000311234.8	protein_coding	51452415,51451978,51451025,51430294,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365227	51452998,51452055,51451174,51430383,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845	Gene ID= ENSG00000102786.14 TPM= 6.76 Transcript Type= protein_coding
chr13	51453357	51453972	51453357	51453972	+	transcript945.chr13.nnic@NA	transcript945.chr13.nnic	NA	51453357	51453972	Gene ID= novel_gene_chr13_946 TPM= 1.93 Transcript Type= NA
chr13	51767993	51804183	51767993	51804183	-	transcript948.chr13.nic@DHRS12	transcript948.chr13.nic	protein_coding	51804054,51799534,51797826,51791165,51790011,51777060,51776457,51773930,51771821,51769156,51767993	51804183,51799667,51797908,51791257,51790092,51777121,51776525,51774034,51771911,51769293,51768296	Gene ID= ENSG00000102796.10 TPM= 1.93 Transcript Type= NA
chr13	51767995	51804183	51767995	51804183	-	transcript953.chr13.nic@DHRS12	transcript953.chr13.nic	protein_coding	51804054,51799534,51797826,51791165,51790011,51777060,51773930,51771821,51767995	51804183,51799667,51797908,51791257,51790092,51777121,51774034,51771911,51769293	Gene ID= ENSG00000102796.10 TPM= 1.93 Transcript Type= NA
chr13	51767993	51804123	51767993	51804123	-	ENST00000444610.6@DHRS12	ENST00000444610.6	protein_coding	51804054,51799534,51797826,51791165,51790011,51777060,51773930,51771821,51769156,51767993	51804123,51799667,51797908,51791257,51790092,51777121,51774034,51771911,51769293,51768296	Gene ID= ENSG00000102796.10 TPM= 6.76 Transcript Type= protein_coding
chr13	51803838	51805630	51803838	51805630	+	ENST00000618844.1@AL162377.1	ENST00000618844.1	antisense_RNA	51803838	51805630	Gene ID= ENSG00000231856.2 TPM= 3.86 Transcript Type= antisense_RNA
chr13	52012412	52029664	52012412	52029664	+	transcript972.chr13.nnic@ALG11	transcript972.chr13.nnic	protein_coding	52012412,52018913,52024006,52028319	52012574,52019143,52024937,52029664	Gene ID= ENSG00000253710.2 TPM= 1.93 Transcript Type= NA
chr13	52012395	52019021	52012395	52019021	+	transcript978.chr13.nic@ALG11	transcript978.chr13.nic	protein_coding	52012395,52018913	52012462,52019021	Gene ID= ENSG00000253710.2 TPM= 1.93 Transcript Type= NA
chr13	52012398	52029657	52012398	52029657	+	ENST00000523764.1@ALG11	ENST00000523764.1	protein_coding	52012398,52028319	52012462,52029657	Gene ID= ENSG00000253710.2 TPM= 1.93 Transcript Type= protein_coding
chr13	52012414	52029664	52012414	52029664	+	ENST00000521508.1@ALG11	ENST00000521508.1	protein_coding	52012414,52018913,52024006,52028319	52012462,52019143,52024937,52029664	Gene ID= ENSG00000253710.2 TPM= 6.76 Transcript Type= protein_coding
chr13	52132644	52159535	52132644	52159535	-	ENST00000618534.4@NEK3	ENST00000618534.4	protein_coding	52159198,52156075,52154080,52153895,52152609,52151325,52151146,52148415,52144691,52143915,52141020,52136800,52136116,52135729,52133689,52132644	52159535,52156248,52154173,52153992,52152692,52151392,52151232,52148469,52144891,52143987,52141069,52136902,52136259,52135863,52133815,52133226	Gene ID= ENSG00000136098.16 TPM= 1.93 Transcript Type= protein_coding
chr13	52167709	52194430	52167709	52194430	-	transcript989.chr13.nnic@MRPS31P5	transcript989.chr13.nnic	transcribed_unprocessed_pseudogene	52194158,52189639,52186683,52183976,52180582,52175639,52171158,52169987,52167709	52194430,52189914,52186823,52184114,52180654,52175776,52171248,52170056,52169304	Gene ID= ENSG00000243406.6 TPM= 1.93 Transcript Type= NA
chr13	52167709	52194446	52167709	52194446	-	transcript990.chr13.nnic@MRPS31P5	transcript990.chr13.nnic	transcribed_unprocessed_pseudogene	52194254,52189639,52186683,52183976,52180582,52175639,52171158,52169987,52167709	52194446,52189914,52186823,52184114,52180654,52175776,52171248,52170056,52169304	Gene ID= ENSG00000243406.6 TPM= 1.93 Transcript Type= NA
chr13	52167709	52194452	52167709	52194452	-	transcript991.chr13.nic@MRPS31P5	transcript991.chr13.nic	transcribed_unprocessed_pseudogene	52194254,52186683,52183976,52180582,52175639,52171158,52169987,52167709	52194452,52186823,52184114,52180654,52175776,52171248,52170056,52169304	Gene ID= ENSG00000243406.6 TPM= 1.93 Transcript Type= NA
chr13	52377167	52406494	52377167	52406494	-	ENST00000349258.8@THSD1	ENST00000349258.8	protein_coding	52406031,52402543,52397232,52377167	52406494,52402681,52398194,52378789	Gene ID= ENSG00000136114.15 TPM= 1.93 Transcript Type= protein_coding
chr13	52377187	52406128	52377187	52406128	-	ENST00000258613.4@THSD1	ENST00000258613.4	protein_coding	52406031,52402543,52397232,52386028,52377187	52406128,52402681,52398194,52386186,52378789	Gene ID= ENSG00000136114.15 TPM= 1.93 Transcript Type= protein_coding
chr13	52412602	52450244	52412602	52450244	-	ENST00000611132.4@VPS36	ENST00000611132.4	protein_coding	52449931,52442377,52439098,52436290,52434793,52433662,52427187,52426989,52425932,52423574,52417992,52417057,52416017,52412602	52450244,52442445,52439168,52436404,52434882,52433748,52427219,52427066,52426066,52423639,52418056,52417141,52416093,52415923	Gene ID= ENSG00000136100.12 TPM= 3.38 Transcript Type= protein_coding
chr13	52412602	52450656	52412602	52450656	-	transcript1006.chr13.nnic@VPS36	transcript1006.chr13.nnic	protein_coding	52450499,52442377,52439098,52436290,52434793,52433662,52427187,52426989,52425932,52417992,52417057,52416017,52412602	52450656,52442445,52439168,52436404,52434882,52433748,52427219,52427066,52426066,52418056,52417141,52416093,52415923	Gene ID= ENSG00000136100.12 TPM= 3.86 Transcript Type= NA
chr13	52412602	52450622	52412602	52450622	-	ENST00000378060.8@VPS36	ENST00000378060.8	protein_coding	52450499,52442377,52439098,52436290,52434793,52433662,52427187,52426989,52425932,52423574,52417992,52417057,52416017,52412602	52450622,52442445,52439168,52436404,52434882,52433748,52427219,52427066,52426066,52423639,52418056,52417141,52416093,52415923	Gene ID= ENSG00000136100.12 TPM= 12.07 Transcript Type= protein_coding
chr13	52450168	52451213	52450168	52451213	+	transcript1013.chr13.nnic@NA	transcript1013.chr13.nnic	NA	52450168	52451213	Gene ID= novel_gene_chr13_1014 TPM= 2.9 Transcript Type= NA
chr13	52617485	52643796	52617485	52643796	+	transcript1019.chr13.nic@AL137058.2	transcript1019.chr13.nic	processed_transcript	52617485,52621989,52627438,52632422,52637305,52642406	52617682,52622264,52627578,52632494,52637446,52643796	Gene ID= ENSG00000273784.4 TPM= 297.32 Transcript Type= NA
chr13	52651389	52652300	52651389	52652300	-	transcript1022.chr13.nnic@NA	transcript1022.chr13.nnic	NA	52651389	52652300	Gene ID= novel_gene_chr13_1023 TPM= 2.9 Transcript Type= NA
chr13	52652872	52680048	52652872	52680048	+	transcript1029.chr13.nic@SUGT1	transcript1029.chr13.nic	protein_coding	52652872,52653046,52657532,52658399,52659179,52661475,52662649,52663096,52664035,52665637,52666812,52676230,52679974	52652958,52653103,52657622,52658468,52659249,52661570,52662702,52663112,52664057,52665733,52666919,52676320,52680048	Gene ID= ENSG00000165416.14 TPM= 2.9 Transcript Type= NA
chr13	52652901	52680048	52652901	52680048	+	transcript1034.chr13.nic@SUGT1	transcript1034.chr13.nic	protein_coding	52652901,52653046,52657532,52658399,52659179,52662649,52663096,52664035,52665637,52666812,52676230,52679974	52652958,52653103,52657622,52658468,52659249,52662702,52663112,52664057,52665733,52666919,52676320,52680048	Gene ID= ENSG00000165416.14 TPM= 1.93 Transcript Type= NA
chr13	52652839	52687872	52652839	52687872	+	ENST00000343788.10@SUGT1	ENST00000343788.10	protein_coding	52652839,52653046,52657532,52658399,52659179,52661475,52662649,52663096,52664035,52665637,52666812,52676230,52679974,52687734	52652958,52653103,52657622,52658468,52659249,52661570,52662702,52663112,52664057,52665733,52666919,52676320,52680155,52687872	Gene ID= ENSG00000165416.14 TPM= 2.9 Transcript Type= protein_coding
chr13	52694904	52700748	52694904	52700748	+	transcript1036.chr13.nnic@NA	transcript1036.chr13.nnic	NA	52694904	52700748	Gene ID= novel_gene_chr13_1037 TPM= 17.38 Transcript Type= NA
chr13	60396457	60573878	60396457	60573878	+	ENST00000196169.7@TDRD3	ENST00000196169.7	protein_coding	60396457,60439688,60444687,60460380,60467238,60483775,60485799,60494435,60509763,60510630,60528367,60535108,60567525,60573613	60397010,60439772,60444748,60460540,60467379,60483846,60485948,60494575,60509919,60510755,60529217,60535233,60567650,60573878	Gene ID= ENSG00000083544.13 TPM= 2.9 Transcript Type= protein_coding
chr13	60397579	60400575	60397579	60400575	+	transcript1050.chr13.nnic@NA	transcript1050.chr13.nnic	NA	60397579	60400575	Gene ID= novel_gene_chr13_1051 TPM= 1.93 Transcript Type= NA
chr13	60510804	60513096	60510804	60513096	-	transcript1052.chr13.nnic@NA	transcript1052.chr13.nnic	NA	60510804	60513096	Gene ID= novel_gene_chr13_1053 TPM= 1.93 Transcript Type= NA
chr13	72708357	72727687	72708357	72727687	-	ENST00000377818.3@MZT1	ENST00000377818.3	protein_coding	72727524,72718952,72708357	72727687,72719097,72710345	Gene ID= ENSG00000204899.5 TPM= 26.06 Transcript Type= protein_coding
chr13	72727886	72756198	72727886	72756198	+	transcript1059.chr13.nnic@BORA	transcript1059.chr13.nnic	protein_coding	72727886,72728926,72737962,72743537,72744505,72744981,72745944,72746501,72753690,72755151	72728007,72729093,72738043,72743602,72744561,72745207,72746076,72747111,72753821,72756198	Gene ID= ENSG00000136122.15 TPM= 2.9 Transcript Type= NA
chr13	72752169	72781933	72752169	72781933	-	ENST00000377767.8@DIS3	ENST00000377767.8	protein_coding	72781605,72780846,72778187,72777420,72775925,72775211,72773946,72773684,72772693,72772159,72771795,72771081,72770904,72768785,72765972,72763451,72761923,72761646,72761363,72760529,72752169	72781933,72781003,72778380,72777493,72776092,72775375,72774059,72773821,72772839,72772275,72771896,72771145,72770988,72768912,72766058,72763607,72762137,72761814,72761521,72760651,72759878	Gene ID= ENSG00000083520.14 TPM= 1.93 Transcript Type= protein_coding
chr13	72782165	73016461	72782165	73016461	+	transcript1077.chr13.nnic@PIBF1	transcript1077.chr13.nnic	protein_coding	72782165,72783423,72792447,72795359,72797907,72821849,72827010,72827733,72835243,72854057,72893784,72908531,72917076,72931165,72998822,73015869	72782349,72783721,72792547,72795557,72798026,72821982,72827118,72827914,72835368,72854155,72893949,72908681,72917166,72931267,72998995,73016461	Gene ID= ENSG00000083535.15 TPM= 2.9 Transcript Type= NA
chr13	73058792	73077542	73058792	73077542	+	ENST00000377687.5@KLF5	ENST00000377687.5	protein_coding	73058792,73061861,73063824,73075708	73059588,73062734,73063883,73077542	Gene ID= ENSG00000102554.13 TPM= 22.2 Transcript Type= protein_coding
chr13	75310035	75482638	75310035	75482638	-	transcript1094.chr13.nic@TBC1D4	transcript1094.chr13.nic	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75324237,75320014,75312738,75310035	75482638,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75324401,75320037,75312898,75310151	Gene ID= ENSG00000136111.12 TPM= 10.75 Transcript Type= NA
chr13	75309961	75482638	75309961	75482638	-	transcript1096.chr13.nic@TBC1D4	transcript1096.chr13.nic	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75324237,75312738,75309961	75482638,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75324401,75312898,75310151	Gene ID= ENSG00000136111.12 TPM= 10.75 Transcript Type= NA
chr13	75322288	75482638	75322288	75482638	-	transcript1108.chr13.nic@TBC1D4	transcript1108.chr13.nic	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75322288	75482638,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75324401	Gene ID= ENSG00000136111.12 TPM= 7.86 Transcript Type= NA
chr13	75284665	75482114	75284665	75482114	-	ENST00000431480.6@TBC1D4	ENST00000431480.6	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75324237,75312738,75309942,75306313,75302243,75299330,75294854,75292102,75288934,75284665	75482114,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75324401,75312898,75310151,75306471,75302401,75299574,75295013,75292271,75289110,75287025	Gene ID= ENSG00000136111.12 TPM= 43.57 Transcript Type= protein_coding
chr13	75284672	75482114	75284672	75482114	-	ENST00000377636.7@TBC1D4	ENST00000377636.7	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75324237,75320014,75312738,75309942,75306313,75302243,75299330,75294854,75292102,75288934,75284672	75482114,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75324401,75320037,75312898,75310151,75306471,75302401,75299574,75295013,75292271,75289110,75287025	Gene ID= ENSG00000136111.12 TPM= 19.44 Transcript Type= protein_coding
chr13	75480886	75483151	75480886	75483151	+	transcript1115.chr13.nnic@NA	transcript1115.chr13.nnic	NA	75480886,75482453	75481344,75483151	Gene ID= novel_gene_chr13_1116 TPM= 1.93 Transcript Type= NA
chr13	75480976	75513650	75480976	75513650	+	transcript1117.chr13.nnic@NA	transcript1117.chr13.nnic	NA	75480976,75512302	75481344,75513650	Gene ID= novel_gene_chr13_1118 TPM= 1.93 Transcript Type= NA
chr13	75525219	75538802	75525219	75538802	-	ENST00000377615.7@COMMD6	ENST00000377615.7	protein_coding	75538753,75537764,75537664,75530114,75525219	75538802,75537920,75537675,75530266,75526639	Gene ID= ENSG00000188243.12 TPM= 59.85 Transcript Type= protein_coding
chr13	75526436	75537850	75526436	75537850	-	transcript1121.chr13.nnic@COMMD6	transcript1121.chr13.nnic	protein_coding	75537760,75530114,75526436	75537850,75530266,75526639	Gene ID= ENSG00000188243.12 TPM= 5.79 Transcript Type= NA
chr13	75549730	75605933	75549730	75605933	+	transcript1132.chr13.nnic@UCHL3	transcript1132.chr13.nnic	protein_coding	75549730,75549976,75560753,75566695,75567227,75568558,75569460,75594915,75604769,75605729	75549862,75549987,75560881,75566851,75567312,75568574,75569507,75594990,75604827,75605933	Gene ID= ENSG00000118939.17 TPM= 2.9 Transcript Type= NA
chr13	75549791	75605933	75549791	75605933	+	ENST00000377595.7@UCHL3	ENST00000377595.7	protein_coding	75549791,75549976,75560753,75566695,75567227,75569460,75594915,75604769,75605729	75549862,75549987,75560881,75566851,75567312,75569507,75594990,75604827,75605933	Gene ID= ENSG00000118939.17 TPM= 73.36 Transcript Type= protein_coding
chr13	75823108	75858675	75823108	75858675	+	transcript1125.chr13.nnic@LMO7	transcript1125.chr13.nnic	protein_coding	75823108,75823565,75833051,75834226,75835152,75836397,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75823139,75823873,75833165,75834387,75835339,75836457,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 10.62 Transcript Type= NA
chr13	75760696	75819442	75760696	75819442	+	transcript1129.chr13.nnic@LMO7	transcript1129.chr13.nnic	protein_coding	75760696,75760932,75795401,75796636,75800684,75804289,75805479,75806058,75807480,75809154,75817161,75819393	75760831,75761038,75795431,75796749,75800882,75804541,75805760,75806261,75808199,75809183,75817278,75819442	Gene ID= ENSG00000136153.19 TPM= 6.76 Transcript Type= NA
chr13	76880166	76886390	76880166	76886390	-	ENST00000377474.3@KCTD12	ENST00000377474.3	protein_coding	76880166	76886390	Gene ID= ENSG00000178695.5 TPM= 8.69 Transcript Type= protein_coding
chr13	76992044	77002477	76992044	77002477	+	ENST00000636780.1@CLN5	ENST00000636780.1	protein_coding	76992044,76995063,76995902,76998043,77000458	76992271,76995228,76996127,76998085,77002477	Gene ID= ENSG00000102805.14 TPM= 1.93 Transcript Type= protein_coding
chr13	76990660	77005117	76990660	77005117	+	ENST00000636183.1@CLN5	ENST00000636183.1	protein_coding	76990660,76995063,76995902,77000458	76992271,76995228,76996127,77005117	Gene ID= ENSG00000102805.14 TPM= 4.83 Transcript Type= protein_coding
chr13	76992084	77002506	76992084	77002506	+	ENST00000377453.8@CLN5	ENST00000377453.8	protein_coding	76992084,76995063,76995902,77000458	76992271,76995228,76996127,77002506	Gene ID= ENSG00000102805.14 TPM= 5.79 Transcript Type= protein_coding
chr13	77000747	77027211	77000747	77027211	-	transcript1148.chr13.nic@FBXL3	transcript1148.chr13.nic	protein_coding	77026827,77021513,77018600,77015409,77000747	77027211,77021861,77018722,77015580,77002049	Gene ID= ENSG00000005812.10 TPM= 1.93 Transcript Type= NA
chr13	77005254	77027210	77005254	77027210	-	transcript1158.chr13.nnic@FBXL3	transcript1158.chr13.nnic	protein_coding	77026827,77018600,77015409,77005254	77027210,77018722,77015580,77007788	Gene ID= ENSG00000005812.10 TPM= 14 Transcript Type= NA
chr13	77005254	77027150	77005254	77027150	-	ENST00000355619.9@FBXL3	ENST00000355619.9	protein_coding	77026827,77021513,77018600,77015409,77005254	77027150,77021861,77018722,77015580,77007788	Gene ID= ENSG00000005812.10 TPM= 52.13 Transcript Type= protein_coding
chr13	77270031	77327082	77270031	77327082	-	transcript1163.chr13.nic@MYCBP2	transcript1163.chr13.nic	protein_coding	77326474,77296599,77288161,77278758,77273472,77270296,77270031	77327082,77296674,77288376,77278911,77273668,77270538,77270063	Gene ID= ENSG00000005810.17 TPM= 2.9 Transcript Type= NA
chr13	78614291	78659179	78614291	78659179	-	ENST00000282003.6@RNF219	ENST00000282003.6	protein_coding	78659049,78644862,78642122,78638823,78635110,78614291	78659179,78644997,78642213,78639071,78635198,78617122	Gene ID= ENSG00000152193.7 TPM= 16.41 Transcript Type= protein_coding
chr13	79481152	79556075	79481152	79556075	+	ENST00000218652.11@NDFIP2	ENST00000218652.11	protein_coding	79481152,79520810,79533323,79539682,79543558,79548328,79551017,79552516	79481524,79520975,79533456,79539775,79543682,79548394,79551122,79556075	Gene ID= ENSG00000102471.13 TPM= 7.24 Transcript Type= protein_coding
chr13	79481474	79554096	79481474	79554096	+	ENST00000620924.1@NDFIP2	ENST00000620924.1	protein_coding	79481474,79520810,79533323,79539682,79543558,79548328,79551017,79552516	79481524,79520975,79533456,79539775,79543682,79548394,79551122,79554096	Gene ID= ENSG00000102471.13 TPM= 3.38 Transcript Type= protein_coding
chr13	94548743	94549410	94548743	94549410	-	transcript1191.chr13.nnic@NA	transcript1191.chr13.nnic	NA	94548743	94549410	Gene ID= novel_gene_chr13_1192 TPM= 1.93 Transcript Type= NA
chr13	94574051	94596257	94574051	94596257	-	ENST00000261296.6@TGDS	ENST00000261296.6	protein_coding	94596051,94593841,94592241,94590853,94583094,94581091,94579894,94578730,94578005,94577371,94576314,94574051	94596257,94593907,94592309,94590943,94583236,94581189,94579953,94578773,94578170,94577429,94576411,94574852	Gene ID= ENSG00000088451.10 TPM= 2.9 Transcript Type= protein_coding
chr13	94601869	94629283	94601869	94629283	+	transcript1203.chr13.nnic@GPR180	transcript1203.chr13.nnic	protein_coding	94601869,94605391,94612190,94619468,94621078,94623109,94625966,94627013	94602072,94605549,94612390,94619517,94621235,94623300,94626043,94629283	Gene ID= ENSG00000152749.7 TPM= 1.93 Transcript Type= NA
chr13	95019829	95301429	95019829	95301429	-	ENST00000376887.8@ABCC4	ENST00000376887.8	protein_coding	95301241,95247643,95246975,95234610,95210692,95209434,95207800,95206532,95194836,95188453,95186701,95177997,95177707,95170532,95166158,95164378,95163610,95163122,95161189,95115922,95083140,95075432,95074214,95073204,95071662,95062704,95053095,95044266,95043682,95034605,95019829	95301429,95247753,95247095,95234834,95210781,95209597,95207925,95206781,95194937,95188542,95186892,95178091,95177793,95170628,95166367,95164518,95163647,95163216,95161335,95116001,95083290,95075551,95074324,95073304,95071853,95062859,95053184,95044438,95043787,95034739,95021682	Gene ID= ENSG00000125257.13 TPM= 2.9 Transcript Type= protein_coding
chr13	95677120	95787082	95677120	95787082	+	transcript1220.chr13.nic@DNAJC3	transcript1220.chr13.nic	protein_coding	95677120,95709227,95723242,95725178,95757644,95760040,95760679,95763643,95763833,95785939,95787007	95677337,95709337,95723366,95725252,95757796,95760221,95760798,95763748,95763953,95786071,95787082	Gene ID= ENSG00000102580.14 TPM= 2.9 Transcript Type= NA
chr13	95677120	95745765	95677120	95745765	+	transcript1225.chr13.nnic@DNAJC3	transcript1225.chr13.nnic	protein_coding	95677120,95709227,95723242,95725178,95742634	95677337,95709337,95723366,95725252,95745765	Gene ID= ENSG00000102580.14 TPM= 3.86 Transcript Type= NA
chr13	95677139	95794989	95677139	95794989	+	ENST00000602402.5@DNAJC3	ENST00000602402.5	protein_coding	95677139,95709227,95723242,95725178,95757644,95760040,95760679,95763643,95763833,95785939,95787007,95790873	95677337,95709337,95723366,95725252,95757796,95760221,95760798,95763748,95763953,95786071,95787155,95794989	Gene ID= ENSG00000102580.14 TPM= 24.13 Transcript Type= protein_coding
chr13	96021552	96053411	96021552	96053411	-	transcript1232.chr13.nic@UGGT2	transcript1232.chr13.nic	protein_coding	96053155,96031889,96023629,96021552	96053411,96031971,96023759,96023152	Gene ID= ENSG00000102595.19 TPM= 1.93 Transcript Type= NA
chr13	97222332	97394120	97222332	97394120	+	transcript1233.chr13.nic@MBNL2	transcript1233.chr13.nic	protein_coding	97222332,97275632,97334276,97343016,97346804,97356796,97357482,97391322	97222531,97276409,97334440,97343216,97347067,97356849,97357635,97394120	Gene ID= ENSG00000139793.18 TPM= 4.34 Transcript Type= NA
chr13	97222332	97394120	97222332	97394120	+	transcript1234.chr13.nic@MBNL2	transcript1234.chr13.nic	protein_coding	97222332,97275632,97334276,97343016,97346804,97357482,97366459,97391322	97222531,97276409,97334440,97343216,97347067,97357635,97366553,97394120	Gene ID= ENSG00000139793.18 TPM= 14.48 Transcript Type= NA
chr13	97222334	97277910	97222334	97277910	+	transcript1239.chr13.nic@MBNL2	transcript1239.chr13.nic	protein_coding	97222334,97275632	97222531,97277910	Gene ID= ENSG00000139793.18 TPM= 2.9 Transcript Type= NA
chr13	97222296	97394119	97222296	97394119	+	ENST00000343600.8@MBNL2	ENST00000343600.8	protein_coding	97222296,97275632,97334276,97343016,97346804,97357482,97391322	97222531,97276409,97334440,97343216,97347067,97357635,97394119	Gene ID= ENSG00000139793.18 TPM= 34.27 Transcript Type= protein_coding
chr13	97976632	98021882	97976632	98021882	+	ENST00000490680.5@IPO5	ENST00000490680.5	protein_coding	97976632,97982503,97985421,97989062,97990126,97990433,97992892,97993105,97997531,98000539,98002467,98002684,98002864,98006130,98008059,98009881,98010103,98012246,98014042,98015530,98015726,98016729,98018485,98019581,98020992,98021736	97976786,97982583,97985613,97989164,97990222,97990537,97993014,97993225,97997618,98000645,98002591,98002773,98003037,98006348,98008142,98010013,98010224,98012342,98014214,98015641,98015781,98016851,98018704,98019809,98021133,98021882	Gene ID= ENSG00000065150.18 TPM= 31.37 Transcript Type= protein_coding
chr13	99200850	99386427	99200850	99386427	+	transcript1274.chr13.nic@UBAC2	transcript1274.chr13.nic	protein_coding	99200850,99231434,99238427,99243832,99244515,99314097,99318022,99340320,99367787,99385228	99200939,99231513,99238554,99243951,99244624,99314220,99318069,99340565,99367906,99386427	Gene ID= ENSG00000134882.15 TPM= 12.06 Transcript Type= NA
chr13	99200847	99386425	99200847	99386425	+	transcript1287.chr13.nnic@UBAC2	transcript1287.chr13.nnic	protein_coding	99200847,99238427,99243832,99244515,99314097,99318022,99340320,99385228	99200939,99238554,99243951,99244624,99314220,99318069,99340565,99386425	Gene ID= ENSG00000134882.15 TPM= 10.27 Transcript Type= NA
chr13	99312783	99386434	99312783	99386434	+	ENST00000460562.5@UBAC2	ENST00000460562.5	protein_coding	99312783,99314097,99318022,99340320,99367787,99385228	99313387,99314220,99318069,99340565,99367906,99386434	Gene ID= ENSG00000134882.15 TPM= 3.26 Transcript Type= processed_transcript
chr13	99501417	99564006	99501417	99564006	+	ENST00000376387.4@TM9SF2	ENST00000376387.4	protein_coding	99501417,99517614,99520036,99529467,99536608,99537739,99539446,99540714,99541559,99543863,99546985,99549165,99552167,99554304,99555536,99559363,99562691	99501777,99517681,99520129,99529594,99536737,99537863,99539557,99540793,99541667,99543995,99547104,99549222,99552326,99554455,99555647,99559534,99564006	Gene ID= ENSG00000125304.8 TPM= 5.79 Transcript Type= protein_coding
chr13	99606664	99892564	99606664	99892564	+	transcript1317.chr13.nic@CLYBL	transcript1317.chr13.nic	protein_coding	99606664,99772824,99858861,99864818,99866240,99870938,99891318,99892443	99606757,99773010,99859049,99864911,99866407,99871062,99891437,99892564	Gene ID= ENSG00000125246.15 TPM= 5.31 Transcript Type= NA
chr13	99606664	99865238	99606664	99865238	+	transcript1320.chr13.nic@CLYBL	transcript1320.chr13.nic	protein_coding	99606664,99772824,99858861,99864818	99606757,99773010,99859049,99865238	Gene ID= ENSG00000125246.15 TPM= 3.38 Transcript Type= NA
chr13	100089078	100491815	100089078	100491815	+	transcript1330.chr13.nnic@PCCA	transcript1330.chr13.nnic	protein_coding	100089078,100102883,100111841,100111993,100154979,100157287,100209332,100235842,100257595,100262729,100268689,100273196,100301460,100302924,100307192,100309833,100330561,100340157,100368472,100425633,100449252,100489937,100491650	100089225,100102960,100111888,100112061,100155092,100157340,100209463,100235878,100257673,100262831,100268783,100273346,100301603,100302998,100307260,100309908,100330671,100340259,100368574,100425731,100449305,100489986,100491815	Gene ID= ENSG00000175198.15 TPM= 4.83 Transcript Type= NA
chr13	100089083	100530435	100089083	100530435	+	ENST00000376285.5@PCCA	ENST00000376285.5	protein_coding	100089083,100102883,100111841,100111993,100154979,100157287,100209332,100235842,100257595,100262729,100268689,100273196,100301460,100302924,100307192,100309833,100330561,100340157,100368472,100425633,100449252,100515427,100527675,100530098	100089225,100102960,100111888,100112061,100155092,100157340,100209463,100235878,100257673,100262831,100268783,100273346,100301603,100302998,100307260,100309908,100330671,100340259,100368574,100425731,100449305,100515567,100527752,100530435	Gene ID= ENSG00000175198.15 TPM= 6.76 Transcript Type= protein_coding
chr13	100539901	100540248	100539901	100540248	-	ENST00000427219.1@RPS26P47	ENST00000427219.1	processed_pseudogene	100539901	100540248	Gene ID= ENSG00000234354.3 TPM= 1.93 Transcript Type= processed_pseudogene
chr13	100603927	100674879	100603927	100674879	-	ENST00000376234.7@TMTC4	ENST00000376234.7	protein_coding	100674744,100668579,100664221,100662964,100656381,100642211,100637930,100637538,100636532,100635024,100634805,100626071,100625785,100625535,100614316,100612398,100606358,100603927	100674879,100668794,100664336,100663180,100656468,100642311,100638022,100637702,100636734,100635195,100634936,100626150,100625892,100625676,100614430,100612510,100606427,100605142	Gene ID= ENSG00000125247.15 TPM= 4.83 Transcript Type= protein_coding
chr13	100603934	100674939	100603934	100674939	-	transcript1342.chr13.nnic@TMTC4	transcript1342.chr13.nnic	protein_coding	100674744,100670283,100668579,100664221,100662964,100656381,100637930,100637538,100636532,100635024,100634805,100626071,100625785,100625535,100614316,100612398,100606358,100603934	100674939,100670569,100668794,100664336,100663180,100656468,100638022,100637702,100636734,100635195,100634936,100626150,100625892,100625676,100614430,100612510,100606427,100605142	Gene ID= ENSG00000125247.15 TPM= 1.93 Transcript Type= NA
chr13	100603934	100674939	100603934	100674939	-	transcript1343.chr13.nnic@TMTC4	transcript1343.chr13.nnic	protein_coding	100674744,100670360,100668579,100664221,100662964,100656381,100642211,100637538,100636532,100635024,100634805,100626071,100625785,100625535,100614316,100612398,100606358,100603934	100674939,100670569,100668794,100664336,100663180,100656468,100642311,100637702,100636734,100635195,100634936,100626150,100625892,100625676,100614430,100612510,100606427,100605142	Gene ID= ENSG00000125247.15 TPM= 2.9 Transcript Type= NA
chr13	100603934	100674795	100603934	100674795	-	ENST00000342624.9@TMTC4	ENST00000342624.9	protein_coding	100674744,100670360,100668579,100664221,100662964,100656381,100642211,100637930,100637538,100636532,100635024,100634805,100626071,100625785,100625535,100614316,100612398,100606358,100603934	100674795,100670569,100668794,100664336,100663180,100656468,100642311,100638022,100637702,100636734,100635195,100634936,100626150,100625892,100625676,100614430,100612510,100606427,100605142	Gene ID= ENSG00000125247.15 TPM= 3.86 Transcript Type= protein_coding
chr13	102394630	102395703	102394630	102395703	+	ENST00000606448.1@FGF14-AS2	ENST00000606448.1	lincRNA	102394630	102395703	Gene ID= ENSG00000272143.1 TPM= 10.62 Transcript Type= lincRNA
chr13	102597000	102657130	102597000	102657130	+	transcript1363.chr13.nic@TPP2	transcript1363.chr13.nic	protein_coding	102597000,102604793,102614101,102616396,102618722,102622877,102627012,102627848,102629482,102630096,102633950,102635587,102636224,102637082,102638239,102640270,102643222,102644557,102644909,102646294,102647207,102648907,102649408,102651359,102657056	102597203,102604921,102614196,102616500,102618846,102623040,102627166,102627924,102629609,102630195,102634098,102635702,102636392,102637239,102638315,102640376,102643376,102644673,102645009,102646390,102647344,102649151,102649486,102651397,102657130	Gene ID= ENSG00000134900.11 TPM= 4.83 Transcript Type= NA
chr13	102597003	102678461	102597003	102678461	+	ENST00000376065.8@TPP2	ENST00000376065.8	protein_coding	102597003,102604793,102614101,102616396,102618722,102622877,102627012,102627848,102629482,102630096,102633950,102635587,102636224,102637082,102638239,102640270,102643222,102644557,102644909,102646294,102647207,102648907,102649408,102657056,102663648,102664795,102674283,102676296,102678227	102597203,102604921,102614196,102616500,102618846,102623040,102627166,102627924,102629609,102630195,102634098,102635702,102636392,102637239,102638315,102640376,102643376,102644673,102645009,102646390,102647344,102649151,102649486,102657207,102663744,102664925,102674490,102676415,102678461	Gene ID= ENSG00000134900.11 TPM= 19.31 Transcript Type= protein_coding
chr13	102766110	102773811	102766110	102773811	-	ENST00000376032.8@TEX30	ENST00000376032.8	protein_coding	102773682,102770012,102769311,102768260,102767273,102766110	102773811,102770086,102769541,102768311,102767478,102766580	Gene ID= ENSG00000151287.16 TPM= 4.18 Transcript Type= protein_coding
chr13	102766110	102773811	102766110	102773811	-	ENST00000376029.3@TEX30	ENST00000376029.3	protein_coding	102773682,102770012,102769311,102768260,102766110	102773811,102770086,102769541,102768311,102766580	Gene ID= ENSG00000151287.16 TPM= 1.28 Transcript Type= protein_coding
chr13	102766110	102773759	102766110	102773759	-	ENST00000376021.8@TEX30	ENST00000376021.8	protein_coding	102773682,102769311,102768260,102767273,102766110	102773759,102769541,102768311,102767478,102766580	Gene ID= ENSG00000151287.16 TPM= 1.28 Transcript Type= protein_coding
chr13	102772145	102773782	102772145	102773782	-	transcript1373.chr13.nnic@NA	transcript1373.chr13.nnic	NA	102772145	102773782	Gene ID= novel_gene_chr13_1374 TPM= 4.83 Transcript Type= NA
chr13	102799049	102841533	102799049	102841533	+	ENST00000257336.5@BIVM	ENST00000257336.5	protein_coding	102799049,102805307,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839572	102799521,102805390,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102841533	Gene ID= ENSG00000134897.13 TPM= 2.41 Transcript Type= protein_coding
chr13	102800343	102841533	102800343	102841533	+	transcript1381.chr13.nic@BIVM	transcript1381.chr13.nic	protein_coding	102800343,102805307,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839572	102800735,102805390,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102841533	Gene ID= ENSG00000134897.13 TPM= 3.7 Transcript Type= NA
chr13	102800370	102840534	102800370	102840534	+	transcript1383.chr13.nnic@BIVM-ERCC5	transcript1383.chr13.nnic	protein_coding	102800370,102805058,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839572	102800735,102805239,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102840534	Gene ID= ENSG00000270181.2 TPM= 1.93 Transcript Type= NA
chr13	102800366	102840704	102800366	102840704	+	transcript1389.chr13.nnic@BIVM-ERCC5	transcript1389.chr13.nnic	protein_coding	102800366,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839572	102800735,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102840704	Gene ID= ENSG00000270181.2 TPM= 1.93 Transcript Type= NA
chr13	102844844	102876001	102844844	102876001	+	ENST00000355739.8@ERCC5	ENST00000355739.8	protein_coding	102844844,102852118,102853757,102854288,102856052,102858275,102861507,102862030,102865667,102866262,102866632,102868113,102872198,102873259,102875307	102846354,102852293,102853872,102854374,102856112,102858418,102861714,102863103,102865911,102866381,102866845,102868257,102872398,102873343,102876001	Gene ID= ENSG00000134899.18 TPM= 26.55 Transcript Type= protein_coding
chr13	102846038	102875983	102846038	102875983	+	transcript1395.chr13.nic@ERCC5	transcript1395.chr13.nic	protein_coding	102846038,102852118,102853757,102856052,102858275,102861507,102862030,102865667,102866262,102866632,102868113,102872198,102873259,102875307	102846354,102852293,102854374,102856112,102858418,102861714,102863103,102865911,102866381,102866845,102868257,102872398,102873343,102875983	Gene ID= ENSG00000134899.18 TPM= 5.31 Transcript Type= NA
chr13	102903339	102904000	102903339	102904000	+	ENST00000613439.1@AL137246.2	ENST00000613439.1	lincRNA	102903339	102904000	Gene ID= ENSG00000278445.1 TPM= 11.58 Transcript Type= lincRNA
chr13	106543330	106568178	106543330	106568178	-	transcript1404.chr13.nic@ARGLU1	transcript1404.chr13.nic	protein_coding	106567573,106557048,106543330	106568178,106559657,106544160	Gene ID= ENSG00000134884.13 TPM= 19.31 Transcript Type= NA
chr13	106541673	106568164	106541673	106568164	-	ENST00000400198.7@ARGLU1	ENST00000400198.7	protein_coding	106567573,106559432,106557048,106541673	106568164,106559657,106557131,106544160	Gene ID= ENSG00000134884.13 TPM= 19.31 Transcript Type= protein_coding
chr13	108207439	108215534	108207439	108215534	-	ENST00000442234.5@LIG4	ENST00000442234.5	protein_coding	108215484,108214538,108207439	108215534,108214610,108211296	Gene ID= ENSG00000174405.13 TPM= 7.96 Transcript Type= protein_coding
chr13	108207439	108215548	108207439	108215548	-	transcript1412.chr13.nnic@LIG4	transcript1412.chr13.nnic	protein_coding	108215484,108214538,108207439	108215548,108214718,108211296	Gene ID= ENSG00000174405.13 TPM= 7 Transcript Type= NA
chr13	108207446	108215523	108207446	108215523	-	ENST00000614526.1@LIG4	ENST00000614526.1	protein_coding	108215484,108214538,108207446	108215523,108214610,108211216	Gene ID= ENSG00000174405.13 TPM= 1.69 Transcript Type= protein_coding
chr13	108207439	108218368	108207439	108218368	-	ENST00000405925.2@LIG4	ENST00000405925.2	protein_coding	108218162,108207439	108218368,108211296	Gene ID= ENSG00000174405.13 TPM= 2.65 Transcript Type= protein_coding
chr13	108207571	108215507	108207571	108215507	-	transcript1415.chr13.nnic@LIG4	transcript1415.chr13.nnic	protein_coding	108215484,108207571	108215507,108211296	Gene ID= ENSG00000174405.13 TPM= 2.9 Transcript Type= NA
chr13	108218379	108234255	108218379	108234255	+	ENST00000375898.3@ABHD13	ENST00000375898.3	protein_coding	108218379,108229199	108218659,108234255	Gene ID= ENSG00000139826.5 TPM= 4.83 Transcript Type= protein_coding
chr13	109141084	109207997	109141084	109207997	+	transcript1422.chr13.nic@MYO16	transcript1422.chr13.nic	protein_coding	109141084,109164901,109179542,109206609	109141376,109165059,109179633,109207997	Gene ID= ENSG00000041515.15 TPM= 1.93 Transcript Type= NA
chr13	109752698	109786568	109752698	109786568	-	ENST00000375856.4@IRS2	ENST00000375856.4	protein_coding	109782042,109752698	109786568,109756308	Gene ID= ENSG00000185950.8 TPM= 48.27 Transcript Type= protein_coding
chr13	109779654	109782627	109779654	109782627	-	transcript1439.chr13.nnic@NA	transcript1439.chr13.nnic	NA	109779654	109782627	Gene ID= novel_gene_chr13_1440 TPM= 1.93 Transcript Type= NA
chr13	110128403	110129696	110128403	110129696	-	transcript1445.chr13.nnic@NA	transcript1445.chr13.nnic	NA	110128403	110129696	Gene ID= novel_gene_chr13_1446 TPM= 1.93 Transcript Type= NA
chr13	110129195	110130241	110129195	110130241	+	transcript1441.chr13.nnic@NA	transcript1441.chr13.nnic	NA	110129195	110130241	Gene ID= novel_gene_chr13_1442 TPM= 2.9 Transcript Type= NA
chr13	110131701	110134522	110131701	110134522	+	transcript1443.chr13.nnic@NA	transcript1443.chr13.nnic	NA	110131701	110134522	Gene ID= novel_gene_chr13_1444 TPM= 1.93 Transcript Type= NA
chr13	110148963	110307149	110148963	110307149	-	ENST00000375820.8@COL4A1	ENST00000375820.8	protein_coding	110306944,110242675,110213926,110213782,110212574,110212417,110211869,110211647,110210129,110209980,110209392,110208849,110207403,110206865,110206665,110205494,110205353,110203566,110201438,110200854,110198467,110195023,110192830,110192214,110187138,110186385,110183184,110182993,110181292,110179271,110178923,110178064,110177842,110176885,110176626,110176424,110175218,110174623,110174446,110173900,110172720,110170547,110169629,110167158,110166232,110164862,110163463,110162230,110161192,110155283,110152334,110148963	110307149,110242734,110214015,110213826,110212618,110212479,110211922,110211673,110210212,110210042,110209427,110208890,110207489,110206891,110206715,110205538,110205406,110203607,110201522,110200889,110198631,110195118,110192913,110192284,110187329,110186553,110183276,110183097,110181389,110179421,110179036,110178231,110177931,110177037,110176724,110176513,110175357,110174749,110174526,110173998,110172770,110170732,110169762,110167230,110166303,110164990,110163561,110162442,110161369,110155397,110152506,110150444	Gene ID= ENSG00000187498.14 TPM= 50.2 Transcript Type= protein_coding
chr13	110307283	110484977	110307283	110484977	+	transcript1462.chr13.nic@COL4A2	transcript1462.chr13.nic	protein_coding	110307283,110307860,110308069,110357472,110424734,110424953,110428467,110429885,110430401,110430545,110432325,110434401,110436269,110438002,110438618,110439789,110445829,110446798,110449679,110450305,110457343,110458771,110462114,110462278,110465405,110466003,110467040,110469217,110472929,110478003,110480220,110482516,110484905	110307528,110307947,110308123,110357552,110424868,110424997,110428583,110429956,110430436,110430607,110432360,110434442,110436367,110438037,110438668,110439833,110445882,110446864,110449789,110450454,110457435,110458934,110462186,110462384,110465606,110466062,110467096,110469324,110473150,110478164,110480390,110482659,110484977	Gene ID= ENSG00000134871.17 TPM= 6.76 Transcript Type= NA
chr13	110307267	110513027	110307267	110513027	+	ENST00000360467.5@COL4A2	ENST00000360467.5	protein_coding	110307267,110307860,110308069,110357472,110424734,110424953,110428467,110429885,110430401,110430545,110432325,110434401,110436269,110438002,110438618,110439789,110445829,110446798,110449679,110450305,110457343,110458771,110462114,110462278,110465405,110466003,110467040,110469217,110472929,110478003,110480220,110482516,110484905,110485655,110489445,110489711,110491233,110492070,110493211,110495342,110501668,110503121,110503383,110503847,110504148,110506415,110507935,110511934	110307528,110307947,110308123,110357552,110424868,110424997,110428583,110429956,110430436,110430607,110432360,110434442,110436367,110438037,110438668,110439833,110445882,110446864,110449789,110450454,110457435,110458934,110462186,110462384,110465606,110466062,110467096,110469324,110473150,110478164,110480390,110482659,110485027,110485836,110489508,110489785,110491340,110492177,110493282,110495467,110501784,110503282,110503481,110503993,110504264,110506606,110508221,110513027	Gene ID= ENSG00000134871.17 TPM= 107.15 Transcript Type= protein_coding
chr13	110523066	110561733	110523066	110561733	-	ENST00000267328.4@RAB20	ENST00000267328.4	protein_coding	110561348,110523066	110561733,110524197	Gene ID= ENSG00000139832.4 TPM= 5.79 Transcript Type= protein_coding
chr13	110615524	110639993	110615524	110639993	+	transcript1478.chr13.nic@NAXD	transcript1478.chr13.nic	protein_coding	110615524,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638242	110615647,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 3.76 Transcript Type= NA
chr13	110615524	110639993	110615524	110639993	+	transcript1479.chr13.nic@NAXD	transcript1479.chr13.nic	protein_coding	110615524,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638378	110615647,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 59.75 Transcript Type= NA
chr13	110615570	110639993	110615570	110639993	+	transcript1482.chr13.nic@NAXD	transcript1482.chr13.nic	protein_coding	110615570,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638378	110615774,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 24.04 Transcript Type= NA
chr13	110615524	110639993	110615524	110639993	+	transcript1484.chr13.nic@NAXD	transcript1484.chr13.nic	protein_coding	110615524,110622216,110624234,110625190,110627439,110634545,110634672,110637129,110638378	110615647,110622366,110624279,110625278,110627547,110634595,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 3.63 Transcript Type= NA
chr13	110615460	110639993	110615460	110639993	+	ENST00000424185.6@NAXD	ENST00000424185.6	protein_coding	110615460,110627439,110634545,110634672,110635468,110637129,110638378	110615647,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 3.76 Transcript Type= protein_coding
chr13	110615591	110639993	110615591	110639993	+	ENST00000470164.2@NAXD	ENST00000470164.2	protein_coding	110615591,110622216,110624234,110627439,110634545,110634672,110635468,110637129,110638378	110615647,110622366,110624279,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 3.76 Transcript Type= processed_transcript
chr13	110615661	110639993	110615661	110639993	+	ENST00000309957.2@NAXD	ENST00000309957.2	protein_coding	110615661,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638242	110615774,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 8.59 Transcript Type= protein_coding
chr13	110641417	110706098	110641417	110706098	-	transcript1494.chr13.nic@CARS2	transcript1494.chr13.nic	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110647101,110645967,110644385,110644065,110642315,110641417	110706098,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110646090,110644483,110644182,110642521,110641608	Gene ID= ENSG00000134905.16 TPM= 3.21 Transcript Type= NA
chr13	110641417	110706096	110641417	110706096	-	transcript1497.chr13.nic@CARS2	transcript1497.chr13.nic	protein_coding	110705870,110705521,110701438,110697918,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110647101,110645967,110644385,110642315,110641417	110706096,110705571,110701555,110697967,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110646090,110644483,110642521,110641608	Gene ID= ENSG00000134905.16 TPM= 10.45 Transcript Type= NA
chr13	110641417	110706157	110641417	110706157	-	ENST00000257347.8@CARS2	ENST00000257347.8	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110647101,110645967,110644385,110642315,110641417	110706157,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110646090,110644483,110642521,110641608	Gene ID= ENSG00000134905.16 TPM= 61.62 Transcript Type= protein_coding
chr13	110714982	110721071	110714982	110721071	+	ENST00000375774.3@ING1	ENST00000375774.3	protein_coding	110714982,110719229	110716008,110721071	Gene ID= ENSG00000153487.12 TPM= 9.65 Transcript Type= protein_coding
chr13	110868216	110870304	110868216	110870304	-	transcript1519.chr13.nnic@LINC00346	transcript1519.chr13.nnic	lincRNA	110869745,110868216	110870304,110869630	Gene ID= ENSG00000255874.2 TPM= 2.9 Transcript Type= NA
chr13	110869213	110870304	110869213	110870304	-	transcript1521.chr13.nnic@LINC00346	transcript1521.chr13.nnic	lincRNA	110869745,110869213	110870304,110869630	Gene ID= ENSG00000255874.2 TPM= 2.9 Transcript Type= NA
chr13	110869266	110870304	110869266	110870304	-	transcript1522.chr13.nnic@LINC00346	transcript1522.chr13.nnic	lincRNA	110869745,110869266	110870304,110869630	Gene ID= ENSG00000255874.2 TPM= 2.9 Transcript Type= NA
chr13	110867252	110870304	110867252	110870304	-	transcript1523.chr13.nnic@NA	transcript1523.chr13.nnic	NA	110867252	110870304	Gene ID= novel_gene_chr13_1524 TPM= 5.79 Transcript Type= NA
chr13	110878540	110915021	110878540	110915021	-	transcript1535.chr13.nnic@ANKRD10	transcript1535.chr13.nnic	protein_coding	110914725,110910618,110906033,110893028,110883111,110878540	110915021,110910770,110906124,110893263,110883793,110880112	Gene ID= ENSG00000088448.14 TPM= 4.83 Transcript Type= NA
chr13	110878540	110915067	110878540	110915067	-	transcript1536.chr13.nic@ANKRD10	transcript1536.chr13.nic	protein_coding	110914725,110910618,110906033,110893028,110883553,110878540	110915067,110910770,110906124,110893263,110883793,110880112	Gene ID= ENSG00000088448.14 TPM= 7.72 Transcript Type= NA
chr13	110878540	110915069	110878540	110915069	-	transcript1547.chr13.nic@ANKRD10	transcript1547.chr13.nic	protein_coding	110914725,110910618,110906033,110893028,110878540	110915069,110910770,110906124,110893263,110883793	Gene ID= ENSG00000088448.14 TPM= 25.1 Transcript Type= NA
chr13	110892700	110915029	110892700	110915029	-	transcript1560.chr13.nic@ANKRD10	transcript1560.chr13.nic	protein_coding	110914725,110910618,110906033,110900530,110892700	110915029,110910770,110906124,110900694,110893263	Gene ID= ENSG00000088448.14 TPM= 5.31 Transcript Type= NA
chr13	110892698	110915210	110892698	110915210	-	transcript1563.chr13.nic@ANKRD10	transcript1563.chr13.nic	protein_coding	110914725,110910618,110906033,110892698	110915210,110910770,110906124,110893263	Gene ID= ENSG00000088448.14 TPM= 14 Transcript Type= NA
chr13	110898740	110914938	110898740	110914938	-	transcript1565.chr13.nic@ANKRD10	transcript1565.chr13.nic	protein_coding	110914725,110910618,110898740	110914938,110910770,110906124	Gene ID= ENSG00000088448.14 TPM= 22.2 Transcript Type= NA
chr13	110878540	110915069	110878540	110915069	-	ENST00000267339.6@ANKRD10	ENST00000267339.6	protein_coding	110914725,110910618,110906033,110893028,110883698,110878540	110915069,110910770,110906124,110893263,110883793,110880112	Gene ID= ENSG00000088448.14 TPM= 87.84 Transcript Type= protein_coding
chr13	111153717	111281109	111153717	111281109	+	transcript1571.chr13.nic@ARHGEF7	transcript1571.chr13.nic	protein_coding	111153717,111205289,111209872,111217679,111233205,111243872,111244199,111267548,111273814,111274731,111275532,111277587,111280272,111280538	111153991,111205373,111210002,111217880,111233293,111243966,111244294,111267670,111273952,111274790,111275678,111277673,111280350,111281109	Gene ID= ENSG00000102606.17 TPM= 1.93 Transcript Type= NA
chr13	111281183	111283148	111281183	111283148	-	transcript1574.chr13.nnic@NA	transcript1574.chr13.nnic	NA	111281183	111283148	Gene ID= novel_gene_chr13_1575 TPM= 16.41 Transcript Type= NA
chr13	112544556	112588182	112544556	112588182	-	transcript1581.chr13.nic@TUBGCP3	transcript1581.chr13.nic	protein_coding	112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112547620,112544556	112588182,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112547752,112545865	Gene ID= ENSG00000126216.13 TPM= 4.83 Transcript Type= NA
chr13	112485005	112588167	112485005	112588167	-	ENST00000261965.7@TUBGCP3	ENST00000261965.7	protein_coding	112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112547620,112545699,112527374,112526942,112522320,112519886,112518975,112516440,112504626,112504032,112499045,112489581,112485005	112588167,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112547752,112545865,112527484,112527050,112522509,112520021,112519043,112516575,112504714,112504163,112499185,112489697,112486151	Gene ID= ENSG00000126216.13 TPM= 24.13 Transcript Type= protein_coding
chr13	112880972	112884513	112880972	112884513	+	ENST00000614170.1@ATP11A	ENST00000614170.1	protein_coding	112880972	112884513	Gene ID= ENSG00000068650.18 TPM= 2.9 Transcript Type= retained_intron
chr13	112884459	112886985	112884459	112886985	+	transcript1583.chr13.nnic@NA	transcript1583.chr13.nnic	NA	112884459	112886985	Gene ID= novel_gene_chr13_1584 TPM= 1.93 Transcript Type= NA
chr13	112979427	113098546	112979427	113098546	+	transcript1585.chr13.nic@MCF2L	transcript1585.chr13.nic	protein_coding	112979427,113014763,113024644,113045271,113060593,113064304,113064936,113066046,113070059,113074444,113074998,113075966,113077052,113078363,113078666,113081213,113082427,113083998,113084892,113085086,113086124,113087235,113087707,113088327,113088562,113089610,113094514,113096371,113096550,113096774	112979758,113014846,113024758,113045361,113060712,113064420,113065085,113066170,113070173,113074563,113075189,113076157,113077211,113078436,113078739,113081279,113082542,113084067,113084984,113085178,113086249,113087456,113087799,113088405,113088628,113089728,113094635,113096483,113096653,113098546	Gene ID= ENSG00000126217.20 TPM= 7.72 Transcript Type= NA
chr13	113177577	113208711	113177577	113208711	-	ENST00000337344.8@PCID2	ENST00000337344.8	protein_coding	113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113177577	113208711,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287	Gene ID= ENSG00000126226.21 TPM= 28.96 Transcript Type= protein_coding
chr13	113177611	113208715	113177611	113208715	-	ENST00000375479.6@PCID2	ENST00000375479.6	protein_coding	113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113178174,113177611	113208715,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287,113177976	Gene ID= ENSG00000126226.21 TPM= 4.83 Transcript Type= protein_coding
chr13	113177611	113208666	113177611	113208666	-	ENST00000375477.5@PCID2	ENST00000375477.5	protein_coding	113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113178174,113177611	113208666,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287,113178008	Gene ID= ENSG00000126226.21 TPM= 8.69 Transcript Type= protein_coding
chr13	113208694	113265072	113208694	113265072	+	ENST00000326335.8@CUL4A	ENST00000326335.8	protein_coding	113208694,113209973,113218945,113227976,113229446,113233153,113233897,113235063,113236823,113239433,113242968,113244410,113244949,113245152,113245956,113253082,113254693,113254953,113260607,113263487	113208752,113210088,113219048,113228045,113229519,113233339,113233986,113235145,113236890,113239551,113243160,113244514,113245059,113245237,113246063,113253195,113254798,113255125,113260759,113265072	Gene ID= ENSG00000139842.14 TPM= 7.56 Transcript Type= protein_coding
chr13	113208193	113265072	113208193	113265072	+	ENST00000375441.7@CUL4A	ENST00000375441.7	protein_coding	113208193,113209973,113218945,113227976,113229446,113233177,113233897,113235063,113236823,113239433,113242968,113244410,113244949,113245152,113245956,113253082,113254693,113254953,113260607,113263487	113208607,113210088,113219048,113228045,113229519,113233339,113233986,113235145,113236890,113239551,113243160,113244514,113245059,113245237,113246063,113253195,113254798,113255125,113260759,113265072	Gene ID= ENSG00000139842.14 TPM= 20.11 Transcript Type= protein_coding
chr13	113209600	113230212	113209600	113230212	+	ENST00000488558.2@CUL4A	ENST00000488558.2	protein_coding	113209600,113209973,113218945,113227976,113229446,113229642	113209775,113210088,113219048,113228045,113229519,113230212	Gene ID= ENSG00000139842.14 TPM= 3.01 Transcript Type= protein_coding
chr13	113297241	113323672	113297241	113323672	+	ENST00000332556.4@LAMP1	ENST00000332556.4	protein_coding	113297241,113306485,113309643,113310709,113319469,113320345,113321404,113321557,113322282	113297495,113306606,113309862,113310867,113319656,113320470,113321470,113321727,113323672	Gene ID= ENSG00000185896.10 TPM= 12.07 Transcript Type= protein_coding
chr13	113324190	113364126	113324190	113364126	-	ENST00000375431.8@GRTP1	ENST00000375431.8	protein_coding	113364020,113363762,113355323,113350849,113344863,113325919,113325661,113324190	113364126,113363910,113355481,113350973,113344959,113326091,113325846,113324577	Gene ID= ENSG00000139835.13 TPM= 1.93 Transcript Type= protein_coding
chr13	113324845	113364148	113324845	113364148	-	ENST00000375430.8@GRTP1	ENST00000375430.8	protein_coding	113364020,113363762,113355323,113350849,113344863,113325919,113324845	113364148,113363910,113355481,113350973,113344959,113326091,113325846	Gene ID= ENSG00000139835.13 TPM= 1.93 Transcript Type= protein_coding
chr13	113358682	113364105	113358682	113364105	-	transcript1656.chr13.nic@GRTP1	transcript1656.chr13.nic	protein_coding	113364020,113363762,113358682	113364105,113363910,113360284	Gene ID= ENSG00000139835.13 TPM= 3.86 Transcript Type= NA
chr13	113399614	113410978	113399614	113410978	-	transcript1671.chr13.nnic@ADPRHL1	transcript1671.chr13.nnic	protein_coding	113410856,113409926,113399614	113410978,113410458,113400191	Gene ID= ENSG00000153531.13 TPM= 39.58 Transcript Type= NA
chr13	113400458	113407423	113400458	113407423	-	transcript1689.chr13.nnic@ADPRHL1	transcript1689.chr13.nnic	protein_coding	113405559,113400458	113407423,113402172	Gene ID= ENSG00000153531.13 TPM= 8.69 Transcript Type= NA
chr13	113400458	113403096	113400458	113403096	-	transcript1690.chr13.nnic@ADPRHL1	transcript1690.chr13.nnic	protein_coding	113402817,113400458	113403096,113402508	Gene ID= ENSG00000153531.13 TPM= 445.97 Transcript Type= NA
chr13	113400458	113407387	113400458	113407387	-	transcript1691.chr13.nnic@ADPRHL1	transcript1691.chr13.nnic	protein_coding	113404065,113400458	113407387,113404028	Gene ID= ENSG00000153531.13 TPM= 17.38 Transcript Type= NA
chr13	113400458	113404387	113400458	113404387	-	transcript1694.chr13.nnic@ADPRHL1	transcript1694.chr13.nnic	protein_coding	113404317,113400458	113404387,113404172	Gene ID= ENSG00000153531.13 TPM= 730.74 Transcript Type= NA
chr13	113400943	113413822	113400943	113413822	-	transcript1696.chr13.nnic@ADPRHL1	transcript1696.chr13.nnic	protein_coding	113413600,113400943	113413822,113408220	Gene ID= ENSG00000153531.13 TPM= 184.37 Transcript Type= NA
chr13	113405507	113413822	113405507	113413822	-	transcript1699.chr13.nnic@ADPRHL1	transcript1699.chr13.nnic	protein_coding	113413600,113405507	113413822,113408220	Gene ID= ENSG00000153531.13 TPM= 36.68 Transcript Type= NA
chr13	113405396	113408623	113405396	113408623	+	transcript1663.chr13.nnic@NA	transcript1663.chr13.nnic	NA	113405396,113406428,113407545	113405565,113406673,113408623	Gene ID= novel_gene_chr13_1664 TPM= 7.08 Transcript Type= NA
chr13	113405396	113408625	113405396	113408625	+	transcript1681.chr13.nnic@NA	transcript1681.chr13.nnic	NA	113405396,113406428	113405565,113408625	Gene ID= novel_gene_chr13_1682 TPM= 16.41 Transcript Type= NA
chr13	113405402	113408623	113405402	113408623	+	transcript1665.chr13.nnic@NA	transcript1665.chr13.nnic	NA	113405402,113406428,113407545	113405522,113406673,113408623	Gene ID= novel_gene_chr13_1666 TPM= 4.18 Transcript Type= NA
chr13	113405685	113408623	113405685	113408623	+	transcript1684.chr13.nnic@NA	transcript1684.chr13.nnic	NA	113405685,113407545	113406673,113408623	Gene ID= novel_gene_chr13_1685 TPM= 6.11 Transcript Type= NA
chr13	113409760	113411095	113409760	113411095	+	transcript1705.chr13.nnic@NA	transcript1705.chr13.nnic	NA	113409760	113411095	Gene ID= novel_gene_chr13_1706 TPM= 4.83 Transcript Type= NA
chr13	113421949	113453478	113421949	113453478	-	transcript1742.chr13.nnic@ADPRHL1	transcript1742.chr13.nnic	protein_coding	113453224,113444425,113433742,113428952,113425052,113424217,113422826,113421949	113453478,113444589,113433867,113429092,113425179,113424349,113422979,113422671	Gene ID= ENSG00000153531.13 TPM= 13.83 Transcript Type= NA
chr13	113421941	113453478	113421941	113453478	-	transcript1768.chr13.nnic@ADPRHL1	transcript1768.chr13.nnic	protein_coding	113453224,113444425,113433742,113428952,113425052,113421941	113453478,113444589,113433867,113429092,113425179,113422979	Gene ID= ENSG00000153531.13 TPM= 12.87 Transcript Type= NA
chr13	113422633	113453524	113422633	113453524	-	ENST00000375418.7@ADPRHL1	ENST00000375418.7	protein_coding	113453224,113444425,113433742,113428952,113425052,113424217,113422633	113453524,113444589,113433867,113429092,113425179,113424349,113422979	Gene ID= ENSG00000153531.13 TPM= 8.04 Transcript Type= protein_coding
chr13	113415471	113416258	113415471	113416258	+	transcript1776.chr13.nnic@NA	transcript1776.chr13.nnic	NA	113415471	113416258	Gene ID= novel_gene_chr13_1777 TPM= 2.9 Transcript Type= NA
chr13	113450451	113453312	113450451	113453312	-	transcript1778.chr13.nnic@NA	transcript1778.chr13.nnic	NA	113450451	113453312	Gene ID= novel_gene_chr13_1779 TPM= 4.83 Transcript Type= NA
chr13	113455819	113490961	113455819	113490961	-	transcript1760.chr13.nnic@DCUN1D2	transcript1760.chr13.nnic	protein_coding	113490667,113483840,113480575,113474124,113461054,113459312,113455819	113490961,113484196,113480743,113474254,113461136,113459408,113458108	Gene ID= ENSG00000150401.14 TPM= 15.61 Transcript Type= NA
chr13	113491022	113550195	113491022	113550195	+	transcript1720.chr13.nnic@TMCO3	transcript1720.chr13.nnic	protein_coding	113491022,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113537737,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113538881,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 1.93 Transcript Type= NA
chr13	113491071	113550195	113491071	113550195	+	transcript1723.chr13.nnic@TMCO3	transcript1723.chr13.nnic	protein_coding	113491071,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045,113539357,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113534240,113539507,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 1.93 Transcript Type= NA
chr13	113490732	113550195	113490732	113550195	+	transcript1724.chr13.nnic@TMCO3	transcript1724.chr13.nnic	protein_coding	113490732,113495502,113498342,113499958,113501752,113503496,113520616,113537737,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113503588,113520733,113538881,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 1.93 Transcript Type= NA
chr13	113490732	113550195	113490732	113550195	+	transcript1726.chr13.nnic@TMCO3	transcript1726.chr13.nnic	protein_coding	113490732,113495502,113498342,113501752,113503496,113510238,113520616,113534045,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113501880,113503588,113510424,113520733,113534240,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 1.93 Transcript Type= NA
chr13	113491034	113550195	113491034	113550195	+	transcript1727.chr13.nnic@TMCO3	transcript1727.chr13.nnic	protein_coding	113491034,113495502,113498342,113501752,113503496,113510238,113520616,113537737,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113501880,113503588,113510424,113520733,113538881,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 2.9 Transcript Type= NA
chr13	113491034	113550195	113491034	113550195	+	transcript1736.chr13.nnic@TMCO3	transcript1736.chr13.nnic	protein_coding	113491034,113495502,113498342,113501752,113503496,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113501880,113503588,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 1.93 Transcript Type= NA
chr13	113491008	113535286	113491008	113535286	+	transcript1739.chr13.nnic@TMCO3	transcript1739.chr13.nnic	protein_coding	113491008,113495502,113498342,113501752,113503496,113510238,113520616,113534045	113491273,113496025,113498521,113501880,113503588,113510424,113520733,113535286	Gene ID= ENSG00000150403.17 TPM= 2.9 Transcript Type= NA
chr13	113490995	113550195	113490995	113550195	+	ENST00000434316.6@TMCO3	ENST00000434316.6	protein_coding	113490995,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113534240,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 9.65 Transcript Type= protein_coding
chr13	113491096	113535286	113491096	113535286	+	ENST00000474393.5@TMCO3	ENST00000474393.5	protein_coding	113491096,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113535286	Gene ID= ENSG00000150403.17 TPM= 1.93 Transcript Type= protein_coding
chr13	113584702	113641470	113584702	113641470	+	transcript1783.chr13.nnic@TFDP1	transcript1783.chr13.nnic	protein_coding	113584702,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637884,113641470	Gene ID= ENSG00000198176.12 TPM= 12.55 Transcript Type= NA
chr13	113584702	113641465	113584702	113641465	+	transcript1789.chr13.nnic@TFDP1	transcript1789.chr13.nnic	protein_coding	113584702,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113640120	113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113641465	Gene ID= ENSG00000198176.12 TPM= 1.93 Transcript Type= NA
chr13	113584702	113641470	113584702	113641470	+	transcript1790.chr13.nnic@TFDP1	transcript1790.chr13.nnic	protein_coding	113584702,113585774,113610996,113623180,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584888,113585849,113611062,113623286,113633285,113634033,113634602,113636128,113636700,113637884,113641470	Gene ID= ENSG00000198176.12 TPM= 1.93 Transcript Type= NA
chr13	113584741	113641470	113584741	113641470	+	ENST00000375370.9@TFDP1	ENST00000375370.9	protein_coding	113584741,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637896,113641470	Gene ID= ENSG00000198176.12 TPM= 54.06 Transcript Type= protein_coding
chr13	113584733	113586180	113584733	113586180	+	ENST00000464794.5@TFDP1	ENST00000464794.5	protein_coding	113584733,113585774,113585966	113584888,113585849,113586180	Gene ID= ENSG00000198176.12 TPM= 4.83 Transcript Type= processed_transcript
chr13	113820549	113864120	113820549	113864120	-	transcript1811.chr13.nnic@GAS6	transcript1811.chr13.nnic	protein_coding	113863833,113863575,113848026,113846527,113839728,113838069,113835513,113834551,113832634,113832299,113828547,113826996,113823375,113821958,113820549	113864120,113863741,113848050,113846589,113839850,113838191,113835635,113834672,113832881,113832488,113828711,113827164,113823550,113822186,113821018	Gene ID= ENSG00000183087.14 TPM= 44.04 Transcript Type= NA
chr13	113820558	113864067	113820558	113864067	-	ENST00000327773.6@GAS6	ENST00000327773.6	protein_coding	113863833,113863575,113848026,113846527,113839728,113838069,113835513,113834551,113832634,113832299,113828547,113826996,113823375,113821958,113820558	113864067,113863741,113848050,113846589,113839850,113838191,113835635,113834672,113832752,113832488,113828711,113827164,113823550,113822186,113821018	Gene ID= ENSG00000183087.14 TPM= 562.46 Transcript Type= protein_coding
chr13	113926514	113928844	113926514	113928844	-	ENST00000562710.1@LINC00565	ENST00000562710.1	lincRNA	113926514	113928844	Gene ID= ENSG00000260910.1 TPM= 3.86 Transcript Type= lincRNA
chr13	114036555	114132654	114036555	114132654	-	transcript1832.chr13.nic@RASA3	transcript1832.chr13.nic	protein_coding	114132435,114073720,114052052,114036555	114132654,114073837,114052155,114041094	Gene ID= ENSG00000185989.10 TPM= 1.93 Transcript Type= NA
chr13	113977783	114132611	113977783	114132611	-	ENST00000334062.7@RASA3	ENST00000334062.7	protein_coding	114132435,114073720,114052052,114041000,114029811,114027847,114027389,114024279,114021404,114018763,114018104,114017237,114016197,114015209,114013142,114011171,114009387,114007533,114000826,113999585,113996531,113992485,113981675,113977783	114132611,114073837,114052155,114041094,114029887,114027927,114027461,114024355,114021508,114018919,114018252,114017351,114016271,114015332,114013248,114011248,114009464,114007606,114000932,113999667,113996739,113992588,113981858,113979422	Gene ID= ENSG00000185989.10 TPM= 27.99 Transcript Type= protein_coding
chr13	114234887	114272675	114234887	114272675	+	ENST00000360383.7@CDC16	ENST00000360383.7	protein_coding	114234887,114236645,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184,114272564	114235132,114236699,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272481,114272675	Gene ID= ENSG00000130177.14 TPM= 21.88 Transcript Type= protein_coding
chr13	114234888	114272675	114234888	114272675	+	transcript1839.chr13.nic@CDC16	transcript1839.chr13.nic	protein_coding	114234888,114236645,114236799,114238990,114239350,114242121,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184,114272564	114235132,114236699,114236896,114239028,114239490,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272481,114272675	Gene ID= ENSG00000130177.14 TPM= 2.58 Transcript Type= NA
chr13	114234888	114272675	114234888	114272675	+	transcript1840.chr13.nnic@CDC16	transcript1840.chr13.nnic	protein_coding	114234888,114236645,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114272184	114235132,114236699,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114272675	Gene ID= ENSG00000130177.14 TPM= 8.04 Transcript Type= NA
chr13	114234888	114272675	114234888	114272675	+	transcript1841.chr13.nnic@CDC16	transcript1841.chr13.nnic	protein_coding	114234888,114236645,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114262879,114265150,114272184	114235132,114236699,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114263014,114265240,114272675	Gene ID= ENSG00000130177.14 TPM= 2.25 Transcript Type= NA
chr13	114234888	114272675	114234888	114272675	+	transcript1845.chr13.nnic@CDC16	transcript1845.chr13.nnic	protein_coding	114234888,114236645,114236799,114238990,114239350,114242121,114243856,114246000,114246931,114250549,114257078,114259335,114262879,114265150,114272184,114272564	114235132,114236699,114236896,114239028,114239490,114243348,114244969,114246049,114247004,114250674,114257230,114259398,114263014,114265240,114272481,114272675	Gene ID= ENSG00000130177.14 TPM= 2.58 Transcript Type= NA
chr13	114234977	114272675	114234977	114272675	+	ENST00000356221.7@CDC16	ENST00000356221.7	protein_coding	114234977,114236645,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184	114235132,114236699,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272675	Gene ID= ENSG00000130177.14 TPM= 19.62 Transcript Type= protein_coding
chr13	114281921	114305808	114281921	114305808	+	transcript1850.chr13.nnic@UPF3A	transcript1850.chr13.nnic	protein_coding	114281921,114282837,114283787,114286302,114286519,114291489,114291634,114301731,114304789	114282127,114282943,114284358,114286400,114286629,114291544,114291792,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 2.97 Transcript Type= NA
chr13	114281921	114305808	114281921	114305808	+	transcript1851.chr13.nic@UPF3A	transcript1851.chr13.nic	protein_coding	114281921,114282837,114286302,114286519,114291489,114291634,114298840,114301731,114304789	114282127,114282943,114286400,114286629,114291544,114291792,114299000,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 2.97 Transcript Type= NA
chr13	114281584	114305817	114281584	114305817	+	ENST00000375299.7@UPF3A	ENST00000375299.7	protein_coding	114281584,114282021,114282837,114286302,114286519,114291489,114291634,114298840,114301731,114304789	114281846,114282127,114282943,114286400,114286629,114291544,114291792,114299000,114302025,114305817	Gene ID= ENSG00000169062.14 TPM= 1.69 Transcript Type= protein_coding
chr13	114285485	114305808	114285485	114305808	+	transcript1867.chr13.nic@UPF3A	transcript1867.chr13.nic	protein_coding	114285485,114286519,114291489,114291634,114301731,114304789	114286400,114286629,114291544,114291792,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 2.97 Transcript Type= NA
chr13	114281603	114282270	114281603	114282270	+	ENST00000492270.1@UPF3A	ENST00000492270.1	protein_coding	114281603,114282021	114281846,114282270	Gene ID= ENSG00000169062.14 TPM= 6.76 Transcript Type= protein_coding
chr13	114281968	114284547	114281968	114284547	+	transcript1873.chr13.nnic@NA	transcript1873.chr13.nnic	NA	114281968	114284547	Gene ID= novel_gene_chr13_1874 TPM= 1.93 Transcript Type= NA
chr13	114314490	114322385	114314490	114322385	+	transcript1875.chr13.nic@CHAMP1	transcript1875.chr13.nic	protein_coding	114314490,114321110,114322063	114314643,114321232,114322385	Gene ID= ENSG00000198824.5 TPM= 2.9 Transcript Type= NA
chr13	114314506	114322385	114314506	114322385	+	transcript1877.chr13.nnic@CHAMP1	transcript1877.chr13.nnic	protein_coding	114314506,114321149,114322063	114314643,114321232,114322385	Gene ID= ENSG00000198824.5 TPM= 2.9 Transcript Type= NA
chr13	114314513	114327328	114314513	114327328	+	ENST00000361283.2@CHAMP1	ENST00000361283.2	protein_coding	114314513,114321110,114323788	114314643,114321232,114327328	Gene ID= ENSG00000198824.5 TPM= 5.79 Transcript Type= protein_coding
chr14	20286228	20305994	20286228	20305994	-	ENST00000258821.7@TTC5	ENST00000258821.7	protein_coding	20305887,20301833,20300607,20299298,20298797,20296390,20295708,20295312,20291983,20286228	20305994,20301965,20300818,20299448,20298888,20296446,20295854,20295526,20292127,20289746	Gene ID= ENSG00000136319.11 TPM= 1.93 Transcript Type= protein_coding
chr14	20311370	20333314	20311370	20333314	-	transcript7.chr14.nnic@CCNB1IP1	transcript7.chr14.nnic	protein_coding	20333254,20329174,20326716,20325539,20316227,20315781,20315485,20313468,20311370	20333314,20329373,20326793,20325653,20316560,20315850,20315618,20313801,20311752	Gene ID= ENSG00000100814.17 TPM= 3.46 Transcript Type= NA
chr14	20311368	20333312	20311368	20333312	-	ENST00000353689.8@CCNB1IP1	ENST00000353689.8	protein_coding	20333254,20326716,20325539,20316227,20313468,20311368	20333312,20326793,20325653,20316560,20313801,20311752	Gene ID= ENSG00000100814.17 TPM= 2.17 Transcript Type= protein_coding
chr14	20311370	20314962	20311370	20314962	-	transcript11.chr14.nic@CCNB1IP1	transcript11.chr14.nic	protein_coding	20313468,20311370	20314962,20311752	Gene ID= ENSG00000100814.17 TPM= 2.49 Transcript Type= NA
chr14	20311370	20333288	20311370	20333288	-	ENST00000358932.8@CCNB1IP1	ENST00000358932.8	protein_coding	20333254,20329174,20326716,20325539,20316227,20313468,20311370	20333288,20329373,20326793,20325653,20316560,20313801,20311752	Gene ID= ENSG00000100814.17 TPM= 20.83 Transcript Type= protein_coding
chr14	20343582	20357905	20343582	20357905	+	ENST00000429687.7@PARP2	ENST00000429687.7	protein_coding	20343582,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396,20357638	20343687,20345087,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357520,20357905	Gene ID= ENSG00000129484.13 TPM= 3.86 Transcript Type= protein_coding
chr14	20343615	20357904	20343615	20357904	+	ENST00000250416.9@PARP2	ENST00000250416.9	protein_coding	20343615,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396,20357638	20343687,20345126,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357520,20357904	Gene ID= ENSG00000129484.13 TPM= 2.9 Transcript Type= protein_coding
chr14	20343614	20357903	20343614	20357903	+	transcript17.chr14.nic@PARP2	transcript17.chr14.nic	protein_coding	20343614,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396	20343687,20345087,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357903	Gene ID= ENSG00000129484.13 TPM= 1.93 Transcript Type= NA
chr14	20343614	20357898	20343614	20357898	+	transcript18.chr14.nic@PARP2	transcript18.chr14.nic	protein_coding	20343614,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357638	20343687,20345126,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357898	Gene ID= ENSG00000129484.13 TPM= 1.93 Transcript Type= NA
chr14	20343614	20357902	20343614	20357902	+	transcript19.chr14.nic@PARP2	transcript19.chr14.nic	protein_coding	20343614,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051	20343687,20345126,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357902	Gene ID= ENSG00000129484.13 TPM= 3.86 Transcript Type= NA
chr14	20365667	20413421	20365667	20413421	-	ENST00000262715.9@TEP1	ENST00000262715.9	protein_coding	20413405,20407873,20406233,20405451,20404611,20403723,20403377,20401457,20400984,20396621,20395859,20395450,20391599,20390938,20390681,20389610,20389238,20387905,20386447,20386075,20384985,20384600,20384391,20384038,20383743,20383488,20383174,20382623,20382224,20381913,20381553,20381313,20380931,20380235,20379930,20378981,20378754,20378380,20378024,20377600,20377280,20376104,20375755,20374429,20373678,20373507,20373270,20373011,20372733,20371489,20371218,20369674,20369344,20368798,20365667	20413421,20408463,20406400,20405585,20404772,20403884,20403448,20401581,20401141,20396730,20395949,20395627,20391767,20391096,20390758,20389740,20389297,20388063,20386623,20386195,20385109,20384713,20384508,20384232,20383918,20383644,20383353,20382715,20382356,20382063,20381686,20381401,20381045,20380475,20380053,20379105,20378853,20378535,20378236,20377753,20377492,20376264,20375868,20374536,20373810,20373583,20373402,20373147,20372857,20371632,20371314,20369779,20369576,20368902,20368559	Gene ID= ENSG00000129566.12 TPM= 1.93 Transcript Type= protein_coding
chr14	20426722	20436153	20426722	20436153	-	transcript26.chr14.nnic@KLHL33	transcript26.chr14.nnic	protein_coding	20436099,20435064,20429795,20429502,20426722	20436153,20435830,20430719,20429669,20429401	Gene ID= ENSG00000185271.7 TPM= 4.83 Transcript Type= NA
chr14	20446668	20455105	20446668	20455105	-	ENST00000206542.8@OSGEP	ENST00000206542.8	protein_coding	20454569,20452329,20451974,20449171,20448964,20448733,20448106,20447904,20447615,20447422,20446668	20455105,20452448,20452149,20449266,20449013,20448811,20448171,20447994,20447690,20447520,20447279	Gene ID= ENSG00000092094.10 TPM= 15.44 Transcript Type= protein_coding
chr14	20455195	20457767	20455195	20457767	+	ENST00000216714.7@APEX1	ENST00000216714.7	protein_coding	20455195,20455578,20455914,20456668,20456991	20455394,20455703,20456101,20456860,20457767	Gene ID= ENSG00000100823.11 TPM= 81.09 Transcript Type= protein_coding
chr14	20455191	20457772	20455191	20457772	+	ENST00000555414.5@APEX1	ENST00000555414.5	protein_coding	20455191,20455578,20455914,20456668,20456991	20455338,20455703,20456101,20456860,20457772	Gene ID= ENSG00000100823.11 TPM= 7.72 Transcript Type= protein_coding
chr14	20455233	20457767	20455233	20457767	+	transcript39.chr14.nnic@APEX1	transcript39.chr14.nnic	protein_coding	20455233,20455735,20455914,20456668,20456991	20455394,20455773,20456101,20456860,20457767	Gene ID= ENSG00000100823.11 TPM= 4.83 Transcript Type= NA
chr14	20455226	20457734	20455226	20457734	+	ENST00000553555.5@APEX1	ENST00000553555.5	protein_coding	20455226,20455914,20456668,20456991	20455703,20456101,20456860,20457734	Gene ID= ENSG00000100823.11 TPM= 16.41 Transcript Type= retained_intron
chr14	20455240	20457738	20455240	20457738	+	ENST00000557159.5@APEX1	ENST00000557159.5	protein_coding	20455240,20456668,20456991	20456101,20456860,20457738	Gene ID= ENSG00000100823.11 TPM= 7.72 Transcript Type= retained_intron
chr14	20455226	20457767	20455226	20457767	+	ENST00000398030.8@APEX1	ENST00000398030.8	protein_coding	20455226,20455578,20455914,20456668,20456991	20455328,20455703,20456101,20456860,20457767	Gene ID= ENSG00000100823.11 TPM= 2.9 Transcript Type= protein_coding
chr14	20457719	20461612	20457719	20461612	-	ENST00000250489.8@TMEM55B	ENST00000250489.8	protein_coding	20461184,20460655,20460192,20459628,20459388,20459206,20457719	20461612,20460845,20460298,20459733,20459440,20459296,20458702	Gene ID= ENSG00000165782.10 TPM= 59.85 Transcript Type= protein_coding
chr14	20457858	20461465	20457858	20461465	-	ENST00000398020.6@TMEM55B	ENST00000398020.6	protein_coding	20461163,20460655,20460192,20459628,20459388,20459206,20457858	20461465,20460845,20460298,20459733,20459440,20459296,20458702	Gene ID= ENSG00000165782.10 TPM= 105.22 Transcript Type= protein_coding
chr14	20457857	20461434	20457857	20461434	-	transcript45.chr14.nnic@NA	transcript45.chr14.nnic	NA	20457857	20461434	Gene ID= novel_gene_chr14_46 TPM= 1.93 Transcript Type= NA
chr14	20469379	20477094	20469379	20477094	+	ENST00000361505.9@PNP	ENST00000361505.9	protein_coding	20469379,20472308,20474472,20474773,20475062,20476384	20469535,20472477,20474575,20474948,20475252,20477094	Gene ID= ENSG00000198805.11 TPM= 1.93 Transcript Type= protein_coding
chr14	20684100	20701215	20684100	20701215	+	ENST00000555835.2@RNASE4	ENST00000555835.2	protein_coding	20684100,20699355	20684758,20701215	Gene ID= ENSG00000258818.3 TPM= 4.83 Transcript Type= protein_coding
chr14	20684177	20694186	20684177	20694186	+	ENST00000336811.10@ANG	ENST00000336811.10	protein_coding	20684177,20693547	20684758,20694186	Gene ID= ENSG00000214274.9 TPM= 1.93 Transcript Type= protein_coding
chr14	20801346	20802855	20801346	20802855	-	ENST00000340900.3@RNASE1	ENST00000340900.3	protein_coding	20802797,20802249,20801346	20802855,20802319,20802093	Gene ID= ENSG00000129538.13 TPM= 32.82 Transcript Type= protein_coding
chr14	20801228	20803278	20801228	20803278	-	ENST00000397967.4@RNASE1	ENST00000397967.4	protein_coding	20802797,20801228	20803278,20802093	Gene ID= ENSG00000129538.13 TPM= 77.22 Transcript Type= protein_coding
chr14	20955452	20956436	20955452	20956436	+	ENST00000304625.2@RNASE2	ENST00000304625.2	protein_coding	20955452,20955767	20955536,20956436	Gene ID= ENSG00000169385.2 TPM= 2.9 Transcript Type= protein_coding
chr14	20989770	20997035	20989770	20997035	+	ENST00000339374.10@METTL17	ENST00000339374.10	protein_coding	20989770,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996785	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997035	Gene ID= ENSG00000165792.17 TPM= 27.99 Transcript Type= protein_coding
chr14	20989980	20997030	20989980	20997030	+	transcript63.chr14.nnic@METTL17	transcript63.chr14.nnic	protein_coding	20989980,20990230,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996785	20990077,20990383,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997030	Gene ID= ENSG00000165792.17 TPM= 1.93 Transcript Type= NA
chr14	20989987	20997030	20989987	20997030	+	transcript67.chr14.nic@METTL17	transcript67.chr14.nic	protein_coding	20989987,20990230,20990464,20992124,20992541,20993118,20994543,20994794,20995901,20996209,20996527,20996785	20990077,20990383,20990598,20992205,20992622,20994063,20994613,20995233,20995951,20996292,20996711,20997030	Gene ID= ENSG00000165792.17 TPM= 1.93 Transcript Type= NA
chr14	20989980	20997030	20989980	20997030	+	transcript68.chr14.nic@METTL17	transcript68.chr14.nic	protein_coding	20989980,20992092,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996785	20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997030	Gene ID= ENSG00000165792.17 TPM= 1.93 Transcript Type= NA
chr14	20989980	20997009	20989980	20997009	+	ENST00000382985.8@METTL17	ENST00000382985.8	protein_coding	20989980,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20997009	Gene ID= ENSG00000165792.17 TPM= 2.9 Transcript Type= protein_coding
chr14	20989987	20997030	20989987	20997030	+	ENST00000556670.6@METTL17	ENST00000556670.6	protein_coding	20989987,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996812	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997030	Gene ID= ENSG00000165792.17 TPM= 1.93 Transcript Type= protein_coding
chr14	20990003	20997016	20990003	20997016	+	ENST00000557550.6@METTL17	ENST00000557550.6	protein_coding	20990003,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996785	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997016	Gene ID= ENSG00000165792.17 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr14	20989994	20997010	20989994	20997010	+	ENST00000555533.6@METTL17	ENST00000555533.6	protein_coding	20989994,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20997010	Gene ID= ENSG00000165792.17 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr14	20989994	20996995	20989994	20996995	+	ENST00000555640.6@METTL17	ENST00000555640.6	protein_coding	20989994,20990230,20990464,20992092,20992541,20993118,20994543,20994794,20995901,20996527	20990077,20990383,20990598,20992205,20992622,20994063,20994613,20995233,20996292,20996995	Gene ID= ENSG00000165792.17 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr14	21016763	21025776	21016763	21025776	-	ENST00000298687.9@NDRG2	ENST00000298687.9	protein_coding	21025677,21024030,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016763	21025776,21024096,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 414.95 Transcript Type= protein_coding
chr14	21016764	21025776	21016764	21025776	-	ENST00000397858.5@NDRG2	ENST00000397858.5	protein_coding	21025677,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016764	21025776,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 181.21 Transcript Type= protein_coding
chr14	21016763	21025823	21016763	21025823	-	ENST00000350792.7@NDRG2	ENST00000350792.7	protein_coding	21025677,21024030,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016763	21025823,21024096,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 11.56 Transcript Type= protein_coding
chr14	21016772	21025819	21016772	21025819	-	ENST00000360463.7@NDRG2	ENST00000360463.7	protein_coding	21025677,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772	21025819,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 21.07 Transcript Type= protein_coding
chr14	21016772	21025094	21016772	21025094	-	ENST00000397853.7@NDRG2	ENST00000397853.7	protein_coding	21025029,21024030,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772	21025094,21024096,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 332.28 Transcript Type= protein_coding
chr14	21016773	21025105	21016773	21025105	-	ENST00000397851.6@NDRG2	ENST00000397851.6	protein_coding	21025029,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016773	21025105,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 110.08 Transcript Type= protein_coding
chr14	21016773	21025105	21016773	21025105	-	ENST00000554143.5@NDRG2	ENST00000554143.5	protein_coding	21025029,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016773	21025105,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 22.51 Transcript Type= protein_coding
chr14	21070226	21089545	21070226	21089545	+	transcript156.chr14.nnic@ARHGEF40	transcript156.chr14.nnic	protein_coding	21070226,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087320,21087968,21088830,21089014	21070399,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21087463,21088098,21088876,21089545	Gene ID= ENSG00000165801.9 TPM= 13.51 Transcript Type= NA
chr14	21070270	21090240	21070270	21090240	+	ENST00000298694.8@ARHGEF40	ENST00000298694.8	protein_coding	21070270,21073045,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087320,21087968,21088830,21089014	21070399,21073242,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21087463,21088098,21088876,21090240	Gene ID= ENSG00000165801.9 TPM= 2.9 Transcript Type= protein_coding
chr14	21090046	21098640	21090046	21098640	-	ENST00000360947.7@ZNF219	ENST00000360947.7	protein_coding	21098312,21093586,21091865,21091411,21090046	21098640,21093674,21093290,21091542,21091140	Gene ID= ENSG00000165804.15 TPM= 104.9 Transcript Type= protein_coding
chr14	21090082	21092997	21090082	21092997	-	transcript169.chr14.nnic@ZNF219	transcript169.chr14.nnic	protein_coding	21092571,21091865,21091411,21090082	21092997,21092477,21091542,21091140	Gene ID= ENSG00000165804.15 TPM= 11.27 Transcript Type= NA
chr14	21090069	21093398	21090069	21093398	-	transcript172.chr14.nnic@NA	transcript172.chr14.nnic	NA	21090069	21093398	Gene ID= novel_gene_chr14_173 TPM= 6.44 Transcript Type= NA
chr14	21200273	21202004	21200273	21202004	-	transcript174.chr14.nnic@NA	transcript174.chr14.nnic	NA	21200273	21202004	Gene ID= novel_gene_chr14_175 TPM= 1.93 Transcript Type= NA
chr14	21210550	21269425	21210550	21269425	-	transcript178.chr14.nnic@HNRNPC	transcript178.chr14.nnic	protein_coding	21269298,21262594,21233953,21230997,21230319,21212960,21211810,21211406,21210550	21269425,21263829,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 10.62 Transcript Type= NA
chr14	21210550	21269444	21210550	21269444	-	transcript183.chr14.nic@HNRNPC	transcript183.chr14.nic	protein_coding	21269298,21233953,21230997,21230319,21212960,21211810,21211406,21210550	21269444,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 29.92 Transcript Type= NA
chr14	21209136	21269494	21209136	21269494	-	ENST00000336053.10@HNRNPC	ENST00000336053.10	protein_coding	21269298,21233953,21230997,21230319,21212960,21211810,21209136	21269494,21234229,21231072,21230366,21213117,21211923,21211566	Gene ID= ENSG00000092199.17 TPM= 2.9 Transcript Type= protein_coding
chr14	21210937	21269425	21210937	21269425	-	ENST00000557201.5@HNRNPC	ENST00000557201.5	protein_coding	21269298,21233953,21230958,21230319,21212960,21211810,21211406,21210937	21269425,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 9.65 Transcript Type= protein_coding
chr14	21210937	21269442	21210937	21269442	-	ENST00000553300.5@HNRNPC	ENST00000553300.5	protein_coding	21269298,21263311,21233953,21230997,21230319,21212960,21211810,21211406,21210937	21269442,21263336,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 32.34 Transcript Type= protein_coding
chr14	21351472	21384266	21351472	21384266	-	ENST00000216297.6@SUPT16H	ENST00000216297.6	protein_coding	21383862,21373338,21371874,21370336,21369750,21369204,21368269,21366439,21365070,21364827,21363438,21363233,21363034,21362794,21362197,21361078,21360846,21360415,21359484,21358315,21357927,21357197,21354411,21353703,21353488,21351472	21384266,21373430,21372044,21370488,21369896,21369355,21368441,21366529,21365143,21364939,21363503,21363328,21363149,21362947,21362324,21361213,21360972,21360533,21359609,21358427,21358002,21357366,21354540,21353832,21353565,21352818	Gene ID= ENSG00000092201.9 TPM= 37.65 Transcript Type= protein_coding
chr14	21385486	21456080	21385486	21456080	-	ENST00000557364.5@CHD8	ENST00000557364.5	protein_coding	21456032,21430801,21428964,21427869,21426128,21415725,21415574,21414938,21414301,21412913,21409851,21408704,21408312,21406856,21405721,21405209,21403453,21403017,21402336,21401957,21401403,21400875,21400413,21400151,21399981,21399602,21397823,21395817,21395298,21394912,21394277,21393476,21393106,21392507,21391833,21391463,21390947,21385486	21456080,21431858,21429335,21428254,21426242,21415907,21415642,21414993,21414418,21412996,21409988,21408825,21408555,21407032,21405864,21405464,21403663,21403212,21402503,21402136,21401513,21401071,21400612,21400307,21400070,21399705,21397952,21395892,21395352,21395119,21394485,21394195,21393254,21392809,21391946,21391642,21391063,21386176	Gene ID= ENSG00000100888.12 TPM= 10.62 Transcript Type= protein_coding
chr14	21459020	21476973	21459020	21476973	-	ENST00000397762.5@RAB2B	ENST00000397762.5	protein_coding	21476827,21476528,21474867,21468670,21468357,21463656,21462350,21459020	21476973,21476599,21474934,21468752,21468449,21463767,21462418,21461303	Gene ID= ENSG00000129472.13 TPM= 2.9 Transcript Type= protein_coding
chr14	21477192	21489227	21477192	21489227	+	transcript217.chr14.nic@TOX4	transcript217.chr14.nic	protein_coding	21477192,21477496,21487451,21488590,21489173	21477284,21477564,21487693,21488850,21489227	Gene ID= ENSG00000092203.13 TPM= 10.62 Transcript Type= NA
chr14	21496896	21498896	21496896	21498896	+	transcript219.chr14.nnic@NA	transcript219.chr14.nnic	NA	21496896	21498896	Gene ID= novel_gene_chr14_220 TPM= 18.66 Transcript Type= NA
chr14	21498138	21511375	21498138	21511375	-	ENST00000298717.8@METTL3	ENST00000298717.8	protein_coding	21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499492,21499306,21499025,21498138	21511375,21503881,21503577,21501903,21501129,21500682,21499802,21499600,21499371,21499137,21498369	Gene ID= ENSG00000165819.11 TPM= 16.73 Transcript Type= protein_coding
chr14	21498138	21511370	21498138	21511370	-	transcript212.chr14.nic@METTL3	transcript212.chr14.nic	protein_coding	21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499025,21498138	21511370,21503881,21503577,21501903,21501129,21500682,21499802,21499600,21498369	Gene ID= ENSG00000165819.11 TPM= 5.15 Transcript Type= NA
chr14	21498173	21511310	21498173	21511310	-	ENST00000543235.5@METTL3	ENST00000543235.5	protein_coding	21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499025,21498173	21511310,21503881,21503577,21501824,21501129,21500682,21499802,21499600,21498369	Gene ID= ENSG00000165819.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr14	22564905	22589269	22564905	22589269	-	ENST00000250498.8@DAD1	ENST00000250498.8	protein_coding	22588947,22575059,22564905	22589269,22575233,22565137	Gene ID= ENSG00000129562.10 TPM= 72.4 Transcript Type= protein_coding
chr14	22595806	22598979	22595806	22598979	-	transcript233.chr14.nnic@NA	transcript233.chr14.nnic	NA	22595806	22598979	Gene ID= novel_gene_chr14_234 TPM= 1.93 Transcript Type= NA
chr14	22598237	22613215	22598237	22613215	+	ENST00000428304.6@ABHD4	ENST00000428304.6	protein_coding	22598237,22601667,22603390,22603925,22606422,22609724,22610859	22598329,22601755,22603762,22604079,22606533,22609910,22613215	Gene ID= ENSG00000100439.10 TPM= 4.34 Transcript Type= protein_coding
chr14	22598280	22612356	22598280	22612356	+	transcript231.chr14.nic@ABHD4	transcript231.chr14.nic	protein_coding	22598280,22601667,22603390,22603925,22606422,22609724,22610859	22598442,22601755,22603762,22604079,22606533,22609910,22612356	Gene ID= ENSG00000100439.10 TPM= 4.34 Transcript Type= NA
chr14	22766522	22771789	22766522	22771789	+	ENST00000285848.9@OXA1L	ENST00000285848.9	protein_coding	22766522,22767248,22767958,22769791,22770193,22770461,22770805,22771018,22771268,22771434	22766764,22767409,22768171,22769934,22770278,22770625,22770909,22771180,22771348,22771789	Gene ID= ENSG00000155463.12 TPM= 164.1 Transcript Type= protein_coding
chr14	22829878	22834347	22829878	22834347	+	transcript245.chr14.nic@MRPL52	transcript245.chr14.nic	protein_coding	22829878,22830050,22830187,22830964,22833418,22834172	22829940,22830110,22830254,22831037,22833482,22834347	Gene ID= ENSG00000172590.18 TPM= 4.83 Transcript Type= NA
chr14	22829887	22835037	22829887	22835037	+	ENST00000397496.7@MRPL52	ENST00000397496.7	protein_coding	22829887,22830053,22830187,22833418,22834172	22829940,22830110,22830254,22833482,22835037	Gene ID= ENSG00000172590.18 TPM= 28.96 Transcript Type= protein_coding
chr14	22829895	22834717	22829895	22834717	+	ENST00000555345.5@MRPL52	ENST00000555345.5	protein_coding	22829895,22830187,22833418,22834172	22830110,22830254,22833482,22834717	Gene ID= ENSG00000172590.18 TPM= 3.86 Transcript Type= protein_coding
chr14	22829921	22834347	22829921	22834347	+	ENST00000556840.5@MRPL52	ENST00000556840.5	protein_coding	22829921,22830050,22830187,22833418,22834172	22829948,22830110,22830254,22833482,22834347	Gene ID= ENSG00000172590.18 TPM= 32.82 Transcript Type= protein_coding
chr14	22829903	22834346	22829903	22834346	+	ENST00000432849.7@MRPL52	ENST00000432849.7	protein_coding	22829903,22830053,22830187,22833418,22834172	22829940,22830110,22830254,22833489,22834346	Gene ID= ENSG00000172590.18 TPM= 7.72 Transcript Type= protein_coding
chr14	22871744	22881580	22871744	22881580	+	transcript255.chr14.nnic@LRP10	transcript255.chr14.nnic	protein_coding	22871744,22872738,22873311,22875055,22875355,22876689,22876940,22879199	22872337,22872782,22873446,22875245,22876372,22876818,22877128,22881580	Gene ID= ENSG00000197324.8 TPM= 6.52 Transcript Type= NA
chr14	22871744	22878084	22871744	22878084	+	transcript256.chr14.nnic@LRP10	transcript256.chr14.nnic	protein_coding	22871744,22872738,22873311,22875055,22875331,22876689,22876940	22872337,22872782,22873446,22875245,22876372,22876818,22878084	Gene ID= ENSG00000197324.8 TPM= 19.55 Transcript Type= NA
chr14	22871613	22881580	22871613	22881580	+	ENST00000359591.8@LRP10	ENST00000359591.8	protein_coding	22871613,22872738,22873311,22875055,22875355,22876689,22876940	22872337,22872782,22873446,22875245,22876372,22876818,22881580	Gene ID= ENSG00000197324.8 TPM= 18.1 Transcript Type= protein_coding
chr14	22875136	22880392	22875136	22880392	+	ENST00000551466.1@LRP10	ENST00000551466.1	protein_coding	22875136,22875355,22876689,22876940,22879199	22875245,22876372,22876818,22877053,22880392	Gene ID= ENSG00000197324.8 TPM= 1.21 Transcript Type= protein_coding
chr14	22893206	22919184	22893206	22919184	-	ENST00000359890.7@RBM23	ENST00000359890.7	protein_coding	22918999,22911328,22909483,22908333,22906195,22905606,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22893206	22919184,22911403,22909595,22908380,22906368,22905659,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 3.86 Transcript Type= protein_coding
chr14	22900766	22919182	22900766	22919182	-	ENST00000399922.6@RBM23	ENST00000399922.6	protein_coding	22918999,22911328,22909483,22906195,22905606,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766	22919182,22911403,22909595,22906368,22905659,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 11.51 Transcript Type= protein_coding
chr14	22900766	22919162	22900766	22919162	-	transcript271.chr14.nic@RBM23	transcript271.chr14.nic	protein_coding	22918999,22911328,22909483,22908333,22906195,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766	22919162,22911403,22909595,22908380,22906368,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 5.71 Transcript Type= NA
chr14	22900766	22919162	22900766	22919162	-	transcript276.chr14.nic@RBM23	transcript276.chr14.nic	protein_coding	22918999,22911328,22906195,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766	22919162,22911403,22906368,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 3.78 Transcript Type= NA
chr14	22900777	22919178	22900777	22919178	-	ENST00000346528.9@RBM23	ENST00000346528.9	protein_coding	22918999,22911328,22909483,22906195,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900777	22919178,22911403,22909595,22906368,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 13.76 Transcript Type= protein_coding
chr14	22920529	22929401	22920529	22929401	-	transcript280.chr14.nic@PRMT5	transcript280.chr14.nic	protein_coding	22929252,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920840,22920529	22929401,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056,22920731	Gene ID= ENSG00000100462.15 TPM= 4.83 Transcript Type= NA
chr14	22920525	22929401	22920525	22929401	-	ENST00000397441.6@PRMT5	ENST00000397441.6	protein_coding	22929167,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920525	22929401,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056	Gene ID= ENSG00000100462.15 TPM= 9.25 Transcript Type= protein_coding
chr14	22920511	22929585	22920511	22929585	-	ENST00000324366.12@PRMT5	ENST00000324366.12	protein_coding	22929252,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920511	22929585,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056	Gene ID= ENSG00000100462.15 TPM= 72.96 Transcript Type= protein_coding
chr14	22920529	22929401	22920529	22929401	-	transcript290.chr14.nic@PRMT5	transcript290.chr14.nic	protein_coding	22929252,22928497,22928126,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920529	22929401,22928615,22928211,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056	Gene ID= ENSG00000100462.15 TPM= 6.35 Transcript Type= NA
chr14	22946228	22957149	22946228	22957149	-	transcript292.chr14.nic@HAUS4	transcript292.chr14.nic	protein_coding	22956746,22955100,22952541,22952328,22951555,22950314,22947868,22947601,22947171,22946228	22957149,22955176,22952683,22952459,22951689,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 7.24 Transcript Type= NA
chr14	22946229	22957142	22946229	22957142	-	ENST00000541587.5@HAUS4	ENST00000541587.5	protein_coding	22956916,22955100,22952541,22952328,22951555,22950314,22947868,22947601,22947171,22946229	22957142,22955176,22952683,22952459,22951689,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 10.14 Transcript Type= protein_coding
chr14	22946261	22957126	22946261	22957126	-	ENST00000555367.5@HAUS4	ENST00000555367.5	protein_coding	22956916,22955100,22952541,22952328,22950314,22947868,22947601,22947171,22946261	22957126,22955176,22952683,22952459,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 2.9 Transcript Type= protein_coding
chr14	22955665	22957090	22955665	22957090	-	transcript299.chr14.nnic@NA	transcript299.chr14.nnic	NA	22955665	22957090	Gene ID= novel_gene_chr14_300 TPM= 1.93 Transcript Type= NA
chr14	23025851	23035145	23025851	23035145	-	ENST00000361611.10@PSMB5	ENST00000361611.10	protein_coding	23034684,23033368,23025851	23035145,23033674,23026375	Gene ID= ENSG00000100804.18 TPM= 323.38 Transcript Type= protein_coding
chr14	23025858	23034894	23025858	23034894	-	ENST00000460922.2@PSMB5	ENST00000460922.2	protein_coding	23034684,23025858	23034894,23026375	Gene ID= ENSG00000100804.18 TPM= 11.58 Transcript Type= protein_coding
chr14	23025858	23034890	23025858	23034890	-	ENST00000493471.2@PSMB5	ENST00000493471.2	protein_coding	23034684,23033368,23027745,23025858	23034890,23033674,23027829,23026375	Gene ID= ENSG00000100804.18 TPM= 16.41 Transcript Type= protein_coding
chr14	23025902	23035230	23025902	23035230	-	ENST00000425762.2@PSMB5	ENST00000425762.2	protein_coding	23035112,23033368,23025902	23035230,23033674,23026375	Gene ID= ENSG00000100804.18 TPM= 2.9 Transcript Type= protein_coding
chr14	23058567	23095614	23058567	23095614	-	ENST00000457657.5@ACIN1	ENST00000457657.5	protein_coding	23094975,23093479,23090522,23081748,23079547,23078820,23078151,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567	23095614,23093544,23090633,23081836,23080809,23079038,23078266,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 7.08 Transcript Type= protein_coding
chr14	23059059	23095383	23059059	23095383	-	ENST00000555053.5@ACIN1	ENST00000555053.5	protein_coding	23094975,23093479,23090522,23089982,23081748,23079547,23078820,23078151,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23059059	23095383,23093544,23090633,23090101,23081836,23080809,23079038,23078266,23069617,23066008,23064485,23064221,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 1.28 Transcript Type= protein_coding
chr14	23058567	23071561	23058567	23071561	-	ENST00000338631.10@ACIN1	ENST00000338631.10	protein_coding	23071427,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567	23071561,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 9.97 Transcript Type= protein_coding
chr14	23064938	23066024	23064938	23066024	+	transcript326.chr14.nnic@NA	transcript326.chr14.nnic	NA	23064938	23066024	Gene ID= novel_gene_chr14_327 TPM= 1.93 Transcript Type= NA
chr14	23087444	23090995	23087444	23090995	-	transcript328.chr14.nnic@NA	transcript328.chr14.nnic	NA	23087444	23090995	Gene ID= novel_gene_chr14_329 TPM= 1.93 Transcript Type= NA
chr14	23094765	23100462	23094765	23100462	+	ENST00000319074.5@C14orf119	ENST00000319074.5	protein_coding	23094765,23097658	23095619,23100462	Gene ID= ENSG00000179933.5 TPM= 23.17 Transcript Type= protein_coding
chr14	23152607	23155017	23152607	23155017	+	transcript334.chr14.nnic@NA	transcript334.chr14.nnic	NA	23152607	23155017	Gene ID= novel_gene_chr14_335 TPM= 1.93 Transcript Type= NA
chr14	23272422	23286117	23272422	23286117	-	ENST00000357460.6@HOMEZ	ENST00000357460.6	protein_coding	23285913,23272422	23286117,23277187	Gene ID= ENSG00000215271.7 TPM= 2.9 Transcript Type= protein_coding
chr14	23285099	23286079	23285099	23286079	-	transcript338.chr14.nic@HOMEZ	transcript338.chr14.nic	protein_coding	23285913,23285099	23286079,23285611	Gene ID= ENSG00000215271.7 TPM= 4.83 Transcript Type= NA
chr14	23306762	23311759	23306762	23311759	+	ENST00000250405.9@BCL2L2	ENST00000250405.9	protein_coding	23306762,23307192,23307760,23308816	23306894,23307279,23308199,23311759	Gene ID= ENSG00000129473.9 TPM= 12.55 Transcript Type= protein_coding
chr14	23321289	23326185	23321289	23326185	+	ENST00000216727.8@PABPN1	ENST00000216727.8	protein_coding	23321289,23322181,23322999,23323377,23323965,23324138,23325247	23321820,23322295,23323066,23323483,23324052,23324289,23326185	Gene ID= ENSG00000100836.10 TPM= 31.37 Transcript Type= protein_coding
chr14	23321457	23326163	23321457	23326163	+	ENST00000397276.6@PABPN1	ENST00000397276.6	protein_coding	23321457,23322181,23322999,23323377,23323965,23324138	23321820,23322295,23323066,23323483,23324052,23326163	Gene ID= ENSG00000100836.10 TPM= 8.21 Transcript Type= protein_coding
chr14	23376373	23380119	23376373	23380119	-	transcript570.chr14.nnic@NA	transcript570.chr14.nnic	NA	23376373	23380119	Gene ID= novel_gene_chr14_571 TPM= 4.83 Transcript Type= NA
chr14	23381990	23408277	23381990	23408277	-	ENST00000405093.7@MYH6	ENST00000405093.7	protein_coding	23408253,23407576,23407023,23405627,23405223,23405100,23404711,23404296,23403715,23403348,23402697,23402464,23400709,23400256,23398728,23397543,23397170,23396963,23396694,23396284,23394068,23393666,23393342,23392912,23392562,23390057,23389593,23389393,23388859,23388155,23387758,23387529,23386315,23385928,23384916,23384442,23383225,23382428,23381990	23408277,23407608,23407236,23405770,23405379,23405127,23404822,23404388,23403778,23403446,23402800,23402602,23400977,23400426,23399037,23397613,23397257,23397080,23396817,23396420,23394323,23393908,23393518,23393057,23392652,23390446,23389719,23389511,23389055,23388338,23387923,23387653,23386623,23386131,23385041,23384717,23383320,23382562,23382063	Gene ID= ENSG00000197616.11 TPM= 417.53 Transcript Type= protein_coding
chr14	23412738	23435718	23412738	23435718	-	ENST00000355349.3@MYH7	ENST00000355349.3	protein_coding	23435620,23434194,23433532,23433084,23432639,23432479,23431761,23431585,23431418,23430901,23430560,23429775,23429229,23428955,23428500,23427585,23427240,23426777,23425964,23425695,23425282,23424769,23423907,23423547,23422180,23420958,23419845,23419483,23419177,23418210,23417503,23417153,23416868,23416004,23415629,23415381,23414995,23414007,23413759,23412738	23435718,23434249,23433740,23433227,23432795,23432506,23431869,23431677,23431481,23430999,23430663,23429913,23429347,23429104,23428670,23427894,23427307,23426864,23426081,23425818,23425418,23425024,23424149,23423723,23422325,23421048,23420234,23419609,23419295,23418406,23417686,23417318,23416992,23416312,23415832,23415506,23415270,23414102,23413893,23412871	Gene ID= ENSG00000092054.12 TPM= 3182.31 Transcript Type= protein_coding
chr14	23417931	23421487	23417931	23421487	+	transcript564.chr14.nnic@NA	transcript564.chr14.nnic	NA	23417931,23419923	23419603,23421487	Gene ID= novel_gene_chr14_565 TPM= 3.09 Transcript Type= NA
chr14	23469672	23478178	23469672	23478178	+	transcript579.chr14.nic@NGDN	transcript579.chr14.nic	protein_coding	23469672,23470042,23470906,23475171,23476029,23476239,23477200,23477503,23478007	23469727,23470101,23470977,23475308,23476152,23476407,23477356,23477560,23478178	Gene ID= ENSG00000129460.15 TPM= 8.21 Transcript Type= NA
chr14	23469688	23478193	23469688	23478193	+	ENST00000408901.7@NGDN	ENST00000408901.7	protein_coding	23469688,23470042,23470906,23475171,23475558,23475726,23476029,23476239,23477200,23477503,23478007	23469727,23470101,23470977,23475308,23475642,23475778,23476152,23476407,23477356,23477560,23478193	Gene ID= ENSG00000129460.15 TPM= 97.98 Transcript Type= protein_coding
chr14	23556055	23559578	23556055	23559578	+	transcript597.chr14.nnic@ZFHX2-AS1	transcript597.chr14.nnic	processed_transcript	23556055,23558695	23557228,23559578	Gene ID= ENSG00000157306.14 TPM= 2.25 Transcript Type= NA
chr14	23556003	23559578	23556003	23559578	+	transcript591.chr14.nnic@THTPA	transcript591.chr14.nnic	protein_coding	23556003,23556743,23558695	23556343,23557228,23559578	Gene ID= ENSG00000259431.5 TPM= 2.25 Transcript Type= NA
chr14	23556007	23559574	23556007	23559574	+	ENST00000404535.3@THTPA	ENST00000404535.3	protein_coding	23556007,23556743,23558695	23556343,23557304,23559574	Gene ID= ENSG00000259431.5 TPM= 6.11 Transcript Type= protein_coding
chr14	23556022	23560271	23556022	23560271	+	ENST00000288014.6@THTPA	ENST00000288014.6	protein_coding	23556022,23558695	23557304,23560271	Gene ID= ENSG00000259431.5 TPM= 5.79 Transcript Type= protein_coding
chr14	23556002	23559577	23556002	23559577	+	transcript600.chr14.nnic@NA	transcript600.chr14.nnic	NA	23556002	23559577	Gene ID= novel_gene_chr14_601 TPM= 1.93 Transcript Type= NA
chr14	23953586	23969274	23953586	23969274	+	ENST00000313250.9@DHRS4	ENST00000313250.9	protein_coding	23953586,23955035,23959902,23965762,23965932,23966283,23967211,23968757	23953916,23955212,23960003,23965832,23965983,23966417,23967266,23969274	Gene ID= ENSG00000157326.18 TPM= 13.03 Transcript Type= protein_coding
chr14	23953789	23969279	23953789	23969279	+	ENST00000558581.5@DHRS4	ENST00000558581.5	protein_coding	23953789,23955035,23965762,23965932,23966283,23967211,23968757	23953916,23955212,23965832,23965983,23966417,23967266,23969279	Gene ID= ENSG00000157326.18 TPM= 3.38 Transcript Type= protein_coding
chr14	23988818	24006408	23988818	24006408	+	ENST00000397071.5@DHRS4L2	ENST00000397071.5	protein_coding	23988818,23990182,23995032,24004337,24005886	23989075,23990359,23995133,24004392,24006408	Gene ID= ENSG00000187630.15 TPM= 13.03 Transcript Type= protein_coding
chr14	23988822	24006408	23988822	24006408	+	ENST00000335125.10@DHRS4L2	ENST00000335125.10	protein_coding	23988822,23990182,23995032,24000863,24001033,24001384,24004337,24005886	23989075,23990359,23995133,24000933,24001084,24001517,24004392,24006408	Gene ID= ENSG00000187630.15 TPM= 12.07 Transcript Type= protein_coding
chr14	24080877	24115020	24080877	24115020	-	transcript671.chr14.nic@NRL	transcript671.chr14.nic	protein_coding	24114722,24084520,24082468,24080877	24115020,24084745,24082875,24081568	Gene ID= ENSG00000129535.12 TPM= 2.9 Transcript Type= NA
chr14	24094138	24104130	24094138	24104130	+	ENST00000216780.8@PCK2	ENST00000216780.8	protein_coding	24094138,24096892,24098203,24098475,24099049,24099558,24099995,24102753,24103160,24103510	24094434,24097137,24098387,24098678,24099236,24099720,24100213,24102890,24103255,24104130	Gene ID= ENSG00000100889.11 TPM= 4.83 Transcript Type= protein_coding
chr14	24114627	24124029	24114627	24124029	+	ENST00000559115.5@DCAF11	ENST00000559115.5	protein_coding	24114627,24115543,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24114924,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 21.56 Transcript Type= protein_coding
chr14	24114780	24125240	24114780	24125240	+	ENST00000446197.7@DCAF11	ENST00000446197.7	protein_coding	24114780,24115382,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115293,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24125240	Gene ID= ENSG00000100897.17 TPM= 21.24 Transcript Type= protein_coding
chr14	24114811	24124029	24114811	24124029	+	transcript646.chr14.nic@DCAF11	transcript646.chr14.nic	protein_coding	24114811,24115543,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115293,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 3.21 Transcript Type= NA
chr14	24115275	24124029	24115275	24124029	+	ENST00000326009.9@DCAF11	ENST00000326009.9	protein_coding	24115275,24115382,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115293,24115726,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 8.04 Transcript Type= nonsense_mediated_decay
chr14	24131275	24132849	24131275	24132849	+	ENST00000267426.5@FITM1	ENST00000267426.5	protein_coding	24131275,24132211	24131829,24132849	Gene ID= ENSG00000139914.6 TPM= 143.83 Transcript Type= protein_coding
chr14	24136158	24138967	24136158	24138967	+	ENST00000206451.10@PSME1	ENST00000206451.10	protein_coding	24136158,24136985,24137143,24137321,24137520,24137700,24138049,24138196,24138345,24138474,24138736	24136301,24137017,24137205,24137431,24137565,24137797,24138117,24138263,24138399,24138560,24138967	Gene ID= ENSG00000092010.14 TPM= 124.04 Transcript Type= protein_coding
chr14	24136200	24138964	24136200	24138964	+	ENST00000382708.7@PSME1	ENST00000382708.7	protein_coding	24136200,24136985,24137143,24137321,24137520,24137700,24138049,24138196,24138345,24138474	24136301,24137017,24137205,24137431,24137565,24137797,24138117,24138263,24138399,24138964	Gene ID= ENSG00000092010.14 TPM= 1.45 Transcript Type= protein_coding
chr14	24138965	24141591	24138965	24141591	-	transcript672.chr14.nic@EMC9	transcript672.chr14.nic	protein_coding	24140889,24139545,24139360,24138965	24141591,24139789,24139454,24139196	Gene ID= ENSG00000100908.13 TPM= 1.93 Transcript Type= NA
chr14	24138965	24141588	24138965	24141588	-	ENST00000216799.8@EMC9	ENST00000216799.8	protein_coding	24141438,24141107,24140889,24139545,24139360,24138965	24141588,24141316,24140965,24139614,24139454,24139196	Gene ID= ENSG00000100908.13 TPM= 6.27 Transcript Type= protein_coding
chr14	24138965	24141585	24138965	24141585	-	ENST00000419198.6@EMC9	ENST00000419198.6	protein_coding	24141107,24140889,24139545,24139360,24138965	24141585,24140965,24139614,24139454,24139196	Gene ID= ENSG00000100908.13 TPM= 17.86 Transcript Type= protein_coding
chr14	24138965	24141570	24138965	24141570	-	ENST00000560403.5@EMC9	ENST00000560403.5	protein_coding	24141348,24140889,24139545,24139360,24138965	24141570,24140965,24139789,24139454,24139196	Gene ID= ENSG00000100908.13 TPM= 1.93 Transcript Type= protein_coding
chr14	24143365	24147256	24143365	24147256	-	transcript661.chr14.nic@PSME2	transcript661.chr14.nic	protein_coding	24146534,24145710,24145379,24145243,24145058,24144400,24144192,24143975,24143585,24143365	24147256,24146240,24145465,24145273,24145155,24144468,24144259,24144029,24143671,24143489	Gene ID= ENSG00000100911.15 TPM= 2.9 Transcript Type= NA
chr14	24147510	24160655	24147510	24160655	+	transcript622.chr14.nnic@RNF31	transcript622.chr14.nnic	protein_coding	24147510,24147976,24148258,24148642,24148801,24149406,24150061,24150598,24151131,24151485,24151786,24155157,24155414,24155603,24157290,24157520,24157832,24158142,24159864,24160239,24160520	24147890,24148122,24148413,24148701,24148876,24149583,24150448,24150888,24151379,24151670,24151992,24155330,24155512,24155692,24157404,24157638,24158011,24158199,24159960,24160407,24160655	Gene ID= ENSG00000092098.16 TPM= 8.52 Transcript Type= NA
chr14	24147510	24160655	24147510	24160655	+	transcript625.chr14.nnic@RNF31	transcript625.chr14.nnic	protein_coding	24147510,24147976,24148258,24148642,24148801,24149406,24150061,24150598,24151182,24151485,24151786,24155157,24155414,24155603,24157290,24157520,24157898,24158142,24159864,24160239,24160520	24147890,24148122,24148413,24148701,24148876,24149583,24150448,24150888,24151379,24151670,24151992,24155330,24155512,24155692,24157404,24157638,24158011,24158199,24159960,24160407,24160655	Gene ID= ENSG00000092098.16 TPM= 12.87 Transcript Type= NA
chr14	24147510	24160655	24147510	24160655	+	transcript634.chr14.nic@RNF31	transcript634.chr14.nic	protein_coding	24147510,24147976,24148258,24148642,24148801,24149406,24150061,24150598,24151131,24151485,24151786,24155157,24155414,24155603,24157290,24157520,24157898,24158142,24160239,24160520	24147890,24148122,24148413,24148701,24148876,24149583,24150448,24150888,24151379,24151670,24151992,24155330,24155512,24155692,24157404,24157638,24158011,24158199,24160407,24160655	Gene ID= ENSG00000092098.16 TPM= 5.63 Transcript Type= NA
chr14	24180219	24188964	24180219	24188964	-	ENST00000354464.10@IPO4	ENST00000354464.10	protein_coding	24188719,24188552,24188344,24188216,24187667,24187400,24187085,24186878,24186708,24186287,24186129,24185861,24185459,24185183,24184867,24184650,24184298,24183998,24183783,24183590,24183456,24183250,24182976,24182792,24182278,24181955,24181711,24181513,24180689,24180219	24188964,24188638,24188423,24188257,24187796,24187579,24187150,24186979,24186791,24186451,24186182,24185970,24185567,24185312,24184980,24184763,24184418,24184109,24183898,24183667,24183513,24183355,24183169,24182842,24182403,24182163,24181843,24181617,24180758,24180572	Gene ID= ENSG00000196497.16 TPM= 55.82 Transcript Type= protein_coding
chr14	24180226	24188815	24180226	24188815	-	transcript682.chr14.nnic@AL136295.4	transcript682.chr14.nnic	protein_coding	24188719,24188552,24188344,24188216,24187667,24187400,24187085,24186878,24186708,24186287,24186129,24185861,24185459,24185183,24184867,24184650,24184298,24183998,24183783,24183590,24183456,24183250,24182976,24182278,24181955,24181711,24181513,24180689,24180226	24188815,24188638,24188423,24188257,24187796,24187579,24187150,24186979,24186791,24186451,24186182,24185970,24185567,24185312,24184980,24184763,24184418,24184109,24183898,24183667,24183513,24183355,24183169,24182403,24182163,24181843,24181617,24180758,24180572	Gene ID= ENSG00000259522.3 TPM= 15.44 Transcript Type= NA
chr14	24189143	24195599	24189143	24195599	-	transcript688.chr14.nic@TM9SF1	transcript688.chr14.nic	protein_coding	24195309,24194675,24192648,24192171,24190380,24189143	24195599,24195036,24193269,24192356,24190653,24189808	Gene ID= ENSG00000100926.14 TPM= 5.63 Transcript Type= NA
chr14	24189143	24195687	24189143	24195687	-	ENST00000261789.8@TM9SF1	ENST00000261789.8	protein_coding	24195346,24194675,24192648,24192171,24190380,24189143	24195687,24195036,24193269,24192356,24190653,24189808	Gene ID= ENSG00000100926.14 TPM= 39.41 Transcript Type= protein_coding
chr14	24190852	24195687	24190852	24195687	-	transcript701.chr14.nic@TM9SF1	transcript701.chr14.nic	protein_coding	24195346,24194675,24190852	24195687,24195036,24193269	Gene ID= ENSG00000100926.14 TPM= 1.93 Transcript Type= NA
chr14	24189143	24195656	24189143	24195656	-	transcript693.chr14.nnic@AL136295.1	transcript693.chr14.nnic	protein_coding	24195346,24192648,24192171,24190380,24189143	24195656,24193269,24192356,24190653,24189808	Gene ID= ENSG00000254692.1 TPM= 4.18 Transcript Type= NA
chr14	24198433	24199090	24198433	24199090	+	ENST00000610486.1@AL136295.6	ENST00000610486.1	lincRNA	24198433	24199090	Gene ID= ENSG00000276698.1 TPM= 1.93 Transcript Type= lincRNA
chr14	24209583	24213869	24209583	24213869	-	ENST00000347519.10@CHMP4A	ENST00000347519.10	protein_coding	24213409,24211680,24211415,24210654,24210348,24209583	24213869,24211829,24211592,24210768,24210483,24209935	Gene ID= ENSG00000254505.9 TPM= 22.2 Transcript Type= protein_coding
chr14	24209860	24213488	24209860	24213488	-	ENST00000609024.5@CHMP4A	ENST00000609024.5	protein_coding	24213409,24211680,24211415,24210654,24210348,24209860	24213488,24211829,24211592,24210768,24210483,24209935	Gene ID= ENSG00000254505.9 TPM= 1.93 Transcript Type= protein_coding
chr14	24213937	24216067	24213937	24216067	-	ENST00000288087.11@MDP1	ENST00000288087.11	protein_coding	24215919,24215737,24215552,24214492,24214310,24213937	24216067,24215797,24215662,24214599,24214395,24214151	Gene ID= ENSG00000213920.8 TPM= 9.65 Transcript Type= protein_coding
chr14	24216852	24232454	24216852	24232454	-	ENST00000250495.9@NEDD8	ENST00000250495.9	protein_coding	24232250,24218384,24218133,24216852	24232454,24218431,24218215,24217223	Gene ID= ENSG00000129559.12 TPM= 88.81 Transcript Type= protein_coding
chr14	24216866	24232325	24216866	24232325	-	ENST00000531430.5@NEDD8	ENST00000531430.5	protein_coding	24232250,24231652,24218384,24218133,24216866	24232325,24231737,24218431,24218215,24217223	Gene ID= ENSG00000129559.12 TPM= 3.86 Transcript Type= processed_transcript
chr14	24216857	24232303	24216857	24232303	-	ENST00000396828.8@NEDD8	ENST00000396828.8	protein_coding	24232250,24218384,24218059,24216857	24232303,24218431,24218215,24217223	Gene ID= ENSG00000129559.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr14	24232637	24239242	24232637	24239242	+	transcript723.chr14.nic@GMPR2	transcript723.chr14.nic	protein_coding	24232637,24233219,24233479,24234107,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232788,24233340,24233598,24234241,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 2.12 Transcript Type= NA
chr14	24232442	24239242	24232442	24239242	+	ENST00000559836.5@GMPR2	ENST00000559836.5	protein_coding	24232442,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232788,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 11.46 Transcript Type= protein_coding
chr14	24232885	24239242	24232885	24239242	+	transcript729.chr14.nic@GMPR2	transcript729.chr14.nic	protein_coding	24232885,24233479,24234107,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24233340,24233598,24234241,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 2.12 Transcript Type= NA
chr14	24232872	24239242	24232872	24239242	+	ENST00000399440.6@GMPR2	ENST00000399440.6	protein_coding	24232872,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232977,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 7.6 Transcript Type= protein_coding
chr14	24232901	24239242	24232901	24239242	+	ENST00000420554.6@GMPR2	ENST00000420554.6	protein_coding	24232901,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 4.7 Transcript Type= protein_coding
chr14	24239643	24242663	24239643	24242663	-	transcript745.chr14.nic@TINF2	transcript745.chr14.nic	protein_coding	24242141,24241675,24241204,24241020,24239643	24242663,24241776,24241311,24241116,24240875	Gene ID= ENSG00000092330.15 TPM= 13.87 Transcript Type= NA
chr14	24239643	24242656	24239643	24242656	-	transcript748.chr14.nnic@TINF2	transcript748.chr14.nnic	protein_coding	24242141,24241020,24239643	24242656,24241116,24240875	Gene ID= ENSG00000092330.15 TPM= 3.25 Transcript Type= NA
chr14	24239682	24242663	24239682	24242663	-	transcript749.chr14.nic@TINF2	transcript749.chr14.nic	protein_coding	24242141,24241675,24239682	24242663,24241776,24240875	Gene ID= ENSG00000092330.15 TPM= 2.9 Transcript Type= NA
chr14	24239643	24242663	24239643	24242663	-	ENST00000399423.8@TINF2	ENST00000399423.8	protein_coding	24242141,24241890,24241675,24241204,24241020,24239643	24242663,24241994,24241776,24241311,24241116,24240875	Gene ID= ENSG00000092330.15 TPM= 77.58 Transcript Type= protein_coding
chr14	24239643	24242674	24239643	24242674	-	ENST00000267415.11@TINF2	ENST00000267415.11	protein_coding	24242141,24241890,24241675,24241204,24241020,24240419,24240263,24240064,24239643	24242674,24241994,24241776,24241311,24241116,24240875,24240330,24240155,24239931	Gene ID= ENSG00000092330.15 TPM= 7.89 Transcript Type= protein_coding
chr14	24265538	24271538	24265538	24271538	-	transcript752.chr14.nic@RABGGTA	transcript752.chr14.nic	protein_coding	24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538	24271538,24271248,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 5.31 Transcript Type= NA
chr14	24265538	24271599	24265538	24271599	-	ENST00000399409.7@RABGGTA	ENST00000399409.7	protein_coding	24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538	24271599,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 8.21 Transcript Type= protein_coding
chr14	24265556	24271549	24265556	24271549	-	ENST00000559974.5@RABGGTA	ENST00000559974.5	protein_coding	24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267866,24267660,24266776,24266430,24265556	24271549,24271248,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr14	24305187	24311422	24305187	24311422	-	ENST00000258807.5@CIDEB	ENST00000258807.5	protein_coding	24310649,24308479,24307818,24307371,24306374,24305947,24305187	24311422,24308830,24307920,24307515,24306523,24306137,24305765	Gene ID= ENSG00000136305.11 TPM= 1.93 Transcript Type= protein_coding
chr14	24318364	24335071	24318364	24335071	-	ENST00000554068.6@ADCY4	ENST00000554068.6	protein_coding	24334984,24334494,24332791,24332522,24331788,24331208,24331018,24330168,24329860,24329401,24329061,24326299,24326079,24325818,24325377,24324307,24324062,24323344,24322904,24322624,24322066,24319742,24319329,24319098,24318654,24318364	24335071,24334682,24332988,24332683,24331937,24331356,24331129,24330295,24330018,24329533,24329234,24326342,24326165,24325887,24325474,24324391,24324199,24323454,24323088,24322708,24322224,24319888,24319436,24319212,24318778,24318568	Gene ID= ENSG00000129467.13 TPM= 3.86 Transcript Type= protein_coding
chr14	24336021	24340045	24336021	24340045	-	ENST00000216274.9@RIPK3	ENST00000216274.9	protein_coding	24339807,24339457,24339015,24338422,24338249,24337873,24337695,24337086,24336885,24336021	24340045,24339597,24339324,24338567,24338295,24338040,24337762,24337460,24336945,24336395	Gene ID= ENSG00000129465.15 TPM= 1.93 Transcript Type= protein_coding
chr14	24429971	24438408	24429971	24438408	+	transcript784.chr14.nic@KHNYN	transcript784.chr14.nic	protein_coding	24429971,24431463,24432722,24432936,24436072,24436388,24437036	24430931,24432610,24432852,24433032,24436179,24436489,24438408	Gene ID= ENSG00000100441.9 TPM= 3.38 Transcript Type= NA
chr14	24429938	24438408	24429938	24438408	+	ENST00000553935.5@KHNYN	ENST00000553935.5	protein_coding	24429938,24430714,24431463,24432722,24432936,24436072,24436388,24437036	24430119,24430931,24432610,24432852,24433032,24436179,24436489,24438408	Gene ID= ENSG00000100441.9 TPM= 30.41 Transcript Type= protein_coding
chr14	24439766	24442755	24439766	24442755	-	transcript796.chr14.nnic@NA	transcript796.chr14.nnic	NA	24439766	24442755	Gene ID= novel_gene_chr14_797 TPM= 4.83 Transcript Type= NA
chr14	24439766	24442801	24439766	24442801	-	transcript785.chr14.nic@SDR39U1	transcript785.chr14.nic	protein_coding	24442754,24442346,24442098,24441674,24440783,24439766	24442801,24442452,24442260,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 8.72 Transcript Type= NA
chr14	24439766	24442803	24439766	24442803	-	ENST00000399395.7@SDR39U1	ENST00000399395.7	protein_coding	24442754,24442346,24442178,24441674,24440783,24439766	24442803,24442452,24442260,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 31.88 Transcript Type= protein_coding
chr14	24439766	24442776	24439766	24442776	-	ENST00000544691.6@SDR39U1	ENST00000544691.6	protein_coding	24442346,24442178,24441674,24440783,24439766	24442776,24442260,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 10.98 Transcript Type= retained_intron
chr14	24439766	24442801	24439766	24442801	-	transcript791.chr14.nic@SDR39U1	transcript791.chr14.nic	protein_coding	24442754,24442346,24442178,24440783,24439766	24442801,24442452,24442260,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 8.52 Transcript Type= NA
chr14	24439766	24442741	24439766	24442741	-	transcript792.chr14.nic@SDR39U1	transcript792.chr14.nic	protein_coding	24442098,24441674,24440783,24439766	24442741,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 8.88 Transcript Type= NA
chr14	24439780	24442776	24439780	24442776	-	ENST00000556262.5@SDR39U1	ENST00000556262.5	protein_coding	24441674,24440783,24439780	24442776,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 5.15 Transcript Type= retained_intron
chr14	24439782	24442448	24439782	24442448	-	ENST00000538105.6@SDR39U1	ENST00000538105.6	protein_coding	24442346,24442178,24440783,24439782	24442448,24442260,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 3.06 Transcript Type= protein_coding
chr14	30622112	30735812	30622112	30735812	+	ENST00000458591.6@SCFD1	ENST00000458591.6	protein_coding	30622112,30628209,30630477,30633947,30638125,30639777,30643316,30649528,30650565,30653489,30670256,30673257,30673924,30674984,30694773,30700188,30702296,30705823,30707990,30715924,30719325,30721884,30722494,30734790,30735586	30622399,30628279,30630565,30634037,30638247,30639864,30643405,30649583,30650650,30653588,30670395,30673347,30673997,30675065,30694869,30700258,30702375,30705885,30708065,30715977,30719377,30721917,30722559,30734858,30735812	Gene ID= ENSG00000092108.20 TPM= 19.31 Transcript Type= protein_coding
chr14	30622304	30735799	30622304	30735799	+	transcript808.chr14.nic@SCFD1	transcript808.chr14.nic	protein_coding	30622304,30628209,30630477,30633947,30638125,30639777,30643316,30649528,30650565,30653489,30670256,30673257,30673924,30674984,30694773,30700188,30702296,30705823,30707990,30715924,30719325,30721884,30722494,30734790,30735586	30622462,30628279,30630565,30634037,30638247,30639864,30643405,30649583,30650650,30653588,30670395,30673347,30673997,30675065,30694869,30700258,30702375,30705885,30708065,30715977,30719377,30721917,30722559,30734858,30735799	Gene ID= ENSG00000092108.20 TPM= 3.38 Transcript Type= NA
chr14	30622319	30735789	30622319	30735789	+	ENST00000544052.6@SCFD1	ENST00000544052.6	protein_coding	30622319,30630477,30633947,30638125,30639777,30643316,30649528,30650565,30653489,30670256,30673257,30673924,30674984,30694773,30700188,30702296,30705823,30707990,30715924,30719325,30721884,30722494,30734790,30735586	30622399,30630565,30634037,30638247,30639864,30643405,30649583,30650650,30653588,30670395,30673347,30673997,30675065,30694869,30700258,30702375,30705885,30708065,30715977,30719377,30721917,30722559,30734858,30735789	Gene ID= ENSG00000092108.20 TPM= 7.24 Transcript Type= protein_coding
chr14	30893799	31026401	30893799	31026401	-	ENST00000355683.9@STRN3	ENST00000355683.9	protein_coding	31025904,30956139,30955620,30950863,30947090,30936495,30935163,30913524,30912007,30911777,30911041,30906877,30905418,30902536,30895662,30893799	31026401,30956242,30955693,30950944,30947263,30936624,30935304,30913657,30912182,30911824,30911162,30907044,30905558,30902643,30895748,30895580	Gene ID= ENSG00000196792.11 TPM= 57.92 Transcript Type= protein_coding
chr14	31100118	31207679	31100118	31207679	-	transcript847.chr14.nnic@HECTD1	transcript847.chr14.nnic	protein_coding	31207391,31205797,31178020,31174911,31173525,31173156,31172046,31171861,31169354,31168298,31157165,31156840,31149999,31148897,31148721,31144807,31144111,31141858,31139892,31136531,31135476,31134872,31133509,31133238,31127785,31122920,31121383,31119710,31116236,31114286,31113277,31113104,31112416,31109397,31107567,31106646,31105590,31105383,31102916,31101180,31100118	31207679,31205957,31178254,31175138,31173806,31173426,31172122,31171959,31169468,31168472,31157303,31157010,31150221,31149160,31148797,31144941,31144257,31141952,31139997,31136665,31135615,31135195,31133675,31133414,31128006,31123047,31121505,31119866,31116458,31114340,31113484,31113189,31112543,31109598,31107704,31107253,31105668,31105476,31103066,31101324,31101067	Gene ID= ENSG00000092148.12 TPM= 37.22 Transcript Type= NA
chr14	31100118	31207804	31100118	31207804	-	ENST00000553700.5@HECTD1	ENST00000553700.5	protein_coding	31207391,31205797,31178020,31174911,31173525,31173156,31172046,31171861,31169354,31168298,31157165,31156840,31149999,31148897,31148721,31144807,31144111,31141858,31139892,31136531,31135476,31134872,31133509,31133238,31128612,31127785,31122914,31121383,31119710,31116236,31114286,31113877,31113277,31113104,31112416,31109397,31107567,31106646,31105590,31105383,31102916,31101180,31100118	31207804,31205957,31178254,31175138,31173806,31173426,31172122,31171959,31169468,31168472,31157303,31157010,31150221,31149160,31148797,31144941,31144257,31141952,31139997,31136665,31135615,31135195,31133675,31133414,31129448,31128006,31123047,31121505,31119866,31116458,31114340,31114059,31113484,31113189,31112543,31109598,31107704,31107253,31105668,31105476,31103066,31101324,31101067	Gene ID= ENSG00000092148.12 TPM= 24.19 Transcript Type= protein_coding
chr14	31114311	31208175	31114311	31208175	-	transcript851.chr14.nic@HECTD1	transcript851.chr14.nic	protein_coding	31207016,31205797,31178020,31174911,31173525,31173156,31172046,31171861,31169354,31168298,31157165,31156840,31149999,31148897,31148721,31144807,31144111,31141858,31139892,31136531,31135476,31134872,31133509,31133238,31128612,31127785,31122920,31121383,31119710,31116236,31114311	31208175,31205957,31178254,31175138,31173806,31173426,31172122,31171959,31169468,31168472,31157303,31157010,31150221,31149160,31148797,31144941,31144257,31141952,31139997,31136665,31135615,31135195,31133675,31133414,31129448,31128006,31123047,31121505,31119866,31116458,31114340	Gene ID= ENSG00000092148.12 TPM= 8.7 Transcript Type= NA
chr14	31400266	31420531	31400266	31420531	-	ENST00000382464.6@HEATR5A	ENST00000382464.6	protein_coding	31420472,31402850,31400266	31420531,31403049,31400512	Gene ID= ENSG00000129493.14 TPM= 1.93 Transcript Type= protein_coding
chr14	31561395	31861224	31561395	31861224	+	ENST00000281081.11@NUBPL	ENST00000281081.11	protein_coding	31561395,31562068,31565014,31599289,31673355,31673484,31787780,31826629,31846471,31850119,31859118	31561547,31562215,31565048,31599379,31673394,31673574,31787873,31826714,31846591,31850201,31861224	Gene ID= ENSG00000151413.16 TPM= 6.76 Transcript Type= protein_coding
chr14	32077289	32159728	32077289	32159728	+	ENST00000345122.7@ARHGAP5	ENST00000345122.7	protein_coding	32077289,32090502,32117140,32146263,32149902,32152423,32154621	32077435,32094386,32117287,32146340,32150033,32152528,32159728	Gene ID= ENSG00000100852.12 TPM= 3.86 Transcript Type= protein_coding
chr14	32495054	32830806	32495054	32830806	+	transcript897.chr14.nic@AKAP6	transcript897.chr14.nic	protein_coding	32495054,32535554,32545230,32577120,32599410,32600629,32678311,32695990,32732454,32735658,32773678,32821402,32829848	32495404,32535805,32546999,32577242,32599506,32600792,32678459,32696110,32732600,32735882,32773893,32824815,32830806	Gene ID= ENSG00000151320.10 TPM= 14.96 Transcript Type= NA
chr14	32495054	32733162	32495054	32733162	+	transcript901.chr14.nic@AKAP6	transcript901.chr14.nic	protein_coding	32495054,32535554,32545230,32577120,32599410,32600629,32678311,32695990,32732454	32495404,32535805,32546999,32577242,32599506,32600792,32678459,32696110,32733162	Gene ID= ENSG00000151320.10 TPM= 5.31 Transcript Type= NA
chr14	32938874	32940062	32938874	32940062	+	transcript903.chr14.nnic@NA	transcript903.chr14.nnic	NA	32938874	32940062	Gene ID= novel_gene_chr14_904 TPM= 1.93 Transcript Type= NA
chr14	33924231	33951081	33924231	33951081	-	ENST00000250457.7@EGLN3	ENST00000250457.7	protein_coding	33950396,33931096,33929076,33926960,33924231	33951081,33931215,33929212,33927033,33925922	Gene ID= ENSG00000129521.13 TPM= 2.9 Transcript Type= protein_coding
chr14	34432946	34433840	34432946	34433840	-	transcript910.chr14.nnic@NA	transcript910.chr14.nnic	NA	34432946	34433840	Gene ID= novel_gene_chr14_911 TPM= 1.93 Transcript Type= NA
chr14	34516013	34539758	34516013	34539758	-	transcript916.chr14.nnic@EAPP	transcript916.chr14.nnic	protein_coding	34539555,34536094,34533444,34524697,34516013	34539758,34536275,34533539,34524807,34516586	Gene ID= ENSG00000129518.8 TPM= 2.9 Transcript Type= NA
chr14	34515929	34539710	34515929	34539710	-	ENST00000250454.7@EAPP	ENST00000250454.7	protein_coding	34539555,34536094,34533444,34529358,34524697,34515929	34539710,34536275,34533539,34529475,34524807,34516586	Gene ID= ENSG00000129518.8 TPM= 5.79 Transcript Type= protein_coding
chr14	34562409	34630183	34562409	34630183	-	ENST00000362031.8@SNX6	ENST00000362031.8	protein_coding	34630111,34629907,34609638,34608030,34605596,34603348,34597550,34593045,34586230,34581561,34575756,34567854,34567686,34562409	34630183,34629954,34609742,34608140,34605717,34603471,34597645,34593150,34586305,34581600,34575842,34568013,34567771,34563175	Gene ID= ENSG00000129515.18 TPM= 78.19 Transcript Type= protein_coding
chr14	34712008	34714696	34712008	34714696	-	transcript945.chr14.nnic@CFL2	transcript945.chr14.nnic	protein_coding	34714538,34713674,34713254,34713060,34712008	34714696,34713904,34713561,34713136,34712977	Gene ID= ENSG00000165410.14 TPM= 36.2 Transcript Type= NA
chr14	34712008	34714823	34712008	34714823	-	ENST00000554470.5@CFL2	ENST00000554470.5	protein_coding	34714538,34713508,34713060,34712008	34714823,34713561,34713136,34712977	Gene ID= ENSG00000165410.14 TPM= 9.17 Transcript Type= nonsense_mediated_decay
chr14	34706769	34714690	34706769	34714690	-	ENST00000298159.10@CFL2	ENST00000298159.10	protein_coding	34714538,34713254,34713060,34706769	34714690,34713561,34713136,34712977	Gene ID= ENSG00000165410.14 TPM= 44.4 Transcript Type= protein_coding
chr14	34710387	34713828	34710387	34713828	-	ENST00000341223.7@CFL2	ENST00000341223.7	protein_coding	34713674,34713254,34713060,34710387	34713828,34713561,34713136,34712977	Gene ID= ENSG00000165410.14 TPM= 7.72 Transcript Type= protein_coding
chr14	34712037	34714577	34712037	34714577	-	ENST00000422678.2@CFL2	ENST00000422678.2	protein_coding	34714538,34713397,34713060,34712037	34714577,34713561,34713136,34712977	Gene ID= ENSG00000165410.14 TPM= 2.25 Transcript Type= nonsense_mediated_decay
chr14	34752731	34875647	34752731	34875647	-	ENST00000358716.8@BAZ1A	ENST00000358716.8	protein_coding	34875138,34874492,34862044,34826013,34810935,34807451,34802854,34801094,34800224,34795670,34794749,34792775,34785777,34783762,34783119,34780186,34775919,34774327,34773572,34771511,34765021,34764707,34761757,34758704,34754827,34752731	34875647,34874662,34862322,34826156,34811036,34807538,34802988,34801193,34800390,34795765,34794887,34792921,34786001,34783927,34783232,34780310,34776515,34774490,34773726,34771659,34765268,34764933,34762223,34758846,34754914,34753704	Gene ID= ENSG00000198604.10 TPM= 2.9 Transcript Type= protein_coding
chr14	34800260	34874894	34800260	34874894	-	transcript965.chr14.nnic@BAZ1A	transcript965.chr14.nnic	protein_coding	34874869,34874492,34862044,34826013,34810935,34807451,34802854,34801094,34800260	34874894,34874662,34862322,34826156,34811036,34807538,34802988,34801193,34800390	Gene ID= ENSG00000198604.10 TPM= 3.38 Transcript Type= NA
chr14	34800260	34875356	34800260	34875356	-	transcript966.chr14.nic@BAZ1A	transcript966.chr14.nic	protein_coding	34875138,34874492,34862044,34826013,34810935,34807451,34802854,34801094,34800260	34875356,34874662,34862322,34826156,34811036,34807538,34802988,34801193,34800390	Gene ID= ENSG00000198604.10 TPM= 2.41 Transcript Type= NA
chr14	34874343	34876459	34874343	34876459	+	ENST00000557373.1@AL121603.2	ENST00000557373.1	antisense_RNA	34874343	34876459	Gene ID= ENSG00000258738.1 TPM= 4.83 Transcript Type= antisense_RNA
chr14	35046295	35081722	35046295	35081722	+	transcript994.chr14.nnic@FAM177A1	transcript994.chr14.nnic	protein_coding	35046295,35046505,35077150,35078927,35081022	35046406,35046632,35077216,35079024,35081722	Gene ID= ENSG00000151327.12 TPM= 1.93 Transcript Type= NA
chr14	35046243	35050396	35046243	35050396	+	transcript1000.chr14.nic@FAM177A1	transcript1000.chr14.nic	protein_coding	35046243,35046505,35050033	35046406,35046628,35050396	Gene ID= ENSG00000151327.12 TPM= 5.79 Transcript Type= NA
chr14	35046403	35083383	35046403	35083383	+	ENST00000280987.8@FAM177A1	ENST00000280987.8	protein_coding	35046403,35053278,35077150,35078927,35081022	35046628,35053451,35077216,35079024,35083383	Gene ID= ENSG00000151327.12 TPM= 8.69 Transcript Type= protein_coding
chr14	35046453	35050396	35046453	35050396	+	ENST00000554052.2@FAM177A1	ENST00000554052.2	protein_coding	35046453,35050033	35046628,35050396	Gene ID= ENSG00000151327.12 TPM= 1.93 Transcript Type= protein_coding
chr14	35085467	35122313	35085467	35122313	-	ENST00000261475.9@PPP2R3C	ENST00000261475.9	protein_coding	35121902,35116610,35110525,35109819,35108139,35107304,35099252,35096709,35096558,35095048,35091070,35087951,35085467	35122313,35116737,35110629,35109931,35108236,35107374,35099384,35096764,35096633,35095184,35091207,35088010,35085778	Gene ID= ENSG00000092020.10 TPM= 14.48 Transcript Type= protein_coding
chr14	35122545	35274065	35122545	35274065	+	transcript985.chr14.nic@KIAA0391	transcript985.chr14.nic	protein_coding	35122545,35122952,35126735,35127479,35180670,35266727,35270401,35273435	35122767,35124231,35126782,35127611,35180777,35266875,35270596,35274065	Gene ID= ENSG00000100890.15 TPM= 1.93 Transcript Type= NA
chr14	35122570	35274065	35122570	35274065	+	ENST00000534898.8@KIAA0391	ENST00000534898.8	protein_coding	35122570,35122952,35126735,35127479,35180670,35266727,35270401,35273435	35122635,35124231,35126782,35127611,35180777,35266875,35270596,35274065	Gene ID= ENSG00000100890.15 TPM= 8.69 Transcript Type= protein_coding
chr14	35122549	35317474	35122549	35317474	+	ENST00000557565.1@AL121594.3	ENST00000557565.1	protein_coding	35122549,35122952,35126735,35127479,35180670,35266727,35270401,35273435,35278553,35307994,35308914,35310740,35312881,35314361,35317249	35122635,35124231,35126782,35127611,35180777,35266875,35270596,35274291,35278718,35308088,35308995,35310895,35313059,35314455,35317474	Gene ID= ENSG00000258790.1 TPM= 7.72 Transcript Type= nonsense_mediated_decay
chr14	35292317	35317478	35292317	35317478	+	ENST00000622405.4@PSMA6	ENST00000622405.4	protein_coding	35292317,35308914,35310740,35312881,35314361,35317249	35292552,35308995,35310895,35313059,35314455,35317478	Gene ID= ENSG00000100902.10 TPM= 4.83 Transcript Type= protein_coding
chr14	35292357	35317474	35292357	35317474	+	ENST00000261479.8@PSMA6	ENST00000261479.8	protein_coding	35292357,35307994,35308914,35310740,35312881,35314361,35317249	35292552,35308088,35308995,35310895,35313059,35314455,35317474	Gene ID= ENSG00000100902.10 TPM= 308.9 Transcript Type= protein_coding
chr14	35396969	35398189	35396969	35398189	-	transcript1010.chr14.nnic@NA	transcript1010.chr14.nnic	NA	35396969	35398189	Gene ID= novel_gene_chr14_1011 TPM= 1.93 Transcript Type= NA
chr14	35401511	35404746	35401511	35404746	-	ENST00000216797.9@NFKBIA	ENST00000216797.9	protein_coding	35404418,35403690,35403150,35402771,35402394,35401511	35404746,35403798,35403360,35402859,35402663,35402060	Gene ID= ENSG00000100906.10 TPM= 42.47 Transcript Type= protein_coding
chr14	35401540	35404746	35401540	35404746	-	ENST00000557140.5@NFKBIA	ENST00000557140.5	protein_coding	35404418,35403690,35403150,35402771,35402394,35401540	35404746,35403798,35403360,35402859,35402534,35402060	Gene ID= ENSG00000100906.10 TPM= 1.93 Transcript Type= protein_coding
chr14	35538352	35809226	35538352	35809226	-	ENST00000389698.7@RALGAPA1	ENST00000389698.7	protein_coding	35808730,35775635,35775006,35770942,35762710,35760829,35756793,35752024,35750482,35748585,35742368,35738513,35728362,35725024,35723027,35721688,35689836,35686542,35684929,35683809,35677950,35674516,35674180,35672867,35671389,35664642,35659138,35655807,35654367,35651805,35635464,35634574,35627090,35625361,35605586,35595634,35572560,35570617,35549110,35548508,35538352	35809226,35775745,35775055,35770999,35762753,35761006,35756908,35752162,35750690,35748824,35742565,35738650,35728510,35725153,35723264,35721849,35690003,35686666,35685145,35683985,35678102,35674709,35674278,35673022,35671517,35664767,35659196,35655915,35654477,35651873,35635598,35634757,35627951,35625432,35605709,35595789,35572718,35570744,35549234,35548538,35539690	Gene ID= ENSG00000174373.16 TPM= 3.86 Transcript Type= protein_coding
chr14	35727474	35809257	35727474	35809257	-	transcript1024.chr14.nic@RALGAPA1	transcript1024.chr14.nic	protein_coding	35808730,35775635,35775006,35770942,35762710,35760829,35756793,35752024,35750482,35748585,35742368,35738513,35727474	35809257,35775745,35775055,35770999,35762753,35761006,35756908,35752162,35750690,35748824,35742565,35738650,35728510	Gene ID= ENSG00000174373.16 TPM= 1.93 Transcript Type= NA
chr14	35826318	35871963	35826318	35871963	+	ENST00000216807.11@BRMS1L	ENST00000216807.11	protein_coding	35826318,35831410,35832978,35834844,35862590,35863870,35864935,35865722,35867906,35870360	35826658,35831500,35833105,35834923,35862686,35863953,35864999,35865761,35868032,35871963	Gene ID= ENSG00000100916.13 TPM= 21.24 Transcript Type= protein_coding
chr14	36298558	36320676	36298558	36320676	-	ENST00000416007.8@MBIP	ENST00000416007.8	protein_coding	36320460,36316693,36314691,36314512,36311959,36311573,36308092,36300785,36298558	36320676,36316812,36314915,36314608,36312024,36311725,36308189,36300823,36299190	Gene ID= ENSG00000151332.18 TPM= 3.86 Transcript Type= protein_coding
chr14	36679289	37172866	36679289	37172866	-	ENST00000331299.5@SLC25A21	ENST00000331299.5	protein_coding	37172281,36874956,36813918,36734507,36729507,36725570,36711318,36684744,36683828,36679289	37172866,36875004,36814001,36734573,36729566,36725677,36711482,36684925,36683880,36680719	Gene ID= ENSG00000183032.11 TPM= 1.93 Transcript Type= protein_coding
chr14	38251415	38256098	38251415	38256098	-	transcript1042.chr14.nnic@NA	transcript1042.chr14.nnic	NA	38251415	38256098	Gene ID= novel_gene_chr14_1043 TPM= 1.93 Transcript Type= NA
chr14	38254103	38256369	38254103	38256369	-	ENST00000342213.2@CLEC14A	ENST00000342213.2	protein_coding	38254103	38256369	Gene ID= ENSG00000176435.6 TPM= 41.51 Transcript Type= protein_coding
chr14	39031920	39103528	39031920	39103528	-	ENST00000307712.10@SEC23A	ENST00000307712.10	protein_coding	39103032,39095898,39093187,39092541,39091477,39086929,39085762,39075935,39074415,39067173,39064913,39063324,39061765,39055143,39048652,39045163,39042786,39040732,39039031,39031920	39103528,39096139,39093244,39092627,39091713,39087008,39085906,39076093,39074530,39067296,39064993,39063413,39061871,39055296,39048729,39045324,39042872,39040887,39039096,39033328	Gene ID= ENSG00000100934.14 TPM= 103.29 Transcript Type= protein_coding
chr14	39031919	39103235	39031919	39103235	-	transcript1048.chr14.nnic@SEC23A	transcript1048.chr14.nnic	protein_coding	39103032,39095898,39093187,39092541,39091477,39085762,39075935,39074415,39067173,39064913,39063324,39061765,39055143,39048652,39045163,39042786,39040732,39039031,39031919	39103235,39096139,39093244,39092627,39091713,39085791,39076093,39074530,39067296,39064993,39063413,39061871,39055296,39048729,39045324,39042872,39040887,39039096,39033328	Gene ID= ENSG00000100934.14 TPM= 23.17 Transcript Type= NA
chr14	39114223	39136973	39114223	39136973	+	ENST00000308317.10@GEMIN2	ENST00000308317.10	protein_coding	39114223,39114829,39117999,39118540,39122430,39124992,39128280,39131958,39133661,39136440	39114475,39114913,39118088,39118599,39122543,39125036,39128348,39132068,39133719,39136973	Gene ID= ENSG00000092208.16 TPM= 9.65 Transcript Type= protein_coding
chr14	39147814	39170331	39147814	39170331	-	transcript1066.chr14.nnic@TRAPPC6B	transcript1066.chr14.nnic	protein_coding	39170015,39163246,39159483,39158285,39154211,39151746,39147814	39170331,39163361,39159550,39158402,39154294,39151839,39149570	Gene ID= ENSG00000182400.14 TPM= 2.25 Transcript Type= NA
chr14	39147812	39170308	39147812	39170308	-	transcript1071.chr14.nic@TRAPPC6B	transcript1071.chr14.nic	protein_coding	39170015,39159450,39158285,39151746,39147812	39170308,39159550,39158402,39151839,39150381	Gene ID= ENSG00000182400.14 TPM= 2.25 Transcript Type= NA
chr14	39147812	39170322	39147812	39170322	-	ENST00000330149.9@TRAPPC6B	ENST00000330149.9	protein_coding	39170015,39159483,39158285,39154211,39151746,39147812	39170322,39159550,39158402,39154294,39151839,39150381	Gene ID= ENSG00000182400.14 TPM= 8.04 Transcript Type= protein_coding
chr14	39266399	39350694	39266399	39350694	+	transcript1090.chr14.nic@CTAGE5	transcript1090.chr14.nic	protein_coding	39266399,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39326864,39345904,39347713,39348743,39350098	39266527,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39327022,39346026,39347771,39348977,39350694	Gene ID= ENSG00000150527.17 TPM= 5.31 Transcript Type= NA
chr14	39267414	39350694	39267414	39350694	+	ENST00000348007.7@CTAGE5	ENST00000348007.7	protein_coding	39267414,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39326864,39345904,39347713,39348743,39350098	39267522,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39327022,39346026,39347771,39348977,39350694	Gene ID= ENSG00000150527.17 TPM= 3.38 Transcript Type= protein_coding
chr14	39397669	39432500	39397669	39432500	-	ENST00000298097.7@FBXO33	ENST00000298097.7	protein_coding	39431564,39402401,39401176,39397669	39432500,39402511,39401861,39399787	Gene ID= ENSG00000165355.7 TPM= 7.72 Transcript Type= protein_coding
chr14	44897295	44907257	44897295	44907257	+	ENST00000325192.7@C14orf28	ENST00000325192.7	protein_coding	44897295,44900435,44903207,44904395,44905367	44897568,44900959,44903296,44904529,44907257	Gene ID= ENSG00000179476.7 TPM= 1.93 Transcript Type= protein_coding
chr14	44962208	45074431	44962208	45074431	+	ENST00000361577.7@TOGARAM1	ENST00000361577.7	protein_coding	44962208,44995746,44999363,45004061,45006008,45008913,45011975,45025783,45027299,45028176,45032223,45043686,45044635,45052436,45054431,45066578,45068424,45071712,45073296	44964467,44995902,44999497,45004366,45006267,45009145,45012075,45025872,45027474,45028329,45032376,45043791,45044870,45052562,45054549,45066767,45068643,45071798,45074431	Gene ID= ENSG00000198718.12 TPM= 5.79 Transcript Type= protein_coding
chr14	45084102	45115601	45084102	45115601	+	transcript1116.chr14.nic@PRPF39	transcript1116.chr14.nic	protein_coding	45084102,45095221,45096103,45096887,45102529,45107451,45108415,45109616,45109894,45110094,45110549,45112318,45114183,45114494,45114857	45084249,45095563,45096228,45097005,45102696,45107616,45108522,45109780,45109993,45110220,45110817,45112502,45114257,45114614,45115601	Gene ID= ENSG00000185246.17 TPM= 3.14 Transcript Type= NA
chr14	45084099	45115601	45084099	45115601	+	ENST00000355765.10@PRPF39	ENST00000355765.10	protein_coding	45084099,45095221,45096103,45096887,45102529,45107451,45108415,45109616,45110094,45110549,45112318,45114183,45114494,45114857	45084249,45095563,45096228,45097005,45102696,45107616,45108522,45109780,45110220,45110817,45112502,45114257,45114614,45115601	Gene ID= ENSG00000185246.17 TPM= 21.8 Transcript Type= protein_coding
chr14	45084128	45115601	45084128	45115601	+	ENST00000424478.5@PRPF39	ENST00000424478.5	protein_coding	45084128,45095221,45096103,45096424,45096887,45102529,45107451,45108415,45109616,45110094,45110549,45112318,45114183,45114494,45114857	45084249,45095563,45096228,45096758,45097005,45102696,45107616,45108522,45109780,45110220,45110817,45112502,45114257,45114614,45115601	Gene ID= ENSG00000185246.17 TPM= 1.53 Transcript Type= nonsense_mediated_decay
chr14	45084118	45115601	45084118	45115601	+	ENST00000477626.5@PRPF39	ENST00000477626.5	protein_coding	45084118,45095221,45096103,45102529,45107451,45108415,45109616,45110094,45110549,45112318,45114183,45114494,45114857	45084249,45095563,45097005,45102696,45107616,45108522,45109780,45110220,45110817,45112502,45114257,45114614,45115601	Gene ID= ENSG00000185246.17 TPM= 4.42 Transcript Type= retained_intron
chr14	45121483	45134512	45121483	45134512	-	transcript1133.chr14.nic@FKBP3	transcript1133.chr14.nic	protein_coding	45134349,45130699,45129794,45121483	45134512,45130800,45129901,45121620	Gene ID= ENSG00000100442.10 TPM= 8.69 Transcript Type= NA
chr14	49583572	49586376	49583572	49586376	-	ENST00000245458.10@RPS29	ENST00000245458.10	protein_coding	49586285,49585950,49583572	49586376,49586049,49583675	Gene ID= ENSG00000213741.9 TPM= 540.57 Transcript Type= protein_coding
chr14	49598786	49614672	49598786	49614672	+	transcript1141.chr14.nic@LRR1	transcript1141.chr14.nic	protein_coding	49598786,49602370,49603552,49607400,49614256	49599203,49602468,49603618,49608121,49614672	Gene ID= ENSG00000165501.16 TPM= 3.38 Transcript Type= NA
chr14	49598697	49614672	49598697	49614672	+	ENST00000298288.10@LRR1	ENST00000298288.10	protein_coding	49598697,49602370,49607400,49614256	49599203,49602468,49608121,49614672	Gene ID= ENSG00000165501.16 TPM= 2.41 Transcript Type= protein_coding
chr14	49618519	49620685	49618519	49620685	-	ENST00000298289.6@RPL36AL	ENST00000298289.6	protein_coding	49620562,49618519	49620685,49619140	Gene ID= ENSG00000165502.6 TPM= 211.4 Transcript Type= protein_coding
chr14	49620795	49623481	49620795	49623481	+	ENST00000305386.3@MGAT2	ENST00000305386.3	protein_coding	49620795	49623481	Gene ID= ENSG00000168282.5 TPM= 2.9 Transcript Type= protein_coding
chr14	49625174	49635230	49625174	49635230	-	ENST00000298292.12@DNAAF2	ENST00000298292.12	protein_coding	49633287,49628012,49625174	49635230,49628155,49626048	Gene ID= ENSG00000165506.14 TPM= 16.41 Transcript Type= protein_coding
chr14	49625174	49635230	49625174	49635230	-	ENST00000406043.3@DNAAF2	ENST00000406043.3	protein_coding	49633287,49625174	49635230,49626048	Gene ID= ENSG00000165506.14 TPM= 10.62 Transcript Type= protein_coding
chr14	49693105	49753152	49693105	49753152	+	ENST00000359332.6@KLHDC1	ENST00000359332.6	protein_coding	49693105,49709159,49709709,49710263,49723874,49725686,49728926,49729490,49732704,49734589,49740098,49743753,49751586	49693290,49709229,49709826,49710381,49723952,49725769,49729009,49729548,49732816,49734661,49740182,49743805,49753152	Gene ID= ENSG00000197776.7 TPM= 7.72 Transcript Type= protein_coding
chr14	49768112	49785905	49768112	49785905	+	transcript1180.chr14.nnic@KLHDC2	transcript1180.chr14.nnic	protein_coding	49768112,49771594,49774561,49777839,49778178,49778411,49779595,49779748,49780213,49780703,49782370,49782542,49785580	49768621,49771673,49774678,49777954,49778259,49778494,49779675,49779806,49780322,49780775,49782457,49782594,49785905	Gene ID= ENSG00000165516.10 TPM= 4.18 Transcript Type= NA
chr14	49768168	49783115	49768168	49783115	+	ENST00000555443.5@KLHDC2	ENST00000555443.5	protein_coding	49768168,49771594,49774561,49777839,49778178,49778411,49779595,49780213,49780703,49782370,49782542,49782830	49768621,49771673,49774678,49777954,49778259,49778494,49779806,49780322,49780775,49782457,49782594,49783115	Gene ID= ENSG00000165516.10 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr14	49782083	49853203	49782083	49853203	-	ENST00000298310.9@NEMF	ENST00000298310.9	protein_coding	49852695,49851807,49851563,49846140,49840718,49838139,49834363,49833423,49832207,49832051,49831299,49829349,49829054,49828616,49828291,49825867,49814754,49813988,49806021,49803237,49802669,49802453,49800420,49799636,49799475,49795791,49789496,49789146,49786718,49785220,49785092,49784925,49782083	49853203,49851875,49851665,49846265,49840866,49838206,49834449,49833496,49832277,49832126,49831361,49829426,49829262,49828807,49828354,49825955,49814857,49814050,49806133,49803294,49802727,49802573,49800696,49799678,49799524,49795944,49789573,49789343,49786750,49785320,49785135,49785004,49784713	Gene ID= ENSG00000165525.17 TPM= 2.9 Transcript Type= protein_coding
chr14	49828723	49852832	49828723	49852832	-	transcript1176.chr14.nic@NEMF	transcript1176.chr14.nic	protein_coding	49852695,49851807,49851563,49846140,49840718,49838139,49834363,49833423,49832207,49832051,49831299,49829349,49829054,49828723	49852832,49851875,49851665,49846265,49840866,49838206,49834449,49833496,49832277,49832126,49831361,49829426,49829262,49828787	Gene ID= ENSG00000165525.17 TPM= 1.93 Transcript Type= NA
chr14	49891542	49893457	49891542	49893457	-	transcript1199.chr14.nnic@NA	transcript1199.chr14.nnic	NA	49891542	49893457	Gene ID= novel_gene_chr14_1200 TPM= 1.93 Transcript Type= NA
chr14	49893092	49897054	49893092	49897054	+	ENST00000298316.6@ARF6	ENST00000298316.6	protein_coding	49893092,49893256	49893157,49897054	Gene ID= ENSG00000165527.6 TPM= 53.09 Transcript Type= protein_coding
chr14	50108632	50116567	50108632	50116567	-	transcript1204.chr14.nnic@VCPKMT	transcript1204.chr14.nnic	protein_coding	50116287,50116080,50115839,50114285,50113387,50108632	50116567,50116179,50115911,50114404,50113512,50109713	Gene ID= ENSG00000100483.13 TPM= 1.93 Transcript Type= NA
chr14	50108633	50116600	50108633	50116600	-	ENST00000491402.5@VCPKMT	ENST00000491402.5	protein_coding	50116287,50116080,50115839,50114285,50112615,50108633	50116600,50116179,50115911,50114404,50112719,50109713	Gene ID= ENSG00000100483.13 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr14	50108638	50116567	50108638	50116567	-	transcript1210.chr14.nic@VCPKMT	transcript1210.chr14.nic	protein_coding	50116287,50116080,50115839,50114285,50108638	50116567,50116179,50115911,50114404,50109713	Gene ID= ENSG00000100483.13 TPM= 1.93 Transcript Type= NA
chr14	50108633	50116557	50108633	50116557	-	ENST00000395860.6@VCPKMT	ENST00000395860.6	protein_coding	50116287,50116069,50115839,50114285,50112615,50108633	50116557,50116179,50115911,50114404,50112719,50109713	Gene ID= ENSG00000100483.13 TPM= 6.76 Transcript Type= protein_coding
chr14	50138756	50231744	50138756	50231744	-	transcript1216.chr14.nic@SOS2	transcript1216.chr14.nic	protein_coding	50231197,50204284,50200953,50199691,50188497,50182463,50180572,50174454,50161482,50159431,50158565,50156999,50153070,50150008,50145477,50145170,50139942,50138756	50231744,50204409,50201084,50199855,50188700,50182606,50180682,50174552,50161609,50160086,50158646,50157121,50153173,50150230,50145596,50145332,50140059,50138784	Gene ID= ENSG00000100485.11 TPM= 13.51 Transcript Type= NA
chr14	50155892	50231924	50155892	50231924	-	transcript1226.chr14.nic@SOS2	transcript1226.chr14.nic	protein_coding	50231197,50204284,50200953,50199691,50188497,50182463,50180572,50174454,50161482,50159431,50158565,50155892	50231924,50204409,50201084,50199855,50188700,50182606,50180682,50174552,50161609,50160086,50158646,50157121	Gene ID= ENSG00000100485.11 TPM= 5.15 Transcript Type= NA
chr14	50117120	50231558	50117120	50231558	-	ENST00000216373.9@SOS2	ENST00000216373.9	protein_coding	50231197,50204284,50200953,50199691,50188497,50182463,50180572,50174454,50161482,50159431,50158565,50156999,50153070,50150008,50145477,50145170,50139942,50138612,50134123,50130501,50129961,50120275,50117120	50231558,50204409,50201084,50199855,50188700,50182606,50180682,50174552,50161609,50160086,50158646,50157121,50153173,50150230,50145596,50145332,50140059,50138784,50134239,50130762,50130002,50120384,50118853	Gene ID= ENSG00000100485.11 TPM= 19.31 Transcript Type= protein_coding
chr14	50242434	50312548	50242434	50312548	-	ENST00000267436.8@L2HGDH	ENST00000267436.8	protein_coding	50312011,50302902,50302017,50294115,50283871,50278520,50269163,50267753,50265358,50242434	50312548,50303017,50302168,50294246,50284033,50278554,50269330,50267910,50265489,50247253	Gene ID= ENSG00000087299.11 TPM= 4.83 Transcript Type= protein_coding
chr14	50312324	50326248	50312324	50326248	+	transcript1243.chr14.nnic@ATP5S	transcript1243.chr14.nnic	protein_coding	50312324,50314591,50321483,50322511,50323945,50325609	50312389,50314626,50321594,50322719,50324116,50326248	Gene ID= ENSG00000125375.14 TPM= 2.9 Transcript Type= NA
chr14	50312301	50326248	50312301	50326248	+	transcript1253.chr14.nnic@ATP5S	transcript1253.chr14.nnic	protein_coding	50312301,50321483,50322511,50323945,50325609	50312389,50321594,50322719,50324160,50326248	Gene ID= ENSG00000125375.14 TPM= 1.93 Transcript Type= NA
chr14	50312324	50322892	50312324	50322892	+	transcript1259.chr14.nnic@ATP5S	transcript1259.chr14.nnic	protein_coding	50312324,50314591,50321483,50322511	50312389,50314626,50321594,50322892	Gene ID= ENSG00000125375.14 TPM= 2.41 Transcript Type= NA
chr14	50312301	50322892	50312301	50322892	+	transcript1260.chr14.nic@ATP5S	transcript1260.chr14.nic	protein_coding	50312301,50321483,50322511	50312389,50321594,50322892	Gene ID= ENSG00000125375.14 TPM= 4.34 Transcript Type= NA
chr14	50312373	50314421	50312373	50314421	+	transcript1261.chr14.nnic@NA	transcript1261.chr14.nnic	NA	50312373	50314421	Gene ID= novel_gene_chr14_1262 TPM= 2.9 Transcript Type= NA
chr14	50418525	50532609	50418525	50532609	-	ENST00000013125.8@MAP4K5	ENST00000013125.8	protein_coding	50532400,50531942,50504800,50486104,50485578,50482361,50476259,50476128,50475077,50468651,50466583,50464052,50462665,50456516,50448774,50447414,50446079,50445041,50443939,50443729,50442732,50440362,50440013,50437894,50437476,50434962,50434394,50429192,50428662,50425907,50423121,50418525	50532609,50532158,50504857,50486194,50485642,50482416,50476306,50476170,50475149,50468782,50466645,50464133,50462781,50456594,50448832,50447481,50446121,50445194,50444036,50443770,50442816,50440441,50440073,50438011,50437534,50435065,50434571,50429260,50428754,50425977,50423176,50420106	Gene ID= ENSG00000012983.11 TPM= 2.9 Transcript Type= protein_coding
chr14	50418525	50532602	50418525	50532602	-	transcript1264.chr14.nic@MAP4K5	transcript1264.chr14.nic	protein_coding	50532448,50531942,50504800,50486104,50485578,50482361,50476259,50476128,50475077,50468651,50466583,50464052,50462665,50456516,50448774,50447414,50446079,50445041,50443939,50443729,50442732,50440362,50440013,50437894,50437476,50434962,50434394,50429192,50428662,50425907,50423121,50418525	50532602,50532158,50504857,50486194,50485642,50482416,50476306,50476170,50475149,50468782,50466645,50464133,50462781,50456594,50448832,50447481,50446121,50445194,50444036,50443770,50442816,50440441,50440073,50438011,50437534,50435065,50434571,50429260,50428754,50425977,50423176,50420106	Gene ID= ENSG00000012983.11 TPM= 2.9 Transcript Type= NA
chr14	50533026	50633049	50533026	50633049	+	ENST00000441560.6@ATL1	ENST00000441560.6	protein_coding	50533026,50560127,50587831,50590941,50591535,50593846,50595576,50613259,50614373,50620599,50621843,50623177,50628031,50632229	50533367,50560299,50588078,50591075,50591639,50593896,50595632,50613351,50614511,50620726,50621899,50623248,50628462,50633049	Gene ID= ENSG00000198513.11 TPM= 2.9 Transcript Type= protein_coding
chr14	50662511	50668342	50662511	50668342	-	transcript1287.chr14.nic@SAV1	transcript1287.chr14.nic	protein_coding	50667874,50662511	50668342,50665619	Gene ID= ENSG00000151748.14 TPM= 3.86 Transcript Type= NA
chr14	50664443	50668297	50664443	50668297	-	transcript1290.chr14.nic@SAV1	transcript1290.chr14.nic	protein_coding	50667874,50664443	50668297,50665619	Gene ID= ENSG00000151748.14 TPM= 1.93 Transcript Type= NA
chr14	50633636	50668331	50633636	50668331	-	ENST00000324679.4@SAV1	ENST00000324679.4	protein_coding	50667874,50665179,50644744,50640750,50633636	50668331,50665619,50645014,50640893,50635384	Gene ID= ENSG00000151748.14 TPM= 19.31 Transcript Type= protein_coding
chr14	50727236	50792939	50727236	50792939	-	transcript1295.chr14.nic@NIN	transcript1295.chr14.nic	protein_coding	50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763826,50761790,50759857,50756492,50754742,50754563,50752518,50747992,50744243,50743416,50741582,50739308,50738140,50735516,50730923,50729523,50727236	50792939,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964,50761911,50760359,50758630,50754867,50754632,50752733,50748105,50744365,50743529,50741728,50739487,50738286,50735617,50730983,50729723,50727751	Gene ID= ENSG00000100503.23 TPM= 3.38 Transcript Type= NA
chr14	50759856	50831161	50759856	50831161	-	transcript1296.chr14.nic@NIN	transcript1296.chr14.nic	protein_coding	50831006,50830464,50821874,50806737,50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763826,50761790,50759856	50831161,50830517,50822077,50806818,50792881,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964,50761911,50760359	Gene ID= ENSG00000100503.23 TPM= 2.9 Transcript Type= NA
chr14	51240168	51257546	51240168	51257546	+	ENST00000457354.6@TMX1	ENST00000457354.6	protein_coding	51240168,51243856,51245313,51247092,51249326,51249468,51249693,51254341	51240444,51243971,51245358,51247220,51249371,51249569,51249765,51257546	Gene ID= ENSG00000139921.12 TPM= 1.93 Transcript Type= protein_coding
chr14	51651858	51730727	51651858	51730727	+	ENST00000395718.6@FRMD6	ENST00000395718.6	protein_coding	51651858,51689691,51698142,51701056,51702512,51704749,51708078,51711531,51712483,51715325,51720055,51721949,51725779,51727745	51651996,51689935,51698232,51701135,51702588,51704935,51708233,51711596,51712551,51715499,51720390,51722080,51725870,51730727	Gene ID= ENSG00000139926.15 TPM= 3.86 Transcript Type= protein_coding
chr14	51989475	52010691	51989475	52010691	+	ENST00000261700.7@C14orf166	ENST00000261700.7	protein_coding	51989475,51991317,51993723,51998494,51999708,52001798,52004194,52004362	51989700,51991441,51993822,51998580,51999796,52001866,52004242,52010691	Gene ID= ENSG00000087302.8 TPM= 148.66 Transcript Type= protein_coding
chr14	51989615	52004653	51989615	52004653	+	ENST00000556760.5@C14orf166	ENST00000556760.5	protein_coding	51989615,51991317,51993723,51998494,51999708,52001798,52004240,52004362	51989700,51991441,51993822,51998580,51999796,52001866,52004242,52004653	Gene ID= ENSG00000087302.8 TPM= 1.93 Transcript Type= protein_coding
chr14	52430590	52552506	52430590	52552506	-	ENST00000281741.8@TXNDC16	ENST00000281741.8	protein_coding	52552316,52544264,52543398,52542371,52537599,52536719,52519172,52514880,52511240,52490839,52490391,52488363,52482822,52482230,52470512,52470037,52457090,52455324,52440564,52439204,52430590	52552506,52544371,52543630,52542453,52537672,52536793,52519293,52514970,52511390,52491005,52490451,52488486,52482965,52482289,52470680,52470173,52457174,52455462,52440724,52439394,52432587	Gene ID= ENSG00000087301.8 TPM= 1.93 Transcript Type= protein_coding
chr14	52707163	52727990	52707163	52727990	+	transcript1337.chr14.nnic@PSMC6	transcript1337.chr14.nnic	protein_coding	52707163,52708309,52708483,52708764,52709575,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723965,52727499	52707304,52708388,52708522,52708816,52709681,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52724036,52727990	Gene ID= ENSG00000100519.11 TPM= 4.28 Transcript Type= NA
chr14	52707163	52727670	52707163	52727670	+	transcript1338.chr14.nnic@PSMC6	transcript1338.chr14.nnic	protein_coding	52707163,52708309,52708483,52708764,52709575,52711047,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723965,52727499	52707304,52708388,52708522,52708816,52711013,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52724036,52727670	Gene ID= ENSG00000100519.11 TPM= 2.9 Transcript Type= NA
chr14	52707163	52727990	52707163	52727990	+	transcript1340.chr14.nnic@PSMC6	transcript1340.chr14.nnic	protein_coding	52707163,52708309,52708483,52708764,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723759,52723965,52727499	52707304,52708388,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52723874,52724036,52727990	Gene ID= ENSG00000100519.11 TPM= 3.31 Transcript Type= NA
chr14	52707163	52727990	52707163	52727990	+	transcript1341.chr14.nnic@PSMC6	transcript1341.chr14.nnic	protein_coding	52707163,52708309,52708483,52708764,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723805,52723965,52727499	52707304,52708388,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52723874,52724036,52727990	Gene ID= ENSG00000100519.11 TPM= 3.31 Transcript Type= NA
chr14	52707201	52727990	52707201	52727990	+	transcript1349.chr14.nic@PSMC6	transcript1349.chr14.nic	protein_coding	52707201,52708309,52708483,52708764,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723965,52727499	52707529,52708388,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52724036,52727990	Gene ID= ENSG00000100519.11 TPM= 8.14 Transcript Type= NA
chr14	52707204	52727991	52707204	52727991	+	ENST00000606149.5@PSMC6	ENST00000606149.5	protein_coding	52707204,52708309,52708483,52708764,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723965,52727499	52707304,52708388,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52724036,52727991	Gene ID= ENSG00000100519.11 TPM= 360.48 Transcript Type= protein_coding
chr14	52730180	52774941	52730180	52774941	+	ENST00000442123.6@STYX	ENST00000442123.6	protein_coding	52730180,52730459,52744852,52746426,52750683,52756551,52757319,52757743,52757874,52759682,52768840,52771033	52730210,52730531,52744884,52746479,52750780,52756611,52757355,52757782,52757924,52759754,52768933,52774941	Gene ID= ENSG00000198252.11 TPM= 6.76 Transcript Type= protein_coding
chr14	52730182	52774998	52730182	52774998	+	ENST00000354586.4@STYX	ENST00000354586.4	protein_coding	52730182,52744852,52746426,52750683,52756551,52757319,52757743,52757874,52759682,52768840,52771033	52730531,52744884,52746479,52750780,52756611,52757355,52757782,52757924,52759754,52768933,52774998	Gene ID= ENSG00000198252.11 TPM= 6.76 Transcript Type= protein_coding
chr14	52775194	52791601	52775194	52791601	-	ENST00000216410.7@GNPNAT1	ENST00000216410.7	protein_coding	52791428,52784497,52783423,52781784,52780679,52775194	52791601,52784664,52783485,52781911,52780740,52778458	Gene ID= ENSG00000100522.8 TPM= 2.9 Transcript Type= protein_coding
chr14	52857272	52951072	52857272	52951072	-	transcript1378.chr14.nnic@FERMT2	transcript1378.chr14.nnic	protein_coding	52950921,52950412,52919123,52893293,52890319,52888423,52881796,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52861587,52861014,52860341,52859573,52857272	52951072,52950577,52919356,52893427,52890441,52888454,52881828,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52861610,52861034,52860465,52859714,52858550	Gene ID= ENSG00000073712.14 TPM= 3.01 Transcript Type= NA
chr14	52857272	52951282	52857272	52951282	-	transcript1380.chr14.nic@FERMT2	transcript1380.chr14.nic	protein_coding	52950921,52950412,52919123,52893293,52881796,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52861587,52861014,52860341,52859573,52857272	52951282,52950577,52919356,52893427,52881828,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52861610,52861034,52860465,52859714,52858550	Gene ID= ENSG00000073712.14 TPM= 33.42 Transcript Type= NA
chr14	52857272	52951204	52857272	52951204	-	transcript1382.chr14.nic@FERMT2	transcript1382.chr14.nic	protein_coding	52950412,52919123,52893293,52881796,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52861587,52861014,52860341,52859573,52857272	52951204,52919356,52893427,52881828,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52861610,52861034,52860465,52859714,52858550	Gene ID= ENSG00000073712.14 TPM= 10.25 Transcript Type= NA
chr14	52857268	52951097	52857268	52951097	-	ENST00000341590.7@FERMT2	ENST00000341590.7	protein_coding	52950921,52950412,52919123,52893293,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52860341,52859573,52857268	52951097,52950577,52919356,52893427,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52860465,52859714,52858550	Gene ID= ENSG00000073712.14 TPM= 8.16 Transcript Type= protein_coding
chr14	54396955	54420218	54396955	54420218	+	ENST00000335183.10@CDKN3	ENST00000335183.10	protein_coding	54396955,54399894,54401524,54408745,54411484,54415899,54417848,54419992	54397077,54399976,54401579,54408789,54411706,54415930,54417951,54420218	Gene ID= ENSG00000100526.19 TPM= 1.93 Transcript Type= protein_coding
chr14	54474491	54488848	54474491	54488848	-	transcript1412.chr14.nic@GMFB	transcript1412.chr14.nic	protein_coding	54488682,54483671,54482153,54481409,54480874,54479786,54474491	54488848,54483767,54482202,54481458,54480956,54479859,54478159	Gene ID= ENSG00000197045.12 TPM= 2.9 Transcript Type= NA
chr14	54474485	54489196	54474485	54489196	-	ENST00000358056.7@GMFB	ENST00000358056.7	protein_coding	54488925,54483671,54482153,54481409,54480874,54479786,54474485	54489196,54483767,54482202,54481458,54480956,54479859,54478159	Gene ID= ENSG00000197045.12 TPM= 24.13 Transcript Type= protein_coding
chr14	54509871	54538614	54509871	54538614	+	transcript1422.chr14.nic@CGRRF1	transcript1422.chr14.nic	protein_coding	54509871,54522454,54523150,54530049,54530903,54537722,54538063	54510063,54522593,54523245,54530226,54531050,54537829,54538614	Gene ID= ENSG00000100532.11 TPM= 2.9 Transcript Type= NA
chr14	54509828	54539309	54509828	54539309	+	ENST00000216420.11@CGRRF1	ENST00000216420.11	protein_coding	54509828,54522454,54530049,54530903,54537722,54538063	54510063,54522593,54530226,54531050,54537829,54539309	Gene ID= ENSG00000100532.11 TPM= 26.06 Transcript Type= protein_coding
chr14	54567097	54789127	54567097	54789127	+	ENST00000554335.5@SAMD4A	ENST00000554335.5	protein_coding	54567097,54567496,54702062,54737024,54748815,54751451,54760161,54764455,54770104,54774934,54776414,54784537,54788916	54567338,54568112,54702580,54737287,54748924,54751537,54760494,54764540,54770222,54775135,54776540,54784620,54789127	Gene ID= ENSG00000020577.13 TPM= 6.76 Transcript Type= protein_coding
chr14	54784266	54789128	54784266	54789128	+	ENST00000555719.1@SAMD4A	ENST00000555719.1	protein_coding	54784266,54784537,54788916	54784381,54784620,54789128	Gene ID= ENSG00000020577.13 TPM= 2.9 Transcript Type= processed_transcript
chr14	54784351	54789127	54784351	54789127	+	transcript1436.chr14.nic@SAMD4A	transcript1436.chr14.nic	protein_coding	54784351,54784537,54788916	54784447,54784620,54789127	Gene ID= ENSG00000020577.13 TPM= 9.65 Transcript Type= NA
chr14	54774962	54789128	54774962	54789128	+	ENST00000556069.5@SAMD4A	ENST00000556069.5	protein_coding	54774962,54776414,54784340,54788916	54775135,54776540,54784620,54789128	Gene ID= ENSG00000020577.13 TPM= 4.83 Transcript Type= retained_intron
chr14	54685043	54687574	54685043	54687574	-	transcript1438.chr14.nnic@NA	transcript1438.chr14.nnic	NA	54687300,54685043	54687574,54685875	Gene ID= novel_gene_chr14_1439 TPM= 3.38 Transcript Type= NA
chr14	54685100	54687574	54685100	54687574	-	transcript1440.chr14.nnic@NA	transcript1440.chr14.nnic	NA	54687300,54685100	54687574,54685875	Gene ID= novel_gene_chr14_1441 TPM= 2.41 Transcript Type= NA
chr14	54783097	54784427	54783097	54784427	-	transcript1442.chr14.nnic@NA	transcript1442.chr14.nnic	NA	54783097	54784427	Gene ID= novel_gene_chr14_1443 TPM= 1.93 Transcript Type= NA
chr14	55051631	55070192	55051631	55070192	+	ENST00000395468.8@MAPK1IP1L	ENST00000395468.8	protein_coding	55051631,55061680,55062618,55064616	55051803,55061701,55063325,55070192	Gene ID= ENSG00000168175.14 TPM= 27.99 Transcript Type= protein_coding
chr14	55129044	55145403	55129044	55145403	+	ENST00000254301.13@LGALS3	ENST00000254301.13	protein_coding	55129044,55137370,55138045,55140275,55142584,55145116	55129300,55137391,55138368,55140363,55142749,55145403	Gene ID= ENSG00000131981.15 TPM= 50.2 Transcript Type= protein_coding
chr14	55271303	55353609	55271303	55353609	+	ENST00000313833.4@FBXO34	ENST00000313833.4	protein_coding	55271303,55350381	55271537,55353609	Gene ID= ENSG00000178974.9 TPM= 155.42 Transcript Type= protein_coding
chr14	55366391	55411835	55366391	55411835	-	transcript1468.chr14.nnic@ATG14	transcript1468.chr14.nnic	protein_coding	55411602,55397372,55395940,55390911,55385859,55381962,55380573,55377984,55377819,55368522,55366391	55411835,55397434,55395982,55390992,55386096,55382191,55380690,55378074,55377904,55369925,55367475	Gene ID= ENSG00000126775.8 TPM= 12.07 Transcript Type= NA
chr14	55366392	55411858	55366392	55411858	-	ENST00000247178.5@ATG14	ENST00000247178.5	protein_coding	55411602,55397372,55395940,55390911,55385859,55381962,55380573,55377984,55377819,55366392	55411858,55397434,55395982,55390992,55386096,55382191,55380690,55378074,55377904,55369925	Gene ID= ENSG00000126775.8 TPM= 7.24 Transcript Type= protein_coding
chr14	55580194	55684579	55580194	55684579	+	transcript1494.chr14.nic@KTN1	transcript1494.chr14.nic	protein_coding	55580194,55601757,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55601880,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 23.77 Transcript Type= NA
chr14	55580186	55684579	55580186	55684579	+	transcript1500.chr14.nic@KTN1	transcript1500.chr14.nic	protein_coding	55580186,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 69.31 Transcript Type= NA
chr14	55580315	55684579	55580315	55684579	+	ENST00000438792.6@KTN1	ENST00000438792.6	protein_coding	55580315,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 2 Transcript Type= protein_coding
chr14	55580317	55684579	55580317	55684579	+	ENST00000395314.7@KTN1	ENST00000395314.7	protein_coding	55580317,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55673172,55675835,55678352,55679565,55684099	55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55673255,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 5.98 Transcript Type= protein_coding
chr14	55661274	55684576	55661274	55684576	+	ENST00000555573.5@KTN1	ENST00000555573.5	protein_coding	55661274,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684576	Gene ID= ENSG00000126777.17 TPM= 12.74 Transcript Type= protein_coding
chr14	57200507	57269008	57200507	57269008	-	ENST00000621441.4@EXOC5	ENST00000621441.4	protein_coding	57268622,57247618,57246711,57244165,57239595,57237338,57235711,57233988,57233743,57232667,57231506,57229734,57222308,57219322,57217982,57209953,57209567,57200507	57269008,57247712,57246858,57244359,57239659,57237366,57235820,57234032,57233883,57232749,57231715,57229881,57222416,57219442,57218068,57210061,57209782,57208797	Gene ID= ENSG00000070367.15 TPM= 25.1 Transcript Type= protein_coding
chr14	57268909	57298742	57268909	57298742	+	ENST00000261558.7@AP5M1	ENST00000261558.7	protein_coding	57268909,57274244,57280195,57282089,57282934,57283112,57286223,57288802	57269388,57274889,57280422,57282228,57283019,57283230,57286319,57298742	Gene ID= ENSG00000053770.11 TPM= 4.83 Transcript Type= protein_coding
chr14	57293088	57295725	57293088	57295725	+	transcript1573.chr14.nnic@NA	transcript1573.chr14.nnic	NA	57293088	57295725	Gene ID= novel_gene_chr14_1574 TPM= 1.93 Transcript Type= NA
chr14	57390553	57415917	57390553	57415917	+	ENST00000556492.5@NAA30	ENST00000556492.5	protein_coding	57390553,57390957,57396752,57399828,57409379	57390705,57391728,57396875,57399883,57415917	Gene ID= ENSG00000139977.13 TPM= 7.72 Transcript Type= protein_coding
chr14	57390706	57412746	57390706	57412746	+	transcript1584.chr14.nic@NAA30	transcript1584.chr14.nic	protein_coding	57390706,57396752,57399828,57409379	57391728,57396875,57399883,57412746	Gene ID= ENSG00000139977.13 TPM= 25.1 Transcript Type= NA
chr14	57390564	57394093	57390564	57394093	+	transcript1588.chr14.nic@NAA30	transcript1588.chr14.nic	protein_coding	57390564,57390957	57390705,57394093	Gene ID= ENSG00000139977.13 TPM= 5.31 Transcript Type= NA
chr14	58000761	58152213	58000761	58152213	-	ENST00000267485.7@C14orf37	ENST00000267485.7	protein_coding	58152075,58137990,58133090,58131512,58096724,58012119,58005048,58000761	58152213,58139414,58133341,58131721,58096981,58012150,58005182,58004804	Gene ID= ENSG00000139971.15 TPM= 2.9 Transcript Type= protein_coding
chr14	58200112	58234790	58200112	58234790	+	transcript1595.chr14.nic@ACTR10	transcript1595.chr14.nic	protein_coding	58200112,58202855,58207936,58208999,58215205,58219694,58223622,58223783,58230399,58232066,58234370	58200294,58202927,58208018,58209107,58215284,58219729,58223701,58223856,58230480,58232267,58234790	Gene ID= ENSG00000131966.13 TPM= 12.55 Transcript Type= NA
chr14	58200149	58234790	58200149	58234790	+	transcript1597.chr14.nnic@ACTR10	transcript1597.chr14.nnic	protein_coding	58200149,58202855,58207936,58208999,58219694,58223622,58223783,58230399,58232066,58234370	58200294,58202927,58208018,58209107,58219729,58223701,58223856,58230480,58232267,58234790	Gene ID= ENSG00000131966.13 TPM= 3.86 Transcript Type= NA
chr14	58200080	58234760	58200080	58234760	+	ENST00000545307.6@ACTR10	ENST00000545307.6	protein_coding	58200080,58202855,58207936,58208999,58211292,58213641,58215205,58219694,58223622,58223783,58230399,58232066,58234370	58200294,58202927,58208018,58209107,58211410,58213698,58215284,58219729,58223701,58223856,58230480,58232267,58234760	Gene ID= ENSG00000131966.13 TPM= 16.41 Transcript Type= nonsense_mediated_decay
chr14	58200138	58235636	58200138	58235636	+	ENST00000254286.8@ACTR10	ENST00000254286.8	protein_coding	58200138,58202855,58207936,58208999,58211292,58213631,58215205,58219694,58223622,58223783,58230399,58232066,58234370	58200294,58202927,58208018,58209107,58211399,58213698,58215284,58219729,58223701,58223856,58230480,58232267,58235636	Gene ID= ENSG00000131966.13 TPM= 11.58 Transcript Type= protein_coding
chr14	58244831	58272007	58244831	58272007	+	ENST00000216455.8@PSMA3	ENST00000216455.8	protein_coding	58244831,58247750,58252119,58257745,58257925,58260948,58263705,58267474,58270418,58270934,58271851	58244941,58247832,58252242,58257846,58257998,58261020,58263770,58267520,58270485,58270998,58272007	Gene ID= ENSG00000100567.12 TPM= 161.21 Transcript Type= protein_coding
chr14	58267021	58298129	58267021	58298129	-	transcript1611.chr14.nnic@PSMA3-AS1	transcript1611.chr14.nnic	antisense_RNA	58297955,58291635,58274097,58273979,58267021	58298129,58291707,58274135,58274010,58267393	Gene ID= ENSG00000257621.7 TPM= 1.93 Transcript Type= NA
chr14	58298502	58351252	58298502	58351252	+	transcript1621.chr14.nic@ARID4A	transcript1621.chr14.nic	protein_coding	58298502,58299798,58301580,58304944,58306022,58318542,58318711,58323485,58328237,58329528,58330003,58344695,58346411,58347020,58347647,58351073	58298700,58299860,58301690,58305009,58306112,58318621,58318805,58323617,58328316,58329604,58330169,58344767,58346505,58347117,58347878,58351252	Gene ID= ENSG00000032219.18 TPM= 2.9 Transcript Type= NA
chr14	58408494	58427614	58408494	58427614	-	ENST00000395159.6@TIMM9	ENST00000395159.6	protein_coding	58427392,58427054,58424008,58411907,58410843,58408494	58427614,58427242,58424095,58411971,58410938,58409168	Gene ID= ENSG00000100575.13 TPM= 4.83 Transcript Type= protein_coding
chr14	59188669	59367547	59188669	59367547	+	transcript1642.chr14.nic@DAAM1	transcript1642.chr14.nic	protein_coding	59188669,59263441,59291217,59315280,59320490,59322892,59324128,59324351,59325664,59325960,59326510,59326933,59330501,59331209,59331813,59340074,59347539,59352526,59353876,59355165,59359397,59360802,59363651,59367429	59188768,59263660,59291306,59315351,59320584,59323225,59324238,59324454,59325730,59326077,59326648,59326991,59330688,59331508,59331920,59340180,59347623,59352632,59353964,59355333,59359504,59360862,59363782,59367547	Gene ID= ENSG00000100592.15 TPM= 2.9 Transcript Type= NA
chr14	59472617	59484430	59472617	59484430	-	ENST00000247194.8@L3HYPDH	ENST00000247194.8	protein_coding	59483809,59479182,59476092,59475869,59472617	59484430,59479351,59476214,59476006,59473090	Gene ID= ENSG00000126790.11 TPM= 1.93 Transcript Type= protein_coding
chr14	59484545	59504705	59484545	59504705	+	ENST00000554271.5@JKAMP	ENST00000554271.5	protein_coding	59484545,59486713,59487674,59495018,59498727,59501191,59503854	59485116,59486804,59487828,59495224,59498908,59501267,59504705	Gene ID= ENSG00000050130.17 TPM= 3.54 Transcript Type= protein_coding
chr14	59484443	59504715	59484443	59504715	+	ENST00000261247.13@JKAMP	ENST00000261247.13	protein_coding	59484443,59486713,59487674,59495018,59498727,59501191,59503854	59484593,59486804,59487828,59495224,59498908,59501267,59504715	Gene ID= ENSG00000050130.17 TPM= 18.99 Transcript Type= protein_coding
chr14	59484503	59504703	59484503	59504703	+	ENST00000425728.6@JKAMP	ENST00000425728.6	protein_coding	59484503,59486731,59487674,59495018,59498727,59501191,59503854	59484593,59486804,59487828,59495224,59498908,59501267,59504703	Gene ID= ENSG00000050130.17 TPM= 5.47 Transcript Type= protein_coding
chr14	60091919	60134814	60091919	60134814	+	ENST00000406854.5@PCNX4	ENST00000406854.5	protein_coding	60091919,60107586,60114700,60114974,60115719,60115941,60118329,60121196,60124218,60125637,60133970	60092419,60108327,60114879,60115461,60115819,60116060,60118692,60121299,60125251,60125823,60134814	Gene ID= ENSG00000126773.12 TPM= 4.83 Transcript Type= protein_coding
chr14	60091911	60148221	60091911	60148221	+	ENST00000317623.8@PCNX4	ENST00000317623.8	protein_coding	60091911,60114700,60114974,60115719,60115941,60118329,60121196,60124218,60125637,60133970	60092419,60114879,60115461,60115819,60116060,60118692,60121299,60125251,60125823,60148221	Gene ID= ENSG00000126773.12 TPM= 3.86 Transcript Type= protein_coding
chr14	60144784	60166395	60144784	60166395	-	transcript1686.chr14.nic@DHRS7	transcript1686.chr14.nic	protein_coding	60166203,60165177,60156000,60153959,60152939,60150065,60149353,60144784	60166395,60165605,60156152,60154065,60153178,60150187,60149568,60145013	Gene ID= ENSG00000100612.13 TPM= 139.17 Transcript Type= NA
chr14	60144784	60165429	60144784	60165429	-	ENST00000557185.5@DHRS7	ENST00000557185.5	protein_coding	60165177,60156000,60153959,60152939,60150065,60149353,60144784	60165429,60156152,60154065,60153178,60150187,60149568,60145013	Gene ID= ENSG00000100612.13 TPM= 1025.81 Transcript Type= protein_coding
chr14	60148948	60165293	60148948	60165293	-	ENST00000554101.5@DHRS7	ENST00000554101.5	protein_coding	60165177,60156000,60153959,60152939,60150065,60148948	60165293,60156152,60154065,60153178,60150187,60149568	Gene ID= ENSG00000100612.13 TPM= 3.06 Transcript Type= protein_coding
chr14	60152689	60165350	60152689	60165350	-	ENST00000556502.1@DHRS7	ENST00000556502.1	protein_coding	60165177,60156000,60153959,60152689	60165350,60156152,60154065,60153178	Gene ID= ENSG00000100612.13 TPM= 4.83 Transcript Type= retained_intron
chr14	60249202	60293355	60249202	60293355	+	transcript1698.chr14.nnic@PPM1A	transcript1698.chr14.nnic	protein_coding	60249202,60277005,60277313,60278573,60282684,60285624,60289806,60291397,60292453	60249677,60277091,60277365,60278702,60283537,60285741,60289914,60291454,60293355	Gene ID= ENSG00000100614.17 TPM= 8.87 Transcript Type= NA
chr14	60249200	60293349	60249200	60293349	+	transcript1716.chr14.nnic@PPM1A	transcript1716.chr14.nnic	protein_coding	60249200,60282684,60285624,60289806,60291397,60291532,60292453	60249677,60283537,60285741,60289914,60291454,60291643,60293349	Gene ID= ENSG00000100614.17 TPM= 6.27 Transcript Type= NA
chr14	60249209	60293355	60249209	60293355	+	transcript1720.chr14.nic@PPM1A	transcript1720.chr14.nic	protein_coding	60249209,60250380,60282684,60285624,60289806,60291397,60292453	60249677,60250481,60283537,60285741,60289914,60291454,60293355	Gene ID= ENSG00000100614.17 TPM= 5.01 Transcript Type= NA
chr14	60249238	60293355	60249238	60293355	+	transcript1722.chr14.nnic@PPM1A	transcript1722.chr14.nnic	protein_coding	60249238,60278573,60282684,60285624,60289806,60291397,60292453	60249677,60278702,60283537,60285741,60289914,60291454,60293355	Gene ID= ENSG00000100614.17 TPM= 5.01 Transcript Type= NA
chr14	60249200	60288555	60249200	60288555	+	transcript1742.chr14.nic@PPM1A	transcript1742.chr14.nic	protein_coding	60249200,60282684,60285624	60249677,60283537,60288555	Gene ID= ENSG00000100614.17 TPM= 15.93 Transcript Type= NA
chr14	60249268	60299087	60249268	60299087	+	ENST00000395076.8@PPM1A	ENST00000395076.8	protein_coding	60249268,60282684,60285624,60289806,60291397,60292453	60249677,60283537,60285741,60289914,60291454,60299087	Gene ID= ENSG00000100614.17 TPM= 56.95 Transcript Type= protein_coding
chr14	60657003	60659010	60657003	60659010	+	transcript1754.chr14.nnic@NA	transcript1754.chr14.nnic	NA	60657003	60659010	Gene ID= novel_gene_chr14_1755 TPM= 2.9 Transcript Type= NA
chr14	60734776	60968678	60734776	60968678	+	ENST00000539616.6@MNAT1	ENST00000539616.6	protein_coding	60734776,60796217,60798087,60808325,60811987,60879714,60968229	60734951,60796369,60798160,60808428,60812127,60879835,60968678	Gene ID= ENSG00000020426.10 TPM= 2.9 Transcript Type= protein_coding
chr14	60971451	60981358	60971451	60981358	-	ENST00000261249.6@TRMT5	ENST00000261249.6	protein_coding	60980963,60979231,60977514,60975475,60971451	60981358,60979886,60977638,60976126,60975194	Gene ID= ENSG00000126814.6 TPM= 4.83 Transcript Type= protein_coding
chr14	60975011	60981163	60975011	60981163	-	transcript1779.chr14.nic@TRMT5	transcript1779.chr14.nic	protein_coding	60981024,60979231,60977514,60975475,60975011	60981163,60979886,60977638,60976126,60975194	Gene ID= ENSG00000126814.6 TPM= 3.86 Transcript Type= NA
chr14	61277983	61281119	61277983	61281119	-	transcript1784.chr14.nnic@NA	transcript1784.chr14.nnic	NA	61277983	61281119	Gene ID= novel_gene_chr14_1785 TPM= 2.9 Transcript Type= NA
chr14	61321717	61550976	61321717	61550976	+	ENST00000332981.9@PRKCH	ENST00000332981.9	protein_coding	61321717,61391225,61443111,61445692,61449164,61450842,61453226,61457176,61457506,61485502,61529075,61530407,61547743,61549685	61322464,61391288,61443261,61445726,61449252,61450971,61453353,61457319,61457679,61485656,61529213,61530595,61547886,61550976	Gene ID= ENSG00000027075.14 TPM= 11.58 Transcript Type= protein_coding
chr14	61695540	61748258	61695540	61748258	+	ENST00000394997.5@HIF1A	ENST00000394997.5	protein_coding	61695540,61720379,61721509,61721739,61726706,61727453,61732418,61734138,61736889,61738087,61740505,61740755,61744705,61745691,61746934	61695839,61720572,61721654,61721823,61726818,61727655,61732524,61734285,61737109,61738373,61740627,61741188,61744813,61745817,61748258	Gene ID= ENSG00000100644.16 TPM= 6.76 Transcript Type= protein_coding
chr14	61762357	61796428	61762357	61796428	+	ENST00000216294.4@SNAPC1	ENST00000216294.4	protein_coding	61762357,61766876,61767212,61768636,61776095,61778072,61778848,61782247,61792807,61794949	61762588,61767035,61767352,61768740,61776253,61778140,61778910,61782397,61792902,61796428	Gene ID= ENSG00000023608.4 TPM= 4.83 Transcript Type= protein_coding
chr14	63382056	63543401	63382056	63543401	-	transcript1812.chr14.nic@PPP2R5E	transcript1812.chr14.nic	protein_coding	63542779,63539529,63453689,63421993,63415140,63396586,63395226,63393820,63391972,63391817,63389612,63384444,63382056	63543401,63539692,63453885,63422094,63415232,63396716,63395285,63393928,63392025,63391867,63389731,63384571,63382157	Gene ID= ENSG00000154001.13 TPM= 4.83 Transcript Type= NA
chr14	63597417	63641873	63597417	63641873	-	transcript1814.chr14.nnic@WDR89	transcript1814.chr14.nnic	protein_coding	63641804,63629270,63624928,63602178,63597417	63641873,63629621,63625033,63602307,63599973	Gene ID= ENSG00000140006.11 TPM= 1.93 Transcript Type= NA
chr14	63597426	63641873	63597426	63641873	-	transcript1816.chr14.nnic@WDR89	transcript1816.chr14.nnic	protein_coding	63641804,63629270,63624928,63597426	63641873,63629621,63625033,63599973	Gene ID= ENSG00000140006.11 TPM= 1.93 Transcript Type= NA
chr14	63597042	63641872	63597042	63641872	-	transcript1817.chr14.nnic@WDR89	transcript1817.chr14.nnic	protein_coding	63641804,63624928,63597042	63641872,63625033,63599973	Gene ID= ENSG00000140006.11 TPM= 5.79 Transcript Type= NA
chr14	63684216	63728056	63684216	63728056	-	transcript1828.chr14.nnic@SGPP1	transcript1828.chr14.nnic	protein_coding	63727261,63684216	63728056,63686656	Gene ID= ENSG00000126821.7 TPM= 2.9 Transcript Type= NA
chr14	63684214	63728039	63684214	63728039	-	ENST00000247225.6@SGPP1	ENST00000247225.6	protein_coding	63727261,63698569,63684214	63728039,63698658,63686656	Gene ID= ENSG00000126821.7 TPM= 17.38 Transcript Type= protein_coding
chr14	63852958	63995140	63852958	63995140	+	transcript1830.chr14.nic@SYNE2	transcript1830.chr14.nic	protein_coding	63852958,63909098,63940614,63941695,63941885,63942051,63949825,63954719,63961525,63963899,63967709,63976563,63977905,63978852,63980654,63980986,63982630,63983737,63986456,63990411,63990942,63993835,63995044	63853143,63909227,63940675,63941790,63941962,63942143,63950006,63954915,63961625,63964000,63967846,63976727,63978017,63979014,63980732,63981173,63982794,63983886,63986617,63990569,63991115,63993969,63995140	Gene ID= ENSG00000054654.16 TPM= 2.41 Transcript Type= NA
chr14	63853412	63995140	63853412	63995140	+	transcript1832.chr14.nnic@SYNE2	transcript1832.chr14.nnic	protein_coding	63853412,63909098,63940614,63941695,63941885,63942051,63949825,63954719,63961525,63963899,63967709,63976563,63977905,63978852,63980654,63980986,63982630,63983737,63986456,63990411,63990942,63993835,63995044	63853654,63909227,63940675,63941790,63941962,63942143,63950006,63954915,63961625,63964000,63967846,63976727,63978017,63979014,63980732,63981173,63982794,63983886,63986617,63990569,63991115,63993969,63995140	Gene ID= ENSG00000054654.16 TPM= 3.38 Transcript Type= NA
chr14	64214144	64226432	64214144	64226432	+	ENST00000458046.6@SYNE2	ENST00000458046.6	protein_coding	64214144,64215286,64216248,64218398,64219208,64220437,64221534,64223189,64224461,64224996,64225319	64214470,64215354,64216387,64218512,64219410,64220637,64221704,64223380,64224547,64225045,64226432	Gene ID= ENSG00000054654.16 TPM= 11.1 Transcript Type= protein_coding
chr14	64214144	64226433	64214144	64226433	+	transcript1839.chr14.nic@SYNE2	transcript1839.chr14.nic	protein_coding	64214144,64215286,64216248,64218398,64219208,64220437,64221576,64223189,64224461,64224996,64225319	64214470,64215354,64216387,64218512,64219410,64220637,64221704,64223380,64224547,64225045,64226433	Gene ID= ENSG00000054654.16 TPM= 15.93 Transcript Type= NA
chr14	64388031	64463457	64388031	64463457	+	ENST00000545908.5@MTHFD1	ENST00000545908.5	protein_coding	64388031,64400793,64411090,64412472,64415358,64415639,64417888,64419814,64424804,64425730,64426019,64427337,64430184,64431532,64431787,64435569,64439096,64440126,64441385,64442054,64442263,64444693,64448217,64449445,64453754,64454723,64459759	64388468,64400877,64411149,64412525,64415494,64415739,64418024,64419925,64424931,64425827,64426192,64427473,64430230,64431639,64431861,64435671,64439172,64440266,64441453,64442165,64442402,64444734,64448317,64449622,64453861,64454875,64463457	Gene ID= ENSG00000100714.15 TPM= 3.86 Transcript Type= protein_coding
chr14	64388350	64460004	64388350	64460004	+	ENST00000216605.12@MTHFD1	ENST00000216605.12	protein_coding	64388350,64400793,64411090,64412472,64415358,64415639,64417888,64419814,64424804,64425730,64426019,64427337,64430184,64431532,64431787,64435569,64439096,64440126,64441385,64442054,64442263,64444693,64448217,64449445,64453754,64454723,64458214,64459759	64388468,64400877,64411149,64412525,64415494,64415739,64418024,64419925,64424931,64425827,64426192,64427473,64430230,64431639,64431861,64435671,64439172,64440266,64441453,64442165,64442402,64444734,64448317,64449622,64453861,64454875,64458307,64460004	Gene ID= ENSG00000100714.15 TPM= 173.76 Transcript Type= protein_coding
chr14	64447455	64503836	64447455	64503836	-	transcript1865.chr14.nic@ZBTB25	transcript1865.chr14.nic	protein_coding	64503661,64490361,64447455	64503836,64490540,64449638	Gene ID= ENSG00000089775.11 TPM= 3.86 Transcript Type= NA
chr14	64504796	64523898	64504796	64523898	+	transcript1869.chr14.nic@ZBTB1	transcript1869.chr14.nic	protein_coding	64504796,64521487	64504946,64523898	Gene ID= ENSG00000126804.13 TPM= 1.93 Transcript Type= NA
chr14	64503900	64523953	64503900	64523953	+	transcript1870.chr14.nic@ZBTB1	transcript1870.chr14.nic	protein_coding	64503900,64521487	64504946,64523953	Gene ID= ENSG00000126804.13 TPM= 8.69 Transcript Type= NA
chr14	64504745	64524642	64504745	64524642	+	transcript1871.chr14.nic@ZBTB1	transcript1871.chr14.nic	protein_coding	64504745,64521487	64504946,64524642	Gene ID= ENSG00000126804.13 TPM= 2.41 Transcript Type= NA
chr14	64504745	64524943	64504745	64524943	+	transcript1872.chr14.nic@ZBTB1	transcript1872.chr14.nic	protein_coding	64504745,64521487	64504946,64524943	Gene ID= ENSG00000126804.13 TPM= 2.41 Transcript Type= NA
chr14	64504574	64533690	64504574	64533690	+	ENST00000358738.3@ZBTB1	ENST00000358738.3	protein_coding	64504574,64521487,64531861	64504946,64523402,64533690	Gene ID= ENSG00000126804.13 TPM= 1.93 Transcript Type= protein_coding
chr14	64540468	64543234	64540468	64543234	+	ENST00000247207.6@HSPA2	ENST00000247207.6	protein_coding	64540468	64543234	Gene ID= ENSG00000126803.9 TPM= 286.7 Transcript Type= protein_coding
chr14	64741918	64744343	64741918	64744343	+	transcript1878.chr14.nic@PLEKHG3	transcript1878.chr14.nic	protein_coding	64741918,64742982	64742455,64744343	Gene ID= ENSG00000126822.16 TPM= 1.93 Transcript Type= NA
chr14	64739995	64743765	64739995	64743765	-	transcript1879.chr14.nnic@NA	transcript1879.chr14.nnic	NA	64739995	64743765	Gene ID= novel_gene_chr14_1880 TPM= 2.9 Transcript Type= NA
chr14	64766399	64879967	64766399	64879967	-	transcript1888.chr14.nic@SPTB	transcript1888.chr14.nic	protein_coding	64879792,64822947,64804939,64803607,64802226,64801754,64801285,64800756,64799747,64797729,64796557,64795337,64794467,64792997,64791719,64786404,64785749,64785537,64784247,64782290,64779725,64779157,64775125,64774397,64773220,64772580,64770885,64769590,64769034,64767663,64767303,64766399	64879967,64823145,64805090,64803780,64802317,64801834,64801400,64800868,64799934,64797846,64796715,64795639,64794617,64793867,64791856,64787160,64785951,64785627,64784393,64782553,64779931,64779246,64775403,64774527,64773424,64772954,64771129,64769728,64769118,64767859,64767352,64766801	Gene ID= ENSG00000070182.19 TPM= 77.71 Transcript Type= NA
chr14	64766399	64823127	64766399	64823127	-	ENST00000389721.9@SPTB	ENST00000389721.9	protein_coding	64822947,64804939,64803607,64802226,64801754,64801285,64800756,64799747,64797729,64796557,64795337,64794467,64792997,64791719,64786404,64785749,64785537,64784247,64782290,64779725,64779157,64775125,64774397,64773220,64772580,64770885,64769590,64769034,64767663,64767303,64766399	64823127,64805090,64803780,64802317,64801834,64801400,64800868,64799934,64797846,64796715,64795639,64794617,64793867,64791856,64787160,64785951,64785627,64784393,64782553,64779931,64779246,64775403,64774527,64773424,64772954,64771129,64769728,64769118,64767859,64767352,64766801	Gene ID= ENSG00000070182.19 TPM= 137.56 Transcript Type= protein_coding
chr14	64746650	64746903	64746650	64746903	+	transcript1899.chr14.nnic@NA	transcript1899.chr14.nnic	NA	64746650	64746903	Gene ID= novel_gene_chr14_1900 TPM= 7.72 Transcript Type= NA
chr14	64747026	64748987	64747026	64748987	+	transcript1905.chr14.nnic@NA	transcript1905.chr14.nnic	NA	64747026	64748987	Gene ID= novel_gene_chr14_1906 TPM= 20.27 Transcript Type= NA
chr14	64789541	64791589	64789541	64791589	+	transcript1901.chr14.nnic@NA	transcript1901.chr14.nnic	NA	64789541	64791589	Gene ID= novel_gene_chr14_1902 TPM= 13.51 Transcript Type= NA
chr14	64914361	64934385	64914361	64934385	+	ENST00000549115.5@CHURC1	ENST00000549115.5	protein_coding	64914361,64923991,64926010,64932138	64914534,64924126,64926080,64934385	Gene ID= ENSG00000258289.8 TPM= 69.5 Transcript Type= protein_coding
chr14	64914415	64932320	64914415	64932320	+	ENST00000548752.6@CHURC1	ENST00000548752.6	protein_coding	64914415,64923991,64932138	64914534,64924126,64932320	Gene ID= ENSG00000258289.8 TPM= 5.79 Transcript Type= protein_coding
chr14	64945814	64972157	64945814	64972157	-	ENST00000267512.9@RAB15	ENST00000267512.9	protein_coding	64971953,64952511,64951603,64950943,64950325,64948668,64945814	64972157,64952571,64951663,64951151,64950414,64948733,64948512	Gene ID= ENSG00000139998.14 TPM= 21.24 Transcript Type= protein_coding
chr14	64945816	64972414	64945816	64972414	-	ENST00000533601.6@RAB15	ENST00000533601.6	protein_coding	64971953,64952511,64951603,64951074,64950325,64948668,64945816	64972414,64952571,64951663,64951151,64950414,64948733,64948512	Gene ID= ENSG00000139998.14 TPM= 17.38 Transcript Type= protein_coding
chr14	65025239	65062652	65025239	65062652	+	transcript1925.chr14.nnic@FNTB	transcript1925.chr14.nnic	protein_coding	65025239,65027453,65027698,65032610,65040790,65044311,65053238,65054575,65061181	65025304,65027599,65027781,65032696,65040919,65044443,65053349,65054689,65062652	Gene ID= ENSG00000257365.7 TPM= 9.65 Transcript Type= NA
chr14	65032506	65062652	65032506	65062652	+	transcript1927.chr14.nic@FNTB	transcript1927.chr14.nic	protein_coding	65032506,65040790,65044311,65053238,65054575,65061181	65032696,65040919,65044443,65053349,65054689,65062652	Gene ID= ENSG00000257365.7 TPM= 14.48 Transcript Type= NA
chr14	65075124	65102504	65075124	65102504	-	ENST00000358402.8@MAX	ENST00000358402.8	protein_coding	65102304,65093708,65077913,65075124	65102504,65093815,65078036,65076663	Gene ID= ENSG00000125952.18 TPM= 2.58 Transcript Type= protein_coding
chr14	65005557	65021755	65005557	65021755	-	transcript1941.chr14.nnic@MAX	transcript1941.chr14.nnic	protein_coding	65021467,65005557	65021755,65006284	Gene ID= ENSG00000125952.18 TPM= 1.93 Transcript Type= NA
chr14	65075127	65102519	65075127	65102519	-	ENST00000394606.6@MAX	ENST00000394606.6	protein_coding	65102304,65101546,65093708,65077913,65077344,65075127	65102519,65101572,65093815,65078036,65077428,65076663	Gene ID= ENSG00000125952.18 TPM= 3.54 Transcript Type= nonsense_mediated_decay
chr14	65075544	65102470	65075544	65102470	-	ENST00000358664.8@MAX	ENST00000358664.8	protein_coding	65102304,65101546,65093708,65077913,65075544	65102470,65101572,65093815,65078036,65076663	Gene ID= ENSG00000125952.18 TPM= 2.58 Transcript Type= protein_coding
chr14	65083744	65102509	65083744	65102509	-	ENST00000246163.2@MAX	ENST00000246163.2	protein_coding	65102304,65101546,65093708,65083744	65102509,65101572,65093815,65084299	Gene ID= ENSG00000125952.18 TPM= 6.76 Transcript Type= protein_coding
chr14	65410592	65744121	65410592	65744121	+	ENST00000360689.9@FUT8	ENST00000360689.9	protein_coding	65410592,65455621,65561337,65615978,65616211,65629492,65669243,65721775,65724147,65733231,65742093	65411993,65455718,65561766,65616093,65616373,65629606,65669480,65722021,65724323,65733381,65744121	Gene ID= ENSG00000033170.16 TPM= 1.93 Transcript Type= protein_coding
chr14	66507407	67181803	66507407	67181803	+	ENST00000478722.5@GPHN	ENST00000478722.5	protein_coding	66507407,66681107,66776464,66824474,66879939,66916003,66922666,66924194,66965191,67023633,67058649,67088983,67100856,67110140,67111861,67113018,67122256,67143362,67159415,67165162,67168933,67179578,67180804	66508591,66681185,66776521,66824566,66880033,66916069,66922938,66924292,66965325,67023675,67058786,67089075,67100911,67110259,67111919,67113171,67122377,67143449,67159488,67165226,67169036,67179674,67181803	Gene ID= ENSG00000171723.15 TPM= 27.03 Transcript Type= protein_coding
chr14	67241109	67335819	67241109	67335819	+	ENST00000261681.8@MPP5	ENST00000261681.8	protein_coding	67241109,67269701,67279018,67292511,67301389,67301972,67302410,67303522,67312527,67316832,67317408,67320230,67321057,67323702,67332780	67241533,67269783,67279537,67292719,67301466,67302118,67302571,67303599,67312710,67316903,67317479,67320397,67321259,67323812,67335819	Gene ID= ENSG00000072415.8 TPM= 11.58 Transcript Type= protein_coding
chr14	67338071	67360249	67338071	67360249	-	ENST00000216442.11@ATP6V1D	ENST00000216442.11	protein_coding	67359658,67352923,67350611,67349037,67347409,67345768,67343372,67340440,67338071	67360249,67353040,67350690,67349104,67347453,67345871,67343438,67340518,67338762	Gene ID= ENSG00000100554.11 TPM= 29.92 Transcript Type= protein_coding
chr14	67359997	67386516	67359997	67386516	+	ENST00000256383.8@EIF2S1	ENST00000256383.8	protein_coding	67359997,67364767,67374468,67376439,67380659,67381593,67382447,67383315	67360456,67365008,67374547,67376590,67380765,67381690,67382590,67386516	Gene ID= ENSG00000134001.12 TPM= 111.98 Transcript Type= protein_coding
chr14	67619798	67651720	67619798	67651720	+	ENST00000261783.3@ARG2	ENST00000261783.3	protein_coding	67619798,67620894,67642186,67645643,67646644,67646921,67648047,67650715	67620088,67620966,67642363,67645802,67646738,67647025,67648183,67651720	Gene ID= ENSG00000081181.7 TPM= 1.93 Transcript Type= protein_coding
chr14	67646899	67651177	67646899	67651177	-	transcript1989.chr14.nnic@NA	transcript1989.chr14.nnic	NA	67646899	67651177	Gene ID= novel_gene_chr14_1990 TPM= 2.9 Transcript Type= NA
chr14	67651149	67674612	67651149	67674612	-	transcript1986.chr14.nic@VTI1B	transcript1986.chr14.nic	protein_coding	67674375,67659731,67656416,67653437,67651149	67674612,67659922,67656589,67653498,67651481	Gene ID= ENSG00000100568.10 TPM= 4.34 Transcript Type= NA
chr14	67651152	67674899	67651152	67674899	-	transcript1987.chr14.nic@VTI1B	transcript1987.chr14.nic	protein_coding	67674375,67662477,67659731,67656416,67651152	67674899,67662535,67659922,67656589,67651481	Gene ID= ENSG00000100568.10 TPM= 3.38 Transcript Type= NA
chr14	67746520	67816589	67746520	67816589	-	ENST00000347230.8@ZFYVE26	ENST00000347230.8	protein_coding	67816534,67815770,67813986,67809200,67807398,67806545,67805454,67805217,67804101,67802079,67798014,67797672,67794171,67793608,67790572,67789335,67786114,67785858,67785059,67784334,67782780,67781333,67780241,67778126,67777559,67775860,67775016,67772047,67769594,67768517,67767704,67766227,67762672,67762203,67761366,67755948,67755051,67754071,67753707,67752344,67751052,67746520	67816589,67816046,67814064,67809289,67807920,67806675,67805618,67805305,67804264,67802282,67798622,67797755,67794239,67793759,67790773,67789598,67786233,67786022,67785277,67784436,67783525,67781529,67780345,67778248,67777735,67776106,67775114,67772210,67769730,67768548,67767840,67766447,67762819,67762412,67761584,67756145,67755250,67754212,67753766,67752526,67751096,67748639	Gene ID= ENSG00000072121.15 TPM= 4.83 Transcript Type= protein_coding
chr14	67748092	67782992	67748092	67782992	-	transcript1997.chr14.nnic@ZFYVE26	transcript1997.chr14.nnic	protein_coding	67782780,67781333,67780241,67778126,67777559,67775860,67775019,67768517,67767704,67766227,67762672,67762203,67761366,67755948,67755051,67753707,67752344,67751052,67748092	67782992,67781529,67780345,67778248,67777735,67776106,67775114,67768551,67767840,67766447,67762819,67762412,67761584,67756145,67755250,67753766,67752526,67751096,67748639	Gene ID= ENSG00000072121.15 TPM= 1.93 Transcript Type= NA
chr14	68788605	68794736	68788605	68794736	-	ENST00000336440.3@ZFP36L1	ENST00000336440.3	protein_coding	68792882,68789527,68788605	68794736,68790492,68788809	Gene ID= ENSG00000185650.9 TPM= 7.72 Transcript Type= protein_coding
chr14	68787662	68793240	68787662	68793240	-	ENST00000439696.2@ZFP36L1	ENST00000439696.2	protein_coding	68792882,68787662	68793240,68790492	Gene ID= ENSG00000185650.9 TPM= 49.23 Transcript Type= protein_coding
chr14	68794740	68796081	68794740	68796081	-	transcript2011.chr14.nnic@NA	transcript2011.chr14.nnic	NA	68794740	68796081	Gene ID= novel_gene_chr14_2012 TPM= 2.9 Transcript Type= NA
chr14	68874143	68979440	68874143	68979440	-	ENST00000193403.10@ACTN1	ENST00000193403.10	protein_coding	68978952,68925558,68921006,68912156,68909955,68909318,68904655,68902477,68893655,68892053,68890139,68885425,68884775,68884168,68882873,68882458,68880810,68879962,68878989,68877082,68874143	68979440,68925672,68921125,68912242,68910042,68909396,68904736,68902562,68893747,68892283,68890286,68885575,68884883,68884308,68883055,68882592,68880989,68880108,68879069,68877240,68875017	Gene ID= ENSG00000072110.13 TPM= 5.47 Transcript Type= protein_coding
chr14	68874323	68979239	68874323	68979239	-	ENST00000394419.8@ACTN1	ENST00000394419.8	protein_coding	68978952,68925558,68921006,68912156,68909955,68909318,68904655,68902477,68893655,68892053,68890139,68885425,68884775,68884168,68882873,68882458,68880810,68879962,68878989,68878458,68877082,68874323	68979239,68925672,68921125,68912242,68910042,68909396,68904736,68902562,68893747,68892283,68890286,68885575,68884883,68884308,68883055,68882592,68880989,68880108,68879069,68878523,68877240,68875017	Gene ID= ENSG00000072110.13 TPM= 1.61 Transcript Type= protein_coding
chr14	68874686	68979262	68874686	68979262	-	ENST00000438964.6@ACTN1	ENST00000438964.6	protein_coding	68978952,68925558,68921006,68912156,68909955,68909318,68904655,68902477,68893655,68892053,68890139,68885425,68884775,68884168,68882873,68882458,68880810,68879962,68878458,68877082,68874686	68979262,68925672,68921125,68912242,68910042,68909396,68904736,68902562,68893747,68892283,68890286,68885575,68884883,68884308,68883055,68882592,68880989,68880108,68878523,68877240,68875017	Gene ID= ENSG00000072110.13 TPM= 2.58 Transcript Type= protein_coding
chr14	69053742	69153026	69053742	69153026	-	transcript2027.chr14.nic@DCAF5	transcript2027.chr14.nic	protein_coding	69152944,69122217,69119194,69118139,69116366,69091674,69075345,69062384,69053742	69153026,69122360,69119230,69118278,69116495,69091887,69075411,69062511,69055611	Gene ID= ENSG00000139990.17 TPM= 4.66 Transcript Type= NA
chr14	69053825	69153003	69053825	69153003	-	ENST00000557386.5@DCAF5	ENST00000557386.5	protein_coding	69152765,69122217,69119194,69118139,69116366,69091674,69075345,69062384,69053825	69153003,69122360,69119230,69118275,69116495,69091887,69075411,69062511,69055611	Gene ID= ENSG00000139990.17 TPM= 4.18 Transcript Type= protein_coding
chr14	69052449	69054746	69052449	69054746	-	transcript2034.chr14.nnic@NA	transcript2034.chr14.nnic	NA	69052449	69054746	Gene ID= novel_gene_chr14_2035 TPM= 1.93 Transcript Type= NA
chr14	69191498	69242356	69191498	69242356	+	transcript2037.chr14.nic@EXD2	transcript2037.chr14.nic	protein_coding	69191498,69203917,69209424,69228816,69230472,69234700,69236046,69236407,69237575,69240884	69191591,69204000,69209803,69229072,69230598,69235031,69236152,69236542,69237931,69242356	Gene ID= ENSG00000081177.18 TPM= 3.86 Transcript Type= NA
chr14	69259964	69357033	69259964	69357033	+	ENST00000337827.8@GALNT16	ENST00000337827.8	protein_coding	69259964,69320711,69324692,69325337,69325962,69328450,69331464,69333085,69333497,69338651,69339527,69341681,69347040,69347877,69352031,69353332	69260467,69320868,69324790,69325404,69326027,69328571,69331551,69333169,69333600,69338777,69339619,69341764,69347181,69348002,69352170,69357033	Gene ID= ENSG00000100626.16 TPM= 1.93 Transcript Type= protein_coding
chr14	69380128	69398334	69380128	69398334	-	transcript2046.chr14.nnic@ERH	transcript2046.chr14.nnic	protein_coding	69398231,69394825,69386963,69380577,69380128	69398334,69394912,69387083,69380640,69380482	Gene ID= ENSG00000100632.10 TPM= 1.93 Transcript Type= NA
chr14	69380123	69398627	69380123	69398627	-	ENST00000557016.5@ERH	ENST00000557016.5	protein_coding	69398231,69394825,69386963,69380123	69398627,69394912,69387083,69380640	Gene ID= ENSG00000100632.10 TPM= 24.13 Transcript Type= protein_coding
chr14	69398692	69460551	69398692	69460551	+	ENST00000336643.9@SLC39A9	ENST00000336643.9	protein_coding	69398692,69424094,69442069,69453241,69454812,69455732,69458363	69399465,69424202,69442266,69453309,69454897,69455866,69460551	Gene ID= ENSG00000029364.11 TPM= 7.72 Transcript Type= protein_coding
chr14	69611596	69715142	69611596	69715142	+	ENST00000342745.4@SUSD6	ENST00000342745.4	protein_coding	69611596,69658513,69703395,69704604,69708677,69710954	69611828,69658713,69703592,69704742,69709104,69715142	Gene ID= ENSG00000100647.7 TPM= 22.2 Transcript Type= protein_coding
chr14	69767112	69772004	69767112	69772004	+	transcript2061.chr14.nic@SRSF5	transcript2061.chr14.nic	protein_coding	69767112,69768138,69768604,69768798,69769182,69769511,69770467,69770995,69771194	69767255,69768282,69768674,69768896,69769251,69770042,69770540,69771105,69772004	Gene ID= ENSG00000100650.15 TPM= 2.55 Transcript Type= NA
chr14	69726900	69772004	69726900	69772004	+	ENST00000553521.5@SRSF5	ENST00000553521.5	protein_coding	69726900,69766114,69768138,69768604,69768798,69769182,69770467,69770995,69771194	69727191,69767255,69768282,69768674,69768896,69769251,69770540,69771105,69772004	Gene ID= ENSG00000100650.15 TPM= 33.44 Transcript Type= protein_coding
chr14	69767093	69771973	69767093	69771973	+	ENST00000394366.6@SRSF5	ENST00000394366.6	protein_coding	69767093,69768138,69768604,69768798,69769182,69770467,69770995,69771194	69767380,69768282,69768674,69768896,69769251,69770540,69771105,69771973	Gene ID= ENSG00000100650.15 TPM= 1.1 Transcript Type= protein_coding
chr14	69767112	69772004	69767112	69772004	+	transcript2069.chr14.nic@SRSF5	transcript2069.chr14.nic	protein_coding	69767112,69768138,69768604,69768798,69769182,69770995,69771194	69767255,69768282,69768674,69768896,69770540,69771105,69772004	Gene ID= ENSG00000100650.15 TPM= 22.67 Transcript Type= NA
chr14	69767093	69772004	69767093	69772004	+	ENST00000554465.5@SRSF5	ENST00000554465.5	protein_coding	69767093,69768138,69768604,69768798,69770995,69771194	69767255,69768282,69768674,69770540,69771105,69772004	Gene ID= ENSG00000100650.15 TPM= 8.67 Transcript Type= retained_intron
chr14	69767124	69771991	69767124	69771991	+	ENST00000557154.5@SRSF5	ENST00000557154.5	protein_coding	69767124,69768138,69768604,69768798,69769182,69770467,69770995,69771194	69767255,69768282,69768674,69768896,69769251,69770540,69771105,69771991	Gene ID= ENSG00000100650.15 TPM= 1.1 Transcript Type= protein_coding
chr14	70044217	70189070	70044217	70189070	-	ENST00000381269.6@SLC8A3	ENST00000381269.6	protein_coding	70188379,70166639,70060836,70055796,70051990,70051008,70048767,70044217	70189070,70168484,70060939,70055813,70052114,70051107,70049042,70046323	Gene ID= ENSG00000100678.18 TPM= 11.99 Transcript Type= protein_coding
chr14	70044220	70189070	70044220	70189070	-	ENST00000357887.7@SLC8A3	ENST00000357887.7	protein_coding	70188379,70166639,70063823,70055796,70051990,70051008,70048767,70044220	70189070,70168484,70063929,70055813,70052105,70051107,70049042,70046323	Gene ID= ENSG00000100678.18 TPM= 7.48 Transcript Type= protein_coding
chr14	70044217	70189070	70044217	70189070	-	ENST00000356921.6@SLC8A3	ENST00000356921.6	protein_coding	70188379,70166639,70060836,70051990,70051008,70048767,70044217	70189070,70168484,70060939,70052114,70051107,70049042,70046323	Gene ID= ENSG00000100678.18 TPM= 11.02 Transcript Type= protein_coding
chr14	70044217	70189070	70044217	70189070	-	ENST00000494208.5@SLC8A3	ENST00000494208.5	protein_coding	70188379,70166639,70051990,70051008,70048767,70044217	70189070,70168484,70052114,70051107,70049042,70046323	Gene ID= ENSG00000100678.18 TPM= 9.09 Transcript Type= nonsense_mediated_decay
chr14	70325081	70359731	70325081	70359731	-	ENST00000389912.6@COX16	ENST00000389912.6	protein_coding	70359519,70342658,70329174,70325081	70359731,70342729,70329236,70326449	Gene ID= ENSG00000133983.14 TPM= 5.79 Transcript Type= protein_coding
chr14	70326068	70359727	70326068	70359727	-	transcript2086.chr14.nnic@SYNJ2BP-COX16	transcript2086.chr14.nnic	protein_coding	70359519,70353136,70342658,70329174,70326068	70359727,70353252,70342729,70329236,70326449	Gene ID= ENSG00000258644.5 TPM= 5.79 Transcript Type= NA
chr14	70372147	70417091	70372147	70417091	-	transcript2094.chr14.nnic@SYNJ2BP-COX16	transcript2094.chr14.nnic	protein_coding	70416900,70388470,70381148,70375676,70372147	70417091,70388606,70381198,70375771,70373131	Gene ID= ENSG00000258644.5 TPM= 5.79 Transcript Type= NA
chr14	70366496	70417045	70366496	70417045	-	ENST00000256366.5@SYNJ2BP	ENST00000256366.5	protein_coding	70416900,70388470,70375676,70366496	70417045,70388606,70375771,70373131	Gene ID= ENSG00000213463.4 TPM= 3.86 Transcript Type= protein_coding
chr14	70641787	70675360	70641787	70675360	+	ENST00000256367.2@TTC9	ENST00000256367.2	protein_coding	70641787,70667564,70671076	70642535,70667746,70675360	Gene ID= ENSG00000133985.2 TPM= 5.79 Transcript Type= protein_coding
chr14	72609037	72612591	72609037	72612591	-	transcript2110.chr14.nnic@NA	transcript2110.chr14.nnic	NA	72609037	72612591	Gene ID= novel_gene_chr14_2111 TPM= 1.93 Transcript Type= NA
chr14	72661043	72894116	72661043	72894116	-	ENST00000614862.4@DPF3	ENST00000614862.4	protein_coding	72894057,72879804,72771733,72753264,72731807,72723633,72714423,72693076,72674240,72669952,72661043	72894116,72879947,72771893,72753371,72731934,72723728,72714501,72693213,72674368,72671338,72662833	Gene ID= ENSG00000205683.11 TPM= 1.93 Transcript Type= protein_coding
chr14	72661876	72894101	72661876	72894101	-	ENST00000381216.8@DPF3	ENST00000381216.8	protein_coding	72894057,72771733,72753264,72731807,72723633,72714423,72693076,72674240,72669952,72661876	72894101,72771893,72753371,72731934,72723728,72714501,72693213,72674368,72671338,72662833	Gene ID= ENSG00000205683.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr14	72926462	72959644	72926462	72959644	+	transcript2118.chr14.nic@DCAF4	transcript2118.chr14.nic	protein_coding	72926462,72937971,72939802,72940220,72941745,72942994,72945884,72947142,72951798,72954161,72954386,72955523,72956386,72958612	72926543,72938070,72939902,72940377,72941824,72943096,72946027,72947191,72951877,72954262,72954483,72955696,72956500,72959644	Gene ID= ENSG00000119599.16 TPM= 6.76 Transcript Type= NA
chr14	72926487	72959644	72926487	72959644	+	ENST00000555042.5@DCAF4	ENST00000555042.5	protein_coding	72926487,72937971,72939802,72940220,72941745,72942994,72945884,72947142,72951798,72954161,72954386,72955523,72956386,72958612	72926543,72938070,72939902,72940377,72941824,72943096,72946027,72947191,72951877,72954262,72954462,72955696,72956500,72959644	Gene ID= ENSG00000119599.16 TPM= 7.72 Transcript Type= protein_coding
chr14	72969452	73027212	72969452	73027212	-	ENST00000556143.5@ZFYVE1	ENST00000556143.5	protein_coding	73026926,73024026,72997811,72993143,72981789,72978861,72978137,72977927,72975551,72974779,72974080,72969452	73027212,73024942,72998315,72993357,72981895,72978969,72978234,72978044,72975721,72974959,72974193,72971114	Gene ID= ENSG00000165861.13 TPM= 29.92 Transcript Type= protein_coding
chr14	73058436	73123898	73058436	73123898	+	ENST00000261973.11@RBM25	ENST00000261973.11	protein_coding	73058436,73071627,73076319,73077369,73083494,73088001,73096915,73099380,73099667,73103192,73105859,73106196,73107826,73109342,73110831,73111528,73112152,73114286,73119713	73058705,73071747,73076368,73077536,73083551,73088161,73097100,73099433,73099750,73103478,73106081,73106285,73107899,73109492,73111155,73111802,73112250,73114333,73123898	Gene ID= ENSG00000119707.13 TPM= 4.83 Transcript Type= protein_coding
chr14	73136442	73220401	73136442	73220401	+	transcript2140.chr14.nnic@PSEN1	transcript2140.chr14.nnic	protein_coding	73136442,73147795,73147967,73170797,73173541,73186853,73192644,73198031,73206386,73211769,73217126,73219134	73136583,73147876,73148094,73171047,73173707,73186920,73192864,73198129,73206472,73211942,73217244,73220401	Gene ID= ENSG00000080815.18 TPM= 2.9 Transcript Type= NA
chr14	73136447	73220401	73136447	73220401	+	ENST00000357710.8@PSEN1	ENST00000357710.8	protein_coding	73136447,73147795,73147967,73170797,73173566,73186853,73192644,73198031,73206386,73211769,73217126,73219134	73136583,73147876,73148094,73171047,73173707,73186920,73192864,73198129,73206472,73211942,73217244,73220401	Gene ID= ENSG00000080815.18 TPM= 35.72 Transcript Type= protein_coding
chr14	73136447	73223691	73136447	73223691	+	ENST00000324501.9@PSEN1	ENST00000324501.9	protein_coding	73136447,73147795,73147967,73170797,73173566,73186853,73192644,73198031,73206386,73211769,73217126,73219134	73136583,73147876,73148106,73171047,73173707,73186920,73192864,73198129,73206472,73211942,73217244,73223691	Gene ID= ENSG00000080815.18 TPM= 4.83 Transcript Type= protein_coding
chr14	73136447	73174204	73136447	73174204	+	ENST00000394157.7@PSEN1	ENST00000394157.7	protein_coding	73136447,73147795,73147967,73170797,73173566	73136583,73147876,73148106,73171047,73174204	Gene ID= ENSG00000080815.18 TPM= 1.93 Transcript Type= protein_coding
chr14	73275107	73458617	73275107	73458617	-	ENST00000554546.5@NUMB	ENST00000554546.5	protein_coding	73458493,73409937,73366897,73355626,73323130,73297211,73292734,73287110,73284081,73282359,73275107	73458617,73410068,73366981,73355766,73323204,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 10.62 Transcript Type= protein_coding
chr14	73275216	73458589	73275216	73458589	-	transcript2157.chr14.nic@NUMB	transcript2157.chr14.nic	protein_coding	73458493,73409937,73355626,73323130,73297211,73292734,73287110,73284081,73282359,73275216	73458589,73410068,73355766,73323204,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 3.86 Transcript Type= NA
chr14	73275216	73458589	73275216	73458589	-	transcript2158.chr14.nic@NUMB	transcript2158.chr14.nic	protein_coding	73458493,73409937,73366897,73355626,73323130,73297211,73292734,73287110,73282359,73275216	73458589,73410068,73366981,73355766,73323204,73297285,73292874,73287314,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 1.93 Transcript Type= NA
chr14	73275673	73458580	73275673	73458580	-	ENST00000555394.5@NUMB	ENST00000555394.5	protein_coding	73458493,73409937,73366897,73355626,73323130,73316390,73297211,73292734,73287110,73284081,73282359,73275673	73458580,73410068,73366981,73355766,73323204,73316422,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 1.93 Transcript Type= protein_coding
chr14	73490964	73493392	73490964	73493392	+	ENST00000304061.7@RIOX1	ENST00000304061.7	protein_coding	73490964	73493392	Gene ID= ENSG00000170468.7 TPM= 7.72 Transcript Type= protein_coding
chr14	73537114	73543794	73537114	73543794	+	ENST00000311148.8@ACOT1	ENST00000311148.8	protein_coding	73537114,73541493,73543050	73537878,73541695,73543794	Gene ID= ENSG00000184227.7 TPM= 45.37 Transcript Type= protein_coding
chr14	73569059	73575653	73569059	73575653	+	ENST00000238651.9@ACOT2	ENST00000238651.9	protein_coding	73569059,73573388,73574908	73569883,73573590,73575653	Gene ID= ENSG00000119673.14 TPM= 44.4 Transcript Type= protein_coding
chr14	73569273	73575653	73569273	73575653	+	transcript2167.chr14.nic@ACOT2	transcript2167.chr14.nic	protein_coding	73569273,73573388,73574908	73569396,73573590,73575653	Gene ID= ENSG00000119673.14 TPM= 7.24 Transcript Type= NA
chr14	73569285	73575658	73569285	73575658	+	ENST00000613168.1@ACOT2	ENST00000613168.1	protein_coding	73569285,73573388,73574908	73569883,73573590,73575658	Gene ID= ENSG00000119673.14 TPM= 20.75 Transcript Type= protein_coding
chr14	73711783	73714372	73711783	73714372	-	ENST00000316836.4@PNMA1	ENST00000316836.4	protein_coding	73711783	73714372	Gene ID= ENSG00000176903.4 TPM= 47.3 Transcript Type= protein_coding
chr14	73752371	73757292	73752371	73757292	+	transcript2172.chr14.nnic@NA	transcript2172.chr14.nnic	NA	73752371	73757292	Gene ID= novel_gene_chr14_2173 TPM= 2.9 Transcript Type= NA
chr14	73851844	73885456	73851844	73885456	+	ENST00000555228.5@PTGR2	ENST00000555228.5	protein_coding	73851844,73858816,73860539,73874023,73876998,73879096,73880055,73881205,73882399,73884101	73852004,73858899,73860657,73874214,73877168,73879305,73880176,73881292,73882438,73885456	Gene ID= ENSG00000140043.11 TPM= 4.34 Transcript Type= protein_coding
chr14	73851947	73885459	73851947	73885459	+	ENST00000267568.8@PTGR2	ENST00000267568.8	protein_coding	73851947,73858816,73860539,73874023,73876998,73879096,73880055,73881205,73882399,73884101	73852120,73858899,73860657,73874214,73877168,73879305,73880176,73881292,73882438,73885459	Gene ID= ENSG00000140043.11 TPM= 4.34 Transcript Type= protein_coding
chr14	73886820	73932278	73886820	73932278	+	transcript2194.chr14.nic@ZNF410	transcript2194.chr14.nic	protein_coding	73886820,73892027,73893797,73896316,73898071,73903960,73904902,73909341,73920980,73922066,73923395,73924702,73931503	73886915,73892208,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73922206,73923522,73924819,73932278	Gene ID= ENSG00000119725.18 TPM= 3.86 Transcript Type= NA
chr14	73886859	73932100	73886859	73932100	+	transcript2195.chr14.nic@ZNF410	transcript2195.chr14.nic	protein_coding	73886859,73892027,73893797,73896316,73898071,73903960,73904902,73909341,73920980,73922066,73923395,73927107,73931503	73886915,73892208,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73922206,73923522,73927228,73932100	Gene ID= ENSG00000119725.18 TPM= 1.93 Transcript Type= NA
chr14	73886805	73932278	73886805	73932278	+	ENST00000324593.10@ZNF410	ENST00000324593.10	protein_coding	73886805,73892027,73893797,73896316,73898071,73903960,73904902,73909341,73920980,73923395,73931503	73886915,73892208,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73923522,73932278	Gene ID= ENSG00000119725.18 TPM= 4.83 Transcript Type= protein_coding
chr14	73932510	73950414	73932510	73950414	-	ENST00000286544.3@FAM161B	ENST00000286544.3	protein_coding	73949973,73946286,73944335,73942369,73940926,73937948,73937602,73935949,73932510	73950414,73946605,73944885,73942715,73941053,73938112,73937701,73936088,73934394	Gene ID= ENSG00000156050.8 TPM= 5.79 Transcript Type= protein_coding
chr14	73962693	74019332	73962693	74019332	-	ENST00000334696.10@ENTPD5	ENST00000334696.10	protein_coding	74019250,74015824,74011091,73987886,73986814,73983018,73977299,73977024,73976324,73975936,73974924,73973877,73972884,73971852,73970010,73962693	74019332,74015930,74011150,73988172,73986893,73983161,73977374,73977059,73976412,73976015,73974985,73973978,73973024,73971908,73970125,73967014	Gene ID= ENSG00000187097.12 TPM= 2.9 Transcript Type= protein_coding
chr14	74018535	74020192	74018535	74020192	+	transcript2240.chr14.nnic@NA	transcript2240.chr14.nnic	NA	74018535	74020192	Gene ID= novel_gene_chr14_2241 TPM= 1.93 Transcript Type= NA
chr14	74084956	74201233	74084956	74201233	+	transcript2245.chr14.nnic@LIN52	transcript2245.chr14.nnic	protein_coding	74084956,74091232,74095948,74097794,74101155,74198922,74200201	74084993,74091306,74095985,74097860,74101238,74200065,74201233	Gene ID= ENSG00000205659.10 TPM= 5.79 Transcript Type= NA
chr14	74084796	74201235	74084796	74201235	+	ENST00000555028.5@LIN52	ENST00000555028.5	protein_coding	74084796,74091232,74095948,74097794,74101155,74198922	74084993,74091306,74095985,74097860,74101238,74201235	Gene ID= ENSG00000205659.10 TPM= 2.9 Transcript Type= protein_coding
chr14	74285423	74303056	74285423	74303056	-	ENST00000356924.8@ABCD4	ENST00000356924.8	protein_coding	74302875,74300150,74299548,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286701,74285423	74303056,74300268,74299675,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816,74286529	Gene ID= ENSG00000119688.20 TPM= 9.65 Transcript Type= protein_coding
chr14	74286014	74302989	74286014	74302989	-	transcript2253.chr14.nic@ABCD4	transcript2253.chr14.nic	protein_coding	74302875,74300150,74299548,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286014	74302989,74300268,74299675,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816	Gene ID= ENSG00000119688.20 TPM= 3.86 Transcript Type= NA
chr14	74286014	74302989	74286014	74302989	-	transcript2257.chr14.nic@ABCD4	transcript2257.chr14.nic	protein_coding	74302875,74300150,74297930,74296333,74295854,74295148,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286014	74302989,74300268,74298069,74296449,74295979,74295198,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816	Gene ID= ENSG00000119688.20 TPM= 2.9 Transcript Type= NA
chr14	74294054	74298069	74294054	74298069	-	ENST00000489678.1@ABCD4	ENST00000489678.1	protein_coding	74296333,74295854,74294054	74298069,74295979,74295198	Gene ID= ENSG00000119688.20 TPM= 1.93 Transcript Type= retained_intron
chr14	74479933	74493512	74479933	74493512	-	ENST00000555619.5@NPC2	ENST00000555619.5	protein_coding	74493193,74486329,74484415,74480702,74479933	74493512,74486436,74484587,74480779,74480288	Gene ID= ENSG00000119655.10 TPM= 33.79 Transcript Type= protein_coding
chr14	74480082	74493339	74480082	74493339	-	ENST00000553490.5@NPC2	ENST00000553490.5	protein_coding	74493193,74486329,74484415,74480686,74480082	74493339,74486436,74484587,74480779,74480288	Gene ID= ENSG00000119655.10 TPM= 3.86 Transcript Type= protein_coding
chr14	74493756	74495366	74493756	74495366	+	ENST00000298818.12@ISCA2	ENST00000298818.12	protein_coding	74493756,74494050,74494275,74494839	74493845,74494152,74494404,74495366	Gene ID= ENSG00000165898.13 TPM= 51.16 Transcript Type= protein_coding
chr14	74661252	74713115	74661252	74713115	-	ENST00000356357.8@AREL1	ENST00000356357.8	protein_coding	74712933,74692041,74685600,74684454,74683296,74676583,74676141,74675699,74674034,74673077,74672831,74671408,74670762,74669947,74669649,74667465,74667319,74664836,74663899,74661252	74713115,74692328,74685660,74684680,74683533,74676752,74676321,74675946,74674111,74673218,74672952,74671483,74670871,74670126,74669774,74667594,74667377,74664925,74664074,74663822	Gene ID= ENSG00000119682.16 TPM= 18.34 Transcript Type= protein_coding
chr14	74713144	74738620	74713144	74738620	+	ENST00000341162.8@FCF1	ENST00000341162.8	protein_coding	74713144,74713485,74714872,74715951,74723272,74732731,74734076,74734882	74713200,74713552,74714943,74716099,74723344,74732818,74734170,74738620	Gene ID= ENSG00000119616.11 TPM= 4.83 Transcript Type= protein_coding
chr14	74763366	74836281	74763366	74836281	+	ENST00000325680.11@YLPM1	ENST00000325680.11	protein_coding	74763366,74778447,74780405,74781334,74797580,74802556,74809380,74809910,74810225,74811620,74812628,74816203,74816571,74816931,74817194,74818231,74821057,74824256,74829213,74835265,74835775	74764362,74778683,74780584,74782325,74799697,74802676,74809797,74810002,74810420,74811738,74812782,74816265,74816690,74817107,74817277,74818314,74821137,74824307,74829343,74835447,74836281	Gene ID= ENSG00000119596.17 TPM= 5.79 Transcript Type= protein_coding
chr14	74781385	74836190	74781385	74836190	+	ENST00000549293.5@YLPM1	ENST00000549293.5	protein_coding	74781385,74797580,74802556,74809380,74809910,74810225,74811620,74812628,74816203,74816571,74816931,74817194,74818231,74821057,74829213,74835265,74835775	74782325,74799697,74802676,74809797,74810002,74810420,74811738,74812782,74816265,74816690,74817107,74817277,74818314,74821137,74829343,74835447,74836190	Gene ID= ENSG00000119596.17 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr14	74881899	74903743	74881899	74903743	+	transcript2284.chr14.nnic@DLST	transcript2284.chr14.nnic	protein_coding	74881899,74882591,74885586,74889095,74889275,74889897,74891056,74892834,74893348,74894312,74898369,74899923,74900289,74901066,74902196,74903650	74882016,74882624,74885634,74889147,74889349,74889952,74891167,74892986,74893424,74894409,74898499,74899996,74900372,74901233,74902723,74903743	Gene ID= ENSG00000119689.14 TPM= 1.93 Transcript Type= NA
chr14	74881893	74903745	74881893	74903745	+	ENST00000334220.8@DLST	ENST00000334220.8	protein_coding	74881893,74882591,74885586,74889095,74889275,74889897,74891056,74892834,74893348,74894312,74898369,74899923,74900289,74901066,74902196	74882016,74882624,74885634,74889147,74889349,74889952,74891167,74892986,74893424,74894409,74898499,74899996,74900372,74901233,74903745	Gene ID= ENSG00000119689.14 TPM= 3.86 Transcript Type= protein_coding
chr14	74905643	74923230	74905643	74923230	-	transcript2288.chr14.nnic@RPS6KL1	transcript2288.chr14.nnic	protein_coding	74923180,74921978,74921277,74919845,74916473,74911794,74911248,74909543,74909101,74908850,74907435,74907018,74905643	74923230,74922485,74921561,74919969,74916520,74911841,74911380,74910148,74909190,74908932,74907530,74907124,74906759	Gene ID= ENSG00000198208.11 TPM= 3.21 Transcript Type= NA
chr14	74905643	74923282	74905643	74923282	-	transcript2289.chr14.nic@RPS6KL1	transcript2289.chr14.nic	protein_coding	74923180,74921978,74921277,74919845,74918513,74911794,74911248,74909543,74909101,74908850,74907435,74907018,74905643	74923282,74922485,74921561,74919969,74918605,74911841,74911380,74910148,74909190,74908932,74907530,74907124,74906759	Gene ID= ENSG00000198208.11 TPM= 3.21 Transcript Type= NA
chr14	74905643	74923302	74905643	74923302	-	ENST00000555647.5@RPS6KL1	ENST00000555647.5	protein_coding	74923180,74922341,74921277,74919845,74918513,74911794,74911248,74909543,74909101,74908850,74907435,74905643	74923302,74922485,74921561,74919969,74918605,74911841,74911380,74910148,74909190,74908932,74907530,74907124	Gene ID= ENSG00000198208.11 TPM= 4.18 Transcript Type= protein_coding
chr14	74918119	74923282	74918119	74923282	-	transcript2319.chr14.nic@RPS6KL1	transcript2319.chr14.nic	protein_coding	74923180,74921978,74921277,74918119	74923282,74922485,74921561,74919969	Gene ID= ENSG00000198208.11 TPM= 1.93 Transcript Type= NA
chr14	74910890	74923255	74910890	74923255	-	ENST00000553894.6@RPS6KL1	ENST00000553894.6	protein_coding	74923180,74921978,74921277,74919845,74918513,74911794,74910890	74923255,74922485,74921561,74919969,74918605,74911841,74911380	Gene ID= ENSG00000198208.11 TPM= 1.93 Transcript Type= retained_intron
chr14	74941834	74955784	74941834	74955784	-	ENST00000555567.5@PGF	ENST00000555567.5	protein_coding	74955168,74953904,74949357,74948507,74946379,74946213,74941834	74955784,74953946,74949553,74948583,74946408,74946275,74942733	Gene ID= ENSG00000119630.13 TPM= 14.48 Transcript Type= protein_coding
chr14	74941841	74955626	74941841	74955626	-	ENST00000553716.5@PGF	ENST00000553716.5	protein_coding	74955168,74953904,74949357,74948507,74946379,74941841	74955626,74953946,74949553,74948583,74946408,74942733	Gene ID= ENSG00000119630.13 TPM= 11.58 Transcript Type= protein_coding
chr14	75002911	75012366	75002911	75012366	+	ENST00000266126.9@EIF2B2	ENST00000266126.9	protein_coding	75002911,75003275,75003551,75004737,75005866,75006577,75007722,75009031	75003153,75003395,75003699,75004900,75005961,75006714,75007788,75012366	Gene ID= ENSG00000119718.10 TPM= 26.06 Transcript Type= protein_coding
chr14	75047917	75051466	75047917	75051466	-	transcript2333.chr14.nic@MLH3	transcript2333.chr14.nic	protein_coding	75051380,75047917	75051466,75049718	Gene ID= ENSG00000119684.15 TPM= 2.9 Transcript Type= NA
chr14	75047901	75069387	75047901	75069387	-	transcript2332.chr14.nnic@ACYP1	transcript2332.chr14.nnic	protein_coding	75069210,75047901	75069387,75049718	Gene ID= ENSG00000119640.8 TPM= 1.93 Transcript Type= NA
chr14	75053221	75069295	75053221	75069295	-	transcript2334.chr14.nnic@ACYP1	transcript2334.chr14.nnic	protein_coding	75069210,75053221	75069295,75053659	Gene ID= ENSG00000119640.8 TPM= 1.93 Transcript Type= NA
chr14	75053237	75069483	75053237	75069483	-	ENST00000555463.1@ACYP1	ENST00000555463.1	protein_coding	75069210,75063470,75053237	75069483,75063561,75053659	Gene ID= ENSG00000119640.8 TPM= 3.86 Transcript Type= protein_coding
chr14	75067513	75068724	75067513	75068724	+	transcript2335.chr14.nnic@NA	transcript2335.chr14.nnic	NA	75067513	75068724	Gene ID= novel_gene_chr14_2336 TPM= 1.93 Transcript Type= NA
chr14	75069641	75078089	75069641	75078089	+	ENST00000439583.2@ZC2HC1C	ENST00000439583.2	protein_coding	75069641,75070555,75077532	75069749,75071396,75078089	Gene ID= ENSG00000119703.13 TPM= 3.86 Transcript Type= protein_coding
chr14	75069280	75079987	75069280	75079987	+	ENST00000524913.2@ZC2HC1C	ENST00000524913.2	protein_coding	75069280,75070555,75077532	75069749,75071911,75079987	Gene ID= ENSG00000119703.13 TPM= 1.93 Transcript Type= protein_coding
chr14	75079353	75127080	75079353	75127080	-	ENST00000238616.9@NEK9	ENST00000238616.9	protein_coding	75126703,75124046,75121119,75120510,75118830,75117195,75114203,75113339,75110321,75109685,75107343,75106502,75105950,75103842,75101657,75100992,75097100,75095372,75091270,75088480,75087018,75079353	75127080,75124223,75121174,75120580,75118935,75117326,75114313,75113403,75110371,75109877,75107487,75106702,75105996,75103997,75101765,75101153,75097270,75095431,75091478,75088641,75087230,75084686	Gene ID= ENSG00000119638.12 TPM= 1.93 Transcript Type= protein_coding
chr14	75126341	75127061	75126341	75127061	-	transcript2361.chr14.nnic@NA	transcript2361.chr14.nnic	NA	75126341	75127061	Gene ID= novel_gene_chr14_2362 TPM= 13.51 Transcript Type= NA
chr14	75131470	75176631	75131470	75176631	-	ENST00000303575.8@TMED10	ENST00000303575.8	protein_coding	75176355,75152032,75147664,75135760,75131470	75176631,75152143,75147737,75135886,75135006	Gene ID= ENSG00000170348.8 TPM= 112.94 Transcript Type= protein_coding
chr14	75237813	75238319	75237813	75238319	+	transcript2369.chr14.nnic@NA	transcript2369.chr14.nnic	NA	75237813,75238117	75237997,75238319	Gene ID= novel_gene_chr14_2370 TPM= 1.93 Transcript Type= NA
chr14	75277028	75278044	75277028	75278044	+	transcript2371.chr14.nnic@NA	transcript2371.chr14.nnic	NA	75277028	75278044	Gene ID= novel_gene_chr14_2372 TPM= 4.83 Transcript Type= NA
chr14	75278774	75282230	75278774	75282230	+	ENST00000303562.8@FOS	ENST00000303562.8	protein_coding	75278774,75279877,75280560,75280783	75279123,75280128,75280667,75282230	Gene ID= ENSG00000170345.9 TPM= 48.27 Transcript Type= protein_coding
chr14	75423683	75427741	75423683	75427741	-	ENST00000560419.1@AF111167.2	ENST00000560419.1	antisense_RNA	75423683	75427741	Gene ID= ENSG00000259319.1 TPM= 1.93 Transcript Type= antisense_RNA
chr14	75427998	75470457	75427998	75470457	+	transcript2376.chr14.nnic@JDP2	transcript2376.chr14.nnic	protein_coding	75427998,75431681,75432118,75437898,75461426,75469290	75428252,75431901,75432336,75438121,75461530,75470457	Gene ID= ENSG00000140044.12 TPM= 14 Transcript Type= NA
chr14	75428019	75470457	75428019	75470457	+	transcript2378.chr14.nnic@JDP2	transcript2378.chr14.nnic	protein_coding	75428019,75432118,75437898,75461426,75469290	75428252,75432336,75438121,75461530,75470457	Gene ID= ENSG00000140044.12 TPM= 14.96 Transcript Type= NA
chr14	75578596	75648167	75578596	75648167	+	transcript2391.chr14.nnic@FLVCR2	transcript2391.chr14.nnic	protein_coding	75578596,75622079,75624612,75633629,75634910,75640955,75641182,75641843,75646401	75579641,75622220,75624752,75633696,75635013,75641060,75641293,75641898,75648167	Gene ID= ENSG00000119686.9 TPM= 1.93 Transcript Type= NA
chr14	75578617	75648167	75578617	75648167	+	ENST00000238667.8@FLVCR2	ENST00000238667.8	protein_coding	75578617,75622079,75624612,75633629,75634910,75639352,75640955,75641182,75641843,75646401	75579641,75622220,75624752,75633696,75635013,75639462,75641060,75641293,75641898,75648167	Gene ID= ENSG00000119686.9 TPM= 4.83 Transcript Type= protein_coding
chr14	75661278	75955078	75661278	75955078	+	ENST00000298832.13@TTLL5	ENST00000298832.13	protein_coding	75661278,75663055,75669416,75681545,75683550,75690192,75699188,75707018,75707623,75717861,75719735,75720596,75732338,75733989,75735195,75745095,75745490,75752893,75764615,75766062,75771734,75775484,75776747,75779575,75782487,75783147,75792916,75820007,75863667,75882685,75902142,75954424	75661387,75663223,75669522,75681627,75683656,75690322,75699270,75707087,75707707,75717962,75719826,75720703,75732419,75734050,75735289,75745208,75745581,75752955,75764772,75766368,75771854,75775630,75776850,75779702,75782573,75783530,75793100,75820161,75863862,75882902,75902224,75955078	Gene ID= ENSG00000119685.19 TPM= 2.9 Transcript Type= protein_coding
chr14	75649791	75661189	75649791	75661189	-	ENST00000256319.6@ERG28	ENST00000256319.6	protein_coding	75660775,75657370,75654886,75651771,75649791	75661189,75657533,75654976,75651889,75651634	Gene ID= ENSG00000133935.6 TPM= 16.41 Transcript Type= protein_coding
chr14	75958097	75981924	75958097	75981924	-	transcript2405.chr14.nnic@TGFB3	transcript2405.chr14.nnic	protein_coding	75980542,75971555,75971126,75965588,75963316,75958097	75981924,75971718,75971255,75965695,75963487,75959345	Gene ID= ENSG00000119699.7 TPM= 6.76 Transcript Type= NA
chr14	75985753	76083749	75985753	76083749	+	ENST00000314067.10@IFT43	ENST00000314067.10	protein_coding	75985753,75988885,76022327,76058642,76059327,76082295,76082617,76083227,76083458	75985840,75988977,76022394,76058674,76059373,76082367,76082692,76083289,76083749	Gene ID= ENSG00000119650.12 TPM= 14.48 Transcript Type= protein_coding
chr14	75985784	76059271	75985784	76059271	+	ENST00000556742.1@IFT43	ENST00000556742.1	protein_coding	75985784,75988885,76022327,76058642	75985840,75988977,76022394,76059271	Gene ID= ENSG00000119650.12 TPM= 1.93 Transcript Type= protein_coding
chr14	76151919	76175518	76151919	76175518	+	transcript2424.chr14.nic@GPATCH2L	transcript2424.chr14.nic	protein_coding	76151919,76154354,76166663,76171843,76173546	76151991,76155025,76166727,76172019,76175518	Gene ID= ENSG00000089916.17 TPM= 1.93 Transcript Type= NA
chr14	76196439	76197950	76196439	76197950	-	transcript2429.chr14.nnic@NA	transcript2429.chr14.nnic	NA	76196439	76197950	Gene ID= novel_gene_chr14_2430 TPM= 11.58 Transcript Type= NA
chr14	76201906	76204894	76201906	76204894	+	transcript2427.chr14.nnic@NA	transcript2427.chr14.nnic	NA	76201906	76204894	Gene ID= novel_gene_chr14_2428 TPM= 1.93 Transcript Type= NA
chr14	76205033	76207538	76205033	76207538	+	transcript2425.chr14.nnic@NA	transcript2425.chr14.nnic	NA	76205033	76207538	Gene ID= novel_gene_chr14_2426 TPM= 1.93 Transcript Type= NA
chr14	76499159	76501837	76499159	76501837	+	transcript2431.chr14.nnic@NA	transcript2431.chr14.nnic	NA	76499159	76501837	Gene ID= novel_gene_chr14_2432 TPM= 2.9 Transcript Type= NA
chr14	76761527	76764019	76761527	76764019	+	transcript2437.chr14.nnic@NA	transcript2437.chr14.nnic	NA	76761527	76764019	Gene ID= novel_gene_chr14_2438 TPM= 2.9 Transcript Type= NA
chr14	76786178	76812940	76786178	76812940	-	ENST00000251089.6@ANGEL1	ENST00000251089.6	protein_coding	76812764,76809059,76807922,76807433,76806416,76803786,76803371,76791297,76790611,76786178	76812940,76809643,76808148,76807502,76806849,76803912,76803481,76791366,76790774,76789388	Gene ID= ENSG00000013523.9 TPM= 7.72 Transcript Type= protein_coding
chr14	77024543	77028699	77024543	77028699	-	ENST00000238647.4@IRF2BPL	ENST00000238647.4	protein_coding	77024543	77028699	Gene ID= ENSG00000119669.4 TPM= 13.51 Transcript Type= protein_coding
chr14	77098097	77117287	77098097	77117287	+	ENST00000361786.6@CIPC	ENST00000361786.6	protein_coding	77098097,77105657,77109812,77113425	77098361,77105844,77109981,77117287	Gene ID= ENSG00000198894.7 TPM= 172.79 Transcript Type= protein_coding
chr14	77274956	77320884	77274956	77320884	-	ENST00000261534.8@POMT2	ENST00000261534.8	protein_coding	77320434,77311949,77306337,77304692,77302835,77301090,77299455,77298689,77296164,77291314,77288762,77286744,77285481,77284950,77283797,77280392,77280021,77279823,77278729,77278394,77274956	77320884,77312033,77306441,77304800,77302943,77301249,77299561,77298771,77296273,77291380,77288831,77286822,77285632,77285041,77283873,77280463,77280080,77279928,77278869,77278508,77277481	Gene ID= ENSG00000009830.11 TPM= 10.62 Transcript Type= protein_coding
chr14	77320884	77331597	77320884	77331597	+	ENST00000216465.9@GSTZ1	ENST00000216465.9	protein_coding	77320884,77324870,77326838,77327472,77327912,77329123,77329755,77330310,77331069	77321183,77324921,77326905,77327552,77328037,77329201,77329807,77330359,77331597	Gene ID= ENSG00000100577.18 TPM= 13.51 Transcript Type= protein_coding
chr14	77426675	77457605	77426675	77457605	-	ENST00000553888.5@VIPAS39	ENST00000553888.5	protein_coding	77457095,77454010,77453299,77451187,77449714,77449293,77448494,77444249,77443119,77442560,77441066,77437808,77435844,77435259,77434262,77433842,77429681,77429006,77428370,77426675	77457605,77454102,77453401,77451333,77449752,77449357,77448550,77444341,77443152,77442662,77441093,77437881,77435919,77435393,77434303,77433931,77429767,77429095,77428474,77427636	Gene ID= ENSG00000151445.15 TPM= 1.28 Transcript Type= protein_coding
chr14	77426682	77457640	77426682	77457640	-	ENST00000557658.5@VIPAS39	ENST00000557658.5	protein_coding	77457495,77454010,77453299,77451187,77449714,77449293,77448494,77444249,77443119,77442560,77441066,77437808,77435844,77435259,77434262,77433842,77429681,77429006,77428370,77426682	77457640,77454102,77453401,77451333,77449752,77449357,77448550,77444341,77443152,77442662,77441093,77437881,77435919,77435393,77434303,77433931,77429767,77429095,77428474,77427636	Gene ID= ENSG00000151445.15 TPM= 3.21 Transcript Type= protein_coding
chr14	77426675	77457561	77426675	77457561	-	ENST00000343765.6@VIPAS39	ENST00000343765.6	protein_coding	77457495,77457095,77454010,77453299,77451187,77449714,77449293,77448494,77444249,77443119,77442560,77441066,77437808,77435844,77435259,77434262,77433842,77429681,77429006,77428370,77426675	77457561,77457365,77454102,77453401,77451333,77449752,77449357,77448550,77444341,77443152,77442662,77441093,77437881,77435919,77435393,77434303,77433931,77429767,77429095,77428474,77427636	Gene ID= ENSG00000151445.15 TPM= 2.25 Transcript Type= protein_coding
chr14	77458030	77469474	77458030	77469474	+	ENST00000216479.7@AHSA1	ENST00000216479.7	protein_coding	77458030,77459616,77462160,77462642,77464598,77465539,77468083,77468457,77469077	77458269,77459806,77462242,77462759,77464686,77465667,77468184,77468508,77469474	Gene ID= ENSG00000100591.7 TPM= 126.46 Transcript Type= protein_coding
chr14	77512004	77616668	77512004	77616668	-	transcript2479.chr14.nnic@SPTLC2	transcript2479.chr14.nnic	protein_coding	77616448,77597186,77578955,77576767,77570384,77562396,77560981,77557041,77555300,77552096,77521446,77518038,77512004	77616668,77597380,77579109,77576915,77570508,77562489,77561013,77557146,77555519,77552222,77521581,77518167,77512403	Gene ID= ENSG00000100596.6 TPM= 1.93 Transcript Type= NA
chr14	77672404	77708020	77672404	77708020	-	ENST00000216489.7@ALKBH1	ENST00000216489.7	protein_coding	77707822,77704369,77694738,77679880,77675656,77672404	77708020,77704477,77694900,77679970,77675849,77674241	Gene ID= ENSG00000100601.9 TPM= 1.93 Transcript Type= protein_coding
chr14	77673075	77708022	77673075	77708022	-	transcript2489.chr14.nic@ALKBH1	transcript2489.chr14.nic	protein_coding	77707822,77704369,77694738,77679880,77675656,77673075	77708022,77704477,77694900,77679970,77675794,77674241	Gene ID= ENSG00000100601.9 TPM= 2.9 Transcript Type= NA
chr14	77673075	77708010	77673075	77708010	-	ENST00000557057.5@ALKBH1	ENST00000557057.5	protein_coding	77707822,77704369,77679880,77675656,77673075	77708010,77704477,77679970,77675849,77674241	Gene ID= ENSG00000100601.9 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr14	77708079	77717598	77708079	77717598	+	ENST00000238688.9@SLIRP	ENST00000238688.9	protein_coding	77708079,77710838,77715772,77717502	77708208,77710896,77715879,77717598	Gene ID= ENSG00000119705.9 TPM= 3.86 Transcript Type= protein_coding
chr14	77717599	77761190	77717599	77761190	-	ENST00000261531.11@SNW1	ENST00000261531.11	protein_coding	77761114,77754967,77751319,77738966,77738778,77736971,77735937,77734947,77732485,77730988,77723181,77720711,77718367,77717599	77761190,77755120,77751480,77739061,77738884,77737075,77736006,77735012,77732601,77731129,77723277,77720828,77718530,77718286	Gene ID= ENSG00000100603.13 TPM= 51.16 Transcript Type= protein_coding
chr14	77800083	77933954	77800083	77933954	+	ENST00000238561.9@ADCK1	ENST00000238561.9	protein_coding	77800083,77818968,77822435,77859076,77887091,77899100,77907803,77924457,77925764,77931518,77933220	77800170,77819113,77822518,77859279,77887249,77899258,77907919,77924606,77925961,77931711,77933954	Gene ID= ENSG00000063761.15 TPM= 2.9 Transcript Type= protein_coding
chr14	80201765	80458551	80201765	80458551	-	transcript2509.chr14.nnic@DIO2	transcript2509.chr14.nnic	protein_coding	80458477,80387678,80215972,80211251,80201765	80458551,80387808,80216150,80211525,80203288	Gene ID= ENSG00000211448.11 TPM= 2.41 Transcript Type= NA
chr14	80201765	80388035	80201765	80388035	-	transcript2511.chr14.nnic@DIO2	transcript2511.chr14.nnic	protein_coding	80387678,80215972,80211251,80201765	80388035,80216150,80211525,80203288	Gene ID= ENSG00000211448.11 TPM= 2.41 Transcript Type= NA
chr14	80384027	80458632	80384027	80458632	-	transcript2514.chr14.nnic@DIO2	transcript2514.chr14.nnic	protein_coding	80458477,80384027	80458632,80387808	Gene ID= ENSG00000211448.11 TPM= 1.93 Transcript Type= NA
chr14	80455233	80472978	80455233	80472978	+	transcript2512.chr14.nnic@DIO2-AS1	transcript2512.chr14.nnic	antisense_RNA	80455233,80464770,80471860	80455389,80464956,80472978	Gene ID= ENSG00000258766.1 TPM= 5.79 Transcript Type= NA
chr14	81176141	81179256	81176141	81179256	-	transcript2516.chr14.nnic@NA	transcript2516.chr14.nnic	NA	81176141	81179256	Gene ID= novel_gene_chr14_2517 TPM= 3.86 Transcript Type= NA
chr14	81196582	81205830	81196582	81205830	-	transcript2520.chr14.nnic@GTF2A1	transcript2520.chr14.nnic	protein_coding	81205437,81203900,81201594,81196582	81205830,81204783,81201658,81197484	Gene ID= ENSG00000165417.11 TPM= 1.93 Transcript Type= NA
chr14	81472923	81533880	81472923	81533880	-	transcript2531.chr14.nic@SEL1L	transcript2531.chr14.nic	protein_coding	81533675,81527701,81526733,81506074,81504201,81502721,81499609,81499459,81498413,81497892,81495081,81492480,81490388,81489252,81487855,81487390,81486289,81485672,81484225,81479612,81472923	81533880,81527738,81526964,81506178,81504306,81502883,81499662,81499518,81498494,81498046,81495137,81492548,81490465,81489314,81487942,81487538,81486454,81485746,81484397,81479740,81477181	Gene ID= ENSG00000071537.13 TPM= 14.48 Transcript Type= NA
chr14	85531194	85532438	85531194	85532438	+	transcript2541.chr14.nnic@NA	transcript2541.chr14.nnic	NA	85531194	85532438	Gene ID= novel_gene_chr14_2542 TPM= 1.93 Transcript Type= NA
chr14	85624442	85627921	85624442	85627921	+	transcript2543.chr14.nnic@NA	transcript2543.chr14.nnic	NA	85624442	85627921	Gene ID= novel_gene_chr14_2544 TPM= 2.9 Transcript Type= NA
chr14	87933014	87993271	87933014	87993271	-	ENST00000261304.6@GALC	ENST00000261304.6	protein_coding	87992970,87988455,87988144,87986489,87984394,87982205,87976358,87968335,87965505,87963384,87950659,87949845,87947728,87945553,87941395,87939905,87933014	87993271,87988523,87988207,87986602,87984533,87982243,87976488,87968490,87965629,87963511,87950748,87949931,87947878,87945733,87941558,87939981,87934878	Gene ID= ENSG00000054983.16 TPM= 10.62 Transcript Type= protein_coding
chr14	88385530	88438456	88385530	88438456	+	ENST00000393545.8@SPATA7	ENST00000393545.8	protein_coding	88385530,88391381,88393393,88396156,88416711,88426232,88427630,88429348,88431172,88433135,88437543,88437838	88385837,88391455,88393488,88396203,88416844,88426704,88427696,88429463,88431225,88433212,88437597,88438456	Gene ID= ENSG00000042317.16 TPM= 3.86 Transcript Type= protein_coding
chr14	88384924	88438460	88384924	88438460	+	ENST00000556553.5@SPATA7	ENST00000556553.5	protein_coding	88384924,88385398,88391381,88396156,88416711,88426232,88427630,88429348,88431172,88433135,88437543,88437838	88385061,88385837,88391455,88396203,88416844,88426704,88427696,88429463,88431225,88433212,88437597,88438460	Gene ID= ENSG00000042317.16 TPM= 4.83 Transcript Type= protein_coding
chr14	88385661	88438456	88385661	88438456	+	transcript2557.chr14.nnic@SPATA7	transcript2557.chr14.nnic	protein_coding	88385661,88391381,88396156,88416711,88426232,88427630,88429348,88433135,88437543,88437838	88385837,88391455,88396203,88416844,88426704,88427696,88429463,88433212,88437597,88438456	Gene ID= ENSG00000042317.16 TPM= 1.93 Transcript Type= NA
chr14	88465778	88550622	88465778	88550622	-	ENST00000328736.7@PTPN21	ENST00000328736.7	protein_coding	88550238,88517092,88507923,88505304,88504425,88501281,88500783,88497203,88496413,88485782,88485076,88478920,88473665,88472244,88469922,88469499,88468916,88465778	88550622,88517261,88508020,88505371,88504495,88501368,88500871,88497290,88496492,88485842,88485160,88480352,88473802,88472465,88470050,88469733,88469076,88468265	Gene ID= ENSG00000070778.12 TPM= 5.63 Transcript Type= protein_coding
chr14	88562970	88612407	88562970	88612407	+	ENST00000302216.12@ZC3H14	ENST00000302216.12	protein_coding	88562970,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88607243,88609267,88609715,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88607363,88609403,88609803,88610940,88612407	Gene ID= ENSG00000100722.18 TPM= 6.27 Transcript Type= protein_coding
chr14	88562978	88612979	88562978	88612979	+	transcript2577.chr14.nic@ZC3H14	transcript2577.chr14.nic	protein_coding	88562978,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88607243,88609267,88609712,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88607363,88609403,88609803,88610940,88612979	Gene ID= ENSG00000100722.18 TPM= 8.21 Transcript Type= NA
chr14	88562978	88586851	88562978	88586851	+	transcript2583.chr14.nic@ZC3H14	transcript2583.chr14.nic	protein_coding	88562978,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88586571	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88586851	Gene ID= ENSG00000100722.18 TPM= 1.93 Transcript Type= NA
chr14	88824624	88881078	88824624	88881078	+	ENST00000622513.4@TTC8	ENST00000622513.4	protein_coding	88824624,88839452,88840865,88841037,88841425,88843806,88852971,88857190,88861222,88870059,88871549,88872330,88875026,88877294	88824821,88839572,88840928,88841196,88841514,88843850,88853056,88857277,88861332,88870198,88871723,88872452,88875109,88881078	Gene ID= ENSG00000165533.18 TPM= 2.9 Transcript Type= protein_coding
chr14	89161134	89417223	89161134	89417223	-	transcript2590.chr14.nic@FOXN3	transcript2590.chr14.nic	protein_coding	89416871,89411934,89350672,89280950,89190384,89180701,89161134	89417223,89412490,89350808,89281014,89190449,89180806,89162969	Gene ID= ENSG00000053254.15 TPM= 6.52 Transcript Type= NA
chr14	89161385	89417112	89161385	89417112	-	ENST00000557258.5@FOXN3	ENST00000557258.5	protein_coding	89416871,89411934,89350672,89280950,89180701,89161385	89417112,89412490,89350808,89281014,89180806,89162969	Gene ID= ENSG00000053254.15 TPM= 8.69 Transcript Type= protein_coding
chr14	90256495	90275429	90256495	90275429	+	ENST00000261303.12@PSMC1	ENST00000261303.12	protein_coding	90256495,90259160,90260115,90263318,90263662,90264041,90265070,90268224,90269397,90270198,90272273	90256600,90259213,90260211,90263442,90263847,90264169,90265166,90268413,90269548,90270352,90275429	Gene ID= ENSG00000100764.13 TPM= 196.12 Transcript Type= protein_coding
chr14	90256518	90272624	90256518	90272624	+	transcript2612.chr14.nnic@PSMC1	transcript2612.chr14.nnic	protein_coding	90256518,90259160,90260115,90263318,90264041,90265070,90268224,90269397,90270198,90272273	90256600,90259213,90260211,90263442,90264169,90265166,90268413,90269548,90270352,90272624	Gene ID= ENSG00000100764.13 TPM= 22.37 Transcript Type= NA
chr14	90278054	90332115	90278054	90332115	-	transcript2621.chr14.nic@NRDE2	transcript2621.chr14.nic	protein_coding	90331841,90318005,90316578,90312394,90303935,90302720,90301774,90301239,90298260,90292697,90290221,90288217,90286354,90279062,90278054	90332115,90318113,90316811,90312543,90304382,90303125,90301803,90301372,90298380,90292872,90290607,90289145,90286492,90279133,90278461	Gene ID= ENSG00000119720.17 TPM= 2.9 Transcript Type= NA
chr14	90267856	90332137	90267856	90332137	-	ENST00000354366.7@NRDE2	ENST00000354366.7	protein_coding	90331841,90318005,90316578,90312394,90303935,90302720,90301239,90298260,90292697,90290221,90288217,90286354,90279062,90267856	90332137,90318113,90316811,90312543,90304382,90303125,90301372,90298380,90292872,90290607,90289145,90286492,90279133,90278461	Gene ID= ENSG00000119720.17 TPM= 6.76 Transcript Type= protein_coding
chr14	90382850	90384792	90382850	90384792	+	transcript2625.chr14.nnic@NA	transcript2625.chr14.nnic	NA	90382850	90384792	Gene ID= novel_gene_chr14_2626 TPM= 1.93 Transcript Type= NA
chr14	90397029	90405072	90397029	90405072	+	ENST00000447653.7@CALM1	ENST00000447653.7	protein_coding	90397029,90398991,90400065,90401259,90403862,90404379,90404689	90397233,90399087,90400095,90401402,90403968,90404514,90405072	Gene ID= ENSG00000198668.10 TPM= 3.86 Transcript Type= protein_coding
chr14	90396983	90408261	90396983	90408261	+	ENST00000356978.8@CALM1	ENST00000356978.8	protein_coding	90396983,90400065,90401259,90403862,90404379,90404689	90397233,90400095,90401402,90403968,90404514,90408261	Gene ID= ENSG00000198668.10 TPM= 177.62 Transcript Type= protein_coding
chr14	90540588	90816509	90540588	90816509	-	transcript2665.chr14.nic@TTC7B	transcript2665.chr14.nic	protein_coding	90816175,90786174,90780738,90744792,90730075,90695500,90689540,90680472,90676523,90658304,90657174,90654993,90652841,90646951,90644048,90617929,90610742,90605597,90603253,90593486,90578106,90540588	90816509,90786328,90780906,90744922,90730196,90695578,90689712,90680535,90676660,90658387,90657278,90655110,90652898,90647023,90644208,90618045,90610839,90605758,90603303,90593626,90578308,90541589	Gene ID= ENSG00000165914.14 TPM= 11.9 Transcript Type= NA
chr14	90540588	90816509	90540588	90816509	-	transcript2666.chr14.nnic@TTC7B	transcript2666.chr14.nnic	protein_coding	90816175,90786174,90780738,90744792,90730075,90695500,90689540,90680472,90676523,90658304,90657174,90654993,90652841,90646951,90644048,90617929,90610742,90605597,90593486,90578106,90540588	90816509,90786328,90780906,90744922,90730196,90695578,90689712,90680535,90676660,90658387,90657278,90655110,90652898,90647023,90644208,90618045,90610839,90605758,90593626,90578308,90541589	Gene ID= ENSG00000165914.14 TPM= 8.04 Transcript Type= NA
chr14	90605256	90816509	90605256	90816509	-	transcript2668.chr14.nic@TTC7B	transcript2668.chr14.nic	protein_coding	90816175,90786174,90780738,90744792,90730075,90695500,90689540,90680472,90676523,90658304,90657174,90654993,90652841,90646951,90644048,90617929,90610742,90605256	90816509,90786328,90780906,90744922,90730196,90695578,90689712,90680535,90676660,90658387,90657278,90655110,90652898,90647023,90644208,90618045,90610839,90605758	Gene ID= ENSG00000165914.14 TPM= 3.21 Transcript Type= NA
chr14	90636684	90640151	90636684	90640151	-	transcript2672.chr14.nnic@NA	transcript2672.chr14.nnic	NA	90636684	90640151	Gene ID= novel_gene_chr14_2673 TPM= 1.93 Transcript Type= NA
chr14	90871504	91060685	90871504	91060685	-	transcript2678.chr14.nnic@RPS6KA5	transcript2678.chr14.nnic	protein_coding	91060332,91001088,90978306,90947435,90943078,90927398,90923113,90920206,90906149,90902808,90900611,90900108,90899329,90894413,90890487,90875201,90873632,90871504	91060685,91001159,90978524,90947550,90943185,90927465,90923196,90920309,90906299,90902969,90900736,90900241,90899422,90894583,90890678,90875360,90873795,90872322	Gene ID= ENSG00000100784.10 TPM= 2.9 Transcript Type= NA
chr14	91114062	91225355	91114062	91225355	+	transcript2685.chr14.nic@C14orf159	transcript2685.chr14.nic	protein_coding	91114062,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91145313,91147858,91157690,91160397,91167378,91170201,91173403,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 9.47 Transcript Type= NA
chr14	91114062	91225355	91114062	91225355	+	transcript2686.chr14.nic@C14orf159	transcript2686.chr14.nic	protein_coding	91114062,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91145313,91147858,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 9.48 Transcript Type= NA
chr14	91114055	91225331	91114055	91225331	+	transcript2696.chr14.nic@C14orf159	transcript2696.chr14.nic	protein_coding	91114055,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91223679,91224684	91114283,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91223795,91225331	Gene ID= ENSG00000133943.20 TPM= 4.34 Transcript Type= NA
chr14	91114062	91225355	91114062	91225355	+	transcript2701.chr14.nic@C14orf159	transcript2701.chr14.nic	protein_coding	91114062,91145221,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91145313,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 10.44 Transcript Type= NA
chr14	91114055	91225355	91114055	91225355	+	transcript2704.chr14.nic@C14orf159	transcript2704.chr14.nic	protein_coding	91114055,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91157690,91160397,91167378,91170201,91173403,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 12.37 Transcript Type= NA
chr14	91114073	91225355	91114073	91225355	+	transcript2713.chr14.nic@C14orf159	transcript2713.chr14.nic	protein_coding	91114073,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114528,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 9.48 Transcript Type= NA
chr14	91114055	91216660	91114055	91216660	+	transcript2714.chr14.nic@C14orf159	transcript2714.chr14.nic	protein_coding	91114055,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405	91114283,91157690,91160397,91167378,91170201,91173403,91176056,91181389,91189170,91196474,91199905,91204825,91216660	Gene ID= ENSG00000133943.20 TPM= 3.86 Transcript Type= NA
chr14	91114087	91167721	91114087	91167721	+	ENST00000518665.6@C14orf159	ENST00000518665.6	protein_coding	91114087,91145221,91147781,91157639,91160266,91167225,91167469	91114283,91145313,91147858,91157690,91160397,91167378,91167721	Gene ID= ENSG00000133943.20 TPM= 1.93 Transcript Type= protein_coding
chr14	91114085	91225355	91114085	91225355	+	ENST00000521077.6@C14orf159	ENST00000521077.6	protein_coding	91114085,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91215405,91224684	91114283,91145313,91147858,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 1.93 Transcript Type= protein_coding
chr14	91114390	91225355	91114390	91225355	+	ENST00000523816.5@C14orf159	ENST00000523816.5	protein_coding	91114390,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114528,91145313,91147858,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 3.49 Transcript Type= protein_coding
chr14	91114442	91225352	91114442	91225352	+	ENST00000428926.6@C14orf159	ENST00000428926.6	protein_coding	91114442,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114528,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225352	Gene ID= ENSG00000133943.20 TPM= 2.61 Transcript Type= protein_coding
chr14	91457611	91510461	91457611	91510461	-	transcript2734.chr14.nic@PPP4R3A	transcript2734.chr14.nic	protein_coding	91509506,91490747,91485632,91481576,91476909,91476408,91475850,91473239,91473033,91470837,91466261,91465250,91462735,91462049,91461381,91457611	91510461,91490802,91485730,91482193,91476986,91476524,91475966,91473370,91473135,91470995,91466416,91465419,91462877,91462239,91461607,91458869	Gene ID= ENSG00000100796.17 TPM= 4.83 Transcript Type= NA
chr14	91458139	91510851	91458139	91510851	-	transcript2739.chr14.nic@PPP4R3A	transcript2739.chr14.nic	protein_coding	91510529,91509506,91490747,91485632,91481576,91476909,91476408,91475850,91473239,91473033,91470837,91465250,91462735,91462049,91461381,91458139	91510851,91509704,91490802,91485730,91482193,91476986,91476524,91475966,91473370,91473135,91470995,91465419,91462877,91462239,91461607,91458869	Gene ID= ENSG00000100796.17 TPM= 3.86 Transcript Type= NA
chr14	91462054	91510447	91462054	91510447	-	transcript2756.chr14.nic@PPP4R3A	transcript2756.chr14.nic	protein_coding	91509506,91490747,91485632,91481576,91476909,91476408,91475811,91473239,91473033,91470837,91465250,91462735,91462054	91510447,91490802,91485730,91482193,91476986,91476524,91475966,91473370,91473135,91470995,91465419,91462877,91462239	Gene ID= ENSG00000100796.17 TPM= 2.25 Transcript Type= NA
chr14	91462054	91510480	91462054	91510480	-	ENST00000554390.5@PPP4R3A	ENST00000554390.5	protein_coding	91509506,91490747,91485632,91481576,91476909,91476408,91475850,91473239,91473033,91470837,91465250,91462735,91462054	91510480,91490802,91485730,91482193,91476986,91476524,91475966,91473370,91473135,91470995,91465419,91462877,91462239	Gene ID= ENSG00000100796.17 TPM= 5.15 Transcript Type= non_stop_decay
chr14	92003545	92040069	92003545	92040069	-	transcript2768.chr14.nic@TRIP11	transcript2768.chr14.nic	protein_coding	92039547,92033192,92025310,92021556,92017682,92015696,92014215,92011755,92010986,92007640,92003545	92040069,92033253,92025420,92021831,92017750,92015861,92014577,92011795,92011072,92007852,92006448	Gene ID= ENSG00000100815.12 TPM= 1.93 Transcript Type= NA
chr14	91965991	92040059	91965991	92040059	-	ENST00000267622.8@TRIP11	ENST00000267622.8	protein_coding	92039547,92033192,92025310,92021556,92017682,92015696,92014215,92011755,92010986,92007640,92003419,91999968,91999240,91995352,91993809,91988284,91976108,91975172,91974627,91972717,91965991	92040059,92033253,92025420,92021831,92017750,92015861,92014577,92011795,92011072,92007852,92006448,92000108,91999433,91995515,91993912,91988383,91976189,91975286,91974743,91972861,91969893	Gene ID= ENSG00000100815.12 TPM= 1.93 Transcript Type= protein_coding
chr14	92116122	92121724	92116122	92121724	-	ENST00000553514.5@NDUFB1	ENST00000553514.5	protein_coding	92121642,92118849,92117498,92116122	92121724,92118966,92117642,92116229	Gene ID= ENSG00000183648.9 TPM= 11.58 Transcript Type= protein_coding
chr14	92122840	92125647	92122840	92125647	-	transcript2790.chr14.nnic@NA	transcript2790.chr14.nnic	NA	92122840	92125647	Gene ID= novel_gene_chr14_2791 TPM= 1.93 Transcript Type= NA
chr14	92513774	92688994	92513774	92688994	+	ENST00000216487.11@RIN3	ENST00000216487.11	protein_coding	92513774,92555751,92577360,92615407,92641238,92651582,92659161,92676475,92684987,92687926	92513976,92555955,92577477,92615479,92641329,92653075,92659469,92676606,92685150,92688994	Gene ID= ENSG00000100599.15 TPM= 5.79 Transcript Type= protein_coding
chr14	92703809	92748702	92703809	92748702	-	ENST00000334869.8@LGMN	ENST00000334869.8	protein_coding	92748489,92732649,92718747,92717380,92716136,92714376,92713823,92712805,92711837,92711659,92709672,92706483,92704640,92703809	92748702,92732815,92718844,92717461,92716221,92714451,92713885,92712871,92711955,92711748,92709872,92706653,92704707,92704361	Gene ID= ENSG00000100600.14 TPM= 42.47 Transcript Type= protein_coding
chr14	92794305	92839963	92794305	92839963	+	transcript2802.chr14.nnic@GOLGA5	transcript2802.chr14.nnic	protein_coding	92794305,92797408,92806736,92809300,92810254,92811551,92816251,92819708,92824546,92833122,92835559,92837386,92839366	92794993,92797981,92806963,92809519,92810377,92811754,92816421,92819836,92824644,92833347,92835664,92837449,92839963	Gene ID= ENSG00000066455.12 TPM= 1.93 Transcript Type= NA
chr14	92794231	92839963	92794231	92839963	+	ENST00000163416.6@GOLGA5	ENST00000163416.6	protein_coding	92794231,92797408,92806736,92809300,92810254,92811551,92816251,92819708,92824546,92833122,92835559,92837386,92839366	92794456,92797981,92806963,92809519,92810377,92811754,92816421,92819836,92824644,92833347,92835664,92837449,92839963	Gene ID= ENSG00000066455.12 TPM= 22.2 Transcript Type= protein_coding
chr14	92799445	92804518	92799445	92804518	-	transcript2808.chr14.nnic@NA	transcript2808.chr14.nnic	NA	92799445	92804518	Gene ID= novel_gene_chr14_2809 TPM= 3.86 Transcript Type= NA
chr14	92939753	93115918	92939753	93115918	-	transcript2820.chr14.nic@ITPK1	transcript2820.chr14.nic	protein_coding	93115069,93076595,93016676,92993880,92962751,92962355,92958201,92951946,92946331,92939753	93115918,93076619,93016801,92993997,92962849,92962395,92958366,92952013,92946493,92941904	Gene ID= ENSG00000100605.16 TPM= 8.93 Transcript Type= NA
chr14	93182196	93184928	93182196	93184928	-	ENST00000298894.4@MOAP1	ENST00000298894.4	protein_coding	93184810,93184559,93182196	93184928,93184713,93184362	Gene ID= ENSG00000165943.4 TPM= 72.4 Transcript Type= protein_coding
chr14	93182199	93184923	93182199	93184923	-	ENST00000556883.1@MOAP1	ENST00000556883.1	protein_coding	93184559,93182199	93184923,93184362	Gene ID= ENSG00000165943.4 TPM= 16.41 Transcript Type= protein_coding
chr14	93184951	93187086	93184951	93187086	+	ENST00000283534.4@TMEM251	ENST00000283534.4	protein_coding	93184951,93186260	93185032,93187086	Gene ID= ENSG00000153485.5 TPM= 15.44 Transcript Type= protein_coding
chr14	93185013	93187089	93185013	93187089	+	ENST00000415050.2@TMEM251	ENST00000415050.2	protein_coding	93185013,93186260	93185485,93187089	Gene ID= ENSG00000153485.5 TPM= 11.58 Transcript Type= protein_coding
chr14	93202894	93207094	93202894	93207094	-	ENST00000306954.4@GON7	ENST00000306954.4	protein_coding	93206830,93202894	93207094,93203782	Gene ID= ENSG00000170270.4 TPM= 9.65 Transcript Type= protein_coding
chr14	93207056	93229215	93207056	93229215	+	ENST00000013070.10@UBR7	ENST00000013070.10	protein_coding	93207056,93209824,93210648,93212032,93214929,93215176,93218527,93219212,93220249,93222313,93226943	93207441,93209957,93210708,93212127,93214982,93215281,93218735,93219361,93220411,93222374,93229215	Gene ID= ENSG00000012963.14 TPM= 25.1 Transcript Type= protein_coding
chr14	93934153	93976791	93934153	93976791	-	ENST00000555019.5@ASB2	ENST00000555019.5	protein_coding	93976434,93964334,93956766,93954317,93953352,93950999,93947349,93939108,93937698,93934153	93976791,93964612,93956870,93954483,93953507,93951244,93947520,93939672,93937851,93934792	Gene ID= ENSG00000100628.11 TPM= 689.8 Transcript Type= protein_coding
chr14	93945693	93948016	93945693	93948016	+	transcript2898.chr14.nnic@NA	transcript2898.chr14.nnic	NA	93945693	93948016	Gene ID= novel_gene_chr14_2899 TPM= 45.37 Transcript Type= NA
chr14	93983081	93984098	93983081	93984098	-	transcript2910.chr14.nnic@NA	transcript2910.chr14.nnic	NA	93984016,93983081	93984098,93983773	Gene ID= novel_gene_chr14_2911 TPM= 6.27 Transcript Type= NA
chr14	93983081	93987121	93983081	93987121	-	transcript2912.chr14.nnic@NA	transcript2912.chr14.nnic	NA	93986678,93983081	93987121,93983773	Gene ID= novel_gene_chr14_2913 TPM= 6.27 Transcript Type= NA
chr14	93983084	93987914	93983084	93987914	-	transcript2914.chr14.nnic@NA	transcript2914.chr14.nnic	NA	93986678,93983084	93987914,93983865	Gene ID= novel_gene_chr14_2915 TPM= 2.9 Transcript Type= NA
chr14	93987225	94008863	93987225	94008863	+	transcript2900.chr14.nnic@CCDC197	transcript2900.chr14.nnic	protein_coding	93987225,93998115,93999583,94001145,94003223,94004855,94008609	93987396,93998235,93999665,94001323,94003354,94004971,94008863	Gene ID= ENSG00000175699.14 TPM= 1.93 Transcript Type= NA
chr14	93987225	94000237	93987225	94000237	+	transcript2904.chr14.nic@CCDC197	transcript2904.chr14.nic	protein_coding	93987225,93997205,93997999	93987396,93997293,94000237	Gene ID= ENSG00000175699.14 TPM= 2.9 Transcript Type= NA
chr14	94050923	94081200	94050923	94081200	-	transcript2921.chr14.nnic@DDX24	transcript2921.chr14.nnic	protein_coding	94081119,94079025,94062475,94060913,94060098,94057822,94054996,94052998,94050923	94081200,94079747,94062621,94061066,94060613,94057897,94055184,94053127,94051462	Gene ID= ENSG00000089737.16 TPM= 12.07 Transcript Type= NA
chr14	94050965	94081202	94050965	94081202	-	ENST00000555054.1@DDX24	ENST00000555054.1	protein_coding	94081119,94079025,94062097,94060913,94060098,94057822,94054996,94052998,94050965	94081202,94079621,94062621,94061066,94060613,94057897,94055184,94053127,94051462	Gene ID= ENSG00000089737.16 TPM= 6.76 Transcript Type= protein_coding
chr14	94050920	94081198	94050920	94081198	-	ENST00000555762.1@DDX24	ENST00000555762.1	protein_coding	94081119,94079025,94062097,94060913,94060098,94054996,94052998,94050920	94081198,94079747,94062621,94061066,94060613,94057897,94053127,94051462	Gene ID= ENSG00000089737.16 TPM= 10.14 Transcript Type= retained_intron
chr14	94081329	94102709	94081329	94102709	+	ENST00000393115.7@IFI27L1	ENST00000393115.7	protein_coding	94081329,94096841,94100739,94101814,94102477	94081449,94096965,94100771,94101975,94102709	Gene ID= ENSG00000165948.10 TPM= 3.86 Transcript Type= protein_coding
chr14	94110734	94116690	94110734	94116690	+	ENST00000618863.1@IFI27	ENST00000618863.1	protein_coding	94110734,94114851,94115781,94116442	94110797,94114880,94115942,94116690	Gene ID= ENSG00000165949.12 TPM= 1.93 Transcript Type= protein_coding
chr14	94110749	94116695	94110749	94116695	+	ENST00000621160.4@IFI27	ENST00000621160.4	protein_coding	94110749,94111625,94114851,94115781,94116442	94110797,94111773,94114880,94115942,94116695	Gene ID= ENSG00000165949.12 TPM= 12.55 Transcript Type= protein_coding
chr14	94127781	94129664	94127781	94129664	-	ENST00000238609.3@IFI27L2	ENST00000238609.3	protein_coding	94129558,94129262,94128514,94127781	94129664,94129291,94128675,94127992	Gene ID= ENSG00000119632.3 TPM= 4.83 Transcript Type= protein_coding
chr14	94378376	94390693	94378376	94390693	-	ENST00000393088.8@SERPINA1	ENST00000393088.8	protein_coding	94390457,94388801,94388560,94382592,94380871,94379464,94378376	94390693,94389010,94388663,94383241,94381141,94379611,94378640	Gene ID= ENSG00000197249.13 TPM= 2.9 Transcript Type= protein_coding
chr14	94581369	94593120	94581369	94593120	+	ENST00000329597.11@SERPINA5	ENST00000329597.11	protein_coding	94581369,94581615,94587346,94590041,94590749,94592057	94581490,94581710,94587981,94590311,94590896,94593120	Gene ID= ENSG00000188488.13 TPM= 21.07 Transcript Type= protein_coding
chr14	94581394	94593115	94581394	94593115	+	ENST00000554866.5@SERPINA5	ENST00000554866.5	protein_coding	94581394,94587346,94590041,94590749,94592057	94581490,94587981,94590311,94590896,94593115	Gene ID= ENSG00000188488.13 TPM= 52.93 Transcript Type= protein_coding
chr14	94581615	94593115	94581615	94593115	+	ENST00000554276.1@SERPINA5	ENST00000554276.1	protein_coding	94581615,94587346,94590041,94590749,94592057	94581710,94587981,94590311,94590896,94593115	Gene ID= ENSG00000188488.13 TPM= 14.8 Transcript Type= protein_coding
chr14	94612377	94624052	94612377	94624052	+	ENST00000393078.4@SERPINA3	ENST00000393078.4	protein_coding	94612377,94614434,94619195,94622341,94623611	94612447,94615084,94619468,94622491,94624052	Gene ID= ENSG00000196136.17 TPM= 105.7 Transcript Type= protein_coding
chr14	94612391	94624054	94612391	94624054	+	ENST00000467132.5@SERPINA3	ENST00000467132.5	protein_coding	94612391,94613347,94619195,94622341,94623611	94612443,94615084,94619468,94622491,94624054	Gene ID= ENSG00000196136.17 TPM= 17.86 Transcript Type= protein_coding
chr14	94612384	94624055	94612384	94624055	+	ENST00000393080.8@SERPINA3	ENST00000393080.8	protein_coding	94612384,94614434,94619195,94622341,94623611	94612443,94615084,94619468,94622491,94624055	Gene ID= ENSG00000196136.17 TPM= 63.71 Transcript Type= protein_coding
chr14	94612405	94624054	94612405	94624054	+	ENST00000556968.2@SERPINA3	ENST00000556968.2	protein_coding	94612405,94614434,94622341,94623611	94612447,94615084,94622491,94624054	Gene ID= ENSG00000196136.17 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr14	94768216	94770230	94768216	94770230	-	ENST00000238558.4@GSC	ENST00000238558.4	protein_coding	94769661,94768958,94768216	94770230,94769217,94768649	Gene ID= ENSG00000133937.4 TPM= 1.93 Transcript Type= protein_coding
chr14	95153089	95154879	95153089	95154879	+	transcript2953.chr14.nnic@NA	transcript2953.chr14.nnic	NA	95153089	95154879	Gene ID= novel_gene_chr14_2954 TPM= 1.93 Transcript Type= NA
chr14	95157679	95179925	95157679	95179925	+	transcript2956.chr14.nic@DICER1-AS1	transcript2956.chr14.nic	antisense_RNA	95157679,95158876,95179499	95158234,95159035,95179925	Gene ID= ENSG00000235706.7 TPM= 1.93 Transcript Type= NA
chr14	95157669	95179925	95157669	95179925	+	transcript2958.chr14.nic@DICER1-AS1	transcript2958.chr14.nic	antisense_RNA	95157669,95179504	95159035,95179925	Gene ID= ENSG00000235706.7 TPM= 3.86 Transcript Type= NA
chr14	95157676	95179925	95157676	95179925	+	transcript2959.chr14.nic@DICER1-AS1	transcript2959.chr14.nic	antisense_RNA	95157676,95179499	95159035,95179925	Gene ID= ENSG00000235706.7 TPM= 1.93 Transcript Type= NA
chr14	95532912	95534642	95532912	95534642	-	transcript2969.chr14.nnic@NA	transcript2969.chr14.nnic	NA	95532912	95534642	Gene ID= novel_gene_chr14_2970 TPM= 2.9 Transcript Type= NA
chr14	95534593	95544718	95534593	95544718	+	ENST00000331334.4@GLRX5	ENST00000331334.4	protein_coding	95534593,95543947	95535384,95544718	Gene ID= ENSG00000182512.4 TPM= 56.95 Transcript Type= protein_coding
chr14	96281257	96284482	96281257	96284482	-	transcript2974.chr14.nnic@NA	transcript2974.chr14.nnic	NA	96281257	96284482	Gene ID= novel_gene_chr14_2975 TPM= 2.9 Transcript Type= NA
chr14	96363477	96387288	96363477	96387288	+	ENST00000555181.5@GSKIP	ENST00000555181.5	protein_coding	96363477,96379688,96382247,96385523	96363568,96379788,96382505,96387288	Gene ID= ENSG00000100744.14 TPM= 5.79 Transcript Type= protein_coding
chr14	96502390	96547904	96502390	96547904	+	transcript2988.chr14.nic@PAPOLA	transcript2988.chr14.nic	protein_coding	96502390,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511,96534491,96535879,96536976,96542243,96542774,96544149,96547797	96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96532649,96534563,96535999,96537060,96542296,96542893,96544258,96547904	Gene ID= ENSG00000090060.17 TPM= 4.83 Transcript Type= NA
chr14	96502373	96567111	96502373	96567111	+	ENST00000216277.12@PAPOLA	ENST00000216277.12	protein_coding	96502373,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511,96534491,96535879,96536976,96542243,96542774,96544149,96547797,96552480,96555847,96556175,96560649,96562819,96564955	96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96532649,96534563,96535999,96537060,96542296,96542893,96544258,96547918,96552622,96555947,96556413,96560711,96562893,96567111	Gene ID= ENSG00000090060.17 TPM= 27.99 Transcript Type= protein_coding
chr14	96502401	96534885	96502401	96534885	+	ENST00000557320.5@PAPOLA	ENST00000557320.5	protein_coding	96502401,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511	96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96534885	Gene ID= ENSG00000090060.17 TPM= 18.34 Transcript Type= protein_coding
chr14	96501648	96502329	96501648	96502329	-	transcript2997.chr14.nnic@NA	transcript2997.chr14.nnic	NA	96501648	96502329	Gene ID= novel_gene_chr14_2998 TPM= 2.9 Transcript Type= NA
chr14	96797304	96881613	96797304	96881613	+	ENST00000216639.7@VRK1	ENST00000216639.7	protein_coding	96797304,96833467,96837762,96846095,96847257,96852831,96853074,96855224,96856130,96856528,96860557,96876030,96881177	96797447,96833631,96837817,96846164,96847344,96852939,96853166,96855356,96856250,96856586,96860735,96876120,96881613	Gene ID= ENSG00000100749.7 TPM= 5.79 Transcript Type= protein_coding
chr14	99397746	99480920	99397746	99480920	-	transcript3012.chr14.nic@SETD3	transcript3012.chr14.nic	protein_coding	99480728,99465703,99463486,99459113,99458279,99413876,99412951,99406516,99405205,99404225,99400099,99397746	99480920,99465813,99463578,99459185,99458535,99413934,99413065,99406590,99405371,99404310,99400259,99399125	Gene ID= ENSG00000183576.12 TPM= 8.88 Transcript Type= NA
chr14	99397746	99480879	99397746	99480879	-	ENST00000331768.9@SETD3	ENST00000331768.9	protein_coding	99480728,99465703,99463486,99461192,99459113,99458279,99413876,99412951,99406516,99405205,99404225,99400099,99397746	99480879,99465813,99463578,99461340,99459185,99458535,99413934,99413065,99406590,99405371,99404310,99400259,99399125	Gene ID= ENSG00000183576.12 TPM= 264.93 Transcript Type= protein_coding
chr14	99409804	99480788	99409804	99480788	-	ENST00000329331.7@SETD3	ENST00000329331.7	protein_coding	99480728,99465703,99463486,99461192,99459113,99458279,99413876,99412951,99409804	99480788,99465813,99463578,99461340,99459185,99458535,99413934,99413065,99410215	Gene ID= ENSG00000183576.12 TPM= 5.26 Transcript Type= protein_coding
chr14	99510624	99511306	99510624	99511306	+	transcript3023.chr14.nnic@NA	transcript3023.chr14.nnic	NA	99510624	99511306	Gene ID= novel_gene_chr14_3024 TPM= 4.83 Transcript Type= NA
chr14	99645110	99680569	99645110	99680569	+	ENST00000330710.9@HHIPL1	ENST00000330710.9	protein_coding	99645110,99652224,99657000,99659428,99660280,99662876,99668222,99672317,99675091	99645462,99652870,99657143,99659756,99660406,99663021,99668303,99672399,99680569	Gene ID= ENSG00000182218.9 TPM= 1.93 Transcript Type= protein_coding
chr14	99737696	99941302	99737696	99941302	+	transcript3026.chr14.nnic@EML1	transcript3026.chr14.nnic	protein_coding	99737696,99850853,99865514,99878485,99891199,99892139,99894629,99897145,99898233,99900929,99907638,99909345,99910242,99911422,99914179,99914566,99917782,99920789,99936029,99936247,99937817,99939197,99939987	99737860,99851035,99865646,99878619,99891227,99892195,99894758,99897294,99898302,99901039,99907733,99909479,99910341,99911576,99914304,99914697,99917849,99920877,99936126,99936334,99937912,99939327,99941302	Gene ID= ENSG00000066629.16 TPM= 2.9 Transcript Type= NA
chr14	99737696	99941537	99737696	99941537	+	transcript3030.chr14.nic@EML1	transcript3030.chr14.nic	protein_coding	99737696,99850853,99865514,99878485,99891199,99894629,99897145,99898233,99900929,99907638,99909345,99910242,99911422,99914179,99914566,99917782,99920789,99936029,99936247,99937817,99939197,99939987	99737860,99851035,99865646,99878619,99891227,99894758,99897294,99898302,99901039,99907733,99909479,99910341,99911576,99914304,99914697,99917849,99920877,99936126,99936334,99937912,99939327,99941537	Gene ID= ENSG00000066629.16 TPM= 1.93 Transcript Type= NA
chr14	99793338	99942060	99793338	99942060	+	ENST00000262233.10@EML1	ENST00000262233.10	protein_coding	99793338,99850853,99865514,99878485,99891199,99894629,99897145,99898233,99900929,99907638,99909345,99910242,99911422,99914179,99914566,99917782,99920789,99936029,99936247,99937817,99939197,99939987	99793543,99851035,99865646,99878619,99891227,99894758,99897294,99898302,99901039,99907733,99909479,99910341,99911576,99914304,99914697,99917849,99920877,99936126,99936334,99937912,99939327,99942060	Gene ID= ENSG00000066629.16 TPM= 1.93 Transcript Type= protein_coding
chr14	99971449	100144236	99971449	100144236	+	ENST00000402714.6@EVL	ENST00000402714.6	protein_coding	99971449,100084687,100097481,100123539,100126707,100128519,100129563,100132719,100135905,100137578,100137740,100141180,100141736,100143701	99972057,100084855,100097658,100123602,100126771,100128748,100129684,100132779,100135968,100137644,100137802,100141246,100141793,100144236	Gene ID= ENSG00000196405.12 TPM= 6.76 Transcript Type= protein_coding
chr14	100238298	100239182	100238298	100239182	-	transcript3043.chr14.nnic@NA	transcript3043.chr14.nnic	NA	100238298	100239182	Gene ID= novel_gene_chr14_3044 TPM= 10.62 Transcript Type= NA
chr14	100291111	100306533	100291111	100306533	-	ENST00000359232.7@SLC25A29	ENST00000359232.7	protein_coding	100306199,100298842,100293294,100291111	100306533,100298885,100293377,100293032	Gene ID= ENSG00000197119.12 TPM= 8.69 Transcript Type= protein_coding
chr14	100291116	100296545	100291116	100296545	-	ENST00000554912.1@SLC25A29	ENST00000554912.1	protein_coding	100293294,100291116	100296545,100293032	Gene ID= ENSG00000197119.12 TPM= 1.93 Transcript Type= protein_coding
chr14	100333788	100375636	100333788	100375636	-	transcript3055.chr14.nnic@WARS	transcript3055.chr14.nnic	protein_coding	100375511,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333788	100375636,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 27.99 Transcript Type= NA
chr14	100333818	100376805	100333818	100376805	-	ENST00000355338.6@WARS	ENST00000355338.6	protein_coding	100376260,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333818	100376805,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 6.76 Transcript Type= protein_coding
chr14	100333802	100376335	100333802	100376335	-	ENST00000358655.8@WARS	ENST00000358655.8	protein_coding	100376260,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333802	100376335,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 15.44 Transcript Type= protein_coding
chr14	100376439	100530303	100376439	100530303	+	ENST00000402312.7@WDR25	ENST00000402312.7	protein_coding	100376439,100380910,100468021,100483994,100525870,100529068,100529820	100376495,100381746,100468168,100484124,100526040,100529208,100530303	Gene ID= ENSG00000176473.13 TPM= 5.31 Transcript Type= protein_coding
chr14	100376494	100530303	100376494	100530303	+	ENST00000335290.10@WDR25	ENST00000335290.10	protein_coding	100376494,100380910,100468021,100483994,100525870,100529068,100529820	100376704,100381746,100468168,100484124,100526040,100529208,100530303	Gene ID= ENSG00000176473.13 TPM= 10.14 Transcript Type= protein_coding
chr14	100726827	100738224	100726827	100738224	+	ENST00000341267.8@DLK1	ENST00000341267.8	protein_coding	100726827,100728396,100728936,100732042,100734149	100727135,100728459,100729066,100732183,100738224	Gene ID= ENSG00000185559.13 TPM= 31.86 Transcript Type= protein_coding
chr14	100826118	100861026	100826118	100861026	+	transcript3081.chr14.nnic@MEG3	transcript3081.chr14.nnic	lincRNA	100826118,100828708,100829034,100831421,100836167,100845458,100860691	100826217,100828816,100829787,100831534,100836300,100845533,100861026	Gene ID= ENSG00000214548.14 TPM= 4.34 Transcript Type= NA
chr14	100826126	100861031	100826126	100861031	+	ENST00000451743.6@MEG3	ENST00000451743.6	lincRNA	100826126,100828708,100829034,100831421,100836167,100845458,100860691	100826217,100828816,100829749,100831534,100836300,100845533,100861031	Gene ID= ENSG00000214548.14 TPM= 4.34 Transcript Type= lincRNA
chr14	101557304	101560431	101557304	101560431	-	ENST00000557661.1@DIO3OS	ENST00000557661.1	lincRNA	101560252,101559800,101557304	101560431,101560025,101558834	Gene ID= ENSG00000258498.8 TPM= 3.86 Transcript Type= lincRNA
chr14	101557304	101560411	101557304	101560411	-	ENST00000554735.1@DIO3OS	ENST00000554735.1	lincRNA	101557304	101560411	Gene ID= ENSG00000258498.8 TPM= 2.9 Transcript Type= lincRNA
chr14	101761657	101912625	101761657	101912625	+	transcript3099.chr14.nic@PPP2R5C	transcript3099.chr14.nic	protein_coding	101761657,101762905,101786018,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401	101761920,101762970,101786183,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912625	Gene ID= ENSG00000078304.19 TPM= 5.79 Transcript Type= NA
chr14	101809803	101927519	101809803	101927519	+	ENST00000350249.7@PPP2R5C	ENST00000350249.7	protein_coding	101809803,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101925141	101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101927519	Gene ID= ENSG00000078304.19 TPM= 1.93 Transcript Type= protein_coding
chr14	101761885	101927685	101761885	101927685	+	ENST00000328724.9@PPP2R5C	ENST00000328724.9	protein_coding	101761885,101762905,101786018,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101925141	101761920,101762970,101786183,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101927685	Gene ID= ENSG00000078304.19 TPM= 4.83 Transcript Type= protein_coding
chr14	101809895	101912625	101809895	101912625	+	ENST00000445439.7@PPP2R5C	ENST00000445439.7	protein_coding	101809895,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401	101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912625	Gene ID= ENSG00000078304.19 TPM= 6.76 Transcript Type= protein_coding
chr14	101948347	101949425	101948347	101949425	+	ENST00000607414.1@AL118558.3	ENST00000607414.1	lincRNA	101948347	101949425	Gene ID= ENSG00000271780.1 TPM= 1.93 Transcript Type= lincRNA
chr14	101964495	101983472	101964495	101983472	+	transcript3126.chr14.nic@DYNC1H1	transcript3126.chr14.nic	protein_coding	101964495,101975712,101979319,101979719,101980364,101983019,101983382	101964947,101975799,101979492,101979974,101980550,101983290,101983472	Gene ID= ENSG00000197102.10 TPM= 59.85 Transcript Type= NA
chr14	101964528	102050791	101964528	102050791	+	ENST00000360184.8@DYNC1H1	ENST00000360184.8	protein_coding	101964528,101975712,101979319,101979719,101980364,101983019,101983382,101985687,101987453,101988703,101991527,101994184,101994673,101994986,101995181,101997035,101999989,102000286,102000954,102001145,102001535,102002537,102002792,102004518,102004762,102005042,102005888,102007008,102008178,102009843,102010276,102010740,102011875,102012314,102015105,102015856,102016349,102016766,102017088,102017383,102018451,102019893,102022751,102026574,102027174,102027383,102027619,102027937,102029539,102029819,102030162,102032272,102033065,102033269,102033976,102034325,102036489,102038460,102038698,102039001,102039412,102039638,102040236,102040598,102041574,102042013,102042228,102042384,102042635,102043875,102044274,102044595,102047817,102048516,102049440,102049714,102050071,102050435	101964947,101975799,101979492,101979974,101980550,101983290,101983609,101986763,101987632,101988852,101991673,101994324,101994849,101995096,101995300,101997274,102000144,102000399,102001064,102001354,102001681,102002703,102002965,102004683,102004950,102005236,102006170,102007108,102008337,102010086,102010459,102010952,102012113,102012470,102015332,102016086,102016489,102016999,102017294,102017504,102018616,102020056,102022880,102026707,102027288,102027544,102027833,102028141,102029712,102029938,102030282,102032467,102033182,102033484,102034188,102034452,102036642,102038606,102038848,102039254,102039546,102039732,102040410,102040673,102041734,102042124,102042288,102042507,102042748,102044045,102044491,102044698,102048028,102048669,102049582,102049882,102050198,102050791	Gene ID= ENSG00000197102.10 TPM= 199.82 Transcript Type= protein_coding
chr14	101964573	101966420	101964573	101966420	+	transcript3128.chr14.nnic@NA	transcript3128.chr14.nnic	NA	101964573	101966420	Gene ID= novel_gene_chr14_3129 TPM= 2.9 Transcript Type= NA
chr14	102139844	102223673	102139844	102223673	+	ENST00000335263.9@WDR20	ENST00000335263.9	protein_coding	102139844,102194938,102208603,102222830	102140172,102195120,102209862,102223673	Gene ID= ENSG00000140153.17 TPM= 4.83 Transcript Type= protein_coding
chr14	102139884	102210530	102139884	102210530	+	transcript3149.chr14.nic@WDR20	transcript3149.chr14.nic	protein_coding	102139884,102193463,102194938,102208603	102140172,102193514,102195120,102210530	Gene ID= ENSG00000140153.17 TPM= 2.17 Transcript Type= NA
chr14	102139867	102223673	102139867	102223673	+	transcript3154.chr14.nic@WDR20	transcript3154.chr14.nic	protein_coding	102139867,102194938,102222830	102140172,102195120,102223673	Gene ID= ENSG00000140153.17 TPM= 1.93 Transcript Type= NA
chr14	102139893	102210530	102139893	102210530	+	transcript3156.chr14.nic@WDR20	transcript3156.chr14.nic	protein_coding	102139893,102194938,102208603	102139987,102195120,102210530	Gene ID= ENSG00000140153.17 TPM= 2.17 Transcript Type= NA
chr14	102139893	102210530	102139893	102210530	+	ENST00000342702.7@WDR20	ENST00000342702.7	protein_coding	102139893,102194938,102208603	102140172,102195120,102210530	Gene ID= ENSG00000140153.17 TPM= 7 Transcript Type= protein_coding
chr14	102139911	102210525	102139911	102210525	+	ENST00000299135.6@WDR20	ENST00000299135.6	protein_coding	102139911,102193463,102208603	102140172,102193475,102210525	Gene ID= ENSG00000140153.17 TPM= 2.17 Transcript Type= protein_coding
chr14	102319725	102342367	102319725	102342367	+	transcript3166.chr14.nic@ZNF839	transcript3166.chr14.nic	protein_coding	102319725,102325985,102331622,102334554,102335689,102338816,102339094,102342103	102320053,102326887,102331846,102334646,102335838,102338953,102339223,102342367	Gene ID= ENSG00000022976.15 TPM= 8.69 Transcript Type= NA
chr14	102319751	102342367	102319751	102342367	+	ENST00000442396.6@ZNF839	ENST00000442396.6	protein_coding	102319751,102325985,102331622,102334554,102335689,102338816,102339094,102341323	102320053,102326887,102331846,102334646,102335838,102338953,102339223,102342367	Gene ID= ENSG00000022976.15 TPM= 39.58 Transcript Type= protein_coding
chr14	102341102	102362916	102341102	102362916	-	ENST00000559514.5@CINP	ENST00000559514.5	protein_coding	102362845,102359419,102355768,102349919,102348279,102341102	102362916,102359587,102355897,102350048,102348759,102344389	Gene ID= ENSG00000100865.14 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr14	102348282	102362892	102348282	102362892	-	ENST00000216756.10@CINP	ENST00000216756.10	protein_coding	102362845,102359419,102355768,102349919,102348282	102362892,102359587,102355897,102350048,102348759	Gene ID= ENSG00000100865.14 TPM= 34.75 Transcript Type= protein_coding
chr14	102362963	102502481	102362963	102502481	+	ENST00000359520.11@TECPR2	ENST00000359520.11	protein_coding	102362963,102376650,102407338,102408488,102414636,102424979,102428250,102431796,102434235,102438022,102440436,102443647,102445806,102449629,102450560,102452394,102465141,102496979,102497570,102498103	102363116,102376940,102407466,102408619,102414793,102425291,102428382,102432128,102435211,102438205,102440609,102443827,102445947,102449869,102450649,102452627,102465289,102497120,102497719,102502481	Gene ID= ENSG00000196663.15 TPM= 14.48 Transcript Type= protein_coding
chr14	102506842	102509718	102506842	102509718	-	transcript3181.chr14.nnic@ANKRD9	transcript3181.chr14.nnic	protein_coding	102509529,102508641,102508475,102506842	102509718,102508650,102508549,102507942	Gene ID= ENSG00000156381.8 TPM= 32.82 Transcript Type= NA
chr14	102501760	102509791	102501760	102509791	-	ENST00000286918.8@ANKRD9	ENST00000286918.8	protein_coding	102509529,102508641,102508475,102501760	102509791,102508846,102508549,102507942	Gene ID= ENSG00000156381.8 TPM= 13.51 Transcript Type= protein_coding
chr14	102506876	102509799	102506876	102509799	-	ENST00000560748.5@ANKRD9	ENST00000560748.5	protein_coding	102509529,102508475,102506876	102509799,102508549,102507942	Gene ID= ENSG00000156381.8 TPM= 314.69 Transcript Type= protein_coding
chr14	102592631	102730551	102592631	102730551	+	transcript3195.chr14.nnic@RCOR1	transcript3195.chr14.nnic	protein_coding	102592631,102593266,102681895,102701278,102707351,102708465,102710935,102714423,102721007,102721320,102722187,102726468,102729876	102593187,102593325,102681978,102701330,102707512,102708583,102711013,102714617,102721084,102721377,102722416,102726561,102730551	Gene ID= ENSG00000089902.9 TPM= 1.93 Transcript Type= NA
chr14	102592661	102730576	102592661	102730576	+	ENST00000262241.6@RCOR1	ENST00000262241.6	protein_coding	102592661,102593266,102681895,102701278,102707351,102708465,102710935,102714423,102721007,102721320,102722187,102726468	102593187,102593325,102681978,102701330,102707512,102708583,102711013,102714617,102721084,102721377,102722416,102730576	Gene ID= ENSG00000089902.9 TPM= 18.34 Transcript Type= protein_coding
chr14	102975725	103057602	102975725	103057602	-	transcript3210.chr14.nic@CDC42BPB	transcript3210.chr14.nic	protein_coding	103056999,103012097,103008472,103003928,102999565,102986487,102983556,102980773,102978126,102975883,102975725	103057602,103012188,103008555,103004023,102999713,102986580,102983756,102981021,102978205,102976049,102975803	Gene ID= ENSG00000198752.10 TPM= 2.9 Transcript Type= NA
chr14	102932379	103057462	102932379	103057462	-	ENST00000361246.6@CDC42BPB	ENST00000361246.6	protein_coding	103056999,103012097,103008472,103003928,102999565,102986487,102983556,102980773,102978126,102975883,102975684,102974016,102971919,102970151,102968472,102968253,102967046,102966282,102964502,102963061,102959631,102954602,102954198,102952498,102950466,102949765,102947721,102946468,102945662,102943891,102940227,102940046,102939830,102939610,102938306,102938104,102932379	103057462,103012188,103008555,103004023,102999713,102986580,102983756,102981021,102978205,102976049,102975803,102974149,102972161,102970261,102968716,102968358,102967170,102966387,102964650,102963155,102959710,102954688,102954275,102952603,102950602,102949904,102947802,102946684,102945724,102944487,102940324,102940130,102939947,102939727,102938411,102938174,102933843	Gene ID= ENSG00000198752.10 TPM= 7.72 Transcript Type= protein_coding
chr14	103123461	103137439	103123461	103137439	+	ENST00000560869.5@TNFAIP2	ENST00000560869.5	protein_coding	103123461,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219	103123951,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103137439	Gene ID= ENSG00000185215.8 TPM= 22.2 Transcript Type= protein_coding
chr14	103204887	103207235	103204887	103207235	-	transcript3219.chr14.nnic@NA	transcript3219.chr14.nnic	NA	103204887	103207235	Gene ID= novel_gene_chr14_3220 TPM= 2.9 Transcript Type= NA
chr14	103207352	103208875	103207352	103208875	+	transcript3221.chr14.nnic@NA	transcript3221.chr14.nnic	NA	103207352	103208875	Gene ID= novel_gene_chr14_3222 TPM= 5.79 Transcript Type= NA
chr14	103332907	103334770	103332907	103334770	-	transcript3250.chr14.nnic@NA	transcript3250.chr14.nnic	NA	103332907	103334770	Gene ID= novel_gene_chr14_3251 TPM= 7.72 Transcript Type= NA
chr14	103334002	103345025	103334002	103345025	+	ENST00000216554.7@EIF5	ENST00000216554.7	protein_coding	103334002,103334389,103335653,103336036,103336677,103337116,103338327,103338735,103339172,103339639,103340427,103340963	103334260,103334597,103335932,103336117,103336849,103337227,103338472,103338893,103339333,103339803,103340561,103345025	Gene ID= ENSG00000100664.10 TPM= 110.61 Transcript Type= protein_coding
chr14	103334861	103342640	103334861	103342640	+	ENST00000392715.6@EIF5	ENST00000392715.6	protein_coding	103334861,103335653,103336036,103336677,103337116,103338327,103338735,103339172,103339639,103340427,103340963	103335185,103335932,103336117,103336849,103337227,103338472,103338893,103339333,103339803,103340561,103342640	Gene ID= ENSG00000100664.10 TPM= 2.25 Transcript Type= protein_coding
chr14	103385364	103503827	103385364	103503827	+	transcript3273.chr14.nic@MARK3	transcript3273.chr14.nic	protein_coding	103385364,103405076,103428387,103448919,103451918,103457142,103462405,103465557,103465972,103466343,103467079,103468081,103474993,103480387,103491777,103498502,103500156,103502882	103386080,103405267,103428440,103448967,103451983,103457212,103462461,103465793,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103498528,103500200,103503827	Gene ID= ENSG00000075413.17 TPM= 6.35 Transcript Type= NA
chr14	103519659	103523111	103519659	103523111	-	ENST00000348956.6@CKB	ENST00000348956.6	protein_coding	103522766,103522301,103522023,103521818,103521263,103520469,103520122,103519659	103523111,103522505,103522177,103521950,103521434,103520592,103520311,103520042	Gene ID= ENSG00000166165.12 TPM= 59.85 Transcript Type= protein_coding
chr14	103519679	103521443	103519679	103521443	-	ENST00000554282.5@CKB	ENST00000554282.5	protein_coding	103521263,103520122,103519679	103521443,103520311,103520042	Gene ID= ENSG00000166165.12 TPM= 2.9 Transcript Type= retained_intron
chr14	103529169	103536045	103529169	103536045	+	transcript3329.chr14.nnic@TRMT61A	transcript3329.chr14.nnic	protein_coding	103529169,103530150,103532582,103534550	103529261,103530309,103532848,103536045	Gene ID= ENSG00000166166.12 TPM= 8.69 Transcript Type= NA
chr14	103529184	103537073	103529184	103537073	+	ENST00000389749.8@TRMT61A	ENST00000389749.8	protein_coding	103529184,103529950,103532582,103534550	103529261,103530309,103532848,103537073	Gene ID= ENSG00000166166.12 TPM= 12.55 Transcript Type= protein_coding
chr14	103562965	103590896	103562965	103590896	+	transcript3311.chr14.nic@APOPT1	transcript3311.chr14.nic	protein_coding	103562965,103571623,103574107,103579371,103587274,103590181	103563124,103571820,103574170,103579491,103587364,103590896	Gene ID= ENSG00000256053.7 TPM= 11.1 Transcript Type= NA
chr14	103562962	103592187	103562962	103592187	+	ENST00000409074.6@APOPT1	ENST00000409074.6	protein_coding	103562962,103571623,103574107,103587274,103590181	103563124,103571820,103574170,103587364,103592187	Gene ID= ENSG00000256053.7 TPM= 1.93 Transcript Type= protein_coding
chr14	103629170	103685896	103629170	103685896	+	transcript3366.chr14.nic@KLC1	transcript3366.chr14.nic	protein_coding	103629170,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103684986,103685638	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103685036,103685896	Gene ID= ENSG00000126214.21 TPM= 19.11 Transcript Type= NA
chr14	103629241	103701514	103629241	103701514	+	ENST00000557450.5@KLC1	ENST00000557450.5	protein_coding	103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103700727,103701514	Gene ID= ENSG00000126214.21 TPM= 41.51 Transcript Type= protein_coding
chr14	103629241	103701544	103629241	103701544	+	ENST00000452929.6@KLC1	ENST00000452929.6	protein_coding	103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103687211,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 20.27 Transcript Type= protein_coding
chr14	103629241	103701544	103629241	103701544	+	ENST00000554280.5@KLC1	ENST00000554280.5	protein_coding	103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103687211,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 9.65 Transcript Type= protein_coding
chr14	103699922	103701544	103699922	103701544	+	ENST00000556986.1@KLC1	ENST00000556986.1	protein_coding	103699922,103701201	103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 9.65 Transcript Type= retained_intron
chr14	103687246	103690192	103687246	103690192	+	transcript3382.chr14.nnic@NA	transcript3382.chr14.nnic	NA	103687246	103690192	Gene ID= novel_gene_chr14_3383 TPM= 1.93 Transcript Type= NA
chr14	103694252	103698026	103694252	103698026	-	transcript3384.chr14.nnic@NA	transcript3384.chr14.nnic	NA	103694252	103698026	Gene ID= novel_gene_chr14_3385 TPM= 21.24 Transcript Type= NA
chr14	103697618	103715469	103697618	103715469	-	ENST00000555055.5@XRCC3	ENST00000555055.5	protein_coding	103715424,103712875,103711466,103711033,103708522,103707003,103703173,103699364,103699133,103697618	103715469,103712931,103711567,103711245,103708659,103707215,103703327,103699576,103699179,103699017	Gene ID= ENSG00000126215.13 TPM= 1.45 Transcript Type= protein_coding
chr14	103697617	103715504	103697617	103715504	-	ENST00000352127.11@XRCC3	ENST00000352127.11	protein_coding	103715424,103711466,103711033,103708522,103707003,103703173,103699364,103699133,103697617	103715504,103711567,103711245,103708659,103707215,103703327,103699576,103699179,103699017	Gene ID= ENSG00000126215.13 TPM= 1.45 Transcript Type= protein_coding
chr14	103715730	103733668	103715730	103733668	+	ENST00000216602.10@ZFYVE21	ENST00000216602.10	protein_coding	103715730,103726792,103727746,103728908,103729091,103729793,103732620,103732983	103715979,103726842,103727914,103728983,103729182,103729846,103732762,103733668	Gene ID= ENSG00000100711.13 TPM= 19.31 Transcript Type= protein_coding
chr14	103715808	103733662	103715808	103733662	+	ENST00000311141.6@ZFYVE21	ENST00000311141.6	protein_coding	103715808,103726792,103727746,103728908,103729091,103732620,103732983	103715979,103726842,103727914,103728983,103729182,103732762,103733662	Gene ID= ENSG00000100711.13 TPM= 17.38 Transcript Type= protein_coding
chr14	103912288	103921557	103912288	103921557	-	ENST00000286953.7@C14orf2	ENST00000286953.7	protein_coding	103921470,103915066,103913961,103912288	103921557,103915189,103913984,103912694	Gene ID= ENSG00000156411.9 TPM= 56.95 Transcript Type= protein_coding
chr14	103912302	103921501	103912302	103921501	-	ENST00000414262.6@C14orf2	ENST00000414262.6	protein_coding	103921470,103920940,103915066,103913961,103912302	103921501,103921208,103915189,103913984,103912694	Gene ID= ENSG00000156411.9 TPM= 1.93 Transcript Type= protein_coding
chr14	104139040	104180894	104139040	104180894	+	ENST00000315264.7@KIF26A	ENST00000315264.7	protein_coding	104139040,104152015,104157755,104166859,104171723,104172575,104172977,104173330,104173706,104174148,104174982,104178550,104179236,104179609	104139288,104152461,104157942,104167048,104171935,104172668,104173239,104173513,104173868,104174310,104177898,104178755,104179386,104180894	Gene ID= ENSG00000066735.14 TPM= 2.9 Transcript Type= protein_coding
chr14	104579684	104590515	104579684	104590515	+	ENST00000557649.5@C14orf180	ENST00000557649.5	protein_coding	104579684,104586415,104587749,104588274,104588578	104580003,104586541,104587878,104588309,104590515	Gene ID= ENSG00000184601.10 TPM= 6.27 Transcript Type= protein_coding
chr14	104581141	104589808	104581141	104589808	+	ENST00000410013.1@C14orf180	ENST00000410013.1	protein_coding	104581141,104586415,104587749,104588274,104588578	104581625,104586541,104587878,104588309,104589808	Gene ID= ENSG00000184601.10 TPM= 2.41 Transcript Type= protein_coding
chr14	104689637	104719603	104689637	104719603	+	ENST00000392634.8@INF2	ENST00000392634.8	protein_coding	104689637,104701357,104703105,104703295,104703916,104706035,104706910,104707253,104708436,104708671,104709281,104709620,104710088,104710937,104711079,104711629,104712433,104712828,104713207,104713445,104714203,104715284,104718795	104689739,104701756,104703220,104703454,104703949,104706176,104707051,104708002,104708587,104708732,104709383,104709705,104710188,104711007,104711186,104711699,104712553,104712992,104713309,104713606,104714856,104715340,104719603	Gene ID= ENSG00000203485.12 TPM= 8.69 Transcript Type= protein_coding
chr14	104717345	104719603	104717345	104719603	+	transcript3408.chr14.nnic@NA	transcript3408.chr14.nnic	NA	104717345	104719603	Gene ID= novel_gene_chr14_3409 TPM= 6.76 Transcript Type= NA
chr14	104724186	104747310	104724186	104747310	+	ENST00000330877.6@ADSSL1	ENST00000330877.6	protein_coding	104724186,104735020,104738376,104739328,104739750,104740601,104740839,104741117,104741848,104743067,104744812,104746236,104746951	104724462,104735122,104738438,104739378,104739816,104740708,104740920,104741243,104742002,104743191,104744909,104746385,104747310	Gene ID= ENSG00000185100.10 TPM= 713.75 Transcript Type= protein_coding
chr14	104753137	104759654	104753137	104759654	+	transcript3443.chr14.nnic@SIVA1	transcript3443.chr14.nnic	protein_coding	104753137,104755630,104756604,104759219	104753319,104755824,104756760,104759654	Gene ID= ENSG00000184990.12 TPM= 6.76 Transcript Type= NA
chr14	104753100	104759657	104753100	104759657	+	ENST00000329967.10@SIVA1	ENST00000329967.10	protein_coding	104753100,104755630,104756604,104759428	104753319,104755824,104756760,104759657	Gene ID= ENSG00000184990.12 TPM= 105.22 Transcript Type= protein_coding
chr14	104753159	104759659	104753159	104759659	+	ENST00000347067.9@SIVA1	ENST00000347067.9	protein_coding	104753159,104756604,104759428	104753319,104756760,104759659	Gene ID= ENSG00000184990.12 TPM= 1.93 Transcript Type= protein_coding
chr14	104769349	104795767	104769349	104795767	-	transcript3455.chr14.nic@AKT1	transcript3455.chr14.nic	protein_coding	104795484,104793127,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349	104795767,104793304,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420	Gene ID= ENSG00000142208.15 TPM= 25.78 Transcript Type= NA
chr14	104769349	104795755	104769349	104795755	-	transcript3456.chr14.nnic@AKT1	transcript3456.chr14.nnic	protein_coding	104795484,104794119,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349	104795755,104794261,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420	Gene ID= ENSG00000142208.15 TPM= 15.17 Transcript Type= NA
chr14	104769349	104795751	104769349	104795751	-	ENST00000349310.7@AKT1	ENST00000349310.7	protein_coding	104795484,104793127,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349	104795751,104793210,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420	Gene ID= ENSG00000142208.15 TPM= 11.3 Transcript Type= protein_coding
chr14	104769349	104795679	104769349	104795679	-	ENST00000407796.6@AKT1	ENST00000407796.6	protein_coding	104795484,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349	104795679,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420	Gene ID= ENSG00000142208.15 TPM= 111.59 Transcript Type= protein_coding
chr14	104800913	104804712	104800913	104804712	+	ENST00000342537.7@ZBTB42	ENST00000342537.7	protein_coding	104800913	104804712	Gene ID= ENSG00000179627.9 TPM= 2.9 Transcript Type= protein_coding
chr14	104815449	104816031	104815449	104816031	-	transcript3483.chr14.nnic@NA	transcript3483.chr14.nnic	NA	104815449	104816031	Gene ID= novel_gene_chr14_3484 TPM= 12.55 Transcript Type= NA
chr14	104817816	104819901	104817816	104819901	+	transcript3485.chr14.nnic@NA	transcript3485.chr14.nnic	NA	104817816	104819901	Gene ID= novel_gene_chr14_3486 TPM= 1.93 Transcript Type= NA
chr14	104985793	104995512	104985793	104995512	+	ENST00000547315.5@C14orf79	ENST00000547315.5	protein_coding	104985793,104988943,104991491,104992948,104994598	104986854,104989088,104991620,104993064,104995512	Gene ID= ENSG00000140104.13 TPM= 3.86 Transcript Type= protein_coding
chr14	105009573	105021148	105009573	105021148	-	ENST00000336219.3@CDCA4	ENST00000336219.3	protein_coding	105020999,105009573	105021148,105011935	Gene ID= ENSG00000170779.10 TPM= 1.93 Transcript Type= protein_coding
chr14	105172939	105181303	105172939	105181303	-	ENST00000392568.6@NUDT14	ENST00000392568.6	protein_coding	105181129,105177692,105176963,105176534,105172939	105181303,105177735,105177027,105176771,105173261	Gene ID= ENSG00000183828.14 TPM= 20.27 Transcript Type= protein_coding
chr14	105219151	105301243	105219151	105301243	-	transcript3512.chr14.nic@BRF1	transcript3512.chr14.nic	protein_coding	105300446,105286296,105272721,105256518,105252507,105241265,105228820,105226634,105226251,105226069,105221648,105220069,105219151	105301243,105286376,105272894,105256549,105252579,105241414,105228913,105226760,105226290,105226161,105221914,105220130,105219232	Gene ID= ENSG00000185024.16 TPM= 4.83 Transcript Type= NA
chr14	105256186	105301278	105256186	105301278	-	ENST00000548421.2@BRF1	ENST00000548421.2	protein_coding	105300446,105286296,105272721,105256186	105301278,105286376,105272894,105256549	Gene ID= ENSG00000185024.16 TPM= 2.9 Transcript Type= protein_coding
chr14	105209286	105300688	105209286	105300688	-	ENST00000547530.6@BRF1	ENST00000547530.6	protein_coding	105300446,105286296,105272721,105256518,105252507,105241265,105228820,105226634,105226251,105226069,105221648,105220069,105219151,105218998,105217544,105212113,105211122,105209286	105300688,105286376,105272894,105256549,105252579,105241414,105228913,105226760,105226290,105226161,105221914,105220130,105219232,105219053,105217800,105212164,105211293,105210588	Gene ID= ENSG00000185024.16 TPM= 21.24 Transcript Type= protein_coding
chr14	105248529	105251093	105248529	105251093	+	transcript3518.chr14.nnic@BTBD6	transcript3518.chr14.nnic	protein_coding	105248529,105248782,105249157,105249360,105249640	105248566,105249085,105249247,105249478,105251093	Gene ID= ENSG00000184887.13 TPM= 58.31 Transcript Type= NA
chr14	105248529	105251093	105248529	105251093	+	transcript3526.chr14.nnic@BTBD6	transcript3526.chr14.nnic	protein_coding	105248529,105248782,105249157,105249640	105248566,105249085,105249478,105251093	Gene ID= ENSG00000184887.13 TPM= 20.66 Transcript Type= NA
chr14	105248574	105251093	105248574	105251093	+	ENST00000392554.7@BTBD6	ENST00000392554.7	protein_coding	105248574,105249157,105249360,105249640	105249085,105249247,105249478,105251093	Gene ID= ENSG00000184887.13 TPM= 234 Transcript Type= protein_coding
chr14	105248626	105251093	105248626	105251093	+	ENST00000463376.6@BTBD6	ENST00000463376.6	protein_coding	105248626,105249360,105249640	105249247,105249478,105251093	Gene ID= ENSG00000184887.13 TPM= 57.68 Transcript Type= protein_coding
chr14	105314415	105395206	105314415	105395206	+	ENST00000325438.12@PACS2	ENST00000325438.12	protein_coding	105314415,105348493,105352378,105355052,105367213,105368074,105368459,105369841,105376768,105379739,105380080,105380957,105381914,105382477,105382807,105383359,105384353,105384879,105389961,105391207,105391631,105392619,105393222,105394554	105315037,105348580,105352467,105355177,105367375,105368147,105368539,105369900,105376925,105379829,105380154,105381099,105382046,105382581,105382913,105383513,105384463,105384987,105390003,105391249,105391766,105392845,105393335,105395206	Gene ID= ENSG00000179364.13 TPM= 78.91 Transcript Type= protein_coding
chr14	105419822	105470729	105419822	105470729	+	ENST00000331320.11@MTA1	ENST00000331320.11	protein_coding	105419822,105438672,105445418,105449359,105450058,105450261,105454193,105458270,105460358,105460765,105463184,105463493,105464032,105464416,105464674,105465094,105466426,105466707,105469467,105469841,105470065	105420063,105438739,105445511,105449409,105450184,105450324,105454310,105458372,105460457,105460953,105463258,105463551,105464147,105464567,105464863,105465183,105466578,105466742,105469498,105469992,105470729	Gene ID= ENSG00000182979.17 TPM= 26.06 Transcript Type= protein_coding
chr14	105474150	105480170	105474150	105480170	+	ENST00000329146.8@CRIP2	ENST00000329146.8	protein_coding	105474150,105478266,105478450,105478731,105478979,105479125,105479436,105479586	105474905,105478360,105478507,105478871,105479047,105479219,105479493,105480170	Gene ID= ENSG00000182809.10 TPM= 58.88 Transcript Type= protein_coding
chr14	105474837	105480160	105474837	105480160	+	ENST00000552643.5@CRIP2	ENST00000552643.5	protein_coding	105474837,105478266,105478450,105478979,105479125,105479436,105479586	105474905,105478360,105478871,105479047,105479219,105479493,105480160	Gene ID= ENSG00000182809.10 TPM= 7.72 Transcript Type= retained_intron
chr14	105486317	105488791	105486317	105488791	+	ENST00000330233.11@CRIP1	ENST00000330233.11	protein_coding	105486317,105488166,105488331,105488471,105488663	105487299,105488260,105488388,105488516,105488791	Gene ID= ENSG00000213145.9 TPM= 6.27 Transcript Type= protein_coding
chr14	105487854	105488789	105487854	105488789	+	ENST00000461556.1@CRIP1	ENST00000461556.1	protein_coding	105487854,105488331,105488471,105488663	105488260,105488388,105488516,105488789	Gene ID= ENSG00000213145.9 TPM= 4.34 Transcript Type= retained_intron
chr14	105526603	105530202	105526603	105530202	+	ENST00000392519.6@TMEM121	ENST00000392519.6	protein_coding	105526603,105528722	105526653,105530202	Gene ID= ENSG00000184986.10 TPM= 1.93 Transcript Type= protein_coding
chr14	105586889	105588395	105586889	105588395	-	ENST00000390539.2@IGHA2	ENST00000390539.2	IG_C_gene	105588089,105587554,105586889	105588395,105587874,105587331	Gene ID= ENSG00000211890.4 TPM= 1.93 Transcript Type= IG_C_gene
chr14	105643068	105644790	105643068	105644790	-	ENST00000390545.3@IGHG2	ENST00000390545.3	IG_C_gene	105644496,105644068,105643623,105643068	105644790,105644103,105643949,105643525	Gene ID= ENSG00000211893.4 TPM= 3.86 Transcript Type= IG_C_gene
chr14	105668119	106269141	105668119	106269141	-	transcript3615.chr14.nnic@IGHG1	transcript3615.chr14.nnic	IG_C_gene	106269016,106268690,106062145,105864215,105742777,105742341,105741893,105668119	106269141,106268912,106062232,105864248,105743070,105742385,105742222,105668565	Gene ID= ENSG00000211896.7 TPM= 4.83 Transcript Type= NA
chr14	105668119	106335612	105668119	106335612	-	transcript3617.chr14.nnic@IGHG1	transcript3617.chr14.nnic	IG_C_gene	106335488,106335162,106062145,105864215,105742777,105742341,105741893,105668119	106335612,106335386,106062230,105864262,105743070,105742385,105742222,105668565	Gene ID= ENSG00000211896.7 TPM= 4.83 Transcript Type= NA
chr14	105668119	106360324	105668119	106360324	-	transcript3630.chr14.nnic@IGHG1	transcript3630.chr14.nnic	IG_C_gene	106360199,106359787,105863198,105742777,105742341,105741893,105668119	106360324,106360097,105863263,105743070,105742385,105742222,105668565	Gene ID= ENSG00000211896.7 TPM= 6.76 Transcript Type= NA
chr14	105668119	106062680	105668119	106062680	-	transcript3631.chr14.nnic@IGHG1	transcript3631.chr14.nnic	IG_C_gene	106062559,106062145,105863814,105742777,105742341,105741893,105668119	106062680,106062455,105863859,105743070,105742385,105742222,105668565	Gene ID= ENSG00000211896.7 TPM= 4.83 Transcript Type= NA
chr14	105668119	105987024	105668119	105987024	-	transcript3644.chr14.nnic@IGHG1	transcript3644.chr14.nnic	IG_C_gene	105986974,105986741,105742777,105742341,105741893,105668119	105987024,105986888,105743016,105742385,105742222,105668565	Gene ID= ENSG00000211896.7 TPM= 2.9 Transcript Type= NA
chr14	105741338	105743071	105741338	105743071	-	ENST00000390549.6@IGHG1	ENST00000390549.6	IG_C_gene	105742777,105742341,105741893,105741338	105743071,105742385,105742222,105741795	Gene ID= ENSG00000211896.7 TPM= 2.9 Transcript Type= IG_C_gene
chr14	105707118	106005584	105707118	106005584	-	transcript3648.chr14.nnic@IGHA1	transcript3648.chr14.nnic	IG_C_gene	106005487,106005091,105863814,105708359,105707785,105707118	106005584,106005401,105863862,105708664,105708144,105707562	Gene ID= ENSG00000211895.5 TPM= 1.93 Transcript Type= NA
chr14	105707118	105708665	105707118	105708665	-	ENST00000390547.3@IGHA1	ENST00000390547.3	IG_C_gene	105708359,105707785,105707118	105708665,105708144,105707562	Gene ID= ENSG00000211895.5 TPM= 17.38 Transcript Type= IG_C_gene
chr14	105838313	106335612	105838313	106335612	-	transcript3605.chr14.nnic@IGHD	transcript3605.chr14.nnic	IG_C_gene	106335488,106335162,106062145,105865407,105845375,105844825,105841961,105840901,105840367,105838313	106335612,106335386,106062230,105865443,105845677,105844926,105842032,105841224,105840690,105838429	Gene ID= ENSG00000211898.7 TPM= 1.93 Transcript Type= NA
chr15	22838648	22867716	22838648	22867716	+	transcript37.chr15.nic@NIPA2	transcript37.chr15.nic	protein_coding	22838648,22839655,22845146,22851639,22853212,22858540,22860629,22866213	22839174,22839790,22845267,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 2.9 Transcript Type= NA
chr15	22838648	22867716	22838648	22867716	+	transcript47.chr15.nic@NIPA2	transcript47.chr15.nic	protein_coding	22838648,22839655,22851639,22853212,22858540,22860629,22866213	22839174,22839790,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 4.83 Transcript Type= NA
chr15	22838674	22867716	22838674	22867716	+	transcript54.chr15.nic@NIPA2	transcript54.chr15.nic	protein_coding	22838674,22845146,22851639,22853212,22858540,22860629,22866213	22838921,22845267,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 1.93 Transcript Type= NA
chr15	22838817	22867716	22838817	22867716	+	transcript56.chr15.nnic@NIPA2	transcript56.chr15.nnic	protein_coding	22838817,22845146,22851639,22853212,22858540,22860629,22866213	22839174,22845267,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 3.86 Transcript Type= NA
chr15	22838665	22868384	22838665	22868384	+	transcript64.chr15.nnic@NIPA2	transcript64.chr15.nnic	protein_coding	22838665,22851639,22853212,22858540,22860629,22866213	22838947,22851870,22853268,22858630,22860789,22868384	Gene ID= ENSG00000140157.14 TPM= 1.93 Transcript Type= NA
chr15	22838687	22867716	22838687	22867716	+	ENST00000398013.7@NIPA2	ENST00000398013.7	protein_coding	22838687,22851639,22853212,22858540,22860629,22866213	22838921,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 16.41 Transcript Type= protein_coding
chr15	22999176	23039673	22999176	23039673	-	ENST00000615383.4@TUBGCP5	ENST00000615383.4	protein_coding	23039398,23037099,23036897,23032728,23031950,23030885,23027192,23026116,23024737,23023947,23021959,23019219,23017773,23011133,23009945,23008699,23006268,23006052,23005432,23004102,23003065,23000569,22999176	23039673,23037152,23037005,23032824,23032029,23031020,23027306,23026205,23024830,23024193,23022161,23019334,23018041,23011331,23010133,23008881,23006352,23006172,23005610,23004227,23003153,23000669,22999866	Gene ID= ENSG00000275835.4 TPM= 10.14 Transcript Type= protein_coding
chr15	23000284	23039572	23000284	23039572	-	ENST00000620435.4@TUBGCP5	ENST00000620435.4	protein_coding	23039398,23037099,23036897,23032728,23031950,23030885,23027192,23026116,23024737,23023947,23021959,23019219,23017773,23011133,23009945,23008699,23006268,23006052,23005432,23004102,23003065,23000284	23039572,23037152,23037005,23032824,23032029,23031020,23027306,23026205,23024830,23024193,23022161,23019334,23018041,23011331,23010133,23008881,23006352,23006172,23005610,23004227,23003153,23000669	Gene ID= ENSG00000275835.4 TPM= 1.45 Transcript Type= protein_coding
chr15	23303715	23314562	23303715	23314562	+	transcript82.chr15.nnic@AC242376.2	transcript82.chr15.nnic	unprocessed_pseudogene	23303715,23304428,23309140,23309607,23310152,23310803,23311360,23311605,23313105	23303818,23304530,23309457,23309735,23310297,23310974,23311512,23311729,23314562	Gene ID= ENSG00000274471.1 TPM= 2.9 Transcript Type= NA
chr15	23303715	23310759	23303715	23310759	+	transcript84.chr15.nnic@AC242376.2	transcript84.chr15.nnic	unprocessed_pseudogene	23303715,23304428,23309140,23309607	23303818,23304530,23309457,23310759	Gene ID= ENSG00000274471.1 TPM= 1.93 Transcript Type= NA
chr15	23565684	23568020	23565684	23568020	+	ENST00000314520.4@MKRN3	ENST00000314520.4	protein_coding	23565684	23568020	Gene ID= ENSG00000179455.7 TPM= 1.93 Transcript Type= protein_coding
chr15	23685678	23687305	23685678	23687305	-	transcript88.chr15.nnic@NA	transcript88.chr15.nnic	NA	23685678	23687305	Gene ID= novel_gene_chr15_89 TPM= 16.41 Transcript Type= NA
chr15	24954927	24978723	24954927	24978723	+	ENST00000390687.8@SNRPN	ENST00000390687.8	protein_coding	24954927,24962114,24967932,24974311,24975358,24976305,24976877,24977778,24978193,24978407	24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978723	Gene ID= ENSG00000128739.21 TPM= 2.9 Transcript Type= protein_coding
chr15	24954935	24978583	24954935	24978583	+	ENST00000346403.10@SNRPN	ENST00000346403.10	protein_coding	24954935,24962114,24967932,24974387,24975358,24976305,24976877,24977778,24978193,24978407	24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978583	Gene ID= ENSG00000128739.21 TPM= 3.62 Transcript Type= protein_coding
chr15	24955005	24978548	24955005	24978548	+	ENST00000577565.1@SNRPN	ENST00000577565.1	protein_coding	24955005,24962114,24967932,24974288,24975358,24976305,24976877,24977778,24978193,24978407	24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978548	Gene ID= ENSG00000128739.21 TPM= 111.98 Transcript Type= protein_coding
chr15	24955014	24968829	24955014	24968829	+	ENST00000338327.4@SNURF	ENST00000338327.4	protein_coding	24955014,24962114,24967932,24968795	24955062,24962209,24968082,24968829	Gene ID= ENSG00000273173.5 TPM= 3.86 Transcript Type= protein_coding
chr15	24996675	25002404	24996675	25002404	+	transcript111.chr15.nic@SNHG14	transcript111.chr15.nic	processed_transcript	24996675,24998970,25000245,25001358	24998486,24999078,25000374,25002404	Gene ID= ENSG00000224078.13 TPM= 2.9 Transcript Type= NA
chr15	24991479	24997288	24991479	24997288	+	transcript115.chr15.nnic@NA	transcript115.chr15.nnic	NA	24991479	24997288	Gene ID= novel_gene_chr15_116 TPM= 4.83 Transcript Type= NA
chr15	25339106	25439066	25339106	25439066	-	transcript151.chr15.nic@UBE3A	transcript151.chr15.nic	protein_coding	25438489,25411908,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25340085,25339106	25439066,25411971,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228,25339257	Gene ID= ENSG00000114062.18 TPM= 10.7 Transcript Type= NA
chr15	25337253	25439056	25337253	25439056	-	ENST00000232165.7@UBE3A	ENST00000232165.7	protein_coding	25438489,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25340085,25337253	25439056,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228,25339257	Gene ID= ENSG00000114062.18 TPM= 8.97 Transcript Type= protein_coding
chr15	25437078	25438996	25437078	25438996	-	transcript192.chr15.nnic@NA	transcript192.chr15.nnic	NA	25437078	25438996	Gene ID= novel_gene_chr15_193 TPM= 2.9 Transcript Type= NA
chr15	25438421	25441039	25438421	25441039	+	transcript196.chr15.nnic@NA	transcript196.chr15.nnic	NA	25438421	25441039	Gene ID= novel_gene_chr15_197 TPM= 1.93 Transcript Type= NA
chr15	28254488	28322196	28254488	28322196	-	transcript198.chr15.nic@HERC2	transcript198.chr15.nic	protein_coding	28322075,28321362,28299402,28292888,28280068,28274905,28274291,28272894,28272215,28270695,28269248,28268465,28265817,28265618,28262918,28260777,28257061,28256089,28255872,28254488	28322196,28321464,28299516,28293022,28280287,28275005,28274447,28273004,28272386,28270868,28269436,28268616,28265974,28265731,28263169,28260970,28257261,28256317,28255996,28254518	Gene ID= ENSG00000128731.15 TPM= 8.69 Transcript Type= NA
chr15	28255871	28322196	28255871	28322196	-	transcript202.chr15.nnic@HERC2	transcript202.chr15.nnic	protein_coding	28322075,28321362,28299402,28292888,28280068,28274905,28274291,28272894,28272215,28270695,28269248,28268465,28265817,28265618,28262918,28260777,28256089,28255871	28322196,28321464,28299516,28293022,28280287,28275005,28274447,28273004,28272386,28270868,28269436,28268616,28265974,28265731,28263169,28260970,28256317,28255996	Gene ID= ENSG00000128731.15 TPM= 1.93 Transcript Type= NA
chr15	28279813	28322196	28279813	28322196	-	transcript205.chr15.nic@HERC2	transcript205.chr15.nic	protein_coding	28322075,28321362,28299402,28292888,28279813	28322196,28321464,28299516,28293022,28280287	Gene ID= ENSG00000128731.15 TPM= 4.83 Transcript Type= NA
chr15	28111040	28322152	28111040	28322152	-	ENST00000261609.11@HERC2	ENST00000261609.11	protein_coding	28322075,28321362,28299402,28292888,28280068,28274905,28274291,28272894,28272215,28270695,28269248,28268465,28265817,28265618,28262918,28260777,28257061,28256089,28255872,28254340,28248552,28246742,28245881,28238602,28238114,28236963,28234070,28233664,28233434,28233146,28230367,28229674,28229460,28229195,28228218,28222028,28220452,28218489,28215621,28214655,28214076,28213742,28212445,28211002,28206240,28202347,28202113,28201456,28198601,28198378,28196461,28196215,28191961,28191139,28190965,28186577,28182401,28179142,28178887,28177419,28176950,28176687,28176428,28175512,28174395,28169484,28168407,28167687,28163094,28152677,28146237,28144673,28144077,28143873,28142827,28142238,28141731,28141432,28135478,28132653,28132100,28130503,28130163,28125006,28124037,28121346,28117013,28116665,28115429,28114612,28113573,28113071,28111040	28322152,28321464,28299516,28293022,28280287,28275005,28274447,28273004,28272386,28270868,28269436,28268616,28265974,28265731,28263169,28260970,28257261,28256317,28255996,28254518,28248736,28246897,28246066,28238772,28238217,28237113,28234284,28233796,28233561,28233341,28230500,28229847,28229596,28229346,28228409,28222215,28220644,28218671,28215802,28214802,28214272,28213972,28212583,28211145,28206382,28202614,28202249,28201554,28198769,28198503,28196569,28196354,28192151,28191244,28191056,28186752,28182512,28179223,28179030,28177509,28177127,28176768,28176599,28175656,28174620,28169655,28168590,28167827,28163285,28152830,28146344,28144804,28144235,28143991,28142952,28142393,28141846,28141630,28135692,28132830,28132261,28130594,28130302,28125193,28124234,28121429,28117154,28116859,28115541,28114802,28113678,28113283,28112035	Gene ID= ENSG00000128731.15 TPM= 30.89 Transcript Type= protein_coding
chr15	28737846	28758360	28737846	28758360	+	transcript214.chr15.nic@WHAMMP2	transcript214.chr15.nic	transcribed_unprocessed_pseudogene	28737846,28741110,28744749,28745980,28747710,28751488,28754469,28754809	28738185,28741266,28744899,28746149,28747875,28751674,28754555,28758360	Gene ID= ENSG00000248334.6 TPM= 1.93 Transcript Type= NA
chr15	28832380	28838983	28832380	28838983	+	ENST00000563144.1@PDCD6IPP2	ENST00000563144.1	transcribed_unprocessed_pseudogene	28832380,28833276,28838688	28832460,28833378,28838983	Gene ID= ENSG00000261377.5 TPM= 1.93 Transcript Type= processed_transcript
chr15	29268149	29269824	29268149	29269824	-	transcript219.chr15.nnic@NA	transcript219.chr15.nnic	NA	29268149	29269824	Gene ID= novel_gene_chr15_220 TPM= 17.38 Transcript Type= NA
chr15	29772074	29822486	29772074	29822486	-	transcript225.chr15.nic@TJP1	transcript225.chr15.nic	protein_coding	29822002,29800646,29773233,29772074	29822486,29800702,29773357,29772166	Gene ID= ENSG00000104067.16 TPM= 7.72 Transcript Type= NA
chr15	30427673	30470985	30427673	30470985	-	transcript227.chr15.nnic@NA	transcript227.chr15.nnic	NA	30470699,30431687,30427673	30470985,30431770,30427979	Gene ID= novel_gene_chr15_228 TPM= 4.83 Transcript Type= NA
chr15	30903864	30943108	30903864	30943108	+	transcript232.chr15.nic@FAN1	transcript232.chr15.nic	protein_coding	30903864,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789,30928553,30929203,30930543,30937119,30941566	30903887,30905897,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30925939,30928656,30929397,30930671,30937259,30943108	Gene ID= ENSG00000198690.9 TPM= 4.66 Transcript Type= NA
chr15	30903873	30943108	30903873	30943108	+	ENST00000362065.8@FAN1	ENST00000362065.8	protein_coding	30903873,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789,30928553,30929203,30930543,30937119,30941566	30904011,30905897,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30925939,30928656,30929397,30930671,30937259,30943108	Gene ID= ENSG00000198690.9 TPM= 28.07 Transcript Type= protein_coding
chr15	30903892	30943108	30903892	30943108	+	transcript237.chr15.nic@FAN1	transcript237.chr15.nic	protein_coding	30903892,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789,30928553,30929203,30930543,30937119,30941566	30904024,30904590,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30925939,30928656,30929397,30930671,30937259,30943108	Gene ID= ENSG00000198690.9 TPM= 3.21 Transcript Type= NA
chr15	30903885	30943108	30903885	30943108	+	transcript243.chr15.nnic@FAN1	transcript243.chr15.nnic	protein_coding	30903885,30904512,30908118,30913858,30918164,30920545,30922235,30925127,30925789,30928553,30929203,30930543,30937119,30941566	30904011,30905897,30908258,30914091,30918295,30920653,30922354,30925291,30925939,30928656,30929397,30930671,30937259,30943108	Gene ID= ENSG00000198690.9 TPM= 4.1 Transcript Type= NA
chr15	30903885	30928400	30903885	30928400	+	transcript249.chr15.nnic@FAN1	transcript249.chr15.nnic	protein_coding	30903885,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789,30926608	30904011,30905897,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30925939,30928400	Gene ID= ENSG00000198690.9 TPM= 2.17 Transcript Type= NA
chr15	30903885	30928405	30903885	30928405	+	transcript251.chr15.nic@FAN1	transcript251.chr15.nic	protein_coding	30903885,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789	30904011,30905897,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30928405	Gene ID= ENSG00000198690.9 TPM= 2.65 Transcript Type= NA
chr15	30903852	30911788	30903852	30911788	+	ENST00000561594.5@FAN1	ENST00000561594.5	protein_coding	30903852,30904512,30908118,30910614	30903887,30905897,30908258,30911788	Gene ID= ENSG00000198690.9 TPM= 1.45 Transcript Type= protein_coding
chr15	30903892	30911643	30903892	30911643	+	ENST00000561607.5@FAN1	ENST00000561607.5	protein_coding	30903892,30904512,30908118,30910614	30904024,30905897,30908258,30911643	Gene ID= ENSG00000198690.9 TPM= 3.38 Transcript Type= protein_coding
chr15	30938941	30991604	30938941	30991604	-	ENST00000435680.5@MTMR10	ENST00000435680.5	protein_coding	30991447,30990777,30976819,30974931,30974314,30967920,30960881,30959034,30958863,30954763,30953562,30951968,30948302,30947130,30942890,30938941	30991604,30990837,30976955,30975003,30974456,30968010,30961073,30959121,30958951,30954893,30953631,30952038,30948471,30947300,30943072,30942072	Gene ID= ENSG00000166912.16 TPM= 9.65 Transcript Type= protein_coding
chr15	31324684	31326411	31324684	31326411	-	transcript261.chr15.nnic@NA	transcript261.chr15.nnic	NA	31324684	31326411	Gene ID= novel_gene_chr15_262 TPM= 1.93 Transcript Type= NA
chr15	31387994	31435665	31387994	31435665	+	transcript268.chr15.nnic@KLF13	transcript268.chr15.nnic	protein_coding	31387994,31435370	31388181,31435665	Gene ID= ENSG00000169926.10 TPM= 1.93 Transcript Type= NA
chr15	32536727	32580625	32536727	32580625	+	transcript280.chr15.nnic@LINC02256	transcript280.chr15.nnic	lincRNA	32536727,32575571,32575917,32579708	32537006,32575668,32576000,32580625	Gene ID= ENSG00000261064.1 TPM= 3.86 Transcript Type= NA
chr15	32536720	32580625	32536720	32580625	+	transcript283.chr15.nnic@LINC02256	transcript283.chr15.nnic	lincRNA	32536720,32575917,32579708	32537006,32576000,32580625	Gene ID= ENSG00000261064.1 TPM= 4.83 Transcript Type= NA
chr15	33310962	33866101	33310962	33866101	+	ENST00000415757.7@RYR3	ENST00000415757.7	protein_coding	33310962,33473419,33503631,33530592,33533311,33539350,33540791,33543622,33548130,33550160,33562837,33566678,33579976,33581508,33584395,33585998,33601419,33603123,33613183,33623807,33628471,33629940,33631210,33632949,33634586,33635614,33636376,33644311,33646351,33647424,33649072,33652718,33659720,33660197,33662153,33663537,33669354,33670419,33696218,33697882,33699704,33700977,33706919,33722715,33724065,33726386,33728857,33731474,33736235,33738450,33739832,33742366,33746068,33748114,33748468,33749979,33750163,33755065,33756306,33757475,33768658,33769112,33771920,33773534,33780211,33785662,33788218,33800770,33801869,33810479,33810978,33812863,33813467,33816862,33818578,33819756,33820756,33821270,33821523,33822996,33825603,33826252,33826672,33827199,33830963,33834968,33836906,33837631,33840825,33841864,33843488,33844862,33848291,33853045,33853555,33854389,33854766,33857780,33859575,33860595,33861078,33864138,33865131	33311096,33473538,33503738,33530666,33533389,33539462,33540890,33543715,33548204,33550316,33563010,33566799,33580144,33581643,33584490,33586116,33601552,33603364,33613375,33624023,33628575,33630043,33631293,33633108,33634733,33635819,33636550,33644519,33646526,33647460,33649235,33652883,33659806,33660423,33662948,33663737,33669456,33670556,33696491,33697996,33699833,33701080,33707054,33722895,33724176,33726506,33729026,33731694,33736325,33738590,33739995,33742444,33746157,33748260,33748530,33750054,33750286,33755180,33756373,33757596,33768707,33769172,33772158,33773615,33780341,33785982,33788458,33800857,33801961,33810649,33811037,33812994,33813579,33816958,33818684,33819807,33820812,33821369,33821602,33823072,33825676,33826269,33826752,33827287,33831091,33835072,33836987,33838958,33840883,33842035,33843574,33845062,33848421,33853087,33853682,33854449,33854912,33857914,33859731,33860659,33861178,33864189,33866101	Gene ID= ENSG00000198838.13 TPM= 8.69 Transcript Type= protein_coding
chr15	33866227	34039176	33866227	34039176	-	ENST00000306730.7@AVEN	ENST00000306730.7	protein_coding	34038780,34003032,33875925,33870935,33867495,33866227	34039176,34003209,33875995,33871030,33867855,33866728	Gene ID= ENSG00000169857.7 TPM= 59.85 Transcript Type= protein_coding
chr15	34084017	34101948	34084017	34101948	-	ENST00000256545.8@EMC7	ENST00000256545.8	protein_coding	34101604,34095895,34090317,34088053,34084017	34101948,34096014,34090455,34088133,34084486	Gene ID= ENSG00000134153.9 TPM= 107.15 Transcript Type= protein_coding
chr15	34084017	34101862	34084017	34101862	-	transcript307.chr15.nnic@EMC7	transcript307.chr15.nnic	protein_coding	34101604,34095895,34088053,34084017	34101862,34096014,34088133,34084486	Gene ID= ENSG00000134153.9 TPM= 4.83 Transcript Type= NA
chr15	34102041	34104301	34102041	34104301	+	transcript308.chr15.nnic@NA	transcript308.chr15.nnic	NA	34102041	34104301	Gene ID= novel_gene_chr15_309 TPM= 3.86 Transcript Type= NA
chr15	34140674	34210079	34140674	34210079	-	ENST00000256544.7@KATNBL1	ENST00000256544.7	protein_coding	34209951,34163560,34154644,34152790,34148632,34147380,34147200,34146761,34145398,34140674	34210079,34163690,34154684,34153069,34148750,34147430,34147289,34146850,34145491,34142371	Gene ID= ENSG00000134152.10 TPM= 1.93 Transcript Type= protein_coding
chr15	34225013	34230147	34225013	34230147	+	ENST00000249209.8@EMC4	ENST00000249209.8	protein_coding	34225013,34225536,34227693,34229753	34225200,34225650,34227846,34230147	Gene ID= ENSG00000128463.12 TPM= 7.72 Transcript Type= protein_coding
chr15	34225037	34230156	34225037	34230156	+	ENST00000558205.5@EMC4	ENST00000558205.5	protein_coding	34225037,34225536,34227693,34228429,34229753	34225200,34225658,34227846,34228589,34230156	Gene ID= ENSG00000128463.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr15	34341713	34343177	34341713	34343177	-	ENST00000328848.5@NOP10	ENST00000328848.5	protein_coding	34343020,34341713	34343177,34342108	Gene ID= ENSG00000182117.5 TPM= 99.43 Transcript Type= protein_coding
chr15	34358618	34367278	34358618	34367278	-	ENST00000314891.10@LPCAT4	ENST00000314891.10	protein_coding	34366987,34365559,34365008,34364194,34364013,34363661,34363422,34362782,34362573,34362196,34361400,34360111,34359589,34358618	34367278,34365701,34365228,34364306,34364073,34363719,34363456,34362836,34362655,34362321,34361532,34360209,34359745,34359302	Gene ID= ENSG00000176454.13 TPM= 1.93 Transcript Type= protein_coding
chr15	34379068	34407687	34379068	34407687	-	ENST00000473125.5@GOLGA8A	ENST00000473125.5	protein_coding	34407524,34406674,34404917,34400712,34399155,34398634,34391353,34391123,34389644,34386625,34385740,34385427,34385254,34385048,34383961,34383746,34383441,34382797,34382386,34382151,34381968,34381701,34379068	34407687,34406870,34405055,34400759,34399203,34398729,34391426,34391265,34389768,34387952,34385778,34385474,34385338,34385157,34384047,34383853,34383528,34383053,34382529,34382251,34382068,34381856,34381613	Gene ID= ENSG00000175265.17 TPM= 17.38 Transcript Type= retained_intron
chr15	34790230	34795477	34790230	34795477	-	transcript344.chr15.nnic@ACTC1	transcript344.chr15.nnic	protein_coding	34795143,34794680,34793245,34792408,34792090,34791114,34790230	34795477,34794830,34793569,34792569,34792281,34791295,34790555	Gene ID= ENSG00000159251.6 TPM= 17.45 Transcript Type= NA
chr15	34788096	34796139	34788096	34796139	-	ENST00000290378.4@ACTC1	ENST00000290378.4	protein_coding	34795506,34794680,34793245,34792408,34792090,34791114,34788096	34796139,34794830,34793569,34792569,34792281,34791295,34790555	Gene ID= ENSG00000159251.6 TPM= 2.9 Transcript Type= protein_coding
chr15	34790230	34795497	34790230	34795497	-	transcript350.chr15.nic@ACTC1	transcript350.chr15.nic	protein_coding	34794680,34793245,34792408,34792090,34791114,34790230	34795497,34793569,34792569,34792281,34791295,34790555	Gene ID= ENSG00000159251.6 TPM= 22.28 Transcript Type= NA
chr15	34851782	34969839	34851782	34969839	-	ENST00000156471.9@AQR	ENST00000156471.9	protein_coding	34969539,34964234,34960774,34952885,34948264,34944288,34942012,34940899,34938737,34934571,34932318,34930258,34927035,34920332,34918258,34915038,34910135,34906545,34904336,34900622,34897559,34896897,34893663,34890215,34886526,34884525,34882502,34875935,34874677,34873828,34870752,34867524,34862867,34860042,34851782	34969839,34964290,34960814,34952920,34948384,34944428,34942080,34940999,34938813,34934635,34932434,34930371,34927138,34920434,34918378,34915179,34910313,34906712,34904505,34900863,34897705,34896966,34893773,34890324,34886661,34884734,34882639,34876006,34874864,34873999,34870922,34867609,34863041,34860155,34857106	Gene ID= ENSG00000021776.10 TPM= 1.93 Transcript Type= protein_coding
chr15	35518994	35546192	35518994	35546192	-	ENST00000440392.3@DPH6	ENST00000440392.3	protein_coding	35546119,35542413,35538274,35518994	35546192,35542507,35538467,35522278	Gene ID= ENSG00000134146.11 TPM= 4.83 Transcript Type= protein_coding
chr15	36579611	36810223	36579611	36810223	+	ENST00000566621.5@C15orf41	ENST00000566621.5	protein_coding	36579611,36644278,36645223,36654098,36657833,36691685,36692126,36697323,36709223,36709856,36808324	36579961,36644323,36645287,36654158,36657905,36691764,36692175,36697390,36709288,36709961,36810223	Gene ID= ENSG00000186073.11 TPM= 2.9 Transcript Type= protein_coding
chr15	39933986	39953939	39933986	39953939	+	transcript384.chr15.nic@EIF2AK4	transcript384.chr15.nic	protein_coding	39933986,39939505,39943383,39949116,39953904	39934339,39939617,39943485,39949268,39953939	Gene ID= ENSG00000128829.11 TPM= 13.51 Transcript Type= NA
chr15	39934153	40035590	39934153	40035590	+	ENST00000263791.9@EIF2AK4	ENST00000263791.9	protein_coding	39934153,39939505,39943383,39949116,39953904,39955620,39961784,39965686,39967344,39972908,39973592,39976414,39978078,39985805,39987983,39990273,39992175,39992769,39996964,39998731,40000988,40002713,40003193,40007016,40008027,40009614,40011281,40016502,40017108,40019093,40020899,40022519,40025977,40029406,40030359,40032169,40032757,40034326,40035027	39934339,39939617,39943485,39949268,39953984,39955768,39961899,39965843,39967879,39973014,39973749,39976844,39978147,39985888,39988105,39990377,39992229,39992848,39997065,39998784,40001224,40002788,40003314,40007065,40008195,40009730,40011346,40016672,40017242,40019200,40021027,40022605,40026089,40029464,40030456,40032237,40032801,40034444,40035590	Gene ID= ENSG00000128829.11 TPM= 11.58 Transcript Type= protein_coding
chr15	40034500	40037292	40034500	40037292	+	transcript388.chr15.nnic@NA	transcript388.chr15.nnic	NA	40034500	40037292	Gene ID= novel_gene_chr15_389 TPM= 4.83 Transcript Type= NA
chr15	40035739	40039188	40035739	40039188	-	ENST00000267884.10@SRP14	ENST00000267884.10	protein_coding	40039093,40038876,40038282,40036986,40035739	40039188,40038948,40038394,40037018,40036500	Gene ID= ENSG00000140319.10 TPM= 21.24 Transcript Type= protein_coding
chr15	40036041	40039164	40036041	40039164	-	ENST00000558527.5@SRP14	ENST00000558527.5	protein_coding	40039093,40038876,40038282,40037309,40036986,40036041	40039164,40038948,40038394,40037348,40037018,40036500	Gene ID= ENSG00000140319.10 TPM= 3.86 Transcript Type= processed_transcript
chr15	40039296	40065705	40039296	40065705	+	transcript391.chr15.nnic@SRP14-AS1	transcript391.chr15.nnic	lincRNA	40039296,40045961,40064463,40065221	40039448,40046069,40064601,40065705	Gene ID= ENSG00000248508.6 TPM= 1.93 Transcript Type= NA
chr15	40239870	40277487	40239870	40277487	+	ENST00000260404.8@PAK6	ENST00000260404.8	protein_coding	40239870,40240599,40253178,40264781,40265842,40272224,40272866,40273346,40273551,40274142,40275927	40240095,40240681,40253289,40264989,40266495,40272721,40272999,40273472,40273676,40274276,40277487	Gene ID= ENSG00000137843.11 TPM= 1.93 Transcript Type= protein_coding
chr15	40323664	40326715	40323664	40326715	+	ENST00000638170.1@INAFM2	ENST00000638170.1	protein_coding	40323664	40326715	Gene ID= ENSG00000259330.2 TPM= 92.67 Transcript Type= protein_coding
chr15	40331452	40340304	40331452	40340304	-	transcript398.chr15.nnic@C15orf52	transcript398.chr15.nnic	protein_coding	40340247,40339905,40339512,40338748,40338535,40337724,40337388,40336760,40336574,40335784,40331452	40340304,40340015,40339619,40338903,40338660,40337893,40337446,40336813,40336664,40335826,40335700	Gene ID= ENSG00000188549.12 TPM= 40.54 Transcript Type= NA
chr15	40331452	40340306	40331452	40340306	-	transcript404.chr15.nic@C15orf52	transcript404.chr15.nic	protein_coding	40339905,40339512,40338748,40338535,40337724,40337388,40336760,40336574,40335784,40331452	40340306,40339619,40338903,40338660,40337893,40337446,40336813,40336664,40335826,40335700	Gene ID= ENSG00000188549.12 TPM= 44.4 Transcript Type= NA
chr15	40358235	40378639	40358235	40378639	+	ENST00000267889.4@DISP2	ENST00000267889.4	protein_coding	40358235,40363625,40364226,40364421,40364838,40365147,40365628,40367058	40358440,40363954,40364255,40364544,40364953,40365274,40365725,40378639	Gene ID= ENSG00000140323.5 TPM= 1.93 Transcript Type= protein_coding
chr15	40382979	40394160	40382979	40394160	+	ENST00000561169.5@KNSTRN	ENST00000561169.5	protein_coding	40382979,40383228,40386362,40387159,40389489,40389836,40391493,40391949,40393469	40383044,40383322,40386494,40387206,40389611,40389929,40391554,40392023,40394160	Gene ID= ENSG00000128944.13 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr15	40382941	40394246	40382941	40394246	+	ENST00000608100.5@KNSTRN	ENST00000608100.5	protein_coding	40382941,40383228,40386362,40387159,40389506,40389836,40391493,40391949,40393469	40383044,40383322,40386494,40387206,40389611,40389929,40391554,40392023,40394246	Gene ID= ENSG00000128944.13 TPM= 6.76 Transcript Type= protein_coding
chr15	40405808	40418857	40405808	40418857	+	transcript420.chr15.nnic@IVD	transcript420.chr15.nnic	protein_coding	40405808,40407636,40407939,40410628,40411260,40411555,40412991,40414823,40415401,40416078,40416290,40418130	40405971,40407725,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40418857	Gene ID= ENSG00000128928.8 TPM= 3.62 Transcript Type= NA
chr15	40405795	40421299	40405795	40421299	+	ENST00000479013.6@IVD	ENST00000479013.6	protein_coding	40405795,40407939,40410628,40411260,40411555,40412991,40414889,40415401,40416078,40416290,40418130	40405971,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40421299	Gene ID= ENSG00000128928.8 TPM= 6.76 Transcript Type= protein_coding
chr15	40405795	40418767	40405795	40418767	+	ENST00000487418.6@IVD	ENST00000487418.6	protein_coding	40405795,40407636,40407939,40410628,40411260,40411555,40412991,40414889,40415401,40416078,40416290,40418130	40405971,40407725,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40418767	Gene ID= ENSG00000128928.8 TPM= 2.9 Transcript Type= protein_coding
chr15	40441212	40468242	40441212	40468242	+	ENST00000416165.5@BAHD1	ENST00000416165.5	protein_coding	40441212,40458451,40461912,40463861,40464471,40465335,40465941	40441268,40459896,40462294,40464020,40464547,40465435,40468242	Gene ID= ENSG00000140320.11 TPM= 11.58 Transcript Type= protein_coding
chr15	40458465	40468228	40458465	40468228	+	ENST00000560846.1@BAHD1	ENST00000560846.1	protein_coding	40458465,40461912,40463861,40464471,40465344,40465941	40459896,40462294,40464020,40464547,40465435,40468228	Gene ID= ENSG00000140320.11 TPM= 10.62 Transcript Type= protein_coding
chr15	40553099	40565052	40553099	40565052	-	ENST00000358005.7@CCDC32	ENST00000358005.7	protein_coding	40564791,40562772,40557216,40553099	40565052,40563027,40557372,40554127	Gene ID= ENSG00000128891.15 TPM= 2.9 Transcript Type= protein_coding
chr15	40553104	40565057	40553104	40565057	-	ENST00000416810.6@CCDC32	ENST00000416810.6	protein_coding	40564976,40562772,40557216,40553104	40565057,40563027,40557372,40554127	Gene ID= ENSG00000128891.15 TPM= 14.48 Transcript Type= protein_coding
chr15	40569437	40570067	40569437	40570067	+	ENST00000616318.1@RPUSD2	ENST00000616318.1	protein_coding	40569437	40570067	Gene ID= ENSG00000166133.17 TPM= 1.93 Transcript Type= protein_coding
chr15	40569300	40574943	40569300	40574943	+	ENST00000315616.11@RPUSD2	ENST00000315616.11	protein_coding	40569300,40571604,40573527	40569943,40571900,40574943	Gene ID= ENSG00000166133.17 TPM= 2.9 Transcript Type= protein_coding
chr15	40688760	40691390	40688760	40691390	+	transcript449.chr15.nnic@NA	transcript449.chr15.nnic	NA	40688760	40691390	Gene ID= novel_gene_chr15_450 TPM= 1.93 Transcript Type= NA
chr15	40693741	40695107	40693741	40695107	-	ENST00000499988.2@RAD51-AS1	ENST00000499988.2	processed_transcript	40695012,40693741	40695107,40694795	Gene ID= ENSG00000245849.6 TPM= 4.83 Transcript Type= retained_intron
chr15	40735888	40755269	40735888	40755269	-	transcript458.chr15.nic@RMDN3	transcript458.chr15.nic	protein_coding	40755199,40754597,40751986,40751426,40744977,40744047,40740133,40738501,40737965,40737628,40737288,40737124,40735888	40755269,40754790,40752178,40751569,40745259,40744149,40740193,40738576,40738042,40737726,40737341,40737204,40736594	Gene ID= ENSG00000137824.15 TPM= 17.38 Transcript Type= NA
chr15	40735888	40755260	40735888	40755260	-	ENST00000338376.7@RMDN3	ENST00000338376.7	protein_coding	40755083,40754597,40751986,40751426,40744977,40744047,40740133,40738501,40737965,40737628,40737288,40737124,40735888	40755260,40754790,40752178,40751569,40745259,40744149,40740193,40738576,40738042,40737726,40737341,40737204,40736594	Gene ID= ENSG00000137824.15 TPM= 29.92 Transcript Type= protein_coding
chr15	40764020	40767710	40764020	40767710	+	ENST00000260447.5@GCHFR	ENST00000260447.5	protein_coding	40764020,40765827,40767226	40764216,40765921,40767710	Gene ID= ENSG00000137880.5 TPM= 6.76 Transcript Type= protein_coding
chr15	40767873	40807480	40767873	40807480	-	transcript470.chr15.nic@DNAJC17	transcript470.chr15.nic	protein_coding	40807369,40779928,40779545,40779223,40776542,40776196,40775553,40774968,40774356,40773727,40767873	40807480,40779997,40779603,40779310,40776627,40776292,40775596,40775108,40774436,40773837,40768062	Gene ID= ENSG00000104129.9 TPM= 1.93 Transcript Type= NA
chr15	40765155	40807477	40765155	40807477	-	ENST00000220496.8@DNAJC17	ENST00000220496.8	protein_coding	40807369,40779928,40779545,40779223,40776542,40776196,40775553,40775031,40774356,40773727,40765155	40807477,40779997,40779603,40779310,40776627,40776292,40775596,40775108,40774436,40773837,40768062	Gene ID= ENSG00000104129.9 TPM= 7.72 Transcript Type= protein_coding
chr15	40807628	40814569	40807628	40814569	+	transcript472.chr15.nic@ZFYVE19	transcript472.chr15.nic	protein_coding	40807628,40809119,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943	40807868,40809240,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814569	Gene ID= ENSG00000166140.17 TPM= 1.93 Transcript Type= NA
chr15	40807089	40814569	40807089	40814569	+	transcript474.chr15.nic@ZFYVE19	transcript474.chr15.nic	protein_coding	40807089,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943,40814148	40807868,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814070,40814569	Gene ID= ENSG00000166140.17 TPM= 1.93 Transcript Type= NA
chr15	40807695	40814569	40807695	40814569	+	transcript475.chr15.nic@ZFYVE19	transcript475.chr15.nic	protein_coding	40807695,40809408,40809852,40810071,40810649,40813338,40813713,40813943,40814148	40809240,40809458,40809970,40810216,40810757,40813417,40813811,40814070,40814569	Gene ID= ENSG00000166140.17 TPM= 3.86 Transcript Type= NA
chr15	40894430	40903975	40894430	40903975	+	ENST00000220509.9@VPS18	ENST00000220509.9	protein_coding	40894430,40895938,40898907,40899144,40902616	40894859,40896079,40898998,40901014,40903975	Gene ID= ENSG00000104142.10 TPM= 54.06 Transcript Type= protein_coding
chr15	40953493	40956512	40953493	40956512	+	ENST00000617961.1@CHAC1	ENST00000617961.1	protein_coding	40953493,40954228,40955373	40953814,40954263,40956512	Gene ID= ENSG00000128965.11 TPM= 203.68 Transcript Type= protein_coding
chr15	40953473	40956511	40953473	40956511	+	transcript497.chr15.nnic@NA	transcript497.chr15.nnic	NA	40953473	40956511	Gene ID= novel_gene_chr15_498 TPM= 13.51 Transcript Type= NA
chr15	40985349	41116427	40985349	41116427	-	transcript485.chr15.nic@INO80	transcript485.chr15.nic	protein_coding	41115973,41096168,41095759,41095601,41092027,41087562,41085369,41081020,41079701,41074370,41073428,41071849,41070467,41069570,41059867,41058639,41056622,41055247,41053929,41049935,41049287,41048212,41047408,41044904,41027596,41020900,41016088,41005593,40997529,40987816,40987091,40985349	41116427,41096353,41095928,41095668,41092182,41087682,41085583,41081073,41079904,41074565,41073495,41072058,41070547,41069665,41059926,41058781,41056706,41055364,41054014,41050102,41049420,41048276,41047501,41045075,41027736,41021125,41016215,41005687,40997601,40987974,40987193,40985426	Gene ID= ENSG00000128908.15 TPM= 4.83 Transcript Type= NA
chr15	41064043	41116427	41064043	41116427	-	transcript487.chr15.nnic@INO80	transcript487.chr15.nnic	protein_coding	41115973,41096168,41095759,41095601,41092027,41087562,41085369,41081020,41079701,41074370,41073428,41071849,41070467,41069570,41064043	41116427,41096353,41095928,41095668,41092182,41087682,41085583,41081073,41079904,41074565,41073495,41072058,41070547,41069665,41064991	Gene ID= ENSG00000128908.15 TPM= 2.41 Transcript Type= NA
chr15	40978893	41116153	40978893	41116153	-	ENST00000401393.7@INO80	ENST00000401393.7	protein_coding	41115973,41096168,41095759,41095601,41092027,41087562,41085369,41081020,41079701,41074370,41073428,41071849,41070467,41069570,41059867,41058639,41056622,41055247,41053929,41049935,41049287,41048212,41047408,41044904,41027596,41020900,41016088,41005593,40997529,40987816,40987091,40985338,40984197,40983762,40982862,40979492,40978893	41116153,41096353,41095928,41095668,41092182,41087682,41085583,41081073,41079904,41074565,41073495,41072058,41070547,41069665,41059926,41058781,41056706,41055364,41054014,41050102,41049420,41048276,41047501,41045075,41027736,41021125,41016215,41005687,40997601,40987974,40987193,40985426,40984352,40983921,40983077,40980440,40979257	Gene ID= ENSG00000128908.15 TPM= 10.14 Transcript Type= protein_coding
chr15	41231143	41281890	41231143	41281890	+	ENST00000334660.9@CHP1	ENST00000334660.9	protein_coding	41231143,41243667,41256910,41262756,41270557,41278767,41279336	41231449,41243739,41256990,41262883,41270618,41278889,41281890	Gene ID= ENSG00000187446.11 TPM= 118.73 Transcript Type= protein_coding
chr15	41283965	41299089	41283965	41299089	+	transcript510.chr15.nnic@OIP5-AS1	transcript510.chr15.nnic	processed_transcript	41283965,41285225,41286011,41297837,41298041	41284110,41285363,41286100,41297929,41299089	Gene ID= ENSG00000247556.6 TPM= 3.86 Transcript Type= NA
chr15	41283965	41301999	41283965	41301999	+	transcript514.chr15.nnic@OIP5-AS1	transcript514.chr15.nnic	processed_transcript	41283965,41285225,41286011,41298041,41299239	41284110,41285363,41286100,41298781,41301999	Gene ID= ENSG00000247556.6 TPM= 18.34 Transcript Type= NA
chr15	41284032	41309737	41284032	41309737	+	ENST00000501665.2@OIP5-AS1	ENST00000501665.2	processed_transcript	41284032,41285225,41286011,41308567,41308720	41284110,41285363,41286100,41308624,41309737	Gene ID= ENSG00000247556.6 TPM= 2.9 Transcript Type= antisense_RNA
chr15	41309268	41332621	41309268	41332621	-	ENST00000220514.7@OIP5	ENST00000220514.7	protein_coding	41332240,41331915,41319658,41313273,41309268	41332621,41331981,41319780,41313354,41309849	Gene ID= ENSG00000104147.8 TPM= 4.83 Transcript Type= protein_coding
chr15	41320803	41322388	41320803	41322388	+	transcript521.chr15.nnic@NA	transcript521.chr15.nnic	NA	41320803	41322388	Gene ID= novel_gene_chr15_522 TPM= 1.93 Transcript Type= NA
chr15	41387349	41402539	41387349	41402539	-	transcript525.chr15.nnic@NDUFAF1	transcript525.chr15.nnic	protein_coding	41402447,41396487,41394859,41394265,41388448,41387349	41402539,41397140,41395044,41394358,41388522,41387593	Gene ID= ENSG00000137806.8 TPM= 1.93 Transcript Type= NA
chr15	41387349	41402460	41387349	41402460	-	transcript527.chr15.nic@NDUFAF1	transcript527.chr15.nic	protein_coding	41402260,41396487,41394859,41388448,41387349	41402460,41397140,41395044,41388522,41387593	Gene ID= ENSG00000137806.8 TPM= 2.9 Transcript Type= NA
chr15	41387349	41402539	41387349	41402539	-	transcript528.chr15.nic@NDUFAF1	transcript528.chr15.nic	protein_coding	41402447,41396487,41394859,41388448,41387349	41402539,41397140,41395044,41388522,41387593	Gene ID= ENSG00000137806.8 TPM= 20.27 Transcript Type= NA
chr15	41387349	41402444	41387349	41402444	-	ENST00000260361.8@NDUFAF1	ENST00000260361.8	protein_coding	41402144,41396487,41394859,41388448,41387349	41402444,41397140,41395044,41388522,41387593	Gene ID= ENSG00000137806.8 TPM= 11.58 Transcript Type= protein_coding
chr15	41417104	41483563	41417104	41483563	+	ENST00000389629.8@RTF1	ENST00000389629.8	protein_coding	41417104,41438321,41452901,41457672,41464771,41466141,41470257,41471172,41474620,41475525,41475712,41476446,41477165,41477458,41478548,41479103,41480214,41480581	41417313,41438431,41453048,41457876,41464885,41466252,41470392,41471349,41474702,41475612,41475819,41476523,41477286,41477515,41478625,41479198,41480325,41483563	Gene ID= ENSG00000137815.14 TPM= 5.79 Transcript Type= protein_coding
chr15	41493311	41503549	41493311	41503549	+	transcript548.chr15.nic@ITPKA	transcript548.chr15.nic	protein_coding	41493311,41501463,41501635,41501997,41502402,41502788	41494416,41501559,41501851,41502201,41502503,41503549	Gene ID= ENSG00000137825.10 TPM= 1.93 Transcript Type= NA
chr15	41517176	41544259	41517176	41544259	-	ENST00000304330.8@RPAP1	ENST00000304330.8	protein_coding	41544219,41536945,41536501,41536129,41535512,41534714,41531023,41529864,41529470,41528235,41527860,41527423,41527167,41526898,41524991,41524096,41523771,41523245,41522765,41522098,41521738,41520391,41518006,41517798,41517176	41544259,41537201,41536649,41536218,41535632,41534935,41531202,41529979,41529568,41528336,41528027,41527605,41527301,41527068,41525148,41524254,41523972,41523354,41522960,41522250,41521880,41521147,41518182,41517857,41517691	Gene ID= ENSG00000103932.11 TPM= 55.99 Transcript Type= protein_coding
chr15	41828085	41837581	41828085	41837581	+	ENST00000397299.8@JMJD7	ENST00000397299.8	protein_coding	41828085,41834740,41834970,41835588,41836148,41836475,41836781,41837068	41828188,41834893,41835223,41835644,41836243,41836551,41836940,41837581	Gene ID= ENSG00000243789.10 TPM= 10.62 Transcript Type= protein_coding
chr15	41895939	41972578	41895939	41972578	-	ENST00000220325.8@EHD4	ENST00000220325.8	protein_coding	41972259,41953764,41943067,41919210,41909699,41895939	41972578,41953940,41943164,41919622,41909863,41901181	Gene ID= ENSG00000103966.10 TPM= 4.83 Transcript Type= protein_coding
chr15	42141204	42156611	42141204	42156611	-	ENST00000290497.11@PLA2G4F	ENST00000290497.11	protein_coding	42156439,42154322,42154092,42153620,42153300,42152688,42150608,42150373,42150104,42149713,42147626,42147124,42146127,42145766,42145575,42144450,42143978,42142528,42141204	42156611,42154458,42154220,42153660,42153342,42152754,42150777,42150486,42150141,42149848,42147762,42147346,42146241,42145903,42145682,42144644,42144144,42142714,42142204	Gene ID= ENSG00000168907.13 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr15	42158701	42208316	42158701	42208316	-	ENST00000318006.9@VPS39	ENST00000318006.9	protein_coding	42208081,42199896,42191496,42191125,42189114,42187758,42187271,42184517,42178450,42178218,42173723,42169724,42167394,42166772,42166563,42166159,42165718,42164996,42164358,42163626,42163350,42162332,42162032,42161682,42158701	42208316,42199961,42191560,42191167,42189208,42187856,42187363,42184700,42178570,42178338,42173852,42169866,42167537,42166913,42166649,42166232,42165816,42165113,42164486,42163728,42163395,42162481,42162166,42161773,42160829	Gene ID= ENSG00000166887.15 TPM= 40.54 Transcript Type= protein_coding
chr15	42210532	42273663	42210532	42273663	-	ENST00000389834.8@TMEM87A	ENST00000389834.8	protein_coding	42273255,42272063,42267947,42264090,42261196,42260958,42244050,42239670,42237432,42236320,42233213,42231192,42228712,42227711,42226806,42220062,42219581,42218323,42217803,42210532	42273663,42272123,42268032,42264203,42261249,42261002,42244167,42239731,42237615,42236419,42233306,42231260,42228820,42227769,42226909,42220135,42219642,42218378,42217833,42211749	Gene ID= ENSG00000103978.15 TPM= 11.1 Transcript Type= protein_coding
chr15	42210532	42273435	42210532	42273435	-	transcript592.chr15.nic@TMEM87A	transcript592.chr15.nic	protein_coding	42273255,42272063,42267947,42264090,42261196,42260958,42244050,42239670,42237432,42236320,42233213,42231844,42228712,42227711,42226806,42220062,42219581,42218323,42217803,42210532	42273435,42272123,42268032,42264203,42261249,42261002,42244167,42239731,42237615,42236419,42233306,42231915,42228820,42227769,42226909,42220135,42219642,42218378,42217833,42211749	Gene ID= ENSG00000103978.15 TPM= 3.38 Transcript Type= NA
chr15	42359462	42412317	42359462	42412317	+	transcript608.chr15.nic@CAPN3	transcript608.chr15.nic	protein_coding	42359462,42384483,42386167,42387753,42388928,42389953,42392639,42394256,42396800,42399492,42401641,42402124,42402794,42403741,42405926,42408211,42409303,42409787,42409931,42410428,42410588,42410884,42411287,42412086	42360114,42384552,42386285,42387886,42389096,42390096,42392722,42394341,42396877,42399652,42401810,42402135,42403002,42403777,42405943,42408324,42409380,42409844,42409995,42410496,42410666,42411000,42411345,42412317	Gene ID= ENSG00000092529.23 TPM= 40.54 Transcript Type= NA
chr15	42359498	42403775	42359498	42403775	+	transcript618.chr15.nnic@CAPN3	transcript618.chr15.nnic	protein_coding	42359498,42384483,42386167,42387753,42388928,42389953,42392639,42394256,42396800,42399492,42401641,42402794,42403741	42360114,42384552,42386285,42387886,42389096,42390096,42392722,42394341,42396877,42399652,42401812,42403002,42403775	Gene ID= ENSG00000092529.23 TPM= 85.91 Transcript Type= NA
chr15	42359587	42412316	42359587	42412316	+	ENST00000397163.7@CAPN3	ENST00000397163.7	protein_coding	42359587,42384483,42386167,42387753,42388928,42389953,42392639,42394256,42396800,42399492,42401641,42402124,42402794,42403741,42405926,42408211,42409303,42409787,42409931,42410428,42410588,42410884,42411287,42411747	42360114,42384552,42386285,42387886,42389096,42390096,42392722,42394341,42396877,42399652,42401810,42402135,42403002,42403777,42405943,42408324,42409380,42409844,42409995,42410496,42410666,42411000,42411345,42412316	Gene ID= ENSG00000092529.23 TPM= 224.92 Transcript Type= protein_coding
chr15	42416789	42441193	42416789	42441193	-	transcript634.chr15.nic@ZNF106	transcript634.chr15.nic	protein_coding	42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42416789	42441193,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360	Gene ID= ENSG00000103994.16 TPM= 7.24 Transcript Type= NA
chr15	42439453	42491140	42439453	42491140	-	transcript635.chr15.nic@ZNF106	transcript635.chr15.nic	protein_coding	42490980,42472236,42466053,42456958,42449771,42448072,42446589,42444827,42444202,42442073,42439453	42491140,42472321,42466114,42457158,42451954,42448705,42446658,42444981,42444262,42442414,42439813	Gene ID= ENSG00000103994.16 TPM= 13.66 Transcript Type= NA
chr15	42446626	42491140	42446626	42491140	-	transcript650.chr15.nic@ZNF106	transcript650.chr15.nic	protein_coding	42490980,42472236,42466053,42448072,42446626	42491140,42472321,42466114,42448705,42446658	Gene ID= ENSG00000103994.16 TPM= 10.62 Transcript Type= NA
chr15	42446626	42457566	42446626	42457566	-	transcript656.chr15.nic@ZNF106	transcript656.chr15.nic	protein_coding	42456958,42449771,42448072,42446626	42457566,42451954,42448705,42446658	Gene ID= ENSG00000103994.16 TPM= 79.64 Transcript Type= NA
chr15	42446626	42457541	42446626	42457541	-	transcript662.chr15.nic@ZNF106	transcript662.chr15.nic	protein_coding	42457217,42448072,42446626	42457541,42448705,42446658	Gene ID= ENSG00000103994.16 TPM= 10.62 Transcript Type= NA
chr15	42450986	42457532	42450986	42457532	-	transcript665.chr15.nnic@ZNF106	transcript665.chr15.nnic	protein_coding	42456958,42454774,42450986	42457532,42454891,42451954	Gene ID= ENSG00000103994.16 TPM= 2.9 Transcript Type= NA
chr15	42449660	42457566	42449660	42457566	-	transcript666.chr15.nic@ZNF106	transcript666.chr15.nic	protein_coding	42456958,42449660	42457566,42451954	Gene ID= ENSG00000103994.16 TPM= 14.48 Transcript Type= NA
chr15	42412823	42457532	42412823	42457532	-	ENST00000263805.8@ZNF106	ENST00000263805.8	protein_coding	42456958,42449771,42448072,42446589,42444827,42444202,42442073,42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42412823	42457532,42451954,42448705,42446658,42444981,42444262,42442414,42439813,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360	Gene ID= ENSG00000103994.16 TPM= 164.89 Transcript Type= protein_coding
chr15	42415121	42491105	42415121	42491105	-	ENST00000565380.5@ZNF106	ENST00000565380.5	protein_coding	42490980,42472236,42466053,42448072,42446589,42444827,42444202,42442073,42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42415121	42491105,42472321,42466114,42448705,42446658,42444981,42444262,42442414,42439813,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360	Gene ID= ENSG00000103994.16 TPM= 67.4 Transcript Type= protein_coding
chr15	42415740	42457513	42415740	42457513	-	ENST00000565611.5@ZNF106	ENST00000565611.5	protein_coding	42457217,42448072,42446589,42444827,42444202,42442073,42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42415740	42457513,42448705,42446658,42444981,42444262,42442414,42439813,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360	Gene ID= ENSG00000103994.16 TPM= 49.06 Transcript Type= protein_coding
chr15	42446626	42457556	42446626	42457556	-	ENST00000565948.1@ZNF106	ENST00000565948.1	protein_coding	42457217,42449771,42448072,42446626	42457556,42451954,42448705,42446658	Gene ID= ENSG00000103994.16 TPM= 24.13 Transcript Type= protein_coding
chr15	42450978	42491123	42450978	42491123	-	ENST00000564754.5@ZNF106	ENST00000564754.5	protein_coding	42490980,42472236,42466053,42456958,42450978	42491123,42472321,42466114,42457158,42451954	Gene ID= ENSG00000103994.16 TPM= 20.27 Transcript Type= protein_coding
chr15	42495581	42533059	42495581	42533059	+	transcript674.chr15.nnic@SNAP23	transcript674.chr15.nnic	protein_coding	42495581,42511833,42512955,42513399,42515237,42521448,42528262,42529675,42531413	42495713,42511903,42512996,42513447,42515354,42521480,42528420,42529819,42533059	Gene ID= ENSG00000092531.9 TPM= 28.31 Transcript Type= NA
chr15	42495640	42533059	42495640	42533059	+	transcript676.chr15.nnic@SNAP23	transcript676.chr15.nnic	protein_coding	42495640,42511833,42512955,42513399,42515237,42521448,42528262,42529675,42531413	42495713,42511903,42512996,42513447,42515354,42522014,42528420,42529819,42533059	Gene ID= ENSG00000092531.9 TPM= 6.11 Transcript Type= NA
chr15	42495260	42533061	42495260	42533061	+	ENST00000249647.7@SNAP23	ENST00000249647.7	protein_coding	42495260,42511833,42512955,42513399,42515237,42528262,42529675,42531413	42495713,42511903,42512996,42513447,42515354,42528420,42529819,42533061	Gene ID= ENSG00000092531.9 TPM= 14.8 Transcript Type= protein_coding
chr15	42542522	42548773	42542522	42548773	-	ENST00000397130.7@LRRC57	ENST00000397130.7	protein_coding	42548693,42548351,42548106,42547261,42545077,42542522	42548773,42548456,42548244,42547529,42545262,42544124	Gene ID= ENSG00000180979.9 TPM= 6.76 Transcript Type= protein_coding
chr15	42548810	42569994	42548810	42569994	+	ENST00000260372.7@HAUS2	ENST00000260372.7	protein_coding	42548810,42558198,42559339,42561270,42563749,42566607	42548965,42558290,42559408,42561402,42563857,42569994	Gene ID= ENSG00000137814.10 TPM= 9.65 Transcript Type= protein_coding
chr15	42548829	42569994	42548829	42569994	+	transcript696.chr15.nnic@HAUS2	transcript696.chr15.nnic	protein_coding	42548829,42561270,42563749,42566607	42548965,42561402,42563857,42569994	Gene ID= ENSG00000137814.10 TPM= 3.86 Transcript Type= NA
chr15	42723562	42737126	42723562	42737126	-	ENST00000356231.3@CDAN1	ENST00000356231.3	protein_coding	42737013,42736302,42735875,42735510,42735261,42735100,42734226,42733938,42733097,42732333,42731620,42731211,42730925,42730598,42730128,42729796,42729568,42729229,42729023,42728652,42728204,42727955,42727621,42726310,42726097,42725489,42725144,42723562	42737126,42736780,42736078,42735679,42735374,42735178,42734346,42734047,42733186,42732408,42731825,42731331,42731071,42730764,42730215,42729885,42729622,42729362,42729126,42728810,42728267,42728033,42727769,42726417,42726160,42725670,42725251,42724616	Gene ID= ENSG00000140326.12 TPM= 5.79 Transcript Type= protein_coding
chr15	43017095	43106458	43017095	43106458	-	transcript708.chr15.nic@UBR1	transcript708.chr15.nic	protein_coding	43105942,43085984,43082638,43074979,43070795,43067898,43060052,43059702,43059085,43058341,43056344,43054742,43048392,43047161,43043215,43038171,43037773,43036528,43036178,43032568,43029944,43027776,43026561,43025381,43024829,43022702,43021275,43017095	43106458,43086240,43082716,43075089,43070925,43068036,43060114,43059825,43059192,43058429,43056442,43054899,43048491,43047289,43043395,43038232,43037883,43036593,43036279,43032631,43030068,43027828,43026663,43025429,43024983,43022801,43021375,43017181	Gene ID= ENSG00000159459.11 TPM= 3.86 Transcript Type= NA
chr15	43133524	43185146	43133524	43185146	+	ENST00000260403.6@TMEM62	ENST00000260403.6	protein_coding	43133524,43134257,43135512,43138574,43146493,43148755,43149029,43151790,43154672,43160681,43169593,43178607,43181181,43184260	43133982,43134368,43135649,43138619,43146634,43148879,43149151,43151945,43154831,43160794,43169677,43178711,43181299,43185146	Gene ID= ENSG00000137842.6 TPM= 7.24 Transcript Type= protein_coding
chr15	43133553	43185146	43133553	43185146	+	transcript713.chr15.nic@TMEM62	transcript713.chr15.nic	protein_coding	43133553,43134257,43135512,43138574,43146493,43148755,43149029,43151790,43154672,43160681,43169593,43181181,43184260	43133982,43134368,43135649,43138619,43146634,43148879,43149151,43151945,43154831,43160794,43169677,43181299,43185146	Gene ID= ENSG00000137842.6 TPM= 6.27 Transcript Type= NA
chr15	43133553	43165155	43133553	43165155	+	transcript715.chr15.nnic@TMEM62	transcript715.chr15.nnic	protein_coding	43133553,43134257,43135512,43138574,43146493,43148755,43149029,43151790,43154672,43160681,43164545	43133982,43134368,43135649,43138619,43146634,43148879,43149151,43151945,43154831,43160794,43165155	Gene ID= ENSG00000137842.6 TPM= 1.93 Transcript Type= NA
chr15	43185257	43197176	43185257	43197176	+	ENST00000300213.8@CCNDBP1	ENST00000300213.8	protein_coding	43185257,43185820,43186154,43189199,43190055,43190325,43190966,43191395,43192743,43194415,43194727	43185607,43185879,43186233,43189280,43190151,43190398,43191042,43191675,43192803,43194461,43197176	Gene ID= ENSG00000166946.13 TPM= 76.26 Transcript Type= protein_coding
chr15	43185407	43195192	43185407	43195192	+	transcript724.chr15.nic@CCNDBP1	transcript724.chr15.nic	protein_coding	43185407,43189199,43190325,43190966,43191395,43192743,43194415,43194727	43185607,43189280,43190398,43191042,43191675,43192803,43194461,43195192	Gene ID= ENSG00000166946.13 TPM= 2.9 Transcript Type= NA
chr15	43185405	43195160	43185405	43195160	+	ENST00000569745.5@CCNDBP1	ENST00000569745.5	protein_coding	43185405,43189199,43190055,43190325,43190966,43191395,43192743,43194415,43194727	43185607,43189280,43190151,43190398,43191042,43191675,43192803,43194461,43195160	Gene ID= ENSG00000166946.13 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr15	43276280	43280906	43276280	43280906	-	transcript726.chr15.nic@TGM7	transcript726.chr15.nic	protein_coding	43279625,43279117,43276862,43276280	43280906,43279277,43276995,43276614	Gene ID= ENSG00000159495.7 TPM= 3.86 Transcript Type= NA
chr15	43276280	43280908	43276280	43280908	-	transcript729.chr15.nnic@TGM7	transcript729.chr15.nnic	protein_coding	43279625,43276862,43276280	43280908,43276995,43276614	Gene ID= ENSG00000159495.7 TPM= 15.44 Transcript Type= NA
chr15	43327776	43330616	43327776	43330616	-	transcript740.chr15.nnic@NA	transcript740.chr15.nnic	NA	43327776	43330616	Gene ID= novel_gene_chr15_741 TPM= 9.65 Transcript Type= NA
chr15	43403061	43493171	43403061	43493171	-	ENST00000382044.8@TP53BP1	ENST00000382044.8	protein_coding	43493037,43492284,43492002,43491669,43480895,43479859,43479397,43477593,43475565,43474673,43469858,43455892,43447366,43446387,43441526,43438324,43432194,43428016,43421855,43421025,43420305,43416225,43415594,43413119,43409647,43408897,43407943,43403061	43493171,43492468,43492095,43491753,43481022,43480017,43479526,43477759,43475694,43474767,43470066,43457218,43447485,43446590,43441583,43438416,43432677,43428168,43422126,43421174,43420735,43416416,43415809,43413334,43409741,43409096,43408088,43407570	Gene ID= ENSG00000067369.13 TPM= 10.62 Transcript Type= protein_coding
chr15	43407216	43493127	43407216	43493127	-	ENST00000450115.6@TP53BP1	ENST00000450115.6	protein_coding	43493037,43492284,43492002,43491669,43480895,43479859,43479397,43477593,43475565,43474673,43469858,43455892,43447366,43446387,43441526,43438324,43432194,43428016,43421855,43421025,43420305,43416225,43415594,43413119,43409647,43408897,43407943,43407216	43493127,43492468,43492095,43491753,43481022,43480017,43479526,43477759,43475694,43474767,43470066,43457218,43447485,43446590,43441583,43438416,43432677,43428168,43422126,43421174,43420735,43416416,43415809,43413328,43409741,43409096,43408088,43407570	Gene ID= ENSG00000067369.13 TPM= 1.93 Transcript Type= protein_coding
chr15	43510958	43531620	43510958	43531620	+	ENST00000382031.5@MAP1A	ENST00000382031.5	protein_coding	43510958,43512190,43520641,43520972,43521324,43529650,43530069	43511226,43512291,43520723,43521112,43529508,43529870,43531620	Gene ID= ENSG00000166963.12 TPM= 3.86 Transcript Type= protein_coding
chr15	43746375	43769582	43746375	43769582	+	transcript780.chr15.nic@PDIA3	transcript780.chr15.nic	protein_coding	43746375,43753824,43756649,43761424,43763077,43765450,43765887,43766728,43768489,43769518	43746706,43753902,43756766,43761531,43763206,43765566,43766012,43766910,43768597,43769582	Gene ID= ENSG00000167004.12 TPM= 3.86 Transcript Type= NA
chr15	43746392	43773279	43746392	43773279	+	ENST00000300289.9@PDIA3	ENST00000300289.9	protein_coding	43746392,43753824,43756649,43761424,43763077,43765450,43765887,43766728,43768489,43769518,43770250,43770523,43771105	43746706,43753902,43756766,43761531,43763206,43765566,43766012,43766910,43768597,43769646,43770329,43770580,43773279	Gene ID= ENSG00000167004.12 TPM= 7.72 Transcript Type= protein_coding
chr15	43772600	43777543	43772600	43777543	-	ENST00000319359.7@ELL3	ENST00000319359.7	protein_coding	43776770,43776509,43776039,43775722,43775525,43775306,43774596,43774476,43774182,43773304,43772600	43777543,43776544,43776151,43775923,43775610,43775381,43774773,43774518,43774353,43773348,43773226	Gene ID= ENSG00000128886.11 TPM= 5.79 Transcript Type= protein_coding
chr15	43792368	43794046	43792368	43794046	+	ENST00000403425.5@SERF2	ENST00000403425.5	protein_coding	43792368,43792975,43793710	43792611,43793083,43794046	Gene ID= ENSG00000140264.19 TPM= 23.65 Transcript Type= protein_coding
chr15	43792347	43794046	43792347	43794046	+	ENST00000339624.9@SERF2	ENST00000339624.9	protein_coding	43792347,43792975,43793687	43792383,43793083,43794046	Gene ID= ENSG00000140264.19 TPM= 350.89 Transcript Type= protein_coding
chr15	43792337	43796089	43792337	43796089	+	ENST00000445816.5@SERF2	ENST00000445816.5	protein_coding	43792337,43792975,43793710,43794374	43792383,43793083,43793936,43796089	Gene ID= ENSG00000140264.19 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr15	43804492	43824802	43804492	43824802	-	ENST00000267812.3@MFAP1	ENST00000267812.3	protein_coding	43824491,43817229,43814945,43814501,43813249,43812987,43809755,43805376,43804492	43824802,43817448,43815074,43814688,43813357,43813147,43809914,43805465,43805276	Gene ID= ENSG00000140259.6 TPM= 11.58 Transcript Type= protein_coding
chr15	44288731	44415758	44288731	44415758	+	ENST00000299957.10@CASC4	ENST00000299957.10	protein_coding	44288731,44322965,44328685,44331988,44337763,44338237,44379690,44380806,44402887,44413336	44289356,44323019,44328787,44332078,44337907,44338317,44379788,44380976,44403054,44415758	Gene ID= ENSG00000166734.18 TPM= 19.79 Transcript Type= protein_coding
chr15	44288709	44382294	44288709	44382294	+	transcript820.chr15.nic@CASC4	transcript820.chr15.nic	protein_coding	44288709,44322965,44328685,44331988,44337763,44338237,44379690,44380806	44289356,44323019,44328787,44332078,44337907,44338317,44379788,44382294	Gene ID= ENSG00000166734.18 TPM= 1.93 Transcript Type= NA
chr15	44288760	44415757	44288760	44415757	+	ENST00000345795.6@CASC4	ENST00000345795.6	protein_coding	44288760,44322965,44328685,44331988,44337763,44338237,44379690,44380806,44413336	44289356,44323019,44328787,44332078,44337907,44338317,44379788,44380976,44415757	Gene ID= ENSG00000166734.18 TPM= 8.21 Transcript Type= protein_coding
chr15	44427234	44529038	44427234	44529038	+	ENST00000260327.8@CTDSPL2	ENST00000260327.8	protein_coding	44427234,44458991,44484224,44486551,44490784,44496380,44497027,44499727,44514598,44514765,44519169,44521311,44524109	44427772,44459200,44484362,44486700,44490999,44496458,44497138,44499813,44514660,44514844,44519295,44521406,44529038	Gene ID= ENSG00000137770.13 TPM= 4.83 Transcript Type= protein_coding
chr15	44537108	44564581	44537108	44564581	+	transcript829.chr15.nic@EIF3J	transcript829.chr15.nic	protein_coding	44537108,44537324,44550876,44551431,44554553,44557489,44560249,44561018,44562951	44537237,44537427,44550930,44551522,44554667,44557650,44560322,44561742,44564581	Gene ID= ENSG00000104131.12 TPM= 5.07 Transcript Type= NA
chr15	44537057	44562803	44537057	44562803	+	ENST00000261868.9@EIF3J	ENST00000261868.9	protein_coding	44537057,44537324,44550876,44551431,44554553,44557489,44560249,44561018	44537237,44537427,44550930,44551522,44554667,44557650,44560322,44562803	Gene ID= ENSG00000104131.12 TPM= 54.3 Transcript Type= protein_coding
chr15	44562696	44663664	44562696	44663664	-	ENST00000261866.11@SPG11	ENST00000261866.11	protein_coding	44663391,44660432,44659079,44657095,44652129,44651491,44648866,44633505,44629233,44628669,44626331,44622728,44622220,44621759,44620190,44615363,44613430,44610840,44608444,44606025,44600467,44598631,44598265,44596784,44596083,44595259,44592331,44589252,44585636,44583814,44574902,44573547,44572683,44570525,44569398,44567424,44566217,44565854,44564547,44562696	44663664,44660616,44659303,44657296,44652266,44651939,44649011,44633637,44629388,44628844,44626507,44622799,44622347,44621934,44620403,44615566,44613536,44610985,44608605,44606091,44600632,44598836,44598373,44596943,44596355,44595459,44592438,44589414,44585850,44584558,44575041,44573745,44572820,44570658,44569505,44567592,44566305,44566009,44564698,44563301	Gene ID= ENSG00000104133.14 TPM= 10.62 Transcript Type= protein_coding
chr15	44566958	44568279	44566958	44568279	+	transcript849.chr15.nnic@NA	transcript849.chr15.nnic	NA	44566958	44568279	Gene ID= novel_gene_chr15_850 TPM= 1.93 Transcript Type= NA
chr15	44729034	44767825	44729034	44767825	+	transcript861.chr15.nnic@TRIM69	transcript861.chr15.nnic	protein_coding	44729034,44731363,44736483,44754900,44756368,44758613,44759640,44759748,44767231	44729552,44731930,44736710,44755376,44756463,44758854,44759662,44759872,44767825	Gene ID= ENSG00000185880.12 TPM= 2.41 Transcript Type= NA
chr15	44729001	44734000	44729001	44734000	+	ENST00000560141.2@TRIM69	ENST00000560141.2	protein_coding	44729001,44731363	44729552,44734000	Gene ID= ENSG00000185880.12 TPM= 12.07 Transcript Type= processed_transcript
chr15	45361124	45378793	45361124	45378793	-	ENST00000396659.7@GATM	ENST00000396659.7	protein_coding	45378385,45376601,45369326,45368070,45366371,45366046,45364797,45363900,45361124	45378793,45376819,45369521,45368260,45366508,45366210,45364860,45364016,45362221	Gene ID= ENSG00000171766.15 TPM= 34.75 Transcript Type= protein_coding
chr15	45402319	45421419	45402319	45421419	+	transcript881.chr15.nnic@SPATA5L1	transcript881.chr15.nnic	protein_coding	45402319,45405320,45407062,45410372,45414571,45415587,45417269,45418557,45421043	45403518,45405505,45407223,45410530,45414780,45415779,45417399,45418682,45421419	Gene ID= ENSG00000171763.18 TPM= 2.9 Transcript Type= NA
chr15	45402331	45421419	45402331	45421419	+	ENST00000305560.10@SPATA5L1	ENST00000305560.10	protein_coding	45402331,45405320,45410372,45414571,45415587,45417269,45418557,45421043	45403518,45405505,45410530,45414780,45415779,45417399,45418682,45421419	Gene ID= ENSG00000171763.18 TPM= 42.47 Transcript Type= protein_coding
chr15	45402375	45421327	45402375	45421327	+	ENST00000531970.5@SPATA5L1	ENST00000531970.5	protein_coding	45402375,45405320,45410372,45414571,45415587,45417269,45418557,45421043	45403518,45405505,45410530,45414780,45415809,45417399,45418682,45421327	Gene ID= ENSG00000171763.18 TPM= 13.51 Transcript Type= nonsense_mediated_decay
chr15	45587123	45609711	45587123	45609711	+	ENST00000220531.7@BLOC1S6	ENST00000220531.7	protein_coding	45587123,45592135,45603100,45605428,45606395	45587525,45592276,45603187,45605514,45609711	Gene ID= ENSG00000104164.10 TPM= 16.41 Transcript Type= protein_coding
chr15	45587379	45607773	45587379	45607773	+	ENST00000567523.5@BLOC1S6	ENST00000567523.5	protein_coding	45587379,45592135,45603104,45605428,45606395	45587525,45592276,45603187,45605514,45607773	Gene ID= ENSG00000104164.10 TPM= 13.51 Transcript Type= nonsense_mediated_decay
chr15	45634727	45691280	45634727	45691280	+	transcript900.chr15.nic@SQOR	transcript900.chr15.nic	protein_coding	45634727,45658907,45661955,45669928,45673607,45676101,45682478,45688337,45689039,45690973	45634894,45659157,45662125,45669981,45673801,45676310,45682661,45688404,45689217,45691280	Gene ID= ENSG00000137767.13 TPM= 81.67 Transcript Type= NA
chr15	45634740	45691294	45634740	45691294	+	ENST00000260324.11@SQOR	ENST00000260324.11	protein_coding	45634740,45658907,45661955,45669928,45673607,45676101,45682478,45688337,45689039,45690973	45635108,45659157,45662125,45669981,45673801,45676310,45682661,45688404,45689217,45691294	Gene ID= ENSG00000137767.13 TPM= 351.95 Transcript Type= protein_coding
chr15	45634789	45674017	45634789	45674017	+	transcript919.chr15.nic@SQOR	transcript919.chr15.nic	protein_coding	45634789,45658907,45661955,45669928,45673607	45635108,45659157,45662125,45669981,45674017	Gene ID= ENSG00000137767.13 TPM= 11.58 Transcript Type= NA
chr15	48331405	48342293	48331405	48342293	+	ENST00000558813.5@DUT	ENST00000558813.5	protein_coding	48331405,48332268,48334417,48336046,48341289,48341515,48342022	48331479,48332406,48334508,48336090,48341363,48341585,48342293	Gene ID= ENSG00000128951.13 TPM= 2.9 Transcript Type= protein_coding
chr15	48331423	48343373	48331423	48343373	+	ENST00000331200.7@DUT	ENST00000331200.7	protein_coding	48331423,48332268,48334417,48336046,48341289,48341515,48342022	48331795,48332406,48334508,48336090,48341363,48341585,48343373	Gene ID= ENSG00000128951.13 TPM= 2.9 Transcript Type= protein_coding
chr15	48877886	48880183	48877886	48880183	+	ENST00000530028.2@EID1	ENST00000530028.2	protein_coding	48877886	48880183	Gene ID= ENSG00000255302.4 TPM= 1.93 Transcript Type= protein_coding
chr15	49122728	49155652	49122728	49155652	-	ENST00000388901.9@COPS2	ENST00000388901.9	protein_coding	49155525,49144965,49144227,49139528,49137348,49137150,49134340,49133930,49133759,49130719,49129477,49128702,49122728	49155652,49145078,49144304,49139653,49137437,49137227,49134514,49134108,49133811,49130816,49129559,49128760,49128094	Gene ID= ENSG00000166200.14 TPM= 22.2 Transcript Type= protein_coding
chr15	49127350	49155661	49127350	49155661	-	ENST00000299259.10@COPS2	ENST00000299259.10	protein_coding	49155525,49144965,49144227,49139528,49137348,49137150,49134340,49133930,49133759,49130719,49129477,49128702,49127350	49155661,49145078,49144304,49139653,49137458,49137227,49134514,49134108,49133811,49130816,49129559,49128760,49128094	Gene ID= ENSG00000166200.14 TPM= 18.34 Transcript Type= protein_coding
chr15	49155744	49329823	49155744	49329823	+	transcript989.chr15.nic@GALK2	transcript989.chr15.nic	protein_coding	49155744,49161740,49201162,49217190,49235851,49239221,49281987,49283566,49292327,49319604,49327952	49156016,49161861,49201250,49217313,49235941,49239367,49282085,49283718,49292537,49319805,49329823	Gene ID= ENSG00000156958.14 TPM= 1.93 Transcript Type= NA
chr15	49155765	49331882	49155765	49331882	+	ENST00000327171.7@GALK2	ENST00000327171.7	protein_coding	49155765,49201162,49217190,49235851,49239221,49281987,49283566,49292327,49319604,49327952	49156016,49201250,49217313,49235941,49239367,49282085,49283718,49292537,49319805,49331882	Gene ID= ENSG00000156958.14 TPM= 3.86 Transcript Type= protein_coding
chr15	49620980	49644049	49620980	49644049	+	ENST00000403028.7@DTWD1	ENST00000403028.7	protein_coding	49620980,49625113,49632159,49634536,49643331	49621122,49625431,49632302,49634794,49644049	Gene ID= ENSG00000104047.14 TPM= 2.9 Transcript Type= protein_coding
chr15	50277263	50355223	50277263	50355223	-	transcript1026.chr15.nic@GABPB1	transcript1026.chr15.nic	protein_coding	50354985,50346372,50309691,50303966,50302929,50301221,50300789,50289483,50286068,50277263	50355223,50346395,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784	Gene ID= ENSG00000104064.16 TPM= 1.93 Transcript Type= NA
chr15	50275392	50355408	50275392	50355408	-	ENST00000380877.7@GABPB1	ENST00000380877.7	protein_coding	50354985,50309691,50303966,50302929,50301257,50300789,50289483,50286068,50275392	50355408,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784	Gene ID= ENSG00000104064.16 TPM= 6.76 Transcript Type= protein_coding
chr15	50277263	50355153	50277263	50355153	-	ENST00000220429.12@GABPB1	ENST00000220429.12	protein_coding	50354985,50309691,50303966,50302929,50301221,50300789,50289483,50286068,50277263	50355153,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784	Gene ID= ENSG00000104064.16 TPM= 3.86 Transcript Type= protein_coding
chr15	50354205	50356358	50354205	50356358	+	transcript1037.chr15.nnic@NA	transcript1037.chr15.nnic	NA	50354205	50356358	Gene ID= novel_gene_chr15_1038 TPM= 4.83 Transcript Type= NA
chr15	50424347	50499776	50424347	50499776	+	transcript1046.chr15.nic@USP8	transcript1046.chr15.nic	protein_coding	50424347,50432338,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424654,50432499,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776	Gene ID= ENSG00000138592.13 TPM= 1.93 Transcript Type= NA
chr15	50424375	50499776	50424375	50499776	+	transcript1053.chr15.nic@USP8	transcript1053.chr15.nic	protein_coding	50424375,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424514,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776	Gene ID= ENSG00000138592.13 TPM= 2.9 Transcript Type= NA
chr15	50424399	50481823	50424399	50481823	+	transcript1059.chr15.nic@USP8	transcript1059.chr15.nic	protein_coding	50424399,50432338,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481	50424514,50432499,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50481823	Gene ID= ENSG00000138592.13 TPM= 3.86 Transcript Type= NA
chr15	50424360	50481823	50424360	50481823	+	transcript1060.chr15.nic@USP8	transcript1060.chr15.nic	protein_coding	50424360,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481	50424654,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50481823	Gene ID= ENSG00000138592.13 TPM= 1.93 Transcript Type= NA
chr15	50424382	50499776	50424382	50499776	+	ENST00000307179.8@USP8	ENST00000307179.8	protein_coding	50424382,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50484275,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424514,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50484361,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776	Gene ID= ENSG00000138592.13 TPM= 4.83 Transcript Type= protein_coding
chr15	50679209	50682189	50679209	50682189	+	transcript1064.chr15.nnic@NA	transcript1064.chr15.nnic	NA	50679209	50682189	Gene ID= novel_gene_chr15_1065 TPM= 2.9 Transcript Type= NA
chr15	50702270	50765699	50702270	50765699	-	transcript1069.chr15.nnic@SPPL2A	transcript1069.chr15.nnic	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50719940,50707416,50702270	50765699,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50720100,50707874,50706126	Gene ID= ENSG00000138600.9 TPM= 7.96 Transcript Type= NA
chr15	50704531	50765948	50704531	50765948	-	transcript1077.chr15.nnic@SPPL2A	transcript1077.chr15.nnic	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50719940,50707524,50704531	50765948,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50720100,50707874,50706124	Gene ID= ENSG00000138600.9 TPM= 8.93 Transcript Type= NA
chr15	50707577	50766021	50707577	50766021	-	transcript1083.chr15.nic@SPPL2A	transcript1083.chr15.nic	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50726073,50725221,50722124,50719940,50707577	50766021,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50726126,50725323,50722201,50720100,50707874	Gene ID= ENSG00000138600.9 TPM= 13.03 Transcript Type= NA
chr15	50707577	50766237	50707577	50766237	-	transcript1087.chr15.nnic@SPPL2A	transcript1087.chr15.nnic	protein_coding	50766024,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50719940,50707577	50766237,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50720100,50707874	Gene ID= ENSG00000138600.9 TPM= 2.9 Transcript Type= NA
chr15	50707577	50765946	50707577	50765946	-	transcript1091.chr15.nnic@SPPL2A	transcript1091.chr15.nnic	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50707577	50765946,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50707874	Gene ID= ENSG00000138600.9 TPM= 2.9 Transcript Type= NA
chr15	50908673	51005900	50908673	51005900	+	ENST00000261842.9@AP4E1	ENST00000261842.9	protein_coding	50908673,50912078,50915448,50923931,50925098,50929009,50930805,50934624,50941442,50941666,50948020,50949826,50950051,50958492,50968263,50984022,50993370,50997326,50999072,51001026,51002502	50908928,50912149,50915571,50924004,50925219,50929168,50930971,50934697,50941564,50941775,50948159,50949938,50950169,50958794,50968377,50984145,50993625,50997883,50999262,51001183,51005900	Gene ID= ENSG00000081014.10 TPM= 2.9 Transcript Type= protein_coding
chr15	51723011	51738137	51723011	51738137	-	ENST00000267838.6@LYSMD2	ENST00000267838.6	protein_coding	51737350,51724790,51723011	51738137,51725121,51723649	Gene ID= ENSG00000140280.13 TPM= 8.69 Transcript Type= protein_coding
chr15	51812173	51815916	51812173	51815916	+	transcript1107.chr15.nnic@NA	transcript1107.chr15.nnic	NA	51812173	51815916	Gene ID= novel_gene_chr15_1108 TPM= 2.9 Transcript Type= NA
chr15	51938025	51971770	51938025	51971770	-	transcript1113.chr15.nnic@LEO1	transcript1113.chr15.nnic	protein_coding	51971688,51965749,51962389,51960639,51959899,51958742,51954481,51953129,51951844,51949808,51947292,51941501,51938025	51971770,51966504,51962493,51960733,51960044,51958826,51954575,51953263,51951979,51949994,51947389,51941598,51938260	Gene ID= ENSG00000166477.12 TPM= 1.93 Transcript Type= NA
chr15	51938025	51971806	51938025	51971806	-	ENST00000299601.9@LEO1	ENST00000299601.9	protein_coding	51971688,51965749,51962389,51960639,51959899,51958742,51954481,51953129,51951844,51949808,51947292,51938025	51971806,51966504,51962493,51960733,51960044,51958826,51954575,51953263,51951979,51949994,51947389,51938260	Gene ID= ENSG00000166477.12 TPM= 17.38 Transcript Type= protein_coding
chr15	52019229	52066144	52019229	52066144	+	transcript1116.chr15.nic@MAPK6	transcript1116.chr15.nic	protein_coding	52019229,52042754,52045830,52049993,52058633,52061299,52063902	52019376,52042833,52047015,52050137,52058797,52061500,52066144	Gene ID= ENSG00000069956.11 TPM= 6.27 Transcript Type= NA
chr15	52019938	52066144	52019938	52066144	+	transcript1121.chr15.nic@MAPK6	transcript1121.chr15.nic	protein_coding	52019938,52045830,52049993,52058633,52061299,52063902	52020032,52047015,52050137,52058797,52061500,52066144	Gene ID= ENSG00000069956.11 TPM= 7.24 Transcript Type= NA
chr15	52019194	52045966	52019194	52045966	+	transcript1127.chr15.nic@MAPK6	transcript1127.chr15.nic	protein_coding	52019194,52045830	52019376,52045966	Gene ID= ENSG00000069956.11 TPM= 1.93 Transcript Type= NA
chr15	52313109	52529125	52313109	52529125	-	transcript1131.chr15.nnic@MYO5A	transcript1131.chr15.nnic	protein_coding	52528780,52433175,52428398,52425830,52416145,52415116,52410333,52408059,52407292,52405287,52397201,52396316,52391930,52389238,52387829,52384161,52383091,52379822,52379625,52376347,52375304,52372124,52370169,52367031,52364554,52359968,52353871,52353605,52351254,52348818,52346361,52340196,52337810,52336463,52331699,52330353,52327852,52323355,52321359,52319060,52317048,52314123,52313109	52529125,52433285,52428569,52425974,52416301,52415202,52410476,52408140,52407399,52405393,52397466,52396397,52392070,52389363,52387912,52384322,52383188,52379908,52379733,52376558,52375460,52372363,52370417,52367124,52364702,52360081,52354014,52353658,52351481,52348826,52346461,52340394,52337884,52336556,52331836,52330499,52328006,52323444,52321509,52319342,52317222,52314203,52313848	Gene ID= ENSG00000197535.14 TPM= 1.93 Transcript Type= NA
chr15	52551186	52569213	52551186	52569213	-	transcript1136.chr15.nic@ARPP19	transcript1136.chr15.nic	protein_coding	52569116,52568848,52564190,52557100,52551186	52569213,52568902,52564246,52557222,52552104	Gene ID= ENSG00000128989.10 TPM= 9.01 Transcript Type= NA
chr15	52547045	52569239	52547045	52569239	-	ENST00000566423.5@ARPP19	ENST00000566423.5	protein_coding	52569116,52568848,52557100,52547045	52569239,52568902,52557222,52552104	Gene ID= ENSG00000128989.10 TPM= 2.9 Transcript Type= protein_coding
chr15	52547244	52569164	52547244	52569164	-	ENST00000249822.8@ARPP19	ENST00000249822.8	protein_coding	52568848,52557100,52547244	52569164,52557222,52552104	Gene ID= ENSG00000128989.10 TPM= 16.41 Transcript Type= protein_coding
chr15	52549527	52568832	52549527	52568832	-	ENST00000561650.5@ARPP19	ENST00000561650.5	protein_coding	52568289,52557100,52549527	52568832,52557222,52552104	Gene ID= ENSG00000128989.10 TPM= 1.93 Transcript Type= protein_coding
chr15	52581321	52679335	52581321	52679335	-	transcript1158.chr15.nic@FAM214A	transcript1158.chr15.nic	protein_coding	52678430,52678006,52613673,52611575,52611130,52608568,52605133,52601086,52600127,52593578,52587151,52584745,52581321	52679335,52678122,52613857,52611777,52611255,52610383,52605246,52601165,52600235,52593736,52587219,52584944,52582307	Gene ID= ENSG00000047346.12 TPM= 6.76 Transcript Type= NA
chr15	55180806	55197067	55180806	55197067	-	ENST00000260443.8@RSL24D1	ENST00000260443.8	protein_coding	55196810,55192720,55190975,55185362,55183315,55180806	55197067,55192833,55191047,55185425,55183400,55182225	Gene ID= ENSG00000137876.9 TPM= 77.22 Transcript Type= protein_coding
chr15	55317188	55319160	55317188	55319160	-	transcript1216.chr15.nnic@PIGBOS1	transcript1216.chr15.nnic	protein_coding	55318931,55317188	55319160,55317867	Gene ID= ENSG00000225973.3 TPM= 1.93 Transcript Type= NA
chr15	55318960	55355648	55318960	55355648	+	ENST00000164305.9@PIGB	ENST00000164305.9	protein_coding	55318960,55320275,55321273,55327531,55329724,55333867,55339267,55340612,55341738,55350699,55354798,55355286	55319413,55320410,55321390,55327635,55329854,55334007,55339318,55340823,55341802,55350912,55354978,55355648	Gene ID= ENSG00000069943.9 TPM= 1.93 Transcript Type= protein_coding
chr15	55355239	55408369	55355239	55408369	-	transcript1186.chr15.nic@CCPG1	transcript1186.chr15.nic	protein_coding	55408221,55389365,55385600,55378300,55376949,55374155,55371793,55365188,55359539,55355239	55408369,55389433,55385714,55378376,55377150,55374250,55372044,55365309,55360944,55356409	Gene ID= ENSG00000260916.7 TPM= 7.08 Transcript Type= NA
chr15	55358839	55408307	55358839	55408307	-	transcript1195.chr15.nic@CCPG1	transcript1195.chr15.nic	protein_coding	55408221,55389365,55385600,55378300,55376949,55374155,55371793,55365188,55358839	55408307,55389433,55385714,55378376,55377150,55374250,55372044,55365309,55360944	Gene ID= ENSG00000260916.7 TPM= 3.21 Transcript Type= NA
chr15	55355250	55408510	55355250	55408510	-	ENST00000310958.10@CCPG1	ENST00000310958.10	protein_coding	55408221,55389365,55385600,55378300,55376949,55371793,55365188,55355250	55408510,55389433,55385714,55378376,55377150,55372044,55365309,55360944	Gene ID= ENSG00000260916.7 TPM= 8.69 Transcript Type= protein_coding
chr15	55355239	55408259	55355239	55408259	-	ENST00000442196.7@CCPG1	ENST00000442196.7	protein_coding	55408221,55389365,55385600,55378300,55376949,55371793,55365188,55359539,55355239	55408259,55389433,55385714,55378376,55377150,55372044,55365309,55360944,55356409	Gene ID= ENSG00000260916.7 TPM= 4.83 Transcript Type= protein_coding
chr15	55588095	55589814	55588095	55589814	+	transcript1224.chr15.nnic@NA	transcript1224.chr15.nnic	NA	55588095	55589814	Gene ID= novel_gene_chr15_1225 TPM= 4.83 Transcript Type= NA
chr15	55826922	55993746	55826922	55993746	-	ENST00000435532.7@NEDD4	ENST00000435532.7	protein_coding	55993511,55966473,55951511,55951376,55924646,55873958,55872415,55869579,55862913,55860661,55860407,55856131,55852424,55850542,55848806,55848521,55848372,55846969,55841934,55840606,55840447,55838509,55838107,55837789,55834227,55834038,55833008,55830514,55826922	55993746,55966546,55951589,55951414,55924699,55874008,55872476,55869681,55863079,55860778,55860574,55856196,55852543,55850742,55848886,55848575,55848430,55847034,55842163,55840727,55840517,55838604,55838180,55837849,55834286,55834145,55833104,55830586,55829999	Gene ID= ENSG00000069869.15 TPM= 17.69 Transcript Type= protein_coding
chr15	55849792	55993635	55849792	55993635	-	transcript1246.chr15.nic@NEDD4	transcript1246.chr15.nic	protein_coding	55993511,55966473,55951511,55951376,55924646,55873958,55872415,55869579,55862913,55860661,55860407,55856131,55852424,55849792	55993635,55966546,55951589,55951414,55924699,55874008,55872476,55869681,55863079,55860778,55860574,55856196,55852543,55850742	Gene ID= ENSG00000069869.15 TPM= 1.93 Transcript Type= NA
chr15	55826922	55917131	55826922	55917131	-	ENST00000508342.5@NEDD4	ENST00000508342.5	protein_coding	55915284,55873958,55872415,55869579,55862913,55860661,55860407,55856131,55852424,55850542,55848806,55848521,55848372,55846969,55841934,55840606,55840447,55838509,55838107,55837789,55834227,55834038,55833008,55830514,55826922	55917131,55874008,55872476,55869681,55863079,55860778,55860574,55856196,55852543,55850742,55848886,55848575,55848430,55847034,55842163,55840727,55840517,55838604,55838180,55837849,55834286,55834145,55833104,55830586,55829999	Gene ID= ENSG00000069869.15 TPM= 44.24 Transcript Type= protein_coding
chr15	55826922	55917131	55826922	55917131	-	ENST00000338963.6@NEDD4	ENST00000338963.6	protein_coding	55915284,55862913,55860661,55860407,55856131,55852424,55850542,55848806,55848521,55848372,55846969,55841934,55840606,55840447,55838509,55838107,55837789,55834227,55834038,55833008,55830514,55826922	55917131,55863079,55860778,55860574,55856196,55852543,55850742,55848886,55848575,55848430,55847034,55842163,55840727,55840517,55838604,55838180,55837849,55834286,55834145,55833104,55830586,55829999	Gene ID= ENSG00000069869.15 TPM= 15.28 Transcript Type= protein_coding
chr15	56090538	56094022	56090538	56094022	-	transcript1254.chr15.nnic@NA	transcript1254.chr15.nnic	NA	56090538	56094022	Gene ID= novel_gene_chr15_1255 TPM= 2.9 Transcript Type= NA
chr15	56916726	56918493	56916726	56918493	-	ENST00000560587.1@ZNF280D	ENST00000560587.1	protein_coding	56917540,56916726	56918493,56917212	Gene ID= ENSG00000137871.19 TPM= 7.72 Transcript Type= processed_transcript
chr15	56918705	57288508	56918705	57288508	+	transcript1266.chr15.nnic@TCF12	transcript1266.chr15.nnic	protein_coding	56918705,56919892,56921026,57063750,57072653,57091789,57166402,57192158,57197773,57231152,57232291,57232712,57234043,57243472,57251350,57253262,57262094,57263112,57273030,57282445,57286157	56918906,56919988,56921098,57063823,57072714,57091891,57166466,57192293,57197825,57231257,57232430,57232856,57234107,57243550,57251423,57253468,57262208,57263274,57273262,57282598,57288508	Gene ID= ENSG00000140262.17 TPM= 2.9 Transcript Type= NA
chr15	56918625	57289853	56918625	57289853	+	ENST00000267811.9@TCF12	ENST00000267811.9	protein_coding	56918625,56919892,56921026,57063750,57091789,57166402,57192158,57197773,57231152,57232291,57232712,57234043,57243472,57251350,57253262,57262094,57263112,57273030,57282445,57286157	56918906,56919988,56921098,57063823,57091891,57166466,57192293,57197825,57231257,57232430,57232856,57234107,57243550,57251423,57253468,57262208,57263274,57273262,57282598,57289853	Gene ID= ENSG00000140262.17 TPM= 26.06 Transcript Type= protein_coding
chr15	57591941	57685364	57591941	57685364	+	ENST00000267853.9@MYZAP	ENST00000267853.9	protein_coding	57591941,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57661450,57674968,57684402	57592109,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57661533,57675068,57685364	Gene ID= ENSG00000263155.5 TPM= 14.48 Transcript Type= protein_coding
chr15	57706669	57717554	57706669	57717554	+	transcript1291.chr15.nnic@POLR2M	transcript1291.chr15.nnic	protein_coding	57706669,57708956,57711984,57714536	57706955,57709358,57712188,57717554	Gene ID= ENSG00000255529.7 TPM= 8.21 Transcript Type= NA
chr15	57706629	57717557	57706629	57717557	+	ENST00000299638.7@POLR2M	ENST00000299638.7	protein_coding	57706629,57708714,57711984,57714536	57706955,57709358,57712188,57717557	Gene ID= ENSG00000255529.7 TPM= 62.26 Transcript Type= protein_coding
chr15	57706695	57714882	57706695	57714882	+	ENST00000494490.1@POLR2M	ENST00000494490.1	protein_coding	57706695,57708714,57711984,57714536	57707145,57709358,57712188,57714882	Gene ID= ENSG00000255529.7 TPM= 1.93 Transcript Type= protein_coding
chr15	57706725	57717554	57706725	57717554	+	ENST00000380557.4@POLR2M	ENST00000380557.4	protein_coding	57706725,57709185,57711984,57714536	57706955,57709358,57712188,57717554	Gene ID= ENSG00000255529.7 TPM= 5.79 Transcript Type= protein_coding
chr15	57953424	58066418	57953424	58066418	-	ENST00000249750.8@ALDH1A2	ENST00000249750.8	protein_coding	58065534,58014177,58013858,58010649,57995078,57992945,57992705,57965725,57963885,57962012,57961137,57960770,57953424	58066418,58014281,58013998,58010778,57995139,57993073,57992818,57965827,57964069,57962176,57961294,57960844,57955269	Gene ID= ENSG00000128918.14 TPM= 10.62 Transcript Type= protein_coding
chr15	58588807	58749978	58588807	58749978	-	ENST00000260408.7@ADAM10	ENST00000260408.7	protein_coding	58749480,58717577,58682196,58679124,58665097,58646055,58643886,58640777,58633196,58627700,58621471,58611808,58610999,58610297,58599598,58588807	58749978,58717727,58682314,58679282,58665197,58646204,58643978,58640960,58633359,58627883,58621621,58611991,58611107,58610517,58599724,58597641	Gene ID= ENSG00000137845.14 TPM= 9.65 Transcript Type= protein_coding
chr15	58596972	58749812	58596972	58749812	-	transcript1300.chr15.nnic@ADAM10	transcript1300.chr15.nnic	protein_coding	58749480,58717577,58665097,58646055,58643886,58640777,58633196,58627700,58621471,58611808,58610999,58610297,58599598,58596972	58749812,58717727,58665197,58646204,58643978,58640960,58633359,58627883,58621621,58611991,58611107,58610517,58599724,58597641	Gene ID= ENSG00000137845.14 TPM= 1.93 Transcript Type= NA
chr15	58893279	58933683	58893279	58933683	-	transcript1313.chr15.nic@SLTM	transcript1313.chr15.nic	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279	58933683,58932443,58916999,58913696,58912610,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364	Gene ID= ENSG00000137776.16 TPM= 1.93 Transcript Type= NA
chr15	58929940	58933617	58929940	58933617	-	transcript1337.chr15.nnic@SLTM	transcript1337.chr15.nnic	protein_coding	58933404,58930612,58929940	58933617,58932443,58930250	Gene ID= ENSG00000137776.16 TPM= 1.93 Transcript Type= NA
chr15	58879045	58933653	58879045	58933653	-	ENST00000380516.6@SLTM	ENST00000380516.6	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933653,58932443,58916999,58913696,58912610,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 3.86 Transcript Type= protein_coding
chr15	58894158	58933579	58894158	58933579	-	ENST00000249736.11@SLTM	ENST00000249736.11	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894158	58933579,58932443,58916999,58913696,58912610,58901287,58899883,58898852,58897233,58894582,58894193	Gene ID= ENSG00000137776.16 TPM= 1.93 Transcript Type= protein_coding
chr15	58987655	59097419	58987655	59097419	+	ENST00000348370.8@RNF111	ENST00000348370.8	protein_coding	58987655,59030804,59052305,59055682,59058356,59066764,59075954,59080936,59084129,59085659,59089667,59091059,59092537,59094783	58988068,59031702,59052431,59055845,59058550,59067083,59076215,59081284,59084254,59085785,59089759,59091154,59092640,59097419	Gene ID= ENSG00000157450.15 TPM= 8.69 Transcript Type= protein_coding
chr15	59132434	59372900	59132434	59372900	-	ENST00000288235.8@MYO1E	ENST00000288235.8	protein_coding	59372498,59272306,59261420,59256284,59236585,59231702,59227459,59224689,59223059,59217891,59214640,59214228,59210514,59208681,59205400,59202326,59195461,59188118,59178393,59174126,59173746,59171897,59163157,59161073,59158287,59153590,59138198,59132434	59372900,59272449,59261509,59256378,59236672,59231791,59227590,59224823,59223191,59218087,59214720,59214314,59210600,59208848,59205485,59202407,59195567,59188216,59178537,59174240,59173915,59172042,59163303,59161230,59158379,59153791,59138367,59137456	Gene ID= ENSG00000157483.8 TPM= 7.72 Transcript Type= protein_coding
chr15	59371437	59372868	59371437	59372868	-	transcript1347.chr15.nnic@NA	transcript1347.chr15.nnic	NA	59371437	59372868	Gene ID= novel_gene_chr15_1348 TPM= 1.93 Transcript Type= NA
chr15	59638869	59657520	59638869	59657520	-	transcript1353.chr15.nnic@GTF2A2	transcript1353.chr15.nnic	protein_coding	59657406,59650669,59642136,59638869	59657520,59650773,59642262,59639157	Gene ID= ENSG00000140307.10 TPM= 2.9 Transcript Type= NA
chr15	59638859	59657497	59638859	59657497	-	ENST00000267869.8@GTF2A2	ENST00000267869.8	protein_coding	59657406,59642136,59638859	59657497,59642262,59639157	Gene ID= ENSG00000140307.10 TPM= 9.65 Transcript Type= processed_transcript
chr15	59662893	59689330	59662893	59689330	-	transcript1357.chr15.nic@BNIP2	transcript1357.chr15.nic	protein_coding	59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59668103,59665350,59662893	59689330,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59668138,59665442,59664120	Gene ID= ENSG00000140299.11 TPM= 5.79 Transcript Type= NA
chr15	59659146	59689330	59659146	59689330	-	transcript1358.chr15.nic@BNIP2	transcript1358.chr15.nic	protein_coding	59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59668103,59659146	59689330,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59668138,59664120	Gene ID= ENSG00000140299.11 TPM= 16.89 Transcript Type= NA
chr15	59659146	59689534	59659146	59689534	-	ENST00000267859.7@BNIP2	ENST00000267859.7	protein_coding	59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59659146	59689534,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59664120	Gene ID= ENSG00000140299.11 TPM= 7.24 Transcript Type= protein_coding
chr15	59668887	59689329	59668887	59689329	-	transcript1361.chr15.nic@BNIP2	transcript1361.chr15.nic	protein_coding	59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668887	59689329,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990	Gene ID= ENSG00000140299.11 TPM= 13.51 Transcript Type= NA
chr15	59768352	59769146	59768352	59769146	+	ENST00000484430.1@RPS3AP6	ENST00000484430.1	processed_pseudogene	59768352	59769146	Gene ID= ENSG00000234797.5 TPM= 36.68 Transcript Type= processed_pseudogene
chr15	60347337	60397986	60347337	60397986	-	transcript1378.chr15.nic@ANXA2	transcript1378.chr15.nic	protein_coding	60397943,60386028,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347337	60397986,60386086,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689	Gene ID= ENSG00000182718.16 TPM= 31.11 Transcript Type= NA
chr15	60347327	60398043	60347327	60398043	-	ENST00000451270.6@ANXA2	ENST00000451270.6	protein_coding	60397943,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347327	60398043,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689	Gene ID= ENSG00000182718.16 TPM= 753.33 Transcript Type= protein_coding
chr15	60347342	60397986	60347342	60397986	-	ENST00000421017.6@ANXA2	ENST00000421017.6	protein_coding	60397943,60397258,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347342	60397986,60397338,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689	Gene ID= ENSG00000182718.16 TPM= 100.56 Transcript Type= protein_coding
chr15	60497285	60592541	60497285	60592541	-	ENST00000449337.6@RORA	ENST00000449337.6	protein_coding	60592387,60531766,60514616,60511226,60505508,60503535,60502760,60500959,60499892,60497285	60592541,60531851,60514757,60511621,60505629,60503667,60502867,60501069,60500004,60497619	Gene ID= ENSG00000069667.15 TPM= 6.76 Transcript Type= protein_coding
chr15	61503356	61504921	61503356	61504921	-	transcript1418.chr15.nnic@NA	transcript1418.chr15.nnic	NA	61503356	61504921	Gene ID= novel_gene_chr15_1419 TPM= 1.93 Transcript Type= NA
chr15	61638927	61654105	61638927	61654105	-	transcript1417.chr15.nnic@AC018618.1	transcript1417.chr15.nnic	lincRNA	61653880,61653189,61638927	61654105,61653404,61639712	Gene ID= ENSG00000259675.1 TPM= 3.86 Transcript Type= NA
chr15	62163535	62165283	62163535	62165283	-	ENST00000380392.3@C2CD4B	ENST00000380392.3	protein_coding	62165195,62163535	62165283,62165024	Gene ID= ENSG00000205502.3 TPM= 3.86 Transcript Type= protein_coding
chr15	62389933	62392163	62389933	62392163	-	transcript1426.chr15.nnic@NA	transcript1426.chr15.nnic	NA	62389933	62392163	Gene ID= novel_gene_chr15_1427 TPM= 1.93 Transcript Type= NA
chr15	62677808	62680724	62677808	62680724	-	transcript1431.chr15.nnic@NA	transcript1431.chr15.nnic	NA	62677808	62680724	Gene ID= novel_gene_chr15_1432 TPM= 1.93 Transcript Type= NA
chr15	63042742	63066093	63042742	63066093	+	transcript1450.chr15.nnic@TPM1	transcript1450.chr15.nnic	protein_coding	63042742,63044027,63056985,63059563,63060869,63061713,63062215,63062576,63064064,63065896	63042943,63044152,63057118,63059746,63060939,63061788,63062277,63062645,63064142,63066093	Gene ID= ENSG00000140416.19 TPM= 194.05 Transcript Type= NA
chr15	63042685	63071889	63042685	63071889	+	ENST00000358278.7@TPM1	ENST00000358278.7	protein_coding	63042685,63044027,63056985,63059563,63060869,63061198,63062215,63062576,63071090	63042943,63044152,63057118,63059680,63060939,63061273,63062277,63062645,63071889	Gene ID= ENSG00000140416.19 TPM= 4.48 Transcript Type= protein_coding
chr15	63042758	63071900	63042758	63071900	+	ENST00000559397.5@TPM1	ENST00000559397.5	protein_coding	63042758,63043706,63056985,63059563,63060869,63061198,63062215,63062576,63071090	63042943,63043831,63057118,63059680,63060939,63061273,63062277,63062645,63071900	Gene ID= ENSG00000140416.19 TPM= 4.89 Transcript Type= protein_coding
chr15	63042750	63066013	63042750	63066013	+	ENST00000403994.7@TPM1	ENST00000403994.7	protein_coding	63042750,63044027,63056985,63059563,63060869,63061713,63062215,63062576,63064064,63065896	63042943,63044152,63057118,63059680,63060939,63061788,63062277,63062645,63064142,63066013	Gene ID= ENSG00000140416.19 TPM= 7.54 Transcript Type= protein_coding
chr15	63042758	63071915	63042758	63071915	+	ENST00000267996.11@TPM1	ENST00000267996.11	protein_coding	63042758,63043706,63056985,63059563,63060869,63061713,63062215,63062576,63071090	63042943,63043831,63057118,63059680,63060939,63061788,63062277,63062645,63071915	Gene ID= ENSG00000140416.19 TPM= 15.51 Transcript Type= protein_coding
chr15	63048467	63071884	63048467	63071884	+	ENST00000404484.8@TPM1	ENST00000404484.8	protein_coding	63048467,63056985,63059563,63060869,63061198,63062215,63062576,63071090	63048707,63057118,63059680,63060939,63061273,63062277,63062645,63071884	Gene ID= ENSG00000140416.19 TPM= 26.13 Transcript Type= protein_coding
chr15	63121804	63142061	63121804	63142061	+	transcript1502.chr15.nnic@LACTB	transcript1502.chr15.nnic	protein_coding	63121804,63122085,63122636,63126859,63127353,63129485,63141280	63121976,63122228,63122702,63127049,63127689,63129650,63142061	Gene ID= ENSG00000103642.11 TPM= 11.1 Transcript Type= NA
chr15	63121800	63142061	63121800	63142061	+	ENST00000261893.8@LACTB	ENST00000261893.8	protein_coding	63121800,63122636,63126859,63127353,63129485,63141280	63122228,63122702,63127049,63127689,63129650,63142061	Gene ID= ENSG00000103642.11 TPM= 91.22 Transcript Type= protein_coding
chr15	63121802	63129398	63121802	63129398	+	transcript1513.chr15.nic@LACTB	transcript1513.chr15.nic	protein_coding	63121802,63122636,63126859,63127353	63122228,63122702,63127049,63129398	Gene ID= ENSG00000103642.11 TPM= 4.83 Transcript Type= NA
chr15	63148250	63157802	63148250	63157802	-	ENST00000330964.9@RPS27L	ENST00000330964.9	protein_coding	63157400,63156413,63155621,63148250	63157802,63156521,63155731,63154060	Gene ID= ENSG00000185088.13 TPM= 6.76 Transcript Type= protein_coding
chr15	63153859	63158021	63153859	63158021	-	ENST00000411926.1@RPS27L	ENST00000411926.1	protein_coding	63157916,63156413,63155621,63153859	63158021,63156521,63155731,63154060	Gene ID= ENSG00000185088.13 TPM= 3.86 Transcript Type= protein_coding
chr15	63189469	63267782	63189469	63267782	+	ENST00000321437.8@RAB8B	ENST00000321437.8	protein_coding	63189469,63244756,63249645,63255507,63256505,63259627,63262692,63263527	63189748,63244816,63249705,63255584,63256594,63259692,63262742,63267782	Gene ID= ENSG00000166128.12 TPM= 19.31 Transcript Type= protein_coding
chr15	63277554	63309126	63277554	63309126	+	ENST00000261879.9@APH1B	ENST00000261879.9	protein_coding	63277554,63279161,63286558,63287424,63302345,63305614	63277736,63279331,63286628,63287546,63302472,63309126	Gene ID= ENSG00000138613.13 TPM= 7.72 Transcript Type= protein_coding
chr15	63502848	63505107	63502848	63505107	-	transcript1538.chr15.nnic@NA	transcript1538.chr15.nnic	NA	63502848	63505107	Gene ID= novel_gene_chr15_1539 TPM= 1.93 Transcript Type= NA
chr15	63504611	63591467	63504611	63591467	+	ENST00000380324.7@USP3	ENST00000380324.7	protein_coding	63504611,63532647,63537025,63553715,63556667,63558106,63559857,63562895,63570433,63574046,63574323,63588305,63588702,63588944,63590661	63504830,63532707,63537156,63553798,63556748,63558188,63559970,63563008,63570579,63574152,63574403,63588423,63588815,63589011,63591467	Gene ID= ENSG00000140455.16 TPM= 12.55 Transcript Type= protein_coding
chr15	63592450	63593905	63592450	63593905	-	transcript1536.chr15.nnic@NA	transcript1536.chr15.nnic	NA	63592450	63593905	Gene ID= novel_gene_chr15_1537 TPM= 1.93 Transcript Type= NA
chr15	63674747	63833969	63674747	63833969	-	transcript1542.chr15.nic@HERC1	transcript1542.chr15.nic	protein_coding	63833827,63774694,63764096,63758175,63756437,63755229,63754505,63752958,63749647,63749367,63747724,63746918,63734724,63732924,63729497,63729236,63727647,63725292,63723182,63718783,63718574,63716302,63713353,63712775,63706780,63698728,63696124,63694774,63694312,63693964,63692411,63690541,63689589,63686359,63680537,63680077,63677845,63674747	63833969,63775649,63764191,63758369,63756748,63755325,63754648,63753085,63749791,63749538,63747858,63747083,63734849,63733145,63729649,63729368,63727838,63725513,63723355,63718897,63718694,63716473,63713665,63712895,63706831,63698996,63696339,63694894,63694549,63694157,63692566,63690647,63689699,63686535,63680776,63680160,63678365,63675117	Gene ID= ENSG00000103657.13 TPM= 9.65 Transcript Type= NA
chr15	63907923	64046510	63907923	64046510	-	transcript1555.chr15.nnic@DAPK2	transcript1555.chr15.nnic	protein_coding	64046298,64040170,63983533,63971423,63939232,63930407,63929551,63925941,63924816,63922701,63912108,63911908,63907923	64046510,64040267,63983754,63971561,63939361,63930455,63929577,63926093,63924861,63923343,63912197,63911991,63908600	Gene ID= ENSG00000035664.11 TPM= 7.24 Transcript Type= NA
chr15	63907923	64046448	63907923	64046448	-	transcript1570.chr15.nic@DAPK2	transcript1570.chr15.nic	protein_coding	64046298,64040170,63983533,63971423,63939232,63930407,63929551,63925941,63924816,63912108,63911908,63907923	64046448,64040267,63983754,63971561,63939361,63930455,63929577,63926093,63924861,63912197,63911991,63911216	Gene ID= ENSG00000035664.11 TPM= 3.86 Transcript Type= NA
chr15	63916147	64046322	63916147	64046322	-	ENST00000612884.4@DAPK2	ENST00000612884.4	protein_coding	64046298,64040170,63983533,63971423,63939232,63930407,63929551,63925941,63924816,63916147	64046322,64040267,63983754,63971561,63939361,63930455,63929577,63926093,63924861,63923343	Gene ID= ENSG00000035664.11 TPM= 8.69 Transcript Type= protein_coding
chr15	64072559	64094018	64072559	64094018	-	ENST00000300030.7@FAM96A	ENST00000300030.7	protein_coding	64093645,64088687,64081102,64075492,64072559	64094018,64088851,64081151,64075537,64073028	Gene ID= ENSG00000166797.10 TPM= 45.37 Transcript Type= protein_coding
chr15	64072578	64093808	64072578	64093808	-	ENST00000380290.7@FAM96A	ENST00000380290.7	protein_coding	64093645,64088687,64075492,64072578	64093808,64088851,64075537,64073028	Gene ID= ENSG00000166797.10 TPM= 2.9 Transcript Type= protein_coding
chr15	64096000	64138006	64096000	64138006	+	ENST00000559844.5@SNX1	ENST00000559844.5	protein_coding	64096000,64112573,64118117,64118788,64123503,64126079,64127174,64127731,64129916,64130228,64131687,64134664,64136330,64136861,64137568	64096172,64112684,64118244,64118854,64123546,64126220,64127252,64127806,64130029,64130321,64131892,64134807,64136410,64136932,64138006	Gene ID= ENSG00000028528.14 TPM= 95.57 Transcript Type= protein_coding
chr15	64095993	64139875	64095993	64139875	+	ENST00000261889.9@SNX1	ENST00000261889.9	protein_coding	64095993,64112573,64118117,64118788,64123503,64126079,64127174,64127731,64129916,64130228,64131687,64134664,64136330,64136861,64138042	64096172,64112684,64118244,64118854,64123546,64126220,64127252,64127806,64130029,64130321,64131892,64134807,64136410,64136932,64139875	Gene ID= ENSG00000028528.14 TPM= 2.9 Transcript Type= protein_coding
chr15	64155812	64163205	64155812	64163205	-	ENST00000300026.3@PPIB	ENST00000300026.3	protein_coding	64162852,64162041,64160104,64156725,64155812	64163205,64162154,64160197,64156909,64156145	Gene ID= ENSG00000166794.4 TPM= 80.12 Transcript Type= protein_coding
chr15	64165731	64169533	64165731	64169533	-	transcript1609.chr15.nnic@NA	transcript1609.chr15.nnic	NA	64165731	64169533	Gene ID= novel_gene_chr15_1610 TPM= 2.9 Transcript Type= NA
chr15	64165517	64356259	64165517	64356259	-	ENST00000303052.12@CSNK1G1	ENST00000303052.12	protein_coding	64355988,64300319,64259201,64251512,64216562,64213890,64207509,64204865,64204441,64203082,64180348,64165517	64356259,64300723,64259241,64251581,64216713,64214124,64207594,64204949,64204589,64203189,64180454,64171985	Gene ID= ENSG00000169118.17 TPM= 1.93 Transcript Type= protein_coding
chr15	64387804	64455303	64387804	64455303	+	ENST00000261884.7@TRIP4	ENST00000261884.7	protein_coding	64387804,64393946,64395398,64397606,64400743,64406330,64409613,64414085,64418541,64424031,64425540,64445006,64454997	64387964,64394115,64395531,64397818,64400821,64406459,64409828,64414211,64418728,64424155,64425631,64445108,64455303	Gene ID= ENSG00000103671.9 TPM= 14.48 Transcript Type= protein_coding
chr15	64387817	64455303	64387817	64455303	+	transcript1616.chr15.nnic@TRIP4	transcript1616.chr15.nnic	protein_coding	64387817,64393946,64395398,64397606,64400743,64406330,64409613,64414085,64418541,64424031,64425540,64445006,64454997	64387964,64394115,64395531,64397818,64400821,64406459,64409828,64414178,64418728,64424155,64425631,64445108,64455303	Gene ID= ENSG00000103671.9 TPM= 1.93 Transcript Type= NA
chr15	64387817	64424330	64387817	64424330	+	transcript1619.chr15.nic@TRIP4	transcript1619.chr15.nic	protein_coding	64387817,64393946,64395398,64397606,64400743,64406330,64409613,64414085,64418541,64424031	64387964,64394115,64395531,64397818,64400821,64406459,64409828,64414211,64418728,64424330	Gene ID= ENSG00000103671.9 TPM= 3.86 Transcript Type= NA
chr15	64460579	64675040	64460579	64675040	+	transcript1620.chr15.nic@ZNF609	transcript1620.chr15.nic	protein_coding	64460579,64499293,64622827,64670346,64673916	64460838,64500166,64623052,64670433,64675040	Gene ID= ENSG00000180357.9 TPM= 6.76 Transcript Type= NA
chr15	64687573	64703281	64687573	64703281	-	ENST00000326005.10@OAZ2	ENST00000326005.10	protein_coding	64703029,64691516,64691434,64690374,64689084,64687573	64703281,64691591,64691514,64690549,64689169,64688834	Gene ID= ENSG00000180304.14 TPM= 160.72 Transcript Type= protein_coding
chr15	64739898	64775587	64739898	64775587	-	ENST00000300069.4@RBPMS2	ENST00000300069.4	protein_coding	64775233,64751561,64750343,64749431,64749000,64748419,64741173,64739898	64775587,64751638,64750381,64749493,64749150,64748567,64741242,64741000	Gene ID= ENSG00000166831.8 TPM= 3.86 Transcript Type= protein_coding
chr15	64841889	64868007	64841889	64868007	+	ENST00000323544.4@PLEKHO2	ENST00000323544.4	protein_coding	64841889,64848593,64854921,64859894,64861477,64864899	64842028,64848742,64855037,64859998,64861575,64868007	Gene ID= ENSG00000241839.9 TPM= 6.76 Transcript Type= protein_coding
chr15	64963027	64989474	64963027	64989474	-	ENST00000433215.6@SPG21	ENST00000433215.6	protein_coding	64989406,64983507,64980864,64976475,64974602,64970114,64969255,64965320,64963027	64989474,64983593,64981025,64976555,64974747,64970222,64969362,64965460,64963736	Gene ID= ENSG00000090487.10 TPM= 2.09 Transcript Type= protein_coding
chr15	64963021	64989936	64963021	64989936	-	ENST00000204566.6@SPG21	ENST00000204566.6	protein_coding	64989665,64983507,64980864,64976475,64974602,64970114,64969255,64965320,64963021	64989936,64983593,64981025,64976555,64974747,64970222,64969362,64965460,64963736	Gene ID= ENSG00000090487.10 TPM= 87.68 Transcript Type= protein_coding
chr15	64963027	64989917	64963027	64989917	-	transcript1639.chr15.nic@SPG21	transcript1639.chr15.nic	protein_coding	64989665,64980864,64976475,64974602,64970114,64969255,64965320,64963027	64989917,64981025,64976555,64974747,64970222,64969362,64965460,64963736	Gene ID= ENSG00000090487.10 TPM= 7.56 Transcript Type= NA
chr15	65053337	65068112	65053337	65068112	-	ENST00000220062.8@RASL12	ENST00000220062.8	protein_coding	65067733,65065217,65059345,65058427,65053337	65068112,65065273,65059418,65058617,65055274	Gene ID= ENSG00000103710.10 TPM= 6.76 Transcript Type= protein_coding
chr15	65076728	65079946	65076728	65079946	+	transcript1655.chr15.nnic@NA	transcript1655.chr15.nnic	NA	65076728	65079946	Gene ID= novel_gene_chr15_1656 TPM= 17.38 Transcript Type= NA
chr15	65119773	65133853	65119773	65133853	-	transcript1662.chr15.nic@PDCD7	transcript1662.chr15.nic	protein_coding	65132912,65129032,65119773	65133853,65129170,65119954	Gene ID= ENSG00000090470.14 TPM= 23.17 Transcript Type= NA
chr15	65117379	65133836	65117379	65133836	-	ENST00000204549.8@PDCD7	ENST00000204549.8	protein_coding	65132912,65129032,65119718,65119376,65117379	65133836,65129170,65119954,65119463,65118840	Gene ID= ENSG00000090470.14 TPM= 8.69 Transcript Type= protein_coding
chr15	65148219	65185342	65148219	65185342	-	ENST00000300107.7@CLPX	ENST00000300107.7	protein_coding	65185075,65180044,65178934,65166631,65164029,65162604,65158575,65157746,65156844,65155692,65154782,65153547,65152430,65148219	65185342,65180204,65179051,65166785,65164188,65162645,65158751,65157910,65156932,65155856,65155081,65153639,65152536,65150913	Gene ID= ENSG00000166855.9 TPM= 9.65 Transcript Type= protein_coding
chr15	65258096	65286915	65258096	65286915	-	transcript1681.chr15.nic@PARP16	transcript1681.chr15.nic	protein_coding	65286253,65270935,65266562,65263149,65260885,65258096	65286915,65271072,65266768,65263320,65261026,65259542	Gene ID= ENSG00000138617.14 TPM= 9.65 Transcript Type= NA
chr15	65258094	65286872	65258094	65286872	-	ENST00000261888.10@PARP16	ENST00000261888.10	protein_coding	65286253,65270935,65266562,65263149,65260885,65258094	65286872,65271072,65266768,65263320,65261026,65259545	Gene ID= ENSG00000138617.14 TPM= 9.65 Transcript Type= protein_coding
chr15	65446617	65517682	65446617	65517682	-	transcript1687.chr15.nic@DPP8	transcript1687.chr15.nic	protein_coding	65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65455654,65454263,65451960,65450999,65446617	65517682,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65455841,65454415,65452102,65451110,65447006	Gene ID= ENSG00000074603.18 TPM= 1.93 Transcript Type= NA
chr15	65446617	65517689	65446617	65517689	-	transcript1691.chr15.nic@DPP8	transcript1691.chr15.nic	protein_coding	65517486,65512295,65507243,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65454263,65451960,65450999,65446617	65517689,65512564,65507355,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65454415,65452102,65451110,65447006	Gene ID= ENSG00000074603.18 TPM= 1.93 Transcript Type= NA
chr15	65446617	65517690	65446617	65517690	-	transcript1692.chr15.nnic@DPP8	transcript1692.chr15.nnic	protein_coding	65517486,65512295,65507243,65500606,65497864,65490189,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65454263,65451960,65450999,65446617	65517690,65512564,65507355,65500779,65498032,65490299,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65454415,65452102,65451110,65447006	Gene ID= ENSG00000074603.18 TPM= 2.9 Transcript Type= NA
chr15	65446617	65517744	65446617	65517744	-	transcript1693.chr15.nic@DPP8	transcript1693.chr15.nic	protein_coding	65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65451960,65450999,65446617	65517744,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65452102,65451110,65447006	Gene ID= ENSG00000074603.18 TPM= 5.79 Transcript Type= NA
chr15	65446619	65517699	65446619	65517699	-	ENST00000300141.10@DPP8	ENST00000300141.10	protein_coding	65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65454263,65451960,65450999,65446619	65517699,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65454415,65452102,65451110,65447006	Gene ID= ENSG00000074603.18 TPM= 22.2 Transcript Type= protein_coding
chr15	65446617	65517680	65446617	65517680	-	ENST00000358939.8@DPP8	ENST00000358939.8	protein_coding	65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65451960,65450999,65446617	65517680,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65452102,65451110,65447006	Gene ID= ENSG00000074603.18 TPM= 1.93 Transcript Type= protein_coding
chr15	65530466	65578352	65530466	65578352	+	ENST00000261875.9@HACD3	ENST00000261875.9	protein_coding	65530466,65551676,65554887,65556739,65558680,65562774,65564215,65570091,65571548,65572235,65576303	65530718,65551718,65554960,65556903,65558731,65562884,65564342,65570203,65571654,65572366,65578352	Gene ID= ENSG00000074696.12 TPM= 7.72 Transcript Type= protein_coding
chr15	65578782	65611245	65578782	65611245	-	ENST00000313182.6@INTS14	ENST00000313182.6	protein_coding	65611098,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578782	65611245,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 12.87 Transcript Type= protein_coding
chr15	65578782	65611122	65578782	65611122	-	transcript1712.chr15.nic@INTS14	transcript1712.chr15.nic	protein_coding	65610686,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578782	65611122,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 3.21 Transcript Type= NA
chr15	65578753	65611136	65578753	65611136	-	ENST00000573314.5@INTS14	ENST00000573314.5	protein_coding	65610796,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578753	65611136,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 9.01 Transcript Type= nonsense_mediated_decay
chr15	65578782	65611129	65578782	65611129	-	transcript1719.chr15.nnic@INTS14	transcript1719.chr15.nnic	protein_coding	65611098,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65584770,65581954,65578782	65611129,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 3.86 Transcript Type= NA
chr15	65869458	65891991	65869458	65891991	+	ENST00000261890.6@RAB11A	ENST00000261890.6	protein_coding	65869458,65877332,65877762,65879671,65887701	65869625,65877527,65877955,65879751,65891991	Gene ID= ENSG00000103769.9 TPM= 6.76 Transcript Type= protein_coding
chr15	66293787	66333898	66293787	66333898	+	transcript1736.chr15.nic@DIS3L	transcript1736.chr15.nic	protein_coding	66293787,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66294174,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333898	Gene ID= ENSG00000166938.12 TPM= 7.72 Transcript Type= NA
chr15	66293820	66333898	66293820	66333898	+	transcript1739.chr15.nic@DIS3L	transcript1739.chr15.nic	protein_coding	66293820,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66294448,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333898	Gene ID= ENSG00000166938.12 TPM= 3.86 Transcript Type= NA
chr15	66293576	66333744	66293576	66333744	+	transcript1742.chr15.nnic@DIS3L	transcript1742.chr15.nnic	protein_coding	66293576,66294988,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66293735,66295141,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333744	Gene ID= ENSG00000166938.12 TPM= 2.9 Transcript Type= NA
chr15	66293547	66333744	66293547	66333744	+	ENST00000319212.8@DIS3L	ENST00000319212.8	protein_coding	66293547,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66293735,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333744	Gene ID= ENSG00000166938.12 TPM= 26.06 Transcript Type= protein_coding
chr15	66378732	66386746	66378732	66386746	-	transcript1771.chr15.nnic@TIPIN	transcript1771.chr15.nnic	protein_coding	66386607,66378732	66386746,66379940	Gene ID= ENSG00000075131.9 TPM= 1.93 Transcript Type= NA
chr15	66386817	66492312	66386817	66492312	+	ENST00000307102.9@MAP2K1	ENST00000307102.9	protein_coding	66386817,66435027,66436746,66443280,66444656,66481755,66484990,66487228,66489215,66489718,66490502	66387427,66435237,66436892,66443357,66444707,66481879,66485191,66487292,66489276,66489763,66492312	Gene ID= ENSG00000169032.9 TPM= 93.64 Transcript Type= protein_coding
chr15	66386908	66491532	66386908	66491532	+	transcript1751.chr15.nnic@MAP2K1	transcript1751.chr15.nnic	protein_coding	66386908,66435027,66436746,66444656,66481755,66484990,66487228,66489215,66489718,66490502	66387427,66435237,66436892,66444707,66481879,66485191,66487292,66489276,66489763,66491532	Gene ID= ENSG00000169032.9 TPM= 5.79 Transcript Type= NA
chr15	66493813	66497813	66493813	66497813	-	ENST00000316634.5@SNAPC5	ENST00000316634.5	protein_coding	66497642,66495330,66493813	66497813,66495419,66494552	Gene ID= ENSG00000174446.12 TPM= 48.75 Transcript Type= protein_coding
chr15	66493844	66497759	66493844	66497759	-	ENST00000565465.1@SNAPC5	ENST00000565465.1	protein_coding	66497490,66495330,66493844	66497759,66495419,66494552	Gene ID= ENSG00000174446.12 TPM= 3.38 Transcript Type= nonsense_mediated_decay
chr15	66498015	66504883	66498015	66504883	-	ENST00000307961.10@RPL4	ENST00000307961.10	protein_coding	66504788,66503358,66503058,66502612,66501788,66501375,66500949,66500293,66500056,66498015	66504883,66503529,66503164,66502750,66501912,66501504,66501105,66500376,66500176,66499652	Gene ID= ENSG00000174444.14 TPM= 1776.17 Transcript Type= protein_coding
chr15	66499346	66504827	66499346	66504827	-	ENST00000561775.5@RPL4	ENST00000561775.5	protein_coding	66504788,66503358,66502612,66501788,66501375,66500949,66500293,66500056,66499346	66504827,66503529,66502871,66501912,66501504,66501105,66500376,66500176,66499652	Gene ID= ENSG00000174444.14 TPM= 2.9 Transcript Type= retained_intron
chr15	66504959	66550128	66504959	66550128	+	ENST00000307897.9@ZWILCH	ENST00000307897.9	protein_coding	66504959,66508841,66513988,66515526,66518879,66520590,66521050,66523677,66527290,66527857,66528852,66529494,66532247,66532985,66535933,66537168,66540098,66546591,66548351	66505391,66508892,66514083,66515644,66519078,66520660,66521205,66523748,66527383,66527912,66528957,66529573,66532403,66533013,66536069,66537263,66540210,66546705,66550128	Gene ID= ENSG00000174442.11 TPM= 2.9 Transcript Type= protein_coding
chr15	66505117	66549487	66505117	66549487	+	ENST00000446801.6@ZWILCH	ENST00000446801.6	protein_coding	66505117,66508746,66513988,66515526,66518879,66520590,66521050,66523677,66527290,66527857,66528852,66529494,66532247,66532985,66535933,66537168,66540098,66546591,66548351	66505391,66508892,66514083,66515644,66519078,66520660,66521205,66523748,66527383,66527912,66528957,66529573,66532403,66533013,66536069,66537263,66540210,66546705,66549487	Gene ID= ENSG00000174442.11 TPM= 2.9 Transcript Type= protein_coding
chr15	67065845	67195195	67065845	67195195	+	ENST00000327367.8@SMAD3	ENST00000327367.8	protein_coding	67065845,67164895,67165253,67166779,67170554,67181241,67184727,67187365,67190413	67066360,67165088,67165384,67166853,67170604,67181453,67184864,67187509,67195195	Gene ID= ENSG00000166949.15 TPM= 20.27 Transcript Type= protein_coding
chr15	67177424	67181481	67177424	67181481	-	transcript1781.chr15.nnic@NA	transcript1781.chr15.nnic	NA	67177424	67181481	Gene ID= novel_gene_chr15_1782 TPM= 8.69 Transcript Type= NA
chr15	67201033	67254736	67201033	67254736	-	ENST00000261880.9@AAGAB	ENST00000261880.9	protein_coding	67254559,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201033	67254736,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898	Gene ID= ENSG00000103591.12 TPM= 8.37 Transcript Type= protein_coding
chr15	67201673	67254653	67201673	67254653	-	transcript1786.chr15.nnic@AAGAB	transcript1786.chr15.nnic	protein_coding	67254224,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201673	67254653,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898	Gene ID= ENSG00000103591.12 TPM= 5.47 Transcript Type= NA
chr15	67201707	67254675	67201707	67254675	-	ENST00000561452.5@AAGAB	ENST00000561452.5	protein_coding	67254414,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201707	67254675,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898	Gene ID= ENSG00000103591.12 TPM= 7.4 Transcript Type= protein_coding
chr15	67254798	67501803	67254798	67501803	+	transcript1798.chr15.nnic@IQCH	transcript1798.chr15.nnic	protein_coding	67254798,67261272,67344063,67357345,67359847,67372111,67373367,67384936,67388831,67400114,67416931,67421291,67475696,67490003,67494258,67500633	67254947,67261394,67344191,67357421,67359885,67372662,67373433,67385019,67389006,67400305,67417051,67421577,67475818,67490064,67494366,67501803	Gene ID= ENSG00000103599.19 TPM= 1.93 Transcript Type= NA
chr15	67521068	67530143	67521068	67530143	+	ENST00000342683.5@C15orf61	ENST00000342683.5	protein_coding	67521068,67526418	67521594,67530143	Gene ID= ENSG00000189227.5 TPM= 2.9 Transcript Type= protein_coding
chr15	67521196	67523229	67521196	67523229	+	transcript1808.chr15.nnic@NA	transcript1808.chr15.nnic	NA	67521196	67523229	Gene ID= novel_gene_chr15_1809 TPM= 4.83 Transcript Type= NA
chr15	67542709	67807123	67542709	67807123	+	ENST00000178640.9@MAP2K5	ENST00000178640.9	protein_coding	67542709,67550034,67563283,67580754,67585890,67586846,67592926,67600685,67630888,67646231,67646388,67658553,67664597,67692479,67693518,67703337,67727916,67748231,67748569,67769602,67772707,67806646	67543470,67550082,67563350,67580823,67585930,67586913,67592974,67600749,67630927,67646299,67646469,67658614,67664645,67692552,67693568,67703408,67727945,67748257,67748601,67769663,67772752,67807123	Gene ID= ENSG00000137764.19 TPM= 13.51 Transcript Type= protein_coding
chr15	68054179	68193846	68054179	68193846	+	ENST00000249636.10@PIAS1	ENST00000249636.10	protein_coding	68054179,68086306,68141946,68142290,68145816,68146566,68153590,68164731,68173732,68175637,68176474,68181212,68183630,68187542	68054350,68086750,68142030,68142337,68145906,68146700,68153695,68164804,68173892,68175767,68176654,68181354,68183667,68193846	Gene ID= ENSG00000033800.13 TPM= 3.86 Transcript Type= protein_coding
chr15	68206992	68229743	68206992	68229743	-	ENST00000249806.10@CLN6	ENST00000249806.10	protein_coding	68229502,68218536,68214290,68211675,68211263,68209637,68206992	68229743,68218650,68214388,68211863,68211318,68209759,68208410	Gene ID= ENSG00000128973.12 TPM= 13.51 Transcript Type= protein_coding
chr15	68207030	68229742	68207030	68229742	-	ENST00000638076.1@CLN6	ENST00000638076.1	protein_coding	68229502,68218536,68214290,68211556,68211263,68209637,68207030	68229742,68218650,68214388,68211863,68211318,68209759,68208410	Gene ID= ENSG00000128973.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr15	68277803	68295865	68277803	68295865	+	ENST00000306917.4@FEM1B	ENST00000306917.4	protein_coding	68277803,68289607	68278665,68295865	Gene ID= ENSG00000169018.5 TPM= 6.76 Transcript Type= protein_coding
chr15	68778535	68820895	68778535	68820895	-	ENST00000465139.6@ANP32A	ENST00000465139.6	protein_coding	68820698,68787770,68787413,68784397,68782956,68780410,68778535	68820895,68787919,68787535,68784595,68783053,68780473,68780142	Gene ID= ENSG00000140350.15 TPM= 6.76 Transcript Type= protein_coding
chr15	68818219	68818427	68818219	68818427	+	transcript1850.chr15.nnic@NA	transcript1850.chr15.nnic	NA	68818219	68818427	Gene ID= novel_gene_chr15_1851 TPM= 1.93 Transcript Type= NA
chr15	68930500	68946811	68930500	68946811	+	ENST00000310673.3@SPESP1	ENST00000310673.3	protein_coding	68930500,68945599	68930717,68946811	Gene ID= ENSG00000258484.3 TPM= 3.86 Transcript Type= protein_coding
chr15	69160634	69272199	69160634	69272199	+	ENST00000261858.6@GLCE	ENST00000261858.6	protein_coding	69160634,69210316,69255794,69261087,69268220	69160757,69210406,69256392,69261329,69272199	Gene ID= ENSG00000138604.9 TPM= 2.9 Transcript Type= protein_coding
chr15	69452814	69455547	69452814	69455547	+	ENST00000357790.5@RPLP1	ENST00000357790.5	protein_coding	69452814,69455170,69455428	69453020,69455287,69455547	Gene ID= ENSG00000137818.11 TPM= 59.02 Transcript Type= protein_coding
chr15	69452819	69455546	69452819	69455546	+	ENST00000487304.6@RPLP1	ENST00000487304.6	protein_coding	69452819,69453647,69455428	69453020,69455287,69455546	Gene ID= ENSG00000137818.11 TPM= 42.07 Transcript Type= retained_intron
chr15	69453019	69455546	69453019	69455546	+	ENST00000488122.2@RPLP1	ENST00000488122.2	protein_coding	69453019,69455170,69455428	69453721,69455287,69455546	Gene ID= ENSG00000137818.11 TPM= 49.12 Transcript Type= retained_intron
chr15	70048869	70097571	70048869	70097571	-	ENST00000557919.5@TLE3	ENST00000557919.5	protein_coding	70096775,70096161,70095578,70094532,70076096,70074533,70066014,70064454,70060530,70059410,70058663,70058159,70057474,70056298,70055049,70054438,70053227,70052374,70051391,70048869	70097571,70096261,70095641,70094576,70076158,70074607,70066218,70064470,70060649,70059460,70058815,70058291,70057658,70056374,70055296,70054685,70053374,70052524,70051467,70050204	Gene ID= ENSG00000140332.15 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr15	70654554	70763593	70654554	70763593	-	ENST00000322954.10@UACA	ENST00000322954.10	protein_coding	70763330,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70677108,70676493,70671965,70671039,70666724,70664662,70660151,70654554	70763593,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70677140,70676591,70672001,70671091,70669462,70664814,70660216,70657127	Gene ID= ENSG00000137831.14 TPM= 6.95 Transcript Type= protein_coding
chr15	70656802	70702308	70656802	70702308	-	ENST00000379983.6@UACA	ENST00000379983.6	protein_coding	70701877,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70677108,70676493,70671965,70671039,70666724,70664662,70660151,70656802	70702308,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70677140,70676591,70672001,70671091,70669462,70664814,70660216,70657127	Gene ID= ENSG00000137831.14 TPM= 3.21 Transcript Type= protein_coding
chr15	70656932	70702308	70656932	70702308	-	ENST00000560441.5@UACA	ENST00000560441.5	protein_coding	70701877,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70677108,70676493,70671971,70671039,70666724,70664662,70660151,70656932	70702308,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70677140,70676591,70672001,70671091,70669462,70664814,70660216,70657127	Gene ID= ENSG00000137831.14 TPM= 4.18 Transcript Type= protein_coding
chr15	70668918	70702281	70668918	70702281	-	ENST00000558758.5@UACA	ENST00000558758.5	protein_coding	70701877,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70676493,70671965,70671039,70668918	70702281,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70676591,70672001,70671091,70669462	Gene ID= ENSG00000137831.14 TPM= 1.93 Transcript Type= protein_coding
chr15	70851427	70854121	70851427	70854121	-	ENST00000344870.4@LARP6	ENST00000344870.4	protein_coding	70853889,70851427	70854121,70851720	Gene ID= ENSG00000166173.10 TPM= 1.93 Transcript Type= protein_coding
chr15	70881342	70892785	70881342	70892785	-	ENST00000249861.8@THAP10	ENST00000249861.8	protein_coding	70891844,70882761,70881342	70892785,70882908,70882650	Gene ID= ENSG00000129028.8 TPM= 2.9 Transcript Type= protein_coding
chr15	71096952	71783383	71096952	71783383	+	ENST00000355327.7@THSD4	ENST00000355327.7	protein_coding	71096952,71141449,71154863,71215035,71242649,71256613,71411687,71660530,71728549,71731121,71737732,71745106,71746838,71748421,71757902,71765020,71771064,71777232	71097006,71141556,71154932,71215399,71243096,71256715,71411823,71660734,71728724,71731217,71738007,71745235,71747042,71748594,71758075,71765199,71771208,71783383	Gene ID= ENSG00000187720.14 TPM= 1.93 Transcript Type= protein_coding
chr15	71951047	72118209	71951047	72118209	-	transcript1940.chr15.nic@MYO9A	transcript1940.chr15.nic	protein_coding	72118157,72045724,72032494,72027731,72020918,72010350,72007826,71999851,71994469,71991103,71978171,71967984,71959901,71951047	72118209,72046634,72032588,72027793,72021017,72010447,72007952,71999940,71994585,71991237,71978292,71968125,71960096,71951896	Gene ID= ENSG00000066933.15 TPM= 1.93 Transcript Type= NA
chr15	72118296	72143688	72118296	72143688	+	ENST00000340912.5@SENP8	ENST00000340912.5	protein_coding	72118296,72139577	72118464,72143688	Gene ID= ENSG00000166192.14 TPM= 4.83 Transcript Type= protein_coding
chr15	72199029	72231386	72199029	72231386	-	ENST00000319622.10@PKM	ENST00000319622.10	protein_coding	72230900,72218944,72217409,72210347,72209673,72208621,72207127,72206728,72203022,72200474,72199029	72231386,72219110,72217500,72210478,72209859,72208891,72207277,72206880,72203188,72200655,72199756	Gene ID= ENSG00000067225.17 TPM= 95.1 Transcript Type= protein_coding
chr15	72199032	72231206	72199032	72231206	-	ENST00000335181.9@PKM	ENST00000335181.9	protein_coding	72231116,72218944,72217409,72210347,72209673,72208621,72207127,72206728,72202454,72200474,72199032	72231206,72219110,72217500,72210478,72209859,72208891,72207277,72206880,72202620,72200655,72199756	Gene ID= ENSG00000067225.17 TPM= 150.76 Transcript Type= protein_coding
chr15	72241182	72272655	72241182	72272655	-	transcript1986.chr15.nic@PARP6	transcript1986.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72249245,72242620,72242157,72241901,72241182	72272655,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72249314,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 3.34 Transcript Type= NA
chr15	72241182	72272655	72241182	72272655	-	transcript1988.chr15.nic@PARP6	transcript1988.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253950,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241182	72272655,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72254070,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 3.34 Transcript Type= NA
chr15	72241182	72272554	72241182	72272554	-	transcript1989.chr15.nic@PARP6	transcript1989.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265270,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250020,72249245,72242620,72242157,72241901,72241182	72272554,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250092,72249314,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 2.05 Transcript Type= NA
chr15	72241182	72272572	72241182	72272572	-	transcript1998.chr15.nic@PARP6	transcript1998.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241182	72272572,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 19.75 Transcript Type= NA
chr15	72241182	72272655	72241182	72272655	-	transcript2001.chr15.nic@PARP6	transcript2001.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241182	72272655,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 20.07 Transcript Type= NA
chr15	72241182	72272579	72241182	72272579	-	transcript2002.chr15.nnic@PARP6	transcript2002.chr15.nnic	protein_coding	72272503,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241182	72272579,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 7.2 Transcript Type= NA
chr15	72241182	72272571	72241182	72272571	-	transcript2005.chr15.nnic@PARP6	transcript2005.chr15.nnic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241182	72272571,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 2.05 Transcript Type= NA
chr15	72241182	72272554	72241182	72272554	-	transcript2007.chr15.nic@PARP6	transcript2007.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250020,72242620,72242157,72241901,72241182	72272554,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 3.01 Transcript Type= NA
chr15	72340919	72376476	72340919	72376476	-	ENST00000268097.9@HEXA	ENST00000268097.9	protein_coding	72375720,72356525,72355559,72353691,72353068,72351133,72350518,72349079,72348048,72347686,72346527,72346235,72345446,72340919	72376476,72356617,72355624,72353737,72353178,72351234,72350650,72349259,72348134,72347758,72346710,72346325,72345550,72344140	Gene ID= ENSG00000213614.9 TPM= 12.55 Transcript Type= protein_coding
chr15	72343857	72376027	72343857	72376027	-	transcript2018.chr15.nic@HEXA	transcript2018.chr15.nic	protein_coding	72375720,72356525,72355559,72353068,72351133,72350518,72349079,72348048,72347686,72346527,72345677,72345446,72343857	72376027,72356617,72355624,72353178,72351234,72350650,72349259,72348134,72347758,72346710,72346325,72345550,72344140	Gene ID= ENSG00000213614.9 TPM= 2.9 Transcript Type= NA
chr15	72472844	72475168	72472844	72475168	-	ENST00000565181.1@TMEM202-AS1	ENST00000565181.1	lincRNA	72472844	72475168	Gene ID= ENSG00000261423.1 TPM= 1.93 Transcript Type= lincRNA
chr15	72474366	72584006	72474366	72584006	+	transcript2027.chr15.nic@ARIH1	transcript2027.chr15.nic	protein_coding	72474366,72496791,72518067,72544820,72555271,72555852,72561483,72563394,72566563,72567106,72570177,72572108,72580731,72582075,72583208	72475014,72496858,72518134,72544964,72555363,72555907,72561549,72563500,72566605,72567177,72570307,72572165,72580991,72582187,72584006	Gene ID= ENSG00000166233.14 TPM= 2.41 Transcript Type= NA
chr15	72474311	72584006	72474311	72584006	+	transcript2031.chr15.nnic@ARIH1	transcript2031.chr15.nnic	protein_coding	72474311,72518067,72544820,72555271,72555852,72561483,72563394,72566563,72567106,72570177,72572108,72582075,72583208	72475014,72518134,72544964,72555363,72555907,72561549,72563500,72566605,72567177,72570307,72572165,72582187,72584006	Gene ID= ENSG00000166233.14 TPM= 3.38 Transcript Type= NA
chr15	72686187	72738476	72686187	72738476	+	ENST00000268057.8@BBS4	ENST00000268057.8	protein_coding	72686187,72695177,72709700,72712244,72715291,72716778,72722794,72724528,72727940,72729616,72731305,72731555,72735113,72735825,72736762,72737478	72686251,72695228,72709779,72712307,72715402,72716850,72722847,72724655,72727994,72729684,72731457,72731726,72735182,72735966,72736963,72738476	Gene ID= ENSG00000140463.13 TPM= 13.51 Transcript Type= protein_coding
chr15	72751369	72783785	72751369	72783785	-	ENST00000311669.12@ADPGK	ENST00000311669.12	protein_coding	72783459,72774872,72771783,72760407,72756251,72755556,72751369	72783785,72775097,72771845,72760527,72756447,72755654,72752892	Gene ID= ENSG00000159322.17 TPM= 12.87 Transcript Type= protein_coding
chr15	72751369	72783776	72751369	72783776	-	ENST00000569534.5@ADPGK	ENST00000569534.5	protein_coding	72783459,72760407,72756251,72755556,72751369	72783776,72760527,72756447,72755654,72752895	Gene ID= ENSG00000159322.17 TPM= 2.25 Transcript Type= nonsense_mediated_decay
chr15	72757202	72783774	72757202	72783774	-	transcript2058.chr15.nic@ADPGK	transcript2058.chr15.nic	protein_coding	72783459,72774872,72771783,72757202	72783774,72775097,72771845,72760527	Gene ID= ENSG00000159322.17 TPM= 3.38 Transcript Type= NA
chr15	72757202	72783760	72757202	72783760	-	transcript2060.chr15.nnic@ADPGK	transcript2060.chr15.nnic	protein_coding	72783459,72771783,72757202	72783760,72771845,72760527	Gene ID= ENSG00000159322.17 TPM= 2.41 Transcript Type= NA
chr15	72751369	72783731	72751369	72783731	-	ENST00000567941.5@ADPGK	ENST00000567941.5	protein_coding	72783246,72774872,72771783,72760407,72756251,72755556,72751369	72783731,72775097,72771845,72760527,72756447,72755654,72752892	Gene ID= ENSG00000159322.17 TPM= 1.28 Transcript Type= nonsense_mediated_decay
chr15	73560014	73633427	73560014	73633427	-	transcript2064.chr15.nnic@NPTN	transcript2064.chr15.nnic	protein_coding	73633125,73591966,73587524,73573662,73570150,73569714,73563236,73561896,73560014	73633427,73592137,73587618,73573795,73570423,73569806,73563245,73561970,73561048	Gene ID= ENSG00000156642.16 TPM= 5.79 Transcript Type= NA
chr15	73560014	73633367	73560014	73633367	-	transcript2065.chr15.nnic@NPTN	transcript2065.chr15.nnic	protein_coding	73633125,73591966,73587524,73573662,73570150,73563379,73563236,73561896,73560014	73633367,73592137,73587618,73573795,73570423,73563583,73563257,73561970,73561048	Gene ID= ENSG00000156642.16 TPM= 2.9 Transcript Type= NA
chr15	73560014	73634134	73560014	73634134	-	ENST00000351217.10@NPTN	ENST00000351217.10	protein_coding	73633125,73591966,73587524,73573662,73570150,73563236,73561896,73560014	73634134,73592137,73587618,73573795,73570423,73563257,73561970,73561048	Gene ID= ENSG00000156642.16 TPM= 46.33 Transcript Type= protein_coding
chr15	73684383	73714514	73684383	73714514	+	transcript2075.chr15.nnic@CD276	transcript2075.chr15.nnic	protein_coding	73684383,73699586,73702255,73702772,73703659,73704176,73708339,73709648,73711135,73713842	73684460,73699718,73702593,73703086,73703997,73704472,73708473,73709689,73711170,73714514	Gene ID= ENSG00000103855.17 TPM= 1.93 Transcript Type= NA
chr15	73684213	73714518	73684213	73714518	+	ENST00000318443.9@CD276	ENST00000318443.9	protein_coding	73684213,73699586,73702255,73702772,73703659,73704176,73708339,73709648,73711135,73712934	73684460,73699718,73702593,73703086,73703997,73704472,73708473,73709689,73711170,73714518	Gene ID= ENSG00000103855.17 TPM= 6.76 Transcript Type= protein_coding
chr15	73711132	73714514	73711132	73714514	+	ENST00000559465.1@CD276	ENST00000559465.1	protein_coding	73711132,73712934	73711170,73714514	Gene ID= ENSG00000103855.17 TPM= 2.9 Transcript Type= retained_intron
chr15	73926458	73952137	73926458	73952137	+	ENST00000261921.7@LOXL1	ENST00000261921.7	protein_coding	73926458,73942854,73946417,73947067,73947807,73949459,73951831	73927885,73942962,73946554,73947223,73947902,73949574,73952137	Gene ID= ENSG00000129038.15 TPM= 11.58 Transcript Type= protein_coding
chr15	73983218	73992242	73983218	73992242	-	transcript2085.chr15.nic@STOML1	transcript2085.chr15.nic	protein_coding	73992091,73990351,73989030,73988599,73985318,73984659,73983218	73992242,73990457,73989257,73988802,73985513,73984871,73984130	Gene ID= ENSG00000067221.13 TPM= 2.25 Transcript Type= NA
chr15	73978923	73992348	73978923	73992348	-	ENST00000541638.5@STOML1	ENST00000541638.5	protein_coding	73992091,73990351,73989108,73988599,73985318,73984659,73978923	73992348,73990457,73989257,73988802,73985513,73984871,73984130	Gene ID= ENSG00000067221.13 TPM= 32.82 Transcript Type= protein_coding
chr15	73983218	73992327	73983218	73992327	-	transcript2087.chr15.nic@STOML1	transcript2087.chr15.nic	protein_coding	73992213,73990351,73989108,73988599,73985318,73984659,73983218	73992327,73990457,73989257,73988802,73985513,73984871,73984130	Gene ID= ENSG00000067221.13 TPM= 3.21 Transcript Type= NA
chr15	73983218	73992348	73983218	73992348	-	ENST00000316911.10@STOML1	ENST00000316911.10	protein_coding	73992091,73990351,73988599,73985318,73984659,73983218	73992348,73990457,73988802,73985513,73984871,73984130	Gene ID= ENSG00000067221.13 TPM= 8.04 Transcript Type= protein_coding
chr15	73994673	74043337	73994673	74043337	+	ENST00000395135.7@PML	ENST00000395135.7	protein_coding	73994673,73998004,74022828,74024857,74032572,74033156,74034478,74042989	73994941,73998476,74023408,74024927,74032715,74033414,74034530,74043337	Gene ID= ENSG00000140464.19 TPM= 2.9 Transcript Type= protein_coding
chr15	73994744	74043338	73994744	74043338	+	ENST00000564428.5@PML	ENST00000564428.5	protein_coding	73994744,73998004,74022828,74024857,74033156,74034478,74042989	73994941,73998476,74023408,74024927,74033414,74034530,74043338	Gene ID= ENSG00000140464.19 TPM= 1.93 Transcript Type= protein_coding
chr15	74174501	74176872	74174501	74176872	+	ENST00000395118.1@ISLR	ENST00000395118.1	protein_coding	74174501,74174851	74174653,74176872	Gene ID= ENSG00000129009.12 TPM= 3.86 Transcript Type= protein_coding
chr15	74445978	74461118	74445978	74461118	-	ENST00000564488.5@UBL7	ENST00000564488.5	protein_coding	74461037,74460668,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445978	74461118,74460778,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 6.6 Transcript Type= protein_coding
chr15	74445977	74461169	74445977	74461169	-	transcript2102.chr15.nnic@UBL7	transcript2102.chr15.nnic	protein_coding	74461108,74460668,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461169,74460778,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 6.77 Transcript Type= NA
chr15	74445977	74461180	74445977	74461180	-	transcript2104.chr15.nic@UBL7	transcript2104.chr15.nic	protein_coding	74461108,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461180,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448558,74446227	Gene ID= ENSG00000138629.15 TPM= 3.49 Transcript Type= NA
chr15	74445977	74461178	74445977	74461178	-	ENST00000395081.6@UBL7	ENST00000395081.6	protein_coding	74461037,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461178,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 34.76 Transcript Type= protein_coding
chr15	74445977	74461182	74445977	74461182	-	ENST00000361351.8@UBL7	ENST00000361351.8	protein_coding	74461108,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461182,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 49.72 Transcript Type= protein_coding
chr15	74445977	74461179	74445977	74461179	-	transcript2111.chr15.nnic@UBL7	transcript2111.chr15.nnic	protein_coding	74461158,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461179,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 9.66 Transcript Type= NA
chr15	74445977	74461102	74445977	74461102	-	ENST00000567435.5@UBL7	ENST00000567435.5	protein_coding	74460668,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461102,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 9.66 Transcript Type= protein_coding
chr15	74461299	74464573	74461299	74464573	+	transcript2120.chr15.nnic@NA	transcript2120.chr15.nnic	NA	74461299	74464573	Gene ID= novel_gene_chr15_2121 TPM= 3.86 Transcript Type= NA
chr15	74541177	74598131	74541177	74598131	+	ENST00000346246.9@ARID3B	ENST00000346246.9	protein_coding	74541177,74543860,74572862,74573132,74589820,74591151,74591560,74593138,74595611	74541330,74544488,74572933,74573204,74590003,74591434,74591814,74593236,74598131	Gene ID= ENSG00000179361.17 TPM= 9.65 Transcript Type= protein_coding
chr15	74601596	74602188	74601596	74602188	-	transcript2127.chr15.nnic@NA	transcript2127.chr15.nnic	NA	74601596	74602188	Gene ID= novel_gene_chr15_2128 TPM= 1.93 Transcript Type= NA
chr15	74614994	74630126	74614994	74630126	+	ENST00000395066.7@CLK3	ENST00000395066.7	protein_coding	74614994,74619197,74620009,74622120,74622494,74624902,74625802,74627352,74627539,74627970,74628604,74628942,74629707	74615898,74619348,74620225,74622216,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74629032,74630126	Gene ID= ENSG00000179335.18 TPM= 22.2 Transcript Type= protein_coding
chr15	74615852	74630200	74615852	74630200	+	transcript2136.chr15.nic@CLK3	transcript2136.chr15.nic	protein_coding	74615852,74619197,74619967,74622494,74624902,74625802,74627352,74627539,74627970,74628604,74628942,74629707	74615898,74619348,74620225,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74629032,74630200	Gene ID= ENSG00000179335.18 TPM= 2.41 Transcript Type= NA
chr15	74615812	74630116	74615812	74630116	+	transcript2137.chr15.nic@CLK3	transcript2137.chr15.nic	protein_coding	74615812,74619197,74620009,74622120,74622494,74624902,74625802,74627352,74627539,74627970,74628604,74628942	74615898,74619348,74620225,74622216,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74630116	Gene ID= ENSG00000179335.18 TPM= 3.86 Transcript Type= NA
chr15	74615809	74630200	74615809	74630200	+	transcript2139.chr15.nic@CLK3	transcript2139.chr15.nic	protein_coding	74615809,74619197,74620009,74622494,74624902,74625802,74627352,74627539,74627970,74628604,74628942,74629707	74615898,74619348,74620225,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74629032,74630200	Gene ID= ENSG00000179335.18 TPM= 4.34 Transcript Type= NA
chr15	74630558	74696043	74630558	74696043	-	ENST00000315127.8@EDC3	ENST00000315127.8	protein_coding	74695880,74674961,74671455,74655733,74640466,74635409,74630558	74696043,74675142,74671774,74656068,74640619,74635626,74632946	Gene ID= ENSG00000179151.11 TPM= 22.2 Transcript Type= protein_coding
chr15	74638327	74696029	74638327	74696029	-	transcript2153.chr15.nic@EDC3	transcript2153.chr15.nic	protein_coding	74695880,74687091,74674961,74671455,74655733,74638327	74696029,74687179,74675142,74671774,74656068,74640619	Gene ID= ENSG00000179151.11 TPM= 2.41 Transcript Type= NA
chr15	74638327	74696042	74638327	74696042	-	transcript2154.chr15.nic@EDC3	transcript2154.chr15.nic	protein_coding	74695880,74674961,74671455,74655733,74638327	74696042,74675142,74671774,74656068,74640619	Gene ID= ENSG00000179151.11 TPM= 3.38 Transcript Type= NA
chr15	74632542	74696000	74632542	74696000	-	ENST00000568176.5@EDC3	ENST00000568176.5	protein_coding	74695880,74687091,74674961,74671455,74655733,74640466,74635409,74632542	74696000,74687179,74675142,74671774,74656068,74640619,74635626,74632946	Gene ID= ENSG00000179151.11 TPM= 2.9 Transcript Type= protein_coding
chr15	74782057	74803198	74782057	74803198	+	ENST00000220003.13@CSK	ENST00000220003.13	protein_coding	74782057,74798233,74798615,74798826,74799272,74800412,74800681,74800823,74801012,74801522,74801695,74801997,74802331	74782720,74798312,74798728,74798938,74799491,74800505,74800746,74800922,74801102,74801595,74801890,74802083,74803198	Gene ID= ENSG00000103653.16 TPM= 17.86 Transcript Type= protein_coding
chr15	74782089	74802882	74782089	74802882	+	ENST00000439220.6@CSK	ENST00000439220.6	protein_coding	74782089,74782668,74798233,74798615,74798826,74799272,74800412,74800681,74800823,74801012,74801522,74801695,74801997,74802331	74782148,74782720,74798312,74798728,74798938,74799491,74800505,74800746,74800922,74801102,74801595,74801890,74802083,74802882	Gene ID= ENSG00000103653.16 TPM= 13.03 Transcript Type= protein_coding
chr15	74786003	74789718	74786003	74789718	-	transcript2161.chr15.nnic@NA	transcript2161.chr15.nnic	NA	74786003	74789718	Gene ID= novel_gene_chr15_2162 TPM= 7.72 Transcript Type= NA
chr15	74836118	74843171	74836118	74843171	-	transcript2163.chr15.nic@ULK3	transcript2163.chr15.nic	protein_coding	74843004,74842535,74842280,74842075,74841405,74840498,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837757,74837369,74836118	74843171,74842674,74842420,74842195,74841509,74840641,74840316,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 6.13 Transcript Type= NA
chr15	74836118	74843156	74836118	74843156	-	transcript2172.chr15.nic@ULK3	transcript2172.chr15.nic	protein_coding	74843004,74842075,74841405,74840498,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837757,74837369,74836118	74843156,74842420,74841509,74840641,74840316,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 6.13 Transcript Type= NA
chr15	74836118	74843156	74836118	74843156	-	transcript2175.chr15.nic@ULK3	transcript2175.chr15.nic	protein_coding	74843004,74842075,74841405,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837757,74837369,74836118	74843156,74842420,74841509,74840641,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 9.99 Transcript Type= NA
chr15	74836118	74843155	74836118	74843155	-	transcript2178.chr15.nnic@ULK3	transcript2178.chr15.nnic	protein_coding	74843004,74842280,74842075,74841405,74840234,74839558,74839268,74839010,74838440,74838266,74838152,74837757,74837369,74836118	74843155,74842420,74842195,74841509,74840641,74839713,74839373,74839050,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 4.87 Transcript Type= NA
chr15	74836118	74843193	74836118	74843193	-	ENST00000569437.5@ULK3	ENST00000569437.5	protein_coding	74843004,74842280,74842075,74841405,74840498,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837757,74837369,74836118	74843193,74842420,74842195,74841509,74840641,74840316,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 46.67 Transcript Type= protein_coding
chr15	74836118	74843346	74836118	74843346	-	ENST00000570276.5@ULK3	ENST00000570276.5	protein_coding	74843004,74842280,74842075,74841405,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837751,74837369,74836118	74843346,74842420,74842195,74841509,74840641,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 2.86 Transcript Type= retained_intron
chr15	74836118	74843139	74836118	74843139	-	ENST00000561725.5@ULK3	ENST00000561725.5	protein_coding	74843004,74842280,74842075,74841405,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837757,74837369,74836118	74843139,74842420,74842195,74841509,74840641,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 15.78 Transcript Type= retained_intron
chr15	74844855	74873379	74844855	74873379	-	transcript2190.chr15.nic@SCAMP2	transcript2190.chr15.nic	protein_coding	74873199,74854581,74854021,74853368,74852069,74851353,74850514,74848600,74845473,74844855	74873379,74854649,74854119,74853496,74852186,74851481,74850673,74848701,74845593,74845217	Gene ID= ENSG00000140497.16 TPM= 12.87 Transcript Type= NA
chr15	74843730	74873365	74843730	74873365	-	ENST00000268099.13@SCAMP2	ENST00000268099.13	protein_coding	74873199,74854581,74854021,74852069,74851353,74850514,74848600,74845473,74843730	74873365,74854649,74854119,74852186,74851481,74850673,74848701,74845593,74845217	Gene ID= ENSG00000140497.16 TPM= 42.79 Transcript Type= protein_coding
chr15	74844855	74873365	74844855	74873365	-	ENST00000563829.5@SCAMP2	ENST00000563829.5	protein_coding	74873199,74854581,74852069,74851353,74850514,74848600,74845473,74844855	74873365,74854649,74854119,74851481,74850673,74848701,74845593,74845217	Gene ID= ENSG00000140497.16 TPM= 7.08 Transcript Type= retained_intron
chr15	74890007	74902219	74890007	74902219	+	ENST00000352410.8@MPI	ENST00000352410.8	protein_coding	74890007,74890527,74891379,74892661,74893138,74896152,74897011,74897512	74890089,74890654,74891579,74892802,74893320,74896325,74897219,74902219	Gene ID= ENSG00000178802.17 TPM= 15.93 Transcript Type= protein_coding
chr15	74890039	74899441	74890039	74899441	+	ENST00000566377.5@MPI	ENST00000566377.5	protein_coding	74890039,74890527,74891379,74892661,74893138,74896152,74897512	74890089,74890654,74891579,74892802,74893320,74896325,74899441	Gene ID= ENSG00000178802.17 TPM= 2.41 Transcript Type= protein_coding
chr15	74899992	74906883	74899992	74906883	-	ENST00000569524.5@FAM219B	ENST00000569524.5	protein_coding	74906587,74905154,74904664,74899992	74906883,74905231,74904712,74902786	Gene ID= ENSG00000178761.14 TPM= 19.31 Transcript Type= nonsense_mediated_decay
chr15	74920275	74938131	74920275	74938131	-	transcript2228.chr15.nnic@COX5A	transcript2228.chr15.nnic	protein_coding	74937915,74929116,74923648,74920275	74938131,74929232,74923770,74920442	Gene ID= ENSG00000178741.11 TPM= 25.1 Transcript Type= NA
chr15	74919791	74938168	74919791	74938168	-	ENST00000322347.10@COX5A	ENST00000322347.10	protein_coding	74937915,74929116,74926766,74923648,74919791	74938168,74929232,74926887,74923770,74920442	Gene ID= ENSG00000178741.11 TPM= 12.55 Transcript Type= protein_coding
chr15	74920275	74938080	74920275	74938080	-	ENST00000567270.5@COX5A	ENST00000567270.5	protein_coding	74937915,74926766,74923648,74920275	74938080,74926887,74923770,74920442	Gene ID= ENSG00000178741.11 TPM= 33.14 Transcript Type= protein_coding
chr15	74920275	74938070	74920275	74938070	-	ENST00000562233.5@COX5A	ENST00000562233.5	protein_coding	74937915,74929116,74920275	74938070,74929232,74920442	Gene ID= ENSG00000178741.11 TPM= 9.01 Transcript Type= protein_coding
chr15	74954416	74957464	74954416	74957464	-	ENST00000322177.5@RPP25	ENST00000322177.5	protein_coding	74954416	74957464	Gene ID= ENSG00000178718.6 TPM= 1.93 Transcript Type= protein_coding
chr15	75023555	75050726	75023555	75050726	+	ENST00000342932.7@PPCDC	ENST00000342932.7	protein_coding	75023555,75028247,75043441,75044386,75048553,75049150	75023626,75028453,75043536,75044514,75048721,75050726	Gene ID= ENSG00000138621.11 TPM= 2.9 Transcript Type= protein_coding
chr15	75043275	75049738	75043275	75049738	+	ENST00000563393.1@PPCDC	ENST00000563393.1	protein_coding	75043275,75044386,75048553,75049150	75043536,75044514,75048721,75049738	Gene ID= ENSG00000138621.11 TPM= 2.9 Transcript Type= protein_coding
chr15	75206049	75212169	75206049	75212169	+	ENST00000567617.1@C15orf39	ENST00000567617.1	protein_coding	75206049,75210749	75208876,75212169	Gene ID= ENSG00000167173.18 TPM= 1.93 Transcript Type= protein_coding
chr15	75335891	75340273	75335891	75340273	+	ENST00000267935.12@COMMD4	ENST00000267935.12	protein_coding	75335891,75338062,75338355,75338646,75338985,75339264,75339702,75339965	75336092,75338133,75338420,75338685,75339104,75339344,75339878,75340273	Gene ID= ENSG00000140365.15 TPM= 14 Transcript Type= protein_coding
chr15	75336059	75340273	75336059	75340273	+	ENST00000338995.10@COMMD4	ENST00000338995.10	protein_coding	75336059,75338062,75338355,75338646,75338985,75339264,75339965	75336092,75338133,75338420,75338685,75339104,75339344,75340273	Gene ID= ENSG00000140365.15 TPM= 2.41 Transcript Type= protein_coding
chr15	75346745	75347582	75346745	75347582	-	transcript2292.chr15.nnic@NA	transcript2292.chr15.nnic	NA	75346745	75347582	Gene ID= novel_gene_chr15_2293 TPM= 2.9 Transcript Type= NA
chr15	75347614	75355245	75347614	75355245	+	transcript2284.chr15.nnic@NEIL1	transcript2284.chr15.nnic	protein_coding	75347614,75351869,75352324,75352602,75353739,75354250,75354964	75349344,75352230,75352387,75352701,75353866,75354818,75355245	Gene ID= ENSG00000140398.13 TPM= 1.93 Transcript Type= NA
chr15	75355792	75368621	75355792	75368621	-	transcript2274.chr15.nnic@MAN2C1	transcript2274.chr15.nnic	protein_coding	75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359059,75358704,75358507,75358201,75356793,75356606,75356301,75356110,75355792	75368621,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 5.63 Transcript Type= NA
chr15	75355792	75368630	75355792	75368630	-	ENST00000267978.9@MAN2C1	ENST00000267978.9	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368630,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 28.31 Transcript Type= protein_coding
chr15	75355792	75368595	75355792	75368595	-	ENST00000565683.5@MAN2C1	ENST00000565683.5	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368595,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359438,75359191,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 5.15 Transcript Type= protein_coding
chr15	75355792	75368592	75355792	75368592	-	ENST00000569482.5@MAN2C1	ENST00000569482.5	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368592,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356380,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 7.24 Transcript Type= protein_coding
chr15	75368155	75369584	75368155	75369584	+	ENST00000563278.1@AC068338.2	ENST00000563278.1	lincRNA	75368155	75369584	Gene ID= ENSG00000260274.1 TPM= 1.93 Transcript Type= lincRNA
chr15	75369379	75451704	75369379	75451704	-	ENST00000394947.7@SIN3A	ENST00000394947.7	protein_coding	75451423,75430187,75422647,75414205,75412763,75411492,75410134,75409836,75407055,75401852,75400730,75400040,75396258,75394680,75392242,75389652,75384264,75381613,75380629,75375665,75369379	75451704,75430408,75422823,75414311,75413045,75411743,75410286,75409991,75407144,75401970,75400940,75400156,75396496,75394863,75392815,75389821,75384437,75381705,75380723,75375872,75372209	Gene ID= ENSG00000169375.15 TPM= 3.86 Transcript Type= protein_coding
chr15	75419210	75451664	75419210	75451664	-	ENST00000567289.5@SIN3A	ENST00000567289.5	protein_coding	75451423,75430187,75419210	75451664,75430408,75422823	Gene ID= ENSG00000169375.15 TPM= 1.93 Transcript Type= protein_coding
chr15	75598083	75625642	75598083	75625642	-	transcript2301.chr15.nic@SNUPN	transcript2301.chr15.nic	protein_coding	75625336,75622342,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598083	75625642,75622490,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681	Gene ID= ENSG00000169371.13 TPM= 4.34 Transcript Type= NA
chr15	75598083	75625815	75598083	75625815	-	ENST00000308588.9@SNUPN	ENST00000308588.9	protein_coding	75625666,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598083	75625815,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681	Gene ID= ENSG00000169371.13 TPM= 24.62 Transcript Type= protein_coding
chr15	75598083	75625794	75598083	75625794	-	ENST00000567134.5@SNUPN	ENST00000567134.5	protein_coding	75625666,75622342,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598083	75625794,75622490,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681	Gene ID= ENSG00000169371.13 TPM= 4.34 Transcript Type= protein_coding
chr15	75598122	75625693	75598122	75625693	-	ENST00000564675.5@SNUPN	ENST00000564675.5	protein_coding	75625336,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598122	75625693,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681	Gene ID= ENSG00000169371.13 TPM= 2.41 Transcript Type= protein_coding
chr15	75639087	75640323	75639087	75640323	-	ENST00000403490.2@IMP3	ENST00000403490.2	protein_coding	75639087	75640323	Gene ID= ENSG00000177971.8 TPM= 133.21 Transcript Type= protein_coding
chr15	75674322	75712848	75674322	75712848	-	ENST00000308508.5@CSPG4	ENST00000308508.5	protein_coding	75712668,75693070,75687276,75685219,75684736,75682843,75682607,75682293,75677703,75674322	75712848,75693233,75690812,75685701,75684912,75683041,75682741,75682459,75677886,75677384	Gene ID= ENSG00000173546.7 TPM= 62.75 Transcript Type= protein_coding
chr15	75674623	75712849	75674623	75712849	-	transcript2314.chr15.nnic@CSPG4	transcript2314.chr15.nnic	protein_coding	75712668,75693070,75685219,75684736,75682843,75682607,75682293,75677703,75674623	75712849,75693233,75685701,75684912,75683041,75682741,75682459,75677886,75677384	Gene ID= ENSG00000173546.7 TPM= 64.68 Transcript Type= NA
chr15	75843285	75901078	75843285	75901078	+	ENST00000267938.8@UBE2Q2	ENST00000267938.8	protein_coding	75843285,75854386,75859878,75868951,75873428,75876187,75877961,75879098,75883366,75890435,75890919,75896995,75899427	75843846,75854487,75859982,75869010,75873568,75876271,75878021,75879188,75883424,75890483,75891014,75897061,75901078	Gene ID= ENSG00000140367.11 TPM= 16.41 Transcript Type= protein_coding
chr15	75843307	75901044	75843307	75901044	+	ENST00000569423.5@UBE2Q2	ENST00000569423.5	protein_coding	75843307,75854386,75868951,75873428,75876187,75877961,75879098,75883366,75890435,75890919,75896995,75899427	75843846,75854487,75869010,75873568,75876271,75878021,75879188,75883424,75890483,75891014,75897061,75901044	Gene ID= ENSG00000140367.11 TPM= 21.24 Transcript Type= protein_coding
chr15	75843395	75901044	75843395	75901044	+	transcript2325.chr15.nic@UBE2Q2	transcript2325.chr15.nic	protein_coding	75843395,75854386,75859878,75868951,75873428,75883366,75890435,75890919,75896995,75899427	75843846,75854487,75859982,75869010,75873568,75883424,75890483,75891014,75897061,75901044	Gene ID= ENSG00000140367.11 TPM= 1.93 Transcript Type= NA
chr15	75843342	75901044	75843342	75901044	+	transcript2328.chr15.nic@UBE2Q2	transcript2328.chr15.nic	protein_coding	75843342,75854386,75868951,75873428,75883366,75890435,75890919,75896995,75899427	75843846,75854487,75869010,75873568,75883424,75890483,75891014,75897061,75901044	Gene ID= ENSG00000140367.11 TPM= 8.69 Transcript Type= NA
chr15	75843398	75901044	75843398	75901044	+	transcript2331.chr15.nnic@UBE2Q2	transcript2331.chr15.nnic	protein_coding	75843398,75854386,75868951,75873428,75879098,75883366,75899427	75843846,75854487,75869010,75873568,75879188,75883424,75901044	Gene ID= ENSG00000140367.11 TPM= 1.93 Transcript Type= NA
chr15	75903859	75942510	75903859	75942510	+	ENST00000308275.7@FBXO22	ENST00000308275.7	protein_coding	75903859,75904491,75913203,75914110,75917230,75929884,75932685	75904103,75904629,75913290,75914205,75917394,75930049,75942510	Gene ID= ENSG00000167196.13 TPM= 6.76 Transcript Type= protein_coding
chr15	76216250	76311442	76216250	76311442	-	transcript2350.chr15.nnic@ETFA	transcript2350.chr15.nnic	protein_coding	76311350,76295591,76292619,76292431,76287846,76286371,76285637,76283757,76274412,76231333,76227138,76225849,76216250	76311442,76295737,76292700,76292513,76287945,76286481,76285738,76283825,76274494,76231398,76227230,76225929,76216597	Gene ID= ENSG00000140374.15 TPM= 12.23 Transcript Type= NA
chr15	76215355	76311469	76215355	76311469	-	ENST00000557943.5@ETFA	ENST00000557943.5	protein_coding	76311350,76295591,76292619,76292431,76287846,76286371,76285637,76283757,76274412,76231333,76225849,76215355	76311469,76295737,76292700,76292513,76287945,76286481,76285738,76283825,76274494,76231398,76225929,76216597	Gene ID= ENSG00000140374.15 TPM= 15.44 Transcript Type= protein_coding
chr15	76702966	76905444	76702966	76905444	-	ENST00000564590.5@SCAPER	ENST00000564590.5	protein_coding	76905299,76883812,76862416,76857809,76841734,76804533,76800248,76795280,76774855,76771724,76766918,76765563,76765337,76764961,76753808,76733229,76728595,76705903,76702966	76905444,76883876,76862533,76857879,76841931,76804633,76800364,76795440,76775117,76771954,76767088,76765638,76765454,76765072,76753948,76733384,76728737,76705984,76703002	Gene ID= ENSG00000140386.12 TPM= 5.79 Transcript Type= protein_coding
chr15	76347904	76905335	76347904	76905335	-	ENST00000563290.5@SCAPER	ENST00000563290.5	protein_coding	76905299,76883812,76862416,76857809,76841734,76804533,76800248,76795280,76774855,76771742,76766918,76765563,76765337,76764961,76753808,76733229,76728595,76705903,76702850,76701758,76665653,76621764,76574158,76504859,76471212,76434078,76404524,76381378,76376162,76353949,76351237,76347904	76905335,76883876,76862533,76857879,76841931,76804633,76800364,76795440,76775117,76771954,76767088,76765638,76765454,76765072,76753948,76733384,76728737,76705984,76703002,76701865,76665789,76621829,76574284,76504974,76471335,76434310,76404679,76381615,76376311,76354140,76351288,76348736	Gene ID= ENSG00000140386.12 TPM= 2.9 Transcript Type= protein_coding
chr15	76931619	76954392	76931619	76954392	+	ENST00000394885.7@RCN2	ENST00000394885.7	protein_coding	76931619,76932361,76935526,76943758,76947421,76948410,76949070	76931985,76932466,76935722,76943871,76947517,76948552,76954392	Gene ID= ENSG00000117906.13 TPM= 90.74 Transcript Type= protein_coding
chr15	77041404	77071228	77041404	77071228	-	ENST00000267970.8@TSPAN3	ENST00000267970.8	protein_coding	77070892,77056064,77055789,77054178,77052777,77052385,77041404	77071228,77056255,77055863,77054279,77052929,77052468,77046927	Gene ID= ENSG00000140391.14 TPM= 28.96 Transcript Type= protein_coding
chr15	77046060	77071122	77046060	77071122	-	ENST00000561277.5@TSPAN3	ENST00000561277.5	protein_coding	77071005,77056064,77055789,77054178,77052777,77052385,77046060	77071122,77056255,77055863,77054279,77052929,77052468,77046927	Gene ID= ENSG00000140391.14 TPM= 9.65 Transcript Type= protein_coding
chr15	77420520	77479810	77420520	77479810	+	transcript2394.chr15.nic@HMG20A	transcript2394.chr15.nic	protein_coding	77420520,77458404,77464240,77467095,77470910,77471783,77477555,77478295,77479179	77421004,77458496,77464387,77467307,77471042,77471814,77477630,77478510,77479810	Gene ID= ENSG00000140382.14 TPM= 2.41 Transcript Type= NA
chr15	77420651	77485607	77420651	77485607	+	ENST00000336216.8@HMG20A	ENST00000336216.8	protein_coding	77420651,77458404,77464240,77467095,77470910,77471783,77477555,77478295,77479179,77482970	77421004,77458496,77464387,77467307,77471042,77471814,77477630,77478510,77479321,77485607	Gene ID= ENSG00000140382.14 TPM= 20.27 Transcript Type= protein_coding
chr15	78104606	78131544	78104606	78131544	-	ENST00000258930.7@CIB2	ENST00000258930.7	protein_coding	78131165,78123705,78111165,78109235,78105739,78104606	78131544,78123739,78111276,78109382,78105934,78105332	Gene ID= ENSG00000136425.12 TPM= 15.44 Transcript Type= protein_coding
chr15	78149321	78171949	78149321	78171949	+	ENST00000299518.6@IDH3A	ENST00000299518.6	protein_coding	78149321,78155213,78157548,78160092,78161581,78162234,78163507,78163716,78164992,78166150,78168922	78149430,78155275,78157631,78160206,78161768,78162367,78163609,78163780,78165076,78166302,78171949	Gene ID= ENSG00000166411.13 TPM= 5.96 Transcript Type= protein_coding
chr15	78264086	78282196	78264086	78282196	+	ENST00000394855.7@DNAJA4	ENST00000394855.7	protein_coding	78264086,78264757,78270497,78273095,78274197,78275498,78280045,78280245	78264393,78264895,78270677,78273199,78274424,78275728,78280145,78282196	Gene ID= ENSG00000140403.12 TPM= 14.8 Transcript Type= protein_coding
chr15	78264510	78282192	78264510	78282192	+	transcript2450.chr15.nic@DNAJA4	transcript2450.chr15.nic	protein_coding	78264510,78265481,78270497,78273095,78274197,78275498,78280045,78280245	78264895,78266293,78270677,78273199,78274424,78275728,78280145,78282192	Gene ID= ENSG00000140403.12 TPM= 14.48 Transcript Type= NA
chr15	78264562	78282196	78264562	78282196	+	ENST00000343789.7@DNAJA4	ENST00000343789.7	protein_coding	78264562,78264757,78270497,78273095,78274197,78275498,78280045,78280245	78264585,78264895,78270677,78273199,78274424,78275728,78280145,78282196	Gene ID= ENSG00000140403.12 TPM= 12.87 Transcript Type= protein_coding
chr15	78264574	78282192	78264574	78282192	+	ENST00000394852.7@DNAJA4	ENST00000394852.7	protein_coding	78264574,78270497,78273095,78274197,78275498,78280045,78280245	78264895,78270677,78273199,78274424,78275728,78280145,78282192	Gene ID= ENSG00000140403.12 TPM= 102.64 Transcript Type= protein_coding
chr15	78266181	78280684	78266181	78280684	+	ENST00000446172.2@DNAJA4	ENST00000446172.2	protein_coding	78266181,78270497,78273095,78274197,78275498,78280045,78280245	78266293,78270677,78273199,78274424,78275728,78280145,78280684	Gene ID= ENSG00000140403.12 TPM= 12.55 Transcript Type= protein_coding
chr15	78273659	78299596	78273659	78299596	-	transcript2434.chr15.nnic@WDR61	transcript2434.chr15.nnic	protein_coding	78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78278208,78273659	78299596,78295725,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285339,78278301,78274997	Gene ID= ENSG00000140395.8 TPM= 2.9 Transcript Type= NA
chr15	78283235	78299794	78283235	78299794	-	ENST00000267973.6@WDR61	ENST00000267973.6	protein_coding	78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78283235	78299794,78295725,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285339,78283521	Gene ID= ENSG00000140395.8 TPM= 53.57 Transcript Type= protein_coding
chr15	78283235	78299605	78283235	78299605	-	ENST00000558311.5@WDR61	ENST00000558311.5	protein_coding	78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78283235	78299605,78295793,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285339,78283521	Gene ID= ENSG00000140395.8 TPM= 2.41 Transcript Type= protein_coding
chr15	78283256	78299591	78283256	78299591	-	ENST00000558459.5@WDR61	ENST00000558459.5	protein_coding	78299562,78295675,78294946,78289951,78289619,78288289,78286041,78285261,78283256	78299591,78295725,78294973,78290099,78289712,78288382,78286133,78285339,78283521	Gene ID= ENSG00000140395.8 TPM= 1.93 Transcript Type= protein_coding
chr15	78438189	78501456	78438189	78501456	+	ENST00000258886.12@IREB2	ENST00000258886.12	protein_coding	78438189,78439795,78462922,78465251,78466271,78470532,78471741,78473242,78476188,78478297,78483318,78484761,78485705,78487733,78488180,78488647,78490422,78490619,78493909,78494142,78497126,78498033	78438356,78439881,78463087,78465388,78466489,78470601,78471924,78473381,78476359,78478397,78483434,78484920,78485840,78487817,78488336,78488771,78490526,78490761,78494056,78494264,78497311,78501456	Gene ID= ENSG00000136381.12 TPM= 16.41 Transcript Type= protein_coding
chr15	78507564	78537372	78507564	78537372	+	ENST00000408962.6@HYKK	ENST00000408962.6	protein_coding	78507564,78513084,78514968,78527380,78537300	78507671,78513425,78515107,78527563,78537372	Gene ID= ENSG00000188266.13 TPM= 4.83 Transcript Type= protein_coding
chr15	78540402	78552417	78540402	78552417	+	transcript2475.chr15.nnic@PSMA4	transcript2475.chr15.nnic	protein_coding	78540402,78541905,78542177,78542483,78544190,78544869,78545634,78546575,78550508	78540539,78541930,78542219,78542645,78544267,78544957,78545764,78546698,78552417	Gene ID= ENSG00000041357.15 TPM= 7.72 Transcript Type= NA
chr15	78540421	78549186	78540421	78549186	+	ENST00000559082.5@PSMA4	ENST00000559082.5	protein_coding	78540421,78541905,78542177,78542483,78544190,78544869,78545634,78546575,78548790	78540463,78541930,78542219,78542645,78544267,78544957,78545764,78546698,78549186	Gene ID= ENSG00000041357.15 TPM= 11.1 Transcript Type= protein_coding
chr15	78540427	78549204	78540427	78549204	+	ENST00000413382.6@PSMA4	ENST00000413382.6	protein_coding	78540427,78541905,78542177,78544190,78544869,78545634,78546575,78548790	78540539,78541930,78542219,78544267,78544957,78545764,78546698,78549204	Gene ID= ENSG00000041357.15 TPM= 9.17 Transcript Type= protein_coding
chr15	78872776	78897733	78872776	78897733	+	ENST00000426013.6@MORF4L1	ENST00000426013.6	protein_coding	78872776,78878213,78880512,78886141,78887269,78890989,78891484,78892212,78893539,78894058,78894820,78896983	78873057,78878259,78880579,78886227,78887349,78891014,78891572,78892313,78893627,78894230,78894904,78897733	Gene ID= ENSG00000185787.14 TPM= 213.33 Transcript Type= protein_coding
chr15	79311062	79322847	79311062	79322847	+	ENST00000299705.9@TMED3	ENST00000299705.9	protein_coding	79311062,79313757,79321978	79311417,79314005,79322847	Gene ID= ENSG00000166557.12 TPM= 5.79 Transcript Type= protein_coding
chr15	79844976	79897379	79844976	79897379	-	ENST00000559722.2@MTHFS	ENST00000559722.2	protein_coding	79897161,79889093,79844976	79897379,79889354,79845442	Gene ID= ENSG00000136371.10 TPM= 2.9 Transcript Type= protein_coding
chr15	79844976	79897043	79844976	79897043	-	transcript2505.chr15.nic@MTHFS	transcript2505.chr15.nic	protein_coding	79896791,79889093,79844976	79897043,79889354,79845442	Gene ID= ENSG00000136371.10 TPM= 2.9 Transcript Type= NA
chr15	79844976	79897049	79844976	79897049	-	ENST00000258874.3@MTHFS	ENST00000258874.3	protein_coding	79896872,79889093,79844976	79897049,79889354,79845442	Gene ID= ENSG00000136371.10 TPM= 3.86 Transcript Type= protein_coding
chr15	79920276	79923756	79920276	79923756	-	transcript2515.chr15.nnic@NA	transcript2515.chr15.nnic	NA	79920276	79923756	Gene ID= novel_gene_chr15_2516 TPM= 2.9 Transcript Type= NA
chr15	80059568	80138393	80059568	80138393	+	ENST00000261749.10@ZFAND6	ENST00000261749.10	protein_coding	80059568,80098416,80120328,80121712,80122700,80131180,80137480	80059809,80098578,80120498,80121820,80122800,80131293,80138393	Gene ID= ENSG00000086666.18 TPM= 20.75 Transcript Type= protein_coding
chr15	80059927	80138379	80059927	80138379	+	transcript2524.chr15.nnic@ZFAND6	transcript2524.chr15.nnic	protein_coding	80059927,80120328,80121712,80122700,80131180,80137480	80059963,80120498,80121820,80122800,80131293,80138379	Gene ID= ENSG00000086666.18 TPM= 8.69 Transcript Type= NA
chr15	80059714	80138360	80059714	80138360	+	ENST00000558494.5@ZFAND6	ENST00000558494.5	protein_coding	80059714,80120328,80121712,80122700,80131180,80137480	80059809,80120498,80121820,80122800,80131293,80138360	Gene ID= ENSG00000086666.18 TPM= 95.08 Transcript Type= protein_coding
chr15	80152794	80186343	80152794	80186343	+	ENST00000261755.9@FAH	ENST00000261755.9	protein_coding	80152794,80153026,80158060,80159756,80160410,80162246,80168052,80168264,80172149,80173014,80175016,80177537,80180124,80181042,80186130	80152841,80153135,80158170,80159877,80160459,80162336,80168149,80168316,80172248,80173144,80175091,80177583,80180225,80181159,80186343	Gene ID= ENSG00000103876.11 TPM= 6.76 Transcript Type= protein_coding
chr15	80152897	80186340	80152897	80186340	+	ENST00000561421.5@FAH	ENST00000561421.5	protein_coding	80152897,80158060,80159756,80160410,80162246,80168052,80168264,80172149,80173014,80175016,80177537,80180124,80181042,80186130	80153135,80158170,80159877,80160459,80162336,80168149,80168316,80172248,80173144,80175091,80177583,80180225,80181159,80186340	Gene ID= ENSG00000103876.11 TPM= 2.9 Transcript Type= protein_coding
chr15	81000896	81004001	81000896	81004001	+	transcript2540.chr15.nnic@NA	transcript2540.chr15.nnic	NA	81000896	81004001	Gene ID= novel_gene_chr15_2541 TPM= 4.83 Transcript Type= NA
chr15	82130230	82262763	82130230	82262763	-	ENST00000268206.11@EFL1	ENST00000268206.11	protein_coding	82262614,82261688,82259088,82252691,82241270,82240418,82238307,82230848,82229034,82228191,82227450,82225165,82220078,82219652,82214717,82163853,82157713,82151465,82138658,82130230	82262763,82261797,82259155,82252775,82241403,82240555,82238521,82230971,82229110,82228327,82227572,82225264,82220229,82219818,82214855,82163984,82157860,82152423,82138842,82130561	Gene ID= ENSG00000140598.13 TPM= 19.79 Transcript Type= protein_coding
chr15	82130233	82262714	82130233	82262714	-	ENST00000359445.7@EFL1	ENST00000359445.7	protein_coding	82262614,82261688,82241270,82240418,82238307,82230848,82229034,82228191,82227450,82225165,82220078,82219652,82214717,82163853,82157713,82151465,82138658,82130233	82262714,82261797,82241403,82240555,82238521,82230971,82229110,82228327,82227572,82225264,82220229,82219818,82214855,82163984,82157860,82152423,82138842,82130561	Gene ID= ENSG00000140598.13 TPM= 2.41 Transcript Type= protein_coding
chr15	82333570	82334609	82333570	82334609	+	transcript2552.chr15.nnic@ADAMTS7P1	transcript2552.chr15.nnic	transcribed_unprocessed_pseudogene	82333570,82334244	82333909,82334609	Gene ID= ENSG00000274376.4 TPM= 1.93 Transcript Type= NA
chr15	82471950	82513940	82471950	82513940	-	transcript2565.chr15.nnic@GOLGA2P10	transcript2565.chr15.nnic	transcribed_unprocessed_pseudogene	82513666,82477838,82477033,82475478,82471950	82513940,82477926,82477123,82475615,82473481	Gene ID= ENSG00000255769.7 TPM= 2.9 Transcript Type= NA
chr15	82536753	82540564	82536753	82540564	-	ENST00000330244.10@RPS17	ENST00000330244.10	protein_coding	82540426,82539981,82538880,82538306,82536753	82540564,82540132,82538985,82538371,82536881	Gene ID= ENSG00000182774.10 TPM= 327.24 Transcript Type= protein_coding
chr15	82536755	82540457	82536755	82540457	-	ENST00000560229.5@RPS17	ENST00000560229.5	protein_coding	82539981,82538880,82538306,82536755	82540457,82538985,82538371,82536881	Gene ID= ENSG00000182774.10 TPM= 42.47 Transcript Type= retained_intron
chr15	82750566	82757081	82750566	82757081	+	transcript2584.chr15.nnic@SNHG21	transcript2584.chr15.nnic	antisense_RNA	82750566,82752439,82754629,82756730,82756904	82750848,82752554,82754784,82756785,82757081	Gene ID= ENSG00000250988.7 TPM= 1.93 Transcript Type= NA
chr15	82750583	82757206	82750583	82757206	+	ENST00000558174.5@SNHG21	ENST00000558174.5	antisense_RNA	82750583,82754629,82756904	82750848,82754784,82757206	Gene ID= ENSG00000250988.7 TPM= 2.9 Transcript Type= antisense_RNA
chr15	82750572	82757204	82750572	82757204	+	ENST00000561107.5@SNHG21	ENST00000561107.5	antisense_RNA	82750572,82754629,82756730,82756904	82750848,82754784,82756785,82757204	Gene ID= ENSG00000250988.7 TPM= 4.83 Transcript Type= antisense_RNA
chr15	82758636	82806070	82758636	82806070	-	transcript2573.chr15.nic@FSD2	transcript2573.chr15.nic	protein_coding	82805966,82796250,82786752,82786511,82782795,82780245,82778766,82772073,82769750,82768880,82765898,82765166,82762102,82758636	82806070,82796366,82787468,82786606,82783025,82780267,82778887,82772228,82769884,82769030,82766031,82765298,82762278,82759600	Gene ID= ENSG00000186628.12 TPM= 4.83 Transcript Type= NA
chr15	82759802	82761226	82759802	82761226	-	transcript2591.chr15.nnic@NA	transcript2591.chr15.nnic	NA	82759802	82761226	Gene ID= novel_gene_chr15_2592 TPM= 1.93 Transcript Type= NA
chr15	82808228	82810622	82808228	82810622	-	transcript2637.chr15.nnic@NA	transcript2637.chr15.nnic	NA	82808228	82810622	Gene ID= novel_gene_chr15_2638 TPM= 4.83 Transcript Type= NA
chr15	82809603	82826794	82809603	82826794	+	transcript2610.chr15.nnic@WHAMM	transcript2610.chr15.nnic	protein_coding	82809603,82813103,82816692,82817920,82819323,82821711,82823100,82826410,82826751	82810335,82813276,82816842,82818089,82819488,82821839,82823287,82826496,82826794	Gene ID= ENSG00000156232.7 TPM= 1.93 Transcript Type= NA
chr15	82809603	82826794	82809603	82826794	+	transcript2622.chr15.nic@WHAMM	transcript2622.chr15.nic	protein_coding	82809603,82813103,82816692,82817920,82819323,82823100,82826410,82826751	82810335,82813276,82816842,82818089,82819488,82823287,82826496,82826794	Gene ID= ENSG00000156232.7 TPM= 2.9 Transcript Type= NA
chr15	82809628	82836108	82809628	82836108	+	ENST00000286760.5@WHAMM	ENST00000286760.5	protein_coding	82809628,82813103,82816692,82817920,82819323,82823100,82826410,82826751,82830599,82833229	82810335,82813276,82816842,82818089,82819488,82823287,82826496,82826846,82831079,82836108	Gene ID= ENSG00000156232.7 TPM= 9.65 Transcript Type= protein_coding
chr15	82842463	82952692	82842463	82952692	-	transcript2605.chr15.nic@HOMER2	transcript2605.chr15.nic	protein_coding	82952531,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82849689,82842463	82952692,82892841,82875404,82864259,82859168,82854800,82852252,82851231,82849903,82847247	Gene ID= ENSG00000103942.12 TPM= 5.79 Transcript Type= NA
chr15	82848983	82952690	82848983	82952690	-	transcript2624.chr15.nnic@HOMER2	transcript2624.chr15.nnic	protein_coding	82952531,82892685,82864167,82859029,82854644,82852142,82851151,82848983	82952690,82892841,82864259,82859135,82854800,82852252,82851231,82849903	Gene ID= ENSG00000103942.12 TPM= 4.18 Transcript Type= NA
chr15	82848983	82952721	82848983	82952721	-	ENST00000450735.6@HOMER2	ENST00000450735.6	protein_coding	82952531,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848983	82952721,82892841,82875404,82864259,82859135,82854800,82852252,82851231,82849903	Gene ID= ENSG00000103942.12 TPM= 85.27 Transcript Type= protein_coding
chr15	82848983	82952728	82848983	82952728	-	ENST00000304231.12@HOMER2	ENST00000304231.12	protein_coding	82952531,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848983	82952728,82892841,82875404,82864259,82859168,82854800,82852252,82851231,82849903	Gene ID= ENSG00000103942.12 TPM= 7.08 Transcript Type= protein_coding
chr15	82986207	82991057	82986207	82991057	+	ENST00000304191.3@FAM103A1	ENST00000304191.3	protein_coding	82986207,82987336,82989010,82989881	82986369,82987384,82989188,82991057	Gene ID= ENSG00000169612.3 TPM= 4.83 Transcript Type= protein_coding
chr15	83004686	83011585	83004686	83011585	-	ENST00000508990.2@C15orf40	ENST00000508990.2	protein_coding	83011497,83010237,83008548,83004686	83011585,83010363,83008675,83004972	Gene ID= ENSG00000169609.13 TPM= 1.93 Transcript Type= protein_coding
chr15	83016422	83067360	83016422	83067360	-	transcript2652.chr15.nic@BTBD1	transcript2652.chr15.nic	protein_coding	83066751,83056389,83050073,83041728,83030136,83028616,83020675,83018707,83016422	83067360,83056545,83050178,83041925,83030328,83028728,83020762,83018853,83018225	Gene ID= ENSG00000064726.9 TPM= 24.13 Transcript Type= NA
chr15	83016422	83067429	83016422	83067429	-	transcript2661.chr15.nic@BTBD1	transcript2661.chr15.nic	protein_coding	83066751,83056389,83041728,83030136,83020675,83018707,83016422	83067429,83056545,83041925,83030328,83020762,83018853,83018225	Gene ID= ENSG00000064726.9 TPM= 35.72 Transcript Type= NA
chr15	83016422	83067354	83016422	83067354	-	ENST00000261721.8@BTBD1	ENST00000261721.8	protein_coding	83066751,83056389,83050073,83041728,83030136,83020675,83018707,83016422	83067354,83056545,83050178,83041925,83030328,83020762,83018853,83018225	Gene ID= ENSG00000064726.9 TPM= 575.33 Transcript Type= protein_coding
chr15	83107374	83137359	83107374	83137359	+	transcript2684.chr15.nnic@TM6SF1	transcript2684.chr15.nnic	protein_coding	83107374,83112797,83115845,83119578,83124672,83126755,83127358,83136481	83107772,83112900,83115942,83119681,83124776,83126847,83127477,83137359	Gene ID= ENSG00000136404.15 TPM= 1.93 Transcript Type= NA
chr15	83107407	83137359	83107407	83137359	+	ENST00000322019.13@TM6SF1	ENST00000322019.13	protein_coding	83107407,83112797,83115845,83119578,83121921,83122757,83124672,83126755,83127358,83136481	83107772,83112900,83115942,83119681,83122003,83122878,83124776,83126847,83127477,83137359	Gene ID= ENSG00000136404.15 TPM= 16.41 Transcript Type= protein_coding
chr15	83157472	83207859	83157472	83207859	-	transcript2693.chr15.nic@HDGFL3	transcript2693.chr15.nic	protein_coding	83207331,83163999,83157903,83157472	83207859,83164075,83158041,83157573	Gene ID= ENSG00000166503.8 TPM= 1.93 Transcript Type= NA
chr15	84198853	84230135	84198853	84230135	-	transcript2698.chr15.nic@GOLGA2P7	transcript2698.chr15.nic	transcribed_unprocessed_pseudogene	84229852,84205231,84204787,84204600,84204426,84204177,84202870,84198853	84230135,84205319,84204975,84204691,84204516,84204331,84203020,84200876	Gene ID= ENSG00000225151.10 TPM= 6.76 Transcript Type= NA
chr15	84604723	84634024	84604723	84634024	-	transcript2731.chr15.nnic@AC048382.5	transcript2731.chr15.nnic	antisense_RNA	84633479,84631312,84604723	84634024,84632278,84606463	Gene ID= ENSG00000275120.2 TPM= 1.93 Transcript Type= NA
chr15	84623269	84634166	84623269	84634166	-	transcript2736.chr15.nnic@AC048382.5	transcript2736.chr15.nnic	antisense_RNA	84633524,84631299,84623269	84634166,84632278,84623577	Gene ID= ENSG00000275120.2 TPM= 1.93 Transcript Type= NA
chr15	84601005	84623716	84601005	84623716	+	ENST00000448803.6@ZSCAN2	ENST00000448803.6	protein_coding	84601005,84603820,84620602	84601188,84604333,84623716	Gene ID= ENSG00000176371.13 TPM= 2.9 Transcript Type= protein_coding
chr15	84601018	84606889	84601018	84606889	+	ENST00000334141.7@ZSCAN2	ENST00000334141.7	protein_coding	84601018,84603820,84606529	84601135,84604333,84606889	Gene ID= ENSG00000176371.13 TPM= 1.93 Transcript Type= protein_coding
chr15	84601050	84616614	84601050	84616614	+	ENST00000379358.7@ZSCAN2	ENST00000379358.7	protein_coding	84601050,84603820,84616309	84601135,84604333,84616614	Gene ID= ENSG00000176371.13 TPM= 1.93 Transcript Type= protein_coding
chr15	84631459	84640754	84631459	84640754	+	transcript2717.chr15.nic@SCAND2P	transcript2717.chr15.nic	transcribed_unprocessed_pseudogene	84631459,84633824,84635852,84637347,84638396,84639508	84632298,84634381,84635912,84637420,84638477,84640754	Gene ID= ENSG00000176700.19 TPM= 1.93 Transcript Type= NA
chr15	84631459	84641048	84631459	84641048	+	transcript2721.chr15.nic@SCAND2P	transcript2721.chr15.nic	transcribed_unprocessed_pseudogene	84631459,84633824,84637347,84638396,84639508	84632298,84634381,84637420,84638477,84641048	Gene ID= ENSG00000176700.19 TPM= 2.9 Transcript Type= NA
chr15	84631451	84647478	84631451	84647478	+	ENST00000348993.9@SCAND2P	ENST00000348993.9	transcribed_unprocessed_pseudogene	84631451,84637347,84638396,84639508	84632298,84637420,84638477,84647478	Gene ID= ENSG00000176700.19 TPM= 1.93 Transcript Type= processed_transcript
chr15	84639281	84654335	84639281	84654335	-	ENST00000434634.6@WDR73	ENST00000434634.6	protein_coding	84654234,84653632,84652714,84648537,84647890,84646184,84645471,84639281	84654335,84653699,84652802,84648625,84647954,84646348,84645836,84643723	Gene ID= ENSG00000177082.12 TPM= 10.62 Transcript Type= protein_coding
chr15	84642768	84654343	84642768	84654343	-	ENST00000398528.7@WDR73	ENST00000398528.7	protein_coding	84654227,84653632,84652714,84648537,84647890,84646184,84645471,84642768	84654343,84653699,84652802,84648625,84647954,84646348,84645836,84643723	Gene ID= ENSG00000177082.12 TPM= 9.65 Transcript Type= processed_transcript
chr15	84655129	84658548	84655129	84658548	-	ENST00000360476.7@NMB	ENST00000360476.7	protein_coding	84657996,84657176,84655129	84658548,84657348,84655409	Gene ID= ENSG00000197696.9 TPM= 2.9 Transcript Type= protein_coding
chr15	84669544	84716716	84669544	84716716	-	ENST00000268220.11@SEC11A	ENST00000268220.11	protein_coding	84716025,84691535,84687625,84680713,84670725,84669544	84716716,84691644,84687774,84680832,84670782,84670069	Gene ID= ENSG00000140612.13 TPM= 50.68 Transcript Type= protein_coding
chr15	84669544	84716111	84669544	84716111	-	ENST00000560266.5@SEC11A	ENST00000560266.5	protein_coding	84716025,84691535,84687625,84680713,84679932,84670725,84669544	84716111,84691644,84687774,84680832,84679969,84670782,84670069	Gene ID= ENSG00000140612.13 TPM= 18.34 Transcript Type= protein_coding
chr15	84669560	84716163	84669560	84716163	-	ENST00000455959.7@SEC11A	ENST00000455959.7	protein_coding	84716025,84714731,84691535,84687625,84680713,84670725,84669560	84716163,84714866,84691644,84687774,84680832,84670782,84670069	Gene ID= ENSG00000140612.13 TPM= 2.9 Transcript Type= protein_coding
chr15	84669545	84716063	84669545	84716063	-	ENST00000558217.5@SEC11A	ENST00000558217.5	protein_coding	84716025,84691535,84687625,84670725,84669545	84716063,84691644,84687774,84670782,84670069	Gene ID= ENSG00000140612.13 TPM= 1.45 Transcript Type= protein_coding
chr15	84778260	84802438	84778260	84802438	+	ENST00000559607.1@ZNF592	ENST00000559607.1	protein_coding	84778260,84782657,84790705,84797869,84798315,84798588,84799098,84799842,84801863	84778312,84784895,84790872,84798045,84798474,84798875,84799210,84799977,84802438	Gene ID= ENSG00000166716.9 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr15	84816680	84873482	84816680	84873482	+	ENST00000258888.5@ALPK3	ENST00000258888.5	protein_coding	84816680,84823330,84827484,84838980,84839702,84856392,84859243,84859776,84860037,84862635,84863552,84864442,84867317,84868111	84817595,84823368,84827605,84839097,84840932,84858555,84859390,84859903,84860072,84862915,84863640,84864665,84867365,84873482	Gene ID= ENSG00000136383.6 TPM= 127.9 Transcript Type= protein_coding
chr15	84817351	84870329	84817351	84870329	+	transcript2756.chr15.nnic@ALPK3	transcript2756.chr15.nnic	protein_coding	84817351,84827484,84838980,84839702,84856392,84859243,84859776,84860037,84862635,84863552,84864442,84867317,84868111	84817595,84827605,84839097,84840932,84858555,84859390,84859903,84860072,84862915,84863640,84864665,84867365,84870329	Gene ID= ENSG00000136383.6 TPM= 247.6 Transcript Type= NA
chr15	84981979	85064992	84981979	85064992	+	transcript2777.chr15.nic@PDE8A	transcript2777.chr15.nic	protein_coding	84981979,85064370	84982348,85064992	Gene ID= ENSG00000073417.14 TPM= 1.93 Transcript Type= NA
chr15	84981695	84984932	84981695	84984932	+	transcript2778.chr15.nnic@NA	transcript2778.chr15.nnic	NA	84981695	84984932	Gene ID= novel_gene_chr15_2779 TPM= 1.93 Transcript Type= NA
chr15	85582890	85743766	85582890	85743766	+	transcript2780.chr15.nic@AKAP13	transcript2780.chr15.nic	protein_coding	85582890,85585702,85639374,85645818,85655417,85658537,85662388,85664563,85669722,85682158,85684741,85693277,85708019,85710579,85715788,85717290,85718013,85719076,85721991,85722230,85723072,85726410,85727066,85727381,85730513,85734992,85735560,85736090,85740222,85741046,85743492	85583164,85585823,85639449,85645954,85655787,85658590,85662453,85664755,85669830,85682212,85684873,85693451,85708086,85710645,85715923,85717402,85718159,85719326,85722116,85722347,85723320,85726486,85727247,85727463,85730707,85735150,85735630,85736134,85740272,85741495,85743766	Gene ID= ENSG00000170776.21 TPM= 6.76 Transcript Type= NA
chr15	85582890	85684874	85582890	85684874	+	transcript2790.chr15.nnic@AKAP13	transcript2790.chr15.nnic	protein_coding	85582890,85585702,85639374,85645818,85655417,85658537,85664563,85669722,85676976,85682158,85684741	85583164,85585823,85639449,85645954,85655787,85658590,85664755,85669830,85677098,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 2.9 Transcript Type= NA
chr15	85582890	85684874	85582890	85684874	+	transcript2792.chr15.nic@AKAP13	transcript2792.chr15.nic	protein_coding	85582890,85585702,85639374,85645818,85655417,85658537,85664563,85669722,85682158,85684741	85583164,85585823,85639449,85645954,85655787,85658590,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 2.9 Transcript Type= NA
chr15	85582905	85684874	85582905	85684874	+	transcript2793.chr15.nnic@AKAP13	transcript2793.chr15.nnic	protein_coding	85582905,85585702,85639374,85645818,85655417,85658537,85664563,85669722,85682158,85684741	85583076,85585823,85639449,85645954,85655787,85658590,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 1.93 Transcript Type= NA
chr15	85380574	85579184	85380574	85579184	+	transcript2794.chr15.nic@AKAP13	transcript2794.chr15.nic	protein_coding	85380574,85485710,85521428,85533584,85543772,85575131,85578930	85380798,85485753,85521575,85533880,85543955,85575329,85579184	Gene ID= ENSG00000170776.21 TPM= 1.93 Transcript Type= NA
chr15	85380587	85684874	85380587	85684874	+	ENST00000559362.5@AKAP13	ENST00000559362.5	protein_coding	85380587,85485710,85521428,85533584,85543772,85575131,85578930,85585702,85639374,85645818,85655417,85664563,85669722,85682158,85684741	85380798,85485753,85521575,85533880,85543955,85575329,85582107,85585823,85639449,85645954,85655787,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 1.93 Transcript Type= protein_coding
chr15	85759326	85794949	85759326	85794949	-	transcript2797.chr15.nnic@KLHL25	transcript2797.chr15.nnic	protein_coding	85794766,85768017,85760308,85759326	85794949,85769820,85761011,85760231	Gene ID= ENSG00000183655.12 TPM= 14.32 Transcript Type= NA
chr15	85759323	85795030	85759323	85795030	-	ENST00000337975.5@KLHL25	ENST00000337975.5	protein_coding	85794766,85768017,85759323	85795030,85769820,85761011	Gene ID= ENSG00000183655.12 TPM= 56.79 Transcript Type= protein_coding
chr15	85766995	85794949	85766995	85794949	-	transcript2802.chr15.nic@KLHL25	transcript2802.chr15.nic	protein_coding	85794766,85766995	85794949,85769820	Gene ID= ENSG00000183655.12 TPM= 4.18 Transcript Type= NA
chr15	88459476	88467419	88459476	88467419	-	ENST00000312475.4@MRPL46	ENST00000312475.4	protein_coding	88467150,88465587,88464703,88459476	88467419,88465773,88464876,88459863	Gene ID= ENSG00000259494.1 TPM= 87.84 Transcript Type= protein_coding
chr15	88459476	88467416	88459476	88467416	-	transcript2817.chr15.nic@MRPL46	transcript2817.chr15.nic	protein_coding	88467150,88464703,88459476	88467416,88465773,88459863	Gene ID= ENSG00000259494.1 TPM= 1.93 Transcript Type= NA
chr15	88467453	88480773	88467453	88480773	+	ENST00000325844.8@MRPS11	ENST00000325844.8	protein_coding	88467453,88467908,88472627,88475110,88476989,88477872	88467782,88468024,88472725,88475239,88477054,88480773	Gene ID= ENSG00000181991.15 TPM= 29.92 Transcript Type= protein_coding
chr15	88467718	88478259	88467718	88478259	+	ENST00000353598.6@MRPS11	ENST00000353598.6	protein_coding	88467718,88467908,88475110,88476989,88477872	88467782,88468024,88475239,88477054,88478259	Gene ID= ENSG00000181991.15 TPM= 1.93 Transcript Type= protein_coding
chr15	88512483	88546653	88512483	88546653	-	ENST00000564406.5@DET1	ENST00000564406.5	protein_coding	88546540,88536312,88530623,88527599,88516782,88512483	88546653,88536381,88531715,88527786,88516973,88513140	Gene ID= ENSG00000140543.14 TPM= 7.72 Transcript Type= protein_coding
chr15	88512483	88546675	88512483	88546675	-	ENST00000268148.12@DET1	ENST00000268148.12	protein_coding	88546540,88530623,88527599,88516782,88512483	88546675,88531715,88527786,88516973,88513140	Gene ID= ENSG00000140543.14 TPM= 6.76 Transcript Type= protein_coding
chr15	88621296	88632282	88621296	88632282	+	ENST00000332810.3@AEN	ENST00000332810.3	protein_coding	88621296,88626146,88629226,88630058	88621382,88626749,88629426,88632282	Gene ID= ENSG00000181026.14 TPM= 185.34 Transcript Type= protein_coding
chr15	88621385	88632281	88621385	88632281	+	transcript2831.chr15.nic@AEN	transcript2831.chr15.nic	protein_coding	88621385,88626146,88629226,88630058	88621663,88626749,88629426,88632281	Gene ID= ENSG00000181026.14 TPM= 31.86 Transcript Type= NA
chr15	88877288	88895626	88877288	88895626	-	ENST00000359595.7@HAPLN3	ENST00000359595.7	protein_coding	88895459,88887175,88881357,88878967,88877288	88895626,88887345,88881725,88879269,88878256	Gene ID= ENSG00000140511.11 TPM= 2.9 Transcript Type= protein_coding
chr15	88898683	88913414	88898683	88913414	-	transcript2841.chr15.nnic@MFGE8	transcript2841.chr15.nnic	protein_coding	88913247,88909792,88907195,88906626,88905757,88901557,88899656,88898683	88913414,88909923,88907376,88906778,88905901,88901735,88899817,88899532	Gene ID= ENSG00000140545.14 TPM= 117.45 Transcript Type= NA
chr15	88903473	88913159	88903473	88913159	-	transcript2856.chr15.nnic@MFGE8	transcript2856.chr15.nnic	protein_coding	88912428,88909792,88907195,88906626,88903473	88913159,88909923,88907376,88906778,88905901	Gene ID= ENSG00000140545.14 TPM= 9.82 Transcript Type= NA
chr15	88903473	88913414	88903473	88913414	-	transcript2857.chr15.nic@MFGE8	transcript2857.chr15.nic	protein_coding	88913247,88909792,88907195,88906626,88903473	88913414,88909923,88907376,88906778,88905901	Gene ID= ENSG00000140545.14 TPM= 24.3 Transcript Type= NA
chr15	88898683	88903515	88898683	88903515	-	transcript2863.chr15.nnic@MFGE8	transcript2863.chr15.nnic	protein_coding	88901557,88899656,88898683	88903515,88899817,88899532	Gene ID= ENSG00000140545.14 TPM= 9.65 Transcript Type= NA
chr15	88903473	88909428	88903473	88909428	-	transcript2864.chr15.nic@MFGE8	transcript2864.chr15.nic	protein_coding	88907195,88906626,88903473	88909428,88906778,88905901	Gene ID= ENSG00000140545.14 TPM= 8.21 Transcript Type= NA
chr15	88898714	88913411	88898714	88913411	-	ENST00000268150.12@MFGE8	ENST00000268150.12	protein_coding	88913247,88909792,88907195,88906626,88905757,88901551,88899656,88898714	88913411,88909923,88907376,88906778,88905901,88901735,88899811,88899532	Gene ID= ENSG00000140545.14 TPM= 20.92 Transcript Type= protein_coding
chr15	88898713	88913381	88898713	88913381	-	ENST00000268151.11@MFGE8	ENST00000268151.11	protein_coding	88913247,88909792,88907195,88906626,88905757,88901551,88898713	88913381,88909923,88907376,88906778,88905901,88901735,88899532	Gene ID= ENSG00000140545.14 TPM= 4.51 Transcript Type= protein_coding
chr15	88909929	88911750	88909929	88911750	+	transcript2866.chr15.nnic@NA	transcript2866.chr15.nnic	NA	88909929	88911750	Gene ID= novel_gene_chr15_2867 TPM= 99.43 Transcript Type= NA
chr15	89088150	89202360	89088150	89202360	+	ENST00000352732.9@ABHD2	ENST00000352732.9	protein_coding	89088150,89113725,89116322,89151677,89155367,89175812,89185424,89188193,89191080,89193235,89195227	89088563,89113824,89116521,89151852,89155534,89175995,89185516,89188303,89191149,89193319,89202360	Gene ID= ENSG00000140526.17 TPM= 69.99 Transcript Type= protein_coding
chr15	89088418	89193938	89088418	89193938	+	transcript2876.chr15.nic@ABHD2	transcript2876.chr15.nic	protein_coding	89088418,89113725,89116322,89151677,89155367,89175812,89185424,89188193,89191080,89193235	89088563,89113824,89116521,89151852,89155534,89175995,89185516,89188303,89191149,89193938	Gene ID= ENSG00000140526.17 TPM= 3.38 Transcript Type= NA
chr15	89316320	89334856	89316320	89334856	-	transcript2891.chr15.nnic@POLG	transcript2891.chr15.nnic	protein_coding	89334685,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89316320	89334856,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89316827	Gene ID= ENSG00000140521.12 TPM= 8.21 Transcript Type= NA
chr15	89316320	89334861	89316320	89334861	-	ENST00000442287.6@POLG	ENST00000442287.6	protein_coding	89334685,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89317376,89316320	89334861,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89317536,89316827	Gene ID= ENSG00000140521.12 TPM= 46.33 Transcript Type= protein_coding
chr15	89316305	89334847	89316305	89334847	-	ENST00000268124.9@POLG	ENST00000268124.9	protein_coding	89334673,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89317376,89316305	89334847,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89317536,89316827	Gene ID= ENSG00000140521.12 TPM= 32.82 Transcript Type= protein_coding
chr15	89664365	89679402	89664365	89679402	-	ENST00000300055.9@PLIN1	ENST00000300055.9	protein_coding	89679251,89677445,89673210,89671482,89669980,89669500,89667602,89666936,89664365	89679402,89677503,89673414,89671564,89670244,89669672,89667793,89667181,89665942	Gene ID= ENSG00000166819.11 TPM= 9.65 Transcript Type= protein_coding
chr15	89681531	89690782	89681531	89690782	-	ENST00000300056.7@PEX11A	ENST00000300056.7	protein_coding	89690577,89686431,89681531	89690782,89686546,89683948	Gene ID= ENSG00000166821.8 TPM= 8.69 Transcript Type= protein_coding
chr15	89683080	89690662	89683080	89690662	-	ENST00000561257.1@PEX11A	ENST00000561257.1	protein_coding	89690577,89686431,89683080	89690662,89686546,89683855	Gene ID= ENSG00000166821.8 TPM= 1.93 Transcript Type= protein_coding
chr15	89748661	89751310	89748661	89751310	-	ENST00000300057.4@MESP1	ENST00000300057.4	protein_coding	89750509,89748661	89751310,89750227	Gene ID= ENSG00000166823.5 TPM= 17.38 Transcript Type= protein_coding
chr15	89784889	89814862	89784889	89814862	-	ENST00000300060.6@ANPEP	ENST00000300060.6	protein_coding	89814772,89805970,89805321,89805078,89804491,89804253,89803889,89803647,89803442,89803239,89801435,89801111,89799426,89799260,89797575,89793035,89792452,89792160,89790953,89790460,89784889	89814862,89806806,89805463,89805217,89804617,89804407,89804002,89803790,89803507,89803304,89801607,89801187,89799559,89799315,89797722,89793126,89792562,89792327,89791093,89790541,89785501	Gene ID= ENSG00000166825.13 TPM= 2.9 Transcript Type= protein_coding
chr15	89830599	89894342	89830599	89894342	-	ENST00000336418.8@AP3S2	ENST00000336418.8	protein_coding	89893881,89889049,89888521,89871475,89837615,89830599	89894342,89889140,89888632,89871546,89837722,89835643	Gene ID= ENSG00000157823.16 TPM= 34.27 Transcript Type= protein_coding
chr15	89834308	89912882	89834308	89912882	-	ENST00000398333.7@C15orf38-AP3S2	ENST00000398333.7	protein_coding	89912744,89910744,89908280,89903777,89903216,89889049,89888521,89871475,89837615,89834308	89912882,89910819,89908412,89903983,89903379,89889140,89888632,89871546,89837722,89835643	Gene ID= ENSG00000250021.7 TPM= 2.9 Transcript Type= protein_coding
chr15	90074512	90076644	90074512	90076644	-	ENST00000620791.1@ZNF710-AS1	ENST00000620791.1	antisense_RNA	90074512	90076644	Gene ID= ENSG00000259291.2 TPM= 6.76 Transcript Type= antisense_RNA
chr15	90083045	90102504	90083045	90102504	-	ENST00000330062.7@IDH2	ENST00000330062.7	protein_coding	90102276,90091553,90090479,90088587,90088359,90087439,90087112,90085275,90085001,90084816,90083045	90102504,90091644,90090644,90088747,90088502,90087575,90087263,90085387,90085098,90084908,90084353	Gene ID= ENSG00000182054.9 TPM= 225.4 Transcript Type= protein_coding
chr15	90083996	90102468	90083996	90102468	-	ENST00000560061.1@IDH2	ENST00000560061.1	protein_coding	90102276,90088587,90088359,90087439,90087112,90085275,90085001,90084816,90083996	90102468,90088747,90088502,90087575,90087263,90085387,90085098,90084908,90084353	Gene ID= ENSG00000182054.9 TPM= 7.79 Transcript Type= nonsense_mediated_decay
chr15	90184963	90229670	90184963	90229670	+	ENST00000332496.10@SEMA4B	ENST00000332496.10	protein_coding	90184963,90201458,90217439,90217767,90219793,90220982,90221367,90221614,90223559,90223838,90224968,90225282,90225661,90227557,90227904	90185081,90201735,90217602,90217829,90219891,90221093,90221480,90221765,90223740,90223988,90225178,90225397,90225827,90227642,90229670	Gene ID= ENSG00000185033.14 TPM= 3.86 Transcript Type= protein_coding
chr15	90229975	90234047	90229975	90234047	-	ENST00000328649.10@CIB1	ENST00000328649.10	protein_coding	90233835,90233669,90232219,90231357,90231095,90230934,90229975	90234047,90233703,90232327,90231507,90231213,90231022,90230505	Gene ID= ENSG00000185043.10 TPM= 50.2 Transcript Type= protein_coding
chr15	90230246	90234023	90230246	90234023	-	transcript2984.chr15.nnic@CIB1	transcript2984.chr15.nnic	protein_coding	90233919,90233669,90232219,90231357,90231095,90230934,90230246	90234023,90233703,90232327,90231507,90231213,90231022,90230505	Gene ID= ENSG00000185043.10 TPM= 1.93 Transcript Type= NA
chr15	90230246	90233941	90230246	90233941	-	transcript2986.chr15.nic@CIB1	transcript2986.chr15.nic	protein_coding	90233835,90232219,90231357,90231095,90230934,90230246	90233941,90233703,90231507,90231213,90231022,90230505	Gene ID= ENSG00000185043.10 TPM= 2.9 Transcript Type= NA
chr15	90352245	90362847	90352245	90362847	+	ENST00000354377.7@ZNF774	ENST00000354377.7	protein_coding	90352245,90354642,90358851,90360043	90352411,90354764,90358957,90362847	Gene ID= ENSG00000196391.10 TPM= 7.72 Transcript Type= protein_coding
chr15	90388218	90502243	90388218	90502243	+	ENST00000268182.9@IQGAP1	ENST00000268182.9	protein_coding	90388218,90390774,90426110,90429589,90433719,90439332,90440502,90441506,90443394,90448573,90449559,90452775,90453132,90454428,90456152,90466001,90466269,90467450,90472840,90473715,90473896,90474064,90474485,90476663,90477067,90477665,90481960,90482197,90483361,90484220,90486030,90486954,90487495,90491333,90492545,90494713,90497232,90499995	90388396,90390873,90426266,90429666,90433795,90439399,90440615,90441684,90443478,90448736,90449643,90452938,90453292,90454552,90456315,90466091,90466436,90467592,90473010,90473798,90473967,90474133,90474693,90476818,90477230,90477889,90482100,90482281,90483593,90484352,90486132,90487089,90487582,90491545,90492711,90494835,90497340,90502243	Gene ID= ENSG00000140575.12 TPM= 10.62 Transcript Type= protein_coding
chr15	90717327	90816165	90717327	90816165	+	ENST00000355112.7@BLM	ENST00000355112.7	protein_coding	90717327,90747389,90749367,90751787,90754811,90760147,90760594,90762966,90765296,90766910,90769133,90769438,90782822,90784921,90790649,90794167,90798190,90803521,90804167,90809137,90811205,90815102	90717440,90747490,90750067,90751946,90754938,90760279,90761255,90763157,90765414,90767023,90769231,90769586,90782928,90785081,90790844,90794357,90798337,90803720,90804359,90809259,90811406,90816165	Gene ID= ENSG00000197299.10 TPM= 2.9 Transcript Type= protein_coding
chr15	90871539	90883458	90871539	90883458	+	ENST00000610579.4@FURIN	ENST00000610579.4	protein_coding	90871539,90875582,90876255,90876462,90876896,90877135,90877527,90878132,90878764,90879444,90879671,90879867,90880094,90880691,90880930,90881286	90871605,90875917,90876353,90876557,90877024,90877211,90877615,90878304,90878976,90879544,90879774,90879984,90880273,90880815,90881040,90883458	Gene ID= ENSG00000140564.11 TPM= 87.84 Transcript Type= protein_coding
chr15	90884412	90895776	90884412	90895776	+	ENST00000328850.7@FES	ENST00000328850.7	protein_coding	90884412,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90890982,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884544,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891191,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 10.94 Transcript Type= protein_coding
chr15	90884504	90895776	90884504	90895776	+	transcript3039.chr15.nic@FES	transcript3039.chr15.nic	protein_coding	90884504,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90890982,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884639,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891191,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 4.18 Transcript Type= NA
chr15	90884413	90895776	90884413	90895776	+	transcript3042.chr15.nic@FES	transcript3042.chr15.nic	protein_coding	90884413,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884544,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 2.25 Transcript Type= NA
chr15	90902600	90921191	90902600	90921191	+	transcript3036.chr15.nic@MAN2A2	transcript3036.chr15.nic	protein_coding	90902600,90904190,90905251,90905579,90905845,90906370,90906740,90907309,90909327,90910090,90910501,90910847,90911171,90911385,90912043,90912542,90912877,90913273,90913614,90916123,90918194,90918645,90919635	90902975,90904339,90905508,90905723,90906016,90906497,90906913,90907495,90909504,90910292,90910683,90910961,90911238,90911550,90912279,90912664,90912991,90913406,90913755,90916256,90918388,90918755,90921191	Gene ID= ENSG00000196547.14 TPM= 45.37 Transcript Type= NA
chr15	90902695	90921191	90902695	90921191	+	ENST00000560451.5@MAN2A2	ENST00000560451.5	protein_coding	90902695,90904190,90905251,90905579,90905845,90906370,90906740,90907309,90909327,90910090,90910501,90910847,90911171,90911385,90912043,90912542,90912877,90913273,90913614,90916123,90918194,90918645,90919635	90902975,90904339,90905508,90905723,90906016,90906497,90906913,90907495,90909504,90910292,90910683,90910961,90911238,90911550,90912279,90912664,90912991,90913374,90913755,90916256,90918388,90918755,90921191	Gene ID= ENSG00000196547.14 TPM= 28.96 Transcript Type= nonsense_mediated_decay
chr15	90930925	90932546	90930925	90932546	-	ENST00000330334.7@HDDC3	ENST00000330334.7	protein_coding	90932429,90932055,90931704,90930925	90932546,90932110,90931944,90931556	Gene ID= ENSG00000184508.10 TPM= 1.93 Transcript Type= protein_coding
chr15	90930925	90932552	90930925	90932552	-	ENST00000494993.1@HDDC3	ENST00000494993.1	protein_coding	90932055,90931704,90930925	90932552,90931944,90931405	Gene ID= ENSG00000184508.10 TPM= 3.86 Transcript Type= retained_intron
chr15	90930180	90954093	90930180	90954093	+	ENST00000394275.6@UNC45A	ENST00000394275.6	protein_coding	90930180,90933977,90934339,90934944,90935544,90935946,90936285,90939731,90940306,90942437,90942912,90944892,90946614,90947796,90948142,90948654,90949316,90949654,90950154,90950500,90952929,90953155,90953459	90930255,90934143,90934549,90935330,90935705,90935982,90936460,90939823,90940473,90942605,90943082,90945063,90946914,90947890,90948283,90948794,90949443,90949720,90950267,90950615,90953046,90953310,90954093	Gene ID= ENSG00000140553.17 TPM= 14.48 Transcript Type= protein_coding
chr15	90954892	90962342	90954892	90962342	+	transcript3054.chr15.nic@RCCD1	transcript3054.chr15.nic	protein_coding	90954892,90955800,90956612,90957113,90957604,90959900,90960328,90961025,90961618	90954948,90955883,90956900,90957503,90957725,90959998,90960498,90961054,90962342	Gene ID= ENSG00000166965.12 TPM= 1.93 Transcript Type= NA
chr15	90954870	90963125	90954870	90963125	+	ENST00000394258.6@RCCD1	ENST00000394258.6	protein_coding	90954870,90956612,90957113,90957604,90959900,90960328,90961025,90961618	90954948,90956900,90957503,90957725,90959998,90960498,90961054,90963125	Gene ID= ENSG00000166965.12 TPM= 1.93 Transcript Type= protein_coding
chr15	90954884	90962347	90954884	90962347	+	transcript3057.chr15.nic@RCCD1	transcript3057.chr15.nic	protein_coding	90954884,90956612,90957113,90957604,90959900,90960328,90961025	90954948,90956900,90957503,90957725,90959998,90960498,90962347	Gene ID= ENSG00000166965.12 TPM= 1.93 Transcript Type= NA
chr15	90954881	90962324	90954881	90962324	+	ENST00000555155.5@RCCD1	ENST00000555155.5	protein_coding	90954881,90956612,90957113,90957604,90959900,90960334,90961025,90961618	90954948,90956900,90957503,90957725,90959998,90960498,90961054,90962324	Gene ID= ENSG00000166965.12 TPM= 7.72 Transcript Type= protein_coding
chr15	92617443	92655754	92617443	92655754	-	transcript3079.chr15.nnic@FAM174B	transcript3079.chr15.nnic	protein_coding	92655316,92654913,92630214,92617443	92655754,92654972,92630345,92619459	Gene ID= ENSG00000185442.12 TPM= 4.51 Transcript Type= NA
chr15	92617443	92655958	92617443	92655958	-	ENST00000327355.5@FAM174B	ENST00000327355.5	protein_coding	92655316,92630214,92617443	92655958,92630345,92619459	Gene ID= ENSG00000185442.12 TPM= 27.68 Transcript Type= protein_coding
chr15	92617448	92619865	92617448	92619865	-	transcript3083.chr15.nnic@FAM174B	transcript3083.chr15.nnic	protein_coding	92619707,92617448	92619865,92619459	Gene ID= ENSG00000185442.12 TPM= 4.51 Transcript Type= NA
chr15	92882707	92898072	92882707	92898072	+	transcript3086.chr15.nic@LINC01578	transcript3086.chr15.nic	processed_transcript	92882707,92883585,92885515,92886169,92892004,92897724	92883186,92883778,92885584,92886254,92892072,92898072	Gene ID= ENSG00000272888.5 TPM= 12.55 Transcript Type= NA
chr15	92882853	92885209	92882853	92885209	+	transcript3094.chr15.nnic@NA	transcript3094.chr15.nnic	NA	92882853	92885209	Gene ID= novel_gene_chr15_3095 TPM= 1.93 Transcript Type= NA
chr15	92900326	92997069	92900326	92997069	+	transcript3097.chr15.nic@CHD2	transcript3097.chr15.nic	protein_coding	92900326,92901167,92924321,92927244,92929030,92937518,92939578,92941822,92942843,92944415,92945821,92946038,92948952,92953357,92955423,92956459,92967325,92971765,92972265,92974879,92978234,92979135,92980815,92981365,92984330,92985498,92991476,92992859,92996957	92900824,92901299,92924552,92927330,92929091,92937625,92939718,92941955,92943068,92944515,92945865,92946216,92949076,92953573,92955512,92956649,92967513,92971927,92972417,92974950,92978383,92979283,92980911,92981457,92984500,92985673,92991517,92992998,92997069	Gene ID= ENSG00000173575.20 TPM= 2.41 Transcript Type= NA
chr15	92900335	92949234	92900335	92949234	+	ENST00000420239.6@CHD2	ENST00000420239.6	protein_coding	92900335,92901167,92924321,92927244,92929030,92937518,92939578,92941822,92942843,92944415,92945821,92946038,92948952	92900824,92901299,92924552,92927330,92929091,92937625,92939718,92941955,92943068,92944515,92945865,92946216,92949234	Gene ID= ENSG00000173575.20 TPM= 8.21 Transcript Type= protein_coding
chr15	93043416	93089346	93043416	93089346	-	transcript3103.chr15.nnic@RGMA	transcript3103.chr15.nnic	protein_coding	93088919,93072916,93051993,93043693,93043416	93089346,93073031,93052507,93045705,93043618	Gene ID= ENSG00000182175.13 TPM= 47.51 Transcript Type= NA
chr15	93043406	93088523	93043406	93088523	-	ENST00000543599.5@RGMA	ENST00000543599.5	protein_coding	93088281,93072916,93051993,93043406	93088523,93073031,93052507,93045705	Gene ID= ENSG00000182175.13 TPM= 88.62 Transcript Type= protein_coding
chr15	93043416	93089229	93043416	93089229	-	transcript3114.chr15.nnic@RGMA	transcript3114.chr15.nnic	protein_coding	93088919,93051993,93043416	93089229,93052507,93045705	Gene ID= ENSG00000182175.13 TPM= 71.08 Transcript Type= NA
chr15	93043419	93089249	93043419	93089249	-	transcript3116.chr15.nic@RGMA	transcript3116.chr15.nic	protein_coding	93088919,93072916,93043419	93089249,93073031,93045705	Gene ID= ENSG00000182175.13 TPM= 26.59 Transcript Type= NA
chr15	93043416	93073148	93043416	93073148	-	ENST00000542321.6@RGMA	ENST00000542321.6	protein_coding	93072916,93051993,93043416	93073148,93052507,93045705	Gene ID= ENSG00000182175.13 TPM= 91.51 Transcript Type= protein_coding
chr15	93064173	93065411	93064173	93065411	+	transcript3122.chr15.nnic@NA	transcript3122.chr15.nnic	NA	93064173	93065411	Gene ID= novel_gene_chr15_3123 TPM= 1.93 Transcript Type= NA
chr15	93086527	93087482	93086527	93087482	+	transcript3120.chr15.nnic@NA	transcript3120.chr15.nnic	NA	93086527	93087482	Gene ID= novel_gene_chr15_3121 TPM= 22.2 Transcript Type= NA
chr15	95276649	95327267	95276649	95327267	-	transcript3127.chr15.nic@LINC01197	transcript3127.chr15.nic	lincRNA	95326830,95289422,95288302,95276649	95327267,95289554,95288468,95277376	Gene ID= ENSG00000248441.6 TPM= 1.93 Transcript Type= NA
chr15	96330690	96331921	96330690	96331921	+	transcript3133.chr15.nnic@NA	transcript3133.chr15.nnic	NA	96330690	96331921	Gene ID= novel_gene_chr15_3134 TPM= 3.86 Transcript Type= NA
chr15	97960703	97973838	97960703	97973838	+	transcript3137.chr15.nnic@ARRDC4	transcript3137.chr15.nnic	protein_coding	97960703,97965895,97968014,97969123,97969883,97970589,97971131	97961168,97966042,97968116,97969379,97970045,97970743,97973838	Gene ID= ENSG00000140450.8 TPM= 2.9 Transcript Type= NA
chr15	97960698	97973838	97960698	97973838	+	ENST00000268042.6@ARRDC4	ENST00000268042.6	protein_coding	97960698,97965600,97965895,97968014,97969123,97969883,97970589,97971131	97961168,97965666,97966042,97968116,97969379,97970045,97970743,97973838	Gene ID= ENSG00000140450.8 TPM= 50.2 Transcript Type= protein_coding
chr15	98957152	98958732	98957152	98958732	+	transcript3150.chr15.nnic@NA	transcript3150.chr15.nnic	NA	98957152	98958732	Gene ID= novel_gene_chr15_3151 TPM= 1.93 Transcript Type= NA
chr15	98958539	99005581	98958539	99005581	-	transcript3142.chr15.nnic@PGPEP1L	transcript3142.chr15.nnic	protein_coding	99005429,99001187,98965989,98958539	99005581,99001279,98966070,98959850	Gene ID= ENSG00000183571.10 TPM= 2.9 Transcript Type= NA
chr15	98968230	99007795	98968230	99007795	-	ENST00000535714.1@PGPEP1L	ENST00000535714.1	protein_coding	99007359,99005429,98971036,98969425,98968230	99007795,99005656,98971158,98969651,98968697	Gene ID= ENSG00000183571.10 TPM= 3.86 Transcript Type= protein_coding
chr15	99105035	99135593	99105035	99135593	+	transcript3160.chr15.nnic@SYNM	transcript3160.chr15.nnic	protein_coding	99105035,99113591,99126722,99129367,99135376	99106009,99113715,99126792,99129710,99135593	Gene ID= ENSG00000182253.14 TPM= 11.83 Transcript Type= NA
chr15	99098217	99135593	99098217	99135593	+	ENST00000560674.5@SYNM	ENST00000560674.5	protein_coding	99098217,99113591,99126722,99129367,99132750	99098637,99113715,99126792,99131813,99135593	Gene ID= ENSG00000182253.14 TPM= 104.98 Transcript Type= protein_coding
chr15	99105035	99135589	99105035	99135589	+	ENST00000336292.10@SYNM	ENST00000336292.10	protein_coding	99105035,99113591,99126722,99129367	99106009,99113715,99126792,99135589	Gene ID= ENSG00000182253.14 TPM= 54.3 Transcript Type= protein_coding
chr15	99105080	99135583	99105080	99135583	+	ENST00000594047.2@SYNM	ENST00000594047.2	protein_coding	99105080,99113591,99126722,99129367,99132750	99106009,99113715,99126792,99131813,99135583	Gene ID= ENSG00000182253.14 TPM= 118.49 Transcript Type= protein_coding
chr15	99136230	99141711	99136230	99141711	+	transcript3176.chr15.nnic@NA	transcript3176.chr15.nnic	NA	99136230	99141711	Gene ID= novel_gene_chr15_3177 TPM= 5.79 Transcript Type= NA
chr15	99251362	99390729	99251362	99390729	+	ENST00000301981.7@LRRC28	ENST00000301981.7	protein_coding	99251362,99255898,99276576,99287257,99287814,99333923,99352369,99361336,99363106,99386030	99251541,99256125,99276616,99287294,99287951,99334129,99352471,99361511,99363265,99390729	Gene ID= ENSG00000168904.14 TPM= 5.79 Transcript Type= protein_coding
chr15	99251464	99386293	99251464	99386293	+	transcript3184.chr15.nnic@LRRC28	transcript3184.chr15.nnic	protein_coding	99251464,99255898,99287257,99287814,99333923,99352369,99361336,99363106,99364745,99386030	99251541,99256125,99287294,99287951,99334129,99352471,99361511,99363265,99364800,99386293	Gene ID= ENSG00000168904.14 TPM= 2.9 Transcript Type= NA
chr15	99251464	99386296	99251464	99386296	+	transcript3186.chr15.nnic@LRRC28	transcript3186.chr15.nnic	protein_coding	99251464,99255898,99276576,99287257,99287814,99352369,99361336,99363106,99386030	99251541,99256125,99276616,99287294,99287951,99352471,99361511,99363265,99386296	Gene ID= ENSG00000168904.14 TPM= 1.93 Transcript Type= NA
chr15	99251505	99386296	99251505	99386296	+	ENST00000447360.6@LRRC28	ENST00000447360.6	protein_coding	99251505,99255898,99276576,99287257,99287814,99333923,99352369,99361336,99386030	99251541,99256125,99276616,99287294,99287951,99334129,99352471,99361511,99386296	Gene ID= ENSG00000168904.14 TPM= 4.83 Transcript Type= protein_coding
chr15	99565994	99716349	99565994	99716349	+	transcript3193.chr15.nnic@MEF2A	transcript3193.chr15.nnic	protein_coding	99565994,99598430,99616431,99632978,99645561,99671323,99674393,99675399,99690241,99703362,99706729,99710634,99712390	99566104,99598511,99616464,99633173,99645764,99671454,99674612,99675458,99690428,99703385,99706855,99710760,99716349	Gene ID= ENSG00000068305.17 TPM= 3.22 Transcript Type= NA
chr15	99565981	99716406	99565981	99716406	+	transcript3213.chr15.nic@MEF2A	transcript3213.chr15.nic	protein_coding	99565981,99598430,99632978,99645561,99671520,99674393,99675399,99690241,99703362,99706729,99710634,99712390	99566104,99598511,99633173,99645764,99671657,99674612,99675458,99690428,99703385,99706855,99710760,99716406	Gene ID= ENSG00000068305.17 TPM= 7.09 Transcript Type= NA
chr15	99565985	99716349	99565985	99716349	+	transcript3225.chr15.nic@MEF2A	transcript3225.chr15.nic	protein_coding	99565985,99632978,99645561,99671323,99674393,99675399,99690241,99703362,99706729,99710634,99712390	99566104,99633173,99645764,99671454,99674612,99675458,99690428,99703385,99706855,99710760,99716349	Gene ID= ENSG00000068305.17 TPM= 2.45 Transcript Type= NA
chr15	99565985	99716406	99565985	99716406	+	transcript3229.chr15.nic@MEF2A	transcript3229.chr15.nic	protein_coding	99565985,99632978,99645561,99671520,99674393,99675399,99690241,99703362,99706729,99710634,99712390	99566104,99633173,99645764,99671657,99674612,99675458,99690428,99703385,99706855,99710760,99716406	Gene ID= ENSG00000068305.17 TPM= 7.76 Transcript Type= NA
chr15	99565980	99713782	99565980	99713782	+	ENST00000557785.5@MEF2A	ENST00000557785.5	protein_coding	99565980,99598430,99632978,99645561,99671323,99674393,99675399,99690241,99706729,99710634,99712390	99566104,99598511,99633173,99645764,99671454,99674612,99675458,99690428,99706855,99710760,99713782	Gene ID= ENSG00000068305.17 TPM= 1.93 Transcript Type= protein_coding
chr15	99566087	99716424	99566087	99716424	+	ENST00000557942.5@MEF2A	ENST00000557942.5	protein_coding	99566087,99598430,99632978,99645561,99671323,99674393,99675399,99690241,99703362,99706729,99710634,99712390	99566104,99598511,99633173,99645764,99671454,99674612,99675458,99690428,99703385,99706855,99710760,99716424	Gene ID= ENSG00000068305.17 TPM= 7.28 Transcript Type= protein_coding
chr15	99637119	99640194	99637119	99640194	-	transcript3252.chr15.nnic@NA	transcript3252.chr15.nnic	NA	99637119	99640194	Gene ID= novel_gene_chr15_3253 TPM= 2.9 Transcript Type= NA
chr15	99727405	99733421	99727405	99733421	-	ENST00000344791.6@LYSMD4	ENST00000344791.6	protein_coding	99733345,99732929,99731718,99731358,99731173,99727405	99733421,99733028,99732007,99731422,99731198,99729731	Gene ID= ENSG00000183060.15 TPM= 1.61 Transcript Type= protein_coding
chr15	99727405	99733440	99727405	99733440	-	transcript3243.chr15.nnic@LYSMD4	transcript3243.chr15.nnic	protein_coding	99733345,99731718,99731358,99727405	99733440,99732007,99731422,99729731	Gene ID= ENSG00000183060.15 TPM= 2.58 Transcript Type= NA
chr15	99727405	99733440	99727405	99733440	-	transcript3247.chr15.nnic@LYSMD4	transcript3247.chr15.nnic	protein_coding	99733345,99731718,99727405	99733440,99732007,99729724	Gene ID= ENSG00000183060.15 TPM= 10.3 Transcript Type= NA
chr15	100566914	100602240	100566914	100602240	-	ENST00000314742.12@LINS1	ENST00000314742.12	protein_coding	100602121,100580444,100580263,100574987,100573651,100571894,100566914	100602240,100580945,100580352,100575128,100574241,100572065,100570117	Gene ID= ENSG00000140471.16 TPM= 1.93 Transcript Type= protein_coding
chr15	100602534	100651705	100602534	100651705	+	ENST00000332783.11@ASB7	ENST00000332783.11	protein_coding	100602534,100603215,100609707,100612166,100629437,100648323	100603046,100603313,100609828,100612427,100630042,100651705	Gene ID= ENSG00000183475.12 TPM= 10.62 Transcript Type= protein_coding
chr15	100879376	100916626	100879376	100916626	+	ENST00000329841.9@ALDH1A3	ENST00000329841.9	protein_coding	100879376,100885267,100887572,100892510,100892945,100893954,100895933,100898083,100900575,100905523,100907121,100908408,100914701	100880006,100885371,100887712,100892639,100893006,100894082,100896046,100898185,100900759,100905687,100907278,100908482,100916626	Gene ID= ENSG00000184254.16 TPM= 57.44 Transcript Type= protein_coding
chr15	100879875	100916626	100879875	100916626	+	ENST00000346623.6@ALDH1A3	ENST00000346623.6	protein_coding	100879875,100885267,100887572,100895933,100898083,100900575,100905523,100907121,100908408,100914701	100880006,100885371,100887712,100896046,100898185,100900759,100905687,100907278,100908482,100916626	Gene ID= ENSG00000184254.16 TPM= 10.14 Transcript Type= protein_coding
chr15	100919215	101070112	100919215	101070112	+	ENST00000388948.7@LRRK1	ENST00000388948.7	protein_coding	100919215,100924511,100973804,100983528,100988634,100989250,101008837,101010450,101010674,101012008,101014316,101015326,101021053,101021845,101022383,101024803,101025965,101027261,101027638,101028956,101045981,101048494,101049644,101051711,101052922,101053223,101054946,101056856,101057990,101061171,101062574,101065352,101066640,101068671	100919451,100924729,100973967,100983699,100988813,100989398,101009063,101010577,101010837,101012145,101014428,101015402,101021182,101021957,101022597,101024967,101026137,101027381,101027797,101029232,101046152,101048657,101049783,101051960,101053088,101053420,101055223,101057050,101058141,101061288,101062690,101066205,101066741,101070112	Gene ID= ENSG00000154237.12 TPM= 1.93 Transcript Type= protein_coding
chr15	101175723	101251932	101175723	101251932	-	ENST00000254190.3@CHSY1	ENST00000254190.3	protein_coding	101251137,101235082,101175723	101251932,101235577,101178980	Gene ID= ENSG00000131873.5 TPM= 8.69 Transcript Type= protein_coding
chr15	101275100	101277500	101275100	101277500	-	ENST00000529968.1@SELENOS	ENST00000529968.1	protein_coding	101277342,101276541,101275100	101277500,101276675,101275361	Gene ID= ENSG00000131871.14 TPM= 10.62 Transcript Type= retained_intron
chr15	101272182	101277446	101272182	101277446	-	ENST00000526049.5@SELENOS	ENST00000526049.5	protein_coding	101277342,101276541,101275255,101274592,101274420,101272182	101277446,101276675,101275361,101274681,101274495,101272856	Gene ID= ENSG00000131871.14 TPM= 196.92 Transcript Type= protein_coding
chr15	101281514	101295282	101281514	101295282	-	ENST00000558036.5@SNRPA1	ENST00000558036.5	protein_coding	101295097,101293025,101291962,101287656,101285726,101284967,101281514	101295282,101293172,101292040,101287702,101287010,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 7.72 Transcript Type= retained_intron
chr15	101281510	101295251	101281510	101295251	-	ENST00000254193.10@SNRPA1	ENST00000254193.10	protein_coding	101295097,101293025,101291962,101287656,101286908,101286214,101285726,101284967,101281510	101295251,101293172,101292040,101287702,101287010,101286293,101285801,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 51.16 Transcript Type= protein_coding
chr15	101281514	101295204	101281514	101295204	-	ENST00000559309.5@SNRPA1	ENST00000559309.5	protein_coding	101295097,101293025,101291962,101287656,101286908,101285726,101284967,101281514	101295204,101293172,101292040,101287702,101287010,101285801,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 40.54 Transcript Type= nonsense_mediated_decay
chr15	101303928	101489839	101303928	101489839	-	ENST00000611716.4@PCSK6	ENST00000611716.4	protein_coding	101489374,101443556,101431990,101431320,101429987,101427892,101398404,101393212,101389464,101384322,101382092,101370335,101366196,101331852,101331651,101326377,101324850,101322520,101318319,101313376,101307213,101303928	101489839,101443660,101432100,101431463,101430063,101427980,101398576,101393424,101389564,101384425,101382209,101370523,101366332,101332031,101331689,101326479,101325046,101322607,101318422,101313505,101307325,101305355	Gene ID= ENSG00000140479.16 TPM= 8.37 Transcript Type= protein_coding
chr15	101303934	101328549	101303934	101328549	-	transcript3331.chr15.nnic@PCSK6	transcript3331.chr15.nnic	protein_coding	101326377,101324850,101322520,101318185,101313376,101307213,101303934	101328549,101325046,101322607,101318422,101313505,101307325,101305355	Gene ID= ENSG00000140479.16 TPM= 3.54 Transcript Type= NA
chr15	101303934	101489744	101303934	101489744	-	ENST00000618548.4@PCSK6	ENST00000618548.4	protein_coding	101489374,101443556,101431990,101431320,101429987,101427892,101398404,101393212,101389464,101384322,101382092,101370335,101366196,101331852,101326377,101324850,101322520,101318319,101313376,101307213,101303934	101489744,101443660,101432100,101431463,101430063,101427980,101398576,101393424,101389564,101384425,101382209,101370523,101366332,101332031,101326479,101325046,101322607,101318422,101313505,101307325,101305355	Gene ID= ENSG00000140479.16 TPM= 10.3 Transcript Type= protein_coding
chr15	101489458	101492215	101489458	101492215	+	transcript3342.chr15.nnic@NA	transcript3342.chr15.nnic	NA	101489458	101492215	Gene ID= novel_gene_chr15_3343 TPM= 4.83 Transcript Type= NA
chr15	101641846	101652391	101641846	101652391	-	ENST00000347970.7@TM2D3	ENST00000347970.7	protein_coding	101652271,101650004,101646725,101645087,101641846	101652391,101650161,101646899,101645162,101642644	Gene ID= ENSG00000184277.12 TPM= 20.27 Transcript Type= protein_coding
chr15	101641848	101652367	101641848	101652367	-	ENST00000333202.7@TM2D3	ENST00000333202.7	protein_coding	101652271,101651696,101650004,101646725,101645087,101641848	101652367,101651773,101650161,101646899,101645162,101642644	Gene ID= ENSG00000184277.12 TPM= 1.93 Transcript Type= protein_coding
chr15	101653598	101724604	101653598	101724604	-	ENST00000335968.7@TARSL2	ENST00000335968.7	protein_coding	101724091,101723093,101721126,101714840,101711880,101708793,101705683,101703859,101702239,101701086,101685896,101684075,101675600,101671671,101671486,101661712,101657785,101656922,101653598	101724604,101723164,101721322,101714963,101712001,101708910,101705747,101703937,101702385,101701184,101686062,101684237,101675737,101671748,101671586,101661816,101657857,101657036,101654730	Gene ID= ENSG00000185418.15 TPM= 6.76 Transcript Type= protein_coding
chr16	53829	57668	53829	57668	+	ENST00000383018.7@SNRNP25	ENST00000383018.7	protein_coding	53829,55459,55777,56539,57086	54058,55549,55882,56613,57668	Gene ID= ENSG00000161981.10 TPM= 58.88 Transcript Type= protein_coding
chr16	53010	57669	53010	57669	+	ENST00000293861.7@SNRNP25	ENST00000293861.7	protein_coding	53010,55459,55777,56539,57086	54058,55549,55882,56613,57669	Gene ID= ENSG00000161981.10 TPM= 7.72 Transcript Type= protein_coding
chr16	58062	72664	58062	72664	-	transcript7.chr16.nnic@RHBDF1	transcript7.chr16.nnic	protein_coding	72513,64899,64699,64333,63587,62973,62775,62538,61798,61585,61385,61120,60439,60216,59732,59419,59249,58974,58062	72664,65039,64829,64440,63800,63182,62897,62695,62052,61696,61459,61281,60539,60279,59826,59494,59349,59127,58759	Gene ID= ENSG00000007384.15 TPM= 13.51 Transcript Type= NA
chr16	58062	72664	58062	72664	-	transcript12.chr16.nnic@RHBDF1	transcript12.chr16.nnic	protein_coding	72513,64899,64699,64333,63587,62973,62775,62538,61798,61585,61385,60439,60216,59732,59419,59249,58974,58062	72664,65039,64829,64440,63800,63182,62897,62695,62052,61696,61459,60539,60279,59826,59494,59349,59127,58759	Gene ID= ENSG00000007384.15 TPM= 4.34 Transcript Type= NA
chr16	58059	72631	58059	72631	-	ENST00000262316.10@RHBDF1	ENST00000262316.10	protein_coding	72513,64899,64699,63587,62973,62775,62538,61798,61585,61385,61120,60439,60216,59732,59419,59249,58974,58059	72631,65039,64829,63800,63182,62897,62695,62052,61696,61459,61281,60539,60279,59826,59494,59349,59127,58759	Gene ID= ENSG00000007384.15 TPM= 11.1 Transcript Type= protein_coding
chr16	78063	85853	78063	85853	+	ENST00000356432.7@MPG	ENST00000356432.7	protein_coding	78063,79425,83052,85401	78333,79700,83256,85853	Gene ID= ENSG00000103152.11 TPM= 89.61 Transcript Type= protein_coding
chr16	78187	83755	78187	83755	+	transcript29.chr16.nic@MPG	transcript29.chr16.nic	protein_coding	78187,79425,83052	78333,79700,83755	Gene ID= ENSG00000103152.11 TPM= 2.9 Transcript Type= NA
chr16	78257	85842	78257	85842	+	ENST00000219431.4@MPG	ENST00000219431.4	protein_coding	78257,79139,79425,83052,85401	78333,79331,79700,83256,85842	Gene ID= ENSG00000103152.11 TPM= 15.28 Transcript Type= protein_coding
chr16	84271	86439	84271	86439	-	transcript31.chr16.nnic@NA	transcript31.chr16.nnic	NA	84271	86439	Gene ID= novel_gene_chr16_32 TPM= 3.21 Transcript Type= NA
chr16	84271	138638	84271	138638	-	transcript20.chr16.nic@NPRL3	transcript20.chr16.nic	protein_coding	138150,130522,119126,117301,112622,110525,100372,98145,93219,92596,89713,88698,86668,84271	138638,130591,119255,117375,112775,110606,100509,98301,93325,92725,89902,88890,86870,84595	Gene ID= ENSG00000103148.15 TPM= 13.83 Transcript Type= NA
chr16	84271	138397	84271	138397	-	transcript21.chr16.nic@NPRL3	transcript21.chr16.nic	protein_coding	138150,130522,119126,112622,110525,100372,98145,93219,92596,89713,88698,86668,84271	138397,130591,119255,112775,110606,100509,98301,93325,92725,89902,88890,86870,84595	Gene ID= ENSG00000103148.15 TPM= 10.94 Transcript Type= NA
chr16	85801	125097	85801	125097	-	transcript23.chr16.nnic@NPRL3	transcript23.chr16.nnic	protein_coding	124937,119126,117301,112622,110525,100372,98145,93221,92596,89713,88698,85801	125097,119255,117375,112775,110606,100509,98301,93325,92735,89902,88890,86870	Gene ID= ENSG00000103148.15 TPM= 8.69 Transcript Type= NA
chr16	172847	173710	172847	173710	+	ENST00000251595.10@HBA2	ENST00000251595.10	protein_coding	172847,173125,173472	173007,173329,173710	Gene ID= ENSG00000188536.12 TPM= 10.62 Transcript Type= protein_coding
chr16	176680	177522	176680	177522	+	ENST00000320868.9@HBA1	ENST00000320868.9	protein_coding	176680,176929,177283	176811,177133,177522	Gene ID= ENSG00000206172.8 TPM= 4.83 Transcript Type= protein_coding
chr16	188971	229451	188971	229451	-	transcript37.chr16.nic@LUC7L	transcript37.chr16.nic	protein_coding	229279,228333,227242,220649,208078,206004,199062,192927,190541,189931,188971	229451,228402,227336,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 2.65 Transcript Type= NA
chr16	188975	229450	188975	229450	-	ENST00000629543.2@LUC7L	ENST00000629543.2	protein_coding	229279,228333,227242,220649,208078,206004,199062,192927,190541,189968,188975	229450,228402,227336,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 1.69 Transcript Type= protein_coding
chr16	188971	229463	188971	229463	-	ENST00000397783.5@LUC7L	ENST00000397783.5	protein_coding	229279,227242,220649,208078,206004,199062,192927,190541,189931,188971	229463,227336,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 3.62 Transcript Type= protein_coding
chr16	188990	229412	188990	229412	-	transcript40.chr16.nic@LUC7L	transcript40.chr16.nic	protein_coding	227242,220649,208601,208078,206004,199062,192927,190541,189968,188990	229412,220747,208664,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 1.93 Transcript Type= NA
chr16	188969	229450	188969	229450	-	ENST00000293872.12@LUC7L	ENST00000293872.12	protein_coding	229279,227242,220649,208078,206004,199062,192927,190541,189968,188969	229450,227336,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 6.52 Transcript Type= protein_coding
chr16	188990	229451	188990	229451	-	transcript42.chr16.nic@LUC7L	transcript42.chr16.nic	protein_coding	229279,227242,220649,208078,206004,199062,192927,190541,189968,188990	229451,228402,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 4.83 Transcript Type= NA
chr16	234546	266125	234546	266125	+	ENST00000399932.7@FAM234A	ENST00000399932.7	protein_coding	234546,249549,254381,259483,259969,261384,262093,262424,263262,263700,264016,264614,264811	234857,249654,254681,259599,260160,261514,262225,262553,263402,263775,264171,264716,266125	Gene ID= ENSG00000167930.15 TPM= 137.72 Transcript Type= protein_coding
chr16	287440	352693	287440	352693	-	transcript73.chr16.nic@AXIN1	transcript73.chr16.nic	protein_coding	352369,314543,309973,304304,297722,297056,293488,291190,289440,287440	352693,314683,310069,304441,298251,297226,293718,291297,289607,288248	Gene ID= ENSG00000103126.14 TPM= 5.63 Transcript Type= NA
chr16	287440	352693	287440	352693	-	transcript76.chr16.nic@AXIN1	transcript76.chr16.nic	protein_coding	352369,314543,309973,304304,297722,297056,293488,289440,287440	352693,314683,310069,304441,298251,297226,293718,289607,288248	Gene ID= ENSG00000103126.14 TPM= 6.59 Transcript Type= NA
chr16	287441	352449	287441	352449	-	ENST00000354866.7@AXIN1	ENST00000354866.7	protein_coding	352369,346148,314543,309973,304304,297722,297056,293488,289440,287441	352449,347106,314683,310069,304441,298251,297226,293718,289607,288248	Gene ID= ENSG00000103126.14 TPM= 6.27 Transcript Type= protein_coding
chr16	287440	352659	287440	352659	-	ENST00000262320.7@AXIN1	ENST00000262320.7	protein_coding	352369,346148,314543,309973,304304,297722,297056,293488,291190,289440,287440	352659,347106,314683,310069,304441,298251,297226,293718,291297,289607,288248	Gene ID= ENSG00000103126.14 TPM= 27.83 Transcript Type= protein_coding
chr16	367394	370496	367394	370496	-	transcript83.chr16.nic@MRPL28	transcript83.chr16.nic	protein_coding	370444,369931,369068,368501,368328,367394	370496,370225,369220,368635,368414,367782	Gene ID= ENSG00000086504.15 TPM= 9.97 Transcript Type= NA
chr16	367384	370527	367384	370527	-	ENST00000199706.12@MRPL28	ENST00000199706.12	protein_coding	370499,369931,369068,368501,368328,367384	370527,370225,369220,368635,368414,367782	Gene ID= ENSG00000086504.15 TPM= 67.89 Transcript Type= protein_coding
chr16	367384	370509	367384	370509	-	ENST00000483764.5@MRPL28	ENST00000483764.5	protein_coding	370499,369931,368501,368328,367384	370509,370225,369220,368414,367782	Gene ID= ENSG00000086504.15 TPM= 5.15 Transcript Type= retained_intron
chr16	371864	381971	371864	381971	-	transcript95.chr16.nnic@TMEM8A	transcript95.chr16.nnic	protein_coding	381701,377378,377037,376544,376136,375345,375133,374756,374221,374005,372611,371864	381971,377585,377164,376812,376455,375435,375256,374892,374399,374151,372727,372283	Gene ID= ENSG00000129925.10 TPM= 2.41 Transcript Type= NA
chr16	371865	382010	371865	382010	-	transcript96.chr16.nic@TMEM8A	transcript96.chr16.nic	protein_coding	381701,377671,377378,377037,376544,376136,375345,375133,374756,374221,374005,371865	382010,377848,377585,377164,376812,376455,375435,375256,374892,374399,374151,372727	Gene ID= ENSG00000129925.10 TPM= 2.41 Transcript Type= NA
chr16	370773	381982	370773	381982	-	ENST00000431232.6@TMEM8A	ENST00000431232.6	protein_coding	381701,377671,377378,377037,376544,376136,375345,375133,374756,374221,374005,372611,370773	381982,377848,377585,377164,376812,376455,375435,375256,374892,374399,374151,372727,372283	Gene ID= ENSG00000129925.10 TPM= 9.65 Transcript Type= protein_coding
chr16	397192	400753	397192	400753	+	ENST00000620944.4@NME4	ENST00000620944.4	protein_coding	397192,398208,398990,399379,399627,400219	397313,398394,399123,399480,399739,400753	Gene ID= ENSG00000103202.12 TPM= 2.41 Transcript Type= protein_coding
chr16	397209	400759	397209	400759	+	ENST00000219479.6@NME4	ENST00000219479.6	protein_coding	397209,398990,399379,399627,400219	397313,399123,399480,399739,400759	Gene ID= ENSG00000103202.12 TPM= 5.31 Transcript Type= protein_coding
chr16	401826	412487	401826	412487	+	ENST00000219481.9@DECR2	ENST00000219481.9	protein_coding	401826,404956,406346,407425,410243,410691,410972,411361,411890	402043,405024,406397,407560,410367,410784,411076,411578,412487	Gene ID= ENSG00000242612.6 TPM= 82.05 Transcript Type= protein_coding
chr16	401834	412481	401834	412481	+	transcript105.chr16.nic@DECR2	transcript105.chr16.nic	protein_coding	401834,404956,406346,407425,410243,410691,410972,411890	402043,405024,406397,407560,410367,410784,411578,412481	Gene ID= ENSG00000242612.6 TPM= 9.65 Transcript Type= NA
chr16	425602	522478	425602	522478	+	transcript132.chr16.nnic@RAB11FIP3	transcript132.chr16.nnic	protein_coding	425602,461404,471295,488851,491134,496824,503004,505524,510660,518943,519754,520122,520459,520726	426720,461497,471389,489000,491268,496859,503097,505627,510800,519024,519891,520277,520599,522478	Gene ID= ENSG00000090565.15 TPM= 23.41 Transcript Type= NA
chr16	425602	497448	425602	497448	+	transcript138.chr16.nic@RAB11FIP3	transcript138.chr16.nic	protein_coding	425602,461404,471295,482525,488851,491134,496824,497292	426720,461497,471389,482736,489000,491268,496859,497448	Gene ID= ENSG00000090565.15 TPM= 15.64 Transcript Type= NA
chr16	425619	523011	425619	523011	+	ENST00000262305.8@RAB11FIP3	ENST00000262305.8	protein_coding	425619,461404,471295,482525,488851,496824,503004,505524,510660,518943,519754,520122,520459,520726	426720,461497,471389,482736,489000,496859,503097,505627,510800,519024,519891,520277,520599,523011	Gene ID= ENSG00000090565.15 TPM= 14.72 Transcript Type= protein_coding
chr16	522190	527397	522190	527397	-	transcript146.chr16.nnic@NA	transcript146.chr16.nnic	NA	522190	527397	Gene ID= novel_gene_chr16_147 TPM= 6.76 Transcript Type= NA
chr16	525155	527407	525155	527407	-	ENST00000622160.1@Z98882.1	ENST00000622160.1	lincRNA	525155	527407	Gene ID= ENSG00000277142.1 TPM= 7.72 Transcript Type= lincRNA
chr16	538948	543568	538948	543568	-	transcript149.chr16.nnic@NA	transcript149.chr16.nnic	NA	538948	543568	Gene ID= novel_gene_chr16_150 TPM= 6.76 Transcript Type= NA
chr16	569938	584109	569938	584109	+	transcript156.chr16.nic@PIGQ	transcript156.chr16.nic	protein_coding	569938,574066,575839,576134,578379,579069,580183,580858,582883	570096,574763,575970,576254,578505,579180,580263,580972,584109	Gene ID= ENSG00000007541.16 TPM= 1.93 Transcript Type= NA
chr16	579041	584108	579041	584108	+	transcript161.chr16.nic@PIGQ	transcript161.chr16.nic	protein_coding	579041,580183,580858,581199,582248,582883	579180,580263,580972,581341,582309,584108	Gene ID= ENSG00000007541.16 TPM= 15.44 Transcript Type= NA
chr16	569947	584136	569947	584136	+	ENST00000321878.9@PIGQ	ENST00000321878.9	protein_coding	569947,574066,575839,576134,578379,578785,579069,580183,580858,582248,582883	570096,574763,575970,576254,578505,578938,579180,580263,580972,582309,584136	Gene ID= ENSG00000007541.16 TPM= 25.1 Transcript Type= protein_coding
chr16	570018	584109	570018	584109	+	ENST00000026218.9@PIGQ	ENST00000026218.9	protein_coding	570018,574066,575839,576134,578379,578785,579069,580183,580858,582883	570096,574763,575970,576254,578505,578938,579180,580263,580972,584109	Gene ID= ENSG00000007541.16 TPM= 5.79 Transcript Type= protein_coding
chr16	569976	577234	569976	577234	+	ENST00000422307.6@PIGQ	ENST00000422307.6	protein_coding	569976,574066,575839,576134	570096,574763,575970,577234	Gene ID= ENSG00000007541.16 TPM= 1.93 Transcript Type= protein_coding
chr16	581762	583473	581762	583473	-	transcript178.chr16.nnic@NA	transcript178.chr16.nnic	NA	581762	583473	Gene ID= novel_gene_chr16_179 TPM= 11.58 Transcript Type= NA
chr16	587772	589271	587772	589271	-	transcript176.chr16.nnic@NA	transcript176.chr16.nnic	NA	587772	589271	Gene ID= novel_gene_chr16_177 TPM= 11.58 Transcript Type= NA
chr16	589669	629271	589669	629271	+	ENST00000539661.5@RAB40C	ENST00000539661.5	protein_coding	589669,590261,617208,618200,625432,625899,627342	589751,590433,617268,618260,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 2.77 Transcript Type= protein_coding
chr16	594819	629271	594819	629271	+	transcript160.chr16.nnic@RAB40C	transcript160.chr16.nnic	protein_coding	594819,596317,617208,618200,625432,625899,627342	595567,596448,617268,618260,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 3.89 Transcript Type= NA
chr16	590089	629272	590089	629272	+	ENST00000248139.7@RAB40C	ENST00000248139.7	protein_coding	590089,617208,618200,625432,625899,627342	590433,617268,618260,625509,626121,629272	Gene ID= ENSG00000197562.9 TPM= 20.44 Transcript Type= protein_coding
chr16	590079	629271	590079	629271	+	transcript170.chr16.nnic@RAB40C	transcript170.chr16.nnic	protein_coding	590079,625432,625899,627342	590433,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 4.86 Transcript Type= NA
chr16	590079	629271	590079	629271	+	transcript174.chr16.nnic@RAB40C	transcript174.chr16.nnic	protein_coding	590079,625432,627342	590433,626121,629271	Gene ID= ENSG00000197562.9 TPM= 3.89 Transcript Type= NA
chr16	590077	629271	590077	629271	+	ENST00000538492.5@RAB40C	ENST00000538492.5	protein_coding	590077,590261,617208,618200,625432,625899,627342	590119,590433,617268,618260,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 6.63 Transcript Type= protein_coding
chr16	634430	636302	634430	636302	-	ENST00000397666.6@METTL26	ENST00000397666.6	protein_coding	636094,635612,635281,634719,634430	636302,635774,635340,634797,634644	Gene ID= ENSG00000130731.15 TPM= 19.47 Transcript Type= protein_coding
chr16	634430	636302	634430	636302	-	ENST00000301686.12@METTL26	ENST00000301686.12	protein_coding	636094,635612,635281,634889,634719,634430	636302,635774,635340,634956,634797,634644	Gene ID= ENSG00000130731.15 TPM= 25.26 Transcript Type= protein_coding
chr16	634438	636351	634438	636351	-	ENST00000397664.8@METTL26	ENST00000397664.8	protein_coding	636094,635281,634719,634438	636351,635340,634797,634644	Gene ID= ENSG00000130731.15 TPM= 6.44 Transcript Type= protein_coding
chr16	641828	648471	641828	648471	+	transcript194.chr16.nic@MCRIP2	transcript194.chr16.nic	protein_coding	641828,642120,646472,647417,647783	642043,642249,646608,647544,648471	Gene ID= ENSG00000172366.19 TPM= 4.83 Transcript Type= NA
chr16	641833	648474	641833	648474	+	transcript196.chr16.nic@MCRIP2	transcript196.chr16.nic	protein_coding	641833,642120,646472,647417,648120	642043,642249,646608,647884,648474	Gene ID= ENSG00000172366.19 TPM= 2.9 Transcript Type= NA
chr16	641828	648474	641828	648474	+	transcript198.chr16.nnic@MCRIP2	transcript198.chr16.nnic	protein_coding	641828,646472,647417,647783,648120	642043,646608,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 3.21 Transcript Type= NA
chr16	646747	648474	646747	648474	+	ENST00000575894.1@MCRIP2	ENST00000575894.1	protein_coding	646747	648474	Gene ID= ENSG00000172366.19 TPM= 1.93 Transcript Type= retained_intron
chr16	641813	648474	641813	648474	+	ENST00000307650.8@MCRIP2	ENST00000307650.8	protein_coding	641813,642120,647417,647783,648120	642043,642249,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 41.83 Transcript Type= protein_coding
chr16	641846	648474	641846	648474	+	ENST00000491999.5@MCRIP2	ENST00000491999.5	protein_coding	641846,642120,646472,647417,647783,648120	642043,642249,646608,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 37.97 Transcript Type= nonsense_mediated_decay
chr16	641929	648474	641929	648474	+	ENST00000474840.5@MCRIP2	ENST00000474840.5	protein_coding	641929,642120,647783,648120	642043,642249,647884,648474	Gene ID= ENSG00000172366.19 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr16	643542	645408	643542	645408	-	transcript204.chr16.nnic@NA	transcript204.chr16.nnic	NA	643542	645408	Gene ID= novel_gene_chr16_205 TPM= 25.1 Transcript Type= NA
chr16	648456	649239	648456	649239	-	transcript206.chr16.nnic@NA	transcript206.chr16.nnic	NA	648456	649239	Gene ID= novel_gene_chr16_207 TPM= 1.93 Transcript Type= NA
chr16	663405	664176	663405	664176	-	transcript211.chr16.nnic@NA	transcript211.chr16.nnic	NA	663405	664176	Gene ID= novel_gene_chr16_212 TPM= 1.93 Transcript Type= NA
chr16	668086	674174	668086	674174	+	ENST00000315082.8@RHOT2	ENST00000315082.8	protein_coding	668086,668353,668488,668656,669553,670123,670249,670456,670675,670892,671083,671697,671860,672084,672254,672489,672703,672928,673480	668236,668411,668569,668699,669606,670175,670357,670557,670773,671000,671203,671781,672002,672181,672384,672566,672825,673130,674174	Gene ID= ENSG00000140983.13 TPM= 59.77 Transcript Type= protein_coding
chr16	668100	674125	668100	674125	+	transcript221.chr16.nic@RHOT2	transcript221.chr16.nic	protein_coding	668100,668353,668488,668656,669553,670123,670249,670456,670675,670892,671697,671860,672084,672254,672489,672703,672928,673480	668236,668411,668569,668699,669606,670175,670357,670557,670773,671203,671781,672002,672181,672384,672566,672825,673130,674125	Gene ID= ENSG00000140983.13 TPM= 11.02 Transcript Type= NA
chr16	668100	674125	668100	674125	+	transcript232.chr16.nic@RHOT2	transcript232.chr16.nic	protein_coding	668100,668353,668488,668656,669553,670123,670249,670456,670675,670892,671115,671697,671860,672084,672254,672928,673480	668236,668411,668569,668699,669606,670175,670357,670557,670773,671000,671203,671781,672002,672181,672825,673130,674125	Gene ID= ENSG00000140983.13 TPM= 4.23 Transcript Type= NA
chr16	668100	674125	668100	674125	+	transcript236.chr16.nic@RHOT2	transcript236.chr16.nic	protein_coding	668100,668353,668488,668656,670123,670249,670456,670675,670892,671697,671860,672084,672254,672489,672703,672928,673480	668236,668411,668569,668699,670175,670357,670557,670773,671203,671781,672002,672181,672384,672566,672825,673130,674125	Gene ID= ENSG00000140983.13 TPM= 6.2 Transcript Type= NA
chr16	680392	682746	680392	682746	+	transcript263.chr16.nic@STUB1	transcript263.chr16.nic	protein_coding	680392,681152,681438,681793,682020,682165,682364	680684,681350,681603,681903,682076,682281,682746	Gene ID= ENSG00000103266.10 TPM= 10.81 Transcript Type= NA
chr16	680408	682746	680408	682746	+	transcript264.chr16.nic@STUB1	transcript264.chr16.nic	protein_coding	680408,681209,681438,681793,682020,682165,682364	680684,681350,681603,681880,682076,682281,682746	Gene ID= ENSG00000103266.10 TPM= 12.74 Transcript Type= NA
chr16	680224	682746	680224	682746	+	ENST00000565677.5@STUB1	ENST00000565677.5	protein_coding	680224,681063,681438,681793,682020,682165,682364	680684,681350,681603,681880,682076,682281,682746	Gene ID= ENSG00000103266.10 TPM= 4.05 Transcript Type= protein_coding
chr16	681671	684439	681671	684439	-	ENST00000412368.6@JMJD8	ENST00000412368.6	protein_coding	684234,684066,683861,683685,683530,683322,683167,682953,681671	684439,684155,683909,683781,683598,683441,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 24.62 Transcript Type= protein_coding
chr16	681671	684528	681671	684528	-	ENST00000567120.5@JMJD8	ENST00000567120.5	protein_coding	684066,683861,683685,683530,683322,683167,682953,681671	684528,683909,683781,683598,683441,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 2.9 Transcript Type= retained_intron
chr16	681671	684356	681671	684356	-	transcript258.chr16.nic@JMJD8	transcript258.chr16.nic	protein_coding	684234,683861,683685,683530,683322,683167,682953,681671	684356,684155,683781,683598,683441,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 8.69 Transcript Type= NA
chr16	681671	684354	681671	684354	-	transcript269.chr16.nic@JMJD8	transcript269.chr16.nic	protein_coding	684066,683861,683685,683322,683167,682953,681671	684354,683909,683781,683598,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 6.76 Transcript Type= NA
chr16	681671	684356	681671	684356	-	transcript272.chr16.nic@JMJD8	transcript272.chr16.nic	protein_coding	684234,683910,683685,683322,683167,682953,681671	684356,684155,683781,683598,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 3.86 Transcript Type= NA
chr16	681671	684354	681671	684354	-	transcript278.chr16.nic@JMJD8	transcript278.chr16.nic	protein_coding	683861,683685,683322,683167,682953,681671	684354,683781,683598,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 4.83 Transcript Type= NA
chr16	681699	684344	681699	684344	-	ENST00000568689.5@JMJD8	ENST00000568689.5	protein_coding	684234,684066,683861,683685,683322,683167,682958,681699	684344,684155,683909,683781,683598,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 10.14 Transcript Type= retained_intron
chr16	684622	690430	684622	690430	-	transcript289.chr16.nic@WDR24	transcript289.chr16.nic	protein_coding	689160,687562,686744,686068,685869,685679,684992,684622	690430,687739,687416,686186,685990,685783,685597,684902	Gene ID= ENSG00000127580.15 TPM= 1.93 Transcript Type= NA
chr16	684622	690400	684622	690400	-	ENST00000293883.8@WDR24	ENST00000293883.8	protein_coding	689160,687562,686744,686068,685869,685679,685257,684992,684622	690400,687739,687416,686186,685990,685783,685597,685176,684902	Gene ID= ENSG00000127580.15 TPM= 49.23 Transcript Type= protein_coding
chr16	715100	717479	715100	717479	+	transcript301.chr16.nnic@METRN	transcript301.chr16.nnic	protein_coding	715100,715584,716943	715393,715984,717479	Gene ID= ENSG00000103260.8 TPM= 3.86 Transcript Type= NA
chr16	720975	722601	720975	722601	+	ENST00000569529.5@FAM173A	ENST00000569529.5	protein_coding	720975,721598,721801,722084,722309	721436,721702,721941,722134,722601	Gene ID= ENSG00000103254.9 TPM= 21.07 Transcript Type= protein_coding
chr16	721144	722590	721144	722590	+	transcript307.chr16.nic@FAM173A	transcript307.chr16.nic	protein_coding	721144,721801,722084,722309	721702,721941,722134,722590	Gene ID= ENSG00000103254.9 TPM= 5.63 Transcript Type= NA
chr16	721144	722588	721144	722588	+	transcript310.chr16.nic@FAM173A	transcript310.chr16.nic	protein_coding	721144,721801	721702,722588	Gene ID= ENSG00000103254.9 TPM= 3.21 Transcript Type= NA
chr16	721142	722573	721142	722573	+	ENST00000219535.7@FAM173A	ENST00000219535.7	protein_coding	721142,721598,721801,722309	721436,721702,721941,722573	Gene ID= ENSG00000103254.9 TPM= 6.76 Transcript Type= protein_coding
chr16	729766	741002	729766	741002	-	transcript314.chr16.nic@NARFL	transcript314.chr16.nic	protein_coding	740920,740022,739643,737186,736266,734737,734229,733298,732301,731565,730843,729766	741002,740103,739738,737329,736398,734871,734347,733427,732373,731702,731000,730655	Gene ID= ENSG00000103245.13 TPM= 9.82 Transcript Type= NA
chr16	729766	741009	729766	741009	-	transcript319.chr16.nic@NARFL	transcript319.chr16.nic	protein_coding	740920,739643,737186,736266,733298,732301,731565,730843,729766	741009,739738,737329,736398,734871,732373,731702,731000,730655	Gene ID= ENSG00000103245.13 TPM= 5.47 Transcript Type= NA
chr16	729753	741002	729753	741002	-	ENST00000251588.6@NARFL	ENST00000251588.6	protein_coding	740920,739643,737186,736266,734737,734229,733298,732301,731565,730843,729753	741002,739738,737329,736398,734871,734347,733427,732373,731702,731000,730655	Gene ID= ENSG00000103245.13 TPM= 46.5 Transcript Type= protein_coding
chr16	784974	788383	784974	788383	-	ENST00000007264.6@RPUSD1	ENST00000007264.6	protein_coding	788256,787556,787354,787077,786827,784974	788383,787744,787477,787179,786928,786377	Gene ID= ENSG00000007376.7 TPM= 11.1 Transcript Type= protein_coding
chr16	784991	788371	784991	788371	-	ENST00000565809.5@RPUSD1	ENST00000565809.5	protein_coding	788256,787556,787354,786827,784991	788371,787744,787477,786928,786377	Gene ID= ENSG00000007376.7 TPM= 1.45 Transcript Type= protein_coding
chr16	788622	798074	788622	798074	+	ENST00000262315.13@CHTF18	ENST00000262315.13	protein_coding	788622,788931,789210,789547,790177,790347,790525,791161,791851,792224,792439,792718,792966,793144,794054,795132,795685,795947,796717,796961,797694,797839	788775,789125,789360,789715,790269,790399,790666,791370,791948,792347,792590,792811,793064,793274,794201,795356,795834,796077,796861,797092,797751,798074	Gene ID= ENSG00000127586.16 TPM= 2.9 Transcript Type= protein_coding
chr16	853634	970999	853634	970999	-	ENST00000262301.15@LMF1	ENST00000262301.15	protein_coding	970788,954357,934244,910931,893007,879570,871161,870729,869883,868944,853634	970999,954666,934254,911079,893072,879737,871341,870882,870066,869056,854706	Gene ID= ENSG00000103227.18 TPM= 2.9 Transcript Type= protein_coding
chr16	975761	981503	975761	981503	-	transcript338.chr16.nic@AC009041.2	transcript338.chr16.nic	lincRNA	979601,979025,975761	981503,979110,977093	Gene ID= ENSG00000260807.6 TPM= 2.9 Transcript Type= NA
chr16	981808	986979	981808	986979	+	ENST00000293894.3@SOX8	ENST00000293894.3	protein_coding	981808,983728,984701	982344,983960,986979	Gene ID= ENSG00000005513.9 TPM= 2.9 Transcript Type= protein_coding
chr16	1240696	1242554	1240696	1242554	+	ENST00000338844.7@TPSAB1	ENST00000338844.7	protein_coding	1240696,1240939,1241153,1241434,1241827,1242076	1240728,1240999,1241324,1241699,1241990,1242554	Gene ID= ENSG00000172236.16 TPM= 14 Transcript Type= protein_coding
chr16	1240706	1242554	1240706	1242554	+	transcript342.chr16.nnic@TPSAB1	transcript342.chr16.nnic	protein_coding	1240706,1240939,1241153,1241434,1241827,1242076	1240799,1240999,1241324,1241699,1241990,1242554	Gene ID= ENSG00000172236.16 TPM= 7.24 Transcript Type= NA
chr16	1309635	1327018	1309635	1327018	+	ENST00000397515.6@UBE2I	ENST00000397515.6	protein_coding	1309635,1312347,1314020,1314293,1315654,1320174,1320438,1324730	1309773,1312603,1314096,1314376,1315726,1320283,1320517,1327018	Gene ID= ENSG00000103275.19 TPM= 8.21 Transcript Type= protein_coding
chr16	1309510	1327017	1309510	1327017	+	ENST00000397514.7@UBE2I	ENST00000397514.7	protein_coding	1309510,1314020,1314293,1315654,1320174,1320438,1324730	1309773,1314096,1314376,1315726,1320283,1320517,1327017	Gene ID= ENSG00000103275.19 TPM= 60.33 Transcript Type= protein_coding
chr16	1309644	1325350	1309644	1325350	+	transcript348.chr16.nic@UBE2I	transcript348.chr16.nic	protein_coding	1309644,1314020,1314293,1315654,1320174,1320438,1324730	1312603,1314096,1314376,1315726,1320283,1320517,1325350	Gene ID= ENSG00000103275.19 TPM= 1.93 Transcript Type= NA
chr16	1309636	1317125	1309636	1317125	+	ENST00000473256.6@UBE2I	ENST00000473256.6	protein_coding	1309636,1314020,1314293,1315654	1309773,1314096,1314376,1317125	Gene ID= ENSG00000103275.19 TPM= 1.93 Transcript Type= retained_intron
chr16	1349240	1351911	1349240	1351911	-	ENST00000007390.2@TSR3	ENST00000007390.2	protein_coding	1351693,1351379,1350807,1350058,1349889,1349240	1351911,1351598,1351000,1350234,1349952,1349608	Gene ID= ENSG00000007520.3 TPM= 137.07 Transcript Type= protein_coding
chr16	1351923	1364113	1351923	1364113	+	ENST00000204679.8@GNPTG	ENST00000204679.8	protein_coding	1351923,1352102,1352239,1361743,1361872,1362038,1362206,1362452,1362611,1362825,1362997	1352017,1352159,1352306,1361797,1361955,1362131,1362320,1362534,1362742,1362906,1364113	Gene ID= ENSG00000090581.9 TPM= 41.99 Transcript Type= protein_coding
chr16	1351928	1363350	1351928	1363350	+	transcript365.chr16.nic@GNPTG	transcript365.chr16.nic	protein_coding	1351928,1352102,1352239,1361743,1361872,1362038,1362206,1362452,1362825,1362997	1352017,1352159,1352306,1361797,1361955,1362131,1362320,1362742,1362906,1363350	Gene ID= ENSG00000090581.9 TPM= 3.38 Transcript Type= NA
chr16	1351928	1363350	1351928	1363350	+	transcript367.chr16.nic@GNPTG	transcript367.chr16.nic	protein_coding	1351928,1352102,1352239,1361872,1362038,1362206,1362452,1362611,1362825,1362997	1352017,1352159,1352306,1361955,1362131,1362320,1362534,1362742,1362906,1363350	Gene ID= ENSG00000090581.9 TPM= 4.83 Transcript Type= NA
chr16	1351951	1352499	1351951	1352499	+	ENST00000527137.2@GNPTG	ENST00000527137.2	protein_coding	1351951,1352102,1352239	1352017,1352159,1352499	Gene ID= ENSG00000090581.9 TPM= 2.9 Transcript Type= protein_coding
chr16	1363206	1379683	1363206	1379683	-	transcript374.chr16.nic@UNKL	transcript374.chr16.nic	protein_coding	1379594,1371519,1370130,1367656,1367092,1366018,1363206	1379683,1371611,1370357,1367858,1367349,1366395,1364255	Gene ID= ENSG00000059145.18 TPM= 4.83 Transcript Type= NA
chr16	1365012	1379709	1365012	1379709	-	transcript381.chr16.nic@UNKL	transcript381.chr16.nic	protein_coding	1379533,1371519,1370130,1367656,1367092,1365012	1379709,1371611,1370357,1367858,1367349,1366395	Gene ID= ENSG00000059145.18 TPM= 2.9 Transcript Type= NA
chr16	1365684	1379683	1365684	1379683	-	transcript391.chr16.nic@UNKL	transcript391.chr16.nic	protein_coding	1379594,1371519,1370130,1367656,1367092,1365684	1379683,1371611,1370357,1367858,1367349,1366395	Gene ID= ENSG00000059145.18 TPM= 3.86 Transcript Type= NA
chr16	1365169	1379709	1365169	1379709	-	transcript399.chr16.nnic@UNKL	transcript399.chr16.nnic	protein_coding	1379533,1371519,1367656,1367092,1365169	1379709,1371611,1367858,1367349,1366395	Gene ID= ENSG00000059145.18 TPM= 1.93 Transcript Type= NA
chr16	1364995	1368635	1364995	1368635	-	transcript403.chr16.nic@UNKL	transcript403.chr16.nic	protein_coding	1367656,1364995	1368635,1367349	Gene ID= ENSG00000059145.18 TPM= 5.79 Transcript Type= NA
chr16	1419752	1420756	1419752	1420756	-	ENST00000563974.1@C16orf91	ENST00000563974.1	protein_coding	1419752	1420756	Gene ID= ENSG00000174109.4 TPM= 24.62 Transcript Type= retained_intron
chr16	1419744	1420800	1419744	1420800	-	ENST00000442039.2@C16orf91	ENST00000442039.2	protein_coding	1420692,1419744	1420800,1420612	Gene ID= ENSG00000174109.4 TPM= 30.41 Transcript Type= protein_coding
chr16	1421170	1421465	1421170	1421465	-	transcript405.chr16.nnic@NA	transcript405.chr16.nnic	NA	1421170	1421465	Gene ID= novel_gene_chr16_406 TPM= 3.86 Transcript Type= NA
chr16	1444935	1475580	1444935	1475580	-	ENST00000382745.8@CLCN7	ENST00000382745.8	protein_coding	1474834,1465267,1461603,1461405,1460816,1460418,1459107,1457694,1457254,1456113,1455731,1455134,1454411,1453834,1452755,1451623,1450497,1449276,1448966,1448681,1448355,1447655,1447392,1447006,1444935	1475580,1465338,1461674,1461470,1460948,1460527,1459187,1457756,1457337,1456206,1455795,1455250,1454465,1453894,1452893,1451716,1450666,1449327,1449093,1448766,1448484,1447714,1447568,1447086,1446717	Gene ID= ENSG00000103249.17 TPM= 58.4 Transcript Type= protein_coding
chr16	1444936	1475084	1444936	1475084	-	ENST00000448525.5@CLCN7	ENST00000448525.5	protein_coding	1474834,1461603,1461405,1460816,1460418,1459107,1457694,1457254,1456113,1455731,1455134,1454411,1453834,1452755,1451623,1450497,1449276,1448966,1448681,1448355,1447655,1447392,1447006,1444936	1475084,1461674,1461470,1460948,1460527,1459187,1457756,1457337,1456206,1455795,1455250,1454465,1453894,1452893,1451716,1450666,1449327,1449093,1448766,1448484,1447714,1447568,1447086,1446717	Gene ID= ENSG00000103249.17 TPM= 8.21 Transcript Type= protein_coding
chr16	1493568	1510457	1493568	1510457	+	transcript418.chr16.nic@TELO2	transcript418.chr16.nic	protein_coding	1493568,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506484,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 3.38 Transcript Type= NA
chr16	1493376	1510457	1493376	1510457	+	transcript422.chr16.nic@TELO2	transcript422.chr16.nic	protein_coding	1493376,1494281,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 7.24 Transcript Type= NA
chr16	1493350	1510457	1493350	1510457	+	transcript424.chr16.nic@TELO2	transcript424.chr16.nic	protein_coding	1493350,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502931,1505410,1506238,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 6.27 Transcript Type= NA
chr16	1493350	1510457	1493350	1510457	+	transcript426.chr16.nnic@TELO2	transcript426.chr16.nnic	protein_coding	1493350,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 3.38 Transcript Type= NA
chr16	1493363	1510457	1493363	1510457	+	ENST00000262319.10@TELO2	ENST00000262319.10	protein_coding	1493363,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 99.91 Transcript Type= protein_coding
chr16	1533573	1555580	1533573	1555580	+	ENST00000566264.1@TMEM204	ENST00000566264.1	protein_coding	1533573,1541921,1554782	1534555,1542076,1555580	Gene ID= ENSG00000131634.13 TPM= 32.82 Transcript Type= protein_coding
chr16	1537931	1540288	1537931	1540288	+	transcript437.chr16.nnic@NA	transcript437.chr16.nnic	NA	1537931	1540288	Gene ID= novel_gene_chr16_438 TPM= 1.93 Transcript Type= NA
chr16	1678256	1702086	1678256	1702086	+	ENST00000248098.7@JPT2	ENST00000248098.7	protein_coding	1678256,1685439,1691843,1697812,1698811	1678356,1685587,1691985,1697860,1702086	Gene ID= ENSG00000206053.12 TPM= 1.93 Transcript Type= protein_coding
chr16	1770286	1771730	1770286	1771730	-	ENST00000219302.7@NME3	ENST00000219302.7	protein_coding	1771489,1771280,1771070,1770881,1770286	1771730,1771410,1771171,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 8.93 Transcript Type= protein_coding
chr16	1770320	1771574	1770320	1771574	-	transcript445.chr16.nic@NME3	transcript445.chr16.nic	protein_coding	1771269,1771070,1770881,1770320	1771574,1771171,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 2.17 Transcript Type= NA
chr16	1770344	1771561	1770344	1771561	-	ENST00000563498.1@NME3	ENST00000563498.1	protein_coding	1771280,1771070,1770881,1770344	1771561,1771171,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 5.07 Transcript Type= protein_coding
chr16	1770377	1771557	1770377	1771557	-	ENST00000566600.1@NME3	ENST00000566600.1	protein_coding	1771489,1771070,1770881,1770377	1771557,1771410,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 1.93 Transcript Type= retained_intron
chr16	1770342	1771510	1770342	1771510	-	ENST00000568561.5@NME3	ENST00000568561.5	protein_coding	1771489,1771280,1771070,1770881,1770342	1771510,1771410,1771191,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 3.14 Transcript Type= nonsense_mediated_decay
chr16	1771892	1773148	1771892	1773148	-	transcript468.chr16.nic@MRPS34	transcript468.chr16.nic	protein_coding	1772799,1771892	1773148,1772646	Gene ID= ENSG00000074071.14 TPM= 9.33 Transcript Type= NA
chr16	1771890	1773155	1771890	1773155	-	ENST00000397375.6@MRPS34	ENST00000397375.6	protein_coding	1772799,1772604,1771890	1773155,1772646,1772513	Gene ID= ENSG00000074071.14 TPM= 107.8 Transcript Type= protein_coding
chr16	1771890	1773150	1771890	1773150	-	ENST00000177742.7@MRPS34	ENST00000177742.7	protein_coding	1772799,1772604,1771890	1773150,1772646,1772534	Gene ID= ENSG00000074071.14 TPM= 4.51 Transcript Type= protein_coding
chr16	1776712	1782495	1776712	1782495	-	transcript452.chr16.nic@SPSB3	transcript452.chr16.nic	protein_coding	1781766,1781358,1778435,1778134,1777946,1777747,1776712	1782495,1781495,1778612,1778321,1778048,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 35.32 Transcript Type= NA
chr16	1776712	1782820	1776712	1782820	-	ENST00000566339.5@SPSB3	ENST00000566339.5	protein_coding	1782502,1781358,1778435,1778134,1777946,1777747,1776712	1782820,1781495,1778612,1778321,1778048,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 186.87 Transcript Type= protein_coding
chr16	1776722	1782594	1776722	1782594	-	ENST00000563741.5@SPSB3	ENST00000563741.5	protein_coding	1782502,1781358,1777946,1777747,1776722	1782594,1781495,1778612,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 11.22 Transcript Type= retained_intron
chr16	1776718	1782557	1776718	1782557	-	ENST00000567868.5@SPSB3	ENST00000567868.5	protein_coding	1782502,1781358,1778134,1777946,1777747,1776718	1782557,1781495,1778612,1778048,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 30.47 Transcript Type= retained_intron
chr16	1776718	1782552	1776718	1782552	-	ENST00000569380.5@SPSB3	ENST00000569380.5	protein_coding	1782502,1781358,1777747,1776718	1782552,1781495,1778612,1777443	Gene ID= ENSG00000162032.15 TPM= 4 Transcript Type= retained_intron
chr16	1782932	1789181	1782932	1789181	+	ENST00000568834.5@NUBP2	ENST00000568834.5	protein_coding	1782932,1786537,1787677,1787941,1788138,1788569	1783036,1786655,1787831,1788051,1788207,1789181	Gene ID= ENSG00000095906.16 TPM= 77.22 Transcript Type= nonsense_mediated_decay
chr16	1782901	1789191	1782901	1789191	+	ENST00000262302.13@NUBP2	ENST00000262302.13	protein_coding	1782901,1786537,1786757,1787677,1787941,1788138,1788569	1783036,1786655,1786955,1787831,1788051,1788207,1789191	Gene ID= ENSG00000095906.16 TPM= 49.55 Transcript Type= protein_coding
chr16	1807633	1827194	1807633	1827194	-	ENST00000397356.7@HAGH	ENST00000397356.7	protein_coding	1826712,1822865,1822300,1819897,1819115,1817168,1816893,1809754,1807633	1827194,1823037,1822364,1820014,1819223,1817271,1816994,1809833,1809382	Gene ID= ENSG00000063854.12 TPM= 107.63 Transcript Type= protein_coding
chr16	1809124	1826841	1809124	1826841	-	transcript480.chr16.nic@HAGH	transcript480.chr16.nic	protein_coding	1826712,1822865,1822300,1819897,1819115,1817168,1816893,1809754,1809124	1826841,1823037,1822364,1820014,1819223,1817271,1816994,1809833,1809446	Gene ID= ENSG00000063854.12 TPM= 8.52 Transcript Type= NA
chr16	1809103	1826841	1809103	1826841	-	ENST00000397353.6@HAGH	ENST00000397353.6	protein_coding	1826712,1826507,1822865,1822300,1819897,1819115,1817168,1816893,1809754,1809103	1826841,1826602,1823037,1822364,1820014,1819223,1817271,1816994,1809833,1809382	Gene ID= ENSG00000063854.12 TPM= 145.12 Transcript Type= protein_coding
chr16	1826941	1828914	1826941	1828914	+	ENST00000427358.3@FAHD1	ENST00000427358.3	protein_coding	1826941	1828914	Gene ID= ENSG00000180185.11 TPM= 26.06 Transcript Type= protein_coding
chr16	1938210	1943326	1938210	1943326	-	ENST00000361871.7@MSRB1	ENST00000361871.7	protein_coding	1943102,1941257,1940778,1938210	1943326,1941405,1940892,1939143	Gene ID= ENSG00000198736.11 TPM= 125.49 Transcript Type= protein_coding
chr16	1943974	1954726	1943974	1954726	-	ENST00000268661.7@RPL3L	ENST00000268661.7	protein_coding	1954629,1953956,1952874,1950844,1947194,1946938,1946625,1945835,1945499,1943974	1954726,1954148,1953042,1950979,1947380,1947098,1946726,1945930,1945618,1944893	Gene ID= ENSG00000140986.7 TPM= 265.25 Transcript Type= protein_coding
chr16	1959508	1961975	1959508	1961975	+	ENST00000268668.10@NDUFB10	ENST00000268668.10	protein_coding	1959508,1961153,1961497,1961797	1959754,1961291,1961636,1961975	Gene ID= ENSG00000140990.14 TPM= 300.21 Transcript Type= protein_coding
chr16	1962052	1964860	1962052	1964860	-	ENST00000343262.8@RPS2	ENST00000343262.8	protein_coding	1964807,1964449,1964276,1963149,1962736,1962497,1962052	1964860,1964628,1964365,1963256,1962909,1962656,1962270	Gene ID= ENSG00000140988.15 TPM= 3755.3 Transcript Type= protein_coding
chr16	1962061	1964631	1962061	1964631	-	ENST00000527871.5@RPS2	ENST00000527871.5	protein_coding	1964449,1964276,1962497,1962061	1964631,1964365,1963256,1962270	Gene ID= ENSG00000140988.15 TPM= 8.93 Transcript Type= retained_intron
chr16	1964959	1965509	1964959	1965509	+	ENST00000531523.1@SNHG9	ENST00000531523.1	lincRNA	1964959,1965406	1965129,1965509	Gene ID= ENSG00000255198.4 TPM= 36.68 Transcript Type= lincRNA
chr16	1972054	1978684	1972054	1978684	+	transcript553.chr16.nnic@TBL3	transcript553.chr16.nnic	protein_coding	1972054,1974056,1974197,1974376,1974538,1974763,1974928,1975187,1975345,1975529,1975808,1976056,1976211,1976814,1977054,1977356,1977514,1977742,1977958,1978149,1978313,1978552	1972205,1974107,1974292,1974423,1974679,1974847,1975098,1975262,1975438,1975710,1975949,1976114,1976314,1976961,1977284,1977426,1977592,1977800,1978061,1978220,1978471,1978684	Gene ID= ENSG00000183751.14 TPM= 5.31 Transcript Type= NA
chr16	1972086	1978684	1972086	1978684	+	ENST00000569628.5@TBL3	ENST00000569628.5	protein_coding	1972086,1974056,1974376,1974538,1974763,1974928,1975187,1975345,1975529,1975808,1976056,1976211,1976814,1977054,1977356,1977514,1977742,1977958,1978149,1978313,1978552	1972205,1974292,1974423,1974679,1974847,1975098,1975262,1975438,1975710,1975949,1976114,1976314,1976961,1977284,1977426,1977670,1977800,1978061,1978220,1978471,1978684	Gene ID= ENSG00000183751.14 TPM= 69.99 Transcript Type= retained_intron
chr16	1984213	1987749	1984213	1987749	+	ENST00000248114.6@GFER	ENST00000248114.6	protein_coding	1984213,1984747,1985866	1984476,1984943,1987749	Gene ID= ENSG00000127554.12 TPM= 4.83 Transcript Type= protein_coding
chr16	1997654	2009840	1997654	2009840	-	transcript580.chr16.nic@ZNF598	transcript580.chr16.nic	protein_coding	2009524,2003616,2002991,2002521,2002206,2001583,2001004,2000409,1999496,1998965,1998702,1997654	2009840,2003728,2003120,2002732,2002423,2001700,2001191,2000481,2000256,1999121,1998852,1998585	Gene ID= ENSG00000167962.13 TPM= 26.38 Transcript Type= NA
chr16	1997655	2009840	1997655	2009840	-	transcript585.chr16.nic@ZNF598	transcript585.chr16.nic	protein_coding	2009524,2003616,2002991,2002521,2002206,2001583,2001004,2000391,1999496,1998965,1997655	2009840,2003728,2003120,2002732,2002423,2001700,2001191,2000481,2000256,1999121,1998852	Gene ID= ENSG00000167962.13 TPM= 7.56 Transcript Type= NA
chr16	1997654	2009764	1997654	2009764	-	ENST00000562988.5@ZNF598	ENST00000562988.5	protein_coding	2009524,2003616,2002991,2002206,2001592,2001004,2000409,1999496,1998965,1998702,1997654	2009764,2003728,2003120,2002732,2001700,2001191,2000481,2000256,1999121,1998852,1998585	Gene ID= ENSG00000167962.13 TPM= 14.96 Transcript Type= retained_intron
chr16	2026868	2039026	2026868	2039026	+	ENST00000424542.6@SLC9A3R2	ENST00000424542.6	protein_coding	2026868,2029582,2036324,2036728,2036955,2037538,2037826	2027218,2029782,2036503,2036881,2036998,2037600,2039026	Gene ID= ENSG00000065054.13 TPM= 46.82 Transcript Type= protein_coding
chr16	2033253	2038489	2033253	2038489	+	transcript592.chr16.nic@SLC9A3R2	transcript592.chr16.nic	protein_coding	2033253,2036324,2036728,2036955,2037538,2037859	2033432,2036503,2036881,2036998,2037600,2038489	Gene ID= ENSG00000065054.13 TPM= 6.27 Transcript Type= NA
chr16	2026928	2038489	2026928	2038489	+	ENST00000432365.6@SLC9A3R2	ENST00000432365.6	protein_coding	2026928,2029582,2036324,2036728,2036955,2037538,2037859	2027218,2029782,2036503,2036881,2036998,2037600,2038489	Gene ID= ENSG00000065054.13 TPM= 17.86 Transcript Type= protein_coding
chr16	2030619	2036537	2030619	2036537	-	transcript595.chr16.nnic@NA	transcript595.chr16.nnic	NA	2034420,2031978,2030619	2036537,2034346,2030654	Gene ID= novel_gene_chr16_596 TPM= 2.9 Transcript Type= NA
chr16	2039815	2047866	2039815	2047866	-	ENST00000219066.5@NTHL1	ENST00000219066.5	protein_coding	2047709,2046128,2044630,2043567,2040133,2039815	2047866,2046366,2044800,2043726,2040238,2040047	Gene ID= ENSG00000065057.7 TPM= 8.69 Transcript Type= protein_coding
chr16	2047976	2088703	2047976	2088703	+	transcript600.chr16.nnic@TSC2	transcript600.chr16.nnic	protein_coding	2047976,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2063041,2064272,2065519,2070456,2071510,2071784,2072241,2072849,2074200,2075799,2076068,2076491,2079032,2079276,2079557,2080165,2081595,2082436,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446	2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2064427,2065635,2070578,2071616,2071934,2072363,2072983,2074389,2075892,2076170,2076585,2079196,2079428,2079669,2080377,2081798,2082504,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088703	Gene ID= ENSG00000103197.16 TPM= 17.38 Transcript Type= NA
chr16	2078779	2088703	2078779	2088703	+	transcript606.chr16.nic@TSC2	transcript606.chr16.nic	protein_coding	2078779,2079276,2079557,2080165,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446	2079196,2079428,2079669,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088703	Gene ID= ENSG00000103197.16 TPM= 11.58 Transcript Type= NA
chr16	2047989	2088702	2047989	2088702	+	ENST00000401874.6@TSC2	ENST00000401874.6	protein_coding	2047989,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2062972,2064272,2065519,2070456,2071510,2071784,2072241,2072849,2074200,2075799,2076068,2076491,2079035,2079276,2079557,2080165,2081595,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446	2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2064427,2065635,2070578,2071616,2071934,2072363,2072983,2074389,2075892,2076170,2076585,2079196,2079428,2079669,2080377,2081798,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088702	Gene ID= ENSG00000103197.16 TPM= 24.13 Transcript Type= protein_coding
chr16	2152146	2154640	2152146	2154640	+	transcript612.chr16.nnic@NA	transcript612.chr16.nnic	NA	2152146	2154640	Gene ID= novel_gene_chr16_613 TPM= 10.62 Transcript Type= NA
chr16	2154797	2155358	2154797	2155358	-	ENST00000563192.1@SNHG19	ENST00000563192.1	lincRNA	2155143,2154797	2155358,2154922	Gene ID= ENSG00000260260.1 TPM= 22.2 Transcript Type= lincRNA
chr16	2155748	2176936	2155748	2176936	+	transcript623.chr16.nic@TRAF7	transcript623.chr16.nic	protein_coding	2155748,2163883,2165879,2168077,2170614,2171264,2171572,2172191,2172465,2173182,2173481,2173788,2173921,2174251,2175111,2175301,2175834,2176049,2176265,2176560	2155858,2164001,2165936,2168168,2170730,2171356,2171605,2172374,2172599,2173399,2173554,2173836,2174048,2174333,2175150,2175622,2175953,2176180,2176384,2176936	Gene ID= ENSG00000131653.12 TPM= 1.93 Transcript Type= NA
chr16	2155765	2178129	2155765	2178129	+	ENST00000326181.10@TRAF7	ENST00000326181.10	protein_coding	2155765,2163883,2165879,2168077,2170614,2171264,2171572,2172191,2172465,2173182,2173481,2173788,2173921,2174251,2175111,2175301,2175500,2175834,2176049,2176265,2176560	2155858,2164001,2165936,2168168,2170730,2171356,2171605,2172374,2172599,2173399,2173554,2173836,2174048,2174333,2175150,2175417,2175622,2175953,2176180,2176384,2178129	Gene ID= ENSG00000131653.12 TPM= 15.44 Transcript Type= protein_coding
chr16	2205214	2209412	2205214	2209412	+	ENST00000569417.5@MLST8	ENST00000569417.5	protein_coding	2205214,2206031,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2205512,2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209412	Gene ID= ENSG00000167965.17 TPM= 65.66 Transcript Type= protein_coding
chr16	2205177	2209396	2205177	2209396	+	ENST00000564088.5@MLST8	ENST00000564088.5	protein_coding	2205177,2206061,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2205512,2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209396	Gene ID= ENSG00000167965.17 TPM= 16.76 Transcript Type= protein_coding
chr16	2205454	2209397	2205454	2209397	+	transcript647.chr16.nic@MLST8	transcript647.chr16.nic	protein_coding	2205454,2206031,2206358,2206497,2207035,2207193,2208450,2208759	2205512,2206214,2206409,2206659,2207110,2207345,2208613,2209397	Gene ID= ENSG00000167965.17 TPM= 22.43 Transcript Type= NA
chr16	2205471	2209397	2205471	2209397	+	ENST00000568194.5@MLST8	ENST00000568194.5	protein_coding	2205471,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209397	Gene ID= ENSG00000167965.17 TPM= 8.71 Transcript Type= retained_intron
chr16	2205741	2209397	2205741	2209397	+	ENST00000397124.5@MLST8	ENST00000397124.5	protein_coding	2205741,2206031,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2205875,2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209397	Gene ID= ENSG00000167965.17 TPM= 8.71 Transcript Type= protein_coding
chr16	2205731	2209416	2205731	2209416	+	ENST00000566835.5@MLST8	ENST00000566835.5	protein_coding	2205731,2206061,2206358,2206497,2207035,2207193,2208450,2208759	2205875,2206214,2206409,2206659,2207110,2207345,2208613,2209416	Gene ID= ENSG00000167965.17 TPM= 10.2 Transcript Type= nonsense_mediated_decay
chr16	2205769	2209352	2205769	2209352	+	ENST00000565250.1@MLST8	ENST00000565250.1	protein_coding	2205769,2206061,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2205875,2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209352	Gene ID= ENSG00000167965.17 TPM= 1.93 Transcript Type= protein_coding
chr16	2211997	2214807	2211997	2214807	-	ENST00000333503.7@PGP	ENST00000333503.7	protein_coding	2214138,2211997	2214807,2214053	Gene ID= ENSG00000184207.8 TPM= 25.1 Transcript Type= protein_coding
chr16	2223597	2235742	2223597	2235742	+	transcript672.chr16.nic@E4F1	transcript672.chr16.nic	protein_coding	2223597,2228292,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216	2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 4.73 Transcript Type= NA
chr16	2223611	2235742	2223611	2235742	+	transcript673.chr16.nic@E4F1	transcript673.chr16.nic	protein_coding	2223611,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216	2223929,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 4.73 Transcript Type= NA
chr16	2223580	2235738	2223580	2235738	+	transcript676.chr16.nic@E4F1	transcript676.chr16.nic	protein_coding	2223580,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081	2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235738	Gene ID= ENSG00000167967.15 TPM= 2.9 Transcript Type= NA
chr16	2223609	2235742	2223609	2235742	+	transcript678.chr16.nic@E4F1	transcript678.chr16.nic	protein_coding	2223609,2228372,2229570,2232171,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216	2223770,2228523,2229675,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 2.8 Transcript Type= NA
chr16	2223623	2235742	2223623	2235742	+	transcript679.chr16.nnic@E4F1	transcript679.chr16.nnic	protein_coding	2223623,2228372,2229570,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216	2223770,2228523,2229675,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 2.8 Transcript Type= NA
chr16	2223566	2235742	2223566	2235742	+	ENST00000301727.8@E4F1	ENST00000301727.8	protein_coding	2223566,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216	2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 70.85 Transcript Type= protein_coding
chr16	2239895	2251572	2239895	2251572	-	ENST00000562238.5@ECI1	ENST00000562238.5	protein_coding	2251515,2251316,2246859,2244406,2243369,2243046,2239895	2251572,2251429,2246986,2244552,2243439,2243224,2240145	Gene ID= ENSG00000167969.12 TPM= 7.72 Transcript Type= protein_coding
chr16	2253116	2268114	2253116	2268114	-	transcript687.chr16.nic@RNPS1	transcript687.chr16.nic	protein_coding	2266110,2264573,2264176,2263096,2262740,2262278,2255585,2253116	2268114,2264760,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 9.72 Transcript Type= NA
chr16	2253116	2267848	2253116	2267848	-	ENST00000397086.6@RNPS1	ENST00000397086.6	protein_coding	2267663,2264573,2264176,2263096,2262740,2262278,2255585,2253116	2267848,2264760,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 16.24 Transcript Type= protein_coding
chr16	2253116	2268412	2253116	2268412	-	ENST00000320225.9@RNPS1	ENST00000320225.9	protein_coding	2268055,2264573,2264176,2263096,2262740,2262278,2255585,2253116	2268412,2264760,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 101.18 Transcript Type= protein_coding
chr16	2253117	2268397	2253117	2268397	-	ENST00000566458.5@RNPS1	ENST00000566458.5	protein_coding	2268055,2264176,2263096,2262740,2262278,2255585,2253117	2268397,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 48.67 Transcript Type= protein_coding
chr16	2323339	2340767	2323339	2340767	-	transcript722.chr16.nic@ABCA3	transcript722.chr16.nic	protein_coding	2340573,2329648,2328453,2326413,2326010,2324404,2323339	2340767,2329854,2328757,2326492,2326274,2324531,2323688	Gene ID= ENSG00000167972.13 TPM= 2.9 Transcript Type= NA
chr16	2275881	2340735	2275881	2340735	-	ENST00000301732.9@ABCA3	ENST00000301732.9	protein_coding	2340573,2329648,2328453,2326413,2326010,2324404,2323523,2319581,2317648,2317283,2308450,2303969,2300005,2299403,2298386,2297766,2297329,2295590,2292140,2289434,2288026,2286694,2285442,2284779,2284279,2283186,2281381,2281027,2278943,2278288,2277879,2277597,2275881	2340735,2329854,2328757,2326492,2326274,2324531,2323688,2319840,2317764,2317403,2308623,2304150,2300148,2299532,2298540,2297921,2297539,2295740,2292238,2289620,2288329,2286967,2285646,2284998,2284437,2283358,2281509,2281221,2279130,2278458,2278069,2277670,2276805	Gene ID= ENSG00000167972.13 TPM= 32.82 Transcript Type= protein_coding
chr16	2520337	2529698	2520337	2529698	+	transcript730.chr16.nic@AMDHD2	transcript730.chr16.nic	protein_coding	2520337,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528994,2529475	2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528559,2529095,2529698	Gene ID= ENSG00000162066.14 TPM= 1.93 Transcript Type= NA
chr16	2520365	2531422	2520365	2531422	+	ENST00000302956.8@AMDHD2	ENST00000302956.8	protein_coding	2520365,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528994,2529475	2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528718,2529095,2531422	Gene ID= ENSG00000162066.14 TPM= 3.86 Transcript Type= protein_coding
chr16	2520365	2529698	2520365	2529698	+	ENST00000293971.10@AMDHD2	ENST00000293971.10	protein_coding	2520365,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528650,2528994,2529475	2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528559,2528718,2529095,2529698	Gene ID= ENSG00000162066.14 TPM= 3.86 Transcript Type= protein_coding
chr16	2597804	2600051	2597804	2600051	-	transcript756.chr16.nnic@NA	transcript756.chr16.nnic	NA	2597804	2600051	Gene ID= novel_gene_chr16_757 TPM= 5.79 Transcript Type= NA
chr16	2599403	2629211	2599403	2629211	+	transcript746.chr16.nnic@AC141586.1	transcript746.chr16.nnic	transcribed_unprocessed_pseudogene	2599403,2610462,2613960,2628825	2599530,2611052,2614068,2629211	Gene ID= ENSG00000215154.6 TPM= 1.93 Transcript Type= NA
chr16	2603350	2630494	2603350	2630494	+	ENST00000399702.5@AC141586.1	ENST00000399702.5	transcribed_unprocessed_pseudogene	2603350,2610462,2613960,2628825	2603727,2611052,2614068,2630494	Gene ID= ENSG00000215154.6 TPM= 1.93 Transcript Type= processed_transcript
chr16	2600336	2603009	2600336	2603009	+	transcript754.chr16.nnic@NA	transcript754.chr16.nnic	NA	2600336	2603009	Gene ID= novel_gene_chr16_755 TPM= 2.9 Transcript Type= NA
chr16	2669612	2673435	2669612	2673435	-	transcript760.chr16.nnic@ERVK13-1	transcript760.chr16.nnic	processed_transcript	2673283,2672707,2669612	2673435,2672859,2672570	Gene ID= ENSG00000260565.6 TPM= 3.86 Transcript Type= NA
chr16	2661149	2673441	2661149	2673441	-	ENST00000568395.1@ERVK13-1	ENST00000568395.1	processed_transcript	2673283,2669411,2661149	2673441,2672570,2663407	Gene ID= ENSG00000260565.6 TPM= 1.93 Transcript Type= lincRNA
chr16	2682475	2709030	2682475	2709030	+	ENST00000301738.8@KCTD5	ENST00000301738.8	protein_coding	2682475,2695935,2697906,2699821,2702353,2707298	2682800,2696043,2697997,2699916,2702478,2709030	Gene ID= ENSG00000167977.8 TPM= 45.37 Transcript Type= protein_coding
chr16	2752329	2771412	2752329	2771412	+	ENST00000301740.12@SRRM2	ENST00000301740.12	protein_coding	2752329,2756334,2757472,2757781,2758470,2758985,2759140,2759352,2759569,2760301,2761561,2768997,2770352,2770604,2770858	2752846,2756606,2757579,2757945,2758547,2759047,2759172,2759402,2759661,2760499,2768261,2769284,2770465,2770717,2771412	Gene ID= ENSG00000167978.16 TPM= 220.09 Transcript Type= protein_coding
chr16	2752638	2761707	2752638	2761707	+	ENST00000575009.5@SRRM2	ENST00000575009.5	protein_coding	2752638,2757472,2757781,2758470,2758985,2759140,2759352,2759569,2760301,2761561	2752846,2757579,2757945,2758547,2759047,2759172,2759402,2759661,2760499,2761707	Gene ID= ENSG00000167978.16 TPM= 9.65 Transcript Type= protein_coding
chr16	2752714	2758524	2752714	2758524	+	ENST00000576415.5@SRRM2	ENST00000576415.5	protein_coding	2752714,2757472,2757781,2758470	2752846,2757579,2757945,2758524	Gene ID= ENSG00000167978.16 TPM= 12.55 Transcript Type= protein_coding
chr16	2771414	2777297	2771414	2777297	-	ENST00000409906.8@ELOB	ENST00000409906.8	protein_coding	2777237,2776993,2775451,2771414	2777297,2777127,2775556,2772102	Gene ID= ENSG00000103363.14 TPM= 5.15 Transcript Type= protein_coding
chr16	2771943	2777272	2771943	2777272	-	ENST00000572954.1@ELOB	ENST00000572954.1	protein_coding	2777237,2776993,2771943	2777272,2777127,2772102	Gene ID= ENSG00000103363.14 TPM= 14.48 Transcript Type= protein_coding
chr16	2771941	2777127	2771941	2777127	-	ENST00000494946.6@ELOB	ENST00000494946.6	protein_coding	2776993,2775451,2771941	2777127,2775625,2772102	Gene ID= ENSG00000103363.14 TPM= 8.04 Transcript Type= protein_coding
chr16	2777319	2780568	2777319	2780568	+	ENST00000621230.1@AC092117.1	ENST00000621230.1	lincRNA	2777319	2780568	Gene ID= ENSG00000276791.1 TPM= 9.65 Transcript Type= lincRNA
chr16	2883264	2899382	2883264	2899382	+	transcript788.chr16.nic@FLYWCH2	transcript788.chr16.nic	protein_coding	2883264,2896352,2899049	2883366,2896771,2899382	Gene ID= ENSG00000162076.12 TPM= 2.41 Transcript Type= NA
chr16	2883186	2899382	2883186	2899382	+	ENST00000396958.7@FLYWCH2	ENST00000396958.7	protein_coding	2883186,2895220,2896352,2899049	2883366,2895320,2896771,2899382	Gene ID= ENSG00000162076.12 TPM= 18.82 Transcript Type= protein_coding
chr16	2911920	2949809	2911920	2949809	+	transcript792.chr16.nic@FLYWCH1	transcript792.chr16.nic	protein_coding	2911920,2914176,2929613,2930410,2933130,2933716,2934615,2936332,2937121,2938184,2940032,2948688	2912154,2914289,2930010,2930880,2933582,2933979,2934667,2936425,2937384,2938456,2940092,2949809	Gene ID= ENSG00000059122.16 TPM= 11.12 Transcript Type= NA
chr16	2911867	2949809	2911867	2949809	+	transcript793.chr16.nnic@FLYWCH1	transcript793.chr16.nnic	protein_coding	2911867,2914176,2929613,2930410,2933130,2933716,2934615,2936640,2937121,2938184,2940032,2948688	2912154,2914289,2930010,2930880,2933582,2933979,2934667,2936877,2937384,2938456,2940092,2949809	Gene ID= ENSG00000059122.16 TPM= 4.37 Transcript Type= NA
chr16	2911867	2949809	2911867	2949809	+	transcript795.chr16.nnic@FLYWCH1	transcript795.chr16.nnic	protein_coding	2911867,2914176,2929613,2930410,2933130,2933716,2934745,2936332,2937121,2938184,2940032,2948688	2912154,2914289,2930010,2930880,2933582,2933979,2934800,2936425,2937384,2938456,2940092,2949809	Gene ID= ENSG00000059122.16 TPM= 11.13 Transcript Type= NA
chr16	2911983	2949809	2911983	2949809	+	transcript797.chr16.nic@FLYWCH1	transcript797.chr16.nic	protein_coding	2911983,2914176,2928824,2929613,2930410,2933130,2933716,2937121,2938184,2940032,2948688	2912154,2914289,2928917,2930010,2930880,2933582,2933979,2937384,2938456,2940092,2949809	Gene ID= ENSG00000059122.16 TPM= 17.49 Transcript Type= NA
chr16	2911923	2949809	2911923	2949809	+	transcript798.chr16.nic@FLYWCH1	transcript798.chr16.nic	protein_coding	2911923,2914176,2929613,2930410,2933130,2933716,2934615,2937121,2938184,2940032,2948688	2912154,2914289,2930010,2930880,2933582,2933979,2934667,2937384,2938456,2940092,2949809	Gene ID= ENSG00000059122.16 TPM= 5.34 Transcript Type= NA
chr16	2934881	2949813	2934881	2949813	+	ENST00000570752.5@FLYWCH1	ENST00000570752.5	protein_coding	2934881,2937121,2938184,2940032,2948688	2936877,2937384,2938456,2940092,2949813	Gene ID= ENSG00000059122.16 TPM= 32.94 Transcript Type= processed_transcript
chr16	2936525	2949811	2936525	2949811	+	ENST00000574985.1@FLYWCH1	ENST00000574985.1	protein_coding	2936525,2938184,2940032,2948688	2937384,2938456,2940092,2949811	Gene ID= ENSG00000059122.16 TPM= 15.56 Transcript Type= retained_intron
chr16	2969247	2973480	2969247	2973480	+	transcript811.chr16.nnic@PAQR4	transcript811.chr16.nnic	protein_coding	2969247,2971157,2971515,2971886	2969840,2971378,2971684,2973480	Gene ID= ENSG00000162073.13 TPM= 13.2 Transcript Type= NA
chr16	2969245	2973489	2969245	2973489	+	ENST00000318782.8@PAQR4	ENST00000318782.8	protein_coding	2969245,2971157,2971515	2969840,2971378,2973489	Gene ID= ENSG00000162073.13 TPM= 17.54 Transcript Type= protein_coding
chr16	2969270	2973482	2969270	2973482	+	ENST00000293978.12@PAQR4	ENST00000293978.12	protein_coding	2969270,2971274,2971515	2969840,2971378,2973482	Gene ID= ENSG00000162073.13 TPM= 5.96 Transcript Type= protein_coding
chr16	2999611	3004824	2999611	3004824	-	transcript820.chr16.nnic@AC004233.1	transcript820.chr16.nnic	sense_overlapping	3003122,2999611	3004824,2999787	Gene ID= ENSG00000262362.1 TPM= 1.93 Transcript Type= NA
chr16	3004181	3006399	3004181	3006399	+	transcript817.chr16.nnic@AC004233.3	transcript817.chr16.nnic	lincRNA	3004181,3006220	3004879,3006399	Gene ID= ENSG00000272079.2 TPM= 1.93 Transcript Type= NA
chr16	3004181	3007382	3004181	3007382	+	transcript819.chr16.nnic@AC004233.3	transcript819.chr16.nnic	lincRNA	3004181,3006220	3004879,3007382	Gene ID= ENSG00000272079.2 TPM= 2.9 Transcript Type= NA
chr16	3020312	3022383	3020312	3022383	+	ENST00000326577.8@TNFRSF12A	ENST00000326577.8	protein_coding	3020312,3021215,3021555,3021771	3020491,3021319,3021689,3022383	Gene ID= ENSG00000006327.13 TPM= 323.86 Transcript Type= protein_coding
chr16	3020359	3022383	3020359	3022383	+	ENST00000341627.5@TNFRSF12A	ENST00000341627.5	protein_coding	3020359,3021555,3021771	3020491,3021689,3022383	Gene ID= ENSG00000006327.13 TPM= 17.86 Transcript Type= protein_coding
chr16	3020390	3022383	3020390	3022383	+	ENST00000571351.1@TNFRSF12A	ENST00000571351.1	protein_coding	3020390,3021555,3021771	3021319,3021689,3022383	Gene ID= ENSG00000006327.13 TPM= 9.65 Transcript Type= retained_intron
chr16	3022620	3024246	3022620	3024246	-	ENST00000248089.7@HCFC1R1	ENST00000248089.7	protein_coding	3023847,3023474,3023233,3022620	3024246,3023530,3023361,3022998	Gene ID= ENSG00000103145.10 TPM= 32.1 Transcript Type= protein_coding
chr16	3022625	3023961	3022625	3023961	-	ENST00000574151.5@HCFC1R1	ENST00000574151.5	protein_coding	3023847,3023233,3022625	3023961,3023361,3022998	Gene ID= ENSG00000103145.10 TPM= 14.48 Transcript Type= protein_coding
chr16	3022663	3024261	3022663	3024261	-	ENST00000575214.1@HCFC1R1	ENST00000575214.1	protein_coding	3023233,3022663	3024261,3022998	Gene ID= ENSG00000103145.10 TPM= 3.14 Transcript Type= retained_intron
chr16	3024009	3027754	3024009	3027754	+	transcript821.chr16.nnic@THOC6	transcript821.chr16.nnic	protein_coding	3024009,3025708,3025924,3026045,3026251,3026365,3026516,3026679,3026867,3027011,3027170,3027366,3027577	3024365,3025823,3025988,3026166,3026288,3026413,3026587,3026781,3026916,3027073,3027280,3027500,3027754	Gene ID= ENSG00000131652.13 TPM= 2.25 Transcript Type= NA
chr16	3024009	3027754	3024009	3027754	+	transcript825.chr16.nnic@THOC6	transcript825.chr16.nnic	protein_coding	3024009,3025708,3025924,3026063,3026251,3026365,3026516,3026679,3026867,3027011,3027366,3027577	3024365,3025823,3025988,3026166,3026288,3026413,3026587,3026781,3026916,3027073,3027500,3027754	Gene ID= ENSG00000131652.13 TPM= 3.14 Transcript Type= NA
chr16	3024009	3027754	3024009	3027754	+	transcript826.chr16.nnic@THOC6	transcript826.chr16.nnic	protein_coding	3024009,3025708,3025924,3026251,3026365,3026516,3026679,3026867,3027011,3027170,3027366,3027577	3024365,3025823,3025988,3026288,3026413,3026587,3026781,3026916,3027073,3027280,3027500,3027754	Gene ID= ENSG00000131652.13 TPM= 5.39 Transcript Type= NA
chr16	3024009	3027748	3024009	3027748	+	transcript827.chr16.nic@THOC6	transcript827.chr16.nic	protein_coding	3024009,3025708,3025924,3026063,3026251,3026365,3026516,3026679,3026867,3027011,3027170	3024365,3025823,3025988,3026166,3026288,3026413,3026587,3026781,3026916,3027073,3027748	Gene ID= ENSG00000131652.13 TPM= 1.93 Transcript Type= NA
chr16	3024009	3027754	3024009	3027754	+	transcript830.chr16.nic@THOC6	transcript830.chr16.nic	protein_coding	3024009,3025708,3025924,3026365,3026516,3026679,3026867,3027011,3027170,3027366,3027577	3024365,3025823,3026288,3026413,3026587,3026781,3026916,3027073,3027280,3027500,3027754	Gene ID= ENSG00000131652.13 TPM= 2.25 Transcript Type= NA
chr16	3024009	3027747	3024009	3027747	+	transcript843.chr16.nic@THOC6	transcript843.chr16.nic	protein_coding	3024009,3025708,3027011	3024365,3026916,3027747	Gene ID= ENSG00000131652.13 TPM= 1.93 Transcript Type= NA
chr16	3065297	3069667	3065297	3069667	+	ENST00000325568.9@IL32	ENST00000325568.9	protein_coding	3065297,3065784,3067377,3067554,3067984,3068180,3068990	3065494,3065826,3067415,3067613,3068010,3068239,3069667	Gene ID= ENSG00000008517.16 TPM= 7.72 Transcript Type= protein_coding
chr16	3065384	3069728	3065384	3069728	+	ENST00000525643.6@IL32	ENST00000525643.6	protein_coding	3065384,3065784,3067377,3067554,3067984,3068180,3068990	3065687,3065826,3067415,3067613,3068010,3068239,3069728	Gene ID= ENSG00000008517.16 TPM= 9.65 Transcript Type= protein_coding
chr16	3065610	3069551	3065610	3069551	+	ENST00000444393.7@IL32	ENST00000444393.7	protein_coding	3065610,3065784,3067377,3067554,3067984,3068180,3068990	3065710,3065826,3067415,3067613,3068010,3068239,3069551	Gene ID= ENSG00000008517.16 TPM= 3.86 Transcript Type= protein_coding
chr16	3065329	3069551	3065329	3069551	+	transcript855.chr16.nic@IL32	transcript855.chr16.nic	protein_coding	3065329,3065781,3067377,3067984,3068180,3068990	3065494,3065826,3067415,3068010,3068239,3069551	Gene ID= ENSG00000008517.16 TPM= 2.9 Transcript Type= NA
chr16	3065369	3069551	3065369	3069551	+	ENST00000440815.7@IL32	ENST00000440815.7	protein_coding	3065369,3065781,3067377,3067554,3067984,3068180,3068990	3065494,3065826,3067415,3067613,3068010,3068239,3069551	Gene ID= ENSG00000008517.16 TPM= 24.13 Transcript Type= protein_coding
chr16	3065662	3069514	3065662	3069514	+	ENST00000548476.5@IL32	ENST00000548476.5	protein_coding	3065662,3067377,3067984,3068180,3068990	3065826,3067613,3068010,3068239,3069514	Gene ID= ENSG00000008517.16 TPM= 1.93 Transcript Type= protein_coding
chr16	3068128	3070600	3068128	3070600	+	transcript864.chr16.nnic@NA	transcript864.chr16.nnic	NA	3068128	3070600	Gene ID= novel_gene_chr16_865 TPM= 3.86 Transcript Type= NA
chr16	3135028	3142805	3135028	3142805	+	ENST00000396878.7@ZNF213	ENST00000396878.7	protein_coding	3135028,3137166,3138418,3138745,3138975,3140689	3135387,3137679,3138541,3138818,3139098,3142805	Gene ID= ENSG00000085644.13 TPM= 16.41 Transcript Type= protein_coding
chr16	3283505	3286884	3283505	3286884	+	transcript899.chr16.nic@ZNF263	transcript899.chr16.nic	protein_coding	3283505,3285059,3285681,3286023	3284205,3285239,3285754,3286884	Gene ID= ENSG00000006194.9 TPM= 1.93 Transcript Type= NA
chr16	3283540	3291460	3283540	3291460	+	transcript902.chr16.nic@ZNF263	transcript902.chr16.nic	protein_coding	3283540,3286023,3288454,3289393	3284205,3286149,3288570,3291460	Gene ID= ENSG00000006194.9 TPM= 1.93 Transcript Type= NA
chr16	3305494	3320006	3305494	3320006	+	transcript886.chr16.nic@ZNF75A	transcript886.chr16.nic	protein_coding	3305494,3308313,3311753,3312677,3313049,3316912,3317190	3305643,3308836,3311948,3312768,3313175,3317022,3320006	Gene ID= ENSG00000162086.14 TPM= 1.93 Transcript Type= NA
chr16	3305494	3320003	3305494	3320003	+	transcript887.chr16.nnic@ZNF75A	transcript887.chr16.nnic	protein_coding	3305494,3308313,3311753,3312677,3313049,3316912,3317247	3305643,3308836,3311948,3312768,3313175,3317022,3320003	Gene ID= ENSG00000162086.14 TPM= 1.93 Transcript Type= NA
chr16	3305406	3318574	3305406	3318574	+	ENST00000498240.6@ZNF75A	ENST00000498240.6	protein_coding	3305406,3308313,3311753,3312677,3316912,3317190	3305643,3308836,3311948,3312768,3317022,3318574	Gene ID= ENSG00000162086.14 TPM= 2.9 Transcript Type= processed_transcript
chr16	3283481	3318574	3283481	3318574	+	transcript901.chr16.nnic@ZNF75A	transcript901.chr16.nnic	protein_coding	3283481,3289393,3316912,3317190	3284205,3290553,3317022,3318574	Gene ID= ENSG00000162086.14 TPM= 1.93 Transcript Type= NA
chr16	3305494	3309313	3305494	3309313	+	transcript908.chr16.nic@ZNF75A	transcript908.chr16.nic	protein_coding	3305494,3308313	3305643,3309313	Gene ID= ENSG00000162086.14 TPM= 1.93 Transcript Type= NA
chr16	3305494	3309483	3305494	3309483	+	transcript909.chr16.nic@ZNF75A	transcript909.chr16.nic	protein_coding	3305494,3308313	3305643,3309483	Gene ID= ENSG00000162086.14 TPM= 5.79 Transcript Type= NA
chr16	3305495	3309483	3305495	3309483	+	transcript913.chr16.nnic@ZNF75A	transcript913.chr16.nnic	protein_coding	3305495,3308313	3306406,3309483	Gene ID= ENSG00000162086.14 TPM= 4.83 Transcript Type= NA
chr16	3310536	3311446	3310536	3311446	+	transcript919.chr16.nnic@NA	transcript919.chr16.nnic	NA	3310536	3311446	Gene ID= novel_gene_chr16_920 TPM= 2.9 Transcript Type= NA
chr16	3365101	3397786	3365101	3397786	+	transcript929.chr16.nnic@AC025283.2	transcript929.chr16.nnic	protein_coding	3365101,3397203	3365182,3397786	Gene ID= ENSG00000262621.4 TPM= 1.93 Transcript Type= NA
chr16	3401244	3405079	3401244	3405079	+	ENST00000344823.9@ZNF174	ENST00000344823.9	protein_coding	3401244,3404426,3404909	3402406,3404648,3405079	Gene ID= ENSG00000103343.12 TPM= 8.69 Transcript Type= protein_coding
chr16	3432422	3443542	3432422	3443542	-	ENST00000301744.5@ZNF597	ENST00000301744.5	protein_coding	3443360,3443121,3440807,3432422	3443542,3443206,3440933,3437538	Gene ID= ENSG00000167981.5 TPM= 3.86 Transcript Type= protein_coding
chr16	3443682	3486952	3443682	3486952	+	transcript936.chr16.nic@NAA60	transcript936.chr16.nic	protein_coding	3443682,3447482,3448471,3476222,3479471,3482502,3483363,3484699,3485467	3443827,3447620,3448540,3476337,3479600,3482598,3483597,3485061,3486952	Gene ID= ENSG00000122390.17 TPM= 4.36 Transcript Type= NA
chr16	3443611	3486963	3443611	3486963	+	ENST00000407558.8@NAA60	ENST00000407558.8	protein_coding	3443611,3448471,3476222,3479471,3482502,3483363,3484699,3485467	3443837,3448540,3476337,3479600,3482598,3483597,3485061,3486963	Gene ID= ENSG00000122390.17 TPM= 4.36 Transcript Type= protein_coding
chr16	3443682	3486951	3443682	3486951	+	transcript941.chr16.nic@NAA60	transcript941.chr16.nic	protein_coding	3443682,3448471,3476222,3479471,3482502,3483363,3484699	3443827,3448540,3476337,3479600,3482598,3483597,3486951	Gene ID= ENSG00000122390.17 TPM= 8.55 Transcript Type= NA
chr16	3443682	3486952	3443682	3486952	+	transcript942.chr16.nic@NAA60	transcript942.chr16.nic	protein_coding	3443682,3448471,3476222,3479471,3482502,3484762,3485467	3443827,3448540,3476337,3479600,3482598,3485061,3486952	Gene ID= ENSG00000122390.17 TPM= 3.73 Transcript Type= NA
chr16	3458012	3486952	3458012	3486952	+	ENST00000414063.6@NAA60	ENST00000414063.6	protein_coding	3458012,3476222,3479471,3482502,3483363,3484699,3485467	3458181,3476337,3479600,3482598,3483597,3485083,3486952	Gene ID= ENSG00000122390.17 TPM= 12.41 Transcript Type= protein_coding
chr16	3458012	3486951	3458012	3486951	+	transcript947.chr16.nic@NAA60	transcript947.chr16.nic	protein_coding	3458012,3476222,3479471,3482502,3483363,3484699	3458181,3476337,3479600,3482598,3483597,3486951	Gene ID= ENSG00000122390.17 TPM= 16.28 Transcript Type= NA
chr16	3458078	3486952	3458078	3486952	+	ENST00000575076.5@NAA60	ENST00000575076.5	protein_coding	3458078,3476222,3479471,3482502,3483363,3484699,3485467	3458181,3476337,3479600,3482598,3483597,3485061,3486952	Gene ID= ENSG00000122390.17 TPM= 4.36 Transcript Type= protein_coding
chr16	3500924	3539048	3500924	3539048	+	ENST00000576634.5@CLUAP1	ENST00000576634.5	protein_coding	3500924,3504720,3506331,3508289,3512383,3515508,3519903,3523158,3526412,3530568,3532786,3536122	3501089,3504831,3506415,3508468,3512478,3515591,3520036,3523299,3526484,3530675,3532841,3539048	Gene ID= ENSG00000103351.12 TPM= 2.9 Transcript Type= protein_coding
chr16	3501007	3536470	3501007	3536470	+	transcript963.chr16.nic@CLUAP1	transcript963.chr16.nic	protein_coding	3501007,3506331,3508289,3512383,3515508,3519903,3523158,3526412,3530568,3532786,3536122	3501089,3506415,3508468,3512478,3515591,3520036,3523299,3526484,3530675,3532841,3536470	Gene ID= ENSG00000103351.12 TPM= 1.93 Transcript Type= NA
chr16	3500976	3528024	3500976	3528024	+	transcript965.chr16.nic@CLUAP1	transcript965.chr16.nic	protein_coding	3500976,3504720,3506331,3508289,3512383,3515508,3519903,3523158,3526412	3501089,3504831,3506415,3508468,3512478,3515591,3520036,3523299,3528024	Gene ID= ENSG00000103351.12 TPM= 1.93 Transcript Type= NA
chr16	3581181	3611598	3581181	3611598	-	ENST00000294008.3@SLX4	ENST00000294008.3	protein_coding	3611560,3608430,3606474,3602118,3600979,3597797,3597379,3596153,3595605,3594453,3592699,3589002,3584769,3583097,3581181	3611598,3609566,3606698,3602307,3601191,3597999,3597695,3596393,3595693,3594599,3592865,3591310,3584871,3583510,3582693	Gene ID= ENSG00000188827.10 TPM= 3.86 Transcript Type= protein_coding
chr16	3658037	3717597	3658037	3717597	-	ENST00000246957.9@TRAP1	ENST00000246957.9	protein_coding	3717421,3690827,3689055,3685996,3679719,3677498,3676036,3675324,3674339,3672700,3671722,3665971,3664274,3663424,3662882,3661987,3658793,3658037	3717597,3690985,3689137,3686136,3679790,3677658,3676145,3675397,3674494,3672820,3671791,3666118,3664459,3663562,3662967,3662132,3658865,3658230	Gene ID= ENSG00000126602.10 TPM= 385.64 Transcript Type= protein_coding
chr16	3658038	3717513	3658038	3717513	-	ENST00000538171.5@TRAP1	ENST00000538171.5	protein_coding	3717421,3689055,3685996,3679719,3677498,3676036,3675324,3674339,3672700,3671722,3665971,3664274,3663424,3662882,3661987,3658793,3658038	3717513,3689137,3686136,3679790,3677658,3676145,3675397,3674494,3672820,3671791,3666118,3664459,3663562,3662967,3662132,3658865,3658230	Gene ID= ENSG00000126602.10 TPM= 27.51 Transcript Type= protein_coding
chr16	3726651	3729001	3726651	3729001	-	transcript978.chr16.nnic@NA	transcript978.chr16.nnic	NA	3726651	3729001	Gene ID= novel_gene_chr16_979 TPM= 3.86 Transcript Type= NA
chr16	3773636	3880764	3773636	3880764	-	transcript981.chr16.nic@CREBBP	transcript981.chr16.nic	protein_coding	3879832,3850297,3810603,3793386,3791981,3782684,3781204,3780732,3778700,3778011,3777613,3774569,3773636	3880764,3851009,3810779,3793626,3792094,3782926,3781306,3780878,3778817,3778182,3777657,3774693,3773930	Gene ID= ENSG00000005339.14 TPM= 7.4 Transcript Type= NA
chr16	3773636	3880764	3773636	3880764	-	transcript983.chr16.nic@CREBBP	transcript983.chr16.nic	protein_coding	3879832,3850297,3810603,3793386,3791981,3782684,3781204,3780732,3778700,3778011,3774569,3773636	3880764,3851009,3810779,3793626,3792094,3782926,3781306,3780878,3778817,3778182,3774693,3773930	Gene ID= ENSG00000005339.14 TPM= 13.68 Transcript Type= NA
chr16	3965643	4116540	3965643	4116540	-	transcript989.chr16.nic@ADCY9	transcript989.chr16.nic	protein_coding	4115690,4113750,4007368,3993349,3992146,3988994,3983232,3979116,3977482,3974669,3965643	4116540,4115485,4007558,3993510,3992363,3989096,3983440,3979275,3977630,3974710,3966966	Gene ID= ENSG00000162104.9 TPM= 16.41 Transcript Type= NA
chr16	3962651	4116185	3962651	4116185	-	ENST00000294016.7@ADCY9	ENST00000294016.7	protein_coding	4115690,4113750,4007368,3993406,3992146,3988994,3983232,3979116,3977482,3974669,3962651	4116185,4115485,4007558,3993510,3992363,3989096,3983440,3979275,3977630,3974710,3966966	Gene ID= ENSG00000162104.9 TPM= 35.72 Transcript Type= protein_coding
chr16	4114878	4117339	4114878	4117339	+	transcript1000.chr16.nnic@NA	transcript1000.chr16.nnic	NA	4114878	4117339	Gene ID= novel_gene_chr16_1001 TPM= 1.93 Transcript Type= NA
chr16	4189374	4242082	4189374	4242082	-	transcript1015.chr16.nnic@SRL	transcript1015.chr16.nnic	protein_coding	4242007,4204533,4203166,4197799,4195553,4193386,4189374	4242082,4204634,4203261,4197915,4195786,4193443,4192964	Gene ID= ENSG00000185739.13 TPM= 74.21 Transcript Type= NA
chr16	4189374	4242083	4189374	4242083	-	transcript1018.chr16.nnic@SRL	transcript1018.chr16.nnic	protein_coding	4242007,4206953,4204533,4203166,4197799,4195553,4189374	4242083,4208104,4204634,4203261,4197915,4195786,4192964	Gene ID= ENSG00000185739.13 TPM= 59.84 Transcript Type= NA
chr16	4189374	4242082	4189374	4242082	-	transcript1021.chr16.nnic@SRL	transcript1021.chr16.nnic	protein_coding	4242007,4213706,4204533,4203166,4197799,4195553,4189374	4242082,4213835,4204634,4203261,4197915,4195786,4192964	Gene ID= ENSG00000185739.13 TPM= 50.19 Transcript Type= NA
chr16	4189374	4242080	4189374	4242080	-	ENST00000399609.7@SRL	ENST00000399609.7	protein_coding	4242007,4204533,4203166,4197799,4195553,4189374	4242080,4204634,4203261,4197915,4195786,4192964	Gene ID= ENSG00000185739.13 TPM= 752.93 Transcript Type= protein_coding
chr16	4189374	4242075	4189374	4242075	-	ENST00000572111.1@SRL	ENST00000572111.1	protein_coding	4242007,4206727,4204533,4203166,4197799,4195553,4189374	4242075,4208104,4204634,4203261,4197915,4195786,4192964	Gene ID= ENSG00000185739.13 TPM= 93.63 Transcript Type= nonsense_mediated_decay
chr16	4257186	4273075	4257186	4273075	-	ENST00000204517.10@TFAP4	ENST00000204517.10	protein_coding	4272658,4262536,4262324,4261779,4260455,4260090,4257186	4273075,4262701,4262422,4261949,4260595,4260245,4258249	Gene ID= ENSG00000090447.11 TPM= 1.93 Transcript Type= protein_coding
chr16	4340251	4351293	4340251	4351293	-	transcript1073.chr16.nnic@PAM16	transcript1073.chr16.nnic	protein_coding	4351232,4343483,4343207,4341368,4340920,4340251	4351293,4343616,4343291,4341504,4340985,4340405	Gene ID= ENSG00000217930.7 TPM= 7.48 Transcript Type= NA
chr16	4340248	4351372	4340248	4351372	-	ENST00000318059.7@PAM16	ENST00000318059.7	protein_coding	4351232,4343207,4341368,4340920,4340248	4351372,4343291,4341504,4340985,4340405	Gene ID= ENSG00000217930.7 TPM= 62.5 Transcript Type= protein_coding
chr16	4340251	4351270	4340251	4351270	-	ENST00000573614.5@PAM16	ENST00000573614.5	protein_coding	4351232,4343207,4341368,4340920,4340251	4351270,4343291,4341672,4340985,4340405	Gene ID= ENSG00000217930.7 TPM= 2.17 Transcript Type= processed_transcript
chr16	4340251	4351315	4340251	4351315	-	ENST00000571986.5@PAM16	ENST00000571986.5	protein_coding	4351232,4343207,4341368,4340920,4340251	4351315,4343291,4341583,4340985,4340405	Gene ID= ENSG00000217930.7 TPM= 3.14 Transcript Type= nonsense_mediated_decay
chr16	4354542	4416664	4354542	4416664	-	ENST00000251166.8@CORO7	ENST00000251166.8	protein_coding	4416459,4413308,4412356,4408181,4407501,4405491,4395289,4388545,4387986,4365491,4365003,4364775,4364597,4364276,4362612,4361985,4361361,4361162,4360943,4360444,4360278,4359480,4359296,4358367,4357968,4357168,4355286,4354542	4416664,4413404,4412430,4408251,4407684,4405567,4395339,4388631,4388068,4365545,4365060,4364920,4364689,4364413,4362738,4362160,4361469,4361248,4361085,4360548,4360363,4359621,4359385,4358483,4358103,4357259,4355372,4355163	Gene ID= ENSG00000262246.5 TPM= 6.76 Transcript Type= protein_coding
chr16	4371848	4383528	4371848	4383528	+	ENST00000304735.3@VASN	ENST00000304735.3	protein_coding	4371848,4380869	4371993,4383528	Gene ID= ENSG00000168140.4 TPM= 17.38 Transcript Type= protein_coding
chr16	4425805	4456775	4425805	4456775	+	ENST00000262375.10@DNAJA3	ENST00000262375.10	protein_coding	4425805,4434384,4437402,4441375,4442268,4443017,4444664,4446886,4448733,4450400,4454811,4455546	4426092,4434517,4437485,4441575,4442420,4443164,4444728,4447014,4448848,4450497,4454927,4456775	Gene ID= ENSG00000103423.13 TPM= 129.91 Transcript Type= protein_coding
chr16	4425860	4456775	4425860	4456775	+	ENST00000355296.8@DNAJA3	ENST00000355296.8	protein_coding	4425860,4434384,4437402,4441375,4442268,4443017,4444664,4446886,4448733,4450400,4455546	4426092,4434517,4437485,4441575,4442420,4443164,4444728,4447014,4448848,4450497,4456775	Gene ID= ENSG00000103423.13 TPM= 171.9 Transcript Type= protein_coding
chr16	4461695	4474643	4461695	4474643	-	ENST00000574425.5@NMRAL1	ENST00000574425.5	protein_coding	4474423,4474093,4469227,4466153,4463660,4461695	4474643,4474166,4469465,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 3.38 Transcript Type= protein_coding
chr16	4461680	4474895	4461680	4474895	-	ENST00000283429.10@NMRAL1	ENST00000283429.10	protein_coding	4474554,4474093,4469227,4466153,4463660,4461680	4474895,4474166,4469465,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 1.45 Transcript Type= protein_coding
chr16	4475924	4510347	4475924	4510347	+	ENST00000570646.5@HMOX2	ENST00000570646.5	protein_coding	4475924,4505484,4506895,4507713,4509412,4509629	4476487,4505610,4507012,4508204,4509538,4510347	Gene ID= ENSG00000103415.11 TPM= 31.86 Transcript Type= protein_coding
chr16	4510675	4538470	4510675	4538470	-	ENST00000563332.6@CDIP1	ENST00000563332.6	protein_coding	4538325,4514575,4514046,4513696,4512791,4510675	4538470,4514664,4514144,4513851,4513064,4512683	Gene ID= ENSG00000089486.16 TPM= 5.79 Transcript Type= protein_coding
chr16	4511324	4538784	4511324	4538784	-	ENST00000567695.5@CDIP1	ENST00000567695.5	protein_coding	4538702,4514575,4514046,4513696,4512791,4511324	4538784,4514664,4514144,4513851,4513064,4512683	Gene ID= ENSG00000089486.16 TPM= 31.86 Transcript Type= protein_coding
chr16	4608883	4614926	4608883	4614926	-	ENST00000283474.11@UBALD1	ENST00000283474.11	protein_coding	4614678,4610493,4608883	4614926,4610555,4609983	Gene ID= ENSG00000153443.12 TPM= 50.68 Transcript Type= protein_coding
chr16	4608883	4612275	4608883	4612275	-	transcript1124.chr16.nic@UBALD1	transcript1124.chr16.nic	protein_coding	4610493,4608883	4612275,4609983	Gene ID= ENSG00000153443.12 TPM= 3.86 Transcript Type= NA
chr16	4608883	4614881	4608883	4614881	-	ENST00000591401.5@UBALD1	ENST00000591401.5	protein_coding	4614678,4608883	4614881,4609983	Gene ID= ENSG00000153443.12 TPM= 19.79 Transcript Type= protein_coding
chr16	4624790	4690974	4624790	4690974	+	ENST00000262370.11@MGRN1	ENST00000262370.11	protein_coding	4624790,4650365,4651963,4652678,4657246,4664709,4665102,4668265,4671391,4673498,4677463,4680032,4681550,4682823,4683224,4683843,4688796	4625048,4650483,4652051,4652824,4657363,4664775,4665151,4668312,4671459,4673657,4677572,4680097,4681776,4682946,4683269,4683932,4690974	Gene ID= ENSG00000102858.12 TPM= 27.03 Transcript Type= protein_coding
chr16	4624807	4659182	4624807	4659182	+	transcript1131.chr16.nnic@MGRN1	transcript1131.chr16.nnic	protein_coding	4624807,4650365,4651963,4652678,4657246,4658183	4625048,4650483,4652051,4652824,4657363,4659182	Gene ID= ENSG00000102858.12 TPM= 1.93 Transcript Type= NA
chr16	4693694	4695859	4693694	4695859	+	ENST00000304301.10@NUDT16L1	ENST00000304301.10	protein_coding	4693694,4693978,4694958	4693879,4694238,4695859	Gene ID= ENSG00000168101.14 TPM= 11.58 Transcript Type= protein_coding
chr16	4696510	4734265	4696510	4734265	-	transcript1137.chr16.nic@ANKS3	transcript1137.chr16.nic	protein_coding	4734156,4731512,4729980,4726979,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696510	4734265,4731579,4730151,4727177,4726780,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 4.05 Transcript Type= NA
chr16	4696510	4734265	4696510	4734265	-	transcript1141.chr16.nic@ANKS3	transcript1141.chr16.nic	protein_coding	4734156,4729980,4726979,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696510	4734265,4730151,4727177,4726780,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 6.95 Transcript Type= NA
chr16	4696510	4734265	4696510	4734265	-	transcript1142.chr16.nic@ANKS3	transcript1142.chr16.nic	protein_coding	4734156,4729980,4726979,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696510	4734265,4730151,4727177,4726854,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 3.09 Transcript Type= NA
chr16	4696510	4734265	4696510	4734265	-	transcript1143.chr16.nic@ANKS3	transcript1143.chr16.nic	protein_coding	4734156,4729980,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696510	4734265,4730151,4726780,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 4.05 Transcript Type= NA
chr16	4696510	4734377	4696510	4734377	-	ENST00000450067.6@ANKS3	ENST00000450067.6	protein_coding	4734156,4729980,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696510	4734377,4730151,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 3.09 Transcript Type= protein_coding
chr16	4796968	4802950	4796968	4802950	-	ENST00000322048.11@ROGDI	ENST00000322048.11	protein_coding	4802527,4802382,4801503,4801267,4800498,4799686,4798569,4798071,4797938,4797714,4796968	4802950,4802453,4801585,4801321,4800578,4799781,4798667,4798184,4797987,4797840,4797501	Gene ID= ENSG00000067836.12 TPM= 27.03 Transcript Type= protein_coding
chr16	4796969	4802633	4796969	4802633	-	ENST00000587843.5@ROGDI	ENST00000587843.5	protein_coding	4802527,4802382,4801503,4800498,4799686,4798569,4798071,4797938,4797714,4796969	4802633,4802453,4801585,4800578,4799781,4798667,4798184,4797987,4797840,4797501	Gene ID= ENSG00000067836.12 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr16	4803203	4847309	4803203	4847309	-	transcript1158.chr16.nic@GLYR1	transcript1158.chr16.nic	protein_coding	4847228,4846174,4845074,4832774,4831979,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4804522,4803203	4847309,4846210,4845153,4832912,4832221,4823907,4822931,4821597,4821453,4817697,4814629,4813838,4812248,4811802,4811294,4805310,4804148	Gene ID= ENSG00000140632.16 TPM= 7.24 Transcript Type= NA
chr16	4803203	4847342	4803203	4847342	-	ENST00000321919.13@GLYR1	ENST00000321919.13	protein_coding	4847228,4846174,4845074,4832774,4831979,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4803203	4847342,4846210,4845153,4832912,4832221,4823907,4822931,4821597,4821453,4817697,4814647,4813838,4812248,4811802,4811294,4805310	Gene ID= ENSG00000140632.16 TPM= 19.14 Transcript Type= protein_coding
chr16	4820498	4847309	4820498	4847309	-	transcript1181.chr16.nic@GLYR1	transcript1181.chr16.nic	protein_coding	4847228,4846174,4845074,4832774,4831979,4823821,4822875,4821547,4820498	4847309,4846210,4845153,4832912,4832221,4823907,4822931,4821597,4821453	Gene ID= ENSG00000140632.16 TPM= 1.93 Transcript Type= NA
chr16	4803203	4847279	4803203	4847279	-	ENST00000436648.9@GLYR1	ENST00000436648.9	protein_coding	4847228,4846174,4845074,4832774,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4803203	4847279,4846210,4845153,4832912,4823907,4822931,4821597,4821453,4817697,4814647,4813838,4812248,4811802,4811294,4805310	Gene ID= ENSG00000140632.16 TPM= 9.17 Transcript Type= protein_coding
chr16	4847433	4859968	4847433	4859968	+	transcript1191.chr16.nic@UBN1	transcript1191.chr16.nic	protein_coding	4847433,4852879,4857990,4858568,4859025,4859865	4848210,4853166,4858076,4858663,4859159,4859968	Gene ID= ENSG00000118900.14 TPM= 2.9 Transcript Type= NA
chr16	4846665	4859129	4846665	4859129	+	ENST00000592120.5@UBN1	ENST00000592120.5	protein_coding	4846665,4852879,4857990,4858568,4859025	4848393,4853166,4858076,4858663,4859129	Gene ID= ENSG00000118900.14 TPM= 2.9 Transcript Type= protein_coding
chr16	4891443	4937144	4891443	4937144	-	transcript1198.chr16.nic@PPL	transcript1198.chr16.nic	protein_coding	4936984,4910850,4903886,4902406,4900964,4900830,4899223,4899013,4897675,4895594,4895261,4894467,4893541,4893213,4892035,4891443	4937144,4910949,4904040,4902526,4901089,4900871,4899384,4899120,4897770,4895716,4895407,4894618,4893638,4893370,4892213,4891949	Gene ID= ENSG00000118898.15 TPM= 1.93 Transcript Type= NA
chr16	4882507	4937135	4882507	4937135	-	ENST00000345988.6@PPL	ENST00000345988.6	protein_coding	4936984,4910850,4903886,4902406,4900964,4900830,4899223,4899013,4897675,4895594,4895261,4894467,4893541,4893213,4892035,4891811,4890728,4890184,4888978,4888102,4887135,4882507	4937135,4910949,4904040,4902526,4901089,4900871,4899384,4899120,4897770,4895716,4895407,4894618,4893638,4893370,4892213,4891949,4890921,4890334,4889061,4888218,4887227,4886047	Gene ID= ENSG00000118898.15 TPM= 13.51 Transcript Type= protein_coding
chr16	5024872	5033930	5024872	5033930	-	transcript1206.chr16.nic@NAGPA	transcript1206.chr16.nic	protein_coding	5033273,5031745,5030385,5028880,5027980,5027846,5027278,5027135,5024872	5033930,5031884,5030493,5029008,5028185,5027893,5027379,5027198,5025685	Gene ID= ENSG00000103174.11 TPM= 4.34 Transcript Type= NA
chr16	5024844	5033934	5024844	5033934	-	ENST00000312251.7@NAGPA	ENST00000312251.7	protein_coding	5033829,5033273,5031745,5030385,5028880,5027980,5027846,5027278,5027135,5024844	5033934,5033728,5031884,5030493,5029008,5028185,5027893,5027379,5027198,5025685	Gene ID= ENSG00000103174.11 TPM= 14 Transcript Type= protein_coding
chr16	5071819	5085587	5071819	5085587	+	ENST00000262374.9@ALG1	ENST00000262374.9	protein_coding	5071819,5072951,5073153,5075388,5077445,5077907,5078757,5079064,5079748,5080946,5082559,5083682,5084750	5072057,5073028,5073256,5075536,5077534,5078017,5078878,5079102,5079807,5081056,5082673,5083757,5085587	Gene ID= ENSG00000033011.11 TPM= 5.79 Transcript Type= protein_coding
chr16	5084304	5097754	5084304	5097754	-	transcript1217.chr16.nic@EEF2KMT	transcript1217.chr16.nic	protein_coding	5097644,5097280,5095452,5093484,5091794,5090432,5090084,5089107,5084304	5097754,5097353,5095514,5093564,5091895,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 3.38 Transcript Type= NA
chr16	5084304	5097755	5084304	5097755	-	transcript1221.chr16.nic@EEF2KMT	transcript1221.chr16.nic	protein_coding	5097280,5095452,5093484,5091794,5090432,5090084,5089107,5084304	5097755,5095514,5093564,5091895,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 3.38 Transcript Type= NA
chr16	5084304	5097808	5084304	5097808	-	ENST00000427587.8@EEF2KMT	ENST00000427587.8	protein_coding	5097644,5095452,5093484,5091794,5090432,5090084,5089107,5084304	5097808,5095514,5093564,5091895,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 13.03 Transcript Type= protein_coding
chr16	5084304	5097788	5084304	5097788	-	ENST00000458008.8@EEF2KMT	ENST00000458008.8	protein_coding	5097644,5095452,5093484,5090432,5090084,5089107,5084304	5097788,5095514,5093564,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 4.34 Transcript Type= protein_coding
chr16	7592981	7594129	7592981	7594129	-	transcript1249.chr16.nnic@NA	transcript1249.chr16.nnic	NA	7592981	7594129	Gene ID= novel_gene_chr16_1250 TPM= 1.93 Transcript Type= NA
chr16	7709764	7710856	7709764	7710856	+	transcript1247.chr16.nnic@NA	transcript1247.chr16.nnic	NA	7709764	7710856	Gene ID= novel_gene_chr16_1248 TPM= 1.93 Transcript Type= NA
chr16	8621710	8646218	8621710	8646218	+	transcript1257.chr16.nic@METTL22	transcript1257.chr16.nic	protein_coding	8621710,8625496,8628730,8635039,8635168,8639091,8641131,8642127,8642463,8644557,8646108	8624118,8625798,8629110,8635079,8635312,8639162,8641184,8642207,8642565,8644725,8646218	Gene ID= ENSG00000067365.14 TPM= 22.52 Transcript Type= NA
chr16	8621682	8646218	8621682	8646218	+	transcript1261.chr16.nnic@METTL22	transcript1261.chr16.nnic	protein_coding	8621682,8625496,8628730,8635039,8635168,8639091,8641131,8642127,8642463,8646108	8621775,8625798,8629110,8635079,8635312,8639162,8641184,8642207,8642565,8646218	Gene ID= ENSG00000067365.14 TPM= 7.4 Transcript Type= NA
chr16	8621691	8646224	8621691	8646224	+	ENST00000163678.11@METTL22	ENST00000163678.11	protein_coding	8621691,8625496,8628730,8635168,8639091,8641131,8642127,8642463,8644557,8646108	8621775,8625798,8629110,8635312,8639162,8641184,8642207,8642565,8644725,8646224	Gene ID= ENSG00000067365.14 TPM= 12.87 Transcript Type= nonsense_mediated_decay
chr16	8797817	8849331	8797817	8849331	+	ENST00000268261.8@PMM2	ENST00000268261.8	protein_coding	8797817,8801799,8804767,8806316,8811079,8811638,8812991,8847724	8797948,8801910,8804843,8806407,8811178,8811713,8813106,8849331	Gene ID= ENSG00000140650.11 TPM= 38.61 Transcript Type= protein_coding
chr16	8807165	8809968	8807165	8809968	-	transcript1286.chr16.nnic@NA	transcript1286.chr16.nnic	NA	8807165	8809968	Gene ID= novel_gene_chr16_1287 TPM= 2.9 Transcript Type= NA
chr16	8852943	8869012	8852943	8869012	-	ENST00000611932.4@CARHSP1	ENST00000611932.4	protein_coding	8868966,8860105,8859171,8858350,8852943	8869012,8860218,8859335,8858472,8855326	Gene ID= ENSG00000153048.10 TPM= 1.93 Transcript Type= protein_coding
chr16	8854913	8869009	8854913	8869009	-	ENST00000311052.9@CARHSP1	ENST00000311052.9	protein_coding	8868966,8859171,8858350,8854913	8869009,8859335,8858472,8855326	Gene ID= ENSG00000153048.10 TPM= 3.86 Transcript Type= protein_coding
chr16	8892772	8963966	8892772	8963966	-	transcript1294.chr16.nnic@USP7	transcript1294.chr16.nnic	protein_coding	8963618,8963207,8930293,8923215,8921157,8920359,8919031,8917026,8916502,8915445,8915254,8910745,8908341,8906426,8905187,8904435,8903268,8902381,8902082,8901142,8900990,8900530,8899604,8899121,8898531,8898360,8896999,8895642,8895031,8894784,8894550,8892772	8963966,8963434,8930397,8923413,8921295,8920447,8919139,8917156,8916556,8915525,8915344,8910827,8908450,8906582,8905331,8904565,8903402,8902482,8902187,8901234,8901057,8900630,8899757,8899188,8898639,8898437,8897099,8895741,8895150,8894855,8894640,8894104	Gene ID= ENSG00000187555.14 TPM= 12.87 Transcript Type= NA
chr16	8957887	8959368	8957887	8959368	+	transcript1326.chr16.nnic@NA	transcript1326.chr16.nnic	NA	8957887	8959368	Gene ID= novel_gene_chr16_1327 TPM= 1.93 Transcript Type= NA
chr16	10528422	10580698	10528422	10580698	-	ENST00000359543.7@EMP2	ENST00000359543.7	protein_coding	10580549,10547540,10543570,10537928,10528422	10580698,10547677,10543660,10538074,10533092	Gene ID= ENSG00000213853.9 TPM= 9.65 Transcript Type= protein_coding
chr16	10743820	10769351	10743820	10769351	+	transcript1355.chr16.nic@NUBP1	transcript1355.chr16.nic	protein_coding	10743820,10743961,10747143,10752610,10755721,10756690,10757873,10761364,10761757,10769047	10743882,10744065,10747276,10752678,10755753,10756780,10758027,10761474,10761859,10769351	Gene ID= ENSG00000103274.10 TPM= 2.41 Transcript Type= NA
chr16	10743845	10769351	10743845	10769351	+	ENST00000283027.9@NUBP1	ENST00000283027.9	protein_coding	10743845,10743961,10747143,10752610,10755721,10756690,10757873,10761364,10761757,10767949,10769047	10743882,10744065,10747276,10752678,10755753,10756780,10758027,10761474,10761859,10768032,10769351	Gene ID= ENSG00000103274.10 TPM= 14 Transcript Type= protein_coding
chr16	10928891	10942468	10928891	10942468	-	transcript1366.chr16.nnic@DEXI	transcript1366.chr16.nnic	protein_coding	10941569,10933900,10928891	10942468,10934004,10929559	Gene ID= ENSG00000182108.9 TPM= 5.63 Transcript Type= NA
chr16	10928891	10942460	10928891	10942460	-	ENST00000331808.4@DEXI	ENST00000331808.4	protein_coding	10941569,10928891	10942460,10929559	Gene ID= ENSG00000182108.9 TPM= 220.89 Transcript Type= protein_coding
chr16	10940719	10943021	10940719	10943021	+	ENST00000573379.1@AC133065.2	ENST00000573379.1	antisense_RNA	10940719,10941186	10941029,10943021	Gene ID= ENSG00000262222.1 TPM= 22.52 Transcript Type= antisense_RNA
chr16	10944553	11126324	10944553	11126324	+	transcript1360.chr16.nic@CLEC16A	transcript1360.chr16.nic	protein_coding	10944553,10957782,10962455,10969161,10971125,10972938,10977225,10979329,10982878,11003074,11020193,11024821,11039754,11042254,11044028,11047292,11051513,11060902,11120615,11123742,11125979	10944797,10957910,10962588,10969309,10971230,10973061,10977399,10979382,10982991,11003305,11020325,11024921,11039876,11042363,11044072,11047342,11051641,11061022,11120766,11123946,11126324	Gene ID= ENSG00000038532.14 TPM= 2.9 Transcript Type= NA
chr16	11174888	11177007	11174888	11177007	+	transcript1373.chr16.nnic@NA	transcript1373.chr16.nnic	NA	11174888	11177007	Gene ID= novel_gene_chr16_1374 TPM= 1.93 Transcript Type= NA
chr16	11178471	11181921	11178471	11181921	+	transcript1371.chr16.nnic@NA	transcript1371.chr16.nnic	NA	11178471	11181921	Gene ID= novel_gene_chr16_1372 TPM= 5.79 Transcript Type= NA
chr16	11254405	11256179	11254405	11256179	-	ENST00000332029.2@SOCS1	ENST00000332029.2	protein_coding	11256079,11254405	11256179,11255528	Gene ID= ENSG00000185338.4 TPM= 21.24 Transcript Type= protein_coding
chr16	11548603	11556736	11548603	11556736	-	ENST00000381810.7@LITAF	ENST00000381810.7	protein_coding	11556511,11553533,11548603	11556736,11553689,11549746	Gene ID= ENSG00000189067.12 TPM= 1.93 Transcript Type= protein_coding
chr16	11675794	11677268	11675794	11677268	+	transcript1404.chr16.nnic@SNN	transcript1404.chr16.nnic	protein_coding	11675794,11675975	11675829,11677268	Gene ID= ENSG00000184602.5 TPM= 2.9 Transcript Type= NA
chr16	11668414	11679159	11668414	11679159	+	ENST00000329565.5@SNN	ENST00000329565.5	protein_coding	11668414,11675975	11668540,11679159	Gene ID= ENSG00000184602.5 TPM= 352.34 Transcript Type= protein_coding
chr16	11679083	11742823	11679083	11742823	-	transcript1383.chr16.nnic@TXNDC11	transcript1383.chr16.nnic	protein_coding	11742477,11736017,11733982,11730645,11725797,11721577,11700452,11698125,11691290,11688303,11687857,11684165,11679083	11742823,11736233,11734079,11730774,11726178,11721670,11700564,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 2.12 Transcript Type= NA
chr16	11679083	11742829	11679083	11742829	-	transcript1386.chr16.nic@TXNDC11	transcript1386.chr16.nic	protein_coding	11742477,11736017,11733982,11721577,11700452,11698125,11691290,11688303,11687857,11684165,11679083	11742829,11736233,11734079,11721670,11700564,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 3.09 Transcript Type= NA
chr16	11679083	11742884	11679083	11742884	-	transcript1388.chr16.nic@TXNDC11	transcript1388.chr16.nic	protein_coding	11742477,11736017,11733982,11730645,11721577,11698125,11691290,11688303,11687857,11684165,11679083	11742884,11736233,11734079,11730774,11721670,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 7.92 Transcript Type= NA
chr16	11679083	11742884	11679083	11742884	-	transcript1389.chr16.nic@TXNDC11	transcript1389.chr16.nic	protein_coding	11742477,11736017,11733982,11721577,11698125,11691290,11688303,11687857,11684165,11679083	11742884,11736233,11734079,11721670,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 7.92 Transcript Type= NA
chr16	11679080	11742878	11679080	11742878	-	ENST00000283033.9@TXNDC11	ENST00000283033.9	protein_coding	11742477,11736017,11733982,11730645,11721577,11700452,11698125,11691290,11688303,11687857,11684165,11679080	11742878,11736233,11734079,11730774,11721670,11700564,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 36.87 Transcript Type= protein_coding
chr16	11750586	11797267	11750586	11797267	-	ENST00000355758.8@ZC3H7A	ENST00000355758.8	protein_coding	11797124,11782287,11781425,11779166,11776751,11776452,11776320,11774980,11774236,11770783,11769031,11768315,11767417,11765489,11765053,11763478,11762671,11761910,11761406,11758431,11756237,11752669,11750586	11797267,11782388,11781464,11779363,11776909,11776532,11776358,11775013,11774519,11770987,11769095,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11761511,11758539,11756370,11752832,11751506	Gene ID= ENSG00000122299.11 TPM= 36.2 Transcript Type= protein_coding
chr16	11750595	11797281	11750595	11797281	-	transcript1412.chr16.nnic@ZC3H7A	transcript1412.chr16.nnic	protein_coding	11797124,11782287,11781425,11779166,11776751,11776452,11776320,11774980,11774236,11770783,11768315,11767417,11765489,11765053,11763478,11762550,11761910,11761406,11758431,11756237,11752669,11750595	11797281,11782388,11781464,11779363,11776909,11776532,11776358,11775013,11774519,11770987,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11761511,11758539,11756370,11752832,11751506	Gene ID= ENSG00000122299.11 TPM= 1.93 Transcript Type= NA
chr16	11750595	11797281	11750595	11797281	-	transcript1415.chr16.nic@ZC3H7A	transcript1415.chr16.nic	protein_coding	11797124,11782287,11781425,11779166,11776751,11776452,11776320,11774980,11774236,11770783,11768315,11767417,11765489,11765053,11763478,11762671,11761910,11761406,11758431,11756237,11752669,11750595	11797281,11782388,11781464,11779363,11776909,11776532,11776358,11775013,11774519,11770987,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11761511,11758539,11756370,11752832,11751506	Gene ID= ENSG00000122299.11 TPM= 6.76 Transcript Type= NA
chr16	11750595	11797228	11750595	11797228	-	transcript1417.chr16.nnic@ZC3H7A	transcript1417.chr16.nnic	protein_coding	11797124,11782287,11781425,11779166,11776751,11776452,11776320,11774980,11774236,11770783,11769031,11768315,11767417,11765489,11765053,11763478,11762671,11761910,11758431,11756237,11752669,11750595	11797228,11782388,11781464,11779363,11776909,11776532,11776358,11775013,11774519,11770987,11769095,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11758539,11756370,11752832,11751506	Gene ID= ENSG00000122299.11 TPM= 1.93 Transcript Type= NA
chr16	11756322	11797281	11756322	11797281	-	transcript1418.chr16.nic@ZC3H7A	transcript1418.chr16.nic	protein_coding	11797124,11782287,11781425,11779166,11776751,11776452,11776320,11774980,11774236,11770783,11769031,11768315,11767417,11765489,11765053,11763478,11762671,11761910,11761406,11758431,11756322	11797281,11782388,11781464,11779363,11776909,11776532,11776358,11775013,11774519,11770987,11769095,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11761511,11758539,11756370	Gene ID= ENSG00000122299.11 TPM= 3.38 Transcript Type= NA
chr16	11796798	11796989	11796798	11796989	-	transcript1426.chr16.nnic@NA	transcript1426.chr16.nnic	NA	11796798	11796989	Gene ID= novel_gene_chr16_1427 TPM= 1.93 Transcript Type= NA
chr16	11839947	11851590	11839947	11851590	-	transcript1433.chr16.nic@RSL1D1	transcript1433.chr16.nic	protein_coding	11851408,11850279,11847668,11846695,11846501,11841907,11841695,11839947	11851590,11850418,11847806,11846843,11846602,11842000,11841820,11839985	Gene ID= ENSG00000171490.12 TPM= 37.65 Transcript Type= NA
chr16	11841708	11851542	11841708	11851542	-	ENST00000570767.5@RSL1D1	ENST00000570767.5	protein_coding	11851404,11850279,11847668,11846695,11846501,11841907,11841708	11851542,11850413,11847806,11846843,11846602,11842000,11841820	Gene ID= ENSG00000171490.12 TPM= 18.34 Transcript Type= nonsense_mediated_decay
chr16	11834292	11835455	11834292	11835455	-	transcript1436.chr16.nnic@NA	transcript1436.chr16.nnic	NA	11834292	11835455	Gene ID= novel_gene_chr16_1437 TPM= 2.9 Transcript Type= NA
chr16	11872679	11915878	11872679	11915878	-	ENST00000439887.6@GSPT1	ENST00000439887.6	protein_coding	11915369,11897994,11897840,11896558,11894954,11891062,11887570,11886777,11886471,11885181,11883015,11877407,11876086,11875761,11872679	11915878,11898035,11897881,11896782,11894987,11891139,11887750,11886931,11886611,11885274,11883095,11877580,11876175,11875929,11873171	Gene ID= ENSG00000103342.12 TPM= 96.05 Transcript Type= protein_coding
chr16	11976700	12373897	11976700	12373897	+	transcript1466.chr16.nnic@SNX29	transcript1466.chr16.nnic	protein_coding	11976700,11999297,12002991,12027320,12042897,12046384,12048372,12051847,12061528,12069057,12078833,12126633,12129630,12199601,12277933,12356163,12372824,12373002,12373669	11976813,11999358,12003043,12027444,12043077,12046454,12048620,12052222,12061646,12069132,12078915,12126696,12129758,12199683,12278036,12356279,12372909,12373028,12373897	Gene ID= ENSG00000048471.13 TPM= 1.93 Transcript Type= NA
chr16	11976700	12135737	11976700	12135737	+	transcript1468.chr16.nic@SNX29	transcript1468.chr16.nic	protein_coding	11976700,11999297,12002991,12027320,12042897,12046384,12048372,12051847,12061528,12069057,12078833,12126633,12129630,12135551	11976813,11999358,12003043,12027444,12043077,12046454,12048620,12052222,12061646,12069132,12078915,12126696,12129758,12135737	Gene ID= ENSG00000048471.13 TPM= 1.93 Transcript Type= NA
chr16	12659799	12804017	12659799	12804017	-	ENST00000381774.8@CPPED1	ENST00000381774.8	protein_coding	12803707,12781185,12704624,12659799	12804017,12781403,12705049,12665115	Gene ID= ENSG00000103381.11 TPM= 2.9 Transcript Type= protein_coding
chr16	13920157	13952345	13920157	13952345	+	ENST00000311895.7@ERCC4	ENST00000311895.7	protein_coding	13920157,13922031,13926561,13928028,13930710,13932157,13934192,13935146,13937766,13944723,13947614	13920372,13922211,13926756,13928235,13930890,13932285,13934302,13935743,13937858,13944835,13952345	Gene ID= ENSG00000175595.14 TPM= 3.86 Transcript Type= protein_coding
chr16	14302238	14303239	14302238	14303239	+	transcript1496.chr16.nnic@NA	transcript1496.chr16.nnic	NA	14302238	14303239	Gene ID= novel_gene_chr16_1497 TPM= 3.86 Transcript Type= NA
chr16	14435701	14630279	14435701	14630279	-	transcript1499.chr16.nnic@PARN	transcript1499.chr16.nnic	protein_coding	14630107,14629597,14628172,14627269,14627106,14617590,14610644,14609058,14608281,14606484,14604146,14599904,14593301,14588098,14586318,14584749,14584347,14582181,14580874,14555654,14554065,14552021,14482638,14446888,14435701	14630279,14629674,14628251,14627336,14627187,14617650,14610809,14609123,14608319,14606526,14604226,14599960,14593378,14588172,14586361,14584791,14584422,14582291,14580943,14555709,14554151,14552095,14482827,14447081,14436772	Gene ID= ENSG00000140694.16 TPM= 1.93 Transcript Type= NA
chr16	14435701	14630267	14435701	14630267	-	ENST00000437198.6@PARN	ENST00000437198.6	protein_coding	14630107,14629597,14628172,14627269,14627106,14617590,14610644,14609058,14608281,14606484,14604146,14599904,14593301,14586318,14584749,14584347,14582181,14580874,14555654,14554065,14552021,14482638,14446888,14435701	14630267,14629674,14628251,14627336,14627187,14617650,14610809,14609123,14608319,14606526,14604226,14599960,14593378,14586361,14584791,14584422,14582291,14580943,14555709,14554151,14552095,14482827,14447081,14436772	Gene ID= ENSG00000140694.16 TPM= 18.34 Transcript Type= protein_coding
chr16	14632815	14669236	14632815	14669236	+	ENST00000261658.6@BFAR	ENST00000261658.6	protein_coding	14632815,14644274,14648388,14649804,14655066,14661892,14664869,14667635	14633018,14644609,14648592,14649973,14655210,14662065,14665071,14669236	Gene ID= ENSG00000103429.10 TPM= 38.61 Transcript Type= protein_coding
chr16	14632910	14668851	14632910	14668851	+	transcript1518.chr16.nic@BFAR	transcript1518.chr16.nic	protein_coding	14632910,14644274,14649804,14655066,14661892,14664869,14667635	14633018,14644609,14649973,14655210,14662065,14665071,14668851	Gene ID= ENSG00000103429.10 TPM= 1.93 Transcript Type= NA
chr16	14632932	14650589	14632932	14650589	+	ENST00000562442.5@BFAR	ENST00000562442.5	protein_coding	14632932,14644274,14648388,14649804	14633018,14644609,14648592,14650589	Gene ID= ENSG00000103429.10 TPM= 8.69 Transcript Type= protein_coding
chr16	14833681	14896160	14833681	14896160	+	ENST00000287667.11@NOMO1	ENST00000287667.11	protein_coding	14833681,14838407,14841362,14844674,14846577,14848899,14852430,14853467,14853937,14857217,14857505,14863013,14864585,14865024,14866555,14868548,14871621,14872234,14875036,14875340,14876359,14876664,14878721,14880015,14881544,14882594,14884372,14886761,14889096,14894998,14895514	14834016,14838496,14841407,14844774,14846683,14848971,14852582,14853604,14854026,14857322,14857655,14863187,14864726,14865155,14866691,14868635,14871684,14872329,14875254,14875422,14876518,14876790,14878834,14880142,14881685,14882677,14884482,14886862,14889215,14895090,14896160	Gene ID= ENSG00000103512.14 TPM= 160.89 Transcript Type= protein_coding
chr16	14975000	15037688	14975000	15037688	+	transcript1548.chr16.nnic@PDXDC1	transcript1548.chr16.nnic	protein_coding	14975000,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15031735,15032861,15033278,15034286,15034457,15035449,15035951	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15031906,15032979,15033399,15034378,15034553,15035553,15037688	Gene ID= ENSG00000179889.18 TPM= 5.41 Transcript Type= NA
chr16	14975000	15037687	14975000	15037687	+	transcript1553.chr16.nnic@PDXDC1	transcript1553.chr16.nnic	protein_coding	14975000,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15028878,15029951,15031735,15032861,15033278,15034286,15034457,15035449,15036016	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15028966,15030056,15031906,15032979,15033399,15034378,15034553,15035553,15037687	Gene ID= ENSG00000179889.18 TPM= 7.34 Transcript Type= NA
chr16	14975000	15032653	14975000	15032653	+	transcript1568.chr16.nic@PDXDC1	transcript1568.chr16.nic	protein_coding	14975000,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15031735	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15032653	Gene ID= ENSG00000179889.18 TPM= 2.51 Transcript Type= NA
chr16	14975000	15139338	14975000	15139338	+	transcript1573.chr16.nnic@PDXDC1	transcript1573.chr16.nnic	protein_coding	14975000,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15138817	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030406,15139338	Gene ID= ENSG00000179889.18 TPM= 2.99 Transcript Type= NA
chr16	15028504	15151453	15028504	15151453	+	transcript1602.chr16.nnic@PDXDC1	transcript1602.chr16.nnic	protein_coding	15028504,15138817,15150199	15030406,15139950,15151453	Gene ID= ENSG00000179889.18 TPM= 58.88 Transcript Type= NA
chr16	14975012	15139339	14975012	15139339	+	ENST00000535621.6@PDXDC1	ENST00000535621.6	protein_coding	14975012,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15138879	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15139339	Gene ID= ENSG00000179889.18 TPM= 6.85 Transcript Type= protein_coding
chr16	15037854	15056079	15037854	15056079	-	ENST00000624579.3@NTAN1	ENST00000624579.3	protein_coding	15055891,15047855,15047442,15044334,15041623,15041068,15039969,15038574,15037854	15056079,15047920,15047550,15044407,15041676,15041121,15040066,15038687,15038210	Gene ID= ENSG00000157045.8 TPM= 17.38 Transcript Type= protein_coding
chr16	15037854	15056079	15037854	15056079	-	ENST00000622833.4@NTAN1	ENST00000622833.4	protein_coding	15055891,15047442,15044334,15041623,15041068,15039969,15038574,15037854	15056079,15047550,15044407,15041676,15041121,15040066,15038687,15038210	Gene ID= ENSG00000157045.8 TPM= 4.83 Transcript Type= protein_coding
chr16	15037853	15056064	15037853	15056064	-	ENST00000287706.7@NTAN1	ENST00000287706.7	protein_coding	15055891,15047997,15047855,15047442,15044334,15041623,15041068,15039969,15038574,15037853	15056064,15048099,15047920,15047550,15044407,15041676,15041121,15040066,15038687,15038210	Gene ID= ENSG00000157045.8 TPM= 21.24 Transcript Type= protein_coding
chr16	15060022	15094252	15060022	15094252	-	transcript1576.chr16.nnic@RRN3	transcript1576.chr16.nnic	protein_coding	15094145,15092509,15091315,15086365,15086129,15085639,15084642,15079998,15076558,15074723,15072950,15071121,15070070,15068169,15065219,15063196,15060022	15094252,15092614,15091371,15086454,15086258,15085698,15084705,15080096,15076650,15074861,15073080,15071251,15070254,15068277,15065371,15063283,15061905	Gene ID= ENSG00000085721.12 TPM= 1.93 Transcript Type= NA
chr16	15060022	15094317	15060022	15094317	-	ENST00000198767.10@RRN3	ENST00000198767.10	protein_coding	15094145,15092509,15091315,15086365,15086129,15085639,15084642,15083513,15079998,15076558,15074723,15072950,15071121,15070070,15068169,15065219,15063196,15060022	15094317,15092614,15091371,15086454,15086258,15085698,15084705,15083582,15080096,15076650,15074861,15073080,15071251,15070254,15068277,15065371,15063283,15061905	Gene ID= ENSG00000085721.12 TPM= 62.75 Transcript Type= protein_coding
chr16	15126659	15131499	15126659	15131499	-	ENST00000424133.2@PKD1P6	ENST00000424133.2	transcribed_unprocessed_pseudogene	15131074,15130635,15130202,15129882,15128222,15127992,15127687,15126659	15131499,15130791,15130454,15130077,15128389,15128135,15127897,15127596	Gene ID= ENSG00000250251.6 TPM= 9.65 Transcript Type= processed_transcript
chr16	15396112	15409683	15396112	15409683	+	transcript1608.chr16.nnic@MPV17L	transcript1608.chr16.nnic	protein_coding	15396112,15399451,15400787,15407824,15407933	15396207,15399548,15400857,15407853,15409683	Gene ID= ENSG00000156968.8 TPM= 39.58 Transcript Type= NA
chr16	15395754	15413268	15395754	15413268	+	ENST00000287594.7@MPV17L	ENST00000287594.7	protein_coding	15395754,15407824,15407933	15396207,15407853,15413268	Gene ID= ENSG00000156968.8 TPM= 2.9 Transcript Type= protein_coding
chr16	15401088	15402467	15401088	15402467	-	transcript1619.chr16.nnic@NA	transcript1619.chr16.nnic	NA	15401088	15402467	Gene ID= novel_gene_chr16_1620 TPM= 3.86 Transcript Type= NA
chr16	15434295	15588259	15434295	15588259	+	ENST00000300006.8@C16orf45	ENST00000300006.8	protein_coding	15434295,15515305,15567983,15581217,15583156,15586717	15434759,15515428,15568056,15581331,15583238,15588259	Gene ID= ENSG00000166780.10 TPM= 67.57 Transcript Type= protein_coding
chr16	15650209	15725149	15650209	15725149	+	transcript1643.chr16.nnic@NDE1	transcript1643.chr16.nnic	protein_coding	15650209,15664736,15667286,15677801,15687375,15691144,15694165,15724191	15650294,15664861,15667439,15677949,15687511,15691323,15694256,15725149	Gene ID= ENSG00000072864.14 TPM= 2.9 Transcript Type= NA
chr16	15703172	15857011	15703172	15857011	-	ENST00000396324.7@MYH11	ENST00000396324.7	protein_coding	15856941,15837908,15823255,15798660,15786630,15784698,15782385,15778780,15776078,15771569,15763796,15760540,15759576,15757827,15756341,15753394,15750138,15748047,15747874,15747570,15745129,15741760,15741463,15740051,15738565,15737449,15735366,15732564,15726848,15724888,15724647,15724161,15721422,15720839,15720151,15719585,15719220,15718315,15717140,15715164,15714909,15703172	15857011,15838269,15823411,15798687,15786732,15784718,15782477,15778843,15776176,15771712,15763891,15760658,15759728,15758000,15756514,15753508,15750331,15748168,15747943,15747730,15745237,15741891,15741669,15740188,15738688,15737620,15735578,15732708,15727054,15724992,15724799,15724409,15721634,15721051,15720312,15719713,15719308,15718438,15717348,15715272,15715081,15704123	Gene ID= ENSG00000133392.17 TPM= 8.69 Transcript Type= protein_coding
chr16	15703172	15857011	15703172	15857011	-	ENST00000452625.6@MYH11	ENST00000452625.6	protein_coding	15856941,15837908,15823255,15798660,15786630,15784698,15782385,15778780,15776078,15771569,15763796,15760540,15759576,15757827,15756341,15753394,15750138,15748047,15747874,15747570,15745129,15741760,15741463,15740051,15738565,15737449,15735366,15732564,15726848,15724888,15724647,15724161,15721422,15720839,15720151,15719585,15719220,15718315,15717140,15715164,15714909,15708803,15703172	15857011,15838269,15823411,15798687,15786732,15784718,15782477,15778843,15776176,15771712,15763891,15760658,15759728,15758000,15756514,15753508,15750331,15748168,15747943,15747730,15745237,15741891,15741669,15740188,15738688,15737620,15735578,15732708,15727054,15724992,15724799,15724409,15721634,15721051,15720312,15719713,15719308,15718438,15717348,15715272,15715081,15708841,15704123	Gene ID= ENSG00000133392.17 TPM= 5.79 Transcript Type= protein_coding
chr16	15865720	15888615	15865720	15888615	-	ENST00000255759.10@FOPNL	ENST00000255759.10	protein_coding	15888558,15884008,15879804,15873491,15865720	15888615,15884205,15879888,15873627,15867516	Gene ID= ENSG00000133393.12 TPM= 97.5 Transcript Type= protein_coding
chr16	15886907	15888593	15886907	15888593	-	transcript1657.chr16.nnic@NA	transcript1657.chr16.nnic	NA	15886907	15888593	Gene ID= novel_gene_chr16_1658 TPM= 1.93 Transcript Type= NA
chr16	15949577	16143062	15949577	16143062	+	ENST00000399410.7@ABCC1	ENST00000399410.7	protein_coding	15949577,16007816,16009776,16014491,16016496,16033109,16036472,16044450,16045836,16048142,16052724,16056092,16068156,16071642,16076326,16079352,16083366,16086824,16090405,16102627,16106738,16111375,16114766,16121975,16124789,16125810,16131789,16134350,16136478,16138364,16141173	15949799,16007992,16009901,16014628,16016621,16033170,16036603,16044680,16046013,16048303,16052816,16056295,16068302,16071729,16076401,16079478,16083542,16086991,16090588,16102717,16106873,16111582,16115076,16122174,16124915,16125911,16131935,16134508,16136644,16138558,16143062	Gene ID= ENSG00000103222.18 TPM= 28.96 Transcript Type= protein_coding
chr16	16083293	16143062	16083293	16143062	+	transcript1661.chr16.nnic@ABCC1	transcript1661.chr16.nnic	protein_coding	16083293,16086654,16090405,16098873,16102627,16106738,16111375,16114766,16121975,16124789,16125810,16131789,16134350,16136478,16138364,16141173	16083542,16086991,16090588,16098902,16102717,16106873,16111582,16115076,16122174,16124915,16125911,16131935,16134508,16136644,16138558,16143062	Gene ID= ENSG00000103222.18 TPM= 11.58 Transcript Type= NA
chr16	15949612	16018391	15949612	16018391	+	transcript1663.chr16.nic@ABCC1	transcript1663.chr16.nic	protein_coding	15949612,16007816,16009776,16014491,16016496	15949799,16007992,16009901,16014628,16018391	Gene ID= ENSG00000103222.18 TPM= 2.9 Transcript Type= NA
chr16	16143532	16145771	16143532	16145771	-	transcript1665.chr16.nnic@NA	transcript1665.chr16.nnic	NA	16143532	16145771	Gene ID= novel_gene_chr16_1666 TPM= 7.72 Transcript Type= NA
chr16	16232495	16294814	16232495	16294814	+	ENST00000399336.8@NOMO3	ENST00000399336.8	protein_coding	16232495,16236901,16239851,16243161,16245068,16247395,16250928,16251963,16252433,16255720,16256008,16261502,16263074,16263513,16265043,16267044,16270121,16270733,16273689,16273993,16275012,16275317,16277370,16278662,16280189,16281239,16283016,16285405,16287743,16293652,16294168	16232831,16236990,16239896,16243261,16245174,16247467,16251080,16252100,16252522,16255825,16256158,16261676,16263215,16263644,16265179,16267131,16270184,16270828,16273907,16274075,16275171,16275443,16277483,16278789,16280330,16281322,16283126,16285506,16287862,16293744,16294814	Gene ID= ENSG00000103226.17 TPM= 100.39 Transcript Type= protein_coding
chr16	18317942	18336736	18317942	18336736	-	ENST00000525596.5@NPIPA8	ENST00000525596.5	protein_coding	18336634,18334711,18332600,18328114,18324399,18324091,18321017,18319940,18319795,18317942	18336736,18334967,18332731,18328242,18324498,18324235,18321124,18320000,18319830,18318435	Gene ID= ENSG00000214940.8 TPM= 2.9 Transcript Type= protein_coding
chr16	18358095	18380708	18358095	18380708	-	transcript1681.chr16.nnic@AC126755.2	transcript1681.chr16.nnic	protein_coding	18380517,18379908,18379475,18379155,18377488,18377258,18376953,18376736,18374832,18372578,18368258,18364535,18364227,18361170,18360093,18359948,18358095	18380708,18380064,18379727,18379350,18377658,18377401,18377163,18376862,18375069,18372663,18368386,18364634,18364371,18361277,18360153,18359983,18358588	Gene ID= ENSG00000233024.7 TPM= 3.86 Transcript Type= NA
chr16	18358095	18380814	18358095	18380814	-	transcript1686.chr16.nnic@AC126755.2	transcript1686.chr16.nnic	protein_coding	18380517,18379908,18379475,18379155,18377488,18377258,18376953,18376736,18374832,18368258,18364535,18364227,18361170,18360093,18359948,18358095	18380814,18380064,18379727,18379350,18377658,18377401,18377163,18376862,18375069,18368386,18364634,18364371,18361277,18360153,18359983,18358588	Gene ID= ENSG00000233024.7 TPM= 18.34 Transcript Type= NA
chr16	18417325	18562211	18417325	18562211	-	ENST00000330537.10@NOMO2	ENST00000330537.10	protein_coding	18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18434654,18433348,18431807,18430815,18429010,18426630,18424274,18418392,18417325	18562211,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18434767,18433475,18431948,18430898,18429120,18426731,18424393,18418484,18417968	Gene ID= ENSG00000185164.14 TPM= 13.51 Transcript Type= protein_coding
chr16	18499925	18562112	18499925	18562112	-	ENST00000622306.4@NOMO2	ENST00000622306.4	protein_coding	18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18517189,18515883,18514342,18513350,18511546,18509166,18506873,18500991,18499925	18562112,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18517302,18516010,18514483,18513433,18511656,18509267,18506992,18501083,18500567	Gene ID= ENSG00000185164.14 TPM= 107.15 Transcript Type= protein_coding
chr16	18782968	18790362	18782968	18790362	-	ENST00000576008.5@RPS15A	ENST00000576008.5	protein_coding	18790310,18788981,18788063,18786240,18784738,18782968	18790362,18789118,18788142,18786336,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 9.97 Transcript Type= nonsense_mediated_decay
chr16	18781295	18790334	18781295	18790334	-	ENST00000322989.8@RPS15A	ENST00000322989.8	protein_coding	18790244,18788981,18788063,18784738,18781295	18790334,18789118,18788142,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 41.51 Transcript Type= protein_coding
chr16	18782956	18790383	18782956	18790383	-	ENST00000563390.5@RPS15A	ENST00000563390.5	protein_coding	18790310,18788981,18788063,18784738,18782956	18790383,18789118,18788142,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 704.03 Transcript Type= protein_coding
chr16	18782962	18790362	18782962	18790362	-	ENST00000574723.5@RPS15A	ENST00000574723.5	protein_coding	18790310,18788981,18784738,18782962	18790362,18789118,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 7.08 Transcript Type= nonsense_mediated_decay
chr16	18791667	18801678	18791667	18801678	-	ENST00000304414.11@ARL6IP1	ENST00000304414.11	protein_coding	18801431,18798701,18797925,18795464,18794599,18791667	18801678,18798834,18798044,18795581,18794683,18793370	Gene ID= ENSG00000170540.14 TPM= 25.1 Transcript Type= protein_coding
chr16	18804853	18926454	18804853	18926454	-	ENST00000446231.6@SMG1	ENST00000446231.6	protein_coding	18925950,18896793,18896052,18892218,18890863,18889372,18885541,18885090,18884070,18882165,18879495,18877131,18876124,18872494,18872184,18871364,18870801,18870610,18869854,18869104,18868523,18868190,18866621,18864002,18863650,18860667,18859556,18859022,18858170,18854656,18853583,18852318,18852067,18850237,18849949,18849217,18847816,18847453,18845429,18842208,18841565,18839698,18838551,18838357,18838014,18837253,18836360,18835933,18834892,18834204,18832940,18830219,18829926,18829286,18828031,18819502,18817291,18816302,18815440,18815175,18811948,18811761,18804853	18926454,18896956,18896207,18892354,18890921,18889585,18885666,18885162,18884167,18882338,18879719,18877232,18876393,18872624,18872345,18871482,18870888,18870711,18869994,18869303,18868719,18868354,18866775,18864144,18863851,18860776,18859703,18859181,18858290,18854904,18853867,18852462,18852205,18850467,18850126,18849378,18848033,18847607,18845651,18842454,18841794,18839946,18838689,18838466,18838232,18837443,18836532,18836212,18835164,18834438,18833166,18830369,18830115,18829755,18828168,18819654,18817470,18816529,18815651,18815281,18812127,18811867,18809646	Gene ID= ENSG00000157106.16 TPM= 24.62 Transcript Type= protein_coding
chr16	18888990	18926391	18888990	18926391	-	transcript1730.chr16.nic@SMG1	transcript1730.chr16.nic	protein_coding	18925950,18896793,18892218,18888990	18926391,18896956,18892354,18890921	Gene ID= ENSG00000157106.16 TPM= 2.41 Transcript Type= NA
chr16	19067614	19079262	19067614	19079262	+	transcript1735.chr16.nic@COQ7	transcript1735.chr16.nic	protein_coding	19067614,19071928,19073921,19075721,19077306,19078081,19078987	19067737,19072106,19074035,19075860,19077374,19078899,19079262	Gene ID= ENSG00000167186.10 TPM= 2.9 Transcript Type= NA
chr16	19067599	19080095	19067599	19080095	+	ENST00000321998.9@COQ7	ENST00000321998.9	protein_coding	19067599,19071928,19073921,19075721,19077306,19078081	19067737,19072106,19074035,19075860,19077374,19080095	Gene ID= ENSG00000167186.10 TPM= 2.9 Transcript Type= protein_coding
chr16	19078774	19081814	19078774	19081814	+	transcript1743.chr16.nnic@NA	transcript1743.chr16.nnic	NA	19078774	19081814	Gene ID= novel_gene_chr16_1744 TPM= 1.93 Transcript Type= NA
chr16	19114003	19118479	19114003	19118479	+	transcript1745.chr16.nnic@NA	transcript1745.chr16.nnic	NA	19114003	19118479	Gene ID= novel_gene_chr16_1746 TPM= 7.72 Transcript Type= NA
chr16	19501689	19522145	19501689	19522145	-	ENST00000353258.7@GDE1	ENST00000353258.7	protein_coding	19521704,19517014,19510839,19507687,19504881,19501689	19522145,19517189,19510944,19507779,19505092,19503617	Gene ID= ENSG00000006007.11 TPM= 8.69 Transcript Type= protein_coding
chr16	19502383	19522123	19502383	19522123	-	ENST00000564172.1@GDE1	ENST00000564172.1	protein_coding	19521704,19517014,19510839,19507687,19504881,19502383	19522123,19517185,19510944,19507779,19505092,19503617	Gene ID= ENSG00000006007.11 TPM= 100.39 Transcript Type= nonsense_mediated_decay
chr16	19523892	19552367	19523892	19552367	+	transcript1750.chr16.nic@CCP110	transcript1750.chr16.nic	protein_coding	19523892,19525719,19527867,19532416,19535940,19540657,19541887,19542621,19542878,19544797,19545094,19545817,19546412,19547955,19548515,19551196	19524088,19525861,19528022,19532544,19537587,19540787,19542064,19542760,19542994,19544898,19545210,19545890,19546474,19548014,19548600,19552367	Gene ID= ENSG00000103540.16 TPM= 1.93 Transcript Type= NA
chr16	19555720	19700689	19555720	19700689	+	ENST00000417362.6@C16orf62	ENST00000417362.6	protein_coding	19555720,19564851,19569424,19573119,19575098,19579052,19581525,19591790,19601664,19608178,19608974,19610322,19616114,19616686,19626177,19627694,19628637,19629767,19633092,19637594,19640015,19642396,19644886,19647784,19650382,19651976,19669160,19682225,19691353,19699502,19700378	19555746,19564950,19569591,19573241,19575122,19579128,19581653,19591874,19601723,19608274,19609021,19610415,19616191,19616808,19626223,19627805,19628753,19629820,19633172,19637656,19640100,19642476,19644949,19647882,19650459,19652090,19669299,19682390,19691471,19699648,19700689	Gene ID= ENSG00000103544.14 TPM= 55.02 Transcript Type= protein_coding
chr16	19706356	19718227	19706356	19718227	-	transcript1775.chr16.nnic@KNOP1	transcript1775.chr16.nnic	protein_coding	19718158,19717351,19714118,19711372,19710509,19706356	19718227,19717485,19715037,19711440,19710586,19707221	Gene ID= ENSG00000103550.13 TPM= 3.86 Transcript Type= NA
chr16	19714164	19718516	19714164	19718516	-	transcript1784.chr16.nic@KNOP1	transcript1784.chr16.nic	protein_coding	19718158,19714164	19718516,19715037	Gene ID= ENSG00000103550.13 TPM= 1.93 Transcript Type= NA
chr16	19716456	19858467	19716456	19858467	+	ENST00000320394.10@IQCK	ENST00000320394.10	protein_coding	19716456,19717695,19730430,19733698,19735353,19763848,19764035,19788838,19827026,19856487	19716542,19718487,19730494,19733827,19735450,19763900,19764112,19788922,19827137,19858467	Gene ID= ENSG00000174628.16 TPM= 1.93 Transcript Type= protein_coding
chr16	19718276	19857362	19718276	19857362	+	transcript1772.chr16.nnic@IQCK	transcript1772.chr16.nnic	protein_coding	19718276,19730430,19733698,19735353,19763848,19764035,19827026,19856487	19718487,19730494,19733827,19735450,19763900,19764112,19827137,19857362	Gene ID= ENSG00000174628.16 TPM= 1.93 Transcript Type= NA
chr16	19856691	19884917	19856691	19884917	-	ENST00000300571.6@GPRC5B	ENST00000300571.6	protein_coding	19884727,19871816,19861837,19856691	19884917,19872846,19861973,19860544	Gene ID= ENSG00000167191.11 TPM= 71.43 Transcript Type= protein_coding
chr16	20409534	20441336	20409534	20441336	+	ENST00000331849.8@ACSM5	ENST00000331849.8	protein_coding	20409534,20411470,20418059,20419228,20421258,20423916,20427788,20429678,20430993,20431220,20437052,20437268,20439800,20440344	20409665,20411688,20418269,20419435,20421401,20424069,20427867,20429801,20431073,20431321,20437179,20437367,20439919,20441336	Gene ID= ENSG00000183549.10 TPM= 3.86 Transcript Type= protein_coding
chr16	20735375	20741820	20735375	20741820	-	transcript1798.chr16.nnic@THUMPD1	transcript1798.chr16.nnic	protein_coding	20741509,20737708,20735375	20741820,20737956,20737286	Gene ID= ENSG00000066654.13 TPM= 3.86 Transcript Type= NA
chr16	20735375	20741796	20735375	20741796	-	ENST00000396083.6@THUMPD1	ENST00000396083.6	protein_coding	20741509,20738897,20737708,20735375	20741796,20739071,20737956,20737286	Gene ID= ENSG00000066654.13 TPM= 26.06 Transcript Type= protein_coding
chr16	20796340	20806448	20796340	20806448	-	transcript1804.chr16.nic@ERI2	transcript1804.chr16.nic	protein_coding	20805715,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796340	20806448,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20799067	Gene ID= ENSG00000196678.13 TPM= 1.93 Transcript Type= NA
chr16	20796344	20806448	20796344	20806448	-	transcript1805.chr16.nic@ERI2	transcript1805.chr16.nic	protein_coding	20805715,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344	20806448,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20798211	Gene ID= ENSG00000196678.13 TPM= 1.93 Transcript Type= NA
chr16	20900753	20925004	20900753	20925004	+	ENST00000219168.8@LYRM1	ENST00000219168.8	protein_coding	20900753,20902486,20915556,20920122,20924000	20900889,20902717,20915714,20920214,20925004	Gene ID= ENSG00000102897.9 TPM= 2.09 Transcript Type= protein_coding
chr16	20900235	20925004	20900235	20925004	+	ENST00000439021.5@LYRM1	ENST00000439021.5	protein_coding	20900235,20915556,20920122,20924000	20900535,20915714,20920214,20925004	Gene ID= ENSG00000102897.9 TPM= 12.71 Transcript Type= protein_coding
chr16	20900235	20925004	20900235	20925004	+	ENST00000412082.6@LYRM1	ENST00000412082.6	protein_coding	20900235,20920122,20924000	20900535,20920214,20925004	Gene ID= ENSG00000102897.9 TPM= 3.54 Transcript Type= protein_coding
chr16	21158679	21180616	21158679	21180616	+	transcript1821.chr16.nic@TMEM159	transcript1821.chr16.nic	protein_coding	21158679,21160978,21166840,21170437,21174010,21179475	21158746,21161278,21166911,21170605,21174148,21180616	Gene ID= ENSG00000011638.10 TPM= 3.54 Transcript Type= NA
chr16	21158377	21180616	21158377	21180616	+	ENST00000233047.8@TMEM159	ENST00000233047.8	protein_coding	21158377,21161085,21170437,21174010,21179475	21158746,21161278,21170605,21174148,21180616	Gene ID= ENSG00000011638.10 TPM= 25.74 Transcript Type= protein_coding
chr16	21158679	21180609	21158679	21180609	+	ENST00000261388.7@TMEM159	ENST00000261388.7	protein_coding	21158679,21160978,21170437,21174010,21179475	21158746,21161278,21170605,21174148,21180609	Gene ID= ENSG00000011638.10 TPM= 14.16 Transcript Type= protein_coding
chr16	21500020	21520504	21500020	21520504	-	transcript1843.chr16.nnic@SMG1P3	transcript1843.chr16.nnic	transcribed_unprocessed_pseudogene	21519828,21504007,21500020	21520504,21504128,21502321	Gene ID= ENSG00000180747.15 TPM= 4.83 Transcript Type= NA
chr16	21506646	21520454	21506646	21520454	-	transcript1848.chr16.nnic@SMG1P3	transcript1848.chr16.nnic	transcribed_unprocessed_pseudogene	21519828,21506646	21520454,21507124	Gene ID= ENSG00000180747.15 TPM= 1.93 Transcript Type= NA
chr16	21508857	21511304	21508857	21511304	+	transcript1849.chr16.nnic@NA	transcript1849.chr16.nnic	NA	21508857	21511304	Gene ID= novel_gene_chr16_1850 TPM= 2.9 Transcript Type= NA
chr16	21599476	21657473	21599476	21657473	+	ENST00000358154.7@METTL9	ENST00000358154.7	protein_coding	21599476,21612645,21617865,21624931,21655227	21599898,21612835,21618074,21625115,21657473	Gene ID= ENSG00000197006.13 TPM= 96.05 Transcript Type= protein_coding
chr16	21599590	21657473	21599590	21657473	+	transcript1860.chr16.nic@METTL9	transcript1860.chr16.nic	protein_coding	21599590,21617865,21624931,21655227	21599898,21618074,21625115,21657473	Gene ID= ENSG00000197006.13 TPM= 4.34 Transcript Type= NA
chr16	21599558	21656119	21599558	21656119	+	ENST00000396014.8@METTL9	ENST00000396014.8	protein_coding	21599558,21612645,21617865,21624931,21655230	21599898,21612835,21618074,21625115,21656119	Gene ID= ENSG00000197006.13 TPM= 7.72 Transcript Type= protein_coding
chr16	21952660	21983660	21952660	21983660	+	ENST00000268379.8@UQCRC2	ENST00000268379.8	protein_coding	21952660,21957235,21957417,21958535,21962460,21962761,21965408,21968628,21971525,21971923,21973896,21976167,21980547,21983088	21953456,21957318,21957566,21958599,21962516,21962885,21965505,21968685,21971620,21972122,21973976,21976243,21980700,21983660	Gene ID= ENSG00000140740.10 TPM= 259.19 Transcript Type= protein_coding
chr16	22006820	22008024	22006820	22008024	-	transcript1883.chr16.nnic@NA	transcript1883.chr16.nnic	NA	22006820	22008024	Gene ID= novel_gene_chr16_1884 TPM= 1.93 Transcript Type= NA
chr16	22206278	22286629	22206278	22286629	+	transcript1893.chr16.nnic@EEF2K	transcript1893.chr16.nnic	protein_coding	22206278,22225654,22244630,22248755,22250654,22251151,22256748,22257253,22257643,22258494,22260462,22263110,22264818,22266390,22266688,22273626,22280198,22283887,22285905	22206679,22225975,22244730,22248815,22250691,22251322,22256897,22257385,22257770,22258695,22260529,22263187,22264880,22266524,22266876,22273750,22280376,22285610,22286629	Gene ID= ENSG00000103319.11 TPM= 4.83 Transcript Type= NA
chr16	22206282	22288732	22206282	22288732	+	ENST00000263026.9@EEF2K	ENST00000263026.9	protein_coding	22206282,22225654,22244630,22248755,22250654,22251151,22256748,22257253,22257643,22258494,22260462,22263110,22264818,22266390,22266688,22273626,22280198,22283887	22206679,22225975,22244730,22248815,22250691,22251322,22256897,22257385,22257770,22258695,22260529,22263187,22264880,22266524,22266876,22273750,22280376,22288732	Gene ID= ENSG00000103319.11 TPM= 6.76 Transcript Type= protein_coding
chr16	22206278	22264317	22206278	22264317	+	transcript1902.chr16.nic@EEF2K	transcript1902.chr16.nic	protein_coding	22206278,22225654,22244630,22248755,22250654,22251151,22256748,22257253,22257643,22258494,22260462,22263110	22206679,22225975,22244730,22248815,22250691,22251322,22256897,22257385,22257770,22258695,22260529,22264317	Gene ID= ENSG00000103319.11 TPM= 1.93 Transcript Type= NA
chr16	22297401	22334204	22297401	22334204	+	transcript1913.chr16.nnic@POLR3E	transcript1913.chr16.nnic	protein_coding	22297401,22302958,22305156,22308148,22308925,22309428,22313620,22314079,22315089,22316601,22316995,22317115,22318826,22322850,22324354,22324503,22325205,22325761,22328510,22332060,22333644	22297425,22303004,22305206,22308225,22309040,22309510,22313727,22314128,22315208,22316686,22317039,22317206,22318946,22322931,22324413,22324660,22325266,22326278,22328587,22332185,22334204	Gene ID= ENSG00000058600.15 TPM= 8.69 Transcript Type= NA
chr16	22297409	22335103	22297409	22335103	+	ENST00000299853.9@POLR3E	ENST00000299853.9	protein_coding	22297409,22302931,22305156,22308148,22308925,22309428,22313620,22314079,22315089,22316601,22316995,22317115,22318826,22322850,22324354,22324503,22325205,22325761,22328510,22332060,22333644	22297537,22303004,22305206,22308225,22309040,22309510,22313727,22314128,22315208,22316686,22317039,22317206,22318946,22322931,22324413,22324660,22325266,22326278,22328587,22332185,22335103	Gene ID= ENSG00000058600.15 TPM= 2.41 Transcript Type= protein_coding
chr16	22297375	22335101	22297375	22335101	+	ENST00000615879.4@POLR3E	ENST00000615879.4	protein_coding	22297375,22305156,22308148,22308925,22309428,22313620,22314079,22315089,22316601,22316995,22317115,22318826,22322850,22324354,22324503,22325205,22325761,22328510,22332060,22333644	22297537,22305206,22308225,22309040,22309510,22313727,22314128,22315208,22316686,22317039,22317206,22318946,22322931,22324413,22324660,22325266,22326278,22328587,22332185,22335101	Gene ID= ENSG00000058600.15 TPM= 2.41 Transcript Type= protein_coding
chr16	22345936	22437701	22345936	22437701	-	transcript1929.chr16.nic@CDR2	transcript1929.chr16.nic	protein_coding	22437005,22435682,22434627,22432726,22429796,22364902,22349701,22349279,22345936	22437701,22435812,22434811,22432834,22429948,22365014,22349849,22349443,22347823	Gene ID= ENSG00000140743.7 TPM= 1.93 Transcript Type= NA
chr16	22345936	22374617	22345936	22374617	-	ENST00000268383.6@CDR2	ENST00000268383.6	protein_coding	22374231,22364902,22349701,22349279,22345936	22374617,22365014,22349849,22349443,22347823	Gene ID= ENSG00000140743.7 TPM= 4.83 Transcript Type= protein_coding
chr16	23078979	23149457	23078979	23149457	-	transcript1937.chr16.nnic@USP31	transcript1937.chr16.nnic	protein_coding	23148638,23108046,23107331,23106399,23106213,23105441,23102319,23090624,23087724,23087092,23085585,23084860,23082438,23078979	23149457,23108183,23107414,23106487,23106305,23105576,23102463,23090804,23087835,23087186,23085662,23084989,23082557,23080171	Gene ID= ENSG00000103404.14 TPM= 3.86 Transcript Type= NA
chr16	23078979	23149457	23078979	23149457	-	transcript1939.chr16.nic@USP31	transcript1939.chr16.nic	protein_coding	23148638,23108046,23106399,23106213,23105441,23102319,23090624,23087724,23087092,23085585,23084860,23082438,23078979	23149457,23108183,23106487,23106305,23105576,23102463,23090804,23087835,23087186,23085662,23084989,23082557,23080171	Gene ID= ENSG00000103404.14 TPM= 1.93 Transcript Type= NA
chr16	23079757	23149457	23079757	23149457	-	transcript1945.chr16.nnic@USP31	transcript1945.chr16.nnic	protein_coding	23148638,23108046,23106399,23106213,23105441,23102319,23090624,23087724,23087092,23085585,23084860,23079757	23149457,23108183,23106487,23106305,23105576,23102463,23090804,23087835,23087186,23085662,23084989,23080171	Gene ID= ENSG00000103404.14 TPM= 2.9 Transcript Type= NA
chr16	23065701	23069328	23065701	23069328	-	transcript1949.chr16.nnic@NA	transcript1949.chr16.nnic	NA	23065701	23069328	Gene ID= novel_gene_chr16_1950 TPM= 7.72 Transcript Type= NA
chr16	23388493	23453180	23388493	23453180	-	ENST00000307149.9@COG7	ENST00000307149.9	protein_coding	23452826,23445813,23445048,23442477,23434636,23433545,23424749,23418700,23416967,23413448,23410295,23406076,23403694,23398046,23393233,23392380,23388493	23453180,23445961,23445164,23442645,23434718,23433667,23424947,23418827,23417121,23413564,23410360,23406262,23403834,23398129,23393347,23392523,23389086	Gene ID= ENSG00000168434.12 TPM= 5.79 Transcript Type= protein_coding
chr16	23466160	23510496	23466160	23510496	-	transcript1958.chr16.nnic@GGA2	transcript1958.chr16.nnic	protein_coding	23510321,23495694,23494303,23493360,23491677,23488606,23486710,23486015,23482923,23480645,23479765,23478883,23478368,23474904,23469996,23468886,23467467,23466160	23510496,23495778,23494378,23493458,23491800,23488709,23486790,23486152,23483004,23480770,23479887,23478911,23478501,23475061,23470165,23468996,23467700,23466778	Gene ID= ENSG00000103365.15 TPM= 2.9 Transcript Type= NA
chr16	23463542	23510494	23463542	23510494	-	ENST00000309859.8@GGA2	ENST00000309859.8	protein_coding	23510321,23495694,23494303,23493360,23491677,23488606,23486710,23486015,23482923,23480645,23479765,23478883,23478368,23474904,23469996,23468886,23463542	23510494,23495778,23494378,23493458,23491800,23488709,23486790,23486152,23483004,23480770,23479887,23478911,23478501,23475061,23470165,23468996,23467700	Gene ID= ENSG00000103365.15 TPM= 2.9 Transcript Type= protein_coding
chr16	23522014	23557375	23522014	23557375	-	ENST00000449606.5@EARS2	ENST00000449606.5	protein_coding	23557205,23552149,23544514,23534888,23532657,23529744,23529502,23525244,23522014	23557375,23552304,23544703,23535360,23532765,23529897,23529632,23525379,23524454	Gene ID= ENSG00000103356.15 TPM= 6.76 Transcript Type= protein_coding
chr16	23557705	23570858	23557705	23570858	+	transcript1981.chr16.nnic@UBFD1	transcript1981.chr16.nnic	protein_coding	23557705,23557950,23559468,23562206,23562625,23564039,23564550,23566987,23570480	23557767,23558279,23559676,23562271,23562730,23564089,23564732,23567069,23570858	Gene ID= ENSG00000103353.15 TPM= 4.83 Transcript Type= NA
chr16	23557683	23574387	23557683	23574387	+	transcript1993.chr16.nnic@UBFD1	transcript1993.chr16.nnic	protein_coding	23557683,23557950,23559468,23562206,23562625,23564039,23566987,23570480	23557767,23558279,23559676,23562271,23562730,23564089,23567069,23574387	Gene ID= ENSG00000103353.15 TPM= 11.42 Transcript Type= NA
chr16	23557362	23574389	23557362	23574389	+	ENST00000395878.7@UBFD1	ENST00000395878.7	protein_coding	23557362,23557950,23559468,23562206,23562625,23566987,23570480	23557767,23558279,23559676,23562271,23562730,23567069,23574389	Gene ID= ENSG00000103353.15 TPM= 44.24 Transcript Type= protein_coding
chr16	23557712	23574389	23557712	23574389	+	transcript2012.chr16.nnic@UBFD1	transcript2012.chr16.nnic	protein_coding	23557712,23557950,23559468,23562206,23562625,23570480	23557767,23558279,23559676,23562271,23562730,23574389	Gene ID= ENSG00000103353.15 TPM= 11.1 Transcript Type= NA
chr16	23563080	23563631	23563080	23563631	-	transcript2021.chr16.nnic@NA	transcript2021.chr16.nnic	NA	23563080	23563631	Gene ID= novel_gene_chr16_2022 TPM= 1.93 Transcript Type= NA
chr16	23581002	23596356	23581002	23596356	-	ENST00000007516.7@NDUFAB1	ENST00000007516.7	protein_coding	23596123,23587197,23585336,23582276,23581002	23596356,23587319,23585423,23582375,23581173	Gene ID= ENSG00000004779.9 TPM= 218.16 Transcript Type= protein_coding
chr16	23581033	23596303	23581033	23596303	-	ENST00000484769.1@NDUFAB1	ENST00000484769.1	protein_coding	23596123,23595429,23587197,23585336,23582276,23581033	23596303,23595638,23587319,23585423,23582375,23581173	Gene ID= ENSG00000004779.9 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr16	23603170	23641310	23603170	23641310	-	ENST00000261584.8@PALB2	ENST00000261584.8	protein_coding	23641110,23638070,23637850,23634862,23629640,23629204,23626236,23624009,23622969,23621362,23614004,23607864,23603170	23641310,23638129,23637952,23636334,23630469,23629275,23626397,23624094,23623130,23621478,23614091,23608012,23603669	Gene ID= ENSG00000083093.9 TPM= 6.76 Transcript Type= protein_coding
chr16	23641438	23669860	23641438	23669860	+	transcript2026.chr16.nnic@DCTN5	transcript2026.chr16.nnic	protein_coding	23641438,23642955,23658507,23661170,23665626,23667047,23669443	23641590,23643023,23658625,23661281,23665728,23667573,23669860	Gene ID= ENSG00000166847.9 TPM= 5.79 Transcript Type= NA
chr16	23641392	23677455	23641392	23677455	+	ENST00000300087.6@DCTN5	ENST00000300087.6	protein_coding	23641392,23642955,23658507,23661170,23665626,23667047	23641590,23643023,23658625,23661281,23665728,23677455	Gene ID= ENSG00000166847.9 TPM= 1.93 Transcript Type= protein_coding
chr16	24539533	24540586	24539533	24540586	+	transcript2037.chr16.nnic@NA	transcript2037.chr16.nnic	NA	24539533	24540586	Gene ID= novel_gene_chr16_2038 TPM= 17.38 Transcript Type= NA
chr16	24729662	24750777	24729662	24750777	+	transcript2044.chr16.nic@TNRC6A	transcript2044.chr16.nic	protein_coding	24729662,24730253,24750726	24729846,24730300,24750777	Gene ID= ENSG00000090905.18 TPM= 9.65 Transcript Type= NA
chr16	24919385	25015331	24919385	25015331	-	ENST00000289968.10@ARHGAP17	ENST00000289968.10	protein_coding	25015209,24978966,24977215,24970507,24968661,24968351,24964197,24959911,24959671,24954603,24952931,24952289,24949404,24947482,24943771,24941987,24939364,24935470,24930784,24919385	25015331,24979005,24977319,24970580,24968772,24968427,24964308,24959979,24959752,24954730,24953042,24952370,24949484,24947595,24943862,24942143,24939597,24935639,24931404,24920260	Gene ID= ENSG00000140750.16 TPM= 4.83 Transcript Type= protein_coding
chr16	24919395	24931160	24919395	24931160	-	ENST00000571843.1@ARHGAP17	ENST00000571843.1	protein_coding	24930784,24927684,24919395	24931160,24927732,24920260	Gene ID= ENSG00000140750.16 TPM= 1.93 Transcript Type= protein_coding
chr16	24976147	24978883	24976147	24978883	+	transcript2052.chr16.nnic@NA	transcript2052.chr16.nnic	NA	24976147	24978883	Gene ID= novel_gene_chr16_2053 TPM= 7.72 Transcript Type= NA
chr16	25106569	25107102	25106569	25107102	-	ENST00000613406.1@AC133552.6	ENST00000613406.1	sense_intronic	25106569	25107102	Gene ID= ENSG00000275494.1 TPM= 23.17 Transcript Type= sense_intronic
chr16	25111731	25178231	25111731	25178231	+	ENST00000380962.9@LCMT1	ENST00000380962.9	protein_coding	25111731,25125964,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001	25111996,25126126,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178231	Gene ID= ENSG00000205629.11 TPM= 1.61 Transcript Type= nonsense_mediated_decay
chr16	25111705	25178228	25111705	25178228	+	transcript2057.chr16.nic@LCMT1	transcript2057.chr16.nic	protein_coding	25111705,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001	25111768,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178228	Gene ID= ENSG00000205629.11 TPM= 12.23 Transcript Type= NA
chr16	25111729	25178231	25111729	25178231	+	ENST00000399069.7@LCMT1	ENST00000399069.7	protein_coding	25111729,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001	25111996,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178231	Gene ID= ENSG00000205629.11 TPM= 55.67 Transcript Type= protein_coding
chr16	25111735	25178198	25111735	25178198	+	ENST00000564011.5@LCMT1	ENST00000564011.5	protein_coding	25111735,25128475,25132402,25140171,25164598,25169112,25170714,25174937,25178001	25111996,25128570,25132523,25140247,25164718,25169213,25170805,25175034,25178198	Gene ID= ENSG00000205629.11 TPM= 9.65 Transcript Type= nonsense_mediated_decay
chr16	27224991	27268794	27224991	27268794	-	ENST00000361439.8@NSMCE1	ENST00000361439.8	protein_coding	27268706,27257435,27235178,27234188,27233001,27226720,27225726,27224991	27268794,27257581,27235299,27234265,27233147,27226836,27225846,27225236	Gene ID= ENSG00000169189.16 TPM= 12.55 Transcript Type= protein_coding
chr16	27460678	27549960	27460678	27549960	-	transcript2078.chr16.nnic@GTF3C1	transcript2078.chr16.nnic	protein_coding	27549670,27545314,27538180,27537784,27533291,27528598,27511749,27508540,27506847,27505899,27502859,27501191,27498630,27497637,27495211,27494763,27493199,27492617,27492338,27489626,27489043,27488554,27488227,27485997,27484211,27483044,27481079,27478469,27476451,27471748,27470108,27469291,27465260,27464320,27463541,27462294,27460678	27549960,27545523,27538356,27537927,27533387,27528721,27511901,27508655,27507156,27506116,27502995,27501344,27498733,27497821,27495492,27494908,27493296,27492713,27492515,27489743,27489178,27488635,27488415,27486154,27484353,27483125,27481191,27478531,27476544,27471920,27470395,27469550,27465540,27464836,27463592,27462486,27461562	Gene ID= ENSG00000077235.17 TPM= 4.1 Transcript Type= NA
chr16	27460613	27549913	27460613	27549913	-	ENST00000561623.5@GTF3C1	ENST00000561623.5	protein_coding	27549670,27545314,27538180,27537784,27533291,27528598,27511749,27508540,27506847,27505899,27502859,27501191,27498630,27497637,27495211,27494763,27493199,27492617,27492338,27489602,27489043,27488554,27488227,27485997,27484211,27483044,27481079,27478469,27476451,27471748,27470108,27469291,27465260,27464395,27463541,27462294,27460613	27549913,27545523,27538356,27537927,27533387,27528721,27511901,27508655,27507156,27506116,27502995,27501344,27498733,27497821,27495492,27494908,27493296,27492713,27492515,27489743,27489178,27488635,27488415,27486154,27484353,27483125,27481191,27478531,27476544,27471920,27470395,27469550,27465540,27464836,27463592,27462486,27461562	Gene ID= ENSG00000077235.17 TPM= 30.17 Transcript Type= protein_coding
chr16	27460678	27549906	27460678	27549906	-	ENST00000356183.8@GTF3C1	ENST00000356183.8	protein_coding	27549670,27545314,27538180,27537784,27533291,27528598,27511749,27508540,27506847,27505899,27502859,27501191,27498630,27497637,27495211,27494763,27493199,27492617,27492338,27489602,27489043,27488554,27488227,27485997,27484211,27483044,27481079,27478469,27476451,27471748,27470108,27469291,27465260,27464320,27463541,27462294,27460678	27549906,27545523,27538356,27537927,27533387,27528721,27511901,27508655,27507156,27506116,27502995,27501344,27498733,27497821,27495492,27494908,27493296,27492713,27492515,27489743,27489178,27488635,27488415,27486154,27484353,27483125,27481191,27478531,27476544,27471920,27470395,27469550,27465540,27464836,27463592,27462486,27461562	Gene ID= ENSG00000077235.17 TPM= 25.34 Transcript Type= protein_coding
chr16	27544976	27547414	27544976	27547414	-	transcript2087.chr16.nnic@NA	transcript2087.chr16.nnic	NA	27544976	27547414	Gene ID= novel_gene_chr16_2088 TPM= 1.93 Transcript Type= NA
chr16	27550152	27780369	27550152	27780369	+	ENST00000261588.8@KIAA0556	ENST00000261588.8	protein_coding	27550152,27573901,27618425,27628661,27631065,27648604,27677729,27681399,27698328,27699534,27701589,27703896,27708705,27721558,27740041,27749584,27751719,27754173,27761413,27766309,27769861,27771588,27773099,27774945,27776928,27777610,27777881,27778574	27550177,27573956,27618501,27628830,27631162,27648735,27677996,27681530,27698500,27699599,27701695,27703998,27708920,27721695,27740920,27750306,27751924,27754251,27761590,27766474,27770018,27771652,27773209,27775084,27777029,27777770,27777969,27780369	Gene ID= ENSG00000047578.12 TPM= 5.79 Transcript Type= protein_coding
chr16	28258702	28323336	28258702	28323336	+	transcript2098.chr16.nnic@SBK1	transcript2098.chr16.nnic	protein_coding	28258702,28317385,28318995,28320076	28259502,28317617,28319197,28323336	Gene ID= ENSG00000188322.4 TPM= 6.76 Transcript Type= NA
chr16	28376681	28378094	28376681	28378094	-	transcript2099.chr16.nnic@NA	transcript2099.chr16.nnic	NA	28376681	28378094	Gene ID= novel_gene_chr16_2100 TPM= 1.93 Transcript Type= NA
chr16	28477272	28492074	28477272	28492074	-	ENST00000359984.12@CLN3	ENST00000359984.12	protein_coding	28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477272	28492074,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635	Gene ID= ENSG00000188603.18 TPM= 14.48 Transcript Type= protein_coding
chr16	28477294	28495550	28477294	28495550	-	ENST00000569430.6@CLN3	ENST00000569430.6	protein_coding	28493495,28492020,28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477294	28495550,28492215,28491835,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635	Gene ID= ENSG00000188603.18 TPM= 4.83 Transcript Type= protein_coding
chr16	28537366	28538974	28537366	28538974	-	transcript2119.chr16.nnic@NUPR1	transcript2119.chr16.nnic	protein_coding	28538796,28538526,28538006,28537366	28538974,28538674,28538155,28537669	Gene ID= ENSG00000176046.8 TPM= 14.48 Transcript Type= NA
chr16	28537366	28539021	28537366	28539021	-	transcript2122.chr16.nic@NUPR1	transcript2122.chr16.nic	protein_coding	28538526,28538006,28537366	28539021,28538155,28537669	Gene ID= ENSG00000176046.8 TPM= 21.24 Transcript Type= NA
chr16	28532708	28539174	28532708	28539174	-	ENST00000324873.7@NUPR1	ENST00000324873.7	protein_coding	28538796,28538006,28532708	28539174,28538155,28537669	Gene ID= ENSG00000176046.8 TPM= 191.13 Transcript Type= protein_coding
chr16	28537366	28539016	28537366	28539016	-	transcript2126.chr16.nic@NUPR1	transcript2126.chr16.nic	protein_coding	28538006,28537366	28539016,28537669	Gene ID= ENSG00000176046.8 TPM= 17.38 Transcript Type= NA
chr16	28553889	28591788	28553889	28591788	+	transcript2110.chr16.nic@SGF29	transcript2110.chr16.nic	protein_coding	28553889,28581055,28584913,28585648,28589100,28590096,28590296,28590631,28590773	28554097,28581144,28584988,28585720,28589164,28590225,28590442,28590666,28591788	Gene ID= ENSG00000176476.8 TPM= 2.9 Transcript Type= NA
chr16	28553926	28591790	28553926	28591790	+	ENST00000317058.7@SGF29	ENST00000317058.7	protein_coding	28553926,28581055,28584913,28585648,28589100,28590096,28590296,28590631,28590773,28591590	28554097,28581144,28584988,28585720,28589164,28590225,28590442,28590666,28590935,28591790	Gene ID= ENSG00000176476.8 TPM= 64.68 Transcript Type= protein_coding
chr16	28605592	28623553	28605592	28623553	-	ENST00000562058.5@SULT1A1	ENST00000562058.5	protein_coding	28623131,28620063,28609931,28608708,28608478,28608291,28606951,28606761,28606056,28605592	28623553,28620133,28610191,28608859,28608603,28608388,28607077,28606855,28606236,28605933	Gene ID= ENSG00000196502.11 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr16	28607608	28610004	28607608	28610004	-	transcript2137.chr16.nnic@NA	transcript2137.chr16.nnic	NA	28607608	28610004	Gene ID= novel_gene_chr16_2138 TPM= 1.93 Transcript Type= NA
chr16	28711363	28735730	28711363	28735730	+	ENST00000331666.10@EIF3C	ENST00000331666.10	protein_coding	28711363,28711657,28713701,28713909,28714321,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28711518,28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735730	Gene ID= ENSG00000184110.14 TPM= 78.51 Transcript Type= protein_coding
chr16	28711474	28735596	28711474	28735596	+	ENST00000564243.5@EIF3C	ENST00000564243.5	protein_coding	28711474,28711657,28713701,28713909,28714351,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28711518,28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735596	Gene ID= ENSG00000184110.14 TPM= 565.51 Transcript Type= protein_coding
chr16	28711527	28735597	28711527	28735597	+	ENST00000566866.5@EIF3C	ENST00000566866.5	protein_coding	28711527,28713701,28713909,28714321,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735597	Gene ID= ENSG00000184110.14 TPM= 46.17 Transcript Type= protein_coding
chr16	28822431	28823969	28822431	28823969	-	ENST00000614819.1@AC145285.7	ENST00000614819.1	antisense_RNA	28822431	28823969	Gene ID= ENSG00000275807.1 TPM= 2.9 Transcript Type= antisense_RNA
chr16	28822999	28825068	28822999	28825068	+	transcript2150.chr16.nnic@NA	transcript2150.chr16.nnic	NA	28822999	28825068	Gene ID= novel_gene_chr16_2151 TPM= 5.79 Transcript Type= NA
chr16	28823093	28837237	28823093	28837237	+	ENST00000382686.8@ATXN2L	ENST00000382686.8	protein_coding	28823093,28825366,28825624,28825770,28826240,28826862,28829401,28829858,28830615,28830962,28832205,28832496,28832817,28833059,28833439,28834065,28834343,28834506,28835058,28835278,28835549,28835933,28836751	28823558,28825402,28825680,28825841,28826390,28826986,28829492,28830058,28830790,28831072,28832399,28832567,28832887,28833354,28833508,28834211,28834415,28834693,28835187,28835399,28835758,28836122,28837237	Gene ID= ENSG00000168488.18 TPM= 9.17 Transcript Type= protein_coding
chr16	28823093	28837232	28823093	28837232	+	ENST00000325215.10@ATXN2L	ENST00000325215.10	protein_coding	28823093,28825366,28825624,28825770,28826240,28826862,28829401,28829858,28830615,28830962,28832205,28832496,28832817,28833059,28833439,28834065,28834343,28834506,28835058,28835278,28835549,28835933,28836751	28823558,28825402,28825680,28825841,28826390,28826986,28829492,28830058,28830790,28831072,28832399,28832567,28832887,28833354,28833508,28834211,28834415,28834693,28835187,28835399,28835758,28836176,28837232	Gene ID= ENSG00000168488.18 TPM= 9.17 Transcript Type= protein_coding
chr16	28863791	28874205	28863791	28874205	+	transcript2296.chr16.nic@SH2B1	transcript2296.chr16.nic	protein_coding	28863791,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447	28863945,28867033,28867432,28869097,28869383,28871983,28872401,28872705,28873269,28874205	Gene ID= ENSG00000178188.14 TPM= 19.31 Transcript Type= NA
chr16	28863805	28874205	28863805	28874205	+	ENST00000359285.9@SH2B1	ENST00000359285.9	protein_coding	28863805,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447	28863945,28867033,28867432,28869097,28869383,28871983,28872401,28872758,28873269,28874205	Gene ID= ENSG00000178188.14 TPM= 11.58 Transcript Type= protein_coding
chr16	28878405	28904464	28878405	28904464	+	ENST00000357084.7@ATP2A1	ENST00000357084.7	protein_coding	28878405,28879099,28879501,28880915,28882451,28884575,28887189,28887425,28888787,28894155,28894505,28894822,28898000,28898233,28900581,28901863,28902184,28902580,28902778,28903030,28903323,28904180	28878789,28879116,28879583,28881019,28882589,28884655,28887274,28887722,28888953,28894243,28894607,28894953,28898125,28898451,28900916,28902083,28902386,28902665,28902911,28903147,28903440,28904464	Gene ID= ENSG00000196296.13 TPM= 50.5 Transcript Type= protein_coding
chr16	28878488	28904509	28878488	28904509	+	ENST00000395503.8@ATP2A1	ENST00000395503.8	protein_coding	28878488,28879099,28879501,28880915,28882451,28884575,28887189,28887425,28888787,28894155,28894505,28894822,28898000,28898233,28900581,28901863,28902184,28902580,28902778,28903030,28903323,28903700,28904180	28878789,28879116,28879583,28881019,28882589,28884655,28887274,28887722,28888953,28894243,28894607,28894953,28898125,28898451,28900916,28902083,28902386,28902665,28902911,28903147,28903440,28903741,28904509	Gene ID= ENSG00000196296.13 TPM= 4087.71 Transcript Type= protein_coding
chr16	28880053	28904464	28880053	28904464	+	ENST00000536376.5@ATP2A1	ENST00000536376.5	protein_coding	28880053,28880915,28882451,28884575,28887189,28887425,28888787,28894155,28894505,28894822,28898000,28898233,28900581,28901863,28902184,28902580,28902778,28903030,28903323,28903700,28904180	28880094,28881019,28882589,28884655,28887274,28887722,28888953,28894243,28894607,28894953,28898125,28898451,28900916,28902083,28902386,28902665,28902911,28903147,28903440,28903741,28904464	Gene ID= ENSG00000196296.13 TPM= 318.99 Transcript Type= protein_coding
chr16	28878957	28879936	28878957	28879936	-	transcript2318.chr16.nnic@ATP2A1-AS1	transcript2318.chr16.nnic	antisense_RNA	28879867,28879489,28878957	28879936,28879755,28879107	Gene ID= ENSG00000260442.5 TPM= 1.93 Transcript Type= NA
chr16	28878957	28879936	28878957	28879936	-	transcript2320.chr16.nnic@ATP2A1-AS1	transcript2320.chr16.nnic	antisense_RNA	28879867,28879542,28878957	28879936,28879755,28879107	Gene ID= ENSG00000260442.5 TPM= 4.83 Transcript Type= NA
chr16	28878957	28879920	28878957	28879920	-	ENST00000566956.1@ATP2A1-AS1	ENST00000566956.1	antisense_RNA	28879542,28878957	28879920,28879107	Gene ID= ENSG00000260442.5 TPM= 26.06 Transcript Type= antisense_RNA
chr16	28878957	28879895	28878957	28879895	-	ENST00000561547.5@ATP2A1-AS1	ENST00000561547.5	antisense_RNA	28879489,28878957	28879895,28879107	Gene ID= ENSG00000260442.5 TPM= 15.44 Transcript Type= antisense_RNA
chr16	28974772	28984548	28974772	28984548	+	ENST00000565975.5@SPNS1	ENST00000565975.5	protein_coding	28974772,28975101,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28974863,28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984548	Gene ID= ENSG00000169682.17 TPM= 11.27 Transcript Type= protein_coding
chr16	28974775	28984543	28974775	28984543	+	ENST00000311008.15@SPNS1	ENST00000311008.15	protein_coding	28974775,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984543	Gene ID= ENSG00000169682.17 TPM= 37.33 Transcript Type= protein_coding
chr16	28974794	28984543	28974794	28984543	+	ENST00000323081.12@SPNS1	ENST00000323081.12	protein_coding	28974794,28975188,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28975100,28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984543	Gene ID= ENSG00000169682.17 TPM= 9.33 Transcript Type= protein_coding
chr16	29443249	29454358	29443249	29454358	-	transcript2373.chr16.nic@BOLA2-SMG1P6	transcript2373.chr16.nic	protein_coding	29454016,29446802,29444398,29443249	29454358,29447026,29444499,29443688	Gene ID= ENSG00000261740.6 TPM= 4.83 Transcript Type= NA
chr16	29443249	29454352	29443249	29454352	-	transcript2374.chr16.nnic@BOLA2-SMG1P6	transcript2374.chr16.nnic	protein_coding	29454191,29454016,29444398,29443249	29454352,29454113,29444499,29443688	Gene ID= ENSG00000261740.6 TPM= 1.93 Transcript Type= NA
chr16	29443230	29454347	29443230	29454347	-	ENST00000569622.5@BOLA2-SMG1P6	ENST00000569622.5	protein_coding	29454191,29454016,29446802,29444398,29443230	29454347,29454113,29446922,29444499,29443688	Gene ID= ENSG00000261740.6 TPM= 10.62 Transcript Type= protein_coding
chr16	29454501	29458219	29454501	29458219	+	ENST00000330181.9@SLX1B	ENST00000330181.9	protein_coding	29454501,29455398,29455544,29457632,29457928,29458095	29454930,29455449,29455885,29457759,29458015,29458219	Gene ID= ENSG00000181625.17 TPM= 39.58 Transcript Type= protein_coding
chr16	29454562	29458219	29454562	29458219	+	ENST00000351581.4@SLX1B	ENST00000351581.4	protein_coding	29454562,29455398,29457632,29457928,29458095	29454930,29455449,29457759,29458015,29458219	Gene ID= ENSG00000181625.17 TPM= 3.86 Transcript Type= protein_coding
chr16	29460432	29464663	29460432	29464663	+	transcript2360.chr16.nic@SLX1B-SULT1A4	transcript2360.chr16.nic	processed_transcript	29460432,29461638,29461853,29463345,29463567,29464160,29464463	29461533,29461763,29461950,29463471,29463661,29464340,29464663	Gene ID= ENSG00000260280.5 TPM= 6.27 Transcript Type= NA
chr16	29459889	29464976	29459889	29464976	+	ENST00000360423.11@SULT1A4	ENST00000360423.11	protein_coding	29459889,29461382,29461638,29461853,29463345,29463567,29464160,29464463	29459985,29461533,29461763,29461950,29463471,29463661,29464340,29464976	Gene ID= ENSG00000213648.10 TPM= 10.14 Transcript Type= protein_coding
chr16	29545011	29595381	29545011	29595381	-	transcript2347.chr16.nnic@SMG1P2	transcript2347.chr16.nnic	unprocessed_pseudogene	29594887,29569612,29569271,29566086,29565351,29561515,29560157,29558665,29554867,29554416,29553086,29551189,29548538,29546166,29545011	29595381,29569751,29569328,29566249,29565506,29561651,29560215,29558878,29554992,29554488,29553183,29551361,29548762,29546267,29545450	Gene ID= ENSG00000205534.6 TPM= 3.06 Transcript Type= NA
chr16	29545011	29595130	29545011	29595130	-	transcript2348.chr16.nnic@SMG1P2	transcript2348.chr16.nnic	unprocessed_pseudogene	29594887,29566086,29565351,29562702,29561515,29560157,29558665,29554867,29554416,29553086,29551189,29548538,29546166,29545011	29595130,29566249,29565506,29562786,29561651,29560215,29558878,29554992,29554488,29553183,29551361,29548762,29546267,29545450	Gene ID= ENSG00000205534.6 TPM= 2.09 Transcript Type= NA
chr16	29545011	29595367	29545011	29595367	-	transcript2349.chr16.nnic@SMG1P2	transcript2349.chr16.nnic	unprocessed_pseudogene	29594887,29569271,29566086,29565351,29561515,29560157,29558665,29554867,29554416,29553086,29551189,29548538,29546166,29545011	29595367,29569328,29566249,29565506,29561651,29560215,29558878,29554992,29554488,29553183,29551361,29548762,29546267,29545450	Gene ID= ENSG00000205534.6 TPM= 3.06 Transcript Type= NA
chr16	29545011	29613723	29545011	29613723	-	transcript2350.chr16.nnic@SMG1P2	transcript2350.chr16.nnic	unprocessed_pseudogene	29613103,29569271,29566086,29565351,29561515,29560157,29558665,29554867,29554416,29553086,29551189,29548538,29546166,29545011	29613723,29569328,29566249,29565506,29561651,29560215,29558878,29554992,29554488,29553183,29551361,29548762,29546267,29545450	Gene ID= ENSG00000205534.6 TPM= 4.03 Transcript Type= NA
chr16	29545011	29595083	29545011	29595083	-	transcript2351.chr16.nnic@SMG1P2	transcript2351.chr16.nnic	unprocessed_pseudogene	29594887,29569612,29566086,29565351,29561515,29560157,29558665,29554867,29554416,29553086,29551189,29548538,29546166,29545011	29595083,29569751,29566249,29565506,29561651,29560215,29558878,29554992,29554488,29553183,29551361,29548762,29546267,29545450	Gene ID= ENSG00000205534.6 TPM= 2.09 Transcript Type= NA
chr16	29545011	29594794	29545011	29594794	-	transcript2355.chr16.nnic@SMG1P2	transcript2355.chr16.nnic	unprocessed_pseudogene	29594614,29566086,29565351,29561515,29560157,29558665,29554867,29554416,29553086,29551189,29548538,29546166,29545011	29594794,29566249,29565506,29561651,29560215,29558878,29554992,29554488,29553183,29551361,29548762,29546267,29545450	Gene ID= ENSG00000205534.6 TPM= 2.09 Transcript Type= NA
chr16	29790720	29805385	29790720	29805385	+	ENST00000160827.8@KIF22	ENST00000160827.8	protein_coding	29790720,29796893,29798374,29798593,29798975,29799264,29799628,29799913,29802769,29803449,29803998,29804814,29805115,29805263	29790829,29797088,29798501,29798747,29799184,29799494,29799781,29800048,29802937,29803608,29804065,29805026,29805174,29805385	Gene ID= ENSG00000079616.12 TPM= 27.03 Transcript Type= protein_coding
chr16	29804696	29805384	29804696	29805384	+	transcript2405.chr16.nic@KIF22	transcript2405.chr16.nic	protein_coding	29804696,29805263	29805174,29805384	Gene ID= ENSG00000079616.12 TPM= 18.34 Transcript Type= NA
chr16	29806106	29811160	29806106	29811160	+	ENST00000545521.5@MAZ	ENST00000545521.5	protein_coding	29806106,29806807,29806978,29808230,29808570,29810077	29806180,29806893,29807828,29808293,29808741,29811160	Gene ID= ENSG00000103495.13 TPM= 17.21 Transcript Type= protein_coding
chr16	29806537	29811164	29806537	29811164	+	ENST00000322945.10@MAZ	ENST00000322945.10	protein_coding	29806537,29806978,29808230,29808570,29810077	29806893,29807828,29808293,29808741,29811164	Gene ID= ENSG00000103495.13 TPM= 95.88 Transcript Type= protein_coding
chr16	29806596	29811164	29806596	29811164	+	ENST00000219782.10@MAZ	ENST00000219782.10	protein_coding	29806596,29806978,29808230,29808570,29809540,29810077	29806893,29807828,29808293,29808741,29809764,29811164	Gene ID= ENSG00000103495.13 TPM= 51.48 Transcript Type= protein_coding
chr16	29806571	29811158	29806571	29811158	+	ENST00000566906.6@MAZ	ENST00000566906.6	protein_coding	29806571,29806978,29810116	29806893,29807066,29811158	Gene ID= ENSG00000103495.13 TPM= 17.54 Transcript Type= protein_coding
chr16	29808051	29811125	29808051	29811125	+	ENST00000568544.5@MAZ	ENST00000568544.5	protein_coding	29808051,29808570,29810077	29808293,29808741,29811125	Gene ID= ENSG00000103495.13 TPM= 2.58 Transcript Type= protein_coding
chr16	29808146	29811128	29808146	29811128	+	ENST00000568282.1@MAZ	ENST00000568282.1	protein_coding	29808146,29808570,29809540,29810088	29808293,29808741,29809771,29811128	Gene ID= ENSG00000103495.13 TPM= 2.09 Transcript Type= protein_coding
chr16	29808231	29811165	29808231	29811165	+	transcript2406.chr16.nnic@NA	transcript2406.chr16.nnic	NA	29808231	29811165	Gene ID= novel_gene_chr16_2407 TPM= 2.41 Transcript Type= NA
chr16	29815952	29820117	29815952	29820117	+	ENST00000320330.7@PAGR1	ENST00000320330.7	protein_coding	29815952,29817210,29819555	29817007,29817292,29820117	Gene ID= ENSG00000280789.1 TPM= 44.4 Transcript Type= protein_coding
chr16	29820394	29848039	29820394	29848039	+	ENST00000395353.5@MVP	ENST00000395353.5	protein_coding	29820394,29830474,29830878,29833733,29833935,29835704,29836722,29840178,29841596,29841915,29844493,29845863,29846158,29847197,29847762	29820510,29830674,29831073,29833856,29834066,29835798,29836958,29840459,29841840,29842112,29844879,29845979,29846284,29847385,29848039	Gene ID= ENSG00000013364.18 TPM= 78.67 Transcript Type= protein_coding
chr16	29820408	29848039	29820408	29848039	+	ENST00000357402.9@MVP	ENST00000357402.9	protein_coding	29820408,29830515,29830878,29833733,29833935,29835704,29836722,29840178,29841596,29841915,29844493,29845863,29846158,29847197,29847762	29820510,29830674,29831073,29833856,29834066,29835798,29836958,29840459,29841840,29842112,29844879,29845979,29846284,29847385,29848039	Gene ID= ENSG00000013364.18 TPM= 124.04 Transcript Type= protein_coding
chr16	29858357	29863736	29858357	29863736	-	ENST00000219789.10@CDIPT	ENST00000219789.10	protein_coding	29862815,29862586,29861106,29860581,29859442,29858357	29863736,29862720,29861259,29860662,29859523,29859334	Gene ID= ENSG00000103502.13 TPM= 51.16 Transcript Type= protein_coding
chr16	29858358	29863185	29858358	29863185	-	transcript2411.chr16.nic@CDIPT	transcript2411.chr16.nic	protein_coding	29862586,29861106,29860581,29859442,29858358	29863185,29861259,29860662,29859523,29859334	Gene ID= ENSG00000103502.13 TPM= 5.79 Transcript Type= NA
chr16	29906353	29926201	29906353	29926201	-	transcript2414.chr16.nnic@KCTD13	transcript2414.chr16.nnic	protein_coding	29925790,29923190,29911960,29911815,29910978,29906353	29926201,29923359,29912049,29911867,29911173,29907974	Gene ID= ENSG00000174943.9 TPM= 1.93 Transcript Type= NA
chr16	29962005	29973047	29962005	29973047	+	transcript2426.chr16.nic@TMEM219	transcript2426.chr16.nic	protein_coding	29962005,29963110,29963400,29968025,29971408,29972950	29962132,29963308,29963589,29968254,29971578,29973047	Gene ID= ENSG00000149932.16 TPM= 39.9 Transcript Type= NA
chr16	29962030	29973052	29962030	29973052	+	ENST00000279396.10@TMEM219	ENST00000279396.10	protein_coding	29962030,29963107,29963400,29968025,29971408,29972950	29962132,29963308,29963589,29968254,29971578,29973052	Gene ID= ENSG00000149932.16 TPM= 65.96 Transcript Type= protein_coding
chr16	29963172	29973048	29963172	29973048	+	ENST00000570255.5@TMEM219	ENST00000570255.5	protein_coding	29963172,29963400,29968025,29971408,29972042,29972950	29963308,29963589,29968254,29971578,29972140,29973048	Gene ID= ENSG00000149932.16 TPM= 1.28 Transcript Type= nonsense_mediated_decay
chr16	29973641	29988398	29973641	29988398	+	ENST00000308893.8@TAOK2	ENST00000308893.8	protein_coding	29973641,29977738,29978089,29978252,29978799,29978974,29979195,29979417,29981661,29981859,29982734,29983072,29983503,29985213,29985658,29986265	29974648,29977904,29978160,29978353,29978844,29979070,29979308,29979508,29981754,29981940,29982901,29983332,29983664,29985578,29985861,29988398	Gene ID= ENSG00000149930.17 TPM= 24.13 Transcript Type= protein_coding
chr16	29992321	29996436	29992321	29996436	-	ENST00000279392.7@HIRIP3	ENST00000279392.7	protein_coding	29995541,29995343,29995103,29993906,29993640,29993459,29992321	29996436,29995463,29995217,29994843,29993808,29993557,29993370	Gene ID= ENSG00000149929.15 TPM= 7.72 Transcript Type= protein_coding
chr16	29992996	29996119	29992996	29996119	-	transcript2433.chr16.nic@HIRIP3	transcript2433.chr16.nic	protein_coding	29995541,29995343,29995103,29993906,29993459,29992996	29996119,29995463,29995217,29994843,29993808,29993370	Gene ID= ENSG00000149929.15 TPM= 1.93 Transcript Type= NA
chr16	29995294	30005793	29995294	30005793	+	ENST00000563197.5@INO80E	ENST00000563197.5	protein_coding	29995294,29996547,29996808,30000758,30000929,30001414,30005221	29996391,29996617,29996860,30000836,30001040,30001530,30005793	Gene ID= ENSG00000169592.14 TPM= 7.72 Transcript Type= protein_coding
chr16	30024427	30031259	30024427	30031259	-	ENST00000380495.8@FAM57B	ENST00000380495.8	protein_coding	30030403,30029432,30026609,30025726,30024427	30031259,30029515,30026843,30025821,30025467	Gene ID= ENSG00000149926.13 TPM= 5.79 Transcript Type= protein_coding
chr16	30053090	30070414	30053090	30070414	+	ENST00000338110.9@ALDOA	ENST00000338110.9	protein_coding	30053090,30053464,30054784,30055172,30063729,30064424,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30053217,30053499,30054927,30055327,30064248,30064505,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070414	Gene ID= ENSG00000149925.17 TPM= 953.25 Transcript Type= protein_coding
chr16	30053090	30070420	30053090	30070420	+	ENST00000627059.2@ALDOA	ENST00000627059.2	protein_coding	30053090,30053464,30054784,30055172,30063729,30064424,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30053217,30053499,30054927,30055327,30064248,30064505,30067366,30067661,30068700,30068990,30069389,30069673,30070029,30070420	Gene ID= ENSG00000149925.17 TPM= 33.17 Transcript Type= protein_coding
chr16	30064644	30070414	30064644	30070414	+	transcript2453.chr16.nic@ALDOA	transcript2453.chr16.nic	protein_coding	30064644,30065876,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30064784,30065927,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070414	Gene ID= ENSG00000149925.17 TPM= 472.39 Transcript Type= NA
chr16	30064646	30070414	30064646	30070414	+	transcript2455.chr16.nnic@ALDOA	transcript2455.chr16.nnic	protein_coding	30064646,30064703,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30064656,30064784,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070414	Gene ID= ENSG00000149925.17 TPM= 4354.53 Transcript Type= NA
chr16	30065734	30070411	30065734	30070411	+	ENST00000564595.6@ALDOA	ENST00000564595.6	protein_coding	30065734,30066885,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30065927,30067038,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070411	Gene ID= ENSG00000149925.17 TPM= 80.13 Transcript Type= protein_coding
chr16	30064497	30070411	30064497	30070411	+	ENST00000412304.6@ALDOA	ENST00000412304.6	protein_coding	30064497,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30064784,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070411	Gene ID= ENSG00000149925.17 TPM= 2333.17 Transcript Type= protein_coding
chr16	30065148	30070420	30065148	30070420	+	ENST00000564546.5@ALDOA	ENST00000564546.5	protein_coding	30065148,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30065927,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070420	Gene ID= ENSG00000149925.17 TPM= 4891.8 Transcript Type= protein_coding
chr16	30064185	30070257	30064185	30070257	+	ENST00000569545.5@ALDOA	ENST00000569545.5	protein_coding	30064185,30064424,30065876,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30064248,30064505,30065927,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070257	Gene ID= ENSG00000149925.17 TPM= 5.03 Transcript Type= protein_coding
chr16	30064274	30070414	30064274	30070414	+	ENST00000563060.6@ALDOA	ENST00000563060.6	protein_coding	30064274,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30064505,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070414	Gene ID= ENSG00000149925.17 TPM= 687.79 Transcript Type= protein_coding
chr16	30065777	30070380	30065777	30070380	+	ENST00000395240.7@ALDOA	ENST00000395240.7	protein_coding	30065777,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30065927,30067366,30067661,30068700,30068990,30069389,30069673,30070029,30070380	Gene ID= ENSG00000149925.17 TPM= 10.34 Transcript Type= protein_coding
chr16	30069262	30070414	30069262	30070414	+	ENST00000566130.1@ALDOA	ENST00000566130.1	protein_coding	30069262,30069499,30069830,30070117	30069389,30069673,30070029,30070414	Gene ID= ENSG00000149925.17 TPM= 681.26 Transcript Type= retained_intron
chr16	30075990	30085377	30075990	30085377	+	ENST00000279387.11@PPP4C	ENST00000279387.11	protein_coding	30075990,30076315,30081259,30082484,30082746,30083394,30083655,30084666,30084933	30076094,30076475,30081310,30082534,30082847,30083567,30083781,30084855,30085377	Gene ID= ENSG00000149923.13 TPM= 148.53 Transcript Type= protein_coding
chr16	30076023	30085356	30076023	30085356	+	ENST00000627746.2@PPP4C	ENST00000627746.2	protein_coding	30076023,30076315,30082484,30082746,30083394,30083655,30084666,30084933	30076094,30076475,30082534,30082847,30083567,30083781,30084855,30085356	Gene ID= ENSG00000149923.13 TPM= 2.37 Transcript Type= protein_coding
chr16	30076007	30085347	30076007	30085347	+	ENST00000563200.5@PPP4C	ENST00000563200.5	protein_coding	30076007,30076315,30081259,30082484,30082746,30083394,30084666,30084933	30076094,30076475,30081310,30082534,30082847,30083781,30084855,30085347	Gene ID= ENSG00000149923.13 TPM= 1.93 Transcript Type= retained_intron
chr16	30092313	30093829	30092313	30093829	-	transcript2593.chr16.nnic@NA	transcript2593.chr16.nnic	NA	30092313	30093829	Gene ID= novel_gene_chr16_2594 TPM= 7.72 Transcript Type= NA
chr16	30092314	30096213	30092314	30096213	-	transcript2586.chr16.nic@YPEL3	transcript2586.chr16.nic	protein_coding	30096097,30095252,30094998,30094789,30092314	30096213,30095434,30095146,30094897,30092799	Gene ID= ENSG00000090238.11 TPM= 7.24 Transcript Type= NA
chr16	30092349	30096244	30092349	30096244	-	ENST00000398838.8@YPEL3	ENST00000398838.8	protein_coding	30096097,30095252,30095103,30094789,30092349	30096244,30095434,30095146,30094897,30092799	Gene ID= ENSG00000090238.11 TPM= 41.03 Transcript Type= protein_coding
chr16	30096363	30097148	30096363	30097148	+	transcript2591.chr16.nnic@NA	transcript2591.chr16.nnic	NA	30096363	30097148	Gene ID= novel_gene_chr16_2592 TPM= 5.79 Transcript Type= NA
chr16	30114105	30123261	30114105	30123261	-	transcript2581.chr16.nic@MAPK3	transcript2581.chr16.nic	protein_coding	30123040,30121824,30118349,30118047,30117670,30117154,30116894,30116636,30115595,30114105	30123261,30122006,30118538,30118163,30117784,30117285,30117003,30116790,30115645,30114708	Gene ID= ENSG00000102882.11 TPM= 10.45 Transcript Type= NA
chr16	30114105	30123294	30114105	30123294	-	ENST00000263025.8@MAPK3	ENST00000263025.8	protein_coding	30123040,30121824,30118349,30118047,30117670,30117154,30116894,30116636,30114105	30123294,30122006,30118538,30118163,30117784,30117285,30117003,30116790,30114708	Gene ID= ENSG00000102882.11 TPM= 30.73 Transcript Type= protein_coding
chr16	30114106	30123309	30114106	30123309	-	ENST00000322266.9@MAPK3	ENST00000322266.9	protein_coding	30123040,30121824,30118349,30118047,30117670,30116894,30116636,30114106	30123309,30122006,30118538,30118163,30117784,30117003,30116790,30114708	Gene ID= ENSG00000102882.11 TPM= 4.18 Transcript Type= protein_coding
chr16	30183422	30189076	30183422	30189076	+	ENST00000219150.9@CORO1A	ENST00000219150.9	protein_coding	30183422,30185209,30186598,30186816,30187039,30187382,30187725,30187942,30188192,30188361,30188860	30183725,30185407,30186720,30186945,30187223,30187501,30187829,30188087,30188249,30188576,30189076	Gene ID= ENSG00000102879.15 TPM= 9.65 Transcript Type= protein_coding
chr16	30192935	30194306	30192935	30194306	-	ENST00000305321.4@BOLA2B	ENST00000305321.4	protein_coding	30193533,30193358,30192935	30194306,30193455,30193074	Gene ID= ENSG00000169627.7 TPM= 16.41 Transcript Type= protein_coding
chr16	30193878	30197561	30193878	30197561	+	transcript2610.chr16.nic@SLX1A	transcript2610.chr16.nic	protein_coding	30193878,30196974,30197270,30197437	30195227,30197101,30197357,30197561	Gene ID= ENSG00000132207.17 TPM= 5.79 Transcript Type= NA
chr16	30193925	30197561	30193925	30197561	+	transcript2611.chr16.nic@SLX1A	transcript2611.chr16.nic	protein_coding	30193925,30197270,30197437	30197101,30197357,30197561	Gene ID= ENSG00000132207.17 TPM= 18.34 Transcript Type= NA
chr16	30193904	30197561	30193904	30197561	+	ENST00000345535.8@SLX1A	ENST00000345535.8	protein_coding	30193904,30194740,30196974,30197270,30197437	30194272,30194791,30197101,30197357,30197561	Gene ID= ENSG00000132207.17 TPM= 6.76 Transcript Type= protein_coding
chr16	30193917	30197561	30193917	30197561	+	ENST00000251303.10@SLX1A	ENST00000251303.10	protein_coding	30193917,30194740,30194886,30196974,30197270,30197437	30194272,30194791,30195227,30197101,30197357,30197561	Gene ID= ENSG00000132207.17 TPM= 37.65 Transcript Type= protein_coding
chr16	30193887	30197531	30193887	30197531	+	ENST00000565081.1@SLX1A	ENST00000565081.1	protein_coding	30193887,30194886,30196974,30197270,30197437	30194791,30195227,30197101,30197357,30197531	Gene ID= ENSG00000132207.17 TPM= 8.69 Transcript Type= retained_intron
chr16	30194433	30204306	30194433	30204306	+	ENST00000565342.5@SLX1A-SULT1A3	ENST00000565342.5	processed_transcript	30194433,30194886,30196974,30197270,30200725,30200981,30201196,30202690,30202912,30203505,30203808	30194791,30195227,30197101,30197357,30200876,30201106,30201293,30202816,30203006,30203685,30204306	Gene ID= ENSG00000213599.10 TPM= 9.17 Transcript Type= processed_transcript
chr16	30199231	30204028	30199231	30204028	+	ENST00000338971.9@SULT1A3	ENST00000338971.9	protein_coding	30199231,30200725,30200981,30201196,30202690,30202912,30203505,30203808	30199327,30200876,30201106,30201293,30202816,30203006,30203685,30204028	Gene ID= ENSG00000261052.5 TPM= 2.41 Transcript Type= protein_coding
chr16	30285023	30335702	30285023	30335702	-	transcript2618.chr16.nnic@SMG1P5	transcript2618.chr16.nnic	transcribed_unprocessed_pseudogene	30334975,30305790,30305055,30301222,30300800,30299869,30298377,30294566,30294115,30293099,30291203,30288561,30286167,30285023	30335702,30305953,30305210,30301358,30301067,30299927,30298590,30294691,30294187,30293196,30291375,30288785,30286268,30285457	Gene ID= ENSG00000183604.14 TPM= 4.51 Transcript Type= NA
chr16	30285023	30335702	30285023	30335702	-	transcript2619.chr16.nnic@SMG1P5	transcript2619.chr16.nnic	transcribed_unprocessed_pseudogene	30334975,30305790,30305055,30301222,30300948,30299869,30298377,30294566,30294115,30293099,30291203,30288561,30286167,30285023	30335702,30305953,30305210,30301358,30301067,30299927,30298590,30294691,30294187,30293196,30291375,30288785,30286268,30285457	Gene ID= ENSG00000183604.14 TPM= 5.47 Transcript Type= NA
chr16	30285023	30334844	30285023	30334844	-	transcript2621.chr16.nnic@SMG1P5	transcript2621.chr16.nnic	transcribed_unprocessed_pseudogene	30334702,30305790,30305055,30301222,30299869,30298377,30294566,30294115,30293099,30291203,30288561,30286167,30285023	30334844,30305953,30305210,30301358,30299927,30298590,30294691,30294187,30293196,30291375,30288785,30286268,30285457	Gene ID= ENSG00000183604.14 TPM= 4.66 Transcript Type= NA
chr16	30285023	30335702	30285023	30335702	-	transcript2623.chr16.nnic@SMG1P5	transcript2623.chr16.nnic	transcribed_unprocessed_pseudogene	30334975,30305790,30301222,30299869,30298377,30294566,30294115,30293099,30291203,30288561,30286167,30285023	30335702,30305953,30301358,30299927,30298590,30294691,30294187,30293196,30291375,30288785,30286268,30285457	Gene ID= ENSG00000183604.14 TPM= 8.37 Transcript Type= NA
chr16	30285023	30335386	30285023	30335386	-	transcript2624.chr16.nnic@SMG1P5	transcript2624.chr16.nnic	transcribed_unprocessed_pseudogene	30334975,30301222,30299869,30298377,30294566,30294115,30293099,30291203,30288561,30286167,30285023	30335386,30301358,30299927,30298590,30294691,30294187,30293196,30291375,30288785,30286268,30285457	Gene ID= ENSG00000183604.14 TPM= 4.18 Transcript Type= NA
chr16	30285023	30335374	30285023	30335374	-	ENST00000411546.3@SMG1P5	ENST00000411546.3	transcribed_unprocessed_pseudogene	30334975,30305790,30305055,30301222,30299869,30298377,30294566,30294115,30293099,30291203,30288561,30286167,30285023	30335374,30305953,30305210,30301358,30299927,30298590,30294691,30294187,30293196,30291375,30288785,30286268,30285457	Gene ID= ENSG00000183604.14 TPM= 41.34 Transcript Type= processed_transcript
chr16	30333226	30335397	30333226	30335397	-	transcript2628.chr16.nnic@NA	transcript2628.chr16.nnic	NA	30333226	30335397	Gene ID= novel_gene_chr16_2629 TPM= 2.9 Transcript Type= NA
chr16	30350766	30355361	30350766	30355361	-	ENST00000305596.7@CD2BP2	ENST00000305596.7	protein_coding	30355212,30354604,30354184,30353901,30353368,30353181,30350766	30355361,30354707,30354322,30354058,30353800,30353287,30353095	Gene ID= ENSG00000169217.8 TPM= 69.5 Transcript Type= protein_coding
chr16	30357102	30370524	30357102	30370524	-	transcript2640.chr16.nic@TBC1D10B	transcript2640.chr16.nic	protein_coding	30369228,30365495,30365105,30364900,30359727,30359538,30358663,30357102	30370524,30365594,30365212,30365006,30359841,30359603,30358817,30358573	Gene ID= ENSG00000169221.13 TPM= 11.58 Transcript Type= NA
chr16	30357102	30370264	30357102	30370264	-	ENST00000409939.7@TBC1D10B	ENST00000409939.7	protein_coding	30369228,30365495,30365105,30364900,30359727,30359538,30359172,30358663,30357102	30370264,30365594,30365212,30365006,30359841,30359603,30359361,30358817,30358573	Gene ID= ENSG00000169221.13 TPM= 56.95 Transcript Type= protein_coding
chr16	30374777	30377991	30374777	30377991	+	ENST00000322861.11@MYLPF	ENST00000322861.11	protein_coding	30374777,30375820,30376145,30376423,30376620,30377654,30377796	30374860,30375912,30376220,30376527,30376698,30377702,30377991	Gene ID= ENSG00000180209.11 TPM= 6240.9 Transcript Type= protein_coding
chr16	30395112	30400107	30395112	30400107	+	ENST00000613509.1@ZNF48	ENST00000613509.1	protein_coding	30395112,30395780,30397330	30395578,30395873,30400107	Gene ID= ENSG00000180035.12 TPM= 3.86 Transcript Type= protein_coding
chr16	30395419	30400108	30395419	30400108	+	ENST00000320159.2@ZNF48	ENST00000320159.2	protein_coding	30395419,30397330	30395873,30400108	Gene ID= ENSG00000180035.12 TPM= 4.83 Transcript Type= protein_coding
chr16	30407414	30418594	30407414	30418594	+	ENST00000434417.1@ZNF771	ENST00000434417.1	protein_coding	30407414,30408032,30417555	30407664,30408194,30418594	Gene ID= ENSG00000179965.11 TPM= 9.65 Transcript Type= protein_coding
chr16	30407297	30419407	30407297	30419407	+	ENST00000319296.9@ZNF771	ENST00000319296.9	protein_coding	30407297,30408045,30417555	30407664,30408194,30419407	Gene ID= ENSG00000179965.11 TPM= 40.54 Transcript Type= protein_coding
chr16	30423619	30430075	30423619	30430075	-	ENST00000319285.4@DCTPP1	ENST00000319285.4	protein_coding	30429880,30429057,30423619	30430075,30429167,30424533	Gene ID= ENSG00000179958.8 TPM= 60.81 Transcript Type= protein_coding
chr16	30443631	30446181	30443631	30446181	-	ENST00000478753.4@SEPHS2	ENST00000478753.4	protein_coding	30443631	30446181	Gene ID= ENSG00000179918.18 TPM= 224.92 Transcript Type= protein_coding
chr16	30524001	30526589	30524001	30526589	-	ENST00000380412.6@ZNF768	ENST00000380412.6	protein_coding	30526326,30524001	30526589,30526051	Gene ID= ENSG00000169957.9 TPM= 51.16 Transcript Type= protein_coding
chr16	30526918	30528294	30526918	30528294	+	ENST00000624451.1@AC002310.6	ENST00000624451.1	TEC	30526918	30528294	Gene ID= ENSG00000278922.1 TPM= 3.86 Transcript Type= TEC
chr16	30530367	30534918	30530367	30534918	-	ENST00000395094.3@ZNF747	ENST00000395094.3	protein_coding	30534197,30530367	30534918,30533148	Gene ID= ENSG00000169955.7 TPM= 14.48 Transcript Type= protein_coding
chr16	30553764	30558498	30553764	30558498	-	ENST00000395091.2@ZNF764	ENST00000395091.2	protein_coding	30557987,30557733,30553764	30558498,30557846,30556107	Gene ID= ENSG00000169951.9 TPM= 2.9 Transcript Type= protein_coding
chr16	30553764	30558263	30553764	30558263	-	ENST00000252797.6@ZNF764	ENST00000252797.6	protein_coding	30557987,30557733,30553764	30558263,30557846,30556110	Gene ID= ENSG00000169951.9 TPM= 2.9 Transcript Type= protein_coding
chr16	30569346	30572734	30569346	30572734	-	ENST00000223459.10@ZNF688	ENST00000223459.10	protein_coding	30571434,30571010,30569346	30572734,30571123,30570436	Gene ID= ENSG00000229809.8 TPM= 15.44 Transcript Type= protein_coding
chr16	30569677	30571698	30569677	30571698	-	transcript2707.chr16.nnic@ZNF688	transcript2707.chr16.nnic	protein_coding	30571293,30569677	30571698,30570436	Gene ID= ENSG00000229809.8 TPM= 8.04 Transcript Type= NA
chr16	30569677	30571730	30569677	30571730	-	transcript2708.chr16.nnic@ZNF688	transcript2708.chr16.nnic	protein_coding	30571434,30569677	30571730,30570436	Gene ID= ENSG00000229809.8 TPM= 10.94 Transcript Type= NA
chr16	30569729	30571730	30569729	30571730	-	transcript2710.chr16.nnic@ZNF688	transcript2710.chr16.nnic	protein_coding	30571434,30569729	30571730,30570436	Gene ID= ENSG00000229809.8 TPM= 1.93 Transcript Type= NA
chr16	30569686	30571672	30569686	30571672	-	ENST00000563665.3@ZNF688	ENST00000563665.3	protein_coding	30571010,30569686	30571672,30570436	Gene ID= ENSG00000229809.8 TPM= 14.8 Transcript Type= retained_intron
chr16	30602558	30610379	30602558	30610379	-	ENST00000287461.7@ZNF689	ENST00000287461.7	protein_coding	30609837,30609525,30602558	30610379,30609638,30605447	Gene ID= ENSG00000156853.12 TPM= 3.86 Transcript Type= protein_coding
chr16	30634498	30635318	30634498	30635318	+	transcript2716.chr16.nnic@NA	transcript2716.chr16.nnic	NA	30634498	30635318	Gene ID= novel_gene_chr16_2717 TPM= 1.93 Transcript Type= NA
chr16	30654881	30656413	30654881	30656413	+	transcript2719.chr16.nic@PRR14	transcript2719.chr16.nic	protein_coding	30654881,30655351,30655502,30655868,30656032	30655214,30655420,30655593,30655939,30656413	Gene ID= ENSG00000156858.11 TPM= 2.9 Transcript Type= NA
chr16	30655273	30656413	30655273	30656413	+	transcript2721.chr16.nic@PRR14	transcript2721.chr16.nic	protein_coding	30655273,30655502,30655868,30656032	30655420,30655593,30655939,30656413	Gene ID= ENSG00000156858.11 TPM= 2.9 Transcript Type= NA
chr16	30664457	30670810	30664457	30670810	+	ENST00000287468.5@FBRS	ENST00000287468.5	protein_coding	30664457,30664715,30665035,30665306,30665638,30666512,30666919,30667320,30667542,30668560,30668772,30669069	30664516,30664920,30665079,30665401,30665706,30666541,30666990,30667437,30667622,30668643,30668979,30670810	Gene ID= ENSG00000156860.15 TPM= 72.4 Transcript Type= protein_coding
chr16	30697706	30699057	30697706	30699057	-	transcript2726.chr16.nnic@NA	transcript2726.chr16.nnic	NA	30697706	30699057	Gene ID= novel_gene_chr16_2727 TPM= 7.72 Transcript Type= NA
chr16	30714509	30714956	30714509	30714956	-	transcript2730.chr16.nnic@NA	transcript2730.chr16.nnic	NA	30714509	30714956	Gene ID= novel_gene_chr16_2731 TPM= 1.93 Transcript Type= NA
chr16	30718477	30723806	30718477	30723806	-	transcript2728.chr16.nnic@NA	transcript2728.chr16.nnic	NA	30718477	30723806	Gene ID= novel_gene_chr16_2729 TPM= 4.83 Transcript Type= NA
chr16	30737251	30740125	30737251	30740125	+	transcript2724.chr16.nnic@NA	transcript2724.chr16.nnic	NA	30737251	30740125	Gene ID= novel_gene_chr16_2725 TPM= 26.06 Transcript Type= NA
chr16	30748270	30761176	30748270	30761176	+	ENST00000563588.5@PHKG2	ENST00000563588.5	protein_coding	30748270,30748803,30751106,30751549,30753232,30753394,30756182,30756367,30756590,30756804	30748490,30748915,30751281,30751603,30753297,30753557,30756272,30756520,30756715,30761176	Gene ID= ENSG00000156873.15 TPM= 16.41 Transcript Type= protein_coding
chr16	30748440	30757331	30748440	30757331	+	ENST00000328273.11@PHKG2	ENST00000328273.11	protein_coding	30748440,30748803,30751106,30751549,30753232,30753394,30756182,30756355,30756590,30756804	30748490,30748915,30751281,30751603,30753297,30753557,30756272,30756520,30756715,30757331	Gene ID= ENSG00000156873.15 TPM= 13.51 Transcript Type= protein_coding
chr16	30761997	30776307	30761997	30776307	+	ENST00000324685.10@RNF40	ENST00000324685.10	protein_coding	30761997,30762475,30763118,30763418,30764179,30764938,30765181,30765425,30766163,30766379,30766741,30767894,30768103,30768619,30768838,30769186,30769475,30771833,30772089,30773938	30762360,30762677,30763285,30763559,30764385,30765059,30765327,30765499,30766282,30766558,30766876,30768015,30768530,30768736,30768987,30769398,30769600,30771973,30772190,30776307	Gene ID= ENSG00000103549.21 TPM= 12.55 Transcript Type= protein_coding
chr16	30762309	30767485	30762309	30767485	+	transcript2745.chr16.nic@RNF40	transcript2745.chr16.nic	protein_coding	30762309,30762475,30763118,30763418,30764179,30764938,30765181,30765425	30762360,30762677,30763285,30763559,30764385,30765059,30765327,30767485	Gene ID= ENSG00000103549.21 TPM= 1.93 Transcript Type= NA
chr16	30778449	30787202	30778449	30787202	-	ENST00000262525.5@ZNF629	ENST00000262525.5	protein_coding	30787028,30784410,30778449	30787202,30784515,30784254	Gene ID= ENSG00000102870.5 TPM= 22.2 Transcript Type= protein_coding
chr16	30887795	30894960	30887795	30894960	-	ENST00000215115.4@BCL7C	ENST00000215115.4	protein_coding	30893853,30893212,30892840,30892586,30888860,30887795	30894960,30893290,30892948,30892747,30888945,30887990	Gene ID= ENSG00000099385.11 TPM= 55.02 Transcript Type= protein_coding
chr16	30896606	30903547	30896606	30903547	+	transcript2759.chr16.nnic@CTF1	transcript2759.chr16.nnic	protein_coding	30896606,30899307,30902078	30896668,30899533,30903547	Gene ID= ENSG00000150281.6 TPM= 7.72 Transcript Type= NA
chr16	30949066	30954938	30949066	30954938	+	ENST00000318663.4@ORAI3	ENST00000318663.4	protein_coding	30949066,30953185	30949517,30954938	Gene ID= ENSG00000175938.6 TPM= 27.03 Transcript Type= protein_coding
chr16	30955958	30958211	30955958	30958211	-	transcript2767.chr16.nnic@NA	transcript2767.chr16.nnic	NA	30955958	30958211	Gene ID= novel_gene_chr16_2768 TPM= 1.93 Transcript Type= NA
chr16	30957294	30984664	30957294	30984664	+	ENST00000262519.13@SETD1A	ENST00000262519.13	protein_coding	30957294,30958717,30959091,30961267,30963433,30964094,30964612,30965601,30966884,30967501,30969305,30969602,30971378,30979145,30980485,30980739,30981061,30983635,30983850	30957964,30958881,30959186,30961537,30963554,30964323,30965461,30966386,30967060,30967588,30969462,30969689,30971719,30980194,30980657,30980849,30981180,30983772,30984664	Gene ID= ENSG00000099381.17 TPM= 5.79 Transcript Type= protein_coding
chr16	30980010	30984664	30980010	30984664	+	transcript2765.chr16.nic@SETD1A	transcript2765.chr16.nic	protein_coding	30980010,30980739,30981061,30983635,30983850	30980657,30980849,30981180,30983772,30984664	Gene ID= ENSG00000099381.17 TPM= 7.72 Transcript Type= NA
chr16	30985211	30989152	30985211	30989152	+	ENST00000297679.9@HSD3B7	ENST00000297679.9	protein_coding	30985211,30985653,30986049,30986423,30986605,30986840,30987768	30985297,30985824,30986204,30986531,30986704,30987002,30989152	Gene ID= ENSG00000099377.13 TPM= 5.79 Transcript Type= protein_coding
chr16	31033531	31040163	31033531	31040163	+	transcript2778.chr16.nic@STX4	transcript2778.chr16.nic	protein_coding	31033531,31034013,31034204,31034462,31034970,31037926,31038114,31038510,31039541,31039723,31039912	31033835,31034114,31034325,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31040163	Gene ID= ENSG00000103496.14 TPM= 4.83 Transcript Type= NA
chr16	31033569	31040163	31033569	31040163	+	transcript2783.chr16.nic@STX4	transcript2783.chr16.nic	protein_coding	31033569,31034013,31034226,31034970,31037926,31038114,31038510,31039541,31039723,31039912	31033835,31034114,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31040163	Gene ID= ENSG00000103496.14 TPM= 6.76 Transcript Type= NA
chr16	31033491	31040168	31033491	31040168	+	ENST00000313843.7@STX4	ENST00000313843.7	protein_coding	31033491,31034013,31034226,31034462,31034970,31037926,31038114,31038510,31039541,31039723,31039912	31033835,31034114,31034325,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31040168	Gene ID= ENSG00000103496.14 TPM= 47.3 Transcript Type= protein_coding
chr16	31060850	31074320	31060850	31074320	-	ENST00000300849.4@ZNF668	ENST00000300849.4	protein_coding	31073659,31063813,31060850	31074320,31064481,31062280	Gene ID= ENSG00000167394.12 TPM= 27.99 Transcript Type= protein_coding
chr16	31074422	31084196	31074422	31084196	+	ENST00000300850.5@ZNF646	ENST00000300850.5	protein_coding	31074422,31076246,31082971	31074631,31081701,31084196	Gene ID= ENSG00000167395.10 TPM= 26.06 Transcript Type= protein_coding
chr16	31090842	31094956	31090842	31094956	-	ENST00000354895.4@VKORC1	ENST00000354895.4	protein_coding	31094557,31090842	31094956,31091342	Gene ID= ENSG00000167397.14 TPM= 2.9 Transcript Type= protein_coding
chr16	31090842	31094957	31090842	31094957	-	ENST00000394975.2@VKORC1	ENST00000394975.2	protein_coding	31094557,31093312,31090842	31094957,31093421,31091342	Gene ID= ENSG00000167397.14 TPM= 22.2 Transcript Type= protein_coding
chr16	31090842	31094940	31090842	31094940	-	ENST00000319788.11@VKORC1	ENST00000319788.11	protein_coding	31094557,31093312,31092783,31090842	31094940,31093421,31092864,31091342	Gene ID= ENSG00000167397.14 TPM= 3.86 Transcript Type= protein_coding
chr16	31108294	31112791	31108294	31112791	+	ENST00000219794.10@BCKDK	ENST00000219794.10	protein_coding	31108294,31109047,31109511,31109673,31110077,31110205,31110401,31110688,31111091,31111300,31111869,31112121	31108479,31109418,31109579,31109783,31110124,31110324,31110499,31110761,31111219,31111389,31112027,31112791	Gene ID= ENSG00000103507.13 TPM= 96.85 Transcript Type= protein_coding
chr16	31108294	31112567	31108294	31112567	+	ENST00000394950.7@BCKDK	ENST00000394950.7	protein_coding	31108294,31109047,31109511,31109673,31110077,31110205,31110401,31110688,31111091,31111300,31111869	31108479,31109418,31109579,31109783,31110124,31110324,31110499,31110761,31111219,31111389,31112567	Gene ID= ENSG00000103507.13 TPM= 59.69 Transcript Type= protein_coding
chr16	31115754	31131393	31115754	31131393	+	ENST00000543774.6@KAT8	ENST00000543774.6	protein_coding	31115754,31117463,31120186,31120339,31127035,31127189,31128050,31130017,31130267,31130456,31130746,31131195	31115869,31117892,31120260,31120514,31127088,31127353,31128139,31130157,31130360,31130606,31130900,31131393	Gene ID= ENSG00000103510.19 TPM= 46.82 Transcript Type= protein_coding
chr16	31117664	31131389	31117664	31131389	+	ENST00000219797.8@KAT8	ENST00000219797.8	protein_coding	31117664,31120186,31120339,31127035,31127189,31128050,31130017,31130267,31130456,31130746,31131195	31117892,31120260,31120514,31127088,31127353,31128139,31130157,31130360,31130606,31130900,31131389	Gene ID= ENSG00000103510.19 TPM= 36.2 Transcript Type= protein_coding
chr16	31117664	31131359	31117664	31131359	+	ENST00000448516.6@KAT8	ENST00000448516.6	protein_coding	31117664,31120186,31120339,31127035,31127189,31128050,31130017,31130267,31130456,31130746	31117892,31120260,31120514,31127088,31127353,31128139,31130157,31130360,31130606,31131359	Gene ID= ENSG00000103510.19 TPM= 2.9 Transcript Type= protein_coding
chr16	31118882	31121411	31118882	31121411	-	transcript2816.chr16.nnic@NA	transcript2816.chr16.nnic	NA	31118882	31121411	Gene ID= novel_gene_chr16_2817 TPM= 8.69 Transcript Type= NA
chr16	31123673	31124064	31123673	31124064	+	ENST00000613584.1@AC135050.6	ENST00000613584.1	sense_intronic	31123673	31124064	Gene ID= ENSG00000278133.1 TPM= 8.69 Transcript Type= sense_intronic
chr16	31180110	31194871	31180110	31194871	+	ENST00000254108.11@FUS	ENST00000254108.11	protein_coding	31180110,31182398,31182513,31183858,31184209,31184939,31186802,31188325,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31185179,31186836,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31194871	Gene ID= ENSG00000089280.18 TPM= 133.21 Transcript Type= protein_coding
chr16	31180138	31191602	31180138	31191602	+	ENST00000566605.5@FUS	ENST00000566605.5	protein_coding	31180138,31182398,31182513,31183858,31184209,31184939,31188325,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31185179,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31191602	Gene ID= ENSG00000089280.18 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr16	31180139	31183350	31180139	31183350	+	ENST00000487045.6@FUS	ENST00000487045.6	protein_coding	31180139,31182398,31182513	31180227,31182422,31183350	Gene ID= ENSG00000089280.18 TPM= 2.9 Transcript Type= retained_intron
chr16	31180150	31191602	31180150	31191602	+	ENST00000487509.6@FUS	ENST00000487509.6	protein_coding	31180150,31182398,31182513,31183858,31184209,31184939,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31191602	Gene ID= ENSG00000089280.18 TPM= 8.69 Transcript Type= retained_intron
chr16	31201485	31202992	31201485	31202992	-	ENST00000247470.9@PYCARD	ENST00000247470.9	protein_coding	31202417,31202147,31201485	31202992,31202203,31201841	Gene ID= ENSG00000103490.13 TPM= 4.83 Transcript Type= protein_coding
chr16	31214037	31227160	31214037	31227160	+	transcript2858.chr16.nnic@TRIM72	transcript2858.chr16.nnic	protein_coding	31214037,31214732,31219095,31219289,31220896,31222827,31224181,31225913	31214297,31215128,31219190,31219519,31220918,31222945,31224900,31227160	Gene ID= ENSG00000177238.13 TPM= 14.74 Transcript Type= NA
chr16	31214094	31226507	31214094	31226507	+	transcript2865.chr16.nnic@TRIM72	transcript2865.chr16.nnic	protein_coding	31214094,31214732,31219095,31219289,31220896,31222827,31224181,31225880	31214297,31215128,31219190,31219519,31220918,31222945,31224923,31226507	Gene ID= ENSG00000177238.13 TPM= 10.78 Transcript Type= NA
chr16	31214101	31227157	31214101	31227157	+	transcript2873.chr16.nnic@TRIM72	transcript2873.chr16.nnic	protein_coding	31214101,31214732,31219095,31219289,31220896,31222827,31224181,31226386	31214297,31215128,31219190,31219519,31220918,31222945,31226014,31227157	Gene ID= ENSG00000177238.13 TPM= 21.5 Transcript Type= NA
chr16	31214021	31231537	31214021	31231537	+	ENST00000322122.7@TRIM72	ENST00000322122.7	protein_coding	31214021,31214732,31219095,31219289,31220896,31222827,31224181	31214297,31215128,31219190,31219519,31220918,31222945,31231537	Gene ID= ENSG00000177238.13 TPM= 45.87 Transcript Type= protein_coding
chr16	31214116	31223932	31214116	31223932	+	transcript2883.chr16.nic@TRIM72	transcript2883.chr16.nic	protein_coding	31214116,31214732,31219095,31219289,31220896,31222827	31214297,31215128,31219190,31219519,31220918,31223932	Gene ID= ENSG00000177238.13 TPM= 8.82 Transcript Type= NA
chr16	31214093	31216456	31214093	31216456	+	transcript2889.chr16.nic@TRIM72	transcript2889.chr16.nic	protein_coding	31214093,31214732	31214297,31216456	Gene ID= ENSG00000177238.13 TPM= 30.89 Transcript Type= NA
chr16	31259994	31332892	31259994	31332892	+	ENST00000544665.7@ITGAM	ENST00000544665.7	protein_coding	31259994,31261692,31265395,31265811,31266030,31270954,31271847,31273365,31275549,31276671,31276920,31277967,31297514,31297742,31321241,31321464,31324399,31324651,31324958,31325263,31325500,31326856,31328147,31329228,31329798,31330081,31330308,31330504,31331165,31331636	31260092,31261797,31265498,31265881,31266147,31271084,31271992,31273518,31275699,31276744,31277049,31278109,31297654,31297954,31321371,31321627,31324553,31324782,31325031,31325404,31325622,31326935,31328230,31329303,31329905,31330164,31330421,31330605,31331275,31332892	Gene ID= ENSG00000169896.16 TPM= 5.79 Transcript Type= protein_coding
chr16	31425691	31426738	31425691	31426738	-	transcript2894.chr16.nnic@NA	transcript2894.chr16.nnic	NA	31425691	31426738	Gene ID= novel_gene_chr16_2895 TPM= 1.93 Transcript Type= NA
chr16	31427731	31428428	31427731	31428428	-	ENST00000287490.4@COX6A2	ENST00000287490.4	protein_coding	31428253,31428015,31427731	31428428,31428151,31427857	Gene ID= ENSG00000156885.5 TPM= 1574.1 Transcript Type= protein_coding
chr16	31427776	31428285	31427776	31428285	-	ENST00000565462.2@COX6A2	ENST00000565462.2	protein_coding	31428015,31427776	31428285,31427857	Gene ID= ENSG00000156885.5 TPM= 2.58 Transcript Type= retained_intron
chr16	31453668	31456508	31453668	31456508	+	transcript2910.chr16.nnic@NA	transcript2910.chr16.nnic	NA	31453668	31456508	Gene ID= novel_gene_chr16_2911 TPM= 23.17 Transcript Type= NA
chr16	31456711	31459736	31456711	31459736	-	ENST00000564629.1@AC026471.1	ENST00000564629.1	antisense_RNA	31456711	31459736	Gene ID= ENSG00000260267.1 TPM= 4.83 Transcript Type= antisense_RNA
chr16	31472059	31477958	31472059	31477958	+	ENST00000394863.7@TGFB1I1	ENST00000394863.7	protein_coding	31472059,31473441,31473682,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310	31472201,31473556,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477958	Gene ID= ENSG00000140682.18 TPM= 18.99 Transcript Type= protein_coding
chr16	31472138	31477958	31472138	31477958	+	transcript2919.chr16.nic@TGFB1I1	transcript2919.chr16.nic	protein_coding	31472138,31473441,31473682,31473835,31474152,31474350,31474563,31476012,31476862,31477310	31472201,31473556,31473734,31473977,31474239,31474455,31474757,31476562,31477010,31477958	Gene ID= ENSG00000140682.18 TPM= 2.58 Transcript Type= NA
chr16	31473426	31477958	31473426	31477958	+	ENST00000567607.5@TGFB1I1	ENST00000567607.5	protein_coding	31473426,31473682,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310	31473556,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477958	Gene ID= ENSG00000140682.18 TPM= 4.51 Transcript Type= protein_coding
chr16	31489489	31508413	31489489	31508413	-	ENST00000327237.6@C16orf58	ENST00000327237.6	protein_coding	31508074,31507764,31500686,31499493,31499302,31496849,31493866,31493603,31493467,31492978,31492197,31492009,31489489	31508413,31507878,31500731,31499525,31499407,31496950,31493936,31493787,31493524,31493048,31492340,31492086,31490932	Gene ID= ENSG00000140688.16 TPM= 10.62 Transcript Type= protein_coding
chr16	31489489	31508408	31489489	31508408	-	transcript2924.chr16.nic@C16orf58	transcript2924.chr16.nic	protein_coding	31508074,31507764,31500686,31499493,31499302,31496849,31493866,31492978,31492197,31492009,31489489	31508408,31507878,31500731,31499525,31499407,31496950,31493936,31493787,31492340,31492086,31490932	Gene ID= ENSG00000140688.16 TPM= 8.69 Transcript Type= NA
chr16	31713234	31761565	31713234	31761565	+	ENST00000316491.13@ZNF720	ENST00000316491.13	protein_coding	31713234,31722626,31723258,31753766,31759357	31713435,31722752,31723353,31753900,31761565	Gene ID= ENSG00000197302.10 TPM= 1.93 Transcript Type= protein_coding
chr16	31713237	31715532	31713237	31715532	+	transcript2937.chr16.nnic@NA	transcript2937.chr16.nnic	NA	31713237	31715532	Gene ID= novel_gene_chr16_2938 TPM= 1.93 Transcript Type= NA
chr16	31873758	31917357	31873758	31917357	+	ENST00000300870.14@ZNF267	ENST00000300870.14	protein_coding	31873758,31884498,31885161,31914476	31873969,31884624,31885256,31917357	Gene ID= ENSG00000185947.14 TPM= 3.86 Transcript Type= protein_coding
chr16	46660192	46689199	46660192	46689199	-	transcript2967.chr16.nic@VPS35	transcript2967.chr16.nic	protein_coding	46689131,46683508,46681377,46680671,46678943,46677315,46676583,46674564,46674314,46672265,46671705,46668930,46662983,46662243,46661718,46660192	46689199,46683606,46681520,46680853,46679156,46677398,46676692,46674660,46674462,46672472,46671860,46669052,46663162,46662482,46661861,46660651	Gene ID= ENSG00000069329.16 TPM= 1.93 Transcript Type= NA
chr16	46660192	46689199	46660192	46689199	-	transcript2968.chr16.nnic@VPS35	transcript2968.chr16.nnic	protein_coding	46689131,46683508,46682079,46681377,46680671,46678943,46677315,46676583,46674564,46674314,46672265,46671705,46662983,46662243,46661718,46660192	46689199,46683606,46682175,46681500,46680853,46679156,46677398,46676692,46674660,46674462,46672472,46671860,46663162,46662482,46661861,46660651	Gene ID= ENSG00000069329.16 TPM= 2.9 Transcript Type= NA
chr16	46802039	46831418	46802039	46831418	-	transcript2976.chr16.nnic@C16orf87	transcript2976.chr16.nnic	protein_coding	46831084,46824386,46816164,46814644,46814006,46809603,46802039	46831418,46824482,46816218,46814704,46814087,46809785,46803070	Gene ID= ENSG00000155330.9 TPM= 4.83 Transcript Type= NA
chr16	46802039	46831418	46802039	46831418	-	transcript2978.chr16.nnic@C16orf87	transcript2978.chr16.nnic	protein_coding	46831084,46824386,46816164,46809603,46802039	46831418,46824482,46816218,46809785,46803070	Gene ID= ENSG00000155330.9 TPM= 3.86 Transcript Type= NA
chr16	46802094	46831411	46802094	46831411	-	ENST00000285697.8@C16orf87	ENST00000285697.8	protein_coding	46831084,46824386,46809603,46802094	46831411,46824482,46809785,46803070	Gene ID= ENSG00000155330.9 TPM= 8.69 Transcript Type= protein_coding
chr16	46796686	46800450	46796686	46800450	-	transcript2987.chr16.nnic@NA	transcript2987.chr16.nnic	NA	46796686	46800450	Gene ID= novel_gene_chr16_2988 TPM= 5.79 Transcript Type= NA
chr16	46884378	46931297	46884378	46931297	+	ENST00000340124.8@GPT2	ENST00000340124.8	protein_coding	46884378,46884694,46897648,46900682,46906842,46909684,46916628,46918621,46922242,46924389,46926925,46928907	46884467,46884958,46897737,46900790,46906975,46909927,46916707,46918757,46922416,46924544,46927037,46931297	Gene ID= ENSG00000166123.13 TPM= 41.51 Transcript Type= protein_coding
chr16	46955362	46973788	46955362	46973788	-	ENST00000317089.9@DNAJA2	ENST00000317089.9	protein_coding	46973495,46971896,46971349,46968084,46967513,46964611,46959275,46959003,46955362	46973788,46971955,46971572,46968164,46967646,46964807,46959419,46959130,46957220	Gene ID= ENSG00000069345.11 TPM= 44.4 Transcript Type= protein_coding
chr16	47154387	47461274	47154387	47461274	-	ENST00000320640.10@ITFG1	ENST00000320640.10	protein_coding	47460838,47459103,47454013,47452733,47451396,47428804,47375876,47365788,47313729,47311240,47260545,47258632,47237965,47218868,47162540,47161750,47158873,47154387	47461274,47459175,47454158,47452790,47451470,47428898,47375940,47365869,47313823,47311412,47260695,47258740,47238008,47218946,47162664,47161832,47158990,47155778	Gene ID= ENSG00000129636.12 TPM= 14.48 Transcript Type= protein_coding
chr16	47256982	47461197	47256982	47461197	-	transcript3023.chr16.nic@ITFG1	transcript3023.chr16.nic	protein_coding	47460838,47459103,47454013,47452733,47451396,47428804,47375876,47365788,47313729,47311240,47260545,47256982	47461197,47459175,47454158,47452790,47451470,47428898,47375940,47365869,47313823,47311412,47260695,47258740	Gene ID= ENSG00000129636.12 TPM= 2.9 Transcript Type= NA
chr16	47448605	47461062	47448605	47461062	-	transcript3028.chr16.nic@ITFG1	transcript3028.chr16.nic	protein_coding	47460838,47459103,47454013,47452733,47451396,47448605	47461062,47459175,47454158,47452790,47451470,47450453	Gene ID= ENSG00000129636.12 TPM= 1.93 Transcript Type= NA
chr16	47448605	47461063	47448605	47461063	-	transcript3029.chr16.nic@ITFG1	transcript3029.chr16.nic	protein_coding	47460838,47459103,47454013,47452733,47448605	47461063,47459175,47454158,47452790,47451470	Gene ID= ENSG00000129636.12 TPM= 1.93 Transcript Type= NA
chr16	47461275	47699745	47461275	47699745	+	transcript3043.chr16.nnic@PHKB	transcript3043.chr16.nnic	protein_coding	47461275,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47593500,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47664885,47669215,47689041,47693378,47696381,47698448,47699229	47461426,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47593557,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47664975,47669417,47689175,47693507,47696488,47698588,47699745	Gene ID= ENSG00000102893.15 TPM= 2.25 Transcript Type= NA
chr16	47461326	47701523	47461326	47701523	+	ENST00000299167.12@PHKB	ENST00000299167.12	protein_coding	47461326,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47593500,47594137,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47665942,47669215,47689041,47693378,47696381,47698448,47699229	47461426,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47593557,47594214,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47666032,47669417,47689175,47693507,47696488,47698588,47701523	Gene ID= ENSG00000102893.15 TPM= 5.15 Transcript Type= protein_coding
chr16	47461327	47700343	47461327	47700343	+	ENST00000323584.9@PHKB	ENST00000323584.9	protein_coding	47461327,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47593500,47594137,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47664885,47669215,47689041,47693378,47696381,47698448,47699229	47461426,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47593557,47594214,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47664975,47669417,47689175,47693507,47696488,47698588,47700343	Gene ID= ENSG00000102893.15 TPM= 24.45 Transcript Type= protein_coding
chr16	48360531	48385185	48360531	48385185	-	transcript3079.chr16.nnic@SIAH1	transcript3079.chr16.nnic	protein_coding	48385134,48360531	48385185,48362430	Gene ID= ENSG00000196470.11 TPM= 2.9 Transcript Type= NA
chr16	48360531	48385450	48360531	48385450	-	ENST00000394725.2@SIAH1	ENST00000394725.2	protein_coding	48385204,48360531	48385450,48362430	Gene ID= ENSG00000196470.11 TPM= 40.54 Transcript Type= protein_coding
chr16	48561492	48610234	48561492	48610234	-	transcript3091.chr16.nic@N4BP1	transcript3091.chr16.nic	protein_coding	48609775,48561492	48610234,48562444	Gene ID= ENSG00000102921.7 TPM= 6.76 Transcript Type= NA
chr16	49277917	49281831	49277917	49281831	-	ENST00000219197.10@CBLN1	ENST00000219197.10	protein_coding	49281202,49280923,49277917	49281831,49281042,49279601	Gene ID= ENSG00000102924.11 TPM= 3.86 Transcript Type= protein_coding
chr16	49490604	49856135	49490604	49856135	-	ENST00000563137.6@ZNF423	ENST00000563137.6	protein_coding	49855735,49789487,49730771,49635660,49626170,49525363,49523624,49490604	49856135,49789546,49730971,49638874,49626254,49525494,49523739,49491304	Gene ID= ENSG00000102935.11 TPM= 310.83 Transcript Type= protein_coding
chr16	49852984	49855513	49852984	49855513	-	transcript3099.chr16.nnic@NA	transcript3099.chr16.nnic	NA	49852984	49855513	Gene ID= novel_gene_chr16_3100 TPM= 1.93 Transcript Type= NA
chr16	50024410	50037088	50024410	50037088	+	ENST00000458059.7@CNEP1R1	ENST00000458059.7	protein_coding	50024410,50025651,50026396,50029725,50033397,50034102,50035417	50025340,50025701,50026467,50029798,50033506,50034156,50037088	Gene ID= ENSG00000205423.11 TPM= 21.24 Transcript Type= protein_coding
chr16	50025251	50037085	50025251	50037085	+	transcript3110.chr16.nic@CNEP1R1	transcript3110.chr16.nic	protein_coding	50025251,50029725,50033397,50034102,50035417	50026467,50029798,50033506,50034156,50037085	Gene ID= ENSG00000205423.11 TPM= 2.9 Transcript Type= NA
chr16	50025206	50037087	50025206	50037087	+	ENST00000427478.6@CNEP1R1	ENST00000427478.6	protein_coding	50025206,50026396,50029725,50033397,50034102,50035417	50025340,50026467,50029798,50033506,50034156,50037087	Gene ID= ENSG00000205423.11 TPM= 8.69 Transcript Type= protein_coding
chr16	50025255	50037085	50025255	50037085	+	ENST00000568890.5@CNEP1R1	ENST00000568890.5	protein_coding	50025255,50026396,50033397,50034102,50035417	50025340,50026467,50033506,50034156,50037085	Gene ID= ENSG00000205423.11 TPM= 12.55 Transcript Type= nonsense_mediated_decay
chr16	50065941	50106387	50065941	50106387	+	ENST00000299192.7@HEATR3	ENST00000299192.7	protein_coding	50065941,50066367,50068780,50070178,50072605,50075571,50078741,50083937,50084134,50084569,50086215,50094705,50100230,50102259,50104939	50066269,50066539,50068867,50070290,50072714,50075711,50079018,50084027,50084291,50084651,50086351,50094793,50100373,50102435,50106387	Gene ID= ENSG00000155393.12 TPM= 1.93 Transcript Type= protein_coding
chr16	50152925	50229526	50152925	50229526	+	transcript3119.chr16.nnic@PAPD5	transcript3119.chr16.nnic	protein_coding	50152925,50153649,50211323,50214221,50216075,50217556,50222306,50223174,50224657,50224891,50225098,50227839,50229152	50153032,50154259,50211446,50214267,50216195,50217663,50222434,50223387,50224783,50224994,50225285,50228003,50229526	Gene ID= ENSG00000121274.12 TPM= 1.93 Transcript Type= NA
chr16	50319093	50369030	50319093	50369030	-	transcript3132.chr16.nnic@BRD7	transcript3132.chr16.nnic	protein_coding	50368726,50368039,50354793,50354425,50350023,50339976,50334711,50333574,50328669,50326284,50325748,50323587,50321982,50320663,50320248,50319887,50319093	50369030,50368298,50354922,50354482,50350167,50340086,50334895,50333697,50328744,50326391,50325883,50323698,50322038,50320774,50320391,50320030,50319266	Gene ID= ENSG00000166164.15 TPM= 5.79 Transcript Type= NA
chr16	50334711	50369030	50334711	50369030	-	transcript3134.chr16.nic@BRD7	transcript3134.chr16.nic	protein_coding	50368726,50368090,50354793,50354425,50350023,50339976,50334711	50369030,50368298,50354922,50354482,50350167,50340086,50334895	Gene ID= ENSG00000166164.15 TPM= 26.06 Transcript Type= NA
chr16	50666558	50668407	50666558	50668407	-	transcript3138.chr16.nnic@SNX20	transcript3138.chr16.nnic	protein_coding	50668249,50667909,50666558	50668407,50668041,50666916	Gene ID= ENSG00000167208.14 TPM= 1.93 Transcript Type= NA
chr16	50742340	50796882	50742340	50796882	+	transcript3142.chr16.nnic@CYLD	transcript3142.chr16.nnic	protein_coding	50742340,50742762,50744730,50749576,50751604,50754319,50775166,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742662,50742841,50744866,50750202,50751906,50754424,50775174,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796882	Gene ID= ENSG00000083799.17 TPM= 1.93 Transcript Type= NA
chr16	50742122	50796882	50742122	50796882	+	transcript3145.chr16.nic@CYLD	transcript3145.chr16.nic	protein_coding	50742122,50742762,50744730,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742216,50742841,50744866,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796882	Gene ID= ENSG00000083799.17 TPM= 3.21 Transcript Type= NA
chr16	50742050	50796881	50742050	50796881	+	ENST00000569418.5@CYLD	ENST00000569418.5	protein_coding	50742050,50742762,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742124,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796881	Gene ID= ENSG00000083799.17 TPM= 13.83 Transcript Type= protein_coding
chr16	50742120	50796882	50742120	50796882	+	ENST00000398568.6@CYLD	ENST00000398568.6	protein_coding	50742120,50742762,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742216,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796882	Gene ID= ENSG00000083799.17 TPM= 9.97 Transcript Type= protein_coding
chr16	50742066	50787746	50742066	50787746	+	transcript3169.chr16.nic@CYLD	transcript3169.chr16.nic	protein_coding	50742066,50742762,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855	50742124,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50787746	Gene ID= ENSG00000083799.17 TPM= 2.9 Transcript Type= NA
chr16	53130921	53327451	53130921	53327451	+	ENST00000564845.5@CHD9	ENST00000564845.5	protein_coding	53130921,53155926,53209482,53222644,53226366,53227396,53227548,53228983,53231419,53231647,53235185,53238343,53242840,53245336,53245595,53247293,53249871,53254438,53255600,53262987,53267294,53267927,53273626,53274213,53285596,53286226,53287957,53291725,53292833,53296956,53303720,53306237,53307681,53308686,53314377,53314823,53318212,53321526,53324020	53131058,53157541,53209813,53222755,53226512,53227464,53227603,53229100,53231505,53231784,53235306,53238586,53243016,53245479,53245850,53247503,53250066,53254605,53255779,53263097,53267490,53268126,53273785,53274302,53285699,53286343,53288014,53291767,53293052,53297158,53304625,53306397,53307905,53308854,53314516,53315044,53318340,53321630,53327451	Gene ID= ENSG00000177200.16 TPM= 3.86 Transcript Type= protein_coding
chr16	53131047	53226401	53131047	53226401	+	transcript3184.chr16.nic@CHD9	transcript3184.chr16.nic	protein_coding	53131047,53155926,53209482,53222644,53226366	53131298,53157541,53209813,53222755,53226401	Gene ID= ENSG00000177200.16 TPM= 3.86 Transcript Type= NA
chr16	53434439	53491648	53434439	53491648	+	transcript3195.chr16.nnic@RBL2	transcript3195.chr16.nnic	protein_coding	53434439,53439016,53442658,53447042,53451703,53453452,53453705,53454656,53459451,53461741,53462552,53464226,53465438,53467058,53469916,53470383,53470746,53479154,53479886,53480567,53481671,53490130,53490515	53434796,53439146,53442858,53447106,53451831,53453612,53453769,53454842,53459617,53461850,53462655,53464363,53465602,53467169,53470185,53470663,53470922,53479225,53479991,53480769,53481835,53490301,53491648	Gene ID= ENSG00000103479.15 TPM= 6.27 Transcript Type= NA
chr16	53434420	53491649	53434420	53491649	+	ENST00000262133.10@RBL2	ENST00000262133.10	protein_coding	53434420,53439016,53442658,53447042,53451703,53453452,53453705,53454656,53459451,53461741,53462552,53464226,53465438,53467058,53469916,53470383,53470746,53479154,53479886,53480567,53481671,53490130	53434796,53439146,53442858,53447106,53451831,53453612,53453769,53454842,53459617,53461850,53462655,53464363,53465602,53467169,53470185,53470663,53470922,53479225,53479991,53480769,53481835,53491649	Gene ID= ENSG00000103479.15 TPM= 56.47 Transcript Type= protein_coding
chr16	53492305	53503223	53492305	53503223	-	ENST00000570004.5@AKTIP	ENST00000570004.5	protein_coding	53503118,53500218,53498391,53495262,53495073,53494517,53494339,53494138,53492693,53492305	53503223,53500329,53498596,53495326,53495173,53494605,53494437,53494245,53492753,53492519	Gene ID= ENSG00000166971.16 TPM= 1.93 Transcript Type= protein_coding
chr16	53704139	54040222	53704139	54040222	+	transcript3227.chr16.nic@FTO	transcript3227.chr16.nic	protein_coding	53704139,53810140,53825864,53844155,53873786,53879844,53888832,53933985,54039345,54039546	53704229,53810217,53826491,53844298,53873865,53879987,53888951,53934109,54039434,54040222	Gene ID= ENSG00000140718.20 TPM= 1.93 Transcript Type= NA
chr16	53703963	54121941	53703963	54121941	+	ENST00000471389.5@FTO	ENST00000471389.5	protein_coding	53703963,53810140,53825864,53844155,53873786,53879844,53888832,53933985,54111762	53704229,53810217,53826491,53844298,53873865,53879987,53888951,53934109,54121941	Gene ID= ENSG00000140718.20 TPM= 6.76 Transcript Type= protein_coding
chr16	54283304	54286763	54283304	54286763	-	ENST00000329734.3@IRX3	ENST00000329734.3	protein_coding	54285784,54284497,54284246,54283304	54286763,54285613,54284312,54283740	Gene ID= ENSG00000177508.11 TPM= 38.61 Transcript Type= protein_coding
chr16	54917956	54928831	54917956	54928831	-	transcript3250.chr16.nic@CRNDE	transcript3250.chr16.nic	lincRNA	54928770,54925101,54923585,54920298,54917956	54928831,54925213,54923650,54920327,54919209	Gene ID= ENSG00000245694.9 TPM= 1.93 Transcript Type= NA
chr16	54918870	54928796	54918870	54928796	-	ENST00000502066.6@CRNDE	ENST00000502066.6	lincRNA	54928770,54925101,54923585,54920298,54918870	54928796,54925213,54923650,54920410,54919209	Gene ID= ENSG00000245694.9 TPM= 1.45 Transcript Type= lincRNA
chr16	54930862	54934485	54930862	54934485	+	ENST00000394636.8@IRX5	ENST00000394636.8	protein_coding	54930862,54932498,54933077	54931447,54932903,54934485	Gene ID= ENSG00000176842.14 TPM= 6.76 Transcript Type= protein_coding
chr16	55323760	55330760	55323760	55330760	+	ENST00000290552.7@IRX6	ENST00000290552.7	protein_coding	55323760,55326336,55327296,55327586,55328700,55330298	55325136,55326593,55327405,55327893,55329311,55330760	Gene ID= ENSG00000159387.7 TPM= 7.72 Transcript Type= protein_coding
chr16	55479198	55506237	55479198	55506237	+	transcript3277.chr16.nnic@MMP2	transcript3277.chr16.nnic	protein_coding	55479198,55479562,55482909,55484016,55485299,55485604,55488543,55489651,55491801,55493158,55496926,55498289,55502779,55505339	55479275,55479632,55483135,55484164,55485427,55485777,55488716,55489824,55491956,55493293,55497062,55498448,55502888,55506237	Gene ID= ENSG00000087245.12 TPM= 27.03 Transcript Type= NA
chr16	55802853	55833158	55802853	55833158	-	ENST00000360526.7@CES1	ENST00000360526.7	protein_coding	55833004,55828767,55826151,55823550,55821368,55820372,55819535,55816924,55812903,55810927,55810517,55806333,55803529,55802853	55833158,55828974,55826295,55823683,55821521,55820479,55819639,55816962,55813043,55811010,55810664,55806464,55803601,55803232	Gene ID= ENSG00000198848.12 TPM= 10.62 Transcript Type= protein_coding
chr16	56361452	56425538	56361452	56425538	-	ENST00000290649.9@AMFR	ENST00000290649.9	protein_coding	56425073,56414252,56409424,56407964,56405204,56404909,56402985,56401733,56389185,56385919,56369193,56367444,56363921,56361452	56425538,56414344,56409588,56408116,56405244,56405041,56403118,56401843,56389375,56386022,56369327,56367527,56364105,56363056	Gene ID= ENSG00000159461.14 TPM= 305.52 Transcript Type= protein_coding
chr16	56362023	56364116	56362023	56364116	-	ENST00000568325.1@AMFR	ENST00000568325.1	protein_coding	56363921,56362023	56364116,56363056	Gene ID= ENSG00000159461.14 TPM= 3.86 Transcript Type= retained_intron
chr16	56429133	56451375	56429133	56451375	-	ENST00000300291.9@NUDT21	ENST00000300291.9	protein_coding	56451087,56447789,56446626,56439657,56434754,56434331,56429133	56451375,56447989,56446689,56439746,56434829,56434445,56432733	Gene ID= ENSG00000167005.13 TPM= 48.27 Transcript Type= protein_coding
chr16	56451490	56479100	56451490	56479100	+	ENST00000566157.5@OGFOD1	ENST00000566157.5	protein_coding	56451490,56453263,56458548,56462534,56466152,56466876,56467165,56467905,56470003,56470487,56474828,56475507,56476044	56451766,56453408,56458594,56462634,56466268,56466967,56467293,56468018,56470082,56470791,56474950,56475565,56479100	Gene ID= ENSG00000087263.16 TPM= 7.24 Transcript Type= protein_coding
chr16	56451524	56477129	56451524	56477129	+	ENST00000336111.9@OGFOD1	ENST00000336111.9	protein_coding	56451524,56453263,56458548,56462534,56466152,56466876,56467165,56467905,56470003,56470487,56474828,56475507,56476044	56451567,56453380,56458594,56462634,56466268,56466967,56467293,56468018,56470082,56470791,56474950,56475565,56477129	Gene ID= ENSG00000087263.16 TPM= 6.27 Transcript Type= nonsense_mediated_decay
chr16	56470403	56520064	56470403	56520064	-	transcript3307.chr16.nic@BBS2	transcript3307.chr16.nic	protein_coding	56519746,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56498437,56497743,56496967,56485590,56484761,56470403	56520064,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56498568,56497880,56497079,56485738,56484867,56470614	Gene ID= ENSG00000125124.11 TPM= 9.65 Transcript Type= NA
chr16	56484385	56519988	56484385	56519988	-	transcript3308.chr16.nnic@BBS2	transcript3308.chr16.nnic	protein_coding	56519746,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56498437,56497743,56496967,56492524,56485590,56484385	56519988,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56498568,56497880,56497079,56492582,56485738,56484867	Gene ID= ENSG00000125124.11 TPM= 2.9 Transcript Type= NA
chr16	56484385	56520283	56484385	56520283	-	ENST00000245157.9@BBS2	ENST00000245157.9	protein_coding	56519746,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56498437,56497743,56496967,56485590,56484385	56520283,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56498568,56497880,56497079,56485738,56484867	Gene ID= ENSG00000125124.11 TPM= 34.27 Transcript Type= protein_coding
chr16	56484385	56520049	56484385	56520049	-	transcript3312.chr16.nic@BBS2	transcript3312.chr16.nic	protein_coding	56519957,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56498437,56497743,56496967,56485590,56484385	56520049,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56498568,56497880,56497079,56485738,56484867	Gene ID= ENSG00000125124.11 TPM= 3.38 Transcript Type= NA
chr16	56499037	56519998	56499037	56519998	-	transcript3328.chr16.nnic@BBS2	transcript3328.chr16.nnic	protein_coding	56519746,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56499037	56519998,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56499509	Gene ID= ENSG00000125124.11 TPM= 1.93 Transcript Type= NA
chr16	56608199	56609497	56608199	56609497	+	ENST00000245185.5@MT2A	ENST00000245185.5	protein_coding	56608199,56608992,56609263	56608683,56609057,56609497	Gene ID= ENSG00000125148.6 TPM= 1247.66 Transcript Type= protein_coding
chr16	56608595	56609497	56608595	56609497	+	ENST00000562017.1@MT2A	ENST00000562017.1	protein_coding	56608595	56609497	Gene ID= ENSG00000125148.6 TPM= 1.93 Transcript Type= retained_intron
chr16	56608606	56609494	56608606	56609494	+	ENST00000561491.1@MT2A	ENST00000561491.1	protein_coding	56608606,56608992	56608683,56609494	Gene ID= ENSG00000125148.6 TPM= 29.44 Transcript Type= protein_coding
chr16	56608584	56609476	56608584	56609476	+	ENST00000563985.1@MT2A	ENST00000563985.1	protein_coding	56608584,56609263	56609057,56609476	Gene ID= ENSG00000125148.6 TPM= 4.83 Transcript Type= processed_transcript
chr16	56608690	56609497	56608690	56609497	+	ENST00000567300.1@MT2A	ENST00000567300.1	protein_coding	56608690,56608992,56609263	56608804,56609057,56609497	Gene ID= ENSG00000125148.6 TPM= 34.75 Transcript Type= processed_transcript
chr16	56626276	56627112	56626276	56627112	+	transcript3350.chr16.nic@MT1E	transcript3350.chr16.nic	protein_coding	56626276,56626880	56626531,56627112	Gene ID= ENSG00000169715.14 TPM= 12.07 Transcript Type= NA
chr16	56632233	56633986	56632233	56633986	+	ENST00000379818.3@MT1M	ENST00000379818.3	protein_coding	56632233,56633340,56633751	56632759,56633405,56633986	Gene ID= ENSG00000205364.3 TPM= 20.27 Transcript Type= protein_coding
chr16	56638666	56640087	56638666	56640087	+	ENST00000290705.12@MT1A	ENST00000290705.12	protein_coding	56638666,56639264,56639859	56638766,56639329,56640087	Gene ID= ENSG00000205362.11 TPM= 3.38 Transcript Type= protein_coding
chr16	56657694	56659303	56657694	56659303	+	ENST00000334350.6@MT1F	ENST00000334350.6	protein_coding	56657694,56658675,56659073	56658086,56658740,56659303	Gene ID= ENSG00000198417.6 TPM= 1.93 Transcript Type= protein_coding
chr16	56682470	56684196	56682470	56684196	+	ENST00000568370.1@MT1X	ENST00000568370.1	protein_coding	56682470	56684196	Gene ID= ENSG00000187193.8 TPM= 22.2 Transcript Type= retained_intron
chr16	56682424	56684196	56682424	56684196	+	ENST00000394485.4@MT1X	ENST00000394485.4	protein_coding	56682424,56683165,56683958	56682568,56683230,56684196	Gene ID= ENSG00000187193.8 TPM= 906.43 Transcript Type= protein_coding
chr16	56682481	56684196	56682481	56684196	+	ENST00000564974.1@MT1X	ENST00000564974.1	protein_coding	56682481,56683165,56683958	56682568,56683386,56684196	Gene ID= ENSG00000187193.8 TPM= 12.55 Transcript Type= nonsense_mediated_decay
chr16	56730099	56844764	56730099	56844764	+	transcript3356.chr16.nnic@NUP93	transcript3356.chr16.nnic	protein_coding	56730099,56748234,56758538,56798476,56805504,56818664,56821504,56823707,56828977,56830528,56831842,56832295,56833215,56834128,56834370,56834734,56836601,56837608,56838952,56841705,56844499	56730211,56748426,56758655,56798538,56805632,56818738,56821593,56823846,56829109,56830685,56832007,56832388,56833406,56834254,56834442,56834778,56836717,56837726,56839069,56841833,56844764	Gene ID= ENSG00000102900.12 TPM= 2.41 Transcript Type= NA
chr16	56730105	56844769	56730105	56844769	+	ENST00000308159.9@NUP93	ENST00000308159.9	protein_coding	56730105,56748234,56758538,56798476,56805504,56818664,56821504,56823707,56828977,56830528,56831842,56832295,56833215,56834128,56834370,56834734,56836601,56837608,56838952,56839521,56841705,56844499	56730211,56748426,56758655,56798538,56805632,56818738,56821593,56823846,56829109,56830685,56832007,56832388,56833406,56834254,56834442,56834778,56836717,56837726,56839069,56839604,56841833,56844769	Gene ID= ENSG00000102900.12 TPM= 39.1 Transcript Type= protein_coding
chr16	56932048	56944863	56932048	56944863	+	ENST00000439977.6@HERPUD1	ENST00000439977.6	protein_coding	56932048,56935235,56935401,56936687,56939237,56939895,56942132,56943126	56932391,56935312,56935475,56936817,56939359,56940245,56942237,56944863	Gene ID= ENSG00000051108.14 TPM= 151.55 Transcript Type= protein_coding
chr16	56932147	56943881	56932147	56943881	+	ENST00000300302.9@HERPUD1	ENST00000300302.9	protein_coding	56932147,56935235,56935404,56936687,56939237,56939895,56942132,56943126	56932391,56935312,56935475,56936817,56939359,56940245,56942237,56943881	Gene ID= ENSG00000051108.14 TPM= 153.48 Transcript Type= protein_coding
chr16	56932160	56943886	56932160	56943886	+	ENST00000379792.6@HERPUD1	ENST00000379792.6	protein_coding	56932160,56935235,56936687,56939237,56939895,56942132,56943126	56932391,56935312,56936817,56939359,56940245,56942237,56943886	Gene ID= ENSG00000051108.14 TPM= 8.69 Transcript Type= protein_coding
chr16	57092549	57147964	57092549	57147964	+	transcript3368.chr16.nic@CPNE2	transcript3368.chr16.nic	protein_coding	57092549,57110708,57113288,57115476,57117496,57119195,57119561,57121093,57121674,57123414,57125860,57127849,57134775,57146085,57147551	57092790,57110922,57113467,57115550,57117567,57119278,57119650,57121191,57121760,57123473,57125993,57127903,57134826,57146321,57147964	Gene ID= ENSG00000140848.16 TPM= 3.86 Transcript Type= NA
chr16	57140896	57144586	57140896	57144586	-	ENST00000623921.1@AC009090.4	ENST00000623921.1	TEC	57140896	57144586	Gene ID= ENSG00000279019.1 TPM= 2.9 Transcript Type= TEC
chr16	57152466	57186064	57152466	57186064	-	ENST00000309137.12@FAM192A	ENST00000309137.12	protein_coding	57185821,57173728,57172776,57172251,57167093,57164001,57152466	57186064,57173869,57172874,57172372,57167226,57164065,57154507	Gene ID= ENSG00000172775.16 TPM= 19.31 Transcript Type= protein_coding
chr16	57153533	57186064	57153533	57186064	-	transcript3377.chr16.nic@FAM192A	transcript3377.chr16.nic	protein_coding	57186031,57173728,57172776,57172251,57167093,57164001,57153533	57186064,57173869,57172874,57172372,57167226,57164065,57154507	Gene ID= ENSG00000172775.16 TPM= 3.86 Transcript Type= NA
chr16	57186286	57240475	57186286	57240475	+	transcript3388.chr16.nic@RSPRY1	transcript3388.chr16.nic	protein_coding	57186286,57204504,57208058,57209075,57212972,57213888,57216107,57216904,57220732,57221272,57227342,57230711,57231167,57235124,57238879	57186785,57205008,57208110,57209187,57213098,57213946,57216173,57217035,57220847,57221415,57227453,57230813,57231319,57235228,57240475	Gene ID= ENSG00000159579.13 TPM= 4.34 Transcript Type= NA
chr16	57186291	57240475	57186291	57240475	+	ENST00000394420.8@RSPRY1	ENST00000394420.8	protein_coding	57186291,57204504,57208058,57209075,57212972,57213888,57216107,57216904,57220732,57221272,57227342,57230711,57231167,57235124,57238879	57186451,57205008,57208110,57209187,57213098,57213946,57216173,57217035,57220847,57221415,57227453,57230813,57231319,57235228,57240475	Gene ID= ENSG00000159579.13 TPM= 28.48 Transcript Type= protein_coding
chr16	57245098	57253635	57245098	57253635	+	ENST00000219204.7@ARL2BP	ENST00000219204.7	protein_coding	57245098,57246080,57248537,57249767,57250411,57252166	57245405,57246141,57248643,57249852,57250507,57253635	Gene ID= ENSG00000102931.7 TPM= 50.2 Transcript Type= protein_coding
chr16	57256097	57284687	57256097	57284687	-	ENST00000219207.9@PLLP	ENST00000219207.9	protein_coding	57284406,57261897,57258462,57256097	57284687,57262070,57258584,57257029	Gene ID= ENSG00000102934.9 TPM= 3.86 Transcript Type= protein_coding
chr16	57428169	57447528	57428169	57447528	-	ENST00000394391.8@CIAPIN1	ENST00000394391.8	protein_coding	57447342,57440772,57439182,57436656,57434044,57432487,57431151,57430258,57428169	57447528,57440983,57439334,57436732,57434212,57432560,57431266,57430339,57429280	Gene ID= ENSG00000005194.14 TPM= 29.44 Transcript Type= protein_coding
chr16	57428554	57447433	57428554	57447433	-	transcript3407.chr16.nic@CIAPIN1	transcript3407.chr16.nic	protein_coding	57447342,57440772,57439182,57436656,57434044,57432487,57431151,57430258,57428554	57447433,57440983,57439334,57436732,57434212,57432560,57431470,57430339,57429280	Gene ID= ENSG00000005194.14 TPM= 3.38 Transcript Type= NA
chr16	57428187	57447419	57428187	57447419	-	ENST00000567518.5@CIAPIN1	ENST00000567518.5	protein_coding	57447342,57440772,57439182,57436656,57434044,57432487,57431151,57430258,57428187	57447419,57440983,57439295,57436732,57434212,57432560,57431266,57430339,57429280	Gene ID= ENSG00000005194.14 TPM= 8.69 Transcript Type= protein_coding
chr16	57447437	57461275	57447437	57461275	+	ENST00000262507.10@COQ9	ENST00000262507.10	protein_coding	57447437,57451040,57452801,57456504,57456931,57458246,57459565,57460051,57460589	57447578,57451208,57452936,57456646,57457015,57458350,57459720,57460104,57461275	Gene ID= ENSG00000088682.13 TPM= 457.49 Transcript Type= protein_coding
chr16	57447494	57461242	57447494	57461242	+	ENST00000567072.5@COQ9	ENST00000567072.5	protein_coding	57447494,57451040,57452801,57456504,57458246,57459565,57460051,57460589	57447578,57451208,57452936,57456626,57458350,57459720,57460104,57461242	Gene ID= ENSG00000088682.13 TPM= 4.03 Transcript Type= protein_coding
chr16	57512178	57536599	57512178	57536599	-	ENST00000258214.2@CCDC102A	ENST00000258214.2	protein_coding	57536500,57528593,57525901,57521068,57518625,57518068,57516293,57515341,57512178	57536599,57529324,57526127,57521176,57518741,57518277,57516463,57515444,57512870	Gene ID= ENSG00000135736.5 TPM= 2.9 Transcript Type= protein_coding
chr16	57628605	57665025	57628605	57665025	+	ENST00000562558.5@ADGRG1	ENST00000562558.5	protein_coding	57628605,57641591,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452	57628802,57641708,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665025	Gene ID= ENSG00000205336.11 TPM= 5.31 Transcript Type= protein_coding
chr16	57628306	57665028	57628306	57665028	+	ENST00000562631.5@ADGRG1	ENST00000562631.5	protein_coding	57628306,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452	57628802,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665028	Gene ID= ENSG00000205336.11 TPM= 6.27 Transcript Type= protein_coding
chr16	57735730	57757250	57735730	57757250	+	transcript3464.chr16.nic@KATNB1	transcript3464.chr16.nic	protein_coding	57735730,57736978,57741687,57744394,57750827,57751261,57751641,57751940,57752530,57752778,57753077,57753389,57753945,57754930,57755119,57755345,57755790,57755992,57756356,57756814	57735855,57737283,57741817,57744511,57750927,57751302,57751724,57752055,57752601,57752928,57753267,57753519,57753995,57754997,57755238,57755494,57755917,57756066,57756472,57757250	Gene ID= ENSG00000140854.12 TPM= 8.21 Transcript Type= NA
chr16	57735730	57757250	57735730	57757250	+	ENST00000379661.7@KATNB1	ENST00000379661.7	protein_coding	57735730,57736978,57741687,57744394,57750827,57751261,57751641,57751940,57752530,57752778,57753077,57753389,57753945,57754930,57755119,57755345,57755841,57755992,57756356,57756814	57735855,57737283,57741817,57744511,57750927,57751302,57751724,57752055,57752601,57752928,57753267,57753519,57753995,57754997,57755238,57755494,57755917,57756066,57756472,57757250	Gene ID= ENSG00000140854.12 TPM= 22.68 Transcript Type= protein_coding
chr16	57758217	57802487	57758217	57802487	-	transcript3467.chr16.nic@KIFC3	transcript3467.chr16.nic	protein_coding	57802370,57798072,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758217	57802487,57798282,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 3.54 Transcript Type= NA
chr16	57758217	57802581	57758217	57802581	-	transcript3468.chr16.nnic@KIFC3	transcript3468.chr16.nnic	protein_coding	57802370,57798072,57794999,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57759728,57759125,57758217	57802581,57798282,57795141,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 4.51 Transcript Type= NA
chr16	57758219	57802513	57758219	57802513	-	ENST00000445690.6@KIFC3	ENST00000445690.6	protein_coding	57802370,57798072,57794999,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758219	57802513,57798282,57795141,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 13.2 Transcript Type= protein_coding
chr16	58001373	58021618	58001373	58021618	+	ENST00000219281.7@USB1	ENST00000219281.7	protein_coding	58001373,58002479,58009929,58014273,58017334,58018972,58020141	58001581,58002645,58010112,58014326,58017439,58019055,58021618	Gene ID= ENSG00000103005.11 TPM= 23.17 Transcript Type= protein_coding
chr16	58113588	58129450	58113588	58129450	-	ENST00000262498.7@CFAP20	ENST00000262498.7	protein_coding	58129032,58116872,58116041,58115269,58114810,58113588	58129450,58116951,58116152,58115457,58114920,58114030	Gene ID= ENSG00000070761.7 TPM= 8.69 Transcript Type= protein_coding
chr16	58159551	58198097	58159551	58198097	-	transcript3485.chr16.nic@CSNK2A2	transcript3485.chr16.nic	protein_coding	58197633,58196733,58186755,58184260,58174451,58168610,58167685,58167207,58166584,58165560,58159551	58198097,58196844,58186856,58184310,58174510,58168693,58167795,58167308,58166684,58165708,58164147	Gene ID= ENSG00000070770.8 TPM= 77.22 Transcript Type= NA
chr16	58157907	58197920	58157907	58197920	-	ENST00000262506.7@CSNK2A2	ENST00000262506.7	protein_coding	58197633,58196733,58186755,58184260,58174451,58168610,58167685,58167207,58166584,58165560,58164054,58157907	58197920,58196844,58186856,58184310,58174510,58168693,58167795,58167308,58166684,58165708,58164147,58158353	Gene ID= ENSG00000070770.8 TPM= 14.48 Transcript Type= protein_coding
chr16	58249936	58283836	58249936	58283836	+	ENST00000219299.8@CCDC113	ENST00000219299.8	protein_coding	58249936,58252727,58253998,58258368,58259854,58262385,58267479,58278482,58279691	58250115,58252853,58254159,58258523,58259934,58262540,58267586,58278637,58283836	Gene ID= ENSG00000103021.9 TPM= 10.62 Transcript Type= protein_coding
chr16	58392394	58406144	58392394	58406144	+	ENST00000318129.5@GINS3	ENST00000318129.5	protein_coding	58392394,58403098,58404499	58392787,58403331,58406144	Gene ID= ENSG00000181938.13 TPM= 1.93 Transcript Type= protein_coding
chr16	58463665	58513628	58463665	58513628	+	ENST00000258187.9@NDRG4	ENST00000258187.9	protein_coding	58463665,58487756,58494964,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422	58463797,58487850,58495008,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513628	Gene ID= ENSG00000103034.14 TPM= 1.93 Transcript Type= protein_coding
chr16	58464024	58513619	58464024	58513619	+	ENST00000394282.8@NDRG4	ENST00000394282.8	protein_coding	58464024,58487756,58494964,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422	58464467,58487850,58495008,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513619	Gene ID= ENSG00000103034.14 TPM= 2.9 Transcript Type= protein_coding
chr16	58514879	58516131	58514879	58516131	-	transcript3539.chr16.nnic@NA	transcript3539.chr16.nnic	NA	58514879	58516131	Gene ID= novel_gene_chr16_3540 TPM= 2.9 Transcript Type= NA
chr16	58515468	58519110	58515468	58519110	+	transcript3513.chr16.nic@SETD6	transcript3513.chr16.nic	protein_coding	58515468,58515791,58515953,58516202,58516478,58516808,58518181,58518401,58518724	58515564,58515880,58516097,58516343,58516672,58516928,58518231,58518543,58519110	Gene ID= ENSG00000103037.11 TPM= 1.93 Transcript Type= NA
chr16	58515468	58520527	58515468	58520527	+	transcript3521.chr16.nic@SETD6	transcript3521.chr16.nic	protein_coding	58515468,58515791,58516202,58516478,58516808,58518020,58518401,58518724	58515564,58516097,58516343,58516672,58516928,58518231,58518543,58520527	Gene ID= ENSG00000103037.11 TPM= 1.93 Transcript Type= NA
chr16	58515468	58519515	58515468	58519515	+	transcript3527.chr16.nic@SETD6	transcript3527.chr16.nic	protein_coding	58515468,58515791,58516202,58516478,58516808,58518181,58518401,58518724	58515564,58516097,58516343,58516672,58516928,58518231,58518543,58519515	Gene ID= ENSG00000103037.11 TPM= 1.93 Transcript Type= NA
chr16	58515488	58519110	58515488	58519110	+	ENST00000219315.8@SETD6	ENST00000219315.8	protein_coding	58515488,58515791,58516202,58516478,58516808,58518051,58518401,58518724	58515564,58516097,58516343,58516672,58516928,58518231,58518543,58519110	Gene ID= ENSG00000103037.11 TPM= 14.48 Transcript Type= protein_coding
chr16	58515479	58519662	58515479	58519662	+	ENST00000310682.6@SETD6	ENST00000310682.6	protein_coding	58515479,58515791,58515953,58516202,58516478,58516808,58518051,58518401,58518724	58515564,58515880,58516097,58516343,58516672,58516928,58518231,58518543,58519662	Gene ID= ENSG00000103037.11 TPM= 6.76 Transcript Type= protein_coding
chr16	58519951	58629886	58519951	58629886	-	ENST00000317147.9@CNOT1	ENST00000317147.9	protein_coding	58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556847,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543607,58542428,58542231,58541501,58539768,58538772,58538158,58537891,58536989,58534147,58532232,58531958,58530246,58528475,58525989,58525179,58523370,58521183,58519951	58629886,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903,58542568,58542335,58541620,58539959,58538914,58538266,58538060,58537220,58534395,58532395,58532075,58530347,58528648,58526138,58525359,58523502,58521317,58521036	Gene ID= ENSG00000125107.17 TPM= 3.86 Transcript Type= protein_coding
chr16	58623243	58629837	58623243	58629837	-	transcript3538.chr16.nic@CNOT1	transcript3538.chr16.nic	protein_coding	58629728,58624653,58623243	58629837,58624794,58623409	Gene ID= ENSG00000125107.17 TPM= 1.93 Transcript Type= NA
chr16	58520695	58629834	58520695	58629834	-	ENST00000569240.5@CNOT1	ENST00000569240.5	protein_coding	58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556862,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543607,58542428,58542231,58541501,58539768,58538772,58538158,58537891,58536989,58534147,58532232,58531958,58530246,58528475,58525989,58525179,58523370,58521183,58520695	58629834,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903,58542568,58542335,58541620,58539959,58538914,58538266,58538060,58537220,58534395,58532395,58532075,58530347,58528648,58526138,58525359,58523502,58521317,58521036	Gene ID= ENSG00000125107.17 TPM= 9.65 Transcript Type= protein_coding
chr16	58666372	58684770	58666372	58684770	-	transcript3542.chr16.nic@SLC38A7	transcript3542.chr16.nic	protein_coding	58684717,58683955,58679857,58678696,58678333,58677326,58676289,58675940,58672096,58671045,58670113,58666372	58684770,58684083,58680241,58678894,58678474,58677424,58676346,58676054,58672243,58671244,58670167,58667487	Gene ID= ENSG00000103042.8 TPM= 2.9 Transcript Type= NA
chr16	58665109	58685104	58665109	58685104	-	ENST00000219320.8@SLC38A7	ENST00000219320.8	protein_coding	58684717,58683955,58679857,58678696,58678333,58677326,58676289,58675940,58672096,58671045,58670113,58665109	58685104,58684178,58680241,58678894,58678474,58677424,58676346,58676054,58672243,58671244,58670167,58667487	Gene ID= ENSG00000103042.8 TPM= 17.38 Transcript Type= protein_coding
chr16	58707131	58734357	58707131	58734357	-	ENST00000245206.9@GOT2	ENST00000245206.9	protein_coding	58734140,58723746,58722150,58719196,58718527,58718196,58716663,58716014,58709417,58707131	58734357,58723902,58722278,58719255,58718688,58718300,58716813,58716179,58709567,58708293	Gene ID= ENSG00000125166.12 TPM= 729.29 Transcript Type= protein_coding
chr16	61055399	61055964	61055399	61055964	-	ENST00000591758.1@RPS27AP16	ENST00000591758.1	transcribed_processed_pseudogene	61055399	61055964	Gene ID= ENSG00000224631.4 TPM= 549.26 Transcript Type= processed_transcript
chr16	66366630	66404786	66366630	66404786	+	ENST00000341529.7@CDH5	ENST00000341529.7	protein_coding	66366630,66379319,66386809,66388324,66389358,66390403,66392136,66396059,66397982,66398456,66400771,66402652	66366758,66379547,66387097,66388440,66389522,66390590,66392383,66396201,66398106,66398561,66401016,66404786	Gene ID= ENSG00000179776.17 TPM= 17.38 Transcript Type= protein_coding
chr16	66510747	66550213	66510747	66550213	-	ENST00000567357.5@TK2	ENST00000567357.5	protein_coding	66549938,66548978,66547971,66541879,66536964,66531380,66528994,66517789,66517136,66513731,66510747	66550213,66549009,66548065,66541953,66537017,66531469,66529067,66517877,66517215,66513811,66512066	Gene ID= ENSG00000166548.15 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr16	66552567	66566072	66552567	66566072	+	ENST00000264001.8@CKLF	ENST00000264001.8	protein_coding	66552567,66558190,66563122,66565886	66552793,66558348,66563217,66566072	Gene ID= ENSG00000217555.12 TPM= 1.45 Transcript Type= protein_coding
chr16	66552569	66566072	66552569	66566072	+	ENST00000351137.8@CKLF	ENST00000351137.8	protein_coding	66552569,66563122,66565886	66552793,66563217,66566072	Gene ID= ENSG00000217555.12 TPM= 4.34 Transcript Type= protein_coding
chr16	66604664	66613880	66604664	66613880	+	ENST00000567572.5@CMTM3	ENST00000567572.5	protein_coding	66604664,66608309,66609435,66609883,66612609	66604952,66608464,66609530,66610003,66613880	Gene ID= ENSG00000140931.19 TPM= 8.69 Transcript Type= protein_coding
chr16	66732443	66751854	66732443	66751854	-	transcript3585.chr16.nic@DYNC1LI2	transcript3585.chr16.nic	protein_coding	66751485,66751273,66749197,66742438,66736075,66734218,66732443	66751854,66751346,66749313,66742668,66736244,66734311,66732474	Gene ID= ENSG00000135720.12 TPM= 5.79 Transcript Type= NA
chr16	66720893	66751798	66720893	66751798	-	ENST00000258198.6@DYNC1LI2	ENST00000258198.6	protein_coding	66751485,66751273,66749197,66742438,66736075,66734218,66732339,66730112,66729040,66728201,66727688,66725828,66720893	66751798,66751346,66749313,66742668,66736244,66734311,66732474,66730223,66729099,66728242,66727805,66725944,66723822	Gene ID= ENSG00000135720.12 TPM= 22.2 Transcript Type= protein_coding
chr16	66802878	66830976	66802878	66830976	-	transcript3589.chr16.nnic@NAE1	transcript3589.chr16.nnic	protein_coding	66830847,66826677,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66805514,66802878	66830976,66826780,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66805628,66803118	Gene ID= ENSG00000159593.14 TPM= 1.93 Transcript Type= NA
chr16	66802880	66830976	66802880	66830976	-	ENST00000379463.6@NAE1	ENST00000379463.6	protein_coding	66830847,66827980,66826677,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802880	66830976,66828077,66826780,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118	Gene ID= ENSG00000159593.14 TPM= 5.31 Transcript Type= protein_coding
chr16	66802875	66830997	66802875	66830997	-	ENST00000290810.7@NAE1	ENST00000290810.7	protein_coding	66830847,66826677,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802875	66830997,66826780,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118	Gene ID= ENSG00000159593.14 TPM= 53.57 Transcript Type= protein_coding
chr16	66802912	66830955	66802912	66830955	-	ENST00000394074.6@NAE1	ENST00000394074.6	protein_coding	66830847,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802912	66830955,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118	Gene ID= ENSG00000159593.14 TPM= 2.9 Transcript Type= protein_coding
chr16	66880361	66891096	66880361	66891096	+	ENST00000311765.3@PDP2	ENST00000311765.3	protein_coding	66880361,66884231	66880640,66891096	Gene ID= ENSG00000172840.6 TPM= 1.93 Transcript Type= protein_coding
chr16	66921685	66925644	66921685	66925644	-	ENST00000299759.10@RRAD	ENST00000299759.10	protein_coding	66925409,66924810,66923846,66923516,66921685	66925644,66925194,66923919,66923720,66922353	Gene ID= ENSG00000166592.11 TPM= 2114.57 Transcript Type= protein_coding
chr16	66932055	66934400	66932055	66934400	-	ENST00000422424.6@FAM96B	ENST00000422424.6	protein_coding	66934223,66933987,66933614,66932780,66932055	66934400,66934066,66933739,66932825,66932300	Gene ID= ENSG00000166595.11 TPM= 240.36 Transcript Type= protein_coding
chr16	66932059	66934380	66932059	66934380	-	transcript3662.chr16.nnic@NA	transcript3662.chr16.nnic	NA	66932059	66934380	Gene ID= novel_gene_chr16_3663 TPM= 1.93 Transcript Type= NA
chr16	66934444	66945069	66934444	66945069	+	ENST00000417689.5@CES2	ENST00000417689.5	protein_coding	66934444,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839	66935711,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942737,66943371,66945069	Gene ID= ENSG00000172831.11 TPM= 2.04 Transcript Type= protein_coding
chr16	66934471	66944306	66934471	66944306	+	ENST00000568470.5@CES2	ENST00000568470.5	protein_coding	66934471,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839	66935976,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942785,66943371,66944306	Gene ID= ENSG00000172831.11 TPM= 25.2 Transcript Type= nonsense_mediated_decay
chr16	66934460	66945096	66934460	66945096	+	ENST00000317091.8@CES2	ENST00000317091.8	protein_coding	66934460,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839	66935711,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942785,66943371,66945096	Gene ID= ENSG00000172831.11 TPM= 8.79 Transcript Type= protein_coding
chr16	66948843	66975148	66948843	66975148	+	transcript3664.chr16.nnic@CES3	transcript3664.chr16.nnic	protein_coding	66948843,66960678,66963179,66963491,66963802,66964357,66964623,66966244,66966725,66969679,66971172,66972356,66972668,66972854	66949044,66960769,66963383,66963629,66963935,66964510,66964727,66966345,66966865,66969759,66971319,66972505,66972746,66975148	Gene ID= ENSG00000172828.12 TPM= 5.79 Transcript Type= NA
chr16	66988581	67009735	66988581	67009735	+	transcript3666.chr16.nic@CES4A	transcript3666.chr16.nic	protein_coding	66988581,66995628,66996060,67000638,67000857,67001308,67003070,67003256,67003515,67004084,67004793,67005240,67006745,67008974	66988830,66995829,66996179,67000779,67000990,67001461,67003174,67003360,67003553,67004224,67004873,67005393,67006817,67009735	Gene ID= ENSG00000172824.14 TPM= 1.93 Transcript Type= NA
chr16	67000532	67005683	67000532	67005683	+	transcript3670.chr16.nic@CES4A	transcript3670.chr16.nic	protein_coding	67000532,67000857,67001308,67003070,67003256,67003515,67004084,67004793	67000779,67000990,67001461,67003174,67003360,67003553,67004224,67005683	Gene ID= ENSG00000172824.14 TPM= 2.9 Transcript Type= NA
chr16	67029152	67101022	67029152	67101022	+	transcript3688.chr16.nic@CBFB	transcript3688.chr16.nic	protein_coding	67029152,67029727,67066682,67082213,67098710	67029485,67029813,67066798,67082308,67101022	Gene ID= ENSG00000067955.13 TPM= 3.86 Transcript Type= NA
chr16	67029147	67101058	67029147	67101058	+	ENST00000290858.10@CBFB	ENST00000290858.10	protein_coding	67029147,67029727,67036639,67066682,67082213,67098710	67029485,67029813,67036755,67066798,67082339,67101058	Gene ID= ENSG00000067955.13 TPM= 56.95 Transcript Type= protein_coding
chr16	67029245	67101022	67029245	67101022	+	ENST00000412916.6@CBFB	ENST00000412916.6	protein_coding	67029245,67029727,67036639,67066682,67082213,67098710	67029485,67029813,67036755,67066798,67082308,67101022	Gene ID= ENSG00000067955.13 TPM= 12.55 Transcript Type= protein_coding
chr16	67109939	67148539	67109939	67148539	+	transcript3697.chr16.nic@C16orf70	transcript3697.chr16.nic	protein_coding	67109939,67110119,67120112,67125959,67131286,67132446,67132817,67134168,67134355,67139984,67140511,67144294,67144834,67145376,67145570,67146278,67147045	67110004,67110239,67120194,67126042,67131329,67132525,67132911,67134265,67134467,67140117,67140594,67144376,67144877,67145419,67145628,67146350,67148539	Gene ID= ENSG00000125149.11 TPM= 10.62 Transcript Type= NA
chr16	67109962	67148539	67109962	67148539	+	transcript3698.chr16.nic@C16orf70	transcript3698.chr16.nic	protein_coding	67109962,67110145,67120112,67125959,67131286,67132446,67132817,67134168,67134355,67139984,67140511,67144294,67144834,67145376,67145570,67146278,67147045	67109989,67110239,67120194,67126042,67131329,67132525,67132911,67134265,67134467,67140117,67140594,67144376,67144877,67145419,67145628,67146350,67148539	Gene ID= ENSG00000125149.11 TPM= 2.9 Transcript Type= NA
chr16	67154180	67160298	67154180	67160298	-	ENST00000345057.8@TRADD	ENST00000345057.8	protein_coding	67159838,67156510,67155377,67155096,67154180	67160298,67156668,67155654,67155294,67154959	Gene ID= ENSG00000102871.15 TPM= 9.65 Transcript Type= protein_coding
chr16	67159961	67164174	67159961	67164174	+	ENST00000519917.5@FBXL8	ENST00000519917.5	protein_coding	67159961,67161735,67162848,67164019	67160056,67161937,67163852,67164174	Gene ID= ENSG00000135722.8 TPM= 3.38 Transcript Type= protein_coding
chr16	67159931	67164176	67159931	67164176	+	ENST00000258200.7@FBXL8	ENST00000258200.7	protein_coding	67159931,67161735,67162848	67160056,67161937,67164176	Gene ID= ENSG00000135722.8 TPM= 8.21 Transcript Type= protein_coding
chr16	67164673	67169945	67164673	67169945	+	transcript3705.chr16.nic@HSF4	transcript3705.chr16.nic	protein_coding	67164673,67165522,67165719,67165946,67166320,67166558,67167120,67167303,67167504,67167824,67168831,67169036,67169279,67169631	67164934,67165630,67165846,67166070,67166395,67166622,67167222,67167402,67167599,67167947,67168936,67169101,67169348,67169945	Gene ID= ENSG00000102878.16 TPM= 4.95 Transcript Type= NA
chr16	67164745	67169941	67164745	67169941	+	transcript3711.chr16.nic@HSF4	transcript3711.chr16.nic	protein_coding	67164745,67165522,67165719,67165946,67166320,67166558,67167120,67167475,67167720,67168831,67169036,67169631	67164934,67165630,67165846,67166070,67166395,67166622,67167222,67167599,67167947,67168936,67169101,67169941	Gene ID= ENSG00000102878.16 TPM= 4.63 Transcript Type= NA
chr16	67164673	67169945	67164673	67169945	+	transcript3715.chr16.nic@HSF4	transcript3715.chr16.nic	protein_coding	67164673,67165522,67165719,67165946,67166558,67167120,67167475,67167720,67168831,67169036,67169279,67169631	67164934,67165630,67165846,67166395,67166622,67167222,67167599,67167947,67168936,67169101,67169348,67169945	Gene ID= ENSG00000102878.16 TPM= 5.92 Transcript Type= NA
chr16	67164673	67169945	67164673	67169945	+	transcript3717.chr16.nic@HSF4	transcript3717.chr16.nic	protein_coding	67164673,67165522,67165719,67165946,67166558,67167120,67167475,67167824,67168831,67169036,67169279,67169631	67164934,67165630,67165846,67166395,67166622,67167222,67167599,67167947,67168936,67169101,67169348,67169945	Gene ID= ENSG00000102878.16 TPM= 3.99 Transcript Type= NA
chr16	67164746	67169945	67164746	67169945	+	transcript3724.chr16.nic@HSF4	transcript3724.chr16.nic	protein_coding	67164746,67165522,67165719,67165946,67166558,67167120,67167475,67167824,67168831,67169036,67169279	67164934,67165630,67165846,67166395,67166622,67167222,67167599,67167947,67168936,67169101,67169945	Gene ID= ENSG00000102878.16 TPM= 3.67 Transcript Type= NA
chr16	67173926	67175735	67173926	67175735	+	transcript3760.chr16.nnic@NOL3	transcript3760.chr16.nnic	protein_coding	67173926,67174162,67174621,67175047	67174046,67174300,67174944,67175735	Gene ID= ENSG00000140939.14 TPM= 7 Transcript Type= NA
chr16	67172814	67175735	67172814	67175735	+	transcript3765.chr16.nic@NOL3	transcript3765.chr16.nic	protein_coding	67172814,67174162,67174621,67175047	67174046,67174464,67174944,67175735	Gene ID= ENSG00000140939.14 TPM= 62.82 Transcript Type= NA
chr16	67170497	67175735	67170497	67175735	+	ENST00000268605.11@NOL3	ENST00000268605.11	protein_coding	67170497,67174162,67174621,67175047	67170574,67174464,67174944,67175735	Gene ID= ENSG00000140939.14 TPM= 54.62 Transcript Type= protein_coding
chr16	67173951	67175199	67173951	67175199	+	ENST00000566871.5@NOL3	ENST00000566871.5	protein_coding	67173951,67174162,67174621,67175047	67174046,67174340,67174944,67175199	Gene ID= ENSG00000140939.14 TPM= 6.76 Transcript Type= protein_coding
chr16	67174002	67175735	67174002	67175735	+	ENST00000568146.1@NOL3	ENST00000568146.1	protein_coding	67174002,67174162,67174621,67175047	67174046,67174454,67174944,67175735	Gene ID= ENSG00000140939.14 TPM= 31.61 Transcript Type= protein_coding
chr16	67175604	67183952	67175604	67183952	-	ENST00000561621.5@KIAA0895L	ENST00000561621.5	protein_coding	67183262,67181558,67180041,67179815,67179430,67178199,67178010,67175604	67183952,67181697,67180666,67179958,67179562,67178504,67178097,67176975	Gene ID= ENSG00000196123.12 TPM= 1.93 Transcript Type= protein_coding
chr16	67183766	67185849	67183766	67185849	+	transcript3769.chr16.nnic@NA	transcript3769.chr16.nnic	NA	67183766	67185849	Gene ID= novel_gene_chr16_3770 TPM= 2.9 Transcript Type= NA
chr16	67184379	67190155	67184379	67190155	-	transcript3745.chr16.nic@EXOC3L1	transcript3745.chr16.nic	protein_coding	67189971,67189631,67189020,67188721,67187225,67187021,67186557,67186237,67185361,67185136,67184686,67184379	67190155,67189683,67189180,67188940,67187837,67187138,67186657,67186347,67185490,67185258,67185057,67184604	Gene ID= ENSG00000179044.15 TPM= 1.93 Transcript Type= NA
chr16	67192185	67198918	67192185	67198918	+	transcript3777.chr16.nic@E2F4	transcript3777.chr16.nic	protein_coding	67192185,67192761,67193472,67194398,67194686,67195782,67197599,67197867,67198008	67192362,67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198918	Gene ID= ENSG00000205250.8 TPM= 10.3 Transcript Type= NA
chr16	67192169	67198918	67192169	67198918	+	ENST00000379378.7@E2F4	ENST00000379378.7	protein_coding	67192169,67192761,67193009,67193472,67194398,67194686,67195782,67197599,67197867,67198008	67192362,67192870,67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198918	Gene ID= ENSG00000205250.8 TPM= 100.07 Transcript Type= protein_coding
chr16	67192185	67198917	67192185	67198917	+	ENST00000567007.5@E2F4	ENST00000567007.5	protein_coding	67192185,67193472,67194398,67194686,67195782,67197599,67197867,67198008	67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198917	Gene ID= ENSG00000205250.8 TPM= 9.33 Transcript Type= retained_intron
chr16	67227113	67229278	67227113	67229278	+	ENST00000304800.13@TMEM208	ENST00000304800.13	protein_coding	67227113,67227836,67228355,67228495,67228797,67228976	67227224,67227931,67228414,67228631,67228881,67229278	Gene ID= ENSG00000168701.18 TPM= 24.13 Transcript Type= protein_coding
chr16	67229389	67247545	67229389	67247545	-	transcript3784.chr16.nnic@FHOD1	transcript3784.chr16.nnic	protein_coding	67247210,67239348,67238903,67238380,67238202,67238034,67237657,67237475,67237239,67236966,67236557,67236411,67236016,67234357,67233657,67232039,67231637,67231430,67231188,67230601,67230314,67230066,67229793,67229389	67247545,67239454,67238967,67238447,67238307,67238128,67237768,67237569,67237382,67237114,67236733,67236434,67236069,67234472,67234267,67232194,67231819,67231549,67231349,67230791,67230506,67230228,67229990,67229718	Gene ID= ENSG00000135723.13 TPM= 86.88 Transcript Type= NA
chr16	67389809	67393535	67389809	67393535	-	ENST00000393957.6@TPPP3	ENST00000393957.6	protein_coding	67393380,67390924,67390479,67389809	67393535,67391117,67390632,67390362	Gene ID= ENSG00000159713.10 TPM= 8.69 Transcript Type= protein_coding
chr16	67394419	67416511	67394419	67416511	-	transcript3797.chr16.nic@ZDHHC1	transcript3797.chr16.nic	protein_coding	67416171,67407767,67406200,67400957,67399355,67398820,67398573,67398212,67395484,67395187,67395002,67394419	67416511,67407813,67406442,67401132,67399456,67398944,67398731,67398324,67395566,67395280,67395062,67394893	Gene ID= ENSG00000159714.10 TPM= 6.44 Transcript Type= NA
chr16	67394419	67416511	67394419	67416511	-	transcript3799.chr16.nic@ZDHHC1	transcript3799.chr16.nic	protein_coding	67416171,67407767,67406200,67400957,67399355,67398820,67398573,67398212,67395484,67395002,67394419	67416511,67407813,67406442,67401132,67399456,67398944,67398731,67398324,67395566,67395280,67394893	Gene ID= ENSG00000159714.10 TPM= 2.58 Transcript Type= NA
chr16	67394420	67416511	67394420	67416511	-	transcript3800.chr16.nic@ZDHHC1	transcript3800.chr16.nic	protein_coding	67416171,67407767,67406200,67400957,67399355,67398820,67398573,67398212,67395484,67395187,67394420	67416511,67407813,67406442,67401132,67399456,67398944,67398731,67398324,67395566,67395280,67395062	Gene ID= ENSG00000159714.10 TPM= 2.58 Transcript Type= NA
chr16	67404832	67416511	67404832	67416511	-	transcript3808.chr16.nic@ZDHHC1	transcript3808.chr16.nic	protein_coding	67416171,67407767,67404832	67416511,67407813,67406442	Gene ID= ENSG00000159714.10 TPM= 3.86 Transcript Type= NA
chr16	67413083	67415581	67413083	67415581	-	transcript3810.chr16.nnic@NA	transcript3810.chr16.nnic	NA	67413083	67415581	Gene ID= novel_gene_chr16_3811 TPM= 1.93 Transcript Type= NA
chr16	67438019	67481237	67438019	67481237	-	ENST00000290949.7@ATP6V0D1	ENST00000290949.7	protein_coding	67480957,67453544,67444528,67443099,67439274,67438971,67438793,67438019	67481237,67453715,67444706,67443178,67439351,67439147,67438870,67438689	Gene ID= ENSG00000159720.11 TPM= 189.68 Transcript Type= protein_coding
chr16	67528850	67532477	67528850	67532477	+	transcript3827.chr16.nnic@NA	transcript3827.chr16.nnic	NA	67528850	67532477	Gene ID= novel_gene_chr16_3828 TPM= 1.93 Transcript Type= NA
chr16	67533975	67542050	67533975	67542050	-	transcript3824.chr16.nnic@AC027682.5	transcript3824.chr16.nnic	antisense_RNA	67537346,67535123,67533975	67542050,67535364,67534398	Gene ID= ENSG00000261396.1 TPM= 4.83 Transcript Type= NA
chr16	67562407	67639183	67562407	67639183	+	ENST00000264010.8@CTCF	ENST00000264010.8	protein_coding	67562407,67571148,67610824,67611951,67616745,67620697,67621442,67626555,67628370,67629398,67636690,67637688	67562724,67571264,67611613,67612121,67616878,67620817,67621591,67626715,67628552,67629533,67636851,67639183	Gene ID= ENSG00000102974.14 TPM= 40.54 Transcript Type= protein_coding
chr16	67660959	67662774	67660959	67662774	+	ENST00000219255.3@PARD6A	ENST00000219255.3	protein_coding	67660959,67661455,67661893	67661101,67661677,67662774	Gene ID= ENSG00000102981.9 TPM= 18.34 Transcript Type= protein_coding
chr16	67662945	67666764	67662945	67666764	-	ENST00000243878.8@ENKD1	ENST00000243878.8	protein_coding	67666358,67666071,67664996,67663937,67663657,67663420,67662945	67666764,67666265,67665168,67664062,67663820,67663556,67663321	Gene ID= ENSG00000124074.11 TPM= 10.62 Transcript Type= protein_coding
chr16	67666816	67668758	67666816	67668758	+	ENST00000403458.8@C16orf86	ENST00000403458.8	protein_coding	67666816,67667296,67667878,67668200	67667072,67667525,67668098,67668758	Gene ID= ENSG00000159761.14 TPM= 5.15 Transcript Type= protein_coding
chr16	67666822	67668755	67666822	67668755	+	transcript3855.chr16.nic@C16orf86	transcript3855.chr16.nic	protein_coding	67666822,67667296,67667878	67667072,67667525,67668755	Gene ID= ENSG00000159761.14 TPM= 3.21 Transcript Type= NA
chr16	67666816	67668757	67666816	67668757	+	ENST00000459925.1@C16orf86	ENST00000459925.1	protein_coding	67666816,67667296	67667072,67668757	Gene ID= ENSG00000159761.14 TPM= 1.28 Transcript Type= retained_intron
chr16	67674533	67719421	67674533	67719421	-	ENST00000268797.11@GFOD2	ENST00000268797.11	protein_coding	67719163,67685457,67674533	67719421,67685802,67676053	Gene ID= ENSG00000141098.12 TPM= 24.13 Transcript Type= protein_coding
chr16	67723066	67806652	67723066	67806652	-	ENST00000317506.7@RANBP10	ENST00000317506.7	protein_coding	67806302,67805428,67772034,67744288,67738013,67734858,67731472,67729938,67729680,67729280,67728390,67727751,67727327,67723066	67806652,67805539,67772086,67744455,67738035,67735042,67731584,67730046,67729828,67729484,67728511,67727896,67727438,67726558	Gene ID= ENSG00000141084.10 TPM= 9.65 Transcript Type= protein_coding
chr16	67828157	67833926	67828157	67833926	-	transcript3869.chr16.nnic@CENPT	transcript3869.chr16.nnic	protein_coding	67833750,67832455,67832228,67832012,67831754,67831576,67831216,67830390,67830249,67829765,67829423,67828667,67828474,67828157	67833926,67832545,67832315,67832108,67831890,67831612,67831358,67830548,67830311,67830160,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 2.09 Transcript Type= NA
chr16	67828157	67847458	67828157	67847458	-	ENST00000562787.5@CENPT	ENST00000562787.5	protein_coding	67847401,67835538,67835172,67833750,67832455,67832228,67832012,67831754,67831576,67831216,67830390,67829765,67829423,67828667,67828474,67828157	67847458,67835658,67835300,67834100,67832545,67832315,67832108,67831890,67831612,67831358,67830548,67830088,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 14.64 Transcript Type= protein_coding
chr16	67828157	67833926	67828157	67833926	-	transcript3873.chr16.nic@CENPT	transcript3873.chr16.nic	protein_coding	67833750,67832455,67832228,67832012,67831754,67831576,67831216,67830390,67829765,67829423,67828667,67828474,67828157	67833926,67832545,67832315,67832136,67831890,67831612,67831358,67830548,67830088,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 2.09 Transcript Type= NA
chr16	67828157	67833926	67828157	67833926	-	transcript3874.chr16.nnic@CENPT	transcript3874.chr16.nnic	protein_coding	67833750,67832455,67832228,67832012,67831754,67831576,67831216,67830249,67829765,67829423,67828667,67828474,67828157	67833926,67832545,67832315,67832108,67831890,67831612,67831358,67830548,67830160,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 2.09 Transcript Type= NA
chr16	67828159	67833897	67828159	67833897	-	ENST00000565157.5@CENPT	ENST00000565157.5	protein_coding	67833750,67832455,67832228,67832012,67831754,67831576,67831216,67829765,67829423,67828667,67828474,67828159	67833897,67832545,67832315,67832108,67831890,67831612,67831358,67830548,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 11.27 Transcript Type= retained_intron
chr16	67828157	67833913	67828157	67833913	-	ENST00000569862.5@CENPT	ENST00000569862.5	protein_coding	67833750,67832228,67832012,67831754,67831576,67829765,67829423,67828667,67828474,67828157	67833913,67832545,67832108,67831890,67831612,67831358,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 1.61 Transcript Type= retained_intron
chr16	67842082	67844195	67842082	67844195	+	ENST00000303596.2@THAP11	ENST00000303596.2	protein_coding	67842082	67844195	Gene ID= ENSG00000168286.2 TPM= 165.07 Transcript Type= protein_coding
chr16	67847161	67871323	67847161	67871323	+	ENST00000569436.6@NUTF2	ENST00000569436.6	protein_coding	67847161,67865102,67868340,67868501,67870800	67847456,67865229,67868411,67868599,67871323	Gene ID= ENSG00000102898.11 TPM= 17.38 Transcript Type= protein_coding
chr16	67873047	67884497	67873047	67884497	+	transcript3896.chr16.nnic@EDC4	transcript3896.chr16.nnic	protein_coding	67873047,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67881954,67882212,67882429,67882679,67882958,67883568,67883956	67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880141,67880990,67881180,67881417,67881533,67881845,67882109,67882327,67882594,67882865,67883177,67883731,67884497	Gene ID= ENSG00000038358.14 TPM= 16.09 Transcript Type= NA
chr16	67873023	67884503	67873023	67884503	+	ENST00000358933.9@EDC4	ENST00000358933.9	protein_coding	67873023,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67881954,67882212,67882429,67882679,67882958,67883568,67883956	67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67881845,67882109,67882327,67882594,67882865,67883177,67883731,67884503	Gene ID= ENSG00000038358.14 TPM= 92.35 Transcript Type= protein_coding
chr16	67873047	67884497	67873047	67884497	+	transcript3900.chr16.nic@EDC4	transcript3900.chr16.nic	protein_coding	67873047,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67882212,67882429,67882679,67882958,67883568,67883956	67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67882109,67882327,67882594,67882865,67883177,67883731,67884497	Gene ID= ENSG00000038358.14 TPM= 16.57 Transcript Type= NA
chr16	67893272	67910088	67893272	67910088	+	ENST00000570631.5@PSKH1	ENST00000570631.5	protein_coding	67893272,67908680	67893371,67910088	Gene ID= ENSG00000159792.9 TPM= 1.93 Transcript Type= protein_coding
chr16	67893272	67929678	67893272	67929678	+	ENST00000291041.5@PSKH1	ENST00000291041.5	protein_coding	67893272,67908680,67927325	67893371,67909706,67929678	Gene ID= ENSG00000159792.9 TPM= 16.41 Transcript Type= protein_coding
chr16	67934502	67937087	67934502	67937087	-	ENST00000358514.8@PSMB10	ENST00000358514.8	protein_coding	67936694,67936398,67936215,67935963,67935582,67935420,67934797,67934502	67937087,67936485,67936312,67936103,67935697,67935478,67934948,67934671	Gene ID= ENSG00000205220.11 TPM= 3.86 Transcript Type= protein_coding
chr16	67934506	67935795	67934506	67935795	-	ENST00000570985.1@PSMB10	ENST00000570985.1	protein_coding	67935582,67935420,67934797,67934506	67935795,67935478,67934948,67934671	Gene ID= ENSG00000205220.11 TPM= 17.38 Transcript Type= retained_intron
chr16	67934506	67935789	67934506	67935789	-	transcript3909.chr16.nic@PSMB10	transcript3909.chr16.nic	protein_coding	67935420,67934797,67934506	67935789,67934948,67934671	Gene ID= ENSG00000205220.11 TPM= 5.79 Transcript Type= NA
chr16	67939882	67944195	67939882	67944195	-	transcript3923.chr16.nic@LCAT	transcript3923.chr16.nic	protein_coding	67943056,67942861,67942671,67942363,67940737,67939882	67944195,67942976,67942766,67942587,67940831,67940478	Gene ID= ENSG00000213398.7 TPM= 3.86 Transcript Type= NA
chr16	67943474	67968694	67943474	67968694	-	ENST00000316341.7@SLC12A4	ENST00000316341.7	protein_coding	67968439,67963465,67961575,67957898,67957742,67954643,67952184,67951823,67951140,67950962,67950654,67950319,67949800,67948061,67947669,67947331,67946937,67946438,67946171,67945951,67945764,67945369,67945087,67943474	67968694,67963559,67961706,67958044,67957796,67954773,67952425,67952037,67951304,67951060,67950711,67950493,67949918,67948159,67947788,67947435,67947105,67946633,67946340,67946082,67945871,67945553,67945220,67944931	Gene ID= ENSG00000124067.16 TPM= 30.41 Transcript Type= protein_coding
chr16	67944329	67968645	67944329	67968645	-	transcript3918.chr16.nic@SLC12A4	transcript3918.chr16.nic	protein_coding	67968439,67963465,67961575,67957898,67957742,67954643,67952184,67951823,67951140,67950319,67949800,67948061,67947669,67947331,67946937,67946171,67945951,67945764,67945369,67945087,67944329	67968645,67963559,67961706,67958044,67957796,67954773,67952425,67952037,67951304,67950493,67949918,67948159,67947788,67947435,67947105,67946340,67946082,67945871,67945553,67945220,67944931	Gene ID= ENSG00000124067.16 TPM= 6.27 Transcript Type= NA
chr16	67991372	67993944	67991372	67993944	-	transcript3928.chr16.nnic@NA	transcript3928.chr16.nnic	NA	67991372	67993944	Gene ID= novel_gene_chr16_3929 TPM= 2.9 Transcript Type= NA
chr16	68021274	68023442	68021274	68023442	-	ENST00000332395.6@DDX28	ENST00000332395.6	protein_coding	68021274	68023442	Gene ID= ENSG00000182810.6 TPM= 38.61 Transcript Type= protein_coding
chr16	68022956	68079320	68022956	68079320	+	ENST00000565263.5@DUS2	ENST00000565263.5	protein_coding	68022956,68025415,68038006,68049505,68053564,68054574,68056364,68061066,68066317,68066566,68070134,68070940,68074034,68075355,68076632,68078445,68078749	68023351,68025494,68038149,68049550,68053655,68054617,68056424,68061113,68066382,68066636,68070220,68071108,68074155,68075504,68076719,68078518,68079320	Gene ID= ENSG00000167264.17 TPM= 5.79 Transcript Type= protein_coding
chr16	68023253	68079320	68023253	68079320	+	ENST00000358896.10@DUS2	ENST00000358896.10	protein_coding	68023253,68038006,68049505,68053564,68054574,68056364,68061066,68066317,68066566,68070134,68070940,68074034,68075355,68076632,68078445,68078749	68023351,68038149,68049550,68053655,68054617,68056424,68061113,68066382,68066636,68070220,68071108,68074155,68075504,68076719,68078518,68079320	Gene ID= ENSG00000167264.17 TPM= 2.9 Transcript Type= protein_coding
chr16	68023284	68031627	68023284	68031627	+	transcript3935.chr16.nnic@DUS2	transcript3935.chr16.nnic	protein_coding	68023284,68025415,68030757	68023351,68025494,68031627	Gene ID= ENSG00000167264.17 TPM= 6.76 Transcript Type= NA
chr16	68085348	68226923	68085348	68226923	+	transcript3939.chr16.nnic@NFATC3	transcript3939.chr16.nnic	protein_coding	68085348,68121987,68126448,68157869,68166843,68174374,68181475,68183240,68190768,68214329,68221231,68226350	68085784,68123121,68126610,68158068,68167015,68174514,68181530,68183366,68191775,68214432,68221284,68226923	Gene ID= ENSG00000072736.18 TPM= 9.65 Transcript Type= NA
chr16	68085658	68192228	68085658	68192228	+	ENST00000379165.8@NFATC3	ENST00000379165.8	protein_coding	68085658,68121987,68126448,68157869,68166843,68174374,68181475,68183240,68190768	68085784,68123121,68126610,68158068,68167015,68174514,68181530,68183366,68192228	Gene ID= ENSG00000072736.18 TPM= 1.93 Transcript Type= retained_intron
chr16	68245369	68261056	68245369	68261056	+	transcript3950.chr16.nic@PLA2G15	transcript3950.chr16.nic	protein_coding	68245369,68249290,68253422,68254919,68255282,68255766,68259146	68245553,68249446,68253517,68255037,68255380,68255990,68261056	Gene ID= ENSG00000103066.12 TPM= 39.1 Transcript Type= NA
chr16	68245373	68261056	68245373	68261056	+	transcript3955.chr16.nic@PLA2G15	transcript3955.chr16.nic	protein_coding	68245373,68248569,68249290,68254919,68255282,68255891,68259146	68245553,68248692,68249446,68255037,68255380,68255990,68261056	Gene ID= ENSG00000103066.12 TPM= 11.1 Transcript Type= NA
chr16	68245344	68261062	68245344	68261062	+	ENST00000219345.9@PLA2G15	ENST00000219345.9	protein_coding	68245344,68249290,68254919,68255282,68255766,68259146	68245553,68249446,68255037,68255380,68255990,68261062	Gene ID= ENSG00000103066.12 TPM= 146.24 Transcript Type= protein_coding
chr16	68264518	68288986	68264518	68288986	+	transcript3988.chr16.nnic@SLC7A6	transcript3988.chr16.nnic	protein_coding	68264518,68266593,68273818,68274691,68284880,68287746	68264576,68266721,68273904,68275249,68285013,68288986	Gene ID= ENSG00000103064.13 TPM= 2.25 Transcript Type= NA
chr16	68264528	68288986	68264528	68288986	+	transcript3990.chr16.nnic@SLC7A6	transcript3990.chr16.nnic	protein_coding	68264528,68266593,68273795,68274691,68287323	68264576,68266721,68273904,68275249,68288986	Gene ID= ENSG00000103064.13 TPM= 1.93 Transcript Type= NA
chr16	68264528	68288986	68264528	68288986	+	transcript3994.chr16.nic@SLC7A6	transcript3994.chr16.nic	protein_coding	68264528,68266593,68273818,68274691,68287746	68264576,68266721,68273904,68275249,68288986	Gene ID= ENSG00000103064.13 TPM= 1.93 Transcript Type= NA
chr16	68264529	68288986	68264529	68288986	+	transcript3996.chr16.nnic@SLC7A6	transcript3996.chr16.nnic	protein_coding	68264529,68266593,68274691,68284880,68287746	68264576,68266721,68275249,68285013,68288986	Gene ID= ENSG00000103064.13 TPM= 2.25 Transcript Type= NA
chr16	68267940	68288986	68267940	68288986	+	transcript4000.chr16.nnic@SLC7A6	transcript4000.chr16.nnic	protein_coding	68267940,68273818,68274691,68284880,68287746	68268089,68273904,68275249,68285013,68288986	Gene ID= ENSG00000103064.13 TPM= 2.25 Transcript Type= NA
chr16	68264187	68288986	68264187	68288986	+	transcript4008.chr16.nic@SLC7A6	transcript4008.chr16.nic	protein_coding	68264187,68266593,68274691,68287746	68264576,68266721,68275249,68288986	Gene ID= ENSG00000103064.13 TPM= 2.9 Transcript Type= NA
chr16	68264530	68301819	68264530	68301819	+	ENST00000219343.10@SLC7A6	ENST00000219343.10	protein_coding	68264530,68266593,68274691,68287746,68290396,68291209,68291558,68294705,68296364,68296627,68297234	68264576,68266721,68275249,68287871,68290540,68291332,68291661,68294801,68296513,68296810,68301819	Gene ID= ENSG00000103064.13 TPM= 46.33 Transcript Type= protein_coding
chr16	68298035	68310945	68298035	68310945	-	ENST00000263997.10@SLC7A6OS	ENST00000263997.10	protein_coding	68310735,68310335,68304026,68302381,68298035	68310945,68310613,68304232,68302501,68301405	Gene ID= ENSG00000103061.12 TPM= 5.79 Transcript Type= protein_coding
chr16	68286994	68290461	68286994	68290461	-	transcript4026.chr16.nnic@NA	transcript4026.chr16.nnic	NA	68286994	68290461	Gene ID= novel_gene_chr16_4027 TPM= 6.76 Transcript Type= NA
chr16	68311001	68357259	68311001	68357259	+	transcript3967.chr16.nic@PRMT7	transcript3967.chr16.nic	protein_coding	68311001,68312042,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054	68311111,68312176,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357259	Gene ID= ENSG00000132600.16 TPM= 5.23 Transcript Type= NA
chr16	68311019	68357259	68311019	68357259	+	transcript3970.chr16.nic@PRMT7	transcript3970.chr16.nic	protein_coding	68311019,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054	68311099,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357259	Gene ID= ENSG00000132600.16 TPM= 3.3 Transcript Type= NA
chr16	68345561	68357259	68345561	68357259	+	transcript3983.chr16.nic@PRMT7	transcript3983.chr16.nic	protein_coding	68345561,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054	68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357259	Gene ID= ENSG00000132600.16 TPM= 6.44 Transcript Type= NA
chr16	68346068	68357259	68346068	68357259	+	transcript3984.chr16.nic@PRMT7	transcript3984.chr16.nic	protein_coding	68346068,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054	68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357259	Gene ID= ENSG00000132600.16 TPM= 2.58 Transcript Type= NA
chr16	68315896	68357265	68315896	68357265	+	ENST00000441236.2@PRMT7	ENST00000441236.2	protein_coding	68315896,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054	68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357265	Gene ID= ENSG00000132600.16 TPM= 1.37 Transcript Type= protein_coding
chr16	68539213	68567131	68539213	68567131	+	ENST00000570495.5@ZFP90	ENST00000570495.5	protein_coding	68539213,68539758,68557998,68558473,68563044	68539469,68539825,68558124,68558568,68567131	Gene ID= ENSG00000184939.15 TPM= 2.9 Transcript Type= protein_coding
chr16	68539316	68576040	68539316	68576040	+	ENST00000611381.4@ZFP90	ENST00000611381.4	protein_coding	68539316,68539758,68557998,68558473,68575791	68539469,68539825,68558124,68558568,68576040	Gene ID= ENSG00000184939.15 TPM= 2.9 Transcript Type= protein_coding
chr16	68843606	69085180	68843606	69085180	+	ENST00000261778.1@TANGO6	ENST00000261778.1	protein_coding	68843606,68859884,68862945,68867079,68875154,68878118,68880548,68900434,68902328,68907443,68909211,68919085,68927568,68930238,68974028,69022828,69040308,69083485	68843711,68860524,68863061,68867220,68875290,68878280,68880630,68900546,68902504,68907575,68909402,68919219,68928083,68930295,68974168,69022979,69040421,69085180	Gene ID= ENSG00000103047.7 TPM= 10.62 Transcript Type= protein_coding
chr16	69118010	69132570	69118010	69132570	-	ENST00000448552.6@CHTF8	ENST00000448552.6	protein_coding	69132484,69121436,69121053,69118010	69132570,69121493,69121170,69120649	Gene ID= ENSG00000168802.12 TPM= 10.62 Transcript Type= protein_coding
chr16	69132515	69169021	69132515	69169021	+	ENST00000314423.11@UTP4	ENST00000314423.11	protein_coding	69132515,69133458,69136696,69137801,69139825,69143178,69150537,69150813,69153584,69154393,69155871,69157084,69160356,69163083,69165341,69167075,69168821	69132689,69133618,69136887,69137885,69139914,69143389,69150708,69150904,69153680,69154457,69155993,69157240,69160462,69163178,69165526,69167185,69169021	Gene ID= ENSG00000141076.17 TPM= 154.29 Transcript Type= protein_coding
chr16	69132599	69169021	69132599	69169021	+	transcript4049.chr16.nnic@UTP4	transcript4049.chr16.nnic	protein_coding	69132599,69133458,69136696,69137801,69139825,69143178,69150537,69150813,69153584,69154393,69155871,69157084,69160356,69163083,69165341,69167075,69168882	69132689,69133618,69136887,69137885,69139914,69143389,69150708,69150904,69153680,69154457,69155993,69157240,69160462,69163178,69165526,69167123,69169021	Gene ID= ENSG00000141076.17 TPM= 15.76 Transcript Type= NA
chr16	69132596	69169020	69132596	69169020	+	ENST00000562237.5@UTP4	ENST00000562237.5	protein_coding	69132596,69133512,69136696,69137801,69139825,69143178,69150537,69150813,69153584,69154393,69155871,69157084,69160356,69163083,69165341,69167075,69168821	69132689,69133618,69136887,69137885,69139914,69143389,69150708,69150904,69153680,69154457,69155993,69157240,69160462,69163178,69165526,69167185,69169020	Gene ID= ENSG00000141076.17 TPM= 5.31 Transcript Type= protein_coding
chr16	69187122	69300981	69187122	69300981	+	transcript4065.chr16.nnic@SNTB2	transcript4065.chr16.nnic	protein_coding	69187122,69245602,69260050,69270143,69284048,69299590,69300832	69187746,69245815,69260230,69270285,69284244,69299774,69300981	Gene ID= ENSG00000168807.16 TPM= 1.93 Transcript Type= NA
chr16	69332596	69339583	69332596	69339583	-	ENST00000562081.2@COG8	ENST00000562081.2	protein_coding	69339176,69336505,69334521,69332596	69339583,69336712,69335348,69332882	Gene ID= ENSG00000213380.14 TPM= 34.75 Transcript Type= protein_coding
chr16	69326913	69339667	69326913	69339667	-	ENST00000306875.8@COG8	ENST00000306875.8	protein_coding	69339176,69336505,69334521,69332714,69330813,69326913	69339667,69336712,69335348,69332882,69331095,69329179	Gene ID= ENSG00000272617.2 TPM= 7.72 Transcript Type= protein_coding
chr16	69328621	69330595	69328621	69330595	-	ENST00000288022.1@PDF	ENST00000288022.1	protein_coding	69329997,69328621	69330595,69329179	Gene ID= ENSG00000258429.1 TPM= 19.31 Transcript Type= protein_coding
chr16	69339430	69343111	69339430	69343111	+	ENST00000254940.9@NIP7	ENST00000254940.9	protein_coding	69339430,69340006,69340194,69341180,69341533	69339885,69340092,69340332,69341320,69343111	Gene ID= ENSG00000132603.13 TPM= 4.83 Transcript Type= protein_coding
chr16	69364967	69385955	69364967	69385955	-	transcript4114.chr16.nic@TERF2	transcript4114.chr16.nic	protein_coding	69385593,69385391,69384580,69372269,69370483,69368376,69364967	69385955,69385486,69384710,69372355,69370629,69368482,69367199	Gene ID= ENSG00000132604.10 TPM= 1.93 Transcript Type= NA
chr16	69379112	69386009	69379112	69386009	-	transcript4121.chr16.nnic@TERF2	transcript4121.chr16.nnic	protein_coding	69385593,69385391,69384580,69379112	69386009,69385486,69384710,69379657	Gene ID= ENSG00000132604.10 TPM= 2.9 Transcript Type= NA
chr16	69355561	69385988	69355561	69385988	-	ENST00000254942.7@TERF2	ENST00000254942.7	protein_coding	69385593,69385391,69384580,69372269,69370483,69368376,69366807,69361404,69357518,69355561	69385988,69385486,69384710,69372355,69370629,69368482,69367199,69361489,69357561,69357056	Gene ID= ENSG00000132604.10 TPM= 18.34 Transcript Type= protein_coding
chr16	69424525	69466266	69424525	69466266	+	ENST00000512062.5@CYB5B	ENST00000512062.5	protein_coding	69424525,69447150,69448115,69459093,69462430	69424857,69447278,69448144,69459121,69466266	Gene ID= ENSG00000103018.16 TPM= 7.72 Transcript Type= protein_coding
chr16	69565987	69569338	69565987	69569338	+	transcript4139.chr16.nic@NFAT5	transcript4139.chr16.nic	protein_coding	69565987,69568495	69566374,69569338	Gene ID= ENSG00000102908.20 TPM= 2.9 Transcript Type= NA
chr16	69662595	69663508	69662595	69663508	+	transcript4141.chr16.nnic@NA	transcript4141.chr16.nnic	NA	69662595	69663508	Gene ID= novel_gene_chr16_4142 TPM= 1.93 Transcript Type= NA
chr16	69709401	69726951	69709401	69726951	-	ENST00000320623.9@NQO1	ENST00000320623.9	protein_coding	69726433,69718370,69718123,69714964,69713028,69709401	69726951,69718534,69718253,69715077,69713129,69711281	Gene ID= ENSG00000181019.12 TPM= 5.79 Transcript Type= protein_coding
chr16	69710727	69726584	69710727	69726584	-	ENST00000379046.6@NQO1	ENST00000379046.6	protein_coding	69726433,69718370,69718123,69713028,69710727	69726584,69718534,69718253,69713129,69711281	Gene ID= ENSG00000181019.12 TPM= 1.93 Transcript Type= protein_coding
chr16	69741867	69754940	69741867	69754940	-	ENST00000268802.9@NOB1	ENST00000268802.9	protein_coding	69754848,69754594,69752241,69749559,69749213,69748918,69748232,69744873,69741867	69754940,69754726,69752371,69749630,69749338,69749118,69748329,69745017,69742601	Gene ID= ENSG00000141101.12 TPM= 30.41 Transcript Type= protein_coding
chr16	69741867	69754943	69741867	69754943	-	transcript4144.chr16.nic@NOB1	transcript4144.chr16.nic	protein_coding	69754848,69754594,69752241,69749559,69749213,69748951,69748232,69744873,69741867	69754943,69754726,69752371,69749630,69749338,69749118,69748329,69745017,69742601	Gene ID= ENSG00000141101.12 TPM= 3.38 Transcript Type= NA
chr16	69762306	69941741	69762306	69941741	+	ENST00000359154.6@WWP2	ENST00000359154.6	protein_coding	69762306,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761,69917709,69925430,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841	69762391,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69908850,69917883,69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941741	Gene ID= ENSG00000198373.12 TPM= 17.38 Transcript Type= protein_coding
chr16	69924990	69941738	69924990	69941738	+	ENST00000568684.1@WWP2	ENST00000568684.1	protein_coding	69924990,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841	69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941738	Gene ID= ENSG00000198373.12 TPM= 10.14 Transcript Type= protein_coding
chr16	69762315	69910250	69762315	69910250	+	transcript4151.chr16.nic@WWP2	transcript4151.chr16.nic	protein_coding	69762315,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761	69762391,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69910250	Gene ID= ENSG00000198373.12 TPM= 2.41 Transcript Type= NA
chr16	70246778	70251930	70246778	70251930	-	ENST00000435634.2@EXOSC6	ENST00000435634.2	protein_coding	70246778	70251930	Gene ID= ENSG00000223496.2 TPM= 15.44 Transcript Type= protein_coding
chr16	70252295	70289543	70252295	70289543	-	ENST00000261772.12@AARS	ENST00000261772.12	protein_coding	70289421,70282620,70276966,70276486,70271781,70270196,70269618,70268271,70267659,70265538,70264958,70262346,70261044,70258980,70258033,70255728,70254621,70253919,70253714,70253268,70252295	70289543,70282784,70277154,70276631,70271972,70270340,70269763,70268379,70267809,70265662,70265102,70262524,70261157,70259186,70258217,70255836,70254734,70254038,70253800,70253381,70252906	Gene ID= ENSG00000090861.15 TPM= 52.13 Transcript Type= protein_coding
chr16	70299053	70335283	70299053	70335283	+	ENST00000288071.10@DDX19B	ENST00000288071.10	protein_coding	70299053,70312609,70314902,70315969,70317496,70324585,70325574,70329292,70329831,70331722,70332968,70333521	70299354,70312657,70314955,70316104,70317588,70324687,70325688,70329469,70330068,70331884,70333159,70335283	Gene ID= ENSG00000157349.16 TPM= 35.72 Transcript Type= protein_coding
chr16	70332935	70333823	70332935	70333823	+	transcript4184.chr16.nic@DDX19B	transcript4184.chr16.nic	protein_coding	70332935,70333521	70333159,70333823	Gene ID= ENSG00000157349.16 TPM= 7.72 Transcript Type= NA
chr16	70299194	70333823	70299194	70333823	+	ENST00000355992.7@DDX19B	ENST00000355992.7	protein_coding	70299194,70312609,70314902,70315969,70324585,70325574,70329292,70329831,70331722,70332968,70333521	70299354,70312657,70314955,70316104,70324687,70325688,70329469,70330068,70331884,70333159,70333823	Gene ID= ENSG00000157349.16 TPM= 8.69 Transcript Type= protein_coding
chr16	70346834	70373381	70346834	70373381	+	transcript4186.chr16.nic@DDX19A	transcript4186.chr16.nic	protein_coding	70346834,70350557,70355485,70356112,70356846,70361418,70364543,70365017,70366085,70366624,70370223,70371372,70371925	70347048,70350605,70355535,70356247,70356906,70361510,70364645,70365131,70366262,70366861,70370385,70371563,70373381	Gene ID= ENSG00000168872.16 TPM= 8.8 Transcript Type= NA
chr16	70346829	70373383	70346829	70373383	+	ENST00000302243.11@DDX19A	ENST00000302243.11	protein_coding	70346829,70350557,70355485,70356112,70361418,70364543,70365017,70366085,70366624,70370223,70371372,70371925	70347048,70350605,70355535,70356247,70361510,70364645,70365131,70366262,70366861,70370385,70371563,70373383	Gene ID= ENSG00000168872.16 TPM= 97.37 Transcript Type= protein_coding
chr16	70346883	70373381	70346883	70373381	+	ENST00000569771.5@DDX19A	ENST00000569771.5	protein_coding	70346883,70350557,70355485,70356112,70361418,70364543,70365017,70366085,70366624,70370223,70371372,70371925	70347048,70350605,70355535,70356247,70361636,70364645,70365131,70366262,70366861,70370385,70371563,70373381	Gene ID= ENSG00000168872.16 TPM= 6.23 Transcript Type= nonsense_mediated_decay
chr16	70373134	70375022	70373134	70375022	+	transcript4209.chr16.nnic@NA	transcript4209.chr16.nnic	NA	70373134	70375022	Gene ID= novel_gene_chr16_4210 TPM= 1.93 Transcript Type= NA
chr16	70454421	70480274	70454421	70480274	+	ENST00000288078.10@FUK	ENST00000288078.10	protein_coding	70454421,70463169,70463623,70465126,70466132,70466882,70467374,70467886,70468849,70469152,70470314,70470971,70471182,70472541,70472983,70474129,70474528,70474790,70475350,70475648,70478272,70478551,70479180,70479579	70454630,70463272,70463774,70465176,70466257,70466954,70467471,70467966,70468968,70469323,70470426,70471072,70471352,70472605,70473353,70474339,70474694,70475011,70475493,70475767,70478459,70478650,70479403,70480274	Gene ID= ENSG00000157353.16 TPM= 9.65 Transcript Type= protein_coding
chr16	70480569	70523565	70480569	70523565	-	ENST00000323786.9@COG4	ENST00000323786.9	protein_coding	70523373,70519649,70517626,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480569	70523565,70519731,70517740,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 145.6 Transcript Type= protein_coding
chr16	70480568	70523558	70480568	70523558	-	ENST00000564415.5@COG4	ENST00000564415.5	protein_coding	70523373,70519649,70517626,70515868,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480568	70523558,70519731,70517740,70516040,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 8.04 Transcript Type= nonsense_mediated_decay
chr16	70523788	70572164	70523788	70572164	+	transcript4231.chr16.nnic@SF3B3	transcript4231.chr16.nnic	protein_coding	70523788,70526587,70528873,70530745,70532479,70535308,70538323,70539104,70540435,70541669,70544438,70548370,70554446,70555051,70556179,70556886,70560469,70561630,70563876,70565065,70565368,70567411,70568283,70569043,70570006,70571095,70571673	70523928,70526726,70529199,70530917,70532620,70535420,70538460,70539207,70540494,70541834,70544533,70548442,70554597,70555206,70556334,70557029,70560591,70561784,70564050,70565270,70565524,70567536,70568495,70569141,70570149,70571199,70572164	Gene ID= ENSG00000189091.12 TPM= 2.58 Transcript Type= NA
chr16	70523788	70572299	70523788	70572299	+	transcript4233.chr16.nic@SF3B3	transcript4233.chr16.nic	protein_coding	70523788,70526587,70528873,70530745,70532479,70535308,70538323,70539104,70541669,70544438,70548370,70550650,70554446,70555051,70556179,70556886,70560469,70561630,70563876,70565065,70565368,70567411,70568283,70569043,70570006,70571095,70571673	70523928,70526726,70529199,70530917,70532620,70535420,70538460,70539207,70541834,70544533,70548442,70550678,70554597,70555206,70556334,70557029,70560591,70561784,70564050,70565270,70565524,70567536,70568495,70569141,70570149,70571199,70572299	Gene ID= ENSG00000189091.12 TPM= 6.44 Transcript Type= NA
chr16	70523788	70577668	70523788	70577668	+	ENST00000302516.9@SF3B3	ENST00000302516.9	protein_coding	70523788,70526587,70528873,70530745,70532479,70535308,70538323,70539104,70541669,70544438,70548370,70554446,70555051,70556179,70556886,70560469,70561630,70563876,70565065,70565368,70567411,70568283,70569043,70570006,70571095,70571673	70523928,70526726,70529199,70530917,70532620,70535420,70538460,70539207,70541834,70544533,70548442,70554597,70555206,70556334,70557029,70560591,70561784,70564050,70565270,70565524,70567536,70568495,70569141,70570149,70571199,70577668	Gene ID= ENSG00000189091.12 TPM= 18.99 Transcript Type= protein_coding
chr16	70646466	70660682	70646466	70660682	+	transcript4243.chr16.nic@IL34	transcript4243.chr16.nic	protein_coding	70646466,70654538,70656602,70656963,70659618,70659997	70646975,70654671,70656679,70657121,70659753,70660682	Gene ID= ENSG00000157368.10 TPM= 37.65 Transcript Type= NA
chr16	70663769	70686072	70663769	70686072	-	transcript4246.chr16.nic@MTSS1L	transcript4246.chr16.nic	protein_coding	70685723,70680964,70680794,70679971,70679786,70679630,70679315,70678252,70677792,70676881,70674306,70665466,70664920,70664598,70663769	70686072,70681025,70680867,70680055,70679877,70679704,70679323,70678409,70677899,70676978,70674432,70665540,70665096,70664763,70664449	Gene ID= ENSG00000132613.14 TPM= 17.38 Transcript Type= NA
chr16	70661204	70686066	70661204	70686066	-	ENST00000338779.10@MTSS1L	ENST00000338779.10	protein_coding	70685723,70680964,70680794,70679971,70679786,70679630,70679315,70678252,70677792,70676881,70674306,70665466,70664920,70664598,70661204	70686066,70681025,70680867,70680055,70679877,70679704,70679323,70678409,70677899,70676978,70674528,70665540,70665096,70664763,70664449	Gene ID= ENSG00000132613.14 TPM= 17.38 Transcript Type= protein_coding
chr16	70687441	70801160	70687441	70801160	-	ENST00000568548.5@VAC14	ENST00000568548.5	protein_coding	70800797,70785702,70784776,70784113,70783445,70783033,70781869,70780790,70772109,70762881,70762540,70744423,70731495,70698637,70697139,70695544,70692821,70687441	70801160,70785869,70784838,70784220,70783554,70783139,70782003,70780939,70772172,70763025,70762605,70744579,70731627,70698811,70697257,70695623,70692971,70688090	Gene ID= ENSG00000103043.14 TPM= 4.66 Transcript Type= nonsense_mediated_decay
chr16	70687441	70691049	70687441	70691049	-	ENST00000571759.1@VAC14	ENST00000571759.1	protein_coding	70687441	70691049	Gene ID= ENSG00000103043.14 TPM= 4.18 Transcript Type= processed_transcript
chr16	70687439	70801161	70687439	70801161	-	ENST00000261776.9@VAC14	ENST00000261776.9	protein_coding	70800797,70786215,70785702,70784776,70784113,70783445,70783033,70781869,70780790,70772109,70762881,70762540,70744423,70731495,70698637,70697139,70695544,70692821,70687439	70801161,70786365,70785869,70784838,70784220,70783554,70783139,70782003,70780939,70772172,70763025,70762605,70744579,70731627,70698811,70697257,70695623,70692971,70688090	Gene ID= ENSG00000103043.14 TPM= 25.9 Transcript Type= protein_coding
chr16	71282300	71289539	71282300	71289539	-	ENST00000434935.6@CMTR2	ENST00000434935.6	protein_coding	71289136,71288878,71282300	71289539,71288937,71285939	Gene ID= ENSG00000180917.17 TPM= 3.86 Transcript Type= protein_coding
chr16	71447597	71462250	71447597	71462250	-	transcript4260.chr16.nic@ZNF23	transcript4260.chr16.nic	protein_coding	71462210,71456764,71456072,71454042,71453243,71447597	71462250,71456828,71456121,71454218,71453350,71449885	Gene ID= ENSG00000167377.17 TPM= 2.9 Transcript Type= NA
chr16	71447600	71489311	71447600	71489311	-	ENST00000561908.1@AC010547.5	ENST00000561908.1	protein_coding	71488998,71484589,71482082,71478879,71478228,71463546,71462210,71456764,71456072,71454042,71453243,71447600	71489311,71484748,71482143,71479005,71478341,71463648,71462370,71456828,71456121,71454168,71453350,71449885	Gene ID= ENSG00000261611.5 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr16	71731883	71809084	71731883	71809084	-	transcript4270.chr16.nic@AP1G1	transcript4270.chr16.nic	protein_coding	71808763,71808015,71789279,71774468,71773221,71771156,71769623,71765489,71764646,71764350,71761512,71758808,71756019,71753833,71750210,71749894,71748251,71746588,71745473,71745144,71739234,71738942,71734609,71731883	71809084,71808150,71789482,71774592,71773362,71771252,71769699,71765584,71764726,71764448,71761567,71758921,71756159,71753887,71750332,71749983,71748378,71746692,71745614,71745270,71739341,71739102,71734707,71733159	Gene ID= ENSG00000166747.12 TPM= 3.86 Transcript Type= NA
chr16	71729000	71809201	71729000	71809201	-	ENST00000299980.8@AP1G1	ENST00000299980.8	protein_coding	71808763,71789279,71774468,71773221,71771156,71769623,71765489,71764646,71764350,71761512,71758808,71756019,71753833,71750210,71749894,71748251,71746588,71745473,71745144,71739234,71738942,71734609,71729000	71809201,71789482,71774592,71773362,71771252,71769699,71765584,71764726,71764448,71761567,71758921,71756159,71753887,71750332,71749983,71748378,71746692,71745614,71745270,71739341,71739102,71734707,71733159	Gene ID= ENSG00000166747.12 TPM= 19.31 Transcript Type= protein_coding
chr16	71845991	71857333	71845991	71857333	+	ENST00000427980.6@ATXN1L	ENST00000427980.6	protein_coding	71845991,71848010,71849624	71846104,71848071,71857333	Gene ID= ENSG00000224470.7 TPM= 33.79 Transcript Type= protein_coding
chr16	71859680	71884190	71859680	71884190	-	ENST00000425432.5@ZNF821	ENST00000425432.5	protein_coding	71883908,71883211,71879907,71867912,71864903,71864138,71861776,71859680	71884190,71883273,71880023,71868037,71865048,71864242,71861942,71860672	Gene ID= ENSG00000102984.14 TPM= 10.62 Transcript Type= protein_coding
chr16	71859680	71884190	71859680	71884190	-	ENST00000611294.4@ZNF821	ENST00000611294.4	protein_coding	71883908,71883211,71879907,71867912,71864903,71864138,71859680	71884190,71883273,71880023,71868037,71865048,71864242,71860672	Gene ID= ENSG00000102984.14 TPM= 1.93 Transcript Type= protein_coding
chr16	71895486	71929002	71895486	71929002	+	transcript4290.chr16.nnic@IST1	transcript4290.chr16.nnic	protein_coding	71895486,71915626,71916462,71917047,71918141,71920739,71921343,71922474,71923288,71924769,71927614	71895589,71915728,71916642,71917134,71918258,71920822,71921453,71922680,71923380,71924817,71929002	Gene ID= ENSG00000182149.20 TPM= 13.51 Transcript Type= NA
chr16	71895486	71928974	71895486	71928974	+	transcript4293.chr16.nnic@IST1	transcript4293.chr16.nnic	protein_coding	71895486,71915626,71916462,71917047,71918141,71920739,71921343,71922474,71923288,71927614	71895589,71915728,71916642,71917134,71918258,71920822,71921453,71922680,71923384,71928974	Gene ID= ENSG00000182149.20 TPM= 2.9 Transcript Type= NA
chr16	71895249	71931199	71895249	71931199	+	ENST00000378799.10@IST1	ENST00000378799.10	protein_coding	71895249,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71924769,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923380,71924817,71931199	Gene ID= ENSG00000182149.20 TPM= 52.13 Transcript Type= protein_coding
chr16	71895486	71928974	71895486	71928974	+	transcript4299.chr16.nic@IST1	transcript4299.chr16.nic	protein_coding	71895486,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923384,71928974	Gene ID= ENSG00000182149.20 TPM= 15.44 Transcript Type= NA
chr16	71895543	71929010	71895543	71929010	+	ENST00000329908.12@IST1	ENST00000329908.12	protein_coding	71895543,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71924773,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923380,71924817,71929010	Gene ID= ENSG00000182149.20 TPM= 55.02 Transcript Type= protein_coding
chr16	71895553	71929008	71895553	71929008	+	ENST00000378798.9@IST1	ENST00000378798.9	protein_coding	71895553,71915626,71916462,71917047,71920739,71921343,71922474,71924769,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71924817,71929008	Gene ID= ENSG00000182149.20 TPM= 3.86 Transcript Type= protein_coding
chr16	72008588	72027664	72008588	72027664	+	ENST00000572887.5@DHODH	ENST00000572887.5	protein_coding	72008588,72012050,72014473,72017024,72021124,72022362,72023165,72023480,72024145	72008785,72012262,72014672,72017106,72021311,72022475,72023318,72023633,72027664	Gene ID= ENSG00000102967.11 TPM= 14.48 Transcript Type= protein_coding
chr16	72008744	72025416	72008744	72025416	+	ENST00000219240.8@DHODH	ENST00000219240.8	protein_coding	72008744,72012050,72014473,72017024,72021124,72022362,72023165,72023474,72024145	72008785,72012262,72014672,72017106,72021311,72022475,72023318,72023633,72025416	Gene ID= ENSG00000102967.11 TPM= 2.9 Transcript Type= protein_coding
chr16	72084853	72093651	72084853	72093651	-	ENST00000268483.7@TXNL4B	ENST00000268483.7	protein_coding	72093367,72090618,72088987,72084853	72093651,72090786,72089138,72086802	Gene ID= ENSG00000140830.8 TPM= 10.62 Transcript Type= protein_coding
chr16	72093846	72112909	72093846	72112909	+	transcript4314.chr16.nic@DHX38	transcript4314.chr16.nic	protein_coding	72093846,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72104486,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413,72112625	72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104131,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112529,72112909	Gene ID= ENSG00000140829.11 TPM= 8.04 Transcript Type= NA
chr16	72093562	72112912	72093562	72112912	+	ENST00000268482.7@DHX38	ENST00000268482.7	protein_coding	72093562,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72104486,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413	72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104131,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112912	Gene ID= ENSG00000140829.11 TPM= 50.51 Transcript Type= protein_coding
chr16	72093847	72112912	72093847	72112912	+	transcript4320.chr16.nnic@DHX38	transcript4320.chr16.nnic	protein_coding	72093847,72096139,72096822,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72104486,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413	72094051,72096480,72097009,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104131,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112912	Gene ID= ENSG00000140829.11 TPM= 21.56 Transcript Type= NA
chr16	72782885	73048375	72782885	73048375	-	ENST00000268489.9@ZFHX3	ENST00000268489.9	protein_coding	73047752,72957427,72950469,72889731,72829779,72811905,72811577,72800027,72793255,72782885	73048375,72960194,72950965,72889962,72829859,72812038,72811777,72800129,72798714,72788848	Gene ID= ENSG00000140836.15 TPM= 65.64 Transcript Type= protein_coding
chr16	73057282	73058427	73057282	73058427	-	transcript4332.chr16.nnic@NA	transcript4332.chr16.nnic	NA	73057282	73058427	Gene ID= novel_gene_chr16_4333 TPM= 3.86 Transcript Type= NA
chr16	73058061	73059095	73058061	73059095	+	transcript4328.chr16.nnic@NA	transcript4328.chr16.nnic	NA	73058061	73059095	Gene ID= novel_gene_chr16_4329 TPM= 4.83 Transcript Type= NA
chr16	74296775	74306288	74296775	74306288	+	ENST00000219313.8@PSMD7	ENST00000219313.8	protein_coding	74296775,74300115,74301052,74301555,74302212,74304303,74305289	74296988,74300206,74301144,74301652,74302292,74304394,74306288	Gene ID= ENSG00000103035.10 TPM= 128.39 Transcript Type= protein_coding
chr16	74447427	74607114	74447427	74607114	-	ENST00000205061.9@GLG1	ENST00000205061.9	protein_coding	74606657,74532121,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465676,74463356,74462488,74462094,74459682,74457874,74456649,74453171,74447427	74607114,74532153,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813,74463479,74462630,74462195,74459789,74457994,74456755,74453334,74452131	Gene ID= ENSG00000090863.11 TPM= 26.55 Transcript Type= protein_coding
chr16	74451959	74607094	74451959	74607094	-	ENST00000422840.6@GLG1	ENST00000422840.6	protein_coding	74606657,74532121,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465676,74463356,74462488,74462094,74459682,74457874,74456649,74451959	74607094,74532153,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813,74463479,74462630,74462195,74459789,74457994,74456755,74453334	Gene ID= ENSG00000090863.11 TPM= 24.62 Transcript Type= protein_coding
chr16	74621394	74666881	74621394	74666881	-	ENST00000361070.8@RFWD3	ENST00000361070.8	protein_coding	74666786,74660932,74651920,74649132,74644541,74644362,74637856,74636346,74632523,74630781,74628452,74626343,74621394	74666881,74661451,74652122,74649202,74644735,74644453,74637970,74636577,74632673,74630957,74628666,74626554,74624071	Gene ID= ENSG00000168411.13 TPM= 3.86 Transcript Type= protein_coding
chr16	75111860	75116783	75111860	75116783	-	transcript4389.chr16.nic@LDHD	transcript4389.chr16.nic	protein_coding	75116649,75115548,75115198,75114827,75114526,75113966,75113742,75113535,75112602,75111860	75116783,75115660,75115339,75114968,75114685,75114165,75113870,75113662,75112924,75112521	Gene ID= ENSG00000166816.13 TPM= 2.9 Transcript Type= NA
chr16	75111896	75116771	75111896	75116771	-	ENST00000450168.2@LDHD	ENST00000450168.2	protein_coding	75116649,75115548,75115198,75114827,75114526,75113966,75113742,75113535,75112834,75112602,75111896	75116771,75115660,75115339,75114968,75114685,75114165,75113870,75113662,75112924,75112713,75112521	Gene ID= ENSG00000166816.13 TPM= 15.44 Transcript Type= protein_coding
chr16	75111860	75116767	75111860	75116767	-	ENST00000300051.8@LDHD	ENST00000300051.8	protein_coding	75116649,75115548,75115198,75114827,75114526,75113966,75113742,75113535,75112834,75112602,75111860	75116767,75115660,75115339,75114968,75114685,75114234,75113870,75113662,75112924,75112713,75112521	Gene ID= ENSG00000166816.13 TPM= 17.38 Transcript Type= protein_coding
chr16	75148518	75172236	75148518	75172236	+	transcript4403.chr16.nic@ZFP1	transcript4403.chr16.nic	protein_coding	75148518,75148901,75152909,75166770,75169253	75148643,75149267,75152966,75166896,75172236	Gene ID= ENSG00000184517.11 TPM= 1.93 Transcript Type= NA
chr16	75229037	75251386	75229037	75251386	-	transcript4413.chr16.nic@BCAR1	transcript4413.chr16.nic	protein_coding	75250669,75242470,75237183,75236882,75234889,75233846,75229037	75251386,75243090,75237344,75236998,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 36.49 Transcript Type= NA
chr16	75229037	75251671	75229037	75251671	-	transcript4423.chr16.nnic@BCAR1	transcript4423.chr16.nnic	protein_coding	75251471,75242470,75234889,75233846,75229037	75251671,75243090,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 26.85 Transcript Type= NA
chr16	75229037	75265994	75229037	75265994	-	transcript4424.chr16.nnic@BCAR1	transcript4424.chr16.nnic	protein_coding	75265825,75242470,75234889,75233846,75229037	75265994,75243090,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 23.96 Transcript Type= NA
chr16	75229030	75251609	75229030	75251609	-	ENST00000162330.9@BCAR1	ENST00000162330.9	protein_coding	75251471,75242470,75237183,75236882,75234889,75233846,75229030	75251609,75243090,75237344,75236998,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 91.99 Transcript Type= protein_coding
chr16	75229103	75266007	75229103	75266007	-	ENST00000538440.6@BCAR1	ENST00000538440.6	protein_coding	75265825,75242470,75237183,75236882,75234889,75233846,75229103	75266007,75243090,75237344,75236998,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 18.51 Transcript Type= protein_coding
chr16	75245994	75250077	75245994	75250077	-	ENST00000624205.1@AC009078.3	ENST00000624205.1	TEC	75245994	75250077	Gene ID= ENSG00000280152.1 TPM= 2.9 Transcript Type= TEC
chr16	75263874	75266030	75263874	75266030	-	transcript4429.chr16.nnic@NA	transcript4429.chr16.nnic	NA	75263874	75266030	Gene ID= novel_gene_chr16_4430 TPM= 11.58 Transcript Type= NA
chr16	75293710	75433490	75293710	75433490	-	transcript4436.chr16.nic@CFDP1	transcript4436.chr16.nic	protein_coding	75433289,75412535,75411825,75395090,75305024,75293710	75433490,75412754,75411952,75395209,75305182,75294042	Gene ID= ENSG00000153774.8 TPM= 1.93 Transcript Type= NA
chr16	75293710	75433485	75293710	75433485	-	ENST00000283882.3@CFDP1	ENST00000283882.3	protein_coding	75433289,75414578,75412535,75411825,75395090,75305024,75293710	75433485,75414695,75412754,75411952,75395209,75305182,75294042	Gene ID= ENSG00000153774.8 TPM= 26.06 Transcript Type= protein_coding
chr16	75433787	75436220	75433787	75436220	+	transcript4440.chr16.nnic@NA	transcript4440.chr16.nnic	NA	75433787	75436220	Gene ID= novel_gene_chr16_4441 TPM= 2.9 Transcript Type= NA
chr16	75443054	75464689	75443054	75464689	-	ENST00000357613.8@TMEM170A	ENST00000357613.8	protein_coding	75464468,75451738,75443054	75464689,75451839,75447688	Gene ID= ENSG00000166822.12 TPM= 1.93 Transcript Type= protein_coding
chr16	75536744	75556286	75536744	75556286	-	ENST00000258173.10@TMEM231	ENST00000258173.10	protein_coding	75556071,75555804,75545826,75545352,75542602,75541350,75536744	75556286,75555973,75545954,75545495,75542683,75541455,75540174	Gene ID= ENSG00000205084.10 TPM= 3.86 Transcript Type= protein_coding
chr16	75538136	75556268	75538136	75556268	-	ENST00000562410.5@TMEM231	ENST00000562410.5	protein_coding	75556071,75555804,75545826,75545352,75542602,75541350,75538136	75556268,75555973,75546077,75545495,75542683,75541455,75540174	Gene ID= ENSG00000205084.10 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr16	75566351	75577881	75566351	75577881	+	ENST00000037243.6@GABARAPL2	ENST00000037243.6	protein_coding	75566351,75566852,75568037,75577279	75566520,75566907,75568209,75577881	Gene ID= ENSG00000034713.7 TPM= 156.86 Transcript Type= protein_coding
chr16	75566389	75577881	75566389	75577881	+	ENST00000563744.1@GABARAPL2	ENST00000563744.1	protein_coding	75566389,75566852,75577279	75566520,75566907,75577881	Gene ID= ENSG00000034713.7 TPM= 2.41 Transcript Type= protein_coding
chr16	75599100	75623300	75599100	75623300	-	transcript4465.chr16.nic@ADAT1	transcript4465.chr16.nic	protein_coding	75622403,75620631,75620266,75618586,75617142,75612243,75608843,75608224,75603085,75599100	75623300,75620820,75620334,75618640,75617272,75612861,75608988,75608323,75603171,75600348	Gene ID= ENSG00000065457.10 TPM= 3.86 Transcript Type= NA
chr16	75627474	75647665	75627474	75647665	-	ENST00000319410.9@KARS	ENST00000319410.9	protein_coding	75647578,75644283,75641564,75640184,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627474	75647665,75644462,75641723,75640349,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993	Gene ID= ENSG00000065427.14 TPM= 31.86 Transcript Type= protein_coding
chr16	75627724	75647679	75627724	75647679	-	ENST00000302445.7@KARS	ENST00000302445.7	protein_coding	75647578,75641564,75640184,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627724	75647679,75641723,75640349,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993	Gene ID= ENSG00000065427.14 TPM= 133.21 Transcript Type= protein_coding
chr16	75627770	75647648	75627770	75647648	-	ENST00000564578.5@KARS	ENST00000564578.5	protein_coding	75647578,75644283,75641564,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627770	75647648,75644462,75641723,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993	Gene ID= ENSG00000065427.14 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr16	75647786	75657432	75647786	75657432	+	ENST00000300086.4@TERF2IP	ENST00000300086.4	protein_coding	75647786,75654273,75656207	75648552,75654397,75657432	Gene ID= ENSG00000166848.5 TPM= 120.66 Transcript Type= protein_coding
chr16	77191403	77200772	77191403	77200772	+	transcript4498.chr16.nic@MON1B	transcript4498.chr16.nic	protein_coding	77191403,77193451,77194335,77195535,77198108	77191633,77193777,77195154,77195682,77200772	Gene ID= ENSG00000103111.14 TPM= 12.55 Transcript Type= NA
chr16	79596482	79600502	79596482	79600502	-	transcript4510.chr16.nnic@MAF	transcript4510.chr16.nnic	protein_coding	79598785,79596482	79600502,79598403	Gene ID= ENSG00000178573.6 TPM= 3.86 Transcript Type= NA
chr16	79596640	79600710	79596640	79600710	-	transcript4511.chr16.nnic@MAF	transcript4511.chr16.nnic	protein_coding	79598785,79596640	79600710,79598403	Gene ID= ENSG00000178573.6 TPM= 1.93 Transcript Type= NA
chr16	79593838	79600714	79593838	79600714	-	ENST00000326043.4@MAF	ENST00000326043.4	protein_coding	79598785,79593838	79600714,79594553	Gene ID= ENSG00000178573.6 TPM= 4.83 Transcript Type= protein_coding
chr16	80975802	81006902	80975802	81006902	-	transcript4523.chr16.nic@CMC2	transcript4523.chr16.nic	protein_coding	81006734,80997314,80981806,80980770,80975802	81006902,80997429,80981877,80980879,80976179	Gene ID= ENSG00000103121.8 TPM= 10.62 Transcript Type= NA
chr16	80966448	81007114	80966448	81007114	-	ENST00000219400.7@CMC2	ENST00000219400.7	protein_coding	81006734,80997314,80981806,80966448	81007114,80997429,80981877,80976179	Gene ID= ENSG00000103121.8 TPM= 38.61 Transcript Type= protein_coding
chr16	80975801	81006894	80975801	81006894	-	transcript4529.chr16.nnic@CMC2	transcript4529.chr16.nnic	protein_coding	81006734,80975801	81006894,80976179	Gene ID= ENSG00000103121.8 TPM= 2.9 Transcript Type= NA
chr16	80975802	81006895	80975802	81006895	-	ENST00000486645.5@CMC2	ENST00000486645.5	protein_coding	81006734,80997314,80980770,80975802	81006895,80997429,80980879,80976179	Gene ID= ENSG00000103121.8 TPM= 1.93 Transcript Type= protein_coding
chr16	81006498	81029322	81006498	81029322	+	ENST00000305850.9@CENPN	ENST00000305850.9	protein_coding	81006498,81011930,81014136,81017326,81017758,81020100,81022597,81024715,81026526,81028171,81028569	81007277,81012110,81014181,81017385,81017834,81020276,81022698,81024778,81026638,81028297,81029322	Gene ID= ENSG00000166451.13 TPM= 1.93 Transcript Type= protein_coding
chr16	81035818	81045177	81035818	81045177	+	transcript4532.chr16.nnic@ATMIN	transcript4532.chr16.nnic	protein_coding	81035818,81035964,81041356,81042281,81043161	81035873,81036206,81041481,81042480,81045177	Gene ID= ENSG00000166454.9 TPM= 15.44 Transcript Type= NA
chr16	81035847	81047358	81035847	81047358	+	ENST00000299575.4@ATMIN	ENST00000299575.4	protein_coding	81035847,81041356,81042281,81043161	81036206,81041481,81042480,81047358	Gene ID= ENSG00000166454.9 TPM= 6.76 Transcript Type= protein_coding
chr16	81081938	81096425	81081938	81096425	-	ENST00000315467.8@GCSH	ENST00000315467.8	protein_coding	81096131,81090601,81087601,81084463,81081938	81096425,81090680,81087664,81084594,81082963	Gene ID= ENSG00000140905.10 TPM= 5.79 Transcript Type= protein_coding
chr16	81387606	81390799	81387606	81390799	+	transcript4557.chr16.nnic@NA	transcript4557.chr16.nnic	NA	81387606	81390799	Gene ID= novel_gene_chr16_4558 TPM= 4.83 Transcript Type= NA
chr16	81779258	81962693	81779258	81962693	+	ENST00000564138.5@PLCG2	ENST00000564138.5	protein_coding	81779258,81785943,81854444,81858263,81859116,81869214,81870852,81880910,81883269,81889172,81891472,81893709,81895807,81900612,81905403,81907685,81908416,81910520,81912597,81919484,81921198,81923485,81927082,81928558,81931497,81934429,81936169,81937758,81938801,81939892,81946175,81956695,81957956	81779424,81786182,81854587,81858356,81859163,81869298,81870935,81880953,81883341,81889273,81891590,81893794,81895927,81900780,81905507,81907774,81908591,81910720,81912716,81919664,81921269,81923594,81927178,81928624,81931654,81934531,81936378,81937903,81938915,81940059,81946263,81956879,81962693	Gene ID= ENSG00000197943.9 TPM= 2.9 Transcript Type= protein_coding
chr16	82148162	82170234	82148162	82170234	-	transcript4562.chr16.nnic@MPHOSPH6	transcript4562.chr16.nnic	protein_coding	82170125,82160237,82151424,82149309,82148162	82170234,82164194,82151514,82149403,82148863	Gene ID= ENSG00000135698.9 TPM= 1.93 Transcript Type= NA
chr16	82148162	82170226	82148162	82170226	-	ENST00000258169.8@MPHOSPH6	ENST00000258169.8	protein_coding	82170125,82164082,82151424,82149309,82148162	82170226,82164194,82151514,82149403,82148863	Gene ID= ENSG00000135698.9 TPM= 17.38 Transcript Type= protein_coding
chr16	82626803	83800640	82626803	83800640	+	ENST00000567109.5@CDH13	ENST00000567109.5	protein_coding	82626803,82858362,83032010,83125385,83217345,83344862,83486477,83602454,83670790,83678208,83748108,83779968,83783254,83795023	82627137,82858473,83032218,83125501,83217497,83345006,83486655,83602594,83670972,83678461,83748250,83780201,83783472,83800640	Gene ID= ENSG00000140945.16 TPM= 5.79 Transcript Type= protein_coding
chr16	83807843	83819737	83807843	83819737	+	ENST00000433866.6@HSBP1	ENST00000433866.6	protein_coding	83807843,83808680,83809305,83811421	83808121,83808746,83809425,83819737	Gene ID= ENSG00000230989.6 TPM= 49.23 Transcript Type= protein_coding
chr16	83899128	83916174	83899128	83916174	+	transcript4584.chr16.nnic@MLYCD	transcript4584.chr16.nnic	protein_coding	83899128,83906987,83908126,83912150,83914956	83899672,83907099,83908282,83912367,83916174	Gene ID= ENSG00000103150.5 TPM= 9.97 Transcript Type= NA
chr16	83899147	83916174	83899147	83916174	+	transcript4591.chr16.nnic@MLYCD	transcript4591.chr16.nnic	protein_coding	83899147,83906987,83908126,83912218,83914956	83899340,83907099,83908282,83912367,83916174	Gene ID= ENSG00000103150.5 TPM= 12.87 Transcript Type= NA
chr16	83912814	83916174	83912814	83916174	+	transcript4594.chr16.nnic@MLYCD	transcript4594.chr16.nnic	protein_coding	83912814,83914956	83912872,83916174	Gene ID= ENSG00000103150.5 TPM= 5.31 Transcript Type= NA
chr16	83900584	83901988	83900584	83901988	-	transcript4595.chr16.nnic@NA	transcript4595.chr16.nnic	NA	83900584	83901988	Gene ID= novel_gene_chr16_4596 TPM= 7.72 Transcript Type= NA
chr16	83953222	83966332	83953222	83966332	+	ENST00000393306.5@OSGIN1	ENST00000393306.5	protein_coding	83953222,83957640,83959260,83960569,83960981,83965062	83953370,83957738,83959396,83960760,83961072,83966332	Gene ID= ENSG00000140961.12 TPM= 46.33 Transcript Type= protein_coding
chr16	83962494	83964313	83962494	83964313	+	transcript4598.chr16.nnic@NA	transcript4598.chr16.nnic	NA	83962494	83964313	Gene ID= novel_gene_chr16_4599 TPM= 1.93 Transcript Type= NA
chr16	84053766	84116906	84053766	84116906	-	ENST00000343411.7@MBTPS1	ENST00000343411.7	protein_coding	84116735,84101621,84099053,84095602,84093711,84093188,84091732,84090875,84087358,84084983,84081747,84074597,84070588,84069866,84068339,84067667,84066489,84065690,84063305,84060682,84059302,84056005,84053766	84116906,84102107,84099310,84095805,84093821,84093297,84091848,84090942,84087460,84085134,84081908,84074741,84070776,84070038,84068454,84067823,84066613,84065767,84063445,84060813,84059428,84056135,84054645	Gene ID= ENSG00000140943.16 TPM= 18.34 Transcript Type= protein_coding
chr16	84117051	84117571	84117051	84117571	+	ENST00000565382.1@AC040169.1	ENST00000565382.1	antisense_RNA	84117051	84117571	Gene ID= ENSG00000260018.1 TPM= 9.65 Transcript Type= antisense_RNA
chr16	84117304	84119162	84117304	84119162	+	transcript4609.chr16.nnic@NA	transcript4609.chr16.nnic	NA	84117304	84119162	Gene ID= novel_gene_chr16_4610 TPM= 1.93 Transcript Type= NA
chr16	84122281	84145156	84122281	84145156	-	transcript4613.chr16.nnic@HSDL1	transcript4613.chr16.nnic	protein_coding	84145080,84135544,84131102,84129986,84129548,84122281	84145156,84135605,84131327,84130171,84129775,84124728	Gene ID= ENSG00000103160.11 TPM= 1.93 Transcript Type= NA
chr16	84122281	84145188	84122281	84145188	-	ENST00000219439.8@HSDL1	ENST00000219439.8	protein_coding	84145080,84135544,84131102,84129986,84129548,84122281	84145188,84135605,84131327,84130431,84129775,84124728	Gene ID= ENSG00000103160.11 TPM= 16.41 Transcript Type= protein_coding
chr16	84177854	84187052	84177854	84187052	-	ENST00000564208.5@TAF1C	ENST00000564208.5	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181328,84181043,84180170,84179946,84177854	84187052,84184899,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181186,84180344,84180083,84179851	Gene ID= ENSG00000103168.16 TPM= 8.52 Transcript Type= retained_intron
chr16	84177852	84187049	84177852	84187049	-	ENST00000341690.10@TAF1C	ENST00000341690.10	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84177852	84187049,84184899,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181463,84181186,84180344,84180080,84179851	Gene ID= ENSG00000103168.16 TPM= 8.52 Transcript Type= protein_coding
chr16	84178712	84187039	84178712	84187039	-	ENST00000566732.5@TAF1C	ENST00000566732.5	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84178712	84187039,84185060,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181463,84181186,84180344,84180083,84179851	Gene ID= ENSG00000103168.16 TPM= 2.25 Transcript Type= protein_coding
chr16	84294646	84329851	84294646	84329851	+	ENST00000219454.9@WFDC1	ENST00000219454.9	protein_coding	84294646,84312961,84318272,84319431,84324419,84326882,84329322	84295115,84313153,84318355,84319571,84324460,84326955,84329851	Gene ID= ENSG00000103175.10 TPM= 3.86 Transcript Type= protein_coding
chr16	84477195	84504651	84477195	84504651	-	transcript4638.chr16.nnic@TLDC1	transcript4638.chr16.nnic	protein_coding	84504601,84502721,84497934,84495683,84489278,84486631,84482592,84480529,84477195	84504651,84502842,84498111,84495913,84489422,84487059,84482710,84480708,84480026	Gene ID= ENSG00000140950.15 TPM= 1.93 Transcript Type= NA
chr16	84478028	84504661	84478028	84504661	-	transcript4639.chr16.nic@TLDC1	transcript4639.chr16.nic	protein_coding	84504601,84502721,84497934,84495683,84489278,84486631,84482592,84480529,84478028	84504661,84502862,84498111,84495913,84489422,84487059,84482710,84480708,84480026	Gene ID= ENSG00000140950.15 TPM= 1.93 Transcript Type= NA
chr16	84565594	84618077	84565594	84618077	-	ENST00000262428.4@COTL1	ENST00000262428.4	protein_coding	84617838,84617501,84590105,84565594	84618077,84617583,84590262,84566955	Gene ID= ENSG00000103187.7 TPM= 22.2 Transcript Type= protein_coding
chr16	84648513	84662309	84648513	84662309	+	transcript4652.chr16.nic@KLHL36	transcript4652.chr16.nic	protein_coding	84648513,84650852,84656871,84659760,84661578	84648887,84650930,84657944,84659917,84662309	Gene ID= ENSG00000135686.12 TPM= 1.93 Transcript Type= NA
chr16	84648525	84662314	84648525	84662314	+	ENST00000564996.5@KLHL36	ENST00000564996.5	protein_coding	84648525,84650852,84656871,84659760,84661578	84648649,84650930,84657944,84659917,84662314	Gene ID= ENSG00000135686.12 TPM= 5.79 Transcript Type= protein_coding
chr16	84699978	84779581	84699978	84779581	+	ENST00000219473.11@USP10	ENST00000219473.11	protein_coding	84699978,84733435,84740309,84744633,84758716,84759363,84759891,84760172,84762989,84764086,84768193,84772541,84775160,84778895	84700111,84733503,84740369,84745673,84758807,84759472,84759946,84760275,84763088,84764263,84768358,84772685,84775225,84779581	Gene ID= ENSG00000103194.15 TPM= 4.83 Transcript Type= protein_coding
chr16	84699975	84746106	84699975	84746106	+	transcript4666.chr16.nic@USP10	transcript4666.chr16.nic	protein_coding	84699975,84733435,84740309,84744633	84700111,84733503,84740369,84746106	Gene ID= ENSG00000103194.15 TPM= 1.93 Transcript Type= NA
chr16	84775029	84779922	84775029	84779922	+	transcript4667.chr16.nic@USP10	transcript4667.chr16.nic	protein_coding	84775029,84778895	84775225,84779922	Gene ID= ENSG00000103194.15 TPM= 16.41 Transcript Type= NA
chr16	84974460	85011536	84974460	85011536	-	transcript4670.chr16.nnic@ZDHHC7	transcript4670.chr16.nnic	protein_coding	85011286,84995922,84990304,84988763,84981870,84979189,84977924,84977095,84974460	85011536,84996007,84990635,84989053,84981994,84979285,84978005,84977225,84976519	Gene ID= ENSG00000153786.12 TPM= 8.21 Transcript Type= NA
chr16	84974181	85011535	84974181	85011535	-	ENST00000313732.8@ZDHHC7	ENST00000313732.8	protein_coding	85011286,84995922,84990304,84981870,84979189,84977924,84977095,84974181	85011535,84996007,84990635,84981994,84979285,84978005,84977225,84976519	Gene ID= ENSG00000153786.12 TPM= 80.6 Transcript Type= protein_coding
chr16	85286388	85294325	85286388	85294325	+	transcript4686.chr16.nnic@GSE1	transcript4686.chr16.nnic	protein_coding	85286388,85287049,85287686,85287862,85289521,85293607	85286451,85287159,85287759,85288008,85289646,85294325	Gene ID= ENSG00000131149.18 TPM= 3.86 Transcript Type= NA
chr16	85169211	85309523	85169211	85309523	+	transcript4694.chr16.nnic@GSE1	transcript4694.chr16.nnic	protein_coding	85169211,85308162	85171807,85309523	Gene ID= ENSG00000131149.18 TPM= 7.24 Transcript Type= NA
chr16	85169213	85175122	85169213	85175122	+	transcript4697.chr16.nnic@NA	transcript4697.chr16.nnic	NA	85169213	85175122	Gene ID= novel_gene_chr16_4698 TPM= 4.34 Transcript Type= NA
chr16	85654432	85676204	85654432	85676204	+	ENST00000412692.5@GSE1	ENST00000412692.5	protein_coding	85654432,85654794,85655726,85656343,85657277,85661146,85662981,85663344,85665976,85668140,85670995,85672405	85654450,85654991,85655917,85656665,85657604,85661765,85663093,85663614,85666347,85668424,85671098,85676204	Gene ID= ENSG00000131149.18 TPM= 26.06 Transcript Type= protein_coding
chr16	85778624	85799540	85778624	85799540	-	ENST00000253457.7@EMC8	ENST00000253457.7	protein_coding	85799065,85788974,85781211,85780379,85778624	85799540,85789050,85781280,85780473,85779867	Gene ID= ENSG00000131148.8 TPM= 48.75 Transcript Type= protein_coding
chr16	85799693	85807044	85799693	85807044	+	ENST00000562336.5@COX4I1	ENST00000562336.5	protein_coding	85799693,85801205,85804937,85805733,85806738	85799884,85801278,85805104,85805864,85807044	Gene ID= ENSG00000131143.8 TPM= 30.72 Transcript Type= protein_coding
chr16	85799697	85807002	85799697	85807002	+	ENST00000561569.5@COX4I1	ENST00000561569.5	protein_coding	85799697,85801184,85804937,85805733,85806738	85799752,85801278,85805104,85805864,85807002	Gene ID= ENSG00000131143.8 TPM= 58.23 Transcript Type= protein_coding
chr16	85898803	85922609	85898803	85922609	+	ENST00000268638.9@IRF8	ENST00000268638.9	protein_coding	85898803,85903015,85908990,85911570,85913131,85914473,85918417,85920109,85921106	85899223,85903189,85909173,85911658,85913236,85914520,85918803,85920224,85922609	Gene ID= ENSG00000140968.10 TPM= 3.86 Transcript Type= protein_coding
chr16	86530176	86555210	86530176	86555210	-	ENST00000360900.10@MTHFSD	ENST00000360900.10	protein_coding	86555169,86554645,86552033,86548464,86546559,86542101,86541697,86530176	86555210,86554751,86552146,86548577,86546649,86542213,86541822,86532481	Gene ID= ENSG00000103248.18 TPM= 12.55 Transcript Type= protein_coding
chr16	87302814	87383797	87302814	87383797	-	transcript4750.chr16.nic@FBXO31	transcript4750.chr16.nic	protein_coding	87383405,87360295,87358411,87347174,87343598,87342877,87336155,87335304,87333886,87315772,87314971,87305719,87302814	87383797,87360366,87358497,87347250,87343765,87342951,87336264,87335457,87334286,87315823,87315096,87305905,87303075	Gene ID= ENSG00000103264.17 TPM= 7.92 Transcript Type= NA
chr16	87302814	87383797	87302814	87383797	-	transcript4751.chr16.nic@FBXO31	transcript4751.chr16.nic	protein_coding	87383405,87360295,87347174,87343598,87342877,87336155,87335304,87333886,87315772,87314971,87305719,87302814	87383797,87360366,87347250,87343765,87342951,87336264,87335457,87334286,87315823,87315096,87305905,87303075	Gene ID= ENSG00000103264.17 TPM= 4.54 Transcript Type= NA
chr16	87329336	87383797	87329336	87383797	-	transcript4756.chr16.nic@FBXO31	transcript4756.chr16.nic	protein_coding	87383405,87360295,87358411,87347174,87343598,87342877,87336155,87335304,87333886,87329336	87383797,87360366,87358497,87347250,87343765,87342951,87336264,87335457,87334286,87331510	Gene ID= ENSG00000103264.17 TPM= 48.94 Transcript Type= NA
chr16	87329340	87383797	87329340	87383797	-	transcript4758.chr16.nnic@FBXO31	transcript4758.chr16.nnic	protein_coding	87383405,87360295,87358411,87347174,87343598,87342877,87336155,87335304,87334167,87329340	87383797,87360366,87358497,87347250,87343765,87342951,87336264,87335457,87334286,87331510	Gene ID= ENSG00000103264.17 TPM= 14.96 Transcript Type= NA
chr16	87326987	87383757	87326987	87383757	-	ENST00000311635.11@FBXO31	ENST00000311635.11	protein_coding	87383405,87360295,87347174,87343598,87342877,87336155,87335304,87333886,87326987	87383757,87360366,87347250,87343765,87342951,87336264,87335457,87334286,87331510	Gene ID= ENSG00000103264.17 TPM= 12.74 Transcript Type= protein_coding
chr16	87391800	87404779	87391800	87404779	+	ENST00000268607.9@MAP1LC3B	ENST00000268607.9	protein_coding	87391800,87398815,87402175,87402923	87392467,87398870,87402281,87404779	Gene ID= ENSG00000140941.12 TPM= 437.29 Transcript Type= protein_coding
chr16	87406246	87492045	87406246	87492045	-	ENST00000268616.8@ZCCHC14	ENST00000268616.8	protein_coding	87491669,87460008,87433128,87423810,87420607,87419783,87418847,87417460,87415276,87414414,87413055,87411516,87406246	87492045,87460131,87433201,87423881,87420716,87419877,87418901,87417742,87415367,87414541,87413195,87412976,87410335	Gene ID= ENSG00000140948.11 TPM= 13.51 Transcript Type= protein_coding
chr16	87707812	87765992	87707812	87765992	-	transcript4776.chr16.nic@KLHDC4	transcript4776.chr16.nic	protein_coding	87765792,87761949,87756399,87755194,87748673,87730552,87726765,87714498,87711235,87709265,87708350,87707812	87765992,87762040,87756477,87755292,87748809,87730644,87726924,87714573,87711443,87709667,87708466,87708072	Gene ID= ENSG00000104731.13 TPM= 7.24 Transcript Type= NA
chr16	87707812	87765992	87707812	87765992	-	transcript4780.chr16.nic@KLHDC4	transcript4780.chr16.nic	protein_coding	87765792,87761949,87756399,87755194,87748673,87726765,87714498,87711235,87709265,87708350,87707812	87765992,87762040,87756477,87755292,87748809,87726924,87714573,87711443,87709667,87708466,87708072	Gene ID= ENSG00000104731.13 TPM= 3.38 Transcript Type= NA
chr16	87698148	87702591	87698148	87702591	-	ENST00000446344.3@KLHDC4	ENST00000446344.3	protein_coding	87698148	87702591	Gene ID= ENSG00000104731.13 TPM= 2.9 Transcript Type= protein_coding
chr16	87707813	87765949	87707813	87765949	-	ENST00000270583.9@KLHDC4	ENST00000270583.9	protein_coding	87765792,87761949,87756399,87755194,87748673,87730552,87726765,87714498,87711235,87709265,87708350,87707813	87765949,87762040,87756477,87755292,87748809,87730644,87726924,87714573,87711443,87709667,87708466,87708075	Gene ID= ENSG00000104731.13 TPM= 25.42 Transcript Type= protein_coding
chr16	87707812	87765976	87707812	87765976	-	ENST00000347925.9@KLHDC4	ENST00000347925.9	protein_coding	87765792,87761949,87756399,87755194,87748673,87726765,87714498,87711235,87709265,87708350,87707812	87765976,87762040,87756477,87755292,87748809,87726924,87714573,87711443,87709667,87708466,87708075	Gene ID= ENSG00000104731.13 TPM= 6.11 Transcript Type= protein_coding
chr16	87951432	88077317	87951432	88077317	+	ENST00000286122.11@BANP	ENST00000286122.11	protein_coding	87951432,87975048,87981036,87984084,88004295,88006090,88018428,88027483,88033109,88035332,88037973,88065267,88072069,88076590	87951515,87975185,87981127,87984259,88004411,88006265,88018667,88027650,88033245,88035394,88038011,88065332,88072212,88077317	Gene ID= ENSG00000172530.20 TPM= 3.38 Transcript Type= protein_coding
chr16	87951433	88077317	87951433	88077317	+	transcript4790.chr16.nic@BANP	transcript4790.chr16.nic	protein_coding	87951433,87975048,87981036,87984060,88004295,88006090,88018428,88027483,88033109,88035323,88037973,88072069,88076590	87951515,87975185,87981127,87984259,88004411,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077317	Gene ID= ENSG00000172530.20 TPM= 3.38 Transcript Type= NA
chr16	87951434	88077318	87951434	88077318	+	ENST00000393208.6@BANP	ENST00000393208.6	protein_coding	87951434,87975048,87981036,87984060,88006090,88018428,88027483,88033109,88035323,88037973,88065267,88072069,88076590	87951515,87975185,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88065332,88072212,88077318	Gene ID= ENSG00000172530.20 TPM= 2.41 Transcript Type= protein_coding
chr16	87951487	88077318	87951487	88077318	+	ENST00000355022.8@BANP	ENST00000355022.8	protein_coding	87951487,87975048,87981036,87984060,88006090,88018428,88027483,88033109,88035323,88037973,88072069,88076590	87951515,87975185,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077318	Gene ID= ENSG00000172530.20 TPM= 1.45 Transcript Type= protein_coding
chr16	87951486	87952747	87951486	87952747	+	transcript4801.chr16.nnic@NA	transcript4801.chr16.nnic	NA	87951486	87952747	Gene ID= novel_gene_chr16_4802 TPM= 3.86 Transcript Type= NA
chr16	88534257	88535165	88534257	88535165	+	transcript4803.chr16.nnic@NA	transcript4803.chr16.nnic	NA	88534257	88535165	Gene ID= novel_gene_chr16_4804 TPM= 21.24 Transcript Type= NA
chr16	88570396	88631424	88570396	88631424	+	transcript4806.chr16.nic@ZC3H18	transcript4806.chr16.nic	protein_coding	88570396,88577110,88586600,88598178,88598620,88599791,88608934,88611268,88622197,88623219,88623958,88624602,88625202,88627622,88627920,88628758,88630485,88631101	88570566,88577375,88586684,88598326,88598712,88599948,88609051,88611536,88622388,88623344,88624062,88624745,88625267,88627782,88628119,88628854,88630581,88631424	Gene ID= ENSG00000158545.15 TPM= 1.93 Transcript Type= NA
chr16	88570381	88631966	88570381	88631966	+	ENST00000301011.9@ZC3H18	ENST00000301011.9	protein_coding	88570381,88577110,88586600,88598178,88598620,88599791,88608934,88611268,88622197,88623219,88623958,88624602,88625202,88627622,88627920,88628758,88630485,88631101	88570566,88577726,88586684,88598326,88598712,88599948,88609051,88611536,88622388,88623344,88624062,88624745,88625267,88627782,88628119,88628854,88630581,88631966	Gene ID= ENSG00000158545.15 TPM= 26.06 Transcript Type= protein_coding
chr16	88570403	88631398	88570403	88631398	+	ENST00000452588.6@ZC3H18	ENST00000452588.6	protein_coding	88570403,88577110,88586600,88587542,88598178,88598620,88599791,88608934,88611268,88622197,88623219,88623958,88624602,88625202,88627622,88627920,88628758,88630485,88631101	88570566,88577726,88586684,88587613,88598326,88598712,88599948,88609051,88611536,88622388,88623344,88624062,88624745,88625267,88627782,88628119,88628854,88630581,88631398	Gene ID= ENSG00000158545.15 TPM= 8.69 Transcript Type= protein_coding
chr16	88643283	88651152	88643283	88651152	-	ENST00000261623.7@CYBA	ENST00000261623.7	protein_coding	88650956,88648045,88647101,88646755,88646116,88643283	88651152,88648114,88647175,88646838,88646197,88643571	Gene ID= ENSG00000051523.10 TPM= 21.24 Transcript Type= protein_coding
chr16	88648939	88650800	88648939	88650800	-	transcript4815.chr16.nnic@NA	transcript4815.chr16.nnic	NA	88648939	88650800	Gene ID= novel_gene_chr16_4816 TPM= 1.93 Transcript Type= NA
chr16	88651935	88663142	88651935	88663142	-	transcript4818.chr16.nic@MVD	transcript4818.chr16.nic	protein_coding	88663011,88660748,88660520,88658650,88657915,88657436,88656105,88655656,88655199,88654692,88653300,88651935	88663142,88660841,88660637,88658720,88658029,88657582,88656304,88655730,88655417,88654807,88653408,88652605	Gene ID= ENSG00000167508.11 TPM= 7.24 Transcript Type= NA
chr16	88662102	88663161	88662102	88663161	-	ENST00000562741.1@MVD	ENST00000562741.1	protein_coding	88663011,88662102	88663161,88662167	Gene ID= ENSG00000167508.11 TPM= 1.93 Transcript Type= processed_transcript
chr16	88651935	88663110	88651935	88663110	-	ENST00000301012.7@MVD	ENST00000301012.7	protein_coding	88663011,88658650,88657915,88657436,88656105,88655656,88655199,88654692,88653300,88651935	88663110,88658720,88658029,88657582,88656304,88655730,88655417,88654807,88653408,88652605	Gene ID= ENSG00000167508.11 TPM= 12.07 Transcript Type= protein_coding
chr16	88677682	88686493	88677682	88686493	-	ENST00000332281.5@SNAI3	ENST00000332281.5	protein_coding	88686331,88681094,88677682	88686493,88681714,88678629	Gene ID= ENSG00000185669.5 TPM= 29.92 Transcript Type= protein_coding
chr16	88696495	88706421	88696495	88706421	-	ENST00000312838.8@RNF166	ENST00000312838.8	protein_coding	88706171,88701262,88699620,88698971,88698502,88696495	88706421,88701418,88699732,88699085,88698609,88697633	Gene ID= ENSG00000158717.10 TPM= 104.25 Transcript Type= protein_coding
chr16	88706463	88715386	88706463	88715386	+	ENST00000453996.6@CTU2	ENST00000453996.6	protein_coding	88706463,88707136,88709938,88710223,88711635,88712274,88712622,88713312,88713647,88714136,88714383,88714587,88714860,88715048,88715182	88706598,88707210,88710016,88710282,88711695,88712383,88712905,88713447,88713778,88714227,88714486,88714737,88714926,88715106,88715386	Gene ID= ENSG00000174177.12 TPM= 48.27 Transcript Type= protein_coding
chr16	88706483	88715386	88706483	88715386	+	ENST00000312060.9@CTU2	ENST00000312060.9	protein_coding	88706483,88707136,88709938,88710223,88711635,88712274,88712622,88713312,88713647,88714136,88714383,88714587,88714860,88715182	88706598,88707210,88710016,88710282,88711695,88712383,88712905,88713447,88713778,88714227,88714486,88714737,88714926,88715386	Gene ID= ENSG00000174177.12 TPM= 1.93 Transcript Type= protein_coding
chr16	88715343	88718318	88715343	88718318	-	ENST00000484567.5@PIEZO1	ENST00000484567.5	protein_coding	88717023,88716806,88716559,88716361,88716198,88715933,88715343	88718318,88716898,88716731,88716483,88716277,88716119,88715854	Gene ID= ENSG00000103335.21 TPM= 1.93 Transcript Type= retained_intron
chr16	88809469	88811929	88809469	88811929	-	transcript4865.chr16.nic@APRT	transcript4865.chr16.nic	protein_coding	88811550,88810423,88810070,88809469	88811929,88810556,88810148,88809840	Gene ID= ENSG00000198931.10 TPM= 6.76 Transcript Type= NA
chr16	88809469	88811925	88809469	88811925	-	ENST00000426324.6@APRT	ENST00000426324.6	protein_coding	88811820,88811550,88810423,88810070,88809469	88811925,88811656,88810556,88810148,88809706	Gene ID= ENSG00000198931.10 TPM= 14 Transcript Type= protein_coding
chr16	88809469	88811937	88809469	88811937	-	ENST00000568319.5@APRT	ENST00000568319.5	protein_coding	88811820,88811550,88810070,88809469	88811937,88811656,88810148,88809706	Gene ID= ENSG00000198931.10 TPM= 2.41 Transcript Type= nonsense_mediated_decay
chr16	88813734	88856970	88813734	88856970	-	transcript4854.chr16.nnic@GALNS	transcript4854.chr16.nnic	protein_coding	88856758,88842706,88841897,88840992,88837622,88836201,88835725,88835213,88831998,88826702,88824767,88822589,88818007,88813734	88856970,88842829,88841971,88841094,88837765,88836267,88835849,88835352,88832101,88826718,88824869,88822710,88818124,88814525	Gene ID= ENSG00000141012.12 TPM= 2.9 Transcript Type= NA
chr16	88813734	88856966	88813734	88856966	-	ENST00000268695.9@GALNS	ENST00000268695.9	protein_coding	88856758,88842706,88841897,88840992,88837622,88836201,88835725,88835213,88831998,88826702,88824767,88822589,88818007,88813734	88856966,88842829,88841971,88841094,88837765,88836267,88835849,88835352,88832101,88826838,88824869,88822710,88818124,88814525	Gene ID= ENSG00000141012.12 TPM= 7.72 Transcript Type= protein_coding
chr16	88857131	88861287	88857131	88861287	+	ENST00000565205.5@TRAPPC2L	ENST00000565205.5	protein_coding	88857131,88858619,88859345,88859893,88860914	88857183,88858789,88859750,88859972,88861287	Gene ID= ENSG00000167515.10 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr16	88857086	88862686	88857086	88862686	+	ENST00000301021.7@TRAPPC2L	ENST00000301021.7	protein_coding	88857086,88858619,88859663,88859893,88860911	88857183,88858791,88859750,88859972,88862686	Gene ID= ENSG00000167515.10 TPM= 7.72 Transcript Type= protein_coding
chr16	88857144	88861110	88857144	88861110	+	ENST00000564404.5@TRAPPC2L	ENST00000564404.5	protein_coding	88857144,88858619,88859345,88859893,88860893	88857183,88858789,88859750,88859972,88861110	Gene ID= ENSG00000167515.10 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr16	88857135	88861112	88857135	88861112	+	ENST00000567312.5@TRAPPC2L	ENST00000567312.5	protein_coding	88857135,88858619,88859893,88860914	88857183,88858789,88859972,88861112	Gene ID= ENSG00000167515.10 TPM= 2.9 Transcript Type= protein_coding
chr16	88883272	88887136	88883272	88887136	+	ENST00000565053.1@AC092384.2	ENST00000565053.1	antisense_RNA	88883272,88884621,88885742	88884218,88884844,88887136	Gene ID= ENSG00000259881.1 TPM= 9.65 Transcript Type= antisense_RNA
chr16	88883383	88887130	88883383	88887130	+	transcript4889.chr16.nnic@NA	transcript4889.chr16.nnic	NA	88883383	88887130	Gene ID= novel_gene_chr16_4890 TPM= 28.96 Transcript Type= NA
chr16	89093809	89155846	89093809	89155846	+	ENST00000614302.4@ACSF3	ENST00000614302.4	protein_coding	89093809,89098591,89100662,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89154090	89093996,89098763,89101347,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89155846	Gene ID= ENSG00000176715.15 TPM= 34.75 Transcript Type= protein_coding
chr16	89093913	89154584	89093913	89154584	+	transcript4899.chr16.nic@ACSF3	transcript4899.chr16.nic	protein_coding	89093913,89100662,89102604,89112092,89120801,89133136,89145267,89145938,89154090	89093996,89101347,89102759,89112246,89120913,89133262,89145401,89146049,89154584	Gene ID= ENSG00000176715.15 TPM= 2.25 Transcript Type= NA
chr16	89093883	89154589	89093883	89154589	+	ENST00000406948.7@ACSF3	ENST00000406948.7	protein_coding	89093883,89100662,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89154090	89093996,89101347,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89154589	Gene ID= ENSG00000176715.15 TPM= 8.04 Transcript Type= protein_coding
chr16	89093898	89154588	89093898	89154588	+	ENST00000378345.8@ACSF3	ENST00000378345.8	protein_coding	89093898,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89154090	89093992,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89154588	Gene ID= ENSG00000176715.15 TPM= 4.18 Transcript Type= protein_coding
chr16	89171747	89195492	89171747	89195492	+	transcript4905.chr16.nnic@CDH15	transcript4905.chr16.nnic	protein_coding	89171747,89179416,89180200,89183548,89185173,89187429,89188100,89190243,89191330,89191655,89192205,89193410,89193755,89194862	89171873,89179574,89180355,89183692,89185333,89187557,89188285,89190496,89191472,89191894,89192444,89193606,89193913,89195492	Gene ID= ENSG00000129910.7 TPM= 2.9 Transcript Type= NA
chr16	89171747	89190081	89171747	89190081	+	transcript4910.chr16.nnic@CDH15	transcript4910.chr16.nnic	protein_coding	89171747,89179416,89180200,89183548,89185173,89187429,89188100,89189816	89171873,89179574,89180355,89183692,89185333,89187557,89188285,89190081	Gene ID= ENSG00000129910.7 TPM= 1.93 Transcript Type= NA
chr16	89171747	89181506	89171747	89181506	+	transcript4912.chr16.nic@CDH15	transcript4912.chr16.nic	protein_coding	89171747,89179416,89180200	89171873,89179574,89181506	Gene ID= ENSG00000129910.7 TPM= 1.93 Transcript Type= NA
chr16	89171767	89195492	89171767	89195492	+	ENST00000289746.2@CDH15	ENST00000289746.2	protein_coding	89171767,89179416,89180200,89183548,89185173,89187429,89188100,89190243,89191330,89191655,89192205,89193470,89193755,89194862	89171873,89179574,89180355,89183692,89185333,89187557,89188285,89190496,89191472,89191894,89192444,89193606,89193913,89195492	Gene ID= ENSG00000129910.7 TPM= 126.46 Transcript Type= protein_coding
chr16	89180976	89182053	89180976	89182053	-	transcript4915.chr16.nnic@NA	transcript4915.chr16.nnic	NA	89180976	89182053	Gene ID= novel_gene_chr16_4916 TPM= 5.79 Transcript Type= NA
chr16	89189308	89190086	89189308	89190086	+	transcript4913.chr16.nnic@NA	transcript4913.chr16.nnic	NA	89189308	89190086	Gene ID= novel_gene_chr16_4914 TPM= 1.93 Transcript Type= NA
chr16	89215211	89217653	89215211	89217653	-	ENST00000570267.2@AC009113.1	ENST00000570267.2	antisense_RNA	89215211	89217653	Gene ID= ENSG00000259877.2 TPM= 8.69 Transcript Type= antisense_RNA
chr16	89217705	89232622	89217705	89232622	+	transcript4925.chr16.nic@ZNF778	transcript4925.chr16.nic	protein_coding	89217705,89220997,89223157,89224719,89225555,89226694	89217910,89221152,89223283,89224802,89225631,89232622	Gene ID= ENSG00000170100.13 TPM= 7.72 Transcript Type= NA
chr16	89285175	89490595	89285175	89490595	-	transcript4931.chr16.nic@ANKRD11	transcript4931.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89291681,89291013,89290625,89288528,89286039,89285564,89285175	89490595,89418368,89317075,89305344,89291777,89291183,89290828,89288670,89286186,89285649,89285562	Gene ID= ENSG00000167522.14 TPM= 3.86 Transcript Type= NA
chr16	89285175	89490595	89285175	89490595	-	transcript4938.chr16.nic@ANKRD11	transcript4938.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89285564,89285175	89490595,89418368,89317075,89305344,89291183,89290828,89288670,89286186,89285649,89285562	Gene ID= ENSG00000167522.14 TPM= 8.69 Transcript Type= NA
chr16	89285215	89490584	89285215	89490584	-	transcript4946.chr16.nic@ANKRD11	transcript4946.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89285215	89490584,89418368,89317078,89305344,89291183,89290828,89288670,89286186,89285649	Gene ID= ENSG00000167522.14 TPM= 2.9 Transcript Type= NA
chr16	89286663	89490577	89286663	89490577	-	transcript4949.chr16.nic@ANKRD11	transcript4949.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89288528,89286663	89490577,89418368,89317078,89305344,89291183,89290828,89288670,89287113	Gene ID= ENSG00000167522.14 TPM= 3.86 Transcript Type= NA
chr16	89286663	89490571	89286663	89490571	-	transcript4950.chr16.nnic@ANKRD11	transcript4950.chr16.nnic	protein_coding	89490245,89418284,89316933,89305206,89291681,89291013,89290625,89286663	89490571,89418368,89317078,89305344,89291799,89291183,89290828,89288670	Gene ID= ENSG00000167522.14 TPM= 7.24 Transcript Type= NA
chr16	89286663	89490595	89286663	89490595	-	transcript4953.chr16.nic@ANKRD11	transcript4953.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89286663	89490595,89418368,89317078,89305344,89291183,89290828,89288670	Gene ID= ENSG00000167522.14 TPM= 8.21 Transcript Type= NA
chr16	89267627	89490318	89267627	89490318	-	ENST00000378330.6@ANKRD11	ENST00000378330.6	protein_coding	89490245,89431256,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89279072,89275093,89274814,89270817,89267627	89490318,89431326,89418368,89317078,89305344,89291183,89290828,89288670,89286186,89285649,89275191,89274957,89270909,89268663	Gene ID= ENSG00000167522.14 TPM= 26.06 Transcript Type= protein_coding
chr16	89298876	89490586	89298876	89490586	-	transcript4958.chr16.nic@ANKRD11	transcript4958.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89298876	89490586,89418368,89317078,89305344,89300962	Gene ID= ENSG00000167522.14 TPM= 2.9 Transcript Type= NA
chr16	89285175	89490318	89285175	89490318	-	ENST00000613312.4@ANKRD11	ENST00000613312.4	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89285564,89285175	89490318,89418368,89317078,89305344,89291183,89290828,89288670,89286186,89285649,89285562	Gene ID= ENSG00000167522.14 TPM= 5.79 Transcript Type= protein_coding
chr16	89322701	89324923	89322701	89324923	+	transcript4962.chr16.nic@AC137932.2	transcript4962.chr16.nic	processed_transcript	89322701,89324236	89323333,89324923	Gene ID= ENSG00000261253.2 TPM= 3.86 Transcript Type= NA
chr16	89323224	89324923	89323224	89324923	+	ENST00000565667.2@AC137932.2	ENST00000565667.2	processed_transcript	89323224,89323766,89324236	89323333,89323920,89324923	Gene ID= ENSG00000261253.2 TPM= 4.83 Transcript Type= antisense_RNA
chr16	89508403	89557766	89508403	89557766	+	ENST00000268704.6@SPG7	ENST00000268704.6	protein_coding	89508403,89510490,89512948,89524006,89526329,89529477,89530683,89531904,89532463,89544648,89546658,89548003,89550494,89552979,89553794,89554486,89556887	89508600,89510592,89513037,89524247,89526468,89529579,89530808,89532066,89532636,89544772,89546760,89548113,89550609,89553135,89553960,89554563,89557766	Gene ID= ENSG00000197912.14 TPM= 185.82 Transcript Type= protein_coding
chr16	89508411	89537721	89508411	89537721	+	ENST00000341316.6@SPG7	ENST00000341316.6	protein_coding	89508411,89510490,89512948,89524006,89526329,89529477,89530683,89531904,89532463,89536765	89508600,89510592,89513037,89524247,89526468,89529579,89530808,89532066,89532636,89537721	Gene ID= ENSG00000197912.14 TPM= 6.76 Transcript Type= protein_coding
chr16	89560681	89563080	89560681	89563080	+	ENST00000567815.5@RPL13	ENST00000567815.5	protein_coding	89560681,89560954,89561227,89561578,89562335,89562884	89560712,89561063,89561368,89561751,89562391,89563080	Gene ID= ENSG00000167526.13 TPM= 56.15 Transcript Type= protein_coding
chr16	89560657	89566828	89560657	89566828	+	ENST00000311528.9@RPL13	ENST00000311528.9	protein_coding	89560657,89560940,89561227,89561578,89562335,89562884	89560712,89561063,89561368,89561751,89562391,89566828	Gene ID= ENSG00000167526.13 TPM= 6.92 Transcript Type= protein_coding
chr16	89560679	89563067	89560679	89563067	+	ENST00000484610.5@RPL13	ENST00000484610.5	protein_coding	89560679,89560940,89561227,89562335,89562884	89560712,89561063,89561751,89562391,89563067	Gene ID= ENSG00000167526.13 TPM= 4.03 Transcript Type= retained_intron
chr16	89560904	89563066	89560904	89563066	+	ENST00000399461.8@RPL13	ENST00000399461.8	protein_coding	89560904,89561578,89562335,89562884	89561368,89561751,89562391,89563066	Gene ID= ENSG00000167526.13 TPM= 8.85 Transcript Type= retained_intron
chr16	89644431	89657845	89644431	89657845	-	ENST00000397901.7@CHMP1A	ENST00000397901.7	protein_coding	89657582,89653904,89651569,89649351,89647203,89646527,89644431	89657845,89653923,89651646,89649497,89647331,89646714,89646087	Gene ID= ENSG00000131165.14 TPM= 141.9 Transcript Type= protein_coding
chr16	89644463	89657709	89644463	89657709	-	ENST00000535997.6@CHMP1A	ENST00000535997.6	protein_coding	89657582,89651569,89649351,89647203,89646527,89644463	89657709,89651646,89649497,89647331,89646714,89646087	Gene ID= ENSG00000131165.14 TPM= 4.83 Transcript Type= protein_coding
chr16	89686668	89696364	89686668	89696364	+	ENST00000353379.11@CDK10	ENST00000353379.11	protein_coding	89686668,89689252,89690553,89691443,89691806,89692449,89693274,89693398,89694173,89694665,89694931,89695293,89695595	89686797,89689324,89690624,89691545,89691887,89692516,89693326,89693467,89694232,89694788,89695070,89695345,89696364	Gene ID= ENSG00000185324.21 TPM= 9.65 Transcript Type= protein_coding
chr16	89686670	89696353	89686670	89696353	+	transcript5030.chr16.nic@CDK10	transcript5030.chr16.nic	protein_coding	89686670,89690553,89691443,89691806,89692449,89693274,89693398,89694173,89694931,89695293,89695595	89686797,89690624,89691545,89691887,89692516,89693326,89693467,89694788,89695070,89695345,89696353	Gene ID= ENSG00000185324.21 TPM= 8.69 Transcript Type= NA
chr16	89696343	89701695	89696343	89701695	-	ENST00000289805.9@SPATA2L	ENST00000289805.9	protein_coding	89701628,89700930,89696343	89701695,89701233,89698305	Gene ID= ENSG00000158792.15 TPM= 5.79 Transcript Type= protein_coding
chr16	89720994	89739816	89720994	89739816	+	transcript5043.chr16.nic@ZNF276	transcript5043.chr16.nic	protein_coding	89720994,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721276,89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89739816	Gene ID= ENSG00000158805.11 TPM= 1.93 Transcript Type= NA
chr16	89720985	89740903	89720985	89740903	+	ENST00000289816.9@ZNF276	ENST00000289816.9	protein_coding	89720985,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721276,89722834,89723183,89723709,89727357,89729318,89733412,89733557,89734038,89737905,89740903	Gene ID= ENSG00000158805.11 TPM= 1.93 Transcript Type= protein_coding
chr16	89721002	89739816	89721002	89739816	+	transcript5053.chr16.nic@ZNF276	transcript5053.chr16.nic	protein_coding	89721002,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89739816	Gene ID= ENSG00000158805.11 TPM= 1.93 Transcript Type= NA
chr16	89720994	89738570	89720994	89738570	+	transcript5055.chr16.nic@ZNF276	transcript5055.chr16.nic	protein_coding	89720994,89722531,89723137,89723260,89727279,89729235,89733302,89733921,89737806,89737976	89721276,89722834,89723183,89723709,89727357,89729318,89733557,89734038,89737905,89738570	Gene ID= ENSG00000158805.11 TPM= 2.41 Transcript Type= NA
chr16	89720994	89740903	89720994	89740903	+	transcript5056.chr16.nnic@ZNF276	transcript5056.chr16.nnic	protein_coding	89720994,89722531,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721276,89722834,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89740903	Gene ID= ENSG00000158805.11 TPM= 2.9 Transcript Type= NA
chr16	89721573	89738571	89721573	89738571	+	ENST00000568295.5@ZNF276	ENST00000568295.5	protein_coding	89721573,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721845,89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89738571	Gene ID= ENSG00000158805.11 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chr16	89873545	89911379	89873545	89911379	+	transcript5071.chr16.nic@TCF25	transcript5071.chr16.nic	protein_coding	89873545,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89908966,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89909107,89910663,89911379	Gene ID= ENSG00000141002.19 TPM= 9.72 Transcript Type= NA
chr16	89873545	89911379	89873545	89911379	+	transcript5079.chr16.nnic@TCF25	transcript5079.chr16.nnic	protein_coding	89873545,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898887,89900794,89904205,89905096,89906284,89907322,89910663,89911379	Gene ID= ENSG00000141002.19 TPM= 10.69 Transcript Type= NA
chr16	89873545	89911379	89873545	89911379	+	transcript5080.chr16.nic@TCF25	transcript5080.chr16.nic	protein_coding	89873545,89883351,89884582,89885848,89887652,89892193,89893728,89895083,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89910663,89911379	Gene ID= ENSG00000141002.19 TPM= 18.17 Transcript Type= NA
chr16	89873612	89911384	89873612	89911384	+	ENST00000263346.12@TCF25	ENST00000263346.12	protein_coding	89873612,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89910663,89911384	Gene ID= ENSG00000141002.19 TPM= 108.91 Transcript Type= protein_coding
chr16	89873586	89911384	89873586	89911384	+	ENST00000263347.11@TCF25	ENST00000263347.11	protein_coding	89873586,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89908966,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89909083,89910663,89911384	Gene ID= ENSG00000141002.19 TPM= 10.69 Transcript Type= protein_coding
chr16	89913999	89915066	89913999	89915066	+	transcript5085.chr16.nnic@NA	transcript5085.chr16.nnic	NA	89913999	89915066	Gene ID= novel_gene_chr16_5086 TPM= 1.93 Transcript Type= NA
chr16	89947925	89968060	89947925	89968060	+	ENST00000563594.5@DEF8	ENST00000563594.5	protein_coding	89947925,89949417,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964170,89964466,89965861	89948814,89949513,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89963443,89964310,89964575,89968060	Gene ID= ENSG00000140995.16 TPM= 30.89 Transcript Type= protein_coding
chr16	89948731	89959363	89948731	89959363	+	ENST00000610455.4@DEF8	ENST00000610455.4	protein_coding	89948731,89954243,89955169,89957511,89959014	89948814,89954376,89955266,89957660,89959363	Gene ID= ENSG00000140995.16 TPM= 4.83 Transcript Type= protein_coding
chr16	89948795	89959366	89948795	89959366	+	ENST00000418391.6@DEF8	ENST00000418391.6	protein_coding	89948795,89949417,89954243,89955169,89957511,89959014	89948814,89949513,89954376,89955266,89957660,89959366	Gene ID= ENSG00000140995.16 TPM= 6.76 Transcript Type= protein_coding
chr16	89969791	89972534	89969791	89972534	-	ENST00000314994.4@CENPBD1	ENST00000314994.4	protein_coding	89969791	89972534	Gene ID= ENSG00000177946.5 TPM= 9.65 Transcript Type= protein_coding
chr16	89972588	89996623	89972588	89996623	+	transcript5094.chr16.nnic@AFG3L1P	transcript5094.chr16.nnic	transcribed_unitary_pseudogene	89972588,89977639,89978810,89980242,89981773,89984531,89985446,89990866,89992721,89993768,89994693	89972765,89977802,89978878,89980336,89981923,89984599,89985570,89991003,89992828,89993893,89996623	Gene ID= ENSG00000223959.8 TPM= 2.41 Transcript Type= NA
chr16	89972588	89996623	89972588	89996623	+	transcript5095.chr16.nic@AFG3L1P	transcript5095.chr16.nic	transcribed_unitary_pseudogene	89972588,89977639,89978810,89980242,89981773,89984531,89988852,89990866,89992721,89993768,89994693	89972765,89977802,89978878,89980336,89981923,89984599,89988951,89991003,89992828,89993893,89996623	Gene ID= ENSG00000223959.8 TPM= 5.31 Transcript Type= NA
chr16	89972588	89996610	89972588	89996610	+	transcript5096.chr16.nic@AFG3L1P	transcript5096.chr16.nic	transcribed_unitary_pseudogene	89972588,89977639,89978810,89980242,89981773,89984531,89988852,89990866,89992721,89993768,89994759	89972765,89977802,89978878,89980336,89981923,89984599,89988951,89991003,89992828,89993893,89996610	Gene ID= ENSG00000223959.8 TPM= 4.34 Transcript Type= NA
chr16	89972588	89996623	89972588	89996623	+	transcript5099.chr16.nic@AFG3L1P	transcript5099.chr16.nic	transcribed_unitary_pseudogene	89972588,89977639,89978810,89980242,89981773,89984531,89990866,89992721,89993768,89994693	89972765,89977802,89978878,89980336,89981923,89984599,89991003,89992828,89993893,89996623	Gene ID= ENSG00000223959.8 TPM= 2.41 Transcript Type= NA
chr16	89972588	89984701	89972588	89984701	+	transcript5103.chr16.nic@AFG3L1P	transcript5103.chr16.nic	transcribed_unitary_pseudogene	89972588,89977639,89978810,89980242,89981773,89984531	89972765,89977802,89978878,89980336,89981923,89984701	Gene ID= ENSG00000223959.8 TPM= 3.86 Transcript Type= NA
chr16	89972609	89984701	89972609	89984701	+	transcript5104.chr16.nic@AFG3L1P	transcript5104.chr16.nic	transcribed_unitary_pseudogene	89972609,89977678,89978810,89980242,89981773,89984531	89972765,89977802,89978878,89980336,89981923,89984701	Gene ID= ENSG00000223959.8 TPM= 1.93 Transcript Type= NA
chr16	90004865	90019473	90004865	90019473	-	ENST00000002501.10@DBNDD1	ENST00000002501.10	protein_coding	90019311,90009284,90008784,90004865	90019473,90009430,90008924,90006492	Gene ID= ENSG00000003249.13 TPM= 62.75 Transcript Type= protein_coding
chr16	90022600	90044971	90022600	90044971	+	ENST00000620723.4@GAS8	ENST00000620723.4	protein_coding	90022600,90027636,90031176,90032718,90035633,90036381,90037232,90037762,90040300,90042470,90043196	90022724,90027722,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90042535,90044971	Gene ID= ENSG00000141013.16 TPM= 3.38 Transcript Type= protein_coding
chr16	90022600	90044971	90022600	90044971	+	ENST00000268699.8@GAS8	ENST00000268699.8	protein_coding	90022600,90027636,90031299,90032718,90035633,90036381,90037232,90037762,90040300,90042470,90043196	90022724,90027722,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90042535,90044971	Gene ID= ENSG00000141013.16 TPM= 14.96 Transcript Type= protein_coding
chr16	90022651	90043472	90022651	90043472	+	transcript5117.chr16.nic@GAS8	transcript5117.chr16.nic	protein_coding	90022651,90027636,90031176,90032718,90035633,90036381,90037232,90037762,90040300,90042470	90022724,90027722,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90043472	Gene ID= ENSG00000141013.16 TPM= 1.93 Transcript Type= NA
chr16	90019643	90043472	90019643	90043472	+	ENST00000536122.7@GAS8	ENST00000536122.7	protein_coding	90019643,90027636,90031299,90032718,90035633,90036381,90037232,90037762,90040300,90042470,90043196	90019768,90027722,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90042535,90043472	Gene ID= ENSG00000141013.16 TPM= 7.72 Transcript Type= protein_coding
chr17	212502	341423	212502	341423	-	transcript5.chr17.nnic@RPH3AL	transcript5.chr17.nnic	protein_coding	341206,327467,321272,319420,281768,247111,219623,215654,212502	341423,327579,321415,319549,281854,247285,219736,215802,213923	Gene ID= ENSG00000181031.15 TPM= 13.51 Transcript Type= NA
chr17	212502	215973	212502	215973	-	transcript11.chr17.nnic@RPH3AL	transcript11.chr17.nnic	protein_coding	215949,215654,212502	215973,215915,213923	Gene ID= ENSG00000181031.15 TPM= 22.2 Transcript Type= NA
chr17	439978	445939	439978	445939	-	ENST00000329099.4@RFLNB	ENST00000329099.4	protein_coding	445836,439978	445939,443494	Gene ID= ENSG00000183688.4 TPM= 18.34 Transcript Type= protein_coding
chr17	519052	526020	519052	526020	-	transcript27.chr17.nnic@VPS53	transcript27.chr17.nnic	protein_coding	525874,521601,519826,519052	526020,521740,519930,519298	Gene ID= ENSG00000141252.19 TPM= 1.93 Transcript Type= NA
chr17	511488	516238	511488	516238	-	transcript30.chr17.nnic@NA	transcript30.chr17.nnic	NA	511488	516238	Gene ID= novel_gene_chr17_31 TPM= 6.76 Transcript Type= NA
chr17	714891	716167	714891	716167	+	transcript34.chr17.nnic@NA	transcript34.chr17.nnic	NA	714891	716167	Gene ID= novel_gene_chr17_35 TPM= 3.86 Transcript Type= NA
chr17	744414	752261	744414	752261	-	ENST00000319004.5@GEMIN4	ENST00000319004.5	protein_coding	752133,744414	752261,748032	Gene ID= ENSG00000179409.10 TPM= 9.65 Transcript Type= protein_coding
chr17	759097	782341	759097	782341	-	ENST00000301329.10@GLOD4	ENST00000301329.10	protein_coding	782166,778695,776868,775775,771325,770421,770044,769869,759097	782341,778744,776988,775919,771461,770507,770157,769955,760238	Gene ID= ENSG00000167699.13 TPM= 18.34 Transcript Type= protein_coding
chr17	782273	792509	782273	792509	+	ENST00000304478.8@MRM3	ENST00000304478.8	protein_coding	782273,783083,787965,791534	782692,783327,788132,792509	Gene ID= ENSG00000171861.10 TPM= 54.06 Transcript Type= protein_coding
chr17	799313	979824	799313	979824	-	transcript59.chr17.nic@NXN	transcript59.chr17.nic	protein_coding	979319,825961,823632,822357,819439,803682,799313	979824,826078,823765,822457,819545,803806,801131	Gene ID= ENSG00000167693.16 TPM= 31.86 Transcript Type= NA
chr17	799313	979770	799313	979770	-	ENST00000336868.7@NXN	ENST00000336868.7	protein_coding	979319,825961,823632,822357,819439,805068,803682,799313	979770,826078,823765,822457,819545,805247,803806,801131	Gene ID= ENSG00000167693.16 TPM= 136.11 Transcript Type= protein_coding
chr17	909632	911212	909632	911212	+	ENST00000576252.1@AC087392.1	ENST00000576252.1	antisense_RNA	909632,910694	909932,911212	Gene ID= ENSG00000262003.1 TPM= 1.93 Transcript Type= antisense_RNA
chr17	1279663	1300987	1279663	1300987	+	ENST00000333813.3@TUSC5	ENST00000333813.3	protein_coding	1279663,1295491,1298251	1280388,1295623,1300987	Gene ID= ENSG00000184811.3 TPM= 3.86 Transcript Type= protein_coding
chr17	1344539	1400236	1344539	1400236	-	transcript86.chr17.nic@YWHAE	transcript86.chr17.nic	protein_coding	1400047,1369709,1364859,1361902,1361092,1354211,1347962,1344539	1400236,1369741,1365058,1362008,1361298,1354347,1348008,1345499	Gene ID= ENSG00000108953.16 TPM= 85.91 Transcript Type= NA
chr17	1344539	1400235	1344539	1400235	-	transcript89.chr17.nic@YWHAE	transcript89.chr17.nic	protein_coding	1400047,1364859,1361902,1361092,1354211,1347962,1344539	1400235,1365058,1362008,1361298,1354347,1348008,1345499	Gene ID= ENSG00000108953.16 TPM= 265.46 Transcript Type= NA
chr17	1398870	1400221	1398870	1400221	-	transcript102.chr17.nnic@YWHAE	transcript102.chr17.nnic	protein_coding	1400047,1398870	1400221,1399016	Gene ID= ENSG00000108953.16 TPM= 2.9 Transcript Type= NA
chr17	1344540	1400220	1344540	1400220	-	ENST00000571732.5@YWHAE	ENST00000571732.5	protein_coding	1400047,1369709,1364859,1361902,1361092,1354211,1344540	1400220,1369741,1365058,1362008,1361298,1354347,1345499	Gene ID= ENSG00000108953.16 TPM= 46.33 Transcript Type= protein_coding
chr17	1420689	1456223	1420689	1456223	-	ENST00000398970.5@CRK	ENST00000398970.5	protein_coding	1455877,1436790,1420689	1456223,1437155,1423650	Gene ID= ENSG00000167193.7 TPM= 12.23 Transcript Type= protein_coding
chr17	1420689	1456258	1420689	1456258	-	ENST00000300574.2@CRK	ENST00000300574.2	protein_coding	1455877,1436620,1420689	1456258,1437155,1423650	Gene ID= ENSG00000167193.7 TPM= 15.13 Transcript Type= protein_coding
chr17	1464186	1486201	1464186	1486201	-	ENST00000575158.5@MYO1C	ENST00000575158.5	protein_coding	1486055,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464186	1486201,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752	Gene ID= ENSG00000197879.14 TPM= 9.97 Transcript Type= protein_coding
chr17	1464098	1492812	1464098	1492812	-	ENST00000359786.9@MYO1C	ENST00000359786.9	protein_coding	1492413,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464098	1492812,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752	Gene ID= ENSG00000197879.14 TPM= 10.94 Transcript Type= protein_coding
chr17	1464188	1491678	1464188	1491678	-	ENST00000361007.6@MYO1C	ENST00000361007.6	protein_coding	1491600,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464188	1491678,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752	Gene ID= ENSG00000197879.14 TPM= 10.94 Transcript Type= protein_coding
chr17	1494571	1516888	1494571	1516888	-	ENST00000421807.6@INPP5K	ENST00000421807.6	protein_coding	1516456,1513872,1513453,1509683,1509178,1508115,1506980,1497936,1496666,1496319,1496060,1494571	1516888,1513979,1513561,1509799,1509353,1508226,1507089,1498122,1496803,1496402,1496164,1495879	Gene ID= ENSG00000132376.19 TPM= 76.74 Transcript Type= protein_coding
chr17	1494571	1516669	1494571	1516669	-	transcript136.chr17.nic@INPP5K	transcript136.chr17.nic	protein_coding	1516456,1513872,1509683,1509178,1508115,1506980,1497936,1496666,1496319,1496060,1494571	1516669,1513979,1509799,1509353,1508226,1507089,1498122,1496803,1496402,1496164,1495879	Gene ID= ENSG00000132376.19 TPM= 16.89 Transcript Type= NA
chr17	1516931	1518096	1516931	1518096	+	ENST00000425081.2@PITPNA-AS1	ENST00000425081.2	antisense_RNA	1516931,1517718	1517093,1518096	Gene ID= ENSG00000236618.2 TPM= 10.62 Transcript Type= antisense_RNA
chr17	1520213	1562781	1520213	1562781	-	transcript146.chr17.nic@PITPNA	transcript146.chr17.nic	protein_coding	1562656,1558529,1553004,1548296,1543020,1541566,1538869,1535441,1535182,1534099,1521579,1520213	1562781,1558559,1553149,1548387,1543027,1541640,1538952,1535518,1535292,1534221,1521645,1520538	Gene ID= ENSG00000174238.14 TPM= 4.83 Transcript Type= NA
chr17	1517993	1562791	1517993	1562791	-	ENST00000539476.5@PITPNA	ENST00000539476.5	protein_coding	1562541,1558529,1553004,1548296,1541642,1541566,1538869,1535441,1535182,1534099,1521579,1517993	1562791,1558559,1553149,1548387,1541649,1541640,1538952,1535518,1535292,1534221,1521645,1520538	Gene ID= ENSG00000174238.14 TPM= 11.58 Transcript Type= protein_coding
chr17	1570056	1572432	1570056	1572432	-	transcript148.chr17.nnic@NA	transcript148.chr17.nnic	NA	1570056	1572432	Gene ID= novel_gene_chr17_149 TPM= 1.93 Transcript Type= NA
chr17	1633865	1645732	1633865	1645732	-	transcript165.chr17.nic@SCARF1	transcript165.chr17.nic	protein_coding	1645597,1645178,1644834,1643442,1640448,1639912,1639639,1638806,1636709,1633865	1645732,1645239,1644935,1643967,1640666,1640040,1639742,1638926,1637062,1635617	Gene ID= ENSG00000074660.15 TPM= 2.9 Transcript Type= NA
chr17	1633858	1645747	1633858	1645747	-	ENST00000263071.8@SCARF1	ENST00000263071.8	protein_coding	1645597,1645178,1644834,1643442,1640448,1639912,1639639,1638806,1636941,1636709,1633858	1645747,1645239,1644935,1643967,1640666,1640040,1639742,1638926,1637062,1636855,1635617	Gene ID= ENSG00000074660.15 TPM= 23.17 Transcript Type= protein_coding
chr17	1646150	1650077	1646150	1650077	-	ENST00000301336.6@RILP	ENST00000301336.6	protein_coding	1649577,1649412,1649200,1648799,1648350,1647835,1646906,1646150	1650077,1649505,1649306,1649044,1648495,1647957,1646989,1646619	Gene ID= ENSG00000167705.11 TPM= 38.13 Transcript Type= protein_coding
chr17	1646145	1649833	1646145	1649833	-	transcript168.chr17.nic@RILP	transcript168.chr17.nic	protein_coding	1649577,1649412,1649200,1648799,1648350,1647835,1646145	1649833,1649505,1649306,1649044,1648495,1647957,1646619	Gene ID= ENSG00000167705.11 TPM= 4.83 Transcript Type= NA
chr17	1646150	1649519	1646150	1649519	-	transcript169.chr17.nic@RILP	transcript169.chr17.nic	protein_coding	1649412,1649200,1648799,1648350,1647835,1646906,1646150	1649519,1649306,1649044,1648495,1647957,1646989,1646619	Gene ID= ENSG00000167705.11 TPM= 9.17 Transcript Type= NA
chr17	1646145	1648918	1646145	1648918	-	transcript173.chr17.nnic@RILP	transcript173.chr17.nnic	protein_coding	1648799,1647835,1646145	1648918,1647957,1646619	Gene ID= ENSG00000167705.11 TPM= 3.86 Transcript Type= NA
chr17	1650629	1684882	1650629	1684882	-	ENST00000304992.10@PRPF8	ENST00000304992.10	protein_coding	1684780,1684472,1683533,1682129,1681820,1681478,1680929,1680726,1679609,1679291,1679017,1678762,1678518,1677565,1676976,1676505,1676207,1675928,1675620,1675152,1674442,1673746,1673357,1673081,1661906,1661611,1661271,1660993,1660698,1660432,1659841,1659357,1658526,1658253,1656648,1656392,1655350,1653777,1653542,1651648,1651414,1651108,1650629	1684882,1684582,1683701,1682293,1682038,1681690,1681054,1680831,1679799,1679410,1679206,1678881,1678652,1677694,1677172,1676711,1676370,1676054,1675812,1675339,1674680,1673892,1673567,1673197,1662153,1661790,1661406,1661162,1660827,1660578,1660001,1659548,1658763,1658381,1656761,1656565,1655543,1654016,1653683,1651788,1651553,1651310,1650956	Gene ID= ENSG00000174231.16 TPM= 107.15 Transcript Type= protein_coding
chr17	1650631	1684837	1650631	1684837	-	ENST00000572621.5@PRPF8	ENST00000572621.5	protein_coding	1684472,1683533,1682129,1681820,1681478,1680929,1680726,1679609,1679291,1679017,1678762,1678518,1677565,1676976,1676505,1676207,1675928,1675620,1675152,1674442,1673746,1673357,1673081,1661906,1661611,1661271,1660993,1660698,1660432,1659841,1659357,1658526,1658253,1656648,1656392,1655350,1653777,1653542,1651648,1651414,1651108,1650631	1684837,1683701,1682293,1682038,1681690,1681054,1680831,1679799,1679410,1679206,1678881,1678652,1677694,1677172,1676711,1676370,1676054,1675812,1675339,1674680,1673892,1673567,1673197,1662153,1661790,1661406,1661162,1660827,1660578,1660001,1659548,1658763,1658381,1656761,1656565,1655543,1654016,1653683,1651788,1651553,1651310,1650956	Gene ID= ENSG00000174231.16 TPM= 58.88 Transcript Type= protein_coding
chr17	1711505	1716205	1711505	1716205	-	transcript197.chr17.nic@MIR22HG	transcript197.chr17.nic	lincRNA	1716130,1714371,1711505	1716205,1714453,1714014	Gene ID= ENSG00000186594.14 TPM= 3.86 Transcript Type= NA
chr17	1724374	1738584	1724374	1738584	+	transcript210.chr17.nic@WDR81	transcript210.chr17.nic	protein_coding	1724374,1730380,1730755,1731068,1732325,1732666,1735572,1736039,1737365	1728626,1730487,1730945,1731258,1732490,1734216,1735717,1736218,1738584	Gene ID= ENSG00000167716.18 TPM= 21.24 Transcript Type= NA
chr17	1730504	1738584	1730504	1738584	+	transcript216.chr17.nic@WDR81	transcript216.chr17.nic	protein_coding	1730504,1731068,1732325,1732666,1733527,1735572,1736039,1737365	1730945,1731258,1732490,1732831,1734216,1735717,1736218,1738584	Gene ID= ENSG00000167716.18 TPM= 9.17 Transcript Type= NA
chr17	1724960	1738592	1724960	1738592	+	ENST00000409644.5@WDR81	ENST00000409644.5	protein_coding	1724960,1730380,1730755,1731068,1732325,1732666,1733527,1735572,1736039,1737365	1728626,1730487,1730945,1731258,1732490,1732831,1734216,1735717,1736218,1738592	Gene ID= ENSG00000167716.18 TPM= 44.89 Transcript Type= protein_coding
chr17	1744945	1755265	1744945	1755265	+	transcript211.chr17.nic@SERPINF2	transcript211.chr17.nic	protein_coding	1744945,1745175,1745333,1745708,1747019,1747309,1748598,1752586,1754122	1745058,1745213,1745395,1745909,1747162,1747512,1748740,1752790,1755265	Gene ID= ENSG00000167711.13 TPM= 6.76 Transcript Type= NA
chr17	1761959	1777574	1761959	1777574	+	ENST00000254722.8@SERPINF1	ENST00000254722.8	protein_coding	1761959,1766903,1769852,1771029,1771872,1775058,1776532,1777187	1762113,1766994,1770050,1771184,1772075,1775200,1776742,1777574	Gene ID= ENSG00000132386.10 TPM= 569.39 Transcript Type= protein_coding
chr17	1762805	1777565	1762805	1777565	+	transcript226.chr17.nic@SERPINF1	transcript226.chr17.nic	protein_coding	1762805,1766903,1769852,1771029,1771872,1775058,1776532,1777187	1762883,1766994,1770050,1771184,1772075,1775200,1776742,1777565	Gene ID= ENSG00000132386.10 TPM= 85.04 Transcript Type= NA
chr17	1782768	1829863	1782768	1829863	-	transcript253.chr17.nic@SMYD4	transcript253.chr17.nic	protein_coding	1829726,1827861,1811971,1804626,1799857,1787422,1786810,1784326,1783360,1782768	1829863,1828006,1812115,1804715,1801024,1787604,1786973,1784461,1783476,1783158	Gene ID= ENSG00000186532.11 TPM= 1.93 Transcript Type= NA
chr17	1827749	1829777	1827749	1829777	-	transcript260.chr17.nic@SMYD4	transcript260.chr17.nic	protein_coding	1829726,1827749	1829777,1828006	Gene ID= ENSG00000186532.11 TPM= 1.93 Transcript Type= NA
chr17	1779485	1829881	1779485	1829881	-	ENST00000305513.11@SMYD4	ENST00000305513.11	protein_coding	1829726,1827861,1811971,1804626,1799857,1787422,1786810,1784326,1783360,1783035,1779485	1829881,1828006,1812115,1804715,1801024,1787604,1786973,1784461,1783476,1783158,1781439	Gene ID= ENSG00000186532.11 TPM= 2.9 Transcript Type= protein_coding
chr17	1829948	1898071	1829948	1898071	+	transcript243.chr17.nic@RPA1	transcript243.chr17.nic	protein_coding	1829948,1842803,1843920,1844578,1853101,1872434,1875661,1877212,1878993,1879215,1879560,1880543,1883812,1891833,1895009,1897071	1830126,1842853,1843998,1844686,1853189,1872526,1875793,1877314,1879061,1879407,1879699,1880691,1883944,1891940,1895095,1898071	Gene ID= ENSG00000132383.11 TPM= 4.83 Transcript Type= NA
chr17	1829984	1899554	1829984	1899554	+	ENST00000254719.9@RPA1	ENST00000254719.9	protein_coding	1829984,1842803,1843920,1844578,1853101,1872434,1875661,1877212,1878993,1879215,1879560,1880543,1883812,1888675,1891833,1895009,1897071	1830126,1842853,1843998,1844686,1853189,1872526,1875793,1877314,1879061,1879407,1879699,1880691,1883944,1888851,1891940,1895095,1899554	Gene ID= ENSG00000132383.11 TPM= 13.51 Transcript Type= protein_coding
chr17	1934677	2025345	1934677	2025345	-	ENST00000331238.6@RTN4RL1	ENST00000331238.6	protein_coding	2024853,1934677	2025345,1937808	Gene ID= ENSG00000185924.6 TPM= 2.9 Transcript Type= protein_coding
chr17	2030148	2043424	2030148	2043424	+	transcript265.chr17.nnic@DPH1	transcript265.chr17.nnic	protein_coding	2030148,2033505,2033779,2035970,2036529,2036835,2039755,2040218,2040505,2041103,2041481,2041768,2042605	2030230,2033657,2033842,2036091,2036686,2036956,2039823,2040311,2040605,2041181,2041621,2041875,2043424	Gene ID= ENSG00000108963.17 TPM= 8.21 Transcript Type= NA
chr17	2030110	2043430	2030110	2043430	+	ENST00000263083.10@DPH1	ENST00000263083.10	protein_coding	2030110,2033505,2033779,2035970,2036529,2036835,2039755,2040218,2040505,2041103,2041481,2041768,2042605	2030230,2033657,2033842,2036091,2036686,2036956,2039823,2040374,2040605,2041181,2041621,2041875,2043430	Gene ID= ENSG00000108963.17 TPM= 31.37 Transcript Type= protein_coding
chr17	2055099	2059686	2055099	2059686	+	ENST00000399849.4@HIC1	ENST00000399849.4	protein_coding	2055099,2056671	2055238,2059686	Gene ID= ENSG00000177374.12 TPM= 27.03 Transcript Type= protein_coding
chr17	2322503	2337507	2322503	2337507	-	ENST00000301364.9@TSR1	ENST00000301364.9	protein_coding	2336331,2336037,2335511,2335260,2334472,2333557,2332961,2332169,2330947,2330515,2329343,2325304,2324689,2324504,2322503	2337507,2336140,2335730,2335394,2334896,2333716,2333124,2332359,2331109,2330625,2329475,2325420,2324829,2324578,2324374	Gene ID= ENSG00000167721.10 TPM= 8.52 Transcript Type= protein_coding
chr17	2337512	2381050	2337512	2381050	+	ENST00000268989.7@SGSM2	ENST00000268989.7	protein_coding	2337512,2343545,2361637,2362109,2362838,2362989,2363465,2364059,2364596,2364897,2365215,2367271,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432	2337745,2343620,2361799,2362270,2362905,2363134,2363599,2364183,2364663,2365057,2365341,2367405,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381050	Gene ID= ENSG00000141258.12 TPM= 8.21 Transcript Type= protein_coding
chr17	2337514	2381058	2337514	2381058	+	ENST00000426855.6@SGSM2	ENST00000426855.6	protein_coding	2337514,2343545,2361637,2362109,2362838,2362989,2363465,2364059,2364596,2364897,2365215,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432	2337745,2343620,2361799,2362270,2362905,2363134,2363599,2364183,2364663,2365057,2365341,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381058	Gene ID= ENSG00000141258.12 TPM= 6.27 Transcript Type= protein_coding
chr17	2384241	2386633	2384241	2386633	-	transcript310.chr17.nnic@NA	transcript310.chr17.nnic	NA	2384241	2386633	Gene ID= novel_gene_chr17_311 TPM= 4.83 Transcript Type= NA
chr17	2417059	2511916	2417059	2511916	-	transcript313.chr17.nnic@METTL16	transcript313.chr17.nnic	protein_coding	2511759,2502204,2477686,2473524,2467761,2464208,2441490,2438109,2420731,2418507,2417059	2511916,2502331,2477885,2473664,2467876,2464350,2441559,2438198,2420904,2420596,2417173	Gene ID= ENSG00000127804.12 TPM= 2.41 Transcript Type= NA
chr17	2417059	2511916	2417059	2511916	-	transcript315.chr17.nnic@METTL16	transcript315.chr17.nnic	protein_coding	2511759,2502204,2477686,2473524,2467761,2464208,2441490,2438109,2420731,2418968,2417059	2511916,2502331,2477885,2473664,2467876,2464350,2441559,2438198,2420904,2420596,2417177	Gene ID= ENSG00000127804.12 TPM= 2.41 Transcript Type= NA
chr17	2689386	2691164	2689386	2691164	-	transcript341.chr17.nnic@NA	transcript341.chr17.nnic	NA	2689386	2691164	Gene ID= novel_gene_chr17_342 TPM= 89.77 Transcript Type= NA
chr17	2692086	2693154	2692086	2693154	+	transcript339.chr17.nnic@NA	transcript339.chr17.nnic	NA	2692086	2693154	Gene ID= novel_gene_chr17_340 TPM= 2.9 Transcript Type= NA
chr17	3636468	3661538	3636468	3661538	+	ENST00000046640.7@CTNS	ENST00000046640.7	protein_coding	3636468,3637107,3640188,3647444,3648847,3654998,3655221,3656487,3656676,3658005,3659858,3660236	3636831,3637316,3640267,3647522,3648931,3655101,3655352,3656586,3656795,3658175,3659975,3661538	Gene ID= ENSG00000040531.14 TPM= 12.55 Transcript Type= protein_coding
chr17	3662895	3668617	3662895	3668617	-	transcript352.chr17.nnic@TAX1BP3	transcript352.chr17.nnic	protein_coding	3668488,3664679,3664195,3663659,3662895	3668617,3664798,3664272,3663885,3663563	Gene ID= ENSG00000213977.7 TPM= 6.76 Transcript Type= NA
chr17	3662902	3668682	3662902	3668682	-	ENST00000225525.3@TAX1BP3	ENST00000225525.3	protein_coding	3668488,3664679,3664195,3662902	3668682,3664798,3664272,3663885	Gene ID= ENSG00000213977.7 TPM= 3.86 Transcript Type= protein_coding
chr17	3668810	3671288	3668810	3671288	+	transcript381.chr17.nnic@NA	transcript381.chr17.nnic	NA	3668810	3671288	Gene ID= novel_gene_chr17_382 TPM= 1.93 Transcript Type= NA
chr17	3668815	3669665	3668815	3669665	+	ENST00000248378.5@EMC6	ENST00000248378.5	protein_coding	3668815,3669098	3668899,3669665	Gene ID= ENSG00000127774.6 TPM= 98.94 Transcript Type= protein_coding
chr17	3668822	3669668	3668822	3669668	+	ENST00000397133.2@EMC6	ENST00000397133.2	protein_coding	3668822,3669098	3669012,3669668	Gene ID= ENSG00000127774.6 TPM= 60.33 Transcript Type= protein_coding
chr17	3673227	3696404	3673227	3696404	-	ENST00000225328.9@P2RX5	ENST00000225328.9	protein_coding	3695869,3691644,3690956,3690605,3690427,3690070,3689492,3688626,3688012,3681896,3679590,3673227	3696404,3691794,3691027,3690680,3690523,3690150,3689630,3688759,3688105,3681978,3679784,3673877	Gene ID= ENSG00000083454.21 TPM= 18.34 Transcript Type= protein_coding
chr17	3672199	3696096	3672199	3696096	-	ENST00000552276.5@P2RX5	ENST00000552276.5	protein_coding	3695869,3691644,3690956,3690605,3690427,3690070,3689492,3688626,3688012,3681896,3679590,3672199	3696096,3691794,3691027,3690680,3690523,3690150,3689627,3688759,3688105,3681978,3679784,3672493	Gene ID= ENSG00000083454.21 TPM= 1.93 Transcript Type= protein_coding
chr17	3673245	3696216	3673245	3696216	-	ENST00000345901.7@P2RX5	ENST00000345901.7	protein_coding	3695869,3691644,3690605,3690427,3690070,3689492,3688626,3688012,3681896,3679590,3673245	3696216,3691794,3690680,3690523,3690150,3689630,3688759,3688105,3681978,3679784,3673877	Gene ID= ENSG00000083454.21 TPM= 2.9 Transcript Type= protein_coding
chr17	3695462	3699841	3695462	3699841	+	transcript377.chr17.nnic@NA	transcript377.chr17.nnic	NA	3695462,3698063	3695876,3699841	Gene ID= novel_gene_chr17_378 TPM= 6.76 Transcript Type= NA
chr17	3696549	3699243	3696549	3699243	+	transcript385.chr17.nnic@NA	transcript385.chr17.nnic	NA	3696549	3699243	Gene ID= novel_gene_chr17_386 TPM= 2.9 Transcript Type= NA
chr17	3714628	3723837	3714628	3723837	-	ENST00000572179.5@ITGAE	ENST00000572179.5	protein_coding	3723688,3720307,3716688,3714628	3723837,3720402,3716798,3714942	Gene ID= ENSG00000083457.11 TPM= 30.89 Transcript Type= processed_transcript
chr17	4004445	4143020	4004445	4143020	-	ENST00000381638.6@ZZEF1	ENST00000381638.6	protein_coding	4142542,4123907,4116972,4114299,4112609,4109653,4105693,4104633,4102317,4096609,4095831,4090719,4088678,4087434,4086486,4085670,4082437,4081376,4077883,4076868,4076637,4075263,4075097,4074150,4072608,4070684,4067163,4066447,4064361,4062753,4059171,4057994,4056216,4054057,4051971,4050781,4049708,4044224,4042429,4034015,4032828,4032126,4024919,4022709,4021129,4019669,4017836,4017371,4016323,4014347,4014090,4013449,4009604,4008883,4004445	4143020,4124051,4117166,4114470,4112808,4109863,4105809,4104811,4102415,4096700,4095979,4090830,4088893,4087534,4086655,4085803,4082504,4081490,4078042,4076989,4076759,4075429,4075178,4074351,4072756,4070924,4067242,4066540,4064829,4062917,4059290,4058155,4056345,4054195,4052136,4051043,4049859,4044374,4042568,4034292,4033002,4032258,4025118,4022828,4021320,4019769,4017971,4017730,4016466,4014515,4014188,4013614,4009757,4008954,4006970	Gene ID= ENSG00000074755.14 TPM= 20.27 Transcript Type= protein_coding
chr17	4143256	4157697	4143256	4157697	+	ENST00000301391.7@CYB5D2	ENST00000301391.7	protein_coding	4143256,4149891,4154674,4156866	4144005,4150031,4154860,4157697	Gene ID= ENSG00000167740.9 TPM= 2.9 Transcript Type= protein_coding
chr17	4269259	4366482	4269259	4366482	-	ENST00000396981.6@UBE2G1	ENST00000396981.6	protein_coding	4366271,4307021,4296717,4289230,4282798,4269259	4366482,4307123,4296814,4289408,4282921,4272516	Gene ID= ENSG00000132388.12 TPM= 22.2 Transcript Type= protein_coding
chr17	4271980	4366628	4271980	4366628	-	ENST00000572484.5@UBE2G1	ENST00000572484.5	protein_coding	4366271,4331774,4307021,4296717,4289230,4282798,4271980	4366628,4331888,4307123,4296814,4289408,4282921,4272516	Gene ID= ENSG00000132388.12 TPM= 3.86 Transcript Type= protein_coding
chr17	4498838	4539035	4498838	4539035	+	ENST00000329078.7@SPNS2	ENST00000329078.7	protein_coding	4498838,4513247,4525057,4530632,4531053,4532542,4532977,4533243,4533788,4536076,4536263,4536900,4537453	4499417,4513312,4525193,4530783,4531119,4532684,4533129,4533432,4533853,4536174,4536426,4536946,4539035	Gene ID= ENSG00000183018.8 TPM= 13.51 Transcript Type= protein_coding
chr17	4538897	4555386	4538897	4555386	-	ENST00000381556.6@MYBBP1A	ENST00000381556.6	protein_coding	4555127,4554861,4554195,4554019,4553810,4552451,4552125,4551880,4550058,4549332,4548524,4548143,4547958,4545846,4545610,4545259,4545026,4544751,4544489,4542913,4542616,4542464,4541784,4541463,4540348,4539439,4538897	4555386,4554956,4554278,4554093,4553917,4552626,4552292,4551997,4550353,4549442,4548649,4548310,4548057,4545942,4545761,4545345,4545175,4544921,4544646,4543165,4542741,4542532,4541891,4541564,4540484,4539967,4538975	Gene ID= ENSG00000132382.14 TPM= 16.89 Transcript Type= protein_coding
chr17	4538902	4555631	4538902	4555631	-	ENST00000254718.8@MYBBP1A	ENST00000254718.8	protein_coding	4555127,4554861,4554195,4554019,4553810,4552451,4552125,4551880,4550058,4549332,4548524,4548143,4547958,4545846,4545610,4545259,4545026,4544751,4544489,4542913,4542616,4542464,4541784,4541463,4540348,4538902	4555631,4554956,4554278,4554093,4553917,4552626,4552292,4551997,4550353,4549442,4548649,4548310,4548057,4545942,4545761,4545345,4545175,4544921,4544646,4543165,4542741,4542532,4541891,4541564,4540484,4539967	Gene ID= ENSG00000132382.14 TPM= 21.24 Transcript Type= protein_coding
chr17	4538902	4545592	4538902	4545592	-	transcript447.chr17.nic@MYBBP1A	transcript447.chr17.nic	protein_coding	4545259,4545026,4544751,4544489,4542913,4542616,4542464,4541784,4541463,4540348,4539439,4538902	4545592,4545175,4544921,4544646,4543165,4542741,4542532,4541891,4541564,4540484,4539967,4538975	Gene ID= ENSG00000132382.14 TPM= 19.31 Transcript Type= NA
chr17	4538902	4545592	4538902	4545592	-	transcript450.chr17.nic@MYBBP1A	transcript450.chr17.nic	protein_coding	4545259,4545026,4544751,4544489,4542913,4542616,4542464,4541784,4541463,4540348,4538902	4545592,4545175,4544921,4544646,4543165,4542741,4542532,4541891,4541564,4540484,4539967	Gene ID= ENSG00000132382.14 TPM= 17.38 Transcript Type= NA
chr17	4546914	4548470	4546914	4548470	-	transcript454.chr17.nnic@NA	transcript454.chr17.nnic	NA	4546914	4548470	Gene ID= novel_gene_chr17_455 TPM= 1.93 Transcript Type= NA
chr17	4584223	4608314	4584223	4608314	+	transcript479.chr17.nic@SMTNL2	transcript479.chr17.nic	protein_coding	4584223,4592361,4593822,4595145,4596860,4597172,4607361	4585004,4592448,4593897,4595327,4596977,4597323,4608314	Gene ID= ENSG00000188176.11 TPM= 264.84 Transcript Type= NA
chr17	4583999	4608319	4583999	4608319	+	ENST00000338859.8@SMTNL2	ENST00000338859.8	protein_coding	4583999,4592361,4592929,4593822,4595145,4596860,4597172,4607361	4584098,4592448,4593171,4593897,4595327,4596977,4597323,4608319	Gene ID= ENSG00000188176.11 TPM= 94.7 Transcript Type= protein_coding
chr17	4584539	4608314	4584539	4608314	+	ENST00000389313.8@SMTNL2	ENST00000389313.8	protein_coding	4584539,4592361,4592929,4593822,4595145,4596860,4597172,4607361	4585004,4592448,4593171,4593897,4595327,4596977,4597323,4608314	Gene ID= ENSG00000188176.11 TPM= 479.86 Transcript Type= protein_coding
chr17	4607415	4610680	4607415	4610680	+	transcript492.chr17.nnic@NA	transcript492.chr17.nnic	NA	4607415	4610680	Gene ID= novel_gene_chr17_493 TPM= 12.55 Transcript Type= NA
chr17	4731434	4733610	4731434	4733610	+	ENST00000293777.5@MED11	ENST00000293777.5	protein_coding	4731434,4731776,4733050	4731574,4731906,4733610	Gene ID= ENSG00000161920.9 TPM= 17.38 Transcript Type= protein_coding
chr17	4734286	4739922	4734286	4739922	-	ENST00000574412.5@CXCL16	ENST00000574412.5	protein_coding	4739261,4738782,4738408,4735092,4734286	4739922,4738920,4738490,4735508,4734652	Gene ID= ENSG00000161921.14 TPM= 1.93 Transcript Type= protein_coding
chr17	4733526	4739819	4733526	4739819	-	ENST00000293778.10@CXCL16	ENST00000293778.10	protein_coding	4739261,4738782,4738408,4735092,4734583,4733526	4739819,4738920,4738490,4735508,4734652,4734479	Gene ID= ENSG00000161921.14 TPM= 1.93 Transcript Type= protein_coding
chr17	4796144	4798503	4796144	4798503	+	ENST00000270586.7@PSMB6	ENST00000270586.7	protein_coding	4796144,4796728,4797438,4797682,4798009,4798280	4796296,4796795,4797569,4797811,4798153,4798503	Gene ID= ENSG00000142507.9 TPM= 924.77 Transcript Type= protein_coding
chr17	4807096	4823434	4807096	4823434	+	ENST00000263088.10@PLD2	ENST00000263088.10	protein_coding	4807096,4807772,4807984,4808274,4809100,4809298,4809493,4809691,4809877,4810802,4814418,4814633,4815476,4815764,4816620,4816937,4817146,4818002,4818297,4818494,4818774,4819084,4819429,4821793,4822640	4807225,4807881,4808114,4808416,4809205,4809363,4809551,4809783,4810029,4810951,4814501,4814711,4815586,4815934,4816746,4817055,4817259,4818106,4818385,4818607,4818823,4819218,4819582,4821907,4823434	Gene ID= ENSG00000129219.13 TPM= 2.9 Transcript Type= protein_coding
chr17	4807133	4811305	4807133	4811305	+	transcript522.chr17.nic@PLD2	transcript522.chr17.nic	protein_coding	4807133,4807772,4807984,4808274,4809100,4809298,4809493,4809691,4809877,4810802	4807225,4807881,4808114,4808416,4809205,4809363,4809551,4809783,4810029,4811305	Gene ID= ENSG00000129219.13 TPM= 3.86 Transcript Type= NA
chr17	4937130	4940251	4937130	4940251	-	ENST00000225665.11@SLC25A11	ENST00000225665.11	protein_coding	4939816,4939060,4938769,4938512,4938339,4938154,4938023,4937130	4940251,4939212,4938975,4938602,4938429,4938253,4938074,4937896	Gene ID= ENSG00000108528.13 TPM= 28.96 Transcript Type= protein_coding
chr17	4937317	4940030	4937317	4940030	-	ENST00000574710.1@SLC25A11	ENST00000574710.1	protein_coding	4938769,4938512,4938339,4938154,4938023,4937317	4940030,4938602,4938429,4938253,4938074,4937896	Gene ID= ENSG00000108528.13 TPM= 83.02 Transcript Type= retained_intron
chr17	4940093	4945222	4940093	4945222	+	transcript525.chr17.nic@RNF167	transcript525.chr17.nic	protein_coding	4940093,4940487,4940923,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940360,4940726,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 9.65 Transcript Type= NA
chr17	4951095	4957131	4951095	4957131	+	ENST00000323997.10@ENO3	ENST00000323997.10	protein_coding	4951095,4951828,4952795,4953051,4953272,4953712,4955075,4955407,4955942,4956573,4956831,4956978	4951224,4951914,4952890,4953109,4953341,4953845,4955297,4955604,4956143,4956681,4956889,4957131	Gene ID= ENSG00000108515.17 TPM= 1685.22 Transcript Type= protein_coding
chr17	4951080	4953845	4951080	4953845	+	ENST00000521811.5@ENO3	ENST00000521811.5	protein_coding	4951080,4951721,4952795,4953051,4953272,4953712	4951182,4951914,4952890,4953109,4953341,4953845	Gene ID= ENSG00000108515.17 TPM= 1.45 Transcript Type= protein_coding
chr17	4951119	4957127	4951119	4957127	+	ENST00000519584.5@ENO3	ENST00000519584.5	protein_coding	4951119,4951828,4952795,4953712,4955075,4955407,4955942,4956573,4956831,4956978	4951182,4951914,4952890,4953845,4955297,4955604,4956143,4956681,4956889,4957127	Gene ID= ENSG00000108515.17 TPM= 62.7 Transcript Type= protein_coding
chr17	4951758	4957118	4951758	4957118	+	ENST00000518175.1@ENO3	ENST00000518175.1	protein_coding	4951758,4952795,4953051,4953272,4953712,4955075,4955407,4955942,4956573,4956831,4956978	4951914,4952890,4953109,4953341,4953845,4955297,4955604,4956143,4956681,4956889,4957118	Gene ID= ENSG00000108515.17 TPM= 37.07 Transcript Type= protein_coding
chr17	4959228	4967872	4959228	4967872	-	ENST00000206020.7@SPAG7	ENST00000206020.7	protein_coding	4967720,4960786,4960459,4960234,4960022,4959760,4959228	4967872,4960853,4960547,4960318,4960111,4959916,4959643	Gene ID= ENSG00000091640.7 TPM= 87.2 Transcript Type= protein_coding
chr17	4959226	4967790	4959226	4967790	-	ENST00000575142.5@SPAG7	ENST00000575142.5	protein_coding	4967720,4960786,4960459,4960234,4960022,4959226	4967790,4960853,4960547,4960318,4960111,4959916	Gene ID= ENSG00000091640.7 TPM= 20.59 Transcript Type= protein_coding
chr17	4967535	4968151	4967535	4968151	+	transcript627.chr17.nnic@NA	transcript627.chr17.nnic	NA	4967535	4968151	Gene ID= novel_gene_chr17_628 TPM= 2.9 Transcript Type= NA
chr17	4967997	4977150	4967997	4977150	-	transcript580.chr17.nic@CAMTA2	transcript580.chr17.nic	protein_coding	4977058,4974385,4973585,4973175,4972769,4972232,4970340,4969902,4969630,4969150,4968907,4967997	4977150,4974500,4973769,4973253,4972991,4972536,4970536,4970085,4969701,4969337,4968981,4968819	Gene ID= ENSG00000108509.20 TPM= 49.23 Transcript Type= NA
chr17	4988130	4998175	4988130	4998175	-	transcript681.chr17.nnic@INCA1	transcript681.chr17.nnic	protein_coding	4997496,4995806,4994394,4990152,4989890,4989428,4988779,4988130	4998175,4995930,4994475,4990265,4989929,4989624,4988944,4988554	Gene ID= ENSG00000196388.8 TPM= 2.9 Transcript Type= NA
chr17	4997767	5024703	4997767	5024703	+	transcript635.chr17.nic@KIF1C	transcript635.chr17.nic	protein_coding	4997767,4999013,4999850,5000220,5000772,5001222,5002059,5002464,5002731,5003612,5003851,5003998,5004567,5004855,5006915,5007263,5007467,5013653,5014743,5019996,5020492,5020806,5022092,5023468	4998156,4999046,4999970,5000352,5000848,5001401,5002124,5002642,5002842,5003689,5003916,5004073,5004645,5005000,5007084,5007342,5007542,5013732,5014837,5020079,5020678,5020878,5022709,5024703	Gene ID= ENSG00000129250.11 TPM= 69.36 Transcript Type= NA
chr17	4997948	5028401	4997948	5028401	+	ENST00000320785.9@KIF1C	ENST00000320785.9	protein_coding	4997948,4999850,5000220,5000772,5001222,5002059,5002464,5002731,5003612,5003851,5003998,5004567,5004855,5006915,5007263,5007467,5013653,5014743,5019996,5020492,5020806,5022092,5023468	4998156,4999970,5000352,5000848,5001401,5002124,5002642,5002842,5003689,5003916,5004073,5004645,5005000,5007084,5007342,5007542,5013732,5014837,5020079,5020678,5020878,5022709,5028401	Gene ID= ENSG00000129250.11 TPM= 53.16 Transcript Type= protein_coding
chr17	5078248	5096374	5078248	5096374	+	ENST00000318833.3@ZFP3	ENST00000318833.3	protein_coding	5078248,5091497	5078575,5096374	Gene ID= ENSG00000180787.5 TPM= 19.31 Transcript Type= protein_coding
chr17	5105734	5111886	5105734	5111886	-	transcript685.chr17.nic@ZNF232	transcript685.chr17.nic	protein_coding	5111800,5111076,5109394,5108926,5105734	5111886,5111219,5109868,5109052,5106506	Gene ID= ENSG00000167840.13 TPM= 2.9 Transcript Type= NA
chr17	5105734	5111886	5105734	5111886	-	transcript687.chr17.nic@ZNF232	transcript687.chr17.nic	protein_coding	5111800,5111076,5108926,5105734	5111886,5111219,5109868,5106506	Gene ID= ENSG00000167840.13 TPM= 4.83 Transcript Type= NA
chr17	5105735	5111886	5105735	5111886	-	transcript688.chr17.nic@ZNF232	transcript688.chr17.nic	protein_coding	5111800,5111076,5108926,5105735	5111886,5111219,5109768,5106533	Gene ID= ENSG00000167840.13 TPM= 2.25 Transcript Type= NA
chr17	5105735	5111911	5105735	5111911	-	transcript693.chr17.nic@ZNF232	transcript693.chr17.nic	protein_coding	5111800,5108926,5105735	5111911,5109868,5106533	Gene ID= ENSG00000167840.13 TPM= 2.25 Transcript Type= NA
chr17	5105773	5111845	5105773	5111845	-	ENST00000573015.5@ZNF232	ENST00000573015.5	protein_coding	5111800,5111076,5109394,5108926,5105773	5111845,5111219,5109868,5109052,5106533	Gene ID= ENSG00000167840.13 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr17	5111932	5114377	5111932	5114377	+	ENST00000413077.1@AC012146.1	ENST00000413077.1	processed_transcript	5111932,5113386,5114158	5112118,5113452,5114377	Gene ID= ENSG00000234327.7 TPM= 8.69 Transcript Type= antisense_RNA
chr17	5282259	5336689	5282259	5336689	+	transcript756.chr17.nic@RABEP1	transcript756.chr17.nic	protein_coding	5282259,5308694,5331949,5335184,5336488	5282520,5308822,5332152,5335344,5336689	Gene ID= ENSG00000029725.16 TPM= 10.62 Transcript Type= NA
chr17	5282300	5385812	5282300	5385812	+	ENST00000537505.5@RABEP1	ENST00000537505.5	protein_coding	5282300,5308694,5331949,5335184,5338019,5346790,5350451,5354359,5361208,5362912,5365122,5368370,5373314,5377116,5378177,5380364,5381389,5383122	5282520,5308822,5332152,5335344,5338138,5346925,5350629,5354490,5361675,5363016,5365238,5368468,5373454,5377305,5378232,5380462,5381505,5385812	Gene ID= ENSG00000029725.16 TPM= 60.81 Transcript Type= protein_coding
chr17	5282281	5284987	5282281	5284987	+	transcript764.chr17.nnic@NA	transcript764.chr17.nnic	NA	5282281	5284987	Gene ID= novel_gene_chr17_765 TPM= 1.93 Transcript Type= NA
chr17	5386026	5420160	5386026	5420160	-	ENST00000573584.5@NUP88	ENST00000573584.5	protein_coding	5419354,5416513,5414009,5410703,5408733,5405057,5404099,5399552,5394891,5391561,5388802,5387779,5387605,5387386,5386984,5386708,5386026	5420160,5416682,5414134,5410789,5408909,5405243,5404246,5399650,5394981,5391662,5388960,5387904,5387670,5387466,5387110,5386826,5386269	Gene ID= ENSG00000108559.11 TPM= 17.38 Transcript Type= protein_coding
chr17	5419641	5432876	5419641	5432876	+	ENST00000381209.7@RPAIN	ENST00000381209.7	protein_coding	5419641,5421296,5422769,5425971,5426236,5428071,5432542	5420291,5421466,5422829,5426082,5426299,5428211,5432876	Gene ID= ENSG00000129197.14 TPM= 34.94 Transcript Type= protein_coding
chr17	5419641	5432876	5419641	5432876	+	ENST00000381208.9@RPAIN	ENST00000381208.9	protein_coding	5419641,5421296,5422769,5425971,5426236,5432542	5420291,5421466,5422829,5426082,5426299,5432876	Gene ID= ENSG00000129197.14 TPM= 13.71 Transcript Type= protein_coding
chr17	5419641	5432876	5419641	5432876	+	ENST00000539417.6@RPAIN	ENST00000539417.6	protein_coding	5419641,5421296,5422769,5425971,5428071,5432542	5420291,5421466,5422829,5426082,5428211,5432876	Gene ID= ENSG00000129197.14 TPM= 11.78 Transcript Type= nonsense_mediated_decay
chr17	5419641	5432876	5419641	5432876	+	ENST00000573577.5@RPAIN	ENST00000573577.5	protein_coding	5419641,5421296,5422769,5426236,5432542	5420291,5421466,5422829,5426299,5432876	Gene ID= ENSG00000129197.14 TPM= 10.81 Transcript Type= nonsense_mediated_decay
chr17	5419641	5432876	5419641	5432876	+	ENST00000575599.5@RPAIN	ENST00000575599.5	protein_coding	5419641,5421296,5422769,5428071,5432542	5420291,5421466,5422829,5428211,5432876	Gene ID= ENSG00000129197.14 TPM= 9.85 Transcript Type= nonsense_mediated_decay
chr17	5419641	5432715	5419641	5432715	+	ENST00000536255.6@RPAIN	ENST00000536255.6	protein_coding	5419641,5421296,5422769,5432542	5420291,5421466,5422829,5432715	Gene ID= ENSG00000129197.14 TPM= 11.58 Transcript Type= protein_coding
chr17	5432777	5439155	5432777	5439155	-	ENST00000225698.8@C1QBP	ENST00000225698.8	protein_coding	5438842,5438123,5434873,5433669,5433293,5432777	5439155,5438273,5434966,5433767,5433415,5433164	Gene ID= ENSG00000108561.8 TPM= 329.17 Transcript Type= protein_coding
chr17	5471251	5486203	5471251	5486203	-	transcript790.chr17.nnic@DERL2	transcript790.chr17.nnic	protein_coding	5486069,5485151,5482809,5481296,5480387,5480054,5477848,5471251	5486203,5485216,5482882,5481389,5480582,5480144,5477999,5474789	Gene ID= ENSG00000072849.10 TPM= 3.86 Transcript Type= NA
chr17	5471251	5486217	5471251	5486217	-	ENST00000158771.8@DERL2	ENST00000158771.8	protein_coding	5486069,5485151,5482809,5481296,5480387,5480054,5471251	5486217,5485216,5482882,5481389,5480582,5480144,5474789	Gene ID= ENSG00000072849.10 TPM= 7.72 Transcript Type= protein_coding
chr17	5474293	5486203	5474293	5486203	-	transcript793.chr17.nnic@DERL2	transcript793.chr17.nnic	protein_coding	5486069,5485151,5482809,5480387,5480054,5477848,5474293	5486203,5485216,5482882,5480582,5480144,5477999,5474789	Gene ID= ENSG00000072849.10 TPM= 2.9 Transcript Type= NA
chr17	5486374	5490808	5486374	5490808	+	ENST00000611091.4@MIS12	ENST00000611091.4	protein_coding	5486374,5488196,5488823	5486684,5488589,5490808	Gene ID= ENSG00000167842.15 TPM= 6.76 Transcript Type= protein_coding
chr17	5486570	5490808	5486570	5490808	+	transcript808.chr17.nic@MIS12	transcript808.chr17.nic	protein_coding	5486570,5488823	5488589,5490808	Gene ID= ENSG00000167842.15 TPM= 8.69 Transcript Type= NA
chr17	5486927	5490814	5486927	5490814	+	ENST00000381165.3@MIS12	ENST00000381165.3	protein_coding	5486927,5488196,5488823	5487045,5488589,5490814	Gene ID= ENSG00000167842.15 TPM= 1.93 Transcript Type= protein_coding
chr17	6640758	6644541	6640758	6644541	+	ENST00000250101.9@TXNDC17	ENST00000250101.9	protein_coding	6640758,6641753,6642249,6642951	6641227,6641834,6642324,6644541	Gene ID= ENSG00000129235.10 TPM= 27.99 Transcript Type= protein_coding
chr17	6641016	6643114	6641016	6643114	+	ENST00000570330.5@TXNDC17	ENST00000570330.5	protein_coding	6641016,6641753,6642249,6642951	6641152,6641834,6642324,6643114	Gene ID= ENSG00000129235.10 TPM= 11.58 Transcript Type= protein_coding
chr17	6640985	6643067	6640985	6643067	+	ENST00000576020.5@TXNDC17	ENST00000576020.5	protein_coding	6640985,6641753,6642249,6642951	6641100,6641834,6642324,6643067	Gene ID= ENSG00000129235.10 TPM= 1.93 Transcript Type= processed_transcript
chr17	6643315	6651634	6643315	6651634	-	ENST00000225728.7@MED31	ENST00000225728.7	protein_coding	6651501,6650356,6649982,6643315	6651634,6650433,6650078,6644659	Gene ID= ENSG00000108590.10 TPM= 14.48 Transcript Type= protein_coding
chr17	7009456	7012334	7009456	7012334	-	transcript833.chr17.nic@ALOX12-AS1	transcript833.chr17.nic	antisense_RNA	7012196,7009456	7012334,7009889	Gene ID= ENSG00000215067.9 TPM= 1.93 Transcript Type= NA
chr17	7012417	7014532	7012417	7014532	+	ENST00000548577.5@RNASEK	ENST00000548577.5	protein_coding	7012417,7013666,7014145	7012761,7013742,7014532	Gene ID= ENSG00000219200.11 TPM= 138.04 Transcript Type= protein_coding
chr17	7012632	7014532	7012632	7014532	+	ENST00000552039.2@RNASEK	ENST00000552039.2	protein_coding	7012632,7013666,7014145	7012757,7013742,7014532	Gene ID= ENSG00000219200.11 TPM= 25.1 Transcript Type= protein_coding
chr17	7012646	7014532	7012646	7014532	+	ENST00000552176.2@RNASEK	ENST00000552176.2	protein_coding	7012646,7014145	7013742,7014532	Gene ID= ENSG00000219200.11 TPM= 1.93 Transcript Type= retained_intron
chr17	7012622	7014330	7012622	7014330	+	ENST00000570898.1@RNASEK	ENST00000570898.1	protein_coding	7012622,7013644,7014145	7012761,7013742,7014330	Gene ID= ENSG00000219200.11 TPM= 1.93 Transcript Type= protein_coding
chr17	7012660	7017520	7012660	7017520	+	ENST00000547863.5@RNASEK-C17orf49	ENST00000547863.5	protein_coding	7012660,7013666,7014145,7015062,7015774,7016495,7016910,7017261	7012757,7013742,7014878,7015156,7015875,7016685,7017014,7017520	Gene ID= ENSG00000161939.19 TPM= 22.2 Transcript Type= retained_intron
chr17	7014753	7017506	7014753	7017506	+	ENST00000546760.5@C17orf49	ENST00000546760.5	protein_coding	7014753,7015062,7015774,7016495,7017257	7014878,7015156,7015875,7016685,7017506	Gene ID= ENSG00000258315.5 TPM= 7.72 Transcript Type= protein_coding
chr17	7014782	7017520	7014782	7017520	+	ENST00000439424.6@C17orf49	ENST00000439424.6	protein_coding	7014782,7015062,7015774,7016495,7016910,7017261	7014878,7015156,7015875,7016685,7017014,7017520	Gene ID= ENSG00000258315.5 TPM= 11.1 Transcript Type= protein_coding
chr17	7014769	7017519	7014769	7017519	+	ENST00000552402.5@C17orf49	ENST00000552402.5	protein_coding	7014769,7015062,7016495,7016910,7017261	7014878,7015156,7016685,7017014,7017519	Gene ID= ENSG00000258315.5 TPM= 1.45 Transcript Type= protein_coding
chr17	7015818	7019630	7015818	7019630	-	ENST00000443997.1@MIR497HG	ENST00000443997.1	antisense_RNA	7019378,7017069,7015818	7019630,7017388,7016014	Gene ID= ENSG00000267532.5 TPM= 1.93 Transcript Type= antisense_RNA
chr17	7023020	7029642	7023020	7029642	+	ENST00000293805.9@BCL6B	ENST00000293805.9	protein_coding	7023020,7023660,7024083,7024401,7025076,7026457,7026705,7026950,7027503	7023099,7023850,7024304,7024763,7025200,7026621,7026835,7027087,7029642	Gene ID= ENSG00000161940.10 TPM= 2.9 Transcript Type= protein_coding
chr17	7074796	7080283	7074796	7080283	-	ENST00000571664.1@CLEC10A	ENST00000571664.1	protein_coding	7080052,7078746,7077997,7076892,7076733,7075976,7075731,7075360,7074796	7080283,7078885,7078113,7076987,7076804,7076071,7075885,7075466,7075222	Gene ID= ENSG00000132514.13 TPM= 1.93 Transcript Type= protein_coding
chr17	7219806	7225273	7219806	7225273	+	ENST00000356839.9@ACADVL	ENST00000356839.9	protein_coding	7219806,7220122,7220464,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223133,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220046,7220197,7220529,7220676,7220830,7221058,7221682,7222081,7222302,7222865,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225273	Gene ID= ENSG00000072778.19 TPM= 1416.03 Transcript Type= protein_coding
chr17	7219863	7225264	7219863	7225264	+	ENST00000350303.9@ACADVL	ENST00000350303.9	protein_coding	7219863,7220122,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223133,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220046,7220197,7220676,7220830,7221058,7221682,7222081,7222302,7222865,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225264	Gene ID= ENSG00000072778.19 TPM= 46.55 Transcript Type= protein_coding
chr17	7219844	7225265	7219844	7225265	+	ENST00000322910.9@ACADVL	ENST00000322910.9	protein_coding	7219844,7220464,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223133,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220197,7220529,7220676,7220830,7221058,7221682,7222081,7222302,7222865,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225265	Gene ID= ENSG00000072778.19 TPM= 77.54 Transcript Type= nonsense_mediated_decay
chr17	7224489	7225266	7224489	7225266	+	ENST00000583848.5@ACADVL	ENST00000583848.5	protein_coding	7224489,7224662,7224809,7224957	7224552,7224714,7224884,7225266	Gene ID= ENSG00000072778.19 TPM= 8.77 Transcript Type= nonsense_mediated_decay
chr17	7225341	7234545	7225341	7234545	-	ENST00000005340.9@DVL2	ENST00000005340.9	protein_coding	7234069,7230728,7230285,7230046,7229808,7229588,7229378,7229135,7228969,7227977,7227655,7227404,7227090,7226421,7225341	7234545,7230797,7230430,7230155,7229943,7229678,7229447,7229274,7229045,7228044,7227783,7227535,7227269,7226639,7226313	Gene ID= ENSG00000004975.11 TPM= 13.51 Transcript Type= protein_coding
chr17	7225341	7234531	7225341	7234531	-	transcript933.chr17.nic@DVL2	transcript933.chr17.nic	protein_coding	7234069,7230728,7230285,7230046,7229808,7229588,7229378,7229135,7228969,7227977,7227655,7227404,7226421,7225341	7234531,7230797,7230430,7230155,7229943,7229678,7229447,7229274,7229045,7228044,7227783,7227535,7227269,7226313	Gene ID= ENSG00000004975.11 TPM= 3.86 Transcript Type= NA
chr17	7235028	7239506	7235028	7239506	-	ENST00000320316.7@PHF23	ENST00000320316.7	protein_coding	7239246,7237629,7237385,7235930,7235028	7239506,7237660,7237477,7236767,7235840	Gene ID= ENSG00000040633.12 TPM= 15.44 Transcript Type= protein_coding
chr17	7235029	7239439	7235029	7239439	-	ENST00000571362.5@PHF23	ENST00000571362.5	protein_coding	7239246,7237629,7237385,7235930,7235029	7239439,7237660,7237477,7236566,7235840	Gene ID= ENSG00000040633.12 TPM= 8.69 Transcript Type= protein_coding
chr17	7243591	7251675	7243591	7251675	-	ENST00000574322.5@CTDNEP1	ENST00000574322.5	protein_coding	7251195,7247277,7247064,7246791,7246254,7246026,7244551,7243591	7251675,7247343,7247182,7246862,7246370,7246137,7244635,7244245	Gene ID= ENSG00000175826.11 TPM= 130.32 Transcript Type= protein_coding
chr17	7243618	7252081	7243618	7252081	-	ENST00000573600.5@CTDNEP1	ENST00000573600.5	protein_coding	7251965,7251195,7247277,7247064,7246791,7246254,7246026,7244551,7243618	7252081,7251601,7247343,7247182,7246862,7246370,7246137,7244635,7244245	Gene ID= ENSG00000175826.11 TPM= 11.58 Transcript Type= protein_coding
chr17	7252053	7259931	7252053	7259931	+	ENST00000354429.6@ELP5	ENST00000354429.6	protein_coding	7252053,7252426,7252770,7252918,7254583,7256857,7258588,7258826,7259571	7252082,7252596,7252830,7252998,7254803,7257038,7258683,7258926,7259931	Gene ID= ENSG00000170291.14 TPM= 1.93 Transcript Type= protein_coding
chr17	7252056	7254913	7252056	7254913	+	ENST00000574255.5@ELP5	ENST00000574255.5	protein_coding	7252056,7252426,7252770,7252918,7254583	7252082,7252596,7252830,7252998,7254913	Gene ID= ENSG00000170291.14 TPM= 13.51 Transcript Type= protein_coding
chr17	7252286	7259940	7252286	7259940	+	ENST00000396628.6@ELP5	ENST00000396628.6	protein_coding	7252286,7252770,7252918,7254583,7256857,7258588,7258826,7259571	7252596,7252830,7252998,7254803,7257038,7258683,7258926,7259940	Gene ID= ENSG00000170291.14 TPM= 16.41 Transcript Type= protein_coding
chr17	7252376	7254906	7252376	7254906	+	ENST00000573657.5@ELP5	ENST00000573657.5	protein_coding	7252376,7252770,7252918,7254583	7252596,7252830,7252998,7254906	Gene ID= ENSG00000170291.14 TPM= 4.83 Transcript Type= protein_coding
chr17	7281736	7286151	7281736	7286151	+	ENST00000571308.5@SLC2A4	ENST00000571308.5	protein_coding	7281736,7283245,7283473,7283738,7283974,7284217,7284485,7284835,7285088,7285705	7281967,7283361,7283645,7283862,7284089,7284379,7284672,7284939,7285189,7286151	Gene ID= ENSG00000181856.14 TPM= 3.86 Transcript Type= protein_coding
chr17	7287269	7289234	7287269	7289234	+	transcript986.chr17.nnic@NA	transcript986.chr17.nnic	NA	7287269	7289234	Gene ID= novel_gene_chr17_987 TPM= 3.86 Transcript Type= NA
chr17	7307373	7312455	7307373	7312455	+	ENST00000336458.12@EIF5A	ENST00000336458.12	protein_coding	7307373,7309615,7311018,7311350,7311578,7311822	7307752,7309800,7311122,7311481,7311651,7312455	Gene ID= ENSG00000132507.17 TPM= 517.99 Transcript Type= protein_coding
chr17	7307974	7312455	7307974	7312455	+	ENST00000419711.6@EIF5A	ENST00000419711.6	protein_coding	7307974,7309615,7311018,7311350,7311578,7311822	7308113,7309800,7311122,7311481,7311651,7312455	Gene ID= ENSG00000132507.17 TPM= 83.6 Transcript Type= protein_coding
chr17	7306999	7312463	7306999	7312463	+	ENST00000336452.11@EIF5A	ENST00000336452.11	protein_coding	7306999,7309615,7311018,7311350,7311578,7311822	7307115,7309800,7311122,7311481,7311651,7312463	Gene ID= ENSG00000132507.17 TPM= 57.82 Transcript Type= protein_coding
chr17	7308371	7312455	7308371	7312455	+	ENST00000416016.2@EIF5A	ENST00000416016.2	protein_coding	7308371,7309615,7311018,7311350,7311578,7311822	7308575,7309800,7311122,7311481,7311651,7312455	Gene ID= ENSG00000132507.17 TPM= 50.78 Transcript Type= protein_coding
chr17	7312660	7315343	7312660	7315343	-	ENST00000389167.9@GPS2	ENST00000389167.9	protein_coding	7314959,7314488,7314291,7314080,7313906,7313568,7313380,7313212,7313029,7312660	7315343,7314597,7314403,7314159,7313988,7313721,7313469,7313291,7313124,7312839	Gene ID= ENSG00000132522.15 TPM= 84.15 Transcript Type= protein_coding
chr17	7314548	7315360	7314548	7315360	-	transcript1018.chr17.nic@AC026954.2	transcript1018.chr17.nic	protein_coding	7314959,7314548	7315360,7314597	Gene ID= ENSG00000261915.6 TPM= 7.72 Transcript Type= NA
chr17	7315628	7329335	7315628	7329335	-	transcript1024.chr17.nnic@NEURL4	transcript1024.chr17.nnic	protein_coding	7329031,7327440,7326711,7326437,7326255,7325641,7325209,7324799,7324395,7324108,7323814,7323647,7323485,7322948,7322735,7321865,7321560,7321361,7321112,7320759,7319050,7318269,7318065,7317788,7317461,7317205,7315628	7329335,7327884,7327009,7326548,7326343,7325713,7325473,7324980,7324480,7324270,7324012,7323723,7323563,7323123,7322866,7322010,7321787,7321459,7321273,7320923,7319208,7318356,7318172,7317932,7317573,7317370,7316327	Gene ID= ENSG00000215041.9 TPM= 9.17 Transcript Type= NA
chr17	7315628	7329328	7315628	7329328	-	ENST00000399464.6@NEURL4	ENST00000399464.6	protein_coding	7329031,7327440,7327165,7326711,7326437,7326255,7325641,7325209,7324799,7324395,7324108,7323814,7323647,7323485,7322948,7322735,7321865,7321560,7321361,7321112,7320759,7319050,7318495,7318269,7318065,7317788,7317461,7317205,7315628	7329328,7327884,7327230,7327009,7326548,7326343,7325713,7325473,7324980,7324480,7324270,7324012,7323723,7323563,7323123,7322866,7322010,7321787,7321459,7321273,7320923,7319208,7318674,7318356,7318172,7317932,7317573,7317370,7316327	Gene ID= ENSG00000215041.9 TPM= 23.65 Transcript Type= protein_coding
chr17	7336529	7351478	7336529	7351478	+	ENST00000158762.7@ACAP1	ENST00000158762.7	protein_coding	7336529,7337312,7341948,7342275,7342416,7343379,7343706,7343861,7344049,7344539,7346244,7346391,7346808,7347031,7347922,7348127,7348306,7348995,7349945,7350127,7350950,7351295	7336787,7337369,7342067,7342328,7342474,7343562,7343750,7343956,7344123,7344648,7346295,7346491,7346931,7347242,7347991,7348221,7348475,7349167,7350054,7350237,7350999,7351478	Gene ID= ENSG00000072818.11 TPM= 1.45 Transcript Type= protein_coding
chr17	7350317	7351476	7350317	7351476	+	ENST00000571471.5@ACAP1	ENST00000571471.5	protein_coding	7350317,7350950,7351295	7350404,7350999,7351476	Gene ID= ENSG00000072818.11 TPM= 1.45 Transcript Type= protein_coding
chr17	7350591	7352104	7350591	7352104	-	transcript1032.chr17.nnic@NA	transcript1032.chr17.nnic	NA	7350591	7352104	Gene ID= novel_gene_chr17_1033 TPM= 10.62 Transcript Type= NA
chr17	7352162	7354944	7352162	7354944	+	ENST00000333751.4@KCTD11	ENST00000333751.4	protein_coding	7352162	7354944	Gene ID= ENSG00000213859.4 TPM= 1.93 Transcript Type= protein_coding
chr17	7382922	7389774	7382922	7389774	+	transcript1036.chr17.nic@TNK1	transcript1036.chr17.nic	protein_coding	7382922,7383228,7383425,7383709,7383970,7384484,7386561,7386990,7387378,7388406,7388788,7388971	7383089,7383320,7383616,7383864,7384253,7384754,7386655,7387154,7387457,7388704,7388883,7389774	Gene ID= ENSG00000174292.12 TPM= 1.93 Transcript Type= NA
chr17	7389727	7394570	7389727	7394570	-	ENST00000324822.15@PLSCR3	ENST00000324822.15	protein_coding	7394477,7394104,7393601,7393467,7393144,7392791,7390634,7389727	7394570,7394159,7393836,7393509,7393364,7392952,7390795,7390441	Gene ID= ENSG00000187838.16 TPM= 7.72 Transcript Type= protein_coding
chr17	7389730	7394843	7389730	7394843	-	ENST00000535512.5@PLSCR3	ENST00000535512.5	protein_coding	7394477,7394104,7393601,7393467,7393144,7392791,7390634,7389730	7394843,7394267,7393836,7393509,7393364,7392952,7390795,7390441	Gene ID= ENSG00000187838.16 TPM= 13.03 Transcript Type= protein_coding
chr17	7389730	7394508	7389730	7394508	-	ENST00000571541.5@PLSCR3	ENST00000571541.5	protein_coding	7393601,7393144,7392791,7390634,7389730	7394508,7393509,7392952,7390795,7390441	Gene ID= ENSG00000187838.16 TPM= 5.31 Transcript Type= retained_intron
chr17	7402975	7404134	7402975	7404134	-	transcript1046.chr17.nnic@TMEM256	transcript1046.chr17.nnic	protein_coding	7404000,7403613,7403310,7402975	7404134,7403689,7403390,7403209	Gene ID= ENSG00000205544.3 TPM= 1.93 Transcript Type= NA
chr17	7402975	7404137	7402975	7404137	-	ENST00000302422.3@TMEM256	ENST00000302422.3	protein_coding	7404000,7403658,7403310,7402975	7404137,7403689,7403390,7403209	Gene ID= ENSG00000205544.3 TPM= 33.79 Transcript Type= protein_coding
chr17	7435687	7440912	7435687	7440912	-	transcript1051.chr17.nnic@AC113189.3	transcript1051.chr17.nnic	antisense_RNA	7440847,7435687	7440912,7436670	Gene ID= ENSG00000263301.1 TPM= 1.93 Transcript Type= NA
chr17	7439027	7444937	7439027	7444937	+	ENST00000293829.8@FGF11	ENST00000293829.8	protein_coding	7439027,7441471,7441776,7442594,7443076	7439813,7441581,7441879,7442792,7444937	Gene ID= ENSG00000161958.10 TPM= 5.79 Transcript Type= protein_coding
chr17	7445061	7457707	7445061	7457707	+	ENST00000306071.6@CHRNB1	ENST00000306071.6	protein_coding	7445061,7445270,7446069,7446833,7447043,7447503,7448579,7454297,7455284,7455794,7456583	7445185,7445409,7446113,7446942,7447151,7447650,7448788,7454520,7455456,7455941,7457707	Gene ID= ENSG00000170175.10 TPM= 39.61 Transcript Type= protein_coding
chr17	7459366	7479625	7459366	7479625	-	ENST00000380599.8@ZBTB4	ENST00000380599.8	protein_coding	7479456,7467257,7465711,7459366	7479625,7467327,7466810,7463890	Gene ID= ENSG00000174282.11 TPM= 48.27 Transcript Type= protein_coding
chr17	7484366	7514616	7484366	7514616	+	ENST00000617998.4@POLR2A	ENST00000617998.4	protein_coding	7484366,7495941,7496210,7496440,7496764,7497356,7497650,7498078,7499039,7499281,7500639,7500940,7501289,7501526,7501900,7502518,7503121,7503385,7503586,7508251,7508944,7509532,7511215,7511406,7511811,7512158,7512477,7512774,7513021	7484857,7496073,7496346,7496613,7497045,7497517,7497870,7498210,7499163,7499491,7500848,7501108,7501383,7501729,7502122,7502701,7503292,7503490,7503791,7508475,7509190,7509632,7511319,7511588,7512014,7512344,7512590,7512923,7514616	Gene ID= ENSG00000181222.15 TPM= 34.75 Transcript Type= processed_transcript
chr17	7548891	7557890	7548891	7557890	+	ENST00000293825.10@TNFSF12	ENST00000293825.10	protein_coding	7548891,7549474,7550120,7550799,7550943,7556778,7557099	7549312,7549521,7550195,7550852,7550978,7556902,7557890	Gene ID= ENSG00000239697.10 TPM= 16.89 Transcript Type= protein_coding
chr17	7549058	7557890	7549058	7557890	+	ENST00000322272.11@TNFSF12	ENST00000322272.11	protein_coding	7549058,7549474,7550120,7550799,7550943,7553587,7556778,7557099	7549312,7549521,7550195,7550852,7550978,7553825,7556902,7557890	Gene ID= ENSG00000239697.10 TPM= 6.27 Transcript Type= nonsense_mediated_decay
chr17	7561875	7571969	7561875	7571969	+	ENST00000321337.11@SENP3	ENST00000321337.11	protein_coding	7561875,7563066,7564625,7564959,7565440,7565717,7566927,7570356,7570681,7570883,7571373	7562263,7563791,7564864,7565070,7565587,7565764,7567004,7570493,7570764,7570933,7571969	Gene ID= ENSG00000161956.12 TPM= 29.92 Transcript Type= protein_coding
chr17	7562226	7571969	7562226	7571969	+	ENST00000429205.6@SENP3	ENST00000429205.6	protein_coding	7562226,7563066,7564625,7564959,7565440,7565717,7566927,7570356,7570681,7570883,7571373,7571909	7562263,7563791,7564864,7565070,7565587,7565764,7567004,7570493,7570764,7570933,7571870,7571969	Gene ID= ENSG00000161956.12 TPM= 16.41 Transcript Type= protein_coding
chr17	7563287	7578715	7563287	7578715	+	ENST00000614237.1@SENP3-EIF4A1	ENST00000614237.1	protein_coding	7563287,7564625,7564959,7565440,7565717,7566927,7570356,7570681,7570883,7571373,7572284,7574260,7574546,7575119,7576524,7577056,7577344,7577569,7577827,7578165,7578342	7563791,7564864,7565070,7565587,7565764,7567004,7570493,7570764,7570933,7571479,7572864,7574308,7574678,7575258,7576692,7577165,7577487,7577706,7577916,7578244,7578715	Gene ID= ENSG00000277957.1 TPM= 251.7 Transcript Type= nonsense_mediated_decay
chr17	7572826	7579005	7572826	7579005	+	ENST00000293831.12@EIF4A1	ENST00000293831.12	protein_coding	7572826,7574260,7574546,7575119,7576524,7577056,7577344,7577569,7577827,7578165,7578342	7572864,7574308,7574678,7575258,7576692,7577165,7577487,7577706,7577916,7578244,7579005	Gene ID= ENSG00000161960.14 TPM= 209.71 Transcript Type= protein_coding
chr17	7572837	7578641	7572837	7578641	+	ENST00000577269.5@EIF4A1	ENST00000577269.5	protein_coding	7572837,7574260,7574546,7575119,7576524,7577056,7577344,7577569,7577827,7578227,7578342	7572864,7574308,7574678,7575258,7576692,7577165,7577487,7577706,7577916,7578244,7578641	Gene ID= ENSG00000161960.14 TPM= 6.76 Transcript Type= protein_coding
chr17	7579467	7582113	7579467	7582113	+	ENST00000250092.10@CD68	ENST00000250092.10	protein_coding	7579467,7579810,7580466,7580711,7580896,7581378	7579726,7580327,7580585,7580783,7581066,7582113	Gene ID= ENSG00000129226.13 TPM= 38.61 Transcript Type= protein_coding
chr17	7579491	7582111	7579491	7582111	+	ENST00000380498.10@CD68	ENST00000380498.10	protein_coding	7579491,7579891,7580466,7580711,7580896,7581378	7579726,7580327,7580585,7580783,7581066,7582111	Gene ID= ENSG00000129226.13 TPM= 6.76 Transcript Type= protein_coding
chr17	7581970	7584078	7581970	7584078	-	transcript1149.chr17.nnic@NA	transcript1149.chr17.nnic	NA	7581970	7584078	Gene ID= novel_gene_chr17_1150 TPM= 4.83 Transcript Type= NA
chr17	7583647	7588192	7583647	7588192	+	ENST00000250124.10@MPDU1	ENST00000250124.10	protein_coding	7583647,7585732,7585946,7586692,7586899,7587161,7587426	7583965,7585797,7586078,7586777,7587017,7587271,7588192	Gene ID= ENSG00000129255.15 TPM= 16.89 Transcript Type= protein_coding
chr17	7583852	7588176	7583852	7588176	+	ENST00000572836.5@MPDU1	ENST00000572836.5	protein_coding	7583852,7585732,7585946,7586692,7586899,7587426	7583965,7585797,7586078,7586777,7587271,7588176	Gene ID= ENSG00000129255.15 TPM= 2.41 Transcript Type= retained_intron
chr17	7591230	7614867	7591230	7614867	-	ENST00000250113.11@FXR2	ENST00000250113.11	protein_coding	7614452,7606097,7605645,7604009,7603757,7602909,7601409,7595824,7594679,7594238,7593918,7593403,7592984,7592694,7592504,7592254,7591230	7614867,7606149,7605738,7604080,7603905,7603002,7601525,7595994,7594757,7594347,7594004,7593625,7593181,7592894,7592599,7592354,7591925	Gene ID= ENSG00000129245.11 TPM= 397.71 Transcript Type= protein_coding
chr17	7626238	7627866	7626238	7627866	-	transcript1156.chr17.nic@SAT2	transcript1156.chr17.nic	protein_coding	7627143,7626943,7626753,7626238	7627866,7627044,7626793,7626614	Gene ID= ENSG00000141504.11 TPM= 4.66 Transcript Type= NA
chr17	7626238	7627866	7626238	7627866	-	transcript1159.chr17.nic@SAT2	transcript1159.chr17.nic	protein_coding	7627143,7626753,7626238	7627866,7627044,7626614	Gene ID= ENSG00000141504.11 TPM= 2.25 Transcript Type= NA
chr17	7626234	7627796	7626234	7627796	-	ENST00000576846.1@SAT2	ENST00000576846.1	protein_coding	7626234	7627796	Gene ID= ENSG00000141504.11 TPM= 3.86 Transcript Type= retained_intron
chr17	7626234	7627855	7626234	7627855	-	ENST00000269298.9@SAT2	ENST00000269298.9	protein_coding	7627570,7627363,7627143,7626943,7626753,7626234	7627855,7627414,7627226,7627044,7626793,7626614	Gene ID= ENSG00000141504.11 TPM= 17.21 Transcript Type= protein_coding
chr17	7688321	7703502	7688321	7703502	+	ENST00000396463.6@WRAP53	ENST00000396463.6	protein_coding	7688321,7688648,7689224,7689590,7700741,7701459,7701657,7702344,7702743,7702993,7703243	7688561,7689079,7689322,7689701,7700829,7701549,7701789,7702552,7702846,7703127,7703502	Gene ID= ENSG00000141499.16 TPM= 7.24 Transcript Type= protein_coding
chr17	7686301	7703502	7686301	7703502	+	ENST00000316024.9@WRAP53	ENST00000316024.9	protein_coding	7686301,7689224,7689590,7700741,7701459,7701657,7702344,7702743,7702993,7703243	7689079,7689322,7689701,7700829,7701549,7701789,7702552,7702846,7703127,7703502	Gene ID= ENSG00000141499.16 TPM= 4.34 Transcript Type= protein_coding
chr17	7855066	7856061	7855066	7856061	+	ENST00000574668.1@TMEM88	ENST00000574668.1	protein_coding	7855066,7855771	7855284,7856061	Gene ID= ENSG00000167874.6 TPM= 5.79 Transcript Type= protein_coding
chr17	7855065	7856099	7855065	7856099	+	ENST00000301599.6@TMEM88	ENST00000301599.6	protein_coding	7855065,7855445	7855284,7856099	Gene ID= ENSG00000167874.6 TPM= 8.69 Transcript Type= protein_coding
chr17	7856685	7857891	7856685	7857891	-	ENST00000575771.5@NAA38	ENST00000575771.5	protein_coding	7857383,7857015,7856685	7857891,7857198,7856843	Gene ID= ENSG00000183011.13 TPM= 27.03 Transcript Type= protein_coding
chr17	7856685	7857854	7856685	7857854	-	ENST00000333775.9@NAA38	ENST00000333775.9	protein_coding	7857015,7856685	7857854,7856843	Gene ID= ENSG00000183011.13 TPM= 47.3 Transcript Type= protein_coding
chr17	7856685	7857562	7856685	7857562	-	ENST00000575071.5@NAA38	ENST00000575071.5	protein_coding	7857383,7856985,7856685	7857562,7857198,7856843	Gene ID= ENSG00000183011.13 TPM= 6.27 Transcript Type= protein_coding
chr17	7856699	7857263	7856699	7857263	-	ENST00000576384.1@NAA38	ENST00000576384.1	protein_coding	7856985,7856699	7857263,7856843	Gene ID= ENSG00000183011.13 TPM= 8.21 Transcript Type= protein_coding
chr17	7857259	7862272	7857259	7862272	+	transcript1172.chr17.nic@CYB5D1	transcript1172.chr17.nic	protein_coding	7857259,7858403,7858606	7858294,7858479,7862272	Gene ID= ENSG00000182224.11 TPM= 1.93 Transcript Type= NA
chr17	7857983	7862282	7857983	7862282	+	ENST00000332439.4@CYB5D1	ENST00000332439.4	protein_coding	7857983,7858403,7858606,7859382	7858294,7858479,7858824,7862282	Gene ID= ENSG00000182224.11 TPM= 4.83 Transcript Type= protein_coding
chr17	7888791	7912760	7888791	7912760	+	ENST00000358181.8@CHD3	ENST00000358181.8	protein_coding	7888791,7889664,7890571,7890940,7893286,7893805,7894115,7894415,7894917,7895339,7897083,7897971,7898496,7899011,7899343,7899896,7900290,7900558,7900852,7901244,7902610,7902937,7903272,7903825,7904442,7905100,7905621,7905856,7906553,7906869,7907126,7907353,7907894,7908402,7908697,7909143,7910428,7910847,7911464	7889100,7889776,7890741,7891064,7893569,7893935,7894265,7894608,7895150,7895542,7897294,7898102,7898595,7899202,7899543,7900033,7900411,7900731,7900993,7901375,7902727,7903061,7903503,7903991,7904619,7905165,7905706,7905989,7906697,7907031,7907247,7907488,7908019,7908510,7908829,7909338,7910591,7910973,7912760	Gene ID= ENSG00000170004.16 TPM= 2.9 Transcript Type= protein_coding
chr17	7930345	7931999	7930345	7931999	-	ENST00000540486.5@TRAPPC1	ENST00000540486.5	protein_coding	7931940,7931731,7931506,7931011,7930345	7931999,7931829,7931576,7931149,7930734	Gene ID= ENSG00000170043.11 TPM= 6.76 Transcript Type= protein_coding
chr17	7930349	7931945	7930349	7931945	-	ENST00000303731.8@TRAPPC1	ENST00000303731.8	protein_coding	7931731,7931506,7931011,7930349	7931945,7931576,7931149,7930734	Gene ID= ENSG00000170043.11 TPM= 22.2 Transcript Type= protein_coding
chr17	7932155	7949578	7932155	7949578	+	ENST00000563694.5@CNTROB	ENST00000563694.5	protein_coding	7932155,7934138,7934465,7934989,7936366,7936701,7937164,7939513,7940096,7943391,7944123,7944476,7945728,7947571,7947916,7948157,7948487,7949085,7949385	7933349,7934222,7934546,7935145,7936482,7936817,7937262,7939749,7940242,7943524,7944248,7944638,7945986,7947722,7947979,7948327,7948619,7949157,7949578	Gene ID= ENSG00000170037.13 TPM= 4.83 Transcript Type= protein_coding
chr17	8144055	8156342	8144055	8156342	-	transcript1191.chr17.nic@PER1	transcript1191.chr17.nic	protein_coding	8156307,8150432,8150219,8149971,8149755,8149462,8149259,8148644,8148181,8147997,8147674,8147470,8147250,8146897,8146594,8146372,8145958,8144055	8156342,8150845,8150317,8150125,8149876,8149663,8149310,8148786,8148259,8148103,8147827,8147578,8147381,8147002,8146765,8146502,8146137,8144993	Gene ID= ENSG00000179094.15 TPM= 20.59 Transcript Type= NA
chr17	8140472	8152435	8140472	8152435	-	ENST00000317276.8@PER1	ENST00000317276.8	protein_coding	8152337,8150432,8150219,8149971,8149755,8149462,8149259,8148644,8148181,8147997,8147674,8147470,8147250,8146897,8146594,8146372,8145958,8144751,8143266,8142649,8142269,8141805,8140472	8152435,8150845,8150317,8150125,8149876,8149663,8149310,8148786,8148259,8148103,8147827,8147578,8147381,8147002,8146765,8146502,8146137,8144993,8143876,8142835,8142458,8141955,8141340	Gene ID= ENSG00000179094.15 TPM= 224.27 Transcript Type= protein_coding
chr17	8145326	8147309	8145326	8147309	-	transcript1205.chr17.nnic@NA	transcript1205.chr17.nnic	NA	8145326	8147309	Gene ID= novel_gene_chr17_1206 TPM= 4.83 Transcript Type= NA
chr17	8146772	8149188	8146772	8149188	+	transcript1201.chr17.nnic@NA	transcript1201.chr17.nnic	NA	8146772	8149188	Gene ID= novel_gene_chr17_1202 TPM= 2.9 Transcript Type= NA
chr17	8151993	8153998	8151993	8153998	+	transcript1199.chr17.nnic@NA	transcript1199.chr17.nnic	NA	8151993	8153998	Gene ID= novel_gene_chr17_1200 TPM= 22.2 Transcript Type= NA
chr17	8153439	8156340	8153439	8156340	-	transcript1203.chr17.nnic@NA	transcript1203.chr17.nnic	NA	8153439	8156340	Gene ID= novel_gene_chr17_1204 TPM= 4.83 Transcript Type= NA
chr17	8159149	8162975	8159149	8162975	-	ENST00000316509.10@VAMP2	ENST00000316509.10	protein_coding	8162878,8162249,8161608,8161473,8159149	8162975,8162369,8161766,8161524,8160871	Gene ID= ENSG00000220205.8 TPM= 18.34 Transcript Type= protein_coding
chr17	8220642	8224043	8220642	8224043	-	ENST00000315707.3@LINC00324	ENST00000315707.3	lincRNA	8223812,8222293,8220642	8224043,8223274,8221509	Gene ID= ENSG00000178977.3 TPM= 1.93 Transcript Type= lincRNA
chr17	8224821	8248044	8224821	8248044	-	ENST00000315684.12@CTC1	ENST00000315684.12	protein_coding	8248004,8242985,8238392,8238031,8237375,8236058,8235831,8235053,8234749,8234455,8232906,8232361,8231903,8231726,8231276,8230563,8230294,8229891,8229302,8229142,8228727,8228503,8224821	8248044,8243148,8238629,8238242,8237519,8236342,8235959,8235285,8234926,8234655,8233032,8232475,8232227,8231815,8231469,8230651,8230468,8229968,8229446,8229206,8228892,8228629,8228319	Gene ID= ENSG00000178971.13 TPM= 2.9 Transcript Type= protein_coding
chr17	8249286	8270485	8249286	8270485	+	ENST00000314666.10@PFAS	ENST00000314666.10	protein_coding	8249286,8253859,8254166,8255027,8255502,8255805,8256267,8256524,8256835,8257807,8258071,8262920,8263109,8263575,8263775,8264212,8264470,8264895,8265288,8265556,8265862,8266234,8266753,8267028,8267372,8267551,8268533,8268954	8249339,8254079,8254301,8255132,8255691,8255910,8256407,8256648,8256963,8257938,8258199,8262993,8263265,8263636,8263936,8264337,8264601,8265125,8265468,8265639,8266017,8266353,8266898,8267235,8267463,8267665,8268856,8270485	Gene ID= ENSG00000178921.13 TPM= 10.62 Transcript Type= protein_coding
chr17	8288497	8290092	8288497	8290092	+	ENST00000226105.10@RANGRF	ENST00000226105.10	protein_coding	8288497,8288956,8289258,8289503,8289813	8288865,8289072,8289414,8289588,8290092	Gene ID= ENSG00000108961.13 TPM= 6.11 Transcript Type= protein_coding
chr17	8288654	8290090	8288654	8290090	+	ENST00000407006.8@RANGRF	ENST00000407006.8	protein_coding	8288654,8288956,8289258,8289503	8288865,8289072,8289414,8290090	Gene ID= ENSG00000108961.13 TPM= 7.56 Transcript Type= protein_coding
chr17	8288678	8290092	8288678	8290092	+	ENST00000439238.3@RANGRF	ENST00000439238.3	protein_coding	8288678,8288956,8289258	8288865,8289072,8290092	Gene ID= ENSG00000108961.13 TPM= 1.77 Transcript Type= protein_coding
chr17	8310822	8322514	8310822	8322514	+	ENST00000421050.2@ARHGEF15	ENST00000421050.2	protein_coding	8310822,8311991,8312922,8313501,8314906,8315066,8315414,8315755,8316019,8318387,8318570,8318750,8319007,8319312,8319499,8320842	8310863,8312640,8313254,8313555,8314964,8315277,8315574,8315907,8316148,8318461,8318662,8318910,8319159,8319394,8319603,8322514	Gene ID= ENSG00000198844.10 TPM= 9.65 Transcript Type= protein_coding
chr17	8368637	8376711	8368637	8376711	-	ENST00000396267.1@KRBA2	ENST00000396267.1	protein_coding	8375900,8368637	8376711,8370386	Gene ID= ENSG00000184619.3 TPM= 1.93 Transcript Type= protein_coding
chr17	8368638	8376738	8368638	8376738	-	transcript1228.chr17.nnic@AC135178.2	transcript1228.chr17.nnic	protein_coding	8375900,8371874,8371600,8371309,8368638	8376738,8372081,8371784,8371494,8370386	Gene ID= ENSG00000263809.1 TPM= 1.93 Transcript Type= NA
chr17	8377521	8383167	8377521	8383167	-	ENST00000584164.5@RPL26	ENST00000584164.5	protein_coding	8382781,8382143,8379796,8377521	8383167,8382315,8379936,8377692	Gene ID= ENSG00000161970.12 TPM= 13.03 Transcript Type= protein_coding
chr17	8377520	8383193	8377520	8383193	-	ENST00000293842.9@RPL26	ENST00000293842.9	protein_coding	8383157,8382143,8379796,8377520	8383193,8382315,8379936,8377692	Gene ID= ENSG00000161970.12 TPM= 470.59 Transcript Type= protein_coding
chr17	8435925	8468153	8435925	8468153	+	transcript1238.chr17.nic@NDEL1	transcript1238.chr17.nic	protein_coding	8435925,8444260,8444954,8445711,8446754,8448550,8450780,8454796,8460009,8463320,8466930	8436045,8444357,8445040,8445864,8446902,8448686,8450953,8454887,8460160,8463354,8468153	Gene ID= ENSG00000166579.15 TPM= 10.14 Transcript Type= NA
chr17	8435861	8468160	8435861	8468160	+	ENST00000334527.11@NDEL1	ENST00000334527.11	protein_coding	8435861,8444260,8445711,8446754,8448550,8450780,8454796,8460009,8466930	8436045,8444357,8445864,8446902,8448686,8450953,8454887,8460160,8468160	Gene ID= ENSG00000166579.15 TPM= 7.24 Transcript Type= protein_coding
chr17	8878917	8887665	8878917	8887665	-	transcript1247.chr17.nic@PIK3R5	transcript1247.chr17.nic	protein_coding	8887521,8887096,8886477,8886229,8884707,8881788,8881630,8880905,8878917	8887665,8887221,8886605,8886322,8884783,8881881,8881712,8881017,8880786	Gene ID= ENSG00000141506.13 TPM= 1.93 Transcript Type= NA
chr17	9250471	9576236	9250471	9576236	-	ENST00000306357.8@STX8	ENST00000306357.8	protein_coding	9575792,9568371,9557434,9545172,9505038,9491829,9378552,9250471	9576236,9568470,9557528,9545282,9505162,9491921,9378653,9250645	Gene ID= ENSG00000170310.14 TPM= 37.65 Transcript Type= protein_coding
chr17	9250472	9575835	9250472	9575835	-	ENST00000575858.5@STX8	ENST00000575858.5	protein_coding	9575792,9568371,9505038,9491829,9378552,9250472	9575835,9568470,9505162,9491921,9378653,9250645	Gene ID= ENSG00000170310.14 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr17	9489692	9575833	9489692	9575833	-	transcript1251.chr17.nic@STX8	transcript1251.chr17.nic	protein_coding	9575792,9568371,9557434,9545172,9505038,9489692	9575833,9568470,9557528,9545282,9505162,9491921	Gene ID= ENSG00000170310.14 TPM= 1.93 Transcript Type= NA
chr17	9771434	9791612	9771434	9791612	-	transcript1255.chr17.nnic@DHRS7C	transcript1255.chr17.nnic	protein_coding	9791464,9791131,9781482,9779825,9777193,9772767,9771434	9791612,9791290,9781594,9780035,9777285,9772922,9771696	Gene ID= ENSG00000184544.11 TPM= 41.51 Transcript Type= NA
chr17	10390322	10421950	10390322	10421950	-	ENST00000403437.2@MYH8	ENST00000403437.2	protein_coding	10421930,10421663,10420018,10418887,10418645,10415681,10415472,10415292,10415116,10414386,10414192,10413902,10412610,10412370,10410777,10409279,10409097,10406892,10406690,10406274,10406041,10404330,10401543,10401275,10401046,10400869,10400390,10399543,10398768,10398444,10396803,10396553,10396330,10395133,10394249,10393085,10392831,10392542,10391882,10390322	10421950,10421706,10420257,10419030,10418801,10415708,10415580,10415384,10415179,10414484,10414295,10414040,10412728,10412519,10410947,10409588,10409164,10406979,10406807,10406397,10406177,10404585,10401785,10401451,10401191,10400959,10400779,10399669,10398886,10398640,10396986,10396718,10396454,10395441,10394452,10393210,10393001,10392646,10391977,10390603	Gene ID= ENSG00000133020.4 TPM= 5.79 Transcript Type= protein_coding
chr17	10492307	10518543	10492307	10518543	-	ENST00000226207.5@MYH1	ENST00000226207.5	protein_coding	10518520,10518240,10516439,10516199,10515926,10514868,10514010,10513821,10513626,10512867,10512681,10512408,10512074,10511839,10509485,10508363,10507886,10506012,10505812,10505388,10505163,10504810,10503006,10502738,10501766,10501594,10501110,10500626,10498974,10498626,10497734,10497287,10497069,10496241,10495950,10495192,10494931,10494569,10494354,10492307	10518543,10518270,10516682,10516342,10516082,10514895,10514124,10513913,10513689,10512965,10512784,10512546,10512192,10511988,10509655,10508672,10507956,10506099,10505929,10505511,10505299,10505065,10503248,10502914,10501911,10501684,10501499,10500752,10499092,10498822,10497917,10497452,10497193,10496549,10496153,10495317,10495101,10494673,10494449,10492568	Gene ID= ENSG00000109061.9 TPM= 4364.29 Transcript Type= protein_coding
chr17	10521152	10549957	10521152	10549957	-	ENST00000245503.9@MYH2	ENST00000245503.9	protein_coding	10549636,10549375,10547717,10547475,10545346,10544100,10543902,10543711,10543098,10542875,10540594,10539928,10539444,10539205,10537665,10537233,10536530,10535278,10535073,10533509,10533285,10531633,10529832,10529564,10529336,10529162,10528690,10527748,10526938,10526599,10525693,10525451,10525224,10524757,10524466,10523759,10523496,10523308,10523090,10521152	10549957,10549417,10547940,10547618,10545502,10544127,10544016,10543803,10543161,10542973,10540697,10540066,10539562,10539354,10537835,10537542,10536606,10535365,10535190,10533632,10533421,10531888,10530074,10529740,10529481,10529252,10529079,10527874,10527056,10526795,10525876,10525616,10525348,10525065,10524669,10523884,10523666,10523412,10523185,10521432	Gene ID= ENSG00000125414.18 TPM= 1439.26 Transcript Type= protein_coding
chr17	10525288	10549629	10525288	10549629	-	transcript1470.chr17.nic@MYH2	transcript1470.chr17.nic	protein_coding	10549559,10549375,10547717,10547475,10545346,10544100,10543902,10543711,10543098,10542875,10540594,10539928,10539444,10539205,10537665,10537233,10536530,10535278,10535073,10533509,10533285,10531633,10529832,10529564,10529336,10529162,10528690,10527748,10526938,10526599,10525693,10525451,10525288	10549629,10549417,10547940,10547618,10545502,10544127,10544016,10543803,10543161,10542973,10540697,10540066,10539562,10539354,10537835,10537542,10536606,10535365,10535190,10533632,10533421,10531888,10530074,10529740,10529481,10529252,10529079,10527874,10527056,10526795,10525876,10525616,10525348	Gene ID= ENSG00000125414.18 TPM= 79.71 Transcript Type= NA
chr17	10521152	10631738	10521152	10631738	-	transcript1509.chr17.nnic@MYH2	transcript1509.chr17.nnic	protein_coding	10631696,10524466,10523759,10523496,10523308,10523090,10521152	10631738,10524475,10523884,10523666,10523412,10523185,10521432	Gene ID= ENSG00000125414.18 TPM= 219.2 Transcript Type= NA
chr17	10521156	10549623	10521156	10549623	-	ENST00000397183.6@MYH2	ENST00000397183.6	protein_coding	10549559,10549375,10547717,10547475,10545346,10544100,10543902,10543711,10543098,10542875,10540594,10539928,10539444,10539205,10537665,10537233,10536530,10535278,10535073,10533509,10533285,10531633,10529832,10529564,10529336,10529162,10528690,10527748,10526938,10526599,10525693,10525451,10525224,10524757,10524466,10523759,10523496,10523308,10523090,10521156	10549623,10549417,10547940,10547618,10545502,10544127,10544016,10543803,10543161,10542973,10540697,10540066,10539562,10539354,10537835,10537542,10536606,10535365,10535190,10533632,10533421,10531888,10530074,10529740,10529481,10529252,10529079,10527874,10527056,10526795,10525876,10525616,10525348,10525065,10524669,10523884,10523666,10523412,10523185,10521432	Gene ID= ENSG00000125414.18 TPM= 297.46 Transcript Type= protein_coding
chr17	10614317	10624406	10614317	10624406	+	transcript1524.chr17.nnic@MYHAS	transcript1524.chr17.nnic	antisense_RNA	10614317,10622752	10614427,10624406	Gene ID= ENSG00000272975.1 TPM= 2.9 Transcript Type= NA
chr17	10611855	10643007	10611855	10643007	+	transcript1516.chr17.nnic@AC005323.1	transcript1516.chr17.nnic	antisense_RNA	10611855,10612459,10613745,10641136,10642249	10611945,10612574,10613877,10641330,10643007	Gene ID= ENSG00000214970.8 TPM= 1.93 Transcript Type= NA
chr17	10619102	10624406	10619102	10624406	+	transcript1522.chr17.nnic@AC005323.1	transcript1522.chr17.nnic	antisense_RNA	10619102,10621452,10622752	10619930,10621749,10624406	Gene ID= ENSG00000214970.8 TPM= 2.9 Transcript Type= NA
chr17	10628527	10657309	10628527	10657309	-	ENST00000583535.5@MYH3	ENST00000583535.5	protein_coding	10657289,10656090,10654861,10652420,10651512,10650374,10649577,10648557,10647363,10647182,10645929,10645707,10644584,10644351,10642826,10642417,10642240,10641285,10641085,10640563,10640333,10639996,10639560,10639298,10639044,10638873,10638043,10637809,10635735,10635367,10634840,10634017,10633591,10632476,10631813,10631611,10630288,10630092,10629842,10629597,10628527	10657309,10656148,10655072,10652563,10651668,10650401,10649685,10648649,10647426,10647280,10646032,10645845,10644702,10644500,10642996,10642723,10642310,10641372,10641202,10640686,10640469,10640251,10639802,10639474,10639189,10638963,10638432,10637935,10635853,10635563,10635023,10634182,10633715,10632784,10632016,10631736,10630458,10630196,10629937,10629734,10628679	Gene ID= ENSG00000109063.14 TPM= 3.86 Transcript Type= protein_coding
chr17	10697614	10711233	10697614	10711233	+	ENST00000468843.1@ADPRM	ENST00000468843.1	protein_coding	10697614,10704910,10706438,10710834	10697667,10705615,10706554,10711233	Gene ID= ENSG00000170222.11 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr17	10697594	10711233	10697594	10711233	+	ENST00000379774.4@ADPRM	ENST00000379774.4	protein_coding	10697594,10704910,10706438,10710834	10697667,10705527,10706554,10711233	Gene ID= ENSG00000170222.11 TPM= 5.79 Transcript Type= protein_coding
chr17	10713295	10730316	10713295	10730316	-	ENST00000341871.7@TMEM220	ENST00000341871.7	protein_coding	10729780,10729031,10726204,10725011,10723270,10713295	10730316,10729060,10726264,10725134,10723329,10715588	Gene ID= ENSG00000187824.8 TPM= 1.93 Transcript Type= protein_coding
chr17	10714676	10730023	10714676	10730023	-	ENST00000455996.6@TMEM220	ENST00000455996.6	protein_coding	10729780,10726204,10725011,10723270,10714676	10730023,10726264,10725134,10723329,10715588	Gene ID= ENSG00000187824.8 TPM= 1.93 Transcript Type= protein_coding
chr17	10729125	10730003	10729125	10730003	-	transcript1542.chr17.nnic@NA	transcript1542.chr17.nnic	NA	10729125	10730003	Gene ID= novel_gene_chr17_1543 TPM= 1.93 Transcript Type= NA
chr17	11977439	11997437	11977439	11997437	-	transcript1546.chr17.nnic@ZNF18	transcript1546.chr17.nnic	protein_coding	11996810,11992443,11990974,11990462,11984113,11983297,11977439	11997437,11992911,11991163,11990550,11984197,11983404,11978744	Gene ID= ENSG00000154957.13 TPM= 2.9 Transcript Type= NA
chr17	11977439	11997510	11977439	11997510	-	ENST00000580306.6@ZNF18	ENST00000580306.6	protein_coding	11997431,11992443,11990974,11990462,11984113,11983297,11977439	11997510,11992911,11991163,11990550,11984197,11983407,11978744	Gene ID= ENSG00000154957.13 TPM= 5.79 Transcript Type= protein_coding
chr17	11977452	11997457	11977452	11997457	-	ENST00000454073.7@ZNF18	ENST00000454073.7	protein_coding	11997431,11992443,11990974,11990462,11984113,11983297,11977452	11997457,11992911,11991163,11990550,11984197,11983404,11978744	Gene ID= ENSG00000154957.13 TPM= 1.93 Transcript Type= protein_coding
chr17	12020824	12143823	12020824	12143823	+	ENST00000353533.9@MAP2K4	ENST00000353533.9	protein_coding	12020824,12054889,12081356,12095575,12107790,12110375,12113233,12125294,12129139,12139839,12141147	12021001,12054991,12081530,12095694,12107909,12110426,12113360,12125371,12129287,12139884,12143823	Gene ID= ENSG00000065559.14 TPM= 17.38 Transcript Type= protein_coding
chr17	12992391	13017692	12992391	13017692	-	transcript1570.chr17.nic@ELAC2	transcript1570.chr17.nic	protein_coding	13017582,13017071,13016862,13015768,13014439,13013207,13011663,13010613,13005921,13005753,13004989,13003479,13002441,13002274,13000156,12998412,12996547,12995940,12995703,12994963,12994764,12994425,12993687,12992391	13017692,13017121,13016932,13015832,13014496,13013275,13011782,13010671,13005979,13005825,13005101,13003574,13002579,13002359,13000274,12998508,12996685,12995978,12995812,12995062,12994884,12994503,12993831,12993045	Gene ID= ENSG00000006744.18 TPM= 15.28 Transcript Type= NA
chr17	12992391	13018187	12992391	13018187	-	ENST00000338034.8@ELAC2	ENST00000338034.8	protein_coding	13017703,13017071,13016862,13015768,13014439,13013207,13011663,13010613,13005921,13005753,13004989,13003479,13002441,13002274,13000156,12998412,12996547,12995940,12995703,12994963,12994764,12994425,12993687,12992391	13018187,13017121,13016932,13015832,13014496,13013275,13011782,13010671,13005979,13005825,13005101,13003574,13002579,13002359,13000274,12998508,12996685,12995978,12995812,12995062,12994884,12994503,12993831,12993045	Gene ID= ENSG00000006744.18 TPM= 97.81 Transcript Type= protein_coding
chr17	14069497	14217922	14069497	14217922	+	transcript1584.chr17.nnic@COX10	transcript1584.chr17.nnic	protein_coding	14069497,14074323,14076735,14102118,14159877,14191989,14206810,14208554,14209509,14211288,14215810,14216685	14069648,14074456,14077056,14102242,14159947,14192221,14207268,14208790,14209965,14211508,14215937,14217922	Gene ID= ENSG00000006695.10 TPM= 1.93 Transcript Type= NA
chr17	14069496	14077322	14069496	14077322	+	ENST00000429152.6@COX10	ENST00000429152.6	protein_coding	14069496,14074323,14076735	14069648,14074456,14077322	Gene ID= ENSG00000006695.10 TPM= 6.76 Transcript Type= protein_coding
chr17	14069529	14208677	14069529	14208677	+	ENST00000261643.7@COX10	ENST00000261643.7	protein_coding	14069529,14074323,14076735,14102118,14159877,14191989,14206810	14069648,14074456,14077056,14102242,14159947,14192221,14208677	Gene ID= ENSG00000006695.10 TPM= 77.22 Transcript Type= protein_coding
chr17	15229779	15262552	15229779	15262552	-	transcript1592.chr17.nnic@PMP22	transcript1592.chr17.nnic	protein_coding	15262429,15260650,15259094,15239471,15232369,15229779	15262552,15260761,15259193,15239611,15232613,15231080	Gene ID= ENSG00000109099.13 TPM= 18.82 Transcript Type= NA
chr17	15229778	15262552	15229778	15262552	-	transcript1603.chr17.nnic@PMP22	transcript1603.chr17.nnic	protein_coding	15262429,15260650,15259094,15239471,15229778	15262552,15260983,15259193,15239611,15231080	Gene ID= ENSG00000109099.13 TPM= 28.48 Transcript Type= NA
chr17	15229778	15262589	15229778	15262589	-	ENST00000395938.6@PMP22	ENST00000395938.6	protein_coding	15262429,15260650,15259094,15239471,15229778	15262589,15260761,15259193,15239611,15231080	Gene ID= ENSG00000109099.13 TPM= 514.03 Transcript Type= protein_coding
chr17	15627967	15651883	15627967	15651883	-	transcript1625.chr17.nic@AC005324.3	transcript1625.chr17.nic	protein_coding	15651091,15642721,15636036,15632509,15631619,15627967	15651883,15642816,15636269,15632674,15631714,15629198	Gene ID= ENSG00000251537.4 TPM= 22.44 Transcript Type= NA
chr17	15627967	15684312	15627967	15684312	-	transcript1621.chr17.nic@TRIM16	transcript1621.chr17.nic	protein_coding	15684196,15683036,15682854,15680865,15642721,15636036,15632509,15631619,15627967	15684312,15683157,15682951,15680953,15642816,15636269,15632674,15631714,15629198	Gene ID= ENSG00000221926.11 TPM= 3.14 Transcript Type= NA
chr17	15627967	15651691	15627967	15651691	-	transcript1627.chr17.nic@TRIM16	transcript1627.chr17.nic	protein_coding	15651091,15642721,15636036,15631619,15627967	15651691,15642816,15636269,15631714,15629198	Gene ID= ENSG00000221926.11 TPM= 4.1 Transcript Type= NA
chr17	15627960	15642964	15627960	15642964	-	ENST00000577886.5@TRIM16	ENST00000577886.5	protein_coding	15642721,15636036,15632509,15631619,15627960	15642964,15636269,15632674,15631714,15629198	Gene ID= ENSG00000221926.11 TPM= 40.78 Transcript Type= protein_coding
chr17	15976560	15999714	15976560	15999714	-	transcript1630.chr17.nic@ZSWIM7	transcript1630.chr17.nic	protein_coding	15999503,15993757,15987266,15981040,15978044,15977800,15977579,15976560	15999714,15993778,15987368,15981144,15978163,15977913,15977700,15977092	Gene ID= ENSG00000214941.7 TPM= 1.93 Transcript Type= NA
chr17	15977727	15999717	15977727	15999717	-	ENST00000491631.5@ZSWIM7	ENST00000491631.5	protein_coding	15999506,15993757,15987266,15981040,15977727	15999717,15993778,15987368,15981144,15978163	Gene ID= ENSG00000214941.7 TPM= 7.72 Transcript Type= nonsense_mediated_decay
chr17	15976560	15999650	15976560	15999650	-	ENST00000490395.5@ZSWIM7	ENST00000490395.5	protein_coding	15999506,15993757,15987266,15981040,15978044,15977800,15977579,15976560	15999650,15993778,15987368,15981144,15978163,15977913,15977700,15977092	Gene ID= ENSG00000214941.7 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr17	15977727	15999684	15977727	15999684	-	ENST00000472495.5@ZSWIM7	ENST00000472495.5	protein_coding	15999519,15993757,15987266,15981040,15978044,15977727	15999684,15993778,15987368,15981144,15978163,15977913	Gene ID= ENSG00000214941.7 TPM= 22.44 Transcript Type= protein_coding
chr17	15977727	15999688	15977727	15999688	-	ENST00000460315.5@ZSWIM7	ENST00000460315.5	protein_coding	15999503,15993757,15987266,15981040,15978044,15977727	15999688,15993778,15987368,15981144,15978163,15977913	Gene ID= ENSG00000214941.7 TPM= 3.14 Transcript Type= nonsense_mediated_decay
chr17	15977733	15999669	15977733	15999669	-	ENST00000486706.6@ZSWIM7	ENST00000486706.6	protein_coding	15999506,15993757,15987266,15986800,15981040,15977733	15999669,15993778,15987368,15986892,15981144,15978163	Gene ID= ENSG00000214941.7 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr17	15977727	15999639	15977727	15999639	-	ENST00000474716.5@ZSWIM7	ENST00000474716.5	protein_coding	15999506,15993757,15987266,15981040,15978044,15977727	15999639,15993778,15987368,15981144,15978163,15977913	Gene ID= ENSG00000214941.7 TPM= 2.17 Transcript Type= nonsense_mediated_decay
chr17	15977730	15999683	15977730	15999683	-	ENST00000495825.6@ZSWIM7	ENST00000495825.6	protein_coding	15999660,15993757,15987266,15981040,15978044,15977730	15999683,15993778,15987368,15981144,15978163,15977913	Gene ID= ENSG00000214941.7 TPM= 1.21 Transcript Type= processed_transcript
chr17	15999380	16028912	15999380	16028912	+	ENST00000261647.9@TTC19	ENST00000261647.9	protein_coding	15999380,16000118,16001915,16002793,16003831,16004201,16006474,16025017,16026540,16027374	16000032,16000245,16002025,16002831,16003887,16004262,16006568,16025171,16026702,16028912	Gene ID= ENSG00000011295.15 TPM= 4.83 Transcript Type= protein_coding
chr17	15999802	16028786	15999802	16028786	+	ENST00000475723.5@TTC19	ENST00000475723.5	protein_coding	15999802,16000118,16001915,16002793,16003831,16004201,16006474,16025017,16026540,16027374	16000032,16000382,16002025,16002831,16003887,16004262,16006568,16025171,16026702,16028786	Gene ID= ENSG00000011295.15 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr17	16126107	16215551	16126107	16215551	-	transcript1648.chr17.nic@NCOR1	transcript1648.chr17.nic	protein_coding	16215362,16198601,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126107	16215551,16198719,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126209	Gene ID= ENSG00000141027.20 TPM= 10.62 Transcript Type= NA
chr17	16126132	16215577	16126132	16215577	-	transcript1658.chr17.nnic@NCOR1	transcript1658.chr17.nnic	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151435,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215577,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 2.9 Transcript Type= NA
chr17	16126132	16215577	16126132	16215577	-	transcript1659.chr17.nic@NCOR1	transcript1659.chr17.nic	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215577,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 10.62 Transcript Type= NA
chr17	16126082	16215537	16126082	16215537	-	ENST00000411510.5@NCOR1	ENST00000411510.5	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16149451,16146376,16143606,16139008,16138158,16137311,16126082	16215537,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16149517,16146548,16143696,16139186,16138212,16137412,16126209	Gene ID= ENSG00000141027.20 TPM= 10.62 Transcript Type= protein_coding
chr17	16126107	16215529	16126107	16215529	-	ENST00000582357.5@NCOR1	ENST00000582357.5	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126107	16215529,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126209	Gene ID= ENSG00000141027.20 TPM= 26.06 Transcript Type= protein_coding
chr17	16126132	16215530	16126132	16215530	-	ENST00000436828.5@NCOR1	ENST00000436828.5	protein_coding	16215362,16198601,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215530,16198719,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 21.24 Transcript Type= protein_coding
chr17	16126132	16215530	16126132	16215530	-	ENST00000460276.5@NCOR1	ENST00000460276.5	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215530,16194639,16186687,16172020,16165161,16158873,16153395,16151998,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr17	16311469	16312743	16311469	16312743	-	transcript1682.chr17.nnic@NA	transcript1682.chr17.nnic	NA	16311469	16312743	Gene ID= novel_gene_chr17_1683 TPM= 1.93 Transcript Type= NA
chr17	16342534	16353499	16342534	16353499	-	ENST00000299736.4@CENPV	ENST00000299736.4	protein_coding	16353027,16349931,16348616,16344597,16342534	16353499,16350029,16348685,16344711,16342941	Gene ID= ENSG00000166582.9 TPM= 59.85 Transcript Type= protein_coding
chr17	16342534	16353456	16342534	16353456	-	ENST00000476243.5@CENPV	ENST00000476243.5	protein_coding	16353027,16349931,16348616,16344597,16342534	16353456,16350029,16349333,16344711,16342941	Gene ID= ENSG00000166582.9 TPM= 11.58 Transcript Type= nonsense_mediated_decay
chr17	16380799	16382740	16380799	16382740	+	ENST00000302182.7@UBB	ENST00000302182.7	protein_coding	16380799,16381902	16381184,16382740	Gene ID= ENSG00000170315.13 TPM= 666.06 Transcript Type= protein_coding
chr17	16381290	16382740	16381290	16382740	+	ENST00000395839.5@UBB	ENST00000395839.5	protein_coding	16381290,16381902	16381462,16382740	Gene ID= ENSG00000170315.13 TPM= 42.47 Transcript Type= protein_coding
chr17	16415542	16437003	16415542	16437003	+	ENST00000338560.11@TRPV2	ENST00000338560.11	protein_coding	16415542,16417562,16420115,16422599,16423469,16426099,16426722,16427449,16428317,16428817,16431784,16431966,16433574,16434890,16436789	16415833,16417868,16420248,16422889,16423767,16426269,16426877,16427547,16428387,16428982,16431850,16432300,16433698,16434969,16437003	Gene ID= ENSG00000187688.14 TPM= 5.79 Transcript Type= protein_coding
chr17	16439036	16442012	16439036	16442012	+	transcript1696.chr17.nic@LRRC75A-AS1	transcript1696.chr17.nic	processed_transcript	16439036,16439327,16439528,16440185,16441074,16441368	16439060,16439414,16439703,16440253,16441130,16442012	Gene ID= ENSG00000175061.17 TPM= 3.81 Transcript Type= NA
chr17	16438987	16442028	16438987	16442028	+	ENST00000481898.5@LRRC75A-AS1	ENST00000481898.5	processed_transcript	16438987,16439327,16439660,16440185,16441074,16441368	16439060,16439414,16439703,16440253,16441130,16442028	Gene ID= ENSG00000175061.17 TPM= 4.78 Transcript Type= antisense_RNA
chr17	16438985	16442012	16438985	16442012	+	transcript1701.chr17.nnic@LRRC75A-AS1	transcript1701.chr17.nnic	processed_transcript	16438985,16440185,16441074,16441368	16439060,16440253,16441130,16442012	Gene ID= ENSG00000175061.17 TPM= 2.85 Transcript Type= NA
chr17	16439020	16442012	16439020	16442012	+	ENST00000582911.5@LRRC75A-AS1	ENST00000582911.5	processed_transcript	16439020,16439327,16440185,16441074,16441368	16439060,16439393,16440253,16441130,16442012	Gene ID= ENSG00000175061.17 TPM= 75.25 Transcript Type= antisense_RNA
chr17	16439011	16441995	16439011	16441995	+	ENST00000497774.5@LRRC75A-AS1	ENST00000497774.5	processed_transcript	16439011,16439327,16441074,16441368	16439060,16440253,16441130,16441995	Gene ID= ENSG00000175061.17 TPM= 1.93 Transcript Type= retained_intron
chr17	16439321	16441987	16439321	16441987	+	ENST00000481027.5@LRRC75A-AS1	ENST00000481027.5	processed_transcript	16439321,16439528,16440185,16441074,16441368	16439414,16439703,16440253,16441130,16441987	Gene ID= ENSG00000175061.17 TPM= 2.12 Transcript Type= antisense_RNA
chr17	16553110	16569213	16553110	16569213	-	transcript1707.chr17.nic@ZNF287	transcript1707.chr17.nic	protein_coding	16567329,16566525,16563699,16563146,16553110	16569213,16566622,16563825,16563232,16553426	Gene ID= ENSG00000141040.14 TPM= 5.79 Transcript Type= NA
chr17	17042437	17185560	17042437	17185560	+	transcript1715.chr17.nic@MPRIP	transcript1715.chr17.nic	protein_coding	17042437,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138429,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 15.25 Transcript Type= NA
chr17	17042437	17185560	17042437	17185560	+	transcript1718.chr17.nic@MPRIP	transcript1718.chr17.nic	protein_coding	17042437,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138075,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 24.26 Transcript Type= NA
chr17	17042437	17185560	17042437	17185560	+	transcript1719.chr17.nic@MPRIP	transcript1719.chr17.nic	protein_coding	17042437,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138075,17142765,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 17.42 Transcript Type= NA
chr17	17042849	17185560	17042849	17185560	+	ENST00000341712.8@MPRIP	ENST00000341712.8	protein_coding	17042849,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138075,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 197.77 Transcript Type= protein_coding
chr17	17165556	17185560	17165556	17185560	+	ENST00000414263.5@MPRIP	ENST00000414263.5	protein_coding	17165556,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17180607,17184823	17167915,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 6.56 Transcript Type= protein_coding
chr17	17200995	17206315	17200995	17206315	-	ENST00000321560.3@PLD6	ENST00000321560.3	protein_coding	17205860,17200995	17206315,17203098	Gene ID= ENSG00000179598.5 TPM= 18.34 Transcript Type= protein_coding
chr17	17212212	17237161	17212212	17237161	-	transcript1740.chr17.nnic@FLCN	transcript1740.chr17.nnic	protein_coding	17236912,17232788,17231794,17228623,17227889,17226176,17223922,17222501,17221537,17219019,17217069,17216380,17215185,17214985,17212212	17237161,17232901,17231882,17228821,17228161,17226322,17224143,17222661,17221628,17219209,17217182,17216503,17215316,17215090,17213856	Gene ID= ENSG00000154803.12 TPM= 5.79 Transcript Type= NA
chr17	17212212	17237139	17212212	17237139	-	ENST00000285071.8@FLCN	ENST00000285071.8	protein_coding	17236912,17232788,17231794,17227889,17226176,17223922,17222501,17221537,17219019,17217069,17216380,17215185,17214985,17212212	17237139,17232901,17231882,17228161,17226322,17224143,17222661,17221628,17219209,17217182,17216503,17215316,17215090,17213856	Gene ID= ENSG00000154803.12 TPM= 107.15 Transcript Type= protein_coding
chr17	17221171	17237139	17221171	17237139	-	ENST00000389169.9@FLCN	ENST00000389169.9	protein_coding	17236912,17232788,17231794,17227889,17226176,17223922,17222501,17221171	17237139,17232901,17231882,17228161,17226322,17224143,17222661,17221628	Gene ID= ENSG00000154803.12 TPM= 12.55 Transcript Type= protein_coding
chr17	17224553	17237188	17224553	17237188	-	ENST00000389171.4@FLCN	ENST00000389171.4	protein_coding	17236912,17232788,17231794,17227889,17224553	17237188,17232901,17231882,17228161,17226322	Gene ID= ENSG00000154803.12 TPM= 2.9 Transcript Type= retained_intron
chr17	17228902	17230741	17228902	17230741	+	transcript1763.chr17.nnic@NA	transcript1763.chr17.nnic	NA	17228902	17230741	Gene ID= novel_gene_chr17_1764 TPM= 15.44 Transcript Type= NA
chr17	17246836	17281293	17246836	17281293	-	ENST00000268717.9@COPS3	ENST00000268717.9	protein_coding	17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246836	17281293,17276164,17271008,17270807,17267977,17264981,17262106,17260474,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 210.92 Transcript Type= protein_coding
chr17	17246835	17281298	17246835	17281298	-	transcript1774.chr17.nic@COPS3	transcript1774.chr17.nic	protein_coding	17281132,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246835	17281298,17271008,17270807,17267977,17264981,17262106,17260474,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 18.58 Transcript Type= NA
chr17	17246835	17281302	17246835	17281302	-	transcript1777.chr17.nic@COPS3	transcript1777.chr17.nic	protein_coding	17281132,17276035,17270896,17270758,17267885,17264802,17261966,17254859,17248926,17247480,17246835	17281302,17276164,17271008,17270807,17267977,17264981,17262106,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 7 Transcript Type= NA
chr17	17280892	17282029	17280892	17282029	+	transcript1787.chr17.nnic@NA	transcript1787.chr17.nnic	NA	17280892	17282029	Gene ID= novel_gene_chr17_1788 TPM= 1.93 Transcript Type= NA
chr17	17303325	17347661	17303325	17347661	+	transcript1790.chr17.nnic@NT5M	transcript1790.chr17.nnic	protein_coding	17303325,17306543,17323185,17333496,17344794,17346805	17303817,17306643,17323245,17333588,17344908,17347661	Gene ID= ENSG00000205309.13 TPM= 5.6 Transcript Type= NA
chr17	17303327	17347661	17303327	17347661	+	transcript1799.chr17.nic@NT5M	transcript1799.chr17.nic	protein_coding	17303327,17306543,17323185,17344794,17346805	17303901,17306643,17323245,17344908,17347661	Gene ID= ENSG00000205309.13 TPM= 5.6 Transcript Type= NA
chr17	17303335	17347661	17303335	17347661	+	ENST00000389022.8@NT5M	ENST00000389022.8	protein_coding	17303335,17306543,17323185,17344794,17346805	17303817,17306643,17323245,17344908,17347661	Gene ID= ENSG00000205309.13 TPM= 29.73 Transcript Type= protein_coding
chr17	17303335	17347661	17303335	17347661	+	ENST00000616989.1@NT5M	ENST00000616989.1	protein_coding	17303335,17306543,17323185,17344794,17346805	17303817,17306643,17323245,17344926,17347661	Gene ID= ENSG00000205309.13 TPM= 6.56 Transcript Type= protein_coding
chr17	17383377	17384012	17383377	17384012	-	ENST00000392730.2@AC073621.1	ENST00000392730.2	processed_pseudogene	17383377	17384012	Gene ID= ENSG00000215030.5 TPM= 77.22 Transcript Type= processed_pseudogene
chr17	17476986	17493226	17476986	17493226	+	ENST00000268711.3@MED9	ENST00000268711.3	protein_coding	17476986,17491279	17477265,17493226	Gene ID= ENSG00000141026.5 TPM= 61.78 Transcript Type= protein_coding
chr17	17477007	17477576	17477007	17477576	+	transcript1823.chr17.nnic@NA	transcript1823.chr17.nnic	NA	17477007	17477576	Gene ID= novel_gene_chr17_1824 TPM= 1.93 Transcript Type= NA
chr17	17494437	17496393	17494437	17496393	-	ENST00000225688.3@RASD1	ENST00000225688.3	protein_coding	17495896,17494437	17496393,17495684	Gene ID= ENSG00000108551.4 TPM= 1725.98 Transcript Type= protein_coding
chr17	17505563	17591708	17505563	17591708	-	transcript1805.chr17.nic@PEMT	transcript1805.chr17.nic	protein_coding	17591597,17576920,17522280,17512509,17509434,17506227,17505563	17591708,17577027,17522395,17512654,17509545,17506301,17505848	Gene ID= ENSG00000133027.17 TPM= 4.83 Transcript Type= NA
chr17	17505563	17591700	17505563	17591700	-	ENST00000255389.9@PEMT	ENST00000255389.9	protein_coding	17591531,17576920,17522280,17512509,17509434,17506227,17505563	17591700,17577027,17522395,17512654,17509545,17506301,17505848	Gene ID= ENSG00000133027.17 TPM= 25.1 Transcript Type= protein_coding
chr17	17591724	17592386	17591724	17592386	+	transcript1827.chr17.nnic@NA	transcript1827.chr17.nnic	NA	17591724	17592386	Gene ID= novel_gene_chr17_1828 TPM= 1.93 Transcript Type= NA
chr17	17681399	17685050	17681399	17685050	+	transcript1830.chr17.nnic@RAI1	transcript1830.chr17.nnic	protein_coding	17681399,17683546,17684065	17681793,17683703,17685050	Gene ID= ENSG00000108557.18 TPM= 1.93 Transcript Type= NA
chr17	17681473	17811453	17681473	17811453	+	ENST00000353383.5@RAI1	ENST00000353383.5	protein_coding	17681473,17724028,17792933,17803756,17809390,17809970	17681793,17724159,17798513,17803849,17809439,17811453	Gene ID= ENSG00000108557.18 TPM= 17.38 Transcript Type= protein_coding
chr17	17776686	17779529	17776686	17779529	-	ENST00000543475.1@SMCR5	ENST00000543475.1	antisense_RNA	17776686	17779529	Gene ID= ENSG00000226746.2 TPM= 1.93 Transcript Type= antisense_RNA
chr17	17812073	17823609	17812073	17823609	-	transcript1831.chr17.nic@SREBF1	transcript1831.chr17.nic	protein_coding	17823518,17820090,17819538,17819320,17819013,17818260,17817696,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17812073	17823609,17820521,17819725,17819454,17819234,17818374,17817916,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851	Gene ID= ENSG00000072310.16 TPM= 14.48 Transcript Type= NA
chr17	17812073	17837002	17812073	17837002	-	ENST00000261646.9@SREBF1	ENST00000261646.9	protein_coding	17836727,17820090,17819538,17819320,17819013,17818260,17817696,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17812073	17837002,17820521,17819725,17819454,17819234,17818374,17817916,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851	Gene ID= ENSG00000072310.16 TPM= 17.38 Transcript Type= protein_coding
chr17	17846825	17972429	17846825	17972429	-	transcript1836.chr17.nic@TOM1L2	transcript1836.chr17.nic	protein_coding	17972262,17907447,17898596,17893661,17884634,17882705,17879627,17869340,17866876,17866296,17862731,17861476,17848823,17846825	17972429,17907531,17898674,17893810,17884768,17882863,17879743,17869473,17866924,17866419,17862848,17861551,17848859,17847783	Gene ID= ENSG00000175662.17 TPM= 8.69 Transcript Type= NA
chr17	17868893	17972429	17868893	17972429	-	transcript1857.chr17.nic@TOM1L2	transcript1857.chr17.nic	protein_coding	17972262,17907447,17898596,17893661,17884634,17882705,17879627,17868893	17972429,17907531,17898674,17893810,17884768,17882863,17879743,17869473	Gene ID= ENSG00000175662.17 TPM= 1.93 Transcript Type= NA
chr17	17867655	17869321	17867655	17869321	+	transcript1894.chr17.nnic@NA	transcript1894.chr17.nnic	NA	17867655	17869321	Gene ID= novel_gene_chr17_1895 TPM= 1.93 Transcript Type= NA
chr17	18018262	18040822	18018262	18040822	-	transcript1856.chr17.nnic@ATPAF2	transcript1856.chr17.nnic	protein_coding	18040717,18038881,18028615,18028232,18026319,18024624,18021745,18021123,18018262	18040822,18039050,18028659,18028377,18026416,18024704,18021857,18021238,18018686	Gene ID= ENSG00000171953.15 TPM= 2.9 Transcript Type= NA
chr17	18015059	18039228	18015059	18039228	-	transcript1858.chr17.nic@ATPAF2	transcript1858.chr17.nic	protein_coding	18038881,18028615,18028232,18026319,18024624,18021745,18021123,18015059	18039228,18028659,18028377,18026416,18024704,18021857,18021238,18016260	Gene ID= ENSG00000171953.15 TPM= 3.86 Transcript Type= NA
chr17	18018010	18039168	18018010	18039168	-	ENST00000474627.7@ATPAF2	ENST00000474627.7	protein_coding	18038881,18028615,18028232,18026319,18024624,18021745,18021123,18018010	18039168,18028659,18028377,18026416,18024704,18021857,18021238,18018686	Gene ID= ENSG00000171953.15 TPM= 7.72 Transcript Type= protein_coding
chr17	18002926	18003164	18002926	18003164	-	transcript1896.chr17.nnic@NA	transcript1896.chr17.nnic	NA	18002926	18003164	Gene ID= novel_gene_chr17_1897 TPM= 1.93 Transcript Type= NA
chr17	18039292	18068404	18039292	18068404	+	ENST00000268719.8@GID4	ENST00000268719.8	protein_coding	18039292,18045147,18054127,18058868,18061845,18065180	18039902,18045206,18054234,18058969,18061975,18068404	Gene ID= ENSG00000141034.9 TPM= 19.31 Transcript Type= protein_coding
chr17	18087886	18107971	18087886	18107971	+	ENST00000225729.7@DRG2	ENST00000225729.7	protein_coding	18087886,18093813,18098270,18099017,18099633,18100363,18100569,18101493,18101921,18103801,18104623,18106433,18107154	18088087,18093973,18098359,18099077,18099723,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107971	Gene ID= ENSG00000108591.9 TPM= 69.34 Transcript Type= protein_coding
chr17	18087925	18107959	18087925	18107959	+	ENST00000395726.8@DRG2	ENST00000395726.8	protein_coding	18087925,18093813,18098270,18099017,18099633,18100363,18100569,18101493,18101921,18103801,18104623,18106433,18107154	18088087,18093973,18098359,18099077,18099723,18100435,18100659,18101590,18101997,18103889,18104681,18106470,18107959	Gene ID= ENSG00000108591.9 TPM= 2.25 Transcript Type= protein_coding
chr17	18087968	18107970	18087968	18107970	+	ENST00000467099.6@DRG2	ENST00000467099.6	protein_coding	18087968,18093813,18098270,18099017,18099633,18100569,18101493,18101921,18103801,18104623,18106433,18107154	18088087,18093968,18098359,18099093,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107970	Gene ID= ENSG00000108591.9 TPM= 3.7 Transcript Type= nonsense_mediated_decay
chr17	18183479	18209954	18183479	18209954	+	transcript1870.chr17.nnic@ALKBH5	transcript1870.chr17.nnic	protein_coding	18183479,18194955,18206815,18208219,18209786	18185013,18195035,18206970,18209448,18209954	Gene ID= ENSG00000091542.8 TPM= 42.07 Transcript Type= NA
chr17	18184239	18209954	18184239	18209954	+	ENST00000399138.4@ALKBH5	ENST00000399138.4	protein_coding	18184239,18194955,18206815,18208219	18185013,18195035,18206970,18209954	Gene ID= ENSG00000091542.8 TPM= 109.37 Transcript Type= protein_coding
chr17	18244836	18258933	18244836	18258933	-	transcript1904.chr17.nic@FLII	transcript1904.chr17.nic	protein_coding	18258628,18256909,18256526,18255183,18254769,18254521,18254079,18253544,18253301,18252472,18251999,18251680,18251265,18250838,18249326,18249127,18248800,18248550,18247929,18247657,18247169,18246913,18246594,18246308,18246162,18245934,18245744,18245555,18245354,18244836	18258933,18257019,18256597,18255263,18254854,18254682,18254182,18253719,18253458,18252556,18252146,18251813,18251477,18251017,18249408,18249201,18248883,18248721,18248033,18247848,18247357,18247052,18246828,18246462,18246222,18246062,18245850,18245660,18245419,18245272	Gene ID= ENSG00000177731.15 TPM= 327.5 Transcript Type= NA
chr17	18244836	18258916	18244836	18258916	-	ENST00000327031.8@FLII	ENST00000327031.8	protein_coding	18258628,18256909,18256526,18255183,18254769,18254521,18254079,18253544,18253301,18252472,18251999,18251680,18251265,18250838,18249326,18249127,18248800,18248550,18247929,18247657,18247169,18246913,18246594,18246308,18246162,18245934,18245744,18245555,18245354,18244836	18258916,18257019,18256597,18255263,18254854,18254682,18254182,18253719,18253458,18252556,18252146,18251816,18251477,18251017,18249408,18249201,18248883,18248721,18248033,18247848,18247357,18247052,18246828,18246462,18246222,18246062,18245850,18245660,18245419,18245272	Gene ID= ENSG00000177731.15 TPM= 772.96 Transcript Type= protein_coding
chr17	18244841	18258723	18244841	18258723	-	ENST00000545457.6@FLII	ENST00000545457.6	protein_coding	18258628,18256909,18256526,18255183,18254769,18254079,18253544,18253301,18252472,18251999,18251680,18251265,18250838,18249326,18249127,18248800,18248550,18247929,18247657,18247169,18246913,18246594,18246308,18246162,18245934,18245744,18245555,18245354,18244841	18258723,18257019,18256597,18255263,18254854,18254182,18253719,18253458,18252556,18252146,18251813,18251477,18251017,18249408,18249201,18248883,18248721,18248033,18247848,18247357,18247052,18246828,18246462,18246222,18246062,18245850,18245660,18245419,18245272	Gene ID= ENSG00000177731.15 TPM= 50.67 Transcript Type= protein_coding
chr17	18260566	18265781	18260566	18265781	+	transcript1970.chr17.nnic@MIEF2	transcript1970.chr17.nnic	protein_coding	18260566,18262714,18263086,18263710,18265246	18260737,18262867,18263248,18264764,18265781	Gene ID= ENSG00000177427.12 TPM= 2.9 Transcript Type= NA
chr17	18260565	18266552	18260565	18266552	+	transcript1980.chr17.nnic@MIEF2	transcript1980.chr17.nnic	protein_coding	18260565,18263086,18263710	18260737,18263248,18266552	Gene ID= ENSG00000177427.12 TPM= 1.93 Transcript Type= NA
chr17	18315310	18328055	18315310	18328055	+	ENST00000406438.4@SMCR8	ENST00000406438.4	protein_coding	18315310,18322617	18318149,18328055	Gene ID= ENSG00000176994.10 TPM= 6.76 Transcript Type= protein_coding
chr17	18327873	18363497	18327873	18363497	-	transcript1991.chr17.nic@SHMT1	transcript1991.chr17.nic	protein_coding	18363372,18360414,18355886,18353672,18348325,18347496,18340732,18340043,18335559,18333166,18330555,18329278,18327873	18363497,18360552,18356000,18353817,18348440,18347656,18340813,18340255,18335675,18333288,18330671,18329388,18328919	Gene ID= ENSG00000176974.19 TPM= 5.79 Transcript Type= NA
chr17	18327873	18363487	18327873	18363487	-	ENST00000316694.7@SHMT1	ENST00000316694.7	protein_coding	18363372,18355886,18353672,18348325,18347496,18340732,18340043,18335559,18333166,18330555,18329278,18327873	18363487,18356000,18353817,18348440,18347656,18340813,18340255,18335675,18333288,18330671,18329388,18328919	Gene ID= ENSG00000176974.19 TPM= 15.44 Transcript Type= protein_coding
chr17	18328528	18363451	18328528	18363451	-	ENST00000354098.7@SHMT1	ENST00000354098.7	protein_coding	18363372,18355886,18353672,18348325,18347496,18340732,18340043,18333166,18330555,18329278,18328528	18363451,18356000,18353817,18348440,18347656,18340813,18340255,18333288,18330671,18329388,18328919	Gene ID= ENSG00000176974.19 TPM= 2.9 Transcript Type= protein_coding
chr17	18697998	18736118	18697998	18736118	+	transcript2014.chr17.nic@TRIM16L	transcript2014.chr17.nic	protein_coding	18697998,18699154,18701357,18704619,18705063,18722237,18723770,18727525,18731070,18732039,18734877	18698114,18699275,18701445,18704765,18705164,18722332,18723831,18727758,18731235,18732134,18736118	Gene ID= ENSG00000108448.21 TPM= 5.79 Transcript Type= NA
chr17	18698028	18704547	18698028	18704547	+	ENST00000449697.7@TRIM16L	ENST00000449697.7	protein_coding	18698028,18699154,18699360,18701357,18704129	18698114,18699275,18699457,18701445,18704547	Gene ID= ENSG00000108448.21 TPM= 2.9 Transcript Type= processed_transcript
chr17	18780995	18806714	18780995	18806714	+	ENST00000307767.12@TVP23B	ENST00000307767.12	protein_coding	18780995,18789353,18790896,18797579,18798812,18804138,18805541	18781305,18789435,18791040,18797668,18798943,18804266,18806714	Gene ID= ENSG00000171928.13 TPM= 33.79 Transcript Type= protein_coding
chr17	18858107	18931215	18858107	18931215	+	ENST00000268835.6@PRPSAP2	ENST00000268835.6	protein_coding	18858107,18865469,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540	18858261,18865564,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931215	Gene ID= ENSG00000141127.14 TPM= 2.9 Transcript Type= protein_coding
chr17	18858103	18931268	18858103	18931268	+	transcript2029.chr17.nic@PRPSAP2	transcript2029.chr17.nic	protein_coding	18858103,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540	18858261,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931268	Gene ID= ENSG00000141127.14 TPM= 2.9 Transcript Type= NA
chr17	18968789	19004804	18968789	19004804	-	ENST00000388995.10@FAM83G	ENST00000388995.10	protein_coding	19004709,19003520,18988247,18979549,18977584,18968789	19004804,19004169,18988414,18979673,18978850,18971748	Gene ID= ENSG00000188522.14 TPM= 30.89 Transcript Type= protein_coding
chr17	19020673	19047637	19020673	19047637	-	ENST00000284154.9@GRAP	ENST00000284154.9	protein_coding	19046849,19041807,19035958,19024215,19020673	19047637,19041904,19036080,19024383,19022144	Gene ID= ENSG00000154016.13 TPM= 2.9 Transcript Type= protein_coding
chr17	19237387	19336715	19237387	19336715	+	transcript2043.chr17.nic@EPN2	transcript2043.chr17.nic	protein_coding	19237387,19281955,19282950,19309885,19312052,19313123,19328711,19329561,19331853,19333956	19237531,19282077,19283714,19309997,19312144,19313279,19328887,19329647,19332068,19336715	Gene ID= ENSG00000072134.15 TPM= 7.24 Transcript Type= NA
chr17	19237377	19336715	19237377	19336715	+	ENST00000347697.6@EPN2	ENST00000347697.6	protein_coding	19237377,19281955,19282950,19309885,19312052,19313105,19328711,19329561,19331853,19333956	19237531,19282077,19283714,19309997,19312144,19313279,19328887,19329647,19332068,19336715	Gene ID= ENSG00000072134.15 TPM= 12.07 Transcript Type= protein_coding
chr17	19343170	19362713	19343170	19362713	-	ENST00000261499.8@B9D1	ENST00000261499.8	protein_coding	19362507,19360320,19357840,19347784,19347269,19343790,19343170	19362713,19360388,19357951,19347880,19347331,19343857,19343461	Gene ID= ENSG00000108641.14 TPM= 2.9 Transcript Type= protein_coding
chr17	19378253	19383544	19378253	19383544	+	ENST00000395602.8@MAPK7	ENST00000395602.8	protein_coding	19378253,19378896,19379782,19380608,19381781,19382813,19383078	19378542,19379132,19379947,19381686,19382466,19382946,19383544	Gene ID= ENSG00000166484.19 TPM= 11.58 Transcript Type= protein_coding
chr17	19383442	19387240	19383442	19387240	-	ENST00000299610.4@MFAP4	ENST00000299610.4	protein_coding	19387150,19386760,19386310,19385358,19385099,19383442	19387240,19386838,19386464,19385454,19385281,19384709	Gene ID= ENSG00000166482.11 TPM= 9.65 Transcript Type= protein_coding
chr17	19445970	19446852	19445970	19446852	-	ENST00000458332.1@AC004448.1	ENST00000458332.1	processed_pseudogene	19445970	19446852	Gene ID= ENSG00000189343.7 TPM= 9.65 Transcript Type= processed_pseudogene
chr17	19533810	19579034	19533810	19579034	+	transcript2067.chr17.nic@SLC47A1	transcript2067.chr17.nic	protein_coding	19533810,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19572780,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19572861,19579034	Gene ID= ENSG00000142494.13 TPM= 2.9 Transcript Type= NA
chr17	19533810	19578906	19533810	19578906	+	transcript2070.chr17.nic@SLC47A1	transcript2070.chr17.nic	protein_coding	19533810,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555995,19560188,19560418,19566790,19567096,19571478,19572780,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19556062,19560296,19560493,19566859,19567228,19571572,19572861,19578906	Gene ID= ENSG00000142494.13 TPM= 7.72 Transcript Type= NA
chr17	19533810	19578906	19533810	19578906	+	transcript2077.chr17.nnic@SLC47A1	transcript2077.chr17.nnic	protein_coding	19533810,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19572780,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19572861,19578906	Gene ID= ENSG00000142494.13 TPM= 2.9 Transcript Type= NA
chr17	19533810	19578906	19533810	19578906	+	transcript2078.chr17.nic@SLC47A1	transcript2078.chr17.nic	protein_coding	19533810,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555995,19560188,19560418,19566790,19567096,19572780,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19556062,19560296,19560493,19566859,19567228,19572861,19578906	Gene ID= ENSG00000142494.13 TPM= 1.93 Transcript Type= NA
chr17	19533810	19579034	19533810	19579034	+	transcript2083.chr17.nnic@SLC47A1	transcript2083.chr17.nnic	protein_coding	19533810,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555995,19560188,19560418,19566790,19572780,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19556062,19560296,19560493,19566859,19572861,19579034	Gene ID= ENSG00000142494.13 TPM= 1.93 Transcript Type= NA
chr17	19533903	19578906	19533903	19578906	+	transcript2085.chr17.nnic@SLC47A1	transcript2085.chr17.nnic	protein_coding	19533903,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555995,19560188,19560418,19566790,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19556062,19560296,19560493,19566859,19578906	Gene ID= ENSG00000142494.13 TPM= 1.93 Transcript Type= NA
chr17	19533854	19579034	19533854	19579034	+	ENST00000270570.8@SLC47A1	ENST00000270570.8	protein_coding	19533854,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19571478,19572780,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19571572,19572861,19579034	Gene ID= ENSG00000142494.13 TPM= 14.48 Transcript Type= protein_coding
chr17	19532648	19534346	19532648	19534346	-	transcript2087.chr17.nnic@NA	transcript2087.chr17.nnic	NA	19532648	19534346	Gene ID= novel_gene_chr17_2088 TPM= 2.9 Transcript Type= NA
chr17	19648723	19677596	19648723	19677596	+	ENST00000395575.6@ALDH3A2	ENST00000395575.6	protein_coding	19648723,19648935,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19675558	19648843,19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19677596	Gene ID= ENSG00000072210.18 TPM= 6.76 Transcript Type= protein_coding
chr17	19648751	19677596	19648751	19677596	+	ENST00000339618.8@ALDH3A2	ENST00000339618.8	protein_coding	19648751,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19673151,19675558	19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19673275,19677596	Gene ID= ENSG00000072210.18 TPM= 9.65 Transcript Type= protein_coding
chr17	19770830	19867936	19770830	19867936	-	ENST00000361658.6@ULK2	ENST00000361658.6	protein_coding	19867328,19865736,19864803,19849742,19849369,19846737,19845304,19843121,19841489,19838501,19826139,19825094,19816749,19810378,19804693,19801777,19799495,19797396,19796095,19795622,19785937,19783697,19781889,19780986,19780472,19777581,19776309,19770830	19867936,19865828,19864844,19849774,19849405,19846910,19845377,19843222,19841547,19838583,19826186,19825182,19816920,19810438,19804830,19801922,19799575,19797682,19796282,19795725,19786086,19783905,19782067,19781104,19780629,19777716,19776407,19771067	Gene ID= ENSG00000083290.19 TPM= 4.83 Transcript Type= protein_coding
chr17	19904302	19977837	19904302	19977837	-	ENST00000225737.10@AKAP10	ENST00000225737.10	protein_coding	19977592,19968414,19962840,19958014,19947407,19941826,19940887,19939713,19936286,19931805,19924408,19920036,19909926,19909181,19904302	19977837,19968461,19963022,19958571,19947505,19941910,19941010,19939849,19936430,19931978,19924517,19920118,19909978,19909276,19906232	Gene ID= ENSG00000108599.14 TPM= 1.93 Transcript Type= protein_coding
chr17	19904770	19977831	19904770	19977831	-	transcript2131.chr17.nic@AKAP10	transcript2131.chr17.nic	protein_coding	19977592,19968414,19962840,19958014,19947407,19941826,19939713,19936286,19931805,19924408,19920036,19909926,19909181,19904770	19977831,19968461,19963022,19958571,19947505,19941910,19939849,19936430,19931978,19924517,19920118,19909978,19909276,19906232	Gene ID= ENSG00000108599.14 TPM= 1.93 Transcript Type= NA
chr17	19965857	19977831	19965857	19977831	-	transcript2136.chr17.nic@AKAP10	transcript2136.chr17.nic	protein_coding	19977592,19965857	19977831,19968461	Gene ID= ENSG00000108599.14 TPM= 1.93 Transcript Type= NA
chr17	20999597	21043074	20999597	21043074	-	transcript2139.chr17.nnic@USP22	transcript2139.chr17.nnic	protein_coding	21042665,21028542,21021113,21019084,21017942,21015752,21012830,21011040,21007870,21006896,21004928,21004202,20999597	21043074,21028674,21021226,21019185,21018111,21015899,21012935,21011309,21007996,21006987,21004990,21004351,21003073	Gene ID= ENSG00000124422.11 TPM= 38.13 Transcript Type= NA
chr17	20999593	21043039	20999593	21043039	-	ENST00000261497.8@USP22	ENST00000261497.8	protein_coding	21042665,21028542,21021113,21019084,21017942,21015752,21012830,21011151,21007870,21006896,21004928,21004202,20999593	21043039,21028674,21021226,21019185,21018111,21015899,21012935,21011309,21007996,21006987,21004990,21004351,21003073	Gene ID= ENSG00000124422.11 TPM= 78.67 Transcript Type= protein_coding
chr17	21019347	21022811	21019347	21022811	+	transcript2144.chr17.nnic@NA	transcript2144.chr17.nnic	NA	21019347	21022811	Gene ID= novel_gene_chr17_2145 TPM= 1.93 Transcript Type= NA
chr17	21166178	21191418	21166178	21191418	+	transcript2148.chr17.nnic@DHRS7B	transcript2148.chr17.nnic	protein_coding	21166178,21168390,21168752,21172018,21178233,21183594,21184371,21188711,21190948	21166471,21168530,21168892,21172196,21178342,21183810,21184463,21188863,21191418	Gene ID= ENSG00000109016.17 TPM= 2.25 Transcript Type= NA
chr17	21126936	21191418	21126936	21191418	+	transcript2150.chr17.nnic@DHRS7B	transcript2150.chr17.nnic	protein_coding	21126936,21168752,21172018,21178233,21183594,21184371,21188711,21190948	21126991,21168892,21172196,21178342,21183810,21184463,21188863,21191418	Gene ID= ENSG00000109016.17 TPM= 3.21 Transcript Type= NA
chr17	21126652	21192030	21126652	21192030	+	ENST00000395511.7@DHRS7B	ENST00000395511.7	protein_coding	21126652,21172018,21178233,21183594,21184371,21188711,21190948	21126991,21172196,21178342,21183810,21184463,21188863,21192030	Gene ID= ENSG00000109016.17 TPM= 19.31 Transcript Type= protein_coding
chr17	21166137	21191418	21166137	21191418	+	transcript2156.chr17.nic@DHRS7B	transcript2156.chr17.nic	protein_coding	21166137,21172018,21178233,21183594,21184371,21188711,21190948	21166471,21172196,21178342,21183810,21184463,21188863,21191418	Gene ID= ENSG00000109016.17 TPM= 13.83 Transcript Type= NA
chr17	21126964	21128873	21126964	21128873	+	ENST00000581020.1@DHRS7B	ENST00000581020.1	protein_coding	21126964	21128873	Gene ID= ENSG00000109016.17 TPM= 3.86 Transcript Type= retained_intron
chr17	21197958	21214161	21197958	21214161	-	ENST00000577419.5@TMEM11	ENST00000577419.5	protein_coding	21214091,21210936,21197958	21214161,21211227,21198840	Gene ID= ENSG00000178307.9 TPM= 174.72 Transcript Type= processed_transcript
chr17	21238870	21253410	21238870	21253410	-	ENST00000611551.1@NATD1	ENST00000611551.1	protein_coding	21253159,21244106,21238870	21253410,21244224,21243429	Gene ID= ENSG00000274180.1 TPM= 80.12 Transcript Type= protein_coding
chr17	21284672	21315240	21284672	21315240	+	ENST00000342679.8@MAP2K3	ENST00000342679.8	protein_coding	21284672,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21284969,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315240	Gene ID= ENSG00000034152.18 TPM= 345.9 Transcript Type= protein_coding
chr17	21284672	21315213	21284672	21315213	+	ENST00000395491.6@MAP2K3	ENST00000395491.6	protein_coding	21284672,21296086,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21284969,21296210,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315213	Gene ID= ENSG00000034152.18 TPM= 7.08 Transcript Type= nonsense_mediated_decay
chr17	21288036	21315213	21288036	21315213	+	ENST00000361818.9@MAP2K3	ENST00000361818.9	protein_coding	21288036,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21288091,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315213	Gene ID= ENSG00000034152.18 TPM= 1.28 Transcript Type= protein_coding
chr17	21376197	21419872	21376197	21419872	+	ENST00000583088.5@KCNJ12	ENST00000583088.5	protein_coding	21376197,21408519,21415287	21376913,21408640,21419872	Gene ID= ENSG00000184185.9 TPM= 105.22 Transcript Type= protein_coding
chr17	21376346	21451041	21376346	21451041	+	transcript2186.chr17.nnic@KCNJ12	transcript2186.chr17.nnic	protein_coding	21376346,21408519,21450320	21376913,21408640,21451041	Gene ID= ENSG00000184185.9 TPM= 1.93 Transcript Type= NA
chr17	21376298	21417092	21376298	21417092	+	transcript2189.chr17.nnic@KCNJ12	transcript2189.chr17.nnic	protein_coding	21376298,21415287	21376913,21417092	Gene ID= ENSG00000184185.9 TPM= 6.76 Transcript Type= NA
chr17	21510572	21511779	21510572	21511779	-	transcript2192.chr17.nnic@NA	transcript2192.chr17.nnic	NA	21510572	21511779	Gene ID= novel_gene_chr17_2193 TPM= 2.9 Transcript Type= NA
chr17	21524612	21551669	21524612	21551669	-	transcript2194.chr17.nnic@C17orf51	transcript2194.chr17.nnic	protein_coding	21550996,21535428,21524612	21551669,21535538,21524997	Gene ID= ENSG00000212719.10 TPM= 1.93 Transcript Type= NA
chr17	21528310	21551680	21528310	21551680	-	ENST00000391411.9@C17orf51	ENST00000391411.9	protein_coding	21550996,21528310	21551680,21535538	Gene ID= ENSG00000212719.10 TPM= 7.72 Transcript Type= protein_coding
chr17	27294093	27313631	27294093	27313631	+	ENST00000467843.6@WSB1	ENST00000467843.6	protein_coding	27294093,27301788,27303367,27304780,27306782,27307744,27310061,27311509,27312210	27294435,27301956,27303635,27304911,27306882,27309272,27310174,27311616,27313631	Gene ID= ENSG00000109046.14 TPM= 7.72 Transcript Type= retained_intron
chr17	27294080	27315926	27294080	27315926	+	ENST00000262394.6@WSB1	ENST00000262394.6	protein_coding	27294080,27301788,27303367,27304780,27306782,27309100,27310061,27311509,27312210	27294435,27301956,27303635,27304911,27306882,27309272,27310174,27311616,27315926	Gene ID= ENSG00000109046.14 TPM= 4.83 Transcript Type= protein_coding
chr17	27624923	27626280	27624923	27626280	+	transcript2212.chr17.nnic@NA	transcript2212.chr17.nnic	NA	27624923	27626280	Gene ID= novel_gene_chr17_2213 TPM= 2.9 Transcript Type= NA
chr17	27629798	27649560	27629798	27649560	+	ENST00000302228.9@LGALS9	ENST00000302228.9	protein_coding	27629798,27638263,27640572,27642238,27645314,27645861,27646547,27647030,27647270,27648836	27631304,27638354,27640773,27642348,27645349,27645911,27646588,27647118,27647432,27649560	Gene ID= ENSG00000168961.16 TPM= 2.9 Transcript Type= protein_coding
chr17	28319095	28328685	28319095	28328685	+	ENST00000226230.7@TMEM97	ENST00000226230.7	protein_coding	28319095,28325503,28326534	28319365,28325647,28328685	Gene ID= ENSG00000109084.13 TPM= 6.76 Transcript Type= protein_coding
chr17	28328329	28335449	28328329	28335449	-	ENST00000585089.5@IFT20	ENST00000585089.5	protein_coding	28335340,28332146,28331859,28330443,28329173,28328329	28335449,28332382,28331987,28330528,28329276,28328733	Gene ID= ENSG00000109083.13 TPM= 1.93 Transcript Type= protein_coding
chr17	28335704	28347009	28335704	28347009	+	ENST00000226225.6@TNFAIP1	ENST00000226225.6	protein_coding	28335704,28339408,28340309,28341237,28341404,28342247,28344364	28335856,28339726,28340478,28341326,28341456,28342442,28347009	Gene ID= ENSG00000109079.9 TPM= 45.37 Transcript Type= protein_coding
chr17	28347177	28357522	28347177	28357522	-	ENST00000540200.5@POLDIP2	ENST00000540200.5	protein_coding	28357288,28355795,28354488,28353695,28353241,28352912,28351664,28350766,28350438,28349083,28347177	28357522,28355876,28354585,28353791,28353316,28353019,28351800,28350792,28350563,28349162,28348231	Gene ID= ENSG00000004142.11 TPM= 457.56 Transcript Type= protein_coding
chr17	28352988	28353533	28352988	28353533	+	transcript2258.chr17.nnic@NA	transcript2258.chr17.nnic	NA	28352988	28353533	Gene ID= novel_gene_chr17_2259 TPM= 3.86 Transcript Type= NA
chr17	28357637	28362246	28357637	28362246	+	transcript2240.chr17.nic@TMEM199	transcript2240.chr17.nic	protein_coding	28357637,28358916,28359315,28360151,28360529,28360735,28361157	28357881,28358989,28359404,28360238,28360571,28360847,28362246	Gene ID= ENSG00000244045.12 TPM= 2.9 Transcript Type= NA
chr17	28357581	28363683	28357581	28363683	+	ENST00000292114.7@TMEM199	ENST00000292114.7	protein_coding	28357581,28358916,28359315,28360529,28360735,28361157	28357881,28358989,28359404,28360571,28360847,28363683	Gene ID= ENSG00000244045.12 TPM= 9.65 Transcript Type= protein_coding
chr17	28467822	28468406	28467822	28468406	+	ENST00000571702.1@RPS7P1	ENST00000571702.1	processed_pseudogene	28467822	28468406	Gene ID= ENSG00000263266.2 TPM= 27.03 Transcript Type= processed_pseudogene
chr17	28546707	28552668	28546707	28552668	-	ENST00000335765.8@UNC119	ENST00000335765.8	protein_coding	28552338,28548592,28547999,28547677,28546707	28552668,28548705,28548101,28547849,28547409	Gene ID= ENSG00000109103.11 TPM= 3.86 Transcript Type= protein_coding
chr17	28553387	28571872	28553387	28571872	-	ENST00000308360.7@PIGS	ENST00000308360.7	protein_coding	28571463,28571049,28570852,28563818,28563431,28561422,28560049,28558476,28556827,28556166,28554851,28553387	28571872,28571188,28570963,28563907,28563522,28561629,28560191,28558590,28556972,28556266,28555061,28554495	Gene ID= ENSG00000087111.20 TPM= 40.22 Transcript Type= protein_coding
chr17	28553387	28571536	28553387	28571536	-	ENST00000395346.6@PIGS	ENST00000395346.6	protein_coding	28571049,28570852,28563818,28563431,28561422,28560049,28558476,28556827,28556166,28554851,28553387	28571536,28570963,28563907,28563522,28561629,28560191,28558590,28556972,28556266,28555061,28554495	Gene ID= ENSG00000087111.20 TPM= 18.02 Transcript Type= protein_coding
chr17	28553383	28571528	28553383	28571528	-	ENST00000268758.13@PIGS	ENST00000268758.13	protein_coding	28571463,28570852,28563818,28563431,28561422,28560049,28558476,28556827,28556166,28554851,28553383	28571528,28570963,28563907,28563522,28561629,28560191,28558590,28556972,28556266,28555061,28554495	Gene ID= ENSG00000087111.20 TPM= 8.37 Transcript Type= nonsense_mediated_decay
chr17	28614440	28645131	28614440	28645131	-	ENST00000528896.6@KIAA0100	ENST00000528896.6	protein_coding	28644989,28644058,28643610,28643164,28642869,28642275,28641889,28640560,28639901,28639575,28639315,28638524,28638252,28637836,28636965,28634517,28633895,28633549,28633283,28632942,28632049,28631820,28631479,28628265,28624233,28623760,28621399,28620988,28620509,28619860,28619654,28618791,28617232,28616889,28616618,28616379,28616096,28615664,28614440	28645131,28644187,28643659,28643311,28642987,28642335,28642078,28640683,28640025,28639642,28639460,28638642,28638415,28638094,28637170,28635609,28634086,28633751,28633401,28633162,28632239,28631919,28631681,28628559,28624390,28623966,28621498,28621170,28620630,28620015,28619775,28618971,28617318,28616999,28616753,28616509,28616197,28615798,28615246	Gene ID= ENSG00000007202.14 TPM= 60.81 Transcript Type= protein_coding
chr17	28648356	28662175	28648356	28662175	-	ENST00000247020.8@SDF2	ENST00000247020.8	protein_coding	28661726,28655287,28648356	28662175,28655483,28649276	Gene ID= ENSG00000132581.9 TPM= 14.48 Transcript Type= protein_coding
chr17	28648589	28662185	28648589	28662185	-	ENST00000592250.5@SDF2	ENST00000592250.5	protein_coding	28662046,28655287,28648589	28662185,28655483,28649276	Gene ID= ENSG00000132581.9 TPM= 9.65 Transcript Type= processed_transcript
chr17	28662091	28702684	28662091	28702684	+	ENST00000314616.10@SUPT6H	ENST00000314616.10	protein_coding	28662091,28673371,28674283,28674537,28674970,28675401,28676157,28677715,28678076,28678545,28678821,28681256,28681882,28682727,28682942,28683268,28683621,28684586,28684844,28686339,28686654,28687088,28687304,28688091,28689354,28690082,28690921,28693696,28695352,28696844,28697620,28697906,28699781,28700173,28700346,28700941,28701439	28662342,28673510,28674441,28674613,28675162,28675485,28676430,28677816,28678192,28678634,28678963,28681404,28681980,28682856,28683092,28683422,28683816,28684725,28684961,28686415,28686789,28687225,28687471,28688218,28689561,28690229,28691063,28693836,28695547,28697082,28697733,28698030,28699893,28700250,28700512,28701128,28702684	Gene ID= ENSG00000109111.14 TPM= 17.38 Transcript Type= protein_coding
chr17	28663830	28666156	28663830	28666156	-	transcript2285.chr17.nnic@NA	transcript2285.chr17.nnic	NA	28663830	28666156	Gene ID= novel_gene_chr17_2286 TPM= 10.62 Transcript Type= NA
chr17	28714284	28718415	28714284	28718415	-	ENST00000301043.10@RAB34	ENST00000301043.10	protein_coding	28718122,28717213,28716903,28715993,28715800,28715641,28715456,28715195,28715032,28714793,28714284	28718415,28717425,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 3.86 Transcript Type= protein_coding
chr17	28714281	28717890	28714281	28717890	-	ENST00000395245.8@RAB34	ENST00000395245.8	protein_coding	28717213,28716903,28715993,28715800,28715641,28715456,28715195,28715032,28714793,28714281	28717890,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 5.79 Transcript Type= protein_coding
chr17	28719393	28724359	28719393	28724359	+	ENST00000422514.6@RPL23A	ENST00000422514.6	protein_coding	28719393,28720707,28722723,28723571,28723867	28720030,28720890,28722899,28723640,28724359	Gene ID= ENSG00000198242.13 TPM= 273.18 Transcript Type= protein_coding
chr17	28757377	28842784	28757377	28842784	-	ENST00000582266.5@FAM222B	ENST00000582266.5	protein_coding	28842682,28766586,28757377	28842784,28766707,28759764	Gene ID= ENSG00000173065.13 TPM= 23.65 Transcript Type= protein_coding
chr17	28757390	28812435	28757390	28812435	-	ENST00000452648.7@FAM222B	ENST00000452648.7	protein_coding	28812209,28766586,28757390	28812435,28766707,28759876	Gene ID= ENSG00000173065.13 TPM= 23.65 Transcript Type= protein_coding
chr17	28854938	28861067	28854938	28861067	+	ENST00000254928.9@ERAL1	ENST00000254928.9	protein_coding	28854938,28856264,28856505,28857939,28858146,28858374,28858576,28858964,28859203,28860431	28855317,28856391,28856582,28857985,28858207,28858486,28858824,28859113,28859283,28861067	Gene ID= ENSG00000132591.11 TPM= 76.26 Transcript Type= protein_coding
chr17	28854980	28861059	28854980	28861059	+	transcript2306.chr17.nic@ERAL1	transcript2306.chr17.nic	protein_coding	28854980,28856264,28856505,28857939,28858146,28858374,28858576,28858964,28859203,28860431	28855317,28856391,28856685,28857985,28858207,28858486,28858824,28859113,28859283,28861059	Gene ID= ENSG00000132591.11 TPM= 3.86 Transcript Type= NA
chr17	28879339	28897709	28879339	28897709	-	transcript2316.chr17.nic@FLOT2	transcript2316.chr17.nic	protein_coding	28897526,28888945,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879339	28897709,28889026,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 8.85 Transcript Type= NA
chr17	28879335	28897679	28879335	28897679	-	ENST00000394908.8@FLOT2	ENST00000394908.8	protein_coding	28897526,28888945,28884225,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879335	28897679,28889026,28884315,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 71.6 Transcript Type= protein_coding
chr17	28879341	28897652	28879341	28897652	-	ENST00000585169.5@FLOT2	ENST00000585169.5	protein_coding	28897526,28888945,28885857,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879341	28897652,28889026,28885947,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 8.37 Transcript Type= protein_coding
chr17	28897781	28903071	28897781	28903071	-	ENST00000378895.8@DHRS13	ENST00000378895.8	protein_coding	28902818,28902583,28901493,28900990,28897781	28903071,28902701,28901616,28901301,28898892	Gene ID= ENSG00000167536.13 TPM= 3.86 Transcript Type= protein_coding
chr17	28897781	28903071	28897781	28903071	-	ENST00000394901.7@DHRS13	ENST00000394901.7	protein_coding	28902583,28901493,28900990,28897781	28903071,28901616,28901301,28898892	Gene ID= ENSG00000167536.13 TPM= 1.93 Transcript Type= protein_coding
chr17	29073521	29140393	29073521	29140393	-	transcript2322.chr17.nnic@MYO18A	transcript2322.chr17.nnic	protein_coding	29140340,29137016,29133794,29131383,29127852,29125893,29124653,29122166,29121851,29121547,29120998,29120616,29119335,29118377,29118045,29116444,29115664,29115351,29114907,29114011,29111722,29111424,29110436,29109858,29107080,29103599,29099634,29098826,29098356,29098105,29097788,29097223,29096761,29094936,29094650,29093980,29093323,29092855,29092343,29090810,29090532,29089961,29086936,29086438,29085604,29082316,29079727,29073521	29140393,29137084,29133858,29131442,29128544,29125967,29124688,29122255,29121957,29121725,29121211,29120761,29119437,29118440,29118189,29116455,29115840,29115441,29115099,29114097,29111863,29111583,29110622,29110101,29107189,29103664,29099762,29098969,29098445,29098224,29097899,29097350,29096915,29095059,29094850,29094090,29093427,29093001,29092456,29090926,29090615,29090098,29087121,29086577,29085648,29082438,29081000,29074914	Gene ID= ENSG00000196535.15 TPM= 479.76 Transcript Type= NA
chr17	29085622	29140393	29085622	29140393	-	transcript2325.chr17.nnic@MYO18A	transcript2325.chr17.nnic	protein_coding	29140340,29137016,29133794,29131383,29127852,29125893,29124653,29122166,29121851,29121547,29120998,29120616,29119335,29118377,29118045,29116444,29115664,29115351,29114907,29114011,29111722,29111424,29110436,29109858,29107080,29103599,29099634,29098826,29098356,29098105,29097788,29097223,29096761,29094936,29094650,29093980,29093323,29092855,29092343,29090810,29090532,29089961,29086936,29086438,29085622	29140393,29137084,29133939,29131442,29128544,29125967,29124688,29122255,29121957,29121725,29121211,29120761,29119437,29118440,29118189,29116455,29115840,29115441,29115099,29114097,29111863,29111583,29110622,29110101,29107189,29103664,29099762,29098969,29098445,29098224,29097899,29097350,29096915,29095059,29094850,29094090,29093427,29093001,29092456,29090926,29090615,29090098,29087121,29086577,29085648	Gene ID= ENSG00000196535.15 TPM= 79.16 Transcript Type= NA
chr17	29117706	29130323	29117706	29130323	-	transcript2329.chr17.nnic@MYO18A	transcript2329.chr17.nnic	protein_coding	29127852,29125893,29124653,29122166,29121851,29121547,29120998,29120616,29119340,29118377,29117706	29130323,29125967,29124688,29122255,29121957,29121725,29121211,29120761,29119437,29118446,29118191	Gene ID= ENSG00000196535.15 TPM= 127.74 Transcript Type= NA
chr17	29117706	29130323	29117706	29130323	-	transcript2332.chr17.nnic@MYO18A	transcript2332.chr17.nnic	protein_coding	29127852,29124653,29122166,29121851,29121547,29120998,29120616,29119340,29118377,29117706	29130323,29125967,29122255,29121957,29121725,29121211,29120761,29119437,29118446,29118191	Gene ID= ENSG00000196535.15 TPM= 145.6 Transcript Type= NA
chr17	29122994	29130323	29122994	29130323	-	transcript2336.chr17.nic@MYO18A	transcript2336.chr17.nic	protein_coding	29127852,29122994	29130323,29125967	Gene ID= ENSG00000196535.15 TPM= 137.88 Transcript Type= NA
chr17	29255836	29294118	29255836	29294118	-	ENST00000225388.8@NUFIP2	ENST00000225388.8	protein_coding	29293783,29285992,29267498,29255836	29294118,29287716,29267530,29264591	Gene ID= ENSG00000108256.8 TPM= 7.72 Transcript Type= protein_coding
chr17	29567238	29573157	29567238	29573157	+	transcript2355.chr17.nic@TP53I13	transcript2355.chr17.nic	protein_coding	29567238,29568278,29569018,29569318,29571591,29571857,29572142,29572812	29567411,29568548,29569086,29569359,29571719,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 5.96 Transcript Type= NA
chr17	29568644	29573157	29568644	29573157	+	ENST00000301057.7@TP53I13	ENST00000301057.7	protein_coding	29568644,29569018,29569318,29571591,29571857,29572142,29572812	29568830,29569086,29569359,29571719,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 54.22 Transcript Type= protein_coding
chr17	29568645	29573157	29568645	29573157	+	transcript2366.chr17.nnic@TP53I13	transcript2366.chr17.nnic	protein_coding	29568645,29569018,29569318,29571857,29572142,29572812	29568830,29569086,29569359,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 14.16 Transcript Type= NA
chr17	29573469	29589627	29573469	29589627	-	ENST00000225394.7@GIT1	ENST00000225394.7	protein_coding	29589327,29583483,29582925,29582698,29581927,29581742,29581338,29578731,29578299,29577645,29577136,29576863,29576522,29576220,29576078,29575812,29575630,29575288,29575079,29573469	29589627,29583616,29583037,29582803,29582144,29581836,29581380,29578779,29578371,29577742,29577247,29576996,29576674,29576450,29576131,29575898,29575703,29575470,29575142,29574914	Gene ID= ENSG00000108262.15 TPM= 19.79 Transcript Type= protein_coding
chr17	29580771	29589619	29580771	29589619	-	transcript2364.chr17.nic@GIT1	transcript2364.chr17.nic	protein_coding	29589327,29583483,29582925,29582698,29581927,29581742,29580771	29589619,29583616,29583037,29582803,29582144,29581836,29581380	Gene ID= ENSG00000108262.15 TPM= 1.93 Transcript Type= NA
chr17	29573475	29589549	29573475	29589549	-	ENST00000394869.7@GIT1	ENST00000394869.7	protein_coding	29589327,29583483,29582925,29582698,29581927,29581742,29581338,29578962,29578731,29578299,29577645,29577136,29576863,29576522,29576220,29576078,29575812,29575630,29575288,29575079,29573475	29589549,29583616,29583037,29582803,29582144,29581836,29581380,29578988,29578779,29578371,29577742,29577247,29576996,29576674,29576450,29576131,29575898,29575703,29575470,29575142,29574914	Gene ID= ENSG00000108262.15 TPM= 12.07 Transcript Type= protein_coding
chr17	29614763	29622912	29614763	29622912	-	transcript2379.chr17.nic@CORO6	transcript2379.chr17.nic	protein_coding	29622688,29621224,29619651,29619060,29618790,29617500,29616938,29616702,29616279,29615945,29614763	29622912,29621484,29619773,29619189,29618971,29617619,29617042,29616847,29616336,29616175,29615854	Gene ID= ENSG00000167549.18 TPM= 238.62 Transcript Type= NA
chr17	29614762	29622899	29614762	29622899	-	ENST00000345068.9@CORO6	ENST00000345068.9	protein_coding	29622688,29621224,29619651,29619060,29618790,29617500,29616938,29616702,29616279,29615945,29614762	29622899,29621423,29619773,29619189,29618971,29617619,29617042,29616847,29616336,29616175,29615857	Gene ID= ENSG00000167549.18 TPM= 67.1 Transcript Type= protein_coding
chr17	29614763	29622899	29614763	29622899	-	ENST00000459686.5@CORO6	ENST00000459686.5	protein_coding	29622688,29621224,29619651,29619060,29618790,29616938,29616702,29616279,29615945,29614763	29622899,29621423,29619773,29619189,29618971,29618632,29616847,29616336,29616175,29615854	Gene ID= ENSG00000167549.18 TPM= 76.67 Transcript Type= retained_intron
chr17	29614978	29617469	29614978	29617469	-	ENST00000579388.5@CORO6	ENST00000579388.5	protein_coding	29616938,29616702,29616279,29615945,29614978	29617469,29616847,29616336,29616175,29615857	Gene ID= ENSG00000167549.18 TPM= 18.38 Transcript Type= retained_intron
chr17	29614761	29618920	29614761	29618920	-	transcript2467.chr17.nnic@NA	transcript2467.chr17.nnic	NA	29614761	29618920	Gene ID= novel_gene_chr17_2468 TPM= 8.52 Transcript Type= NA
chr17	29673914	29761390	29673914	29761390	-	ENST00000324677.11@SSH2	ENST00000324677.11	protein_coding	29761150,29702959,29695459,29684563,29677673,29676820,29673914	29761390,29703062,29695523,29684684,29677741,29676885,29674159	Gene ID= ENSG00000141298.17 TPM= 2.9 Transcript Type= processed_transcript
chr17	29759055	29761477	29759055	29761477	-	transcript2484.chr17.nnic@NA	transcript2484.chr17.nnic	NA	29759055	29761477	Gene ID= novel_gene_chr17_2485 TPM= 2.9 Transcript Type= NA
chr17	30116774	30185193	30116774	30185193	+	transcript2489.chr17.nnic@NSRP1	transcript2489.chr17.nnic	protein_coding	30116774,30118080,30163067,30172542,30178071,30179090,30180908,30184615	30116863,30118173,30163162,30172598,30178199,30179297,30181016,30185193	Gene ID= ENSG00000126653.17 TPM= 1.93 Transcript Type= NA
chr17	30116807	30186474	30116807	30186474	+	ENST00000612959.4@NSRP1	ENST00000612959.4	protein_coding	30116807,30172542,30178071,30179090,30180908,30184615	30116863,30172598,30178199,30179297,30181016,30186474	Gene ID= ENSG00000126653.17 TPM= 2.41 Transcript Type= protein_coding
chr17	30116781	30186475	30116781	30186475	+	ENST00000247026.9@NSRP1	ENST00000247026.9	protein_coding	30116781,30118080,30172542,30178071,30179090,30180908,30184615	30116863,30118173,30172598,30178199,30179297,30181016,30186475	Gene ID= ENSG00000126653.17 TPM= 15.93 Transcript Type= protein_coding
chr17	30117761	30120242	30117761	30120242	-	transcript2505.chr17.nnic@NA	transcript2505.chr17.nnic	NA	30117761	30120242	Gene ID= novel_gene_chr17_2506 TPM= 6.76 Transcript Type= NA
chr17	30248195	30291994	30248195	30291994	-	ENST00000261714.10@BLMH	ENST00000261714.10	protein_coding	30291807,30291311,30289373,30287806,30286814,30285388,30274042,30272741,30272561,30271271,30266885,30248195	30291994,30291508,30289482,30287947,30286902,30285480,30274197,30272899,30272628,30271388,30266954,30249168	Gene ID= ENSG00000108578.14 TPM= 77.22 Transcript Type= protein_coding
chr17	30378905	30469989	30378905	30469989	+	ENST00000225719.8@CPD	ENST00000225719.8	protein_coding	30378905,30384989,30420841,30421664,30422674,30423506,30427391,30431772,30438975,30442308,30443802,30445691,30449553,30451711,30455339,30456256,30456462,30461180,30461877,30462370,30464588	30379726,30385236,30420983,30421833,30423023,30423697,30427558,30431881,30439077,30442450,30443971,30446020,30449748,30451846,30455470,30456351,30456526,30461311,30462062,30462469,30469989	Gene ID= ENSG00000108582.11 TPM= 4.83 Transcript Type= protein_coding
chr17	30477377	30522805	30477377	30522805	+	ENST00000451249.6@GOSR1	ENST00000451249.6	protein_coding	30477377,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477464,30481257,30484301,30484770,30490217,30492753,30510909,30520021,30522805	Gene ID= ENSG00000108587.15 TPM= 6.76 Transcript Type= protein_coding
chr17	30477362	30527592	30477362	30527592	+	ENST00000225724.9@GOSR1	ENST00000225724.9	protein_coding	30477362,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477464,30481263,30484301,30484770,30490217,30492753,30510909,30520021,30527592	Gene ID= ENSG00000108587.15 TPM= 6.76 Transcript Type= protein_coding
chr17	30477394	30522609	30477394	30522609	+	transcript2533.chr17.nnic@GOSR1	transcript2533.chr17.nnic	protein_coding	30477394,30481143,30484214,30484663,30492679,30510880,30519939,30522254	30477464,30481257,30484301,30484770,30492753,30510909,30520021,30522609	Gene ID= ENSG00000108587.15 TPM= 1.93 Transcript Type= NA
chr17	30477423	30522609	30477423	30522609	+	ENST00000467337.6@GOSR1	ENST00000467337.6	protein_coding	30477423,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477486,30481257,30484301,30484770,30490217,30492753,30510909,30520021,30522609	Gene ID= ENSG00000108587.15 TPM= 6.76 Transcript Type= protein_coding
chr17	30477442	30522558	30477442	30522558	+	ENST00000414833.2@GOSR1	ENST00000414833.2	protein_coding	30477442,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477486,30481263,30484301,30484770,30490217,30492753,30510909,30520021,30522558	Gene ID= ENSG00000108587.15 TPM= 18.34 Transcript Type= protein_coding
chr17	30731644	30770050	30731644	30770050	+	transcript2547.chr17.nic@SUZ12P1	transcript2547.chr17.nic	transcribed_unprocessed_pseudogene	30731644,30734897,30735033,30743301,30759491,30766503,30768834,30769872	30732123,30734943,30735097,30743369,30759539,30766588,30769064,30770050	Gene ID= ENSG00000264538.6 TPM= 2.41 Transcript Type= NA
chr17	30731644	30770050	30731644	30770050	+	transcript2548.chr17.nnic@SUZ12P1	transcript2548.chr17.nnic	transcribed_unprocessed_pseudogene	30731644,30734897,30735033,30759491,30766503,30768834,30769872	30732123,30734943,30735097,30759539,30766588,30769064,30770050	Gene ID= ENSG00000264538.6 TPM= 2.41 Transcript Type= NA
chr17	30782684	30824776	30782684	30824776	-	ENST00000324238.6@CRLF3	ENST00000324238.6	protein_coding	30824523,30803901,30797311,30796160,30793450,30792440,30785919,30782684	30824776,30804108,30797398,30796337,30793672,30792572,30786031,30784443	Gene ID= ENSG00000176390.11 TPM= 5.79 Transcript Type= protein_coding
chr17	30898983	30906820	30898983	30906820	-	ENST00000581216.5@TEFM	ENST00000581216.5	protein_coding	30906168,30904066,30900413,30898983	30906820,30904529,30900562,30899606	Gene ID= ENSG00000172171.10 TPM= 3.86 Transcript Type= protein_coding
chr17	30921932	30958220	30921932	30958220	+	ENST00000580525.5@ADAP2	ENST00000580525.5	protein_coding	30921932,30922940,30926809,30931889,30934185,30944907,30949287,30953288,30954478,30956241,30957835	30922108,30923070,30926918,30931968,30934297,30945053,30949370,30953350,30954555,30956469,30958220	Gene ID= ENSG00000184060.10 TPM= 2.9 Transcript Type= protein_coding
chr17	30971036	30999909	30971036	30999909	+	transcript2559.chr17.nnic@RNF135	transcript2559.chr17.nnic	protein_coding	30971036,30984617,30987944,30997242,30997457,30998662	30971445,30984760,30988106,30997331,30997662,30999909	Gene ID= ENSG00000181481.13 TPM= 2.9 Transcript Type= NA
chr17	30970201	30999911	30970201	30999911	+	ENST00000328381.9@RNF135	ENST00000328381.9	protein_coding	30970201,30984617,30987944,30997242,30998662	30971445,30984760,30988106,30997331,30999911	Gene ID= ENSG00000181481.13 TPM= 12.55 Transcript Type= protein_coding
chr17	30971056	30999909	30971056	30999909	+	transcript2562.chr17.nnic@RNF135	transcript2562.chr17.nnic	protein_coding	30971056,30984617,30987944,30997242,30998662	30971746,30984760,30988106,30997331,30999909	Gene ID= ENSG00000181481.13 TPM= 1.93 Transcript Type= NA
chr17	30971054	30999909	30971054	30999909	+	transcript2564.chr17.nic@RNF135	transcript2564.chr17.nic	protein_coding	30971054,30987944,30997242,30998662	30971445,30988106,30997331,30999909	Gene ID= ENSG00000181481.13 TPM= 1.93 Transcript Type= NA
chr17	31094927	31377677	31094927	31377677	+	ENST00000358273.8@NF1	ENST00000358273.8	protein_coding	31094927,31155983,31159010,31163186,31169891,31181422,31181710,31182508,31200422,31201037,31201411,31206240,31214451,31219005,31221850,31223444,31225095,31226435,31227218,31227523,31229025,31229835,31230260,31230842,31232073,31232700,31233002,31235611,31235918,31248984,31252938,31258344,31259032,31260369,31261711,31265229,31325820,31327499,31330296,31334838,31336333,31336635,31337368,31337819,31338025,31338704,31340505,31343009,31349120,31350183,31352257,31356460,31356960,31357269,31358480,31358969,31360487,31374013	31095369,31156126,31159093,31163376,31169997,31181489,31181785,31182665,31200595,31201159,31201485,31206371,31214585,31219118,31221929,31223567,31225250,31226684,31227291,31227606,31229465,31229974,31230382,31230925,31232189,31232881,31233213,31235772,31236021,31249119,31253000,31258502,31259129,31260515,31261857,31265339,31326252,31327839,31330498,31335031,31336473,31336914,31337582,31337880,31338139,31338805,31340645,31343135,31349251,31350318,31352414,31356582,31357090,31357369,31358622,31359015,31360703,31377677	Gene ID= ENSG00000196712.17 TPM= 1.93 Transcript Type= protein_coding
chr17	31559218	31560578	31559218	31560578	+	transcript2570.chr17.nnic@NA	transcript2570.chr17.nnic	NA	31559218	31560578	Gene ID= novel_gene_chr17_2571 TPM= 1.93 Transcript Type= NA
chr17	31851864	31859337	31851864	31859337	-	ENST00000302362.10@COPRS	ENST00000302362.10	protein_coding	31859101,31856799,31852812,31851864	31859337,31856865,31853030,31852308	Gene ID= ENSG00000172301.10 TPM= 39.58 Transcript Type= protein_coding
chr17	31863173	31901753	31863173	31901753	-	transcript2575.chr17.nic@UTP6	transcript2575.chr17.nic	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31880573,31878702,31878250,31875234,31873673,31873378,31868046,31866655,31865366,31863173	31901753,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31878781,31878327,31875413,31873753,31873487,31868112,31866715,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 8.37 Transcript Type= NA
chr17	31860899	31901765	31860899	31901765	-	ENST00000261708.8@UTP6	ENST00000261708.8	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31880573,31878702,31878250,31875234,31873673,31873378,31868046,31865366,31860899	31901765,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31878781,31878327,31875413,31873753,31873487,31868112,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 63.71 Transcript Type= protein_coding
chr17	31863173	31901688	31863173	31901688	-	transcript2579.chr17.nnic@UTP6	transcript2579.chr17.nnic	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31880573,31878702,31878250,31875234,31873673,31873378,31868046,31865366,31863173	31901688,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31880754,31878781,31878327,31875413,31873753,31873487,31868112,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 2.58 Transcript Type= NA
chr17	31863173	31901753	31863173	31901753	-	transcript2580.chr17.nnic@UTP6	transcript2580.chr17.nnic	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31880573,31878250,31875234,31873673,31873378,31868046,31865366,31863173	31901753,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31878327,31875413,31873753,31873487,31868112,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 2.58 Transcript Type= NA
chr17	31936999	31993277	31936999	31993277	+	transcript2595.chr17.nic@SUZ12	transcript2595.chr17.nic	protein_coding	31936999,31940286,31940422,31947617,31966147,31973146,31975482,31976521,31982999,31988320,31993242	31937520,31940332,31940486,31947685,31966196,31973231,31975713,31976614,31983104,31988497,31993277	Gene ID= ENSG00000178691.10 TPM= 3.86 Transcript Type= NA
chr17	31937018	32001045	31937018	32001045	+	ENST00000322652.9@SUZ12	ENST00000322652.9	protein_coding	31937018,31940286,31940422,31947617,31966147,31973146,31975482,31976521,31982999,31988320,31993242,31993865,31994564,31995564,31996798,31998658	31937520,31940332,31940486,31947685,31966196,31973231,31975713,31976614,31983104,31988497,31993333,31994008,31994721,31995762,31996877,32001045	Gene ID= ENSG00000178691.10 TPM= 5.79 Transcript Type= protein_coding
chr17	32142454	32225770	32142454	32225770	+	ENST00000333942.10@RHOT1	ENST00000333942.10	protein_coding	32142454,32171043,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32224616	32142729,32171101,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32225770	Gene ID= ENSG00000126858.16 TPM= 7.72 Transcript Type= protein_coding
chr17	32142560	32225666	32142560	32225666	+	ENST00000354266.7@RHOT1	ENST00000354266.7	protein_coding	32142560,32171047,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32224616	32142729,32171101,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32225666	Gene ID= ENSG00000126858.16 TPM= 2.9 Transcript Type= protein_coding
chr17	32350117	32381886	32350117	32381886	+	ENST00000394670.8@ZNF207	ENST00000394670.8	protein_coding	32350117,32351786,32358503,32360598,32360892,32361468,32362914,32365330,32366665,32367772,32369295,32369599	32350326,32351912,32358641,32360765,32360967,32361515,32362984,32365487,32366757,32368014,32369454,32381886	Gene ID= ENSG00000010244.18 TPM= 24.62 Transcript Type= protein_coding
chr17	32350132	32370451	32350132	32370451	+	ENST00000321233.10@ZNF207	ENST00000321233.10	protein_coding	32350132,32351786,32358503,32360598,32360892,32362914,32365330,32366665,32367772,32369295,32369599	32350326,32351912,32358641,32360765,32360967,32362984,32365487,32366757,32368014,32369454,32370451	Gene ID= ENSG00000010244.18 TPM= 6.27 Transcript Type= protein_coding
chr17	32444261	32483318	32444261	32483318	+	ENST00000261712.7@PSMD11	ENST00000261712.7	protein_coding	32444261,32446945,32454495,32464049,32464521,32468999,32473801,32474764,32477521,32479251,32479851,32480146,32480489,32480753	32444614,32447046,32454619,32464120,32464578,32469193,32473945,32474824,32477583,32479376,32479886,32480197,32480631,32483318	Gene ID= ENSG00000108671.9 TPM= 596.8 Transcript Type= protein_coding
chr17	32486619	32491256	32486619	32491256	+	ENST00000313401.3@CDK5R1	ENST00000313401.3	protein_coding	32486619,32487476	32487162,32491256	Gene ID= ENSG00000176749.8 TPM= 4.83 Transcript Type= protein_coding
chr17	32927937	32944315	32927937	32944315	+	ENST00000579849.5@TMEM98	ENST00000579849.5	protein_coding	32927937,32931327,32931475,32933174,32934291,32936332,32939477,32940786	32928237,32931402,32931659,32933305,32934324,32936447,32939536,32944315	Gene ID= ENSG00000006042.11 TPM= 1.93 Transcript Type= protein_coding
chr17	34255285	34257203	34255285	34257203	+	ENST00000225831.4@CCL2	ENST00000225831.4	protein_coding	34255285,34256222,34256722	34255425,34256339,34257203	Gene ID= ENSG00000108691.9 TPM= 2.9 Transcript Type= protein_coding
chr17	34927919	35063721	34927919	35063721	-	transcript2656.chr17.nnic@CCT6B	transcript2656.chr17.nnic	protein_coding	35063576,35026374,35021371,35017523,35016370,35014740,35012114,34983216,34954426,34951950,34942484,34940539,34939617,34939183,34932367,34930949,34928962,34927919	35063721,35026561,35021781,35017606,35016580,35014763,35012149,34983316,34954599,34952053,34942643,34940621,34939713,34939330,34932500,34931051,34929034,34928117	Gene ID= ENSG00000132141.13 TPM= 1.93 Transcript Type= NA
chr17	35000609	35004195	35000609	35004195	+	transcript2672.chr17.nic@LIG3	transcript2672.chr17.nic	protein_coding	35000609,35001909,35002668	35001403,35002104,35004195	Gene ID= ENSG00000005156.11 TPM= 1.93 Transcript Type= NA
chr17	35009118	35063852	35009118	35063852	-	ENST00000394597.6@RFFL	ENST00000394597.6	protein_coding	35063576,35026374,35021371,35017523,35016370,35014740,35009118	35063852,35026561,35021781,35017606,35016580,35014763,35012149	Gene ID= ENSG00000092871.16 TPM= 15.93 Transcript Type= protein_coding
chr17	35005990	35089319	35005990	35089319	-	ENST00000315249.11@RFFL	ENST00000315249.11	protein_coding	35089105,35026374,35021371,35017523,35016370,35014740,35005990	35089319,35026561,35021781,35017606,35016580,35014763,35012149	Gene ID= ENSG00000092871.16 TPM= 7.24 Transcript Type= protein_coding
chr17	35009118	35063721	35009118	35063721	-	transcript2667.chr17.nic@RFFL	transcript2667.chr17.nic	protein_coding	35063576,35026374,35017523,35016370,35014740,35009118	35063721,35026561,35017606,35016580,35014763,35012149	Gene ID= ENSG00000092871.16 TPM= 5.79 Transcript Type= NA
chr17	35009118	35089322	35009118	35089322	-	transcript2668.chr17.nic@RFFL	transcript2668.chr17.nic	protein_coding	35089105,35026374,35017523,35016370,35014740,35009118	35089322,35026561,35017606,35016580,35014763,35012149	Gene ID= ENSG00000092871.16 TPM= 4.83 Transcript Type= NA
chr17	35100383	35119860	35100383	35119860	-	transcript2687.chr17.nic@RAD51D	transcript2687.chr17.nic	protein_coding	35119532,35119111,35118501,35107366,35106386,35103454,35103254,35101201,35100383	35119860,35119172,35118619,35107447,35106481,35103544,35103324,35101365,35101036	Gene ID= ENSG00000185379.20 TPM= 1.93 Transcript Type= NA
chr17	35131347	35142315	35131347	35142315	-	ENST00000442241.8@NLE1	ENST00000442241.8	protein_coding	35142258,35141979,35139849,35139235,35137814,35137543,35137001,35136362,35136169,35135249,35133339,35133171,35131347	35142315,35142122,35140066,35139314,35137890,35137640,35137193,35136497,35136215,35135451,35133498,35133241,35132449	Gene ID= ENSG00000073536.17 TPM= 5.79 Transcript Type= protein_coding
chr17	35147809	35186963	35147809	35186963	+	transcript2704.chr17.nnic@UNC45B	transcript2704.chr17.nnic	protein_coding	35147809,35148264,35148973,35150048,35152893,35154574,35155296,35163995,35168061,35169837,35170114,35171322,35174242,35175968,35177017,35177495,35180559,35183427,35186299	35147910,35148431,35149009,35150223,35152982,35154741,35155464,35164166,35168361,35169931,35170255,35171462,35174369,35176034,35177130,35177610,35180676,35183582,35186963	Gene ID= ENSG00000141161.11 TPM= 6.76 Transcript Type= NA
chr17	35147809	35188291	35147809	35188291	+	transcript2712.chr17.nic@UNC45B	transcript2712.chr17.nic	protein_coding	35147809,35148264,35148973,35150048,35152893,35154574,35155296,35159375,35163995,35168061,35171322,35174242,35175968,35177017,35177495,35180559,35183427,35186299	35147910,35148431,35149009,35150223,35152982,35154741,35155464,35159545,35164166,35168361,35171462,35174369,35176034,35177130,35177610,35180676,35183582,35188291	Gene ID= ENSG00000141161.11 TPM= 10.38 Transcript Type= NA
chr17	35147841	35189337	35147841	35189337	+	ENST00000394570.6@UNC45B	ENST00000394570.6	protein_coding	35147841,35148264,35148973,35150048,35152893,35154574,35155296,35159375,35163995,35168061,35169837,35170114,35171322,35174242,35175968,35177017,35177495,35180559,35183427,35186299	35147910,35148431,35149009,35150223,35152982,35154741,35155464,35159545,35164166,35168361,35169931,35170255,35171462,35174369,35176034,35177130,35177610,35180676,35183582,35189337	Gene ID= ENSG00000141161.11 TPM= 4.34 Transcript Type= protein_coding
chr17	35237396	35239721	35237396	35239721	+	transcript2718.chr17.nnic@NA	transcript2718.chr17.nnic	NA	35237396	35239721	Gene ID= novel_gene_chr17_2719 TPM= 1.93 Transcript Type= NA
chr17	35243036	35273655	35243036	35273655	+	ENST00000299977.8@SLFN5	ENST00000299977.8	protein_coding	35243036,35258651,35260971,35264183,35265072	35243143,35259702,35261096,35264903,35273655	Gene ID= ENSG00000166750.9 TPM= 4.83 Transcript Type= protein_coding
chr17	35243076	35245805	35243076	35245805	+	transcript2724.chr17.nnic@NA	transcript2724.chr17.nnic	NA	35243076	35245805	Gene ID= novel_gene_chr17_2725 TPM= 1.93 Transcript Type= NA
chr17	35313463	35324900	35313463	35324900	+	transcript2726.chr17.nic@AC022706.1	transcript2726.chr17.nic	lincRNA	35313463,35321735,35323148,35324654	35313706,35321865,35323268,35324900	Gene ID= ENSG00000267364.1 TPM= 4.83 Transcript Type= NA
chr17	35350578	35373622	35350578	35373622	-	transcript2730.chr17.nic@SLFN11	transcript2730.chr17.nic	protein_coding	35373474,35367603,35366947,35362739,35360243,35353336,35350578	35373622,35367700,35367063,35363826,35360371,35354059,35353139	Gene ID= ENSG00000172716.16 TPM= 1.93 Transcript Type= NA
chr17	35574795	35578629	35574795	35578629	-	ENST00000225873.8@PEX12	ENST00000225873.8	protein_coding	35577896,35577038,35574795	35578629,35577591,35576181	Gene ID= ENSG00000108733.9 TPM= 4.83 Transcript Type= protein_coding
chr17	35587323	35660120	35587323	35660120	+	transcript2738.chr17.nic@AP2B1	transcript2738.chr17.nic	protein_coding	35587323,35594008,35598230,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599,35659764	35587428,35594067,35598335,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791,35660120	Gene ID= ENSG00000006125.17 TPM= 5.79 Transcript Type= NA
chr17	35731649	35743521	35731649	35743521	+	ENST00000603017.1@RASL10B	ENST00000603017.1	protein_coding	35731649,35735038,35740409,35741035	35731878,35735400,35740533,35743521	Gene ID= ENSG00000270885.1 TPM= 25.1 Transcript Type= protein_coding
chr17	35983294	35986758	35983294	35986758	-	ENST00000618404.4@CCL14	ENST00000618404.4	protein_coding	35986571,35984338,35983294	35986758,35984452,35983888	Gene ID= ENSG00000276409.4 TPM= 1.93 Transcript Type= protein_coding
chr17	36475918	36483088	36475918	36483088	-	transcript2755.chr17.nnic@NA	transcript2755.chr17.nnic	NA	36482991,36482461,36475918	36483088,36482569,36476597	Gene ID= novel_gene_chr17_2756 TPM= 1.93 Transcript Type= NA
chr17	36486635	36495822	36486635	36495822	+	ENST00000617429.4@ZNHIT3	ENST00000617429.4	protein_coding	36486635,36486935,36492813,36493926,36495223	36486785,36486966,36492899,36494006,36495822	Gene ID= ENSG00000273611.4 TPM= 20.27 Transcript Type= protein_coding
chr17	36513086	36534868	36513086	36534868	-	ENST00000621344.4@MYO19	ENST00000621344.4	protein_coding	36534761,36533953,36532527,36528064,36527551,36525228,36515858,36515113,36514446,36513629,36513086	36534868,36534104,36532681,36528202,36527699,36525341,36515990,36515182,36514548,36513725,36513505	Gene ID= ENSG00000278259.4 TPM= 10.62 Transcript Type= protein_coding
chr17	36535555	36539310	36535555	36539310	+	ENST00000620233.1@PIGW	ENST00000620233.1	protein_coding	36535555,36537094	36535601,36539310	Gene ID= ENSG00000277161.1 TPM= 3.86 Transcript Type= protein_coding
chr17	36544888	36589848	36544888	36589848	+	ENST00000613102.4@GGNBP2	ENST00000613102.4	protein_coding	36544888,36545619,36554820,36557083,36560773,36567663,36577983,36579245,36581344,36585300,36585840,36586050,36586997,36589208	36545097,36545817,36554900,36557336,36560871,36567776,36578186,36579419,36581538,36585450,36585965,36586198,36587245,36589848	Gene ID= ENSG00000278311.4 TPM= 11.78 Transcript Type= protein_coding
chr17	36545475	36589848	36545475	36589848	+	transcript2777.chr17.nic@GGNBP2	transcript2777.chr17.nic	protein_coding	36545475,36554820,36557083,36560773,36567663,36577983,36579245,36581344,36585300,36585840,36586050,36586997,36589208	36545817,36554900,36557336,36560871,36567776,36578186,36579419,36581538,36585450,36585965,36586198,36587245,36589848	Gene ID= ENSG00000278311.4 TPM= 5.98 Transcript Type= NA
chr17	36544912	36547747	36544912	36547747	+	ENST00000611219.1@GGNBP2	ENST00000611219.1	protein_coding	36544912,36545619	36545097,36547747	Gene ID= ENSG00000278311.4 TPM= 1.93 Transcript Type= protein_coding
chr17	36591798	36600806	36591798	36600806	+	ENST00000618403.4@DHRS11	ENST00000618403.4	protein_coding	36591798,36594971,36598163,36598921,36599671,36599972,36600162	36592156,36595180,36598257,36599050,36599763,36600037,36600806	Gene ID= ENSG00000278535.4 TPM= 18.18 Transcript Type= protein_coding
chr17	36591815	36600804	36591815	36600804	+	transcript2791.chr17.nic@DHRS11	transcript2791.chr17.nic	protein_coding	36591815,36594971,36598163,36598921,36599972,36600162	36592156,36595180,36598257,36599050,36600037,36600804	Gene ID= ENSG00000278535.4 TPM= 5.15 Transcript Type= NA
chr17	36591842	36600804	36591842	36600804	+	transcript2792.chr17.nnic@DHRS11	transcript2792.chr17.nnic	protein_coding	36591842,36598163,36598921,36599671,36599972,36600162	36592156,36598257,36599050,36599763,36600037,36600804	Gene ID= ENSG00000278535.4 TPM= 3.7 Transcript Type= NA
chr17	36591915	36597013	36591915	36597013	+	ENST00000612205.1@DHRS11	ENST00000612205.1	protein_coding	36591915,36594971,36596828	36592156,36595180,36597013	Gene ID= ENSG00000278535.4 TPM= 3.86 Transcript Type= processed_transcript
chr17	36601572	36608971	36601572	36608971	+	ENST00000614766.4@MRM1	ENST00000614766.4	protein_coding	36601572,36602553,36607670,36607899,36608243	36602352,36602646,36607802,36608018,36608971	Gene ID= ENSG00000278619.4 TPM= 6.76 Transcript Type= protein_coding
chr17	36948875	37056871	36948875	37056871	+	ENST00000619387.4@AATF	ENST00000619387.4	protein_coding	36948875,36950214,36952886,36953770,36986617,36988519,36989247,36990774,37019005,37020934,37031614,37056601	36949216,36950405,36953296,36953907,36986731,36988720,36989411,36990857,37019072,37021014,37031685,37056871	Gene ID= ENSG00000275700.4 TPM= 69.5 Transcript Type= protein_coding
chr17	37328645	37359136	37328645	37359136	-	transcript2810.chr17.nic@ACACA	transcript2810.chr17.nic	protein_coding	37358999,37339804,37330173,37328645	37359136,37339850,37330425,37328986	Gene ID= ENSG00000278540.4 TPM= 1.93 Transcript Type= NA
chr17	37085454	37086989	37085454	37086989	-	transcript2812.chr17.nnic@NA	transcript2812.chr17.nnic	NA	37085454	37086989	Gene ID= novel_gene_chr17_2813 TPM= 1.93 Transcript Type= NA
chr17	37406205	37407062	37406205	37407062	-	transcript2824.chr17.nnic@NA	transcript2824.chr17.nnic	NA	37406205	37407062	Gene ID= novel_gene_chr17_2825 TPM= 2.9 Transcript Type= NA
chr17	37406874	37479730	37406874	37479730	+	ENST00000615182.4@TADA2A	ENST00000615182.4	protein_coding	37406874,37411269,37423509,37426950,37437738,37440505,37442564,37444696,37458524,37462078,37465431,37467454,37470400,37471094,37474556,37476797	37406949,37411390,37423615,37427009,37437829,37440662,37442652,37444768,37458587,37462121,37465541,37467525,37470532,37471137,37474629,37479730	Gene ID= ENSG00000276234.4 TPM= 1.93 Transcript Type= protein_coding
chr17	37489831	37513501	37489831	37513501	+	ENST00000617516.4@DUSP14	ENST00000617516.4	protein_coding	37489831,37510677,37512181	37489958,37510764,37513501	Gene ID= ENSG00000276023.4 TPM= 15.44 Transcript Type= protein_coding
chr17	37514797	37609496	37514797	37609496	-	ENST00000612223.4@SYNRG	ENST00000612223.4	protein_coding	37609279,37600363,37596223,37586419,37585325,37584648,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37553115,37541972,37540380,37539192,37538324,37535979,37520538,37520179,37514797	37609496,37600403,37596344,37586549,37585430,37584759,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059,37542565,37540543,37539245,37538420,37536127,37520648,37520214,37519071	Gene ID= ENSG00000275066.4 TPM= 1.45 Transcript Type= protein_coding
chr17	37550502	37609422	37550502	37609422	-	transcript2833.chr17.nic@SYNRG	transcript2833.chr17.nic	protein_coding	37609279,37600363,37596223,37586419,37585325,37584648,37579132,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37550502	37609422,37600403,37596344,37586549,37585430,37584759,37579434,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059	Gene ID= ENSG00000275066.4 TPM= 15.93 Transcript Type= NA
chr17	37619768	37643482	37619768	37643482	-	transcript2846.chr17.nic@DDX52	transcript2846.chr17.nic	protein_coding	37643334,37642110,37633288,37632113,37630030,37628561,37626788,37625895,37624344,37621398,37621127,37620873,37619768	37643482,37642308,37633418,37632298,37630173,37628672,37626860,37626098,37624434,37621520,37621277,37620948,37619839	Gene ID= ENSG00000278053.4 TPM= 5.79 Transcript Type= NA
chr17	37978155	38005485	37978155	38005485	-	transcript2849.chr17.nnic@TBC1D3L	transcript2849.chr17.nnic	protein_coding	38005437,37985878,37985315,37984764,37984325,37983028,37982364,37981556,37981106,37980543,37980020,37978155	38005485,37987652,37985395,37984871,37984434,37983076,37982484,37981650,37981171,37980642,37980172,37979038	Gene ID= ENSG00000274512.5 TPM= 6.76 Transcript Type= NA
chr17	38195740	38257388	38195740	38257388	-	transcript2860.chr17.nnic@AC244154.1	transcript2860.chr17.nnic	unprocessed_pseudogene	38256898,38242201,38219046,38208995,38205635,38202781,38202238,38202072,38201105,38197546,38196367,38195740	38257388,38242285,38219123,38209116,38205742,38202981,38202334,38202105,38201219,38197710,38196471,38195940	Gene ID= ENSG00000274487.1 TPM= 36.68 Transcript Type= NA
chr17	38297066	38323217	38297066	38323217	+	transcript2873.chr17.nnic@MRPL45	transcript2873.chr17.nnic	protein_coding	38297066,38298449,38299351,38306533,38318687,38320618,38322126,38322509	38297249,38298626,38299468,38306631,38318735,38320746,38322299,38323217	Gene ID= ENSG00000278845.4 TPM= 5.31 Transcript Type= NA
chr17	38297023	38323218	38297023	38323218	+	ENST00000613675.4@MRPL45	ENST00000613675.4	protein_coding	38297023,38298449,38299351,38306533,38318687,38320618,38322126,38322509	38297249,38298626,38299468,38306631,38318735,38320767,38322299,38323218	Gene ID= ENSG00000278845.4 TPM= 102.81 Transcript Type= protein_coding
chr17	38702452	38704747	38702452	38704747	+	ENST00000612330.1@AC006449.6	ENST00000612330.1	lincRNA	38702452	38704747	Gene ID= ENSG00000277969.1 TPM= 1.93 Transcript Type= lincRNA
chr17	38727135	38728092	38727135	38728092	-	transcript2915.chr17.nnic@NA	transcript2915.chr17.nnic	NA	38727135	38728092	Gene ID= novel_gene_chr17_2916 TPM= 4.83 Transcript Type= NA
chr17	38752736	38764231	38752736	38764231	+	ENST00000619426.4@PSMB3	ENST00000619426.4	protein_coding	38752736,38753150,38755883,38760431,38762411,38764119	38752829,38753334,38755990,38760608,38762505,38764231	Gene ID= ENSG00000277791.4 TPM= 113.91 Transcript Type= protein_coding
chr17	38765691	38799514	38765691	38799514	-	transcript2895.chr17.nnic@PIP4K2B	transcript2895.chr17.nnic	protein_coding	38799266,38786823,38784243,38780452,38779383,38778334,38777717,38765691	38799514,38786920,38784339,38780604,38779529,38778372,38777800,38769254	Gene ID= ENSG00000276293.4 TPM= 1.93 Transcript Type= NA
chr17	38765689	38799905	38765689	38799905	-	ENST00000619039.4@PIP4K2B	ENST00000619039.4	protein_coding	38799266,38786823,38784243,38780452,38779383,38778334,38777687,38771014,38770436,38765689	38799905,38786920,38784339,38780604,38779529,38778372,38777800,38771272,38770539,38769771	Gene ID= ENSG00000276293.4 TPM= 38.61 Transcript Type= protein_coding
chr17	38800434	38825481	38800434	38825481	-	ENST00000614790.4@CWC25	ENST00000614790.4	protein_coding	38825166,38820901,38814861,38812795,38810468,38809702,38806765,38806297,38802700,38800434	38825481,38821073,38815097,38812864,38810595,38809765,38806976,38806395,38802861,38802206	Gene ID= ENSG00000273559.4 TPM= 5.79 Transcript Type= protein_coding
chr17	38847867	38853843	38847867	38853843	-	ENST00000479035.6@RPL23	ENST00000479035.6	protein_coding	38853698,38853022,38852604,38850362,38847867	38853843,38853105,38852732,38850475,38850214	Gene ID= ENSG00000125691.12 TPM= 130.32 Transcript Type= protein_coding
chr17	38869859	38921770	38869859	38921770	+	ENST00000318008.10@LASP1	ENST00000318008.10	protein_coding	38869859,38878086,38890420,38898412,38914325,38915043,38918605	38870258,38878180,38890504,38898519,38914475,38915146,38921770	Gene ID= ENSG00000002834.17 TPM= 21.24 Transcript Type= protein_coding
chr17	39173801	39197705	39173801	39197705	-	transcript2933.chr17.nic@CACNB1	transcript2933.chr17.nic	protein_coding	39197412,39194884,39191474,39187479,39186793,39186496,39185950,39184784,39184325,39184031,39183713,39177984,39177350,39173801	39197705,39194970,39191593,39187601,39186929,39186572,39186104,39184864,39184383,39184140,39183864,39178079,39177535,39175657	Gene ID= ENSG00000067191.15 TPM= 24.46 Transcript Type= NA
chr17	39177136	39197703	39177136	39197703	-	ENST00000344140.5@CACNB1	ENST00000344140.5	protein_coding	39197412,39194884,39191474,39187479,39186793,39186496,39185950,39184784,39184325,39184031,39183713,39177984,39177136	39197703,39194970,39191593,39187601,39186929,39186572,39186104,39184864,39184383,39184140,39183864,39178079,39177535	Gene ID= ENSG00000067191.15 TPM= 510 Transcript Type= protein_coding
chr17	39177136	39197702	39177136	39197702	-	ENST00000394310.7@CACNB1	ENST00000394310.7	protein_coding	39197412,39194884,39191474,39187479,39186793,39186496,39185131,39184784,39184325,39184031,39183713,39177984,39177136	39197702,39194970,39191593,39187601,39186929,39186572,39185150,39184864,39184383,39184140,39183864,39178079,39177535	Gene ID= ENSG00000067191.15 TPM= 4.97 Transcript Type= protein_coding
chr17	39177136	39193546	39177136	39193546	-	transcript2955.chr17.nic@CACNB1	transcript2955.chr17.nic	protein_coding	39193449,39191474,39187479,39186793,39186496,39185950,39184784,39184325,39184031,39183713,39177984,39177136	39193546,39191593,39187601,39186929,39186572,39186104,39184864,39184383,39184140,39183864,39178079,39177535	Gene ID= ENSG00000067191.15 TPM= 76.66 Transcript Type= NA
chr17	39200283	39204727	39200283	39204727	+	ENST00000225430.8@RPL19	ENST00000225430.8	protein_coding	39200283,39201213,39202317,39202989,39204077,39204525	39200349,39201319,39202439,39203109,39204187,39204727	Gene ID= ENSG00000108298.9 TPM= 797.13 Transcript Type= protein_coding
chr17	39200316	39204727	39200316	39204727	+	ENST00000579374.5@RPL19	ENST00000579374.5	protein_coding	39200316,39201222,39202317,39202989,39204077,39204525	39200349,39201319,39202439,39203109,39204187,39204727	Gene ID= ENSG00000108298.9 TPM= 15.08 Transcript Type= protein_coding
chr17	39200342	39204711	39200342	39204711	+	ENST00000579260.5@RPL19	ENST00000579260.5	protein_coding	39200342,39201213,39202317,39202989,39204077,39204525	39200743,39201319,39202439,39203109,39204187,39204711	Gene ID= ENSG00000108298.9 TPM= 9.36 Transcript Type= protein_coding
chr17	39200345	39204720	39200345	39204720	+	ENST00000582193.5@RPL19	ENST00000582193.5	protein_coding	39200345,39201213,39202317,39202989,39204077,39204525	39200478,39201319,39202439,39203109,39204187,39204720	Gene ID= ENSG00000108298.9 TPM= 18.46 Transcript Type= protein_coding
chr17	39256997	39258784	39256997	39258784	-	transcript2974.chr17.nnic@NA	transcript2974.chr17.nnic	NA	39256997	39258784	Gene ID= novel_gene_chr17_2975 TPM= 1.93 Transcript Type= NA
chr17	39252644	39401663	39252644	39401663	-	ENST00000264658.10@FBXL20	ENST00000264658.10	protein_coding	39401361,39343180,39303585,39301001,39298990,39297127,39285478,39282729,39281389,39274970,39270796,39268827,39265397,39264175,39252644	39401663,39343241,39303639,39301075,39299084,39297195,39285573,39282855,39281463,39275100,39270856,39268871,39265453,39264387,39261567	Gene ID= ENSG00000108306.11 TPM= 3.86 Transcript Type= protein_coding
chr17	39406601	39451286	39406601	39451286	-	ENST00000300651.10@MED1	ENST00000300651.10	protein_coding	39451038,39447798,39443550,39440623,39440386,39439165,39434249,39431942,39431115,39427701,39424627,39423697,39423327,39419717,39415244,39415026,39406601	39451286,39447904,39443628,39440677,39440518,39439193,39434320,39432016,39431188,39427790,39424738,39423821,39423445,39419918,39415339,39415131,39410721	Gene ID= ENSG00000125686.11 TPM= 2.9 Transcript Type= protein_coding
chr17	39461477	39462445	39461477	39462445	+	transcript2984.chr17.nnic@NA	transcript2984.chr17.nnic	NA	39461477	39462445	Gene ID= novel_gene_chr17_2985 TPM= 1.93 Transcript Type= NA
chr17	39637049	39663484	39637049	39663484	+	transcript2988.chr17.nic@STARD3	transcript2988.chr17.nic	protein_coding	39637049,39653481,39657008,39657775,39657973,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657839,39658026,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 7.89 Transcript Type= NA
chr17	39637049	39663484	39637049	39663484	+	transcript2991.chr17.nic@STARD3	transcript2991.chr17.nic	protein_coding	39637049,39653481,39657008,39657775,39657973,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657839,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 4.03 Transcript Type= NA
chr17	39637049	39663484	39637049	39663484	+	transcript2992.chr17.nic@STARD3	transcript2992.chr17.nic	protein_coding	39637049,39653481,39657008,39657775,39657973,39658405,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657852,39658026,39658522,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 7.24 Transcript Type= NA
chr17	39637065	39663484	39637065	39663484	+	ENST00000336308.9@STARD3	ENST00000336308.9	protein_coding	39637065,39653481,39657008,39657775,39657973,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657852,39658026,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 37.81 Transcript Type= protein_coding
chr17	39664990	39666555	39664990	39666555	+	transcript2996.chr17.nnic@TCAP	transcript2996.chr17.nnic	protein_coding	39664990,39665373,39665716	39665200,39665469,39666555	Gene ID= ENSG00000173991.5 TPM= 686.68 Transcript Type= NA
chr17	39664187	39666555	39664187	39666555	+	ENST00000309889.2@TCAP	ENST00000309889.2	protein_coding	39664187,39665716	39665469,39666555	Gene ID= ENSG00000173991.5 TPM= 2239.52 Transcript Type= protein_coding
chr17	39667151	39670475	39667151	39670475	+	transcript3027.chr17.nnic@PNMT	transcript3027.chr17.nnic	protein_coding	39667151,39669629,39669951	39667307,39669836,39670475	Gene ID= ENSG00000141744.3 TPM= 1.93 Transcript Type= NA
chr17	39668158	39670475	39668158	39670475	+	ENST00000269582.2@PNMT	ENST00000269582.2	protein_coding	39668158,39669629,39669951	39668677,39669836,39670475	Gene ID= ENSG00000141744.3 TPM= 3.86 Transcript Type= protein_coding
chr17	39671122	39688107	39671122	39688107	-	ENST00000300658.8@PGAP3	ENST00000300658.8	protein_coding	39687834,39685922,39684597,39674617,39673993,39673514,39673051,39671122	39688107,39686019,39684749,39674679,39674054,39673650,39673255,39672866	Gene ID= ENSG00000161395.13 TPM= 4.83 Transcript Type= protein_coding
chr17	39729156	39730787	39729156	39730787	-	ENST00000394231.7@MIEN1	ENST00000394231.7	protein_coding	39730407,39730194,39729685,39729156	39730787,39730291,39729761,39729605	Gene ID= ENSG00000141741.11 TPM= 35.72 Transcript Type= protein_coding
chr17	39921041	39927601	39921041	39927601	-	ENST00000304046.6@ORMDL3	ENST00000304046.6	protein_coding	39927484,39924030,39923112,39921041	39927601,39924225,39923263,39922685	Gene ID= ENSG00000172057.9 TPM= 1.93 Transcript Type= protein_coding
chr17	39980830	39992033	39980830	39992033	+	transcript3053.chr17.nic@PSMD3	transcript3053.chr17.nic	protein_coding	39980830,39984294,39986575,39988683,39989739	39981190,39984484,39986712,39988819,39992033	Gene ID= ENSG00000108344.14 TPM= 9.65 Transcript Type= NA
chr17	39980797	39997960	39980797	39997960	+	ENST00000264639.8@PSMD3	ENST00000264639.8	protein_coding	39980797,39984294,39986575,39988683,39989739,39990094,39994954,39995176,39995424,39996183,39997330,39997504	39981190,39984484,39986712,39988819,39989929,39990197,39995068,39995295,39995527,39996338,39997380,39997960	Gene ID= ENSG00000108344.14 TPM= 437.6 Transcript Type= protein_coding
chr17	39980830	39981810	39980830	39981810	+	transcript3054.chr17.nnic@NA	transcript3054.chr17.nnic	NA	39980830	39981810	Gene ID= novel_gene_chr17_3055 TPM= 4.83 Transcript Type= NA
chr17	39980830	39983556	39980830	39983556	+	transcript3056.chr17.nnic@NA	transcript3056.chr17.nnic	NA	39980830	39983556	Gene ID= novel_gene_chr17_3057 TPM= 4.83 Transcript Type= NA
chr17	40015447	40017813	40015447	40017813	+	ENST00000331769.6@CSF3	ENST00000331769.6	protein_coding	40015447,40016233,40016485,40016795	40015845,40016340,40016631,40017813	Gene ID= ENSG00000108342.12 TPM= 20.75 Transcript Type= protein_coding
chr17	40015714	40017812	40015714	40017812	+	transcript3067.chr17.nnic@NA	transcript3067.chr17.nnic	NA	40015714	40017812	Gene ID= novel_gene_chr17_3068 TPM= 10.14 Transcript Type= NA
chr17	40019102	40054417	40019102	40054417	-	transcript3073.chr17.nic@MED24	transcript3073.chr17.nic	protein_coding	40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102	40054417,40053657,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 26.08 Transcript Type= NA
chr17	40019102	40054424	40019102	40054424	-	transcript3075.chr17.nic@MED24	transcript3075.chr17.nic	protein_coding	40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102	40054424,40053635,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40029004,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 16.59 Transcript Type= NA
chr17	40019102	40032434	40019102	40032434	-	transcript3086.chr17.nic@MED24	transcript3086.chr17.nic	protein_coding	40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102	40032434,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 27.53 Transcript Type= NA
chr17	40019097	40054092	40019097	40054092	-	ENST00000394126.5@MED24	ENST00000394126.5	protein_coding	40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019097	40054092,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 22.55 Transcript Type= protein_coding
chr17	40019102	40054405	40019102	40054405	-	ENST00000394128.6@MED24	ENST00000394128.6	protein_coding	40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102	40054405,40053635,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 46.35 Transcript Type= protein_coding
chr17	40062810	40093867	40062810	40093867	+	ENST00000264637.8@THRA	ENST00000264637.8	protein_coding	40062810,40074192,40076871,40077508,40083835,40084610,40086707,40088242,40089206,40093020	40063092,40074541,40076938,40077608,40083982,40084815,40086853,40088500,40089333,40093867	Gene ID= ENSG00000126351.12 TPM= 6.27 Transcript Type= protein_coding
chr17	40062810	40093867	40062810	40093867	+	ENST00000584985.5@THRA	ENST00000584985.5	protein_coding	40062810,40074192,40076871,40077508,40083835,40084610,40086707,40088242,40089206,40093137	40063092,40074541,40076938,40077608,40083982,40084815,40086853,40088500,40089333,40093867	Gene ID= ENSG00000126351.12 TPM= 2.41 Transcript Type= protein_coding
chr17	40062899	40092627	40062899	40092627	+	ENST00000450525.6@THRA	ENST00000450525.6	protein_coding	40062899,40074192,40076871,40077508,40083835,40084610,40086707,40088242,40089206	40063092,40074541,40076938,40077608,40083982,40084815,40086853,40088500,40092627	Gene ID= ENSG00000126351.12 TPM= 27.99 Transcript Type= protein_coding
chr17	40092787	40100725	40092787	40100725	-	ENST00000246672.3@NR1D1	ENST00000246672.3	protein_coding	40100064,40097065,40096691,40096443,40095444,40094935,40093912,40092787	40100725,40097403,40096779,40096587,40096087,40095120,40094122,40093282	Gene ID= ENSG00000126368.5 TPM= 93.64 Transcript Type= protein_coding
chr17	40122324	40130293	40122324	40130293	+	transcript3110.chr17.nnic@MSL1	transcript3110.chr17.nnic	protein_coding	40122324,40122578,40126183,40129245	40122509,40123380,40126406,40130293	Gene ID= ENSG00000188895.11 TPM= 2.9 Transcript Type= NA
chr17	40122298	40136916	40122298	40136916	+	ENST00000398532.8@MSL1	ENST00000398532.8	protein_coding	40122298,40126183,40129245,40131537,40132034,40133042,40133534,40133827,40134279	40123380,40126406,40129627,40131584,40132098,40133109,40133658,40133899,40136916	Gene ID= ENSG00000188895.11 TPM= 4.83 Transcript Type= protein_coding
chr17	40122573	40130293	40122573	40130293	+	ENST00000577454.5@MSL1	ENST00000577454.5	protein_coding	40122573,40126183,40129245	40123380,40126406,40130293	Gene ID= ENSG00000188895.11 TPM= 26.06 Transcript Type= protein_coding
chr17	40140502	40172167	40140502	40172167	+	transcript3117.chr17.nnic@CASC3	transcript3117.chr17.nnic	protein_coding	40140502,40141207,40141570,40161753,40162002,40162725,40163481,40166797,40167498,40167850,40168203,40169324,40169598,40170452	40140779,40141234,40141607,40161911,40162153,40162901,40164166,40166861,40167612,40167948,40168417,40169446,40169662,40172167	Gene ID= ENSG00000108349.16 TPM= 10.78 Transcript Type= NA
chr17	40140502	40169731	40140502	40169731	+	transcript3120.chr17.nic@CASC3	transcript3120.chr17.nic	protein_coding	40140502,40141207,40141570,40161753,40162002,40162725,40163481,40166797,40167498,40167850,40168203,40169324,40169598	40140779,40141234,40141607,40161911,40162153,40162901,40164166,40166861,40167612,40167948,40168417,40169446,40169731	Gene ID= ENSG00000108349.16 TPM= 2.58 Transcript Type= NA
chr17	40140323	40172183	40140323	40172183	+	ENST00000264645.11@CASC3	ENST00000264645.11	protein_coding	40140323,40141207,40141570,40161753,40162002,40162725,40163481,40166797,40167498,40167850,40168203,40169324,40169598,40170447	40140779,40141234,40141607,40161911,40162153,40162901,40164166,40166861,40167612,40167948,40168417,40169446,40169662,40172183	Gene ID= ENSG00000108349.16 TPM= 22.37 Transcript Type= protein_coding
chr17	40340867	40343136	40340867	40343136	-	ENST00000581080.1@RARA-AS1	ENST00000581080.1	antisense_RNA	40342876,40341996,40340867	40343136,40342690,40341700	Gene ID= ENSG00000265666.1 TPM= 2.9 Transcript Type= antisense_RNA
chr17	40360652	40364703	40360652	40364703	-	transcript3141.chr17.nnic@NA	transcript3141.chr17.nnic	NA	40360652	40364703	Gene ID= novel_gene_chr17_3142 TPM= 2.9 Transcript Type= NA
chr17	40362793	40365452	40362793	40365452	+	transcript3139.chr17.nnic@NA	transcript3139.chr17.nnic	NA	40362793	40365452	Gene ID= novel_gene_chr17_3140 TPM= 8.69 Transcript Type= NA
chr17	40443461	40457731	40443461	40457731	+	ENST00000269593.4@IGFBP4	ENST00000269593.4	protein_coding	40443461,40452985,40453928,40456449	40444084,40453142,40454062,40457731	Gene ID= ENSG00000141753.6 TPM= 258.7 Transcript Type= protein_coding
chr17	40627719	40647834	40627719	40647834	-	transcript3150.chr17.nic@SMARCE1	transcript3150.chr17.nic	protein_coding	40647773,40645796,40645576,40642455,40637492,40636395,40635931,40632195,40631592,40630714,40630208,40627719	40647834,40645847,40645619,40642559,40637572,40636526,40636102,40632367,40631693,40630924,40630286,40628993	Gene ID= ENSG00000073584.18 TPM= 5.31 Transcript Type= NA
chr17	40640574	40647814	40640574	40647814	-	ENST00000474246.1@SMARCE1	ENST00000474246.1	protein_coding	40647773,40645796,40645576,40640574	40647814,40645847,40645619,40642559	Gene ID= ENSG00000073584.18 TPM= 3.38 Transcript Type= protein_coding
chr17	40648300	40649718	40648300	40649718	+	ENST00000619697.1@AC073508.3	ENST00000619697.1	antisense_RNA	40648300	40649718	Gene ID= ENSG00000278834.1 TPM= 3.86 Transcript Type= antisense_RNA
chr17	40818117	40819128	40818117	40819128	-	transcript3167.chr17.nnic@KRT10	transcript3167.chr17.nnic	protein_coding	40819112,40818787,40818117	40819128,40819069,40818482	Gene ID= ENSG00000186395.7 TPM= 34.27 Transcript Type= NA
chr17	40818117	40822595	40818117	40822595	-	ENST00000269576.5@KRT10	ENST00000269576.5	protein_coding	40821959,40821035,40820511,40820262,40820049,40819517,40818787,40818117	40822595,40821117,40820667,40820423,40820174,40819734,40819161,40818482	Gene ID= ENSG00000186395.7 TPM= 34.27 Transcript Type= protein_coding
chr17	40818117	40818983	40818117	40818983	-	ENST00000635956.1@KRT10	ENST00000635956.1	protein_coding	40818767,40818117	40818983,40818482	Gene ID= ENSG00000186395.7 TPM= 3.86 Transcript Type= protein_coding
chr17	41523617	41528308	41523617	41528308	-	ENST00000361566.7@KRT19	ENST00000361566.7	protein_coding	41527828,41525191,41524843,41524379,41524143,41523617	41528308,41525273,41524999,41524540,41524268,41523997	Gene ID= ENSG00000171345.13 TPM= 3.86 Transcript Type= protein_coding
chr17	41688885	41691646	41688885	41691646	+	transcript3173.chr17.nnic@EIF1	transcript3173.chr17.nnic	protein_coding	41688885,41688921,41689778,41690088,41690782	41688894,41689069,41689941,41690189,41691646	Gene ID= ENSG00000173812.10 TPM= 223.39 Transcript Type= NA
chr17	41688893	41692668	41688893	41692668	+	ENST00000469257.1@EIF1	ENST00000469257.1	protein_coding	41688893,41689778,41690088,41690782	41689069,41689941,41690189,41692668	Gene ID= ENSG00000173812.10 TPM= 83.98 Transcript Type= protein_coding
chr17	41688885	41691646	41688885	41691646	+	ENST00000462917.1@EIF1	ENST00000462917.1	protein_coding	41688885,41690782	41690189,41691646	Gene ID= ENSG00000173812.10 TPM= 15.44 Transcript Type= retained_intron
chr17	41688895	41691622	41688895	41691622	+	ENST00000482111.1@EIF1	ENST00000482111.1	protein_coding	41688895,41689778,41690782	41689069,41690189,41691622	Gene ID= ENSG00000173812.10 TPM= 6.35 Transcript Type= retained_intron
chr17	41688901	41691630	41688901	41691630	+	ENST00000310837.8@EIF1	ENST00000310837.8	protein_coding	41688901,41690088,41690782	41689069,41690189,41691630	Gene ID= ENSG00000173812.10 TPM= 16.49 Transcript Type= processed_transcript
chr17	41754604	41786711	41754604	41786711	-	transcript3208.chr17.nnic@JUP	transcript3208.chr17.nnic	protein_coding	41786566,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41755730,41754604	41786711,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895,41755432	Gene ID= ENSG00000173801.16 TPM= 26.3 Transcript Type= NA
chr17	41754604	41786698	41754604	41786698	-	ENST00000310706.9@JUP	ENST00000310706.9	protein_coding	41786588,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41755730,41754604	41786698,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895,41755432	Gene ID= ENSG00000173801.16 TPM= 42.72 Transcript Type= protein_coding
chr17	41754604	41786711	41754604	41786711	-	transcript3211.chr17.nnic@JUP	transcript3211.chr17.nnic	protein_coding	41786566,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41754604	41786711,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895	Gene ID= ENSG00000173801.16 TPM= 7.48 Transcript Type= NA
chr17	41754604	41786698	41754604	41786698	-	ENST00000393931.7@JUP	ENST00000393931.7	protein_coding	41786588,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41754604	41786698,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895	Gene ID= ENSG00000173801.16 TPM= 21 Transcript Type= protein_coding
chr17	41812962	41818974	41812962	41818974	+	transcript3218.chr17.nic@FKBP10	transcript3218.chr17.nic	protein_coding	41812962,41817058,41818089,41818382	41813279,41817203,41818278,41818974	Gene ID= ENSG00000141756.18 TPM= 1.93 Transcript Type= NA
chr17	41825181	41836229	41825181	41836229	-	transcript3221.chr17.nic@NT5C3B	transcript3221.chr17.nic	protein_coding	41836079,41835859,41835203,41835070,41832392,41830801,41828790,41827426,41825181	41836229,41835957,41835272,41835116,41832477,41830890,41828952,41827626,41825657	Gene ID= ENSG00000141698.16 TPM= 3.21 Transcript Type= NA
chr17	41825181	41836258	41825181	41836258	-	ENST00000523903.5@NT5C3B	ENST00000523903.5	protein_coding	41835859,41835203,41835070,41832392,41830801,41828790,41827426,41825181	41836258,41835272,41835116,41832477,41830890,41828952,41827626,41825657	Gene ID= ENSG00000141698.16 TPM= 11.9 Transcript Type= retained_intron
chr17	41825227	41836228	41825227	41836228	-	ENST00000470690.5@NT5C3B	ENST00000470690.5	protein_coding	41835588,41835203,41835070,41832392,41830801,41828790,41827426,41825227	41836228,41835272,41835116,41832477,41830890,41828952,41827626,41825657	Gene ID= ENSG00000141698.16 TPM= 2.25 Transcript Type= retained_intron
chr17	41866931	41919019	41866931	41919019	-	ENST00000353196.5@ACLY	ENST00000353196.5	protein_coding	41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41866931	41919019,41913896,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904	Gene ID= ENSG00000131473.16 TPM= 2.41 Transcript Type= protein_coding
chr17	41866908	41918987	41866908	41918987	-	ENST00000352035.6@ACLY	ENST00000352035.6	protein_coding	41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41896620,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41866908	41918987,41913896,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41896649,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904	Gene ID= ENSG00000131473.16 TPM= 16.41 Transcript Type= protein_coding
chr17	41866917	41918962	41866917	41918962	-	ENST00000590151.5@ACLY	ENST00000590151.5	protein_coding	41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41896620,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41866917	41918962,41913900,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41896649,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904	Gene ID= ENSG00000131473.16 TPM= 14.96 Transcript Type= protein_coding
chr17	41966815	41975176	41966815	41975176	+	ENST00000393888.1@CNP	ENST00000393888.1	protein_coding	41966815,41968073,41971892,41973475	41966887,41968740,41972031,41975176	Gene ID= ENSG00000173786.16 TPM= 41.51 Transcript Type= protein_coding
chr17	41976452	42017451	41976452	42017451	-	transcript3235.chr17.nic@DNAJC7	transcript3235.chr17.nic	protein_coding	42017340,42003359,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41987819,41983563,41982255,41981855,41977261,41976452	42017451,42003557,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910,41983636,41982401,41982007,41977323,41976770	Gene ID= ENSG00000168259.14 TPM= 11.1 Transcript Type= NA
chr17	41976433	42017653	41976433	42017653	-	ENST00000457167.8@DNAJC7	ENST00000457167.8	protein_coding	42017340,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41987819,41983563,41982255,41981855,41977261,41976433	42017653,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910,41983636,41982401,41982007,41977323,41976770	Gene ID= ENSG00000168259.14 TPM= 60.81 Transcript Type= protein_coding
chr17	41986531	42017431	41986531	42017431	-	transcript3244.chr17.nic@DNAJC7	transcript3244.chr17.nic	protein_coding	42017340,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41986531	42017431,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910	Gene ID= ENSG00000168259.14 TPM= 2.41 Transcript Type= NA
chr17	42020062	42025641	42020062	42025641	+	transcript3257.chr17.nnic@NKIRAS2	transcript3257.chr17.nnic	protein_coding	42020062,42021564,42022399,42023654,42025563	42020204,42021671,42022640,42024281,42025641	Gene ID= ENSG00000168256.17 TPM= 9.97 Transcript Type= NA
chr17	42020051	42025058	42020051	42025058	+	ENST00000393885.8@NKIRAS2	ENST00000393885.8	protein_coding	42020051,42021564,42022399,42023654	42020204,42021671,42022640,42025058	Gene ID= ENSG00000168256.17 TPM= 24.45 Transcript Type= protein_coding
chr17	42020097	42024774	42020097	42024774	+	ENST00000393881.7@NKIRAS2	ENST00000393881.7	protein_coding	42020097,42021545,42022399,42023654	42020204,42021671,42022640,42024774	Gene ID= ENSG00000168256.17 TPM= 20.59 Transcript Type= protein_coding
chr17	42101404	42112733	42101404	42112733	-	ENST00000251642.7@DHX58	ENST00000251642.7	protein_coding	42112605,42112113,42111725,42111296,42110723,42109270,42107982,42107604,42105736,42105018,42104766,42103608,42102216,42101404	42112733,42112205,42111893,42111497,42110913,42109386,42108108,42107795,42105989,42105167,42104927,42103798,42102312,42101946	Gene ID= ENSG00000108771.12 TPM= 3.86 Transcript Type= protein_coding
chr17	42113118	42121058	42113118	42121058	-	ENST00000465682.5@KAT2A	ENST00000465682.5	protein_coding	42120966,42120706,42120225,42120030,42119537,42119054,42118297,42117907,42117678,42117388,42117035,42115723,42114892,42114490,42114358,42114219,42114000,42113118	42121058,42120829,42120370,42120119,42119718,42119436,42118403,42118017,42117814,42117596,42117161,42115833,42115035,42114604,42114394,42114282,42114084,42113842	Gene ID= ENSG00000108773.10 TPM= 12.55 Transcript Type= nonsense_mediated_decay
chr17	42124978	42154976	42124978	42154976	-	transcript3275.chr17.nic@RAB5C	transcript3275.chr17.nic	protein_coding	42154893,42137762,42130337,42128649,42128261,42126755,42124978	42154976,42137878,42130590,42128800,42128383,42126848,42125898	Gene ID= ENSG00000108774.14 TPM= 25.1 Transcript Type= NA
chr17	42124976	42155017	42124976	42155017	-	ENST00000346213.8@RAB5C	ENST00000346213.8	protein_coding	42154893,42130337,42128649,42128261,42126755,42124976	42155017,42130590,42128800,42128383,42126848,42125898	Gene ID= ENSG00000108774.14 TPM= 58.88 Transcript Type= protein_coding
chr17	42189088	42194494	42189088	42194494	-	ENST00000414034.7@GHDC	ENST00000414034.7	protein_coding	42194393,42193767,42193317,42192906,42192241,42191018,42190832,42190624,42190185,42189088	42194494,42193850,42193594,42193027,42192742,42191210,42190903,42190757,42190359,42189921	Gene ID= ENSG00000167925.15 TPM= 1.93 Transcript Type= protein_coding
chr17	42189088	42194195	42189088	42194195	-	ENST00000301671.12@GHDC	ENST00000301671.12	protein_coding	42193767,42193317,42192906,42192241,42191018,42190832,42190624,42190185,42189088	42194195,42193594,42193027,42192742,42191210,42190903,42190757,42190270,42189921	Gene ID= ENSG00000167925.15 TPM= 5.79 Transcript Type= protein_coding
chr17	42199168	42276448	42199168	42276448	-	transcript3291.chr17.nnic@STAT5B	transcript3291.chr17.nnic	protein_coding	42276248,42232000,42224779,42223382,42219712,42219312,42218723,42218151,42217377,42217160,42216014,42211984,42210403,42210171,42207558,42202757,42202340,42199168	42276448,42232137,42224868,42223556,42219842,42219463,42218878,42218330,42217464,42217282,42216106,42212190,42210497,42210301,42207728,42202808,42202447,42201864	Gene ID= ENSG00000173757.9 TPM= 4.83 Transcript Type= NA
chr17	42199168	42276406	42199168	42276406	-	ENST00000293328.7@STAT5B	ENST00000293328.7	protein_coding	42276248,42232000,42227529,42224779,42223382,42219712,42219312,42218723,42218151,42217377,42217160,42216014,42211984,42210403,42210171,42207558,42202757,42202340,42199168	42276406,42232137,42227685,42224868,42223556,42219842,42219463,42218878,42218330,42217464,42217282,42216106,42212190,42210497,42210301,42207728,42202808,42202447,42201864	Gene ID= ENSG00000173757.9 TPM= 85.91 Transcript Type= protein_coding
chr17	42287547	42311943	42287547	42311943	+	ENST00000345506.8@STAT5A	ENST00000345506.8	protein_coding	42287547,42288056,42289402,42289866,42291972,42295619,42299751,42300130,42300715,42301275,42304342,42304530,42305610,42306241,42307402,42307593,42308178,42309047,42309377,42310507	42287635,42288598,42289539,42290022,42292061,42295793,42299881,42300281,42300870,42301454,42304429,42304652,42305702,42306447,42307496,42307723,42308333,42309098,42309484,42311943	Gene ID= ENSG00000126561.16 TPM= 57.44 Transcript Type= protein_coding
chr17	42288479	42311938	42288479	42311938	+	transcript3295.chr17.nnic@STAT5A	transcript3295.chr17.nnic	protein_coding	42288479,42289402,42289866,42291972,42295619,42299751,42300130,42300715,42301275,42304342,42304530,42305610,42306241,42307402,42307593,42308178,42310507	42288598,42289539,42290022,42292061,42295793,42299881,42300281,42300870,42301454,42304429,42304652,42305702,42306447,42307496,42307723,42308333,42311938	Gene ID= ENSG00000126561.16 TPM= 7.24 Transcript Type= NA
chr17	42313324	42388568	42313324	42388568	-	ENST00000264657.9@STAT3	ENST00000264657.9	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42313324	42388568,42348539,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316901,42315800	Gene ID= ENSG00000168610.14 TPM= 118.9 Transcript Type= protein_coding
chr17	42314854	42388439	42314854	42388439	-	ENST00000585517.5@STAT3	ENST00000585517.5	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42314854	42388439,42348520,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316851,42315800	Gene ID= ENSG00000168610.14 TPM= 45.78 Transcript Type= protein_coding
chr17	42315559	42388414	42315559	42388414	-	ENST00000404395.3@STAT3	ENST00000404395.3	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322285,42317182,42316789,42315559	42388414,42348517,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316901,42315800	Gene ID= ENSG00000168610.14 TPM= 22.64 Transcript Type= protein_coding
chr17	42387610	42388577	42387610	42388577	-	transcript3351.chr17.nnic@NA	transcript3351.chr17.nnic	NA	42387610	42388577	Gene ID= novel_gene_chr17_3352 TPM= 4.83 Transcript Type= NA
chr17	42402452	42423280	42402452	42423280	-	transcript3355.chr17.nnic@CAVIN1	transcript3355.chr17.nnic	protein_coding	42422627,42404536,42402452	42423280,42405388,42404373	Gene ID= ENSG00000177469.12 TPM= 21.72 Transcript Type= NA
chr17	42402452	42423517	42402452	42423517	-	ENST00000357037.5@CAVIN1	ENST00000357037.5	protein_coding	42422627,42402452	42423517,42405388	Gene ID= ENSG00000177469.12 TPM= 210.92 Transcript Type= protein_coding
chr17	42409897	42423199	42409897	42423199	-	transcript3361.chr17.nnic@CAVIN1	transcript3361.chr17.nnic	protein_coding	42422627,42409897	42423199,42412250	Gene ID= ENSG00000177469.12 TPM= 145.76 Transcript Type= NA
chr17	42411408	42423256	42411408	42423256	-	transcript3362.chr17.nnic@CAVIN1	transcript3362.chr17.nnic	protein_coding	42422627,42411408	42423256,42412250	Gene ID= ENSG00000177469.12 TPM= 6.76 Transcript Type= NA
chr17	42458849	42518007	42458849	42518007	+	transcript3371.chr17.nnic@ATP6V0A1	transcript3371.chr17.nnic	protein_coding	42458849,42460848,42466429,42468010,42470090,42477639,42478463,42480667,42483038,42487155,42490487,42494334,42495034,42495626,42498924,42500707,42501197,42507520,42513861,42514289,42516772	42458963,42461011,42466507,42468107,42470218,42477742,42478589,42480749,42483131,42487367,42490637,42494473,42495188,42495716,42499042,42500923,42501304,42507627,42513978,42514460,42518007	Gene ID= ENSG00000033627.16 TPM= 4.18 Transcript Type= NA
chr17	42458844	42521485	42458844	42521485	+	ENST00000393829.6@ATP6V0A1	ENST00000393829.6	protein_coding	42458844,42460848,42466429,42468010,42470090,42477660,42478463,42480667,42483038,42487155,42490487,42494334,42495034,42495626,42498924,42500707,42501197,42507520,42513861,42514289,42521027	42458963,42461011,42466507,42468107,42470218,42477742,42478589,42480749,42483131,42487367,42490637,42494473,42495188,42495716,42499042,42500923,42501304,42507627,42513978,42514460,42521485	Gene ID= ENSG00000033627.16 TPM= 7.56 Transcript Type= protein_coding
chr17	42458858	42471439	42458858	42471439	+	ENST00000588629.1@ATP6V0A1	ENST00000588629.1	protein_coding	42458858,42460848,42466429,42468010,42470090	42458963,42461011,42466507,42468107,42471439	Gene ID= ENSG00000033627.16 TPM= 1.93 Transcript Type= retained_intron
chr17	42458880	42522582	42458880	42522582	+	ENST00000264649.10@ATP6V0A1	ENST00000264649.10	protein_coding	42458880,42460848,42466429,42468010,42470090,42477639,42478463,42480667,42483038,42487155,42490487,42494334,42495034,42495626,42498924,42500707,42501197,42507520,42513861,42514289,42521027	42458963,42461011,42466507,42468107,42470218,42477742,42478589,42480749,42483131,42487367,42490637,42494473,42495188,42495716,42499042,42500923,42501304,42507627,42513978,42514460,42522582	Gene ID= ENSG00000033627.16 TPM= 61.62 Transcript Type= protein_coding
chr17	42536172	42544449	42536172	42544449	+	ENST00000225927.6@NAGLU	ENST00000225927.6	protein_coding	42536172,42537398,42538339,42538670,42540950,42543028	42536655,42537545,42538485,42538755,42541206,42544449	Gene ID= ENSG00000108784.9 TPM= 27.03 Transcript Type= protein_coding
chr17	42536216	42544449	42536216	42544449	+	transcript3389.chr17.nic@NAGLU	transcript3389.chr17.nic	protein_coding	42536216,42538339,42538670,42540950,42543028	42536655,42538485,42538755,42541206,42544449	Gene ID= ENSG00000108784.9 TPM= 11.58 Transcript Type= NA
chr17	42536216	42544449	42536216	42544449	+	transcript3390.chr17.nnic@NAGLU	transcript3390.chr17.nnic	protein_coding	42536216,42538339,42538670,42541039,42543028	42536655,42538485,42538755,42541206,42544449	Gene ID= ENSG00000108784.9 TPM= 2.9 Transcript Type= NA
chr17	42536232	42544449	42536232	42544449	+	transcript3392.chr17.nic@NAGLU	transcript3392.chr17.nic	protein_coding	42536232,42537398,42538339,42538670,42543028	42536655,42537545,42538485,42538755,42544449	Gene ID= ENSG00000108784.9 TPM= 5.79 Transcript Type= NA
chr17	42552436	42554748	42552436	42554748	-	ENST00000590513.2@AC067852.2	ENST00000590513.2	antisense_RNA	42552436	42554748	Gene ID= ENSG00000266962.2 TPM= 19.31 Transcript Type= antisense_RNA
chr17	42554606	42555213	42554606	42555213	+	transcript3397.chr17.nnic@NA	transcript3397.chr17.nnic	NA	42554606	42555213	Gene ID= novel_gene_chr17_3398 TPM= 3.86 Transcript Type= NA
chr17	42562136	42566275	42562136	42566275	+	transcript3404.chr17.nic@COASY	transcript3404.chr17.nic	protein_coding	42562136,42562933,42563961,42564446,42564709,42564983,42565227,42565471,42565659,42565906	42562219,42563322,42564175,42564577,42564898,42565047,42565311,42565568,42565805,42566275	Gene ID= ENSG00000068120.14 TPM= 1.93 Transcript Type= NA
chr17	42562490	42566275	42562490	42566275	+	transcript3406.chr17.nnic@COASY	transcript3406.chr17.nnic	protein_coding	42562490,42563961,42564446,42564983,42565227,42565471,42565659,42565906	42563322,42564175,42564577,42565047,42565311,42565568,42565805,42566275	Gene ID= ENSG00000068120.14 TPM= 1.93 Transcript Type= NA
chr17	42562134	42566275	42562134	42566275	+	transcript3408.chr17.nnic@COASY	transcript3408.chr17.nnic	protein_coding	42562134,42562612,42563961,42564446,42565227,42565471,42565659,42565906	42562219,42563322,42564175,42564577,42565311,42565568,42565805,42566275	Gene ID= ENSG00000068120.14 TPM= 5.31 Transcript Type= NA
chr17	42562128	42566275	42562128	42566275	+	transcript3409.chr17.nnic@COASY	transcript3409.chr17.nnic	protein_coding	42562128,42563961,42564446,42565227,42565471,42565659,42565906	42563322,42564175,42564577,42565311,42565568,42565805,42566275	Gene ID= ENSG00000068120.14 TPM= 11.1 Transcript Type= NA
chr17	42562147	42566260	42562147	42566260	+	ENST00000421097.6@COASY	ENST00000421097.6	protein_coding	42562147,42562612,42563961,42564446,42564709,42564983,42565227,42565471,42565659,42565906	42562219,42563322,42564175,42564577,42564898,42565047,42565311,42565568,42565805,42566260	Gene ID= ENSG00000068120.14 TPM= 7.72 Transcript Type= protein_coding
chr17	42562167	42566275	42562167	42566275	+	ENST00000393818.2@COASY	ENST00000393818.2	protein_coding	42562167,42563961,42564446,42564709,42564983,42565227,42565471,42565659,42565906	42563322,42564175,42564577,42564898,42565047,42565311,42565568,42565805,42566275	Gene ID= ENSG00000068120.14 TPM= 20.27 Transcript Type= protein_coding
chr17	42567072	42573239	42567072	42573239	+	ENST00000246912.8@MLX	ENST00000246912.8	protein_coding	42567072,42567619,42568470,42568837,42569204,42569507,42569982,42571547	42567328,42567655,42568559,42568943,42569303,42569606,42570183,42573239	Gene ID= ENSG00000108788.11 TPM= 1.28 Transcript Type= protein_coding
chr17	42567088	42572705	42567088	42572705	+	transcript3449.chr17.nic@MLX	transcript3449.chr17.nic	protein_coding	42567088,42567619,42568837,42569204,42569507,42569982,42571547	42567328,42567655,42568943,42569303,42569606,42570183,42572705	Gene ID= ENSG00000108788.11 TPM= 5.31 Transcript Type= NA
chr17	42567068	42573239	42567068	42573239	+	ENST00000435881.6@MLX	ENST00000435881.6	protein_coding	42567068,42567619,42568470,42568837,42569204,42569507,42569982,42571547	42567166,42567655,42568559,42568943,42569303,42569606,42570183,42573239	Gene ID= ENSG00000108788.11 TPM= 6.11 Transcript Type= protein_coding
chr17	42567072	42573239	42567072	42573239	+	ENST00000346833.8@MLX	ENST00000346833.8	protein_coding	42567072,42567619,42568837,42569204,42569507,42569982,42571547	42567166,42567655,42568943,42569303,42569606,42570183,42573239	Gene ID= ENSG00000108788.11 TPM= 4.18 Transcript Type= protein_coding
chr17	42572315	42577795	42572315	42577795	-	ENST00000393795.7@PSMC3IP	ENST00000393795.7	protein_coding	42577653,42577461,42577213,42574099,42573478,42573311,42573107,42572315	42577795,42577561,42577302,42574210,42573623,42573364,42573166,42573024	Gene ID= ENSG00000131470.14 TPM= 1.93 Transcript Type= protein_coding
chr17	42577825	42578364	42577825	42578364	+	transcript3462.chr17.nnic@NA	transcript3462.chr17.nnic	NA	42577825	42578364	Gene ID= novel_gene_chr17_3463 TPM= 5.79 Transcript Type= NA
chr17	42579513	42609437	42579513	42609437	-	transcript3450.chr17.nnic@RETREG3	transcript3450.chr17.nnic	protein_coding	42609086,42592056,42586053,42585125,42583498,42582674,42579513	42609437,42592162,42586137,42585262,42583580,42582806,42582270	Gene ID= ENSG00000141699.10 TPM= 15.44 Transcript Type= NA
chr17	42579515	42609384	42579515	42609384	-	ENST00000309428.9@RETREG3	ENST00000309428.9	protein_coding	42609086,42592056,42587834,42586765,42586053,42585125,42583498,42582674,42579515	42609384,42592162,42587864,42586891,42586137,42585262,42583580,42582806,42582270	Gene ID= ENSG00000141699.10 TPM= 44.4 Transcript Type= protein_coding
chr17	42609676	42615234	42609676	42615234	+	ENST00000251413.7@TUBG1	ENST00000251413.7	protein_coding	42609676,42610108,42610423,42612075,42612427,42612947,42613647,42613849,42614260,42614496,42614844	42609786,42610220,42610590,42612143,42612506,42613073,42613733,42613998,42614412,42614657,42615234	Gene ID= ENSG00000131462.7 TPM= 174.72 Transcript Type= protein_coding
chr17	42659305	42667006	42659305	42667006	+	ENST00000251412.7@TUBG2	ENST00000251412.7	protein_coding	42659305,42659834,42660149,42660639,42662973,42663377,42665476,42665678,42666087,42666323,42666603	42659552,42659946,42660316,42660707,42663052,42663503,42665562,42665827,42666239,42666484,42667006	Gene ID= ENSG00000037042.8 TPM= 6.76 Transcript Type= protein_coding
chr17	42667917	42676985	42667917	42676985	-	transcript3421.chr17.nic@PLEKHH3	transcript3421.chr17.nic	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42671003,42670573,42669943,42669430,42667917	42676985,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 3.54 Transcript Type= NA
chr17	42667917	42677038	42667917	42677038	-	transcript3423.chr17.nnic@PLEKHH3	transcript3423.chr17.nnic	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42671003,42670573,42669430,42667917	42677038,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 2.58 Transcript Type= NA
chr17	42667944	42676994	42667944	42676994	-	ENST00000293349.10@PLEKHH3	ENST00000293349.10	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42671003,42670573,42669918,42669430,42667944	42676994,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 10.62 Transcript Type= protein_coding
chr17	42667914	42676951	42667914	42676951	-	ENST00000591022.5@PLEKHH3	ENST00000591022.5	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42670994,42670573,42669918,42669430,42667914	42676951,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 15.13 Transcript Type= protein_coding
chr17	42700275	42745030	42700275	42745030	-	ENST00000428826.6@EZH1	ENST00000428826.6	protein_coding	42745011,42730828,42728825,42727635,42724305,42722795,42720273,42719105,42718454,42717976,42713209,42712289,42709846,42708876,42707958,42706007,42705088,42704602,42703740,42702877,42700275	42745030,42730918,42728952,42727763,42724424,42722915,42720449,42719207,42718617,42718067,42713389,42712485,42709937,42708916,42708083,42706185,42705183,42704683,42703820,42702961,42702592	Gene ID= ENSG00000108799.12 TPM= 25.1 Transcript Type= protein_coding
chr17	42761194	42763036	42761194	42763036	+	ENST00000253796.9@RAMP2	ENST00000253796.9	protein_coding	42761194,42761834,42762355,42762597	42761358,42761899,42762463,42763036	Gene ID= ENSG00000131477.10 TPM= 10.62 Transcript Type= protein_coding
chr17	42773436	42779599	42773436	42779599	+	ENST00000253794.6@VPS25	ENST00000253794.6	protein_coding	42773436,42773733,42774646,42775381,42776245,42778957	42773528,42773878,42774699,42775469,42776320,42779599	Gene ID= ENSG00000131475.6 TPM= 70.47 Transcript Type= protein_coding
chr17	42797634	42798704	42797634	42798704	-	ENST00000328434.7@COA3	ENST00000328434.7	protein_coding	42798468,42797634	42798704,42798167	Gene ID= ENSG00000183978.7 TPM= 55.99 Transcript Type= protein_coding
chr17	42810137	42824263	42810137	42824263	-	ENST00000590099.5@BECN1	ENST00000590099.5	protein_coding	42824155,42823748,42820774,42819548,42818787,42818544,42818221,42815908,42814524,42813948,42811655,42810137	42824263,42823879,42820841,42819609,42818877,42818680,42818415,42816054,42814673,42814008,42811797,42810928	Gene ID= ENSG00000126581.12 TPM= 190.53 Transcript Type= protein_coding
chr17	42810134	42824263	42810134	42824263	-	ENST00000361523.8@BECN1	ENST00000361523.8	protein_coding	42824133,42823748,42820774,42819548,42818787,42818544,42818221,42815908,42814524,42813948,42811655,42810134	42824263,42823879,42820841,42819609,42818877,42818680,42818415,42816054,42814673,42814008,42811797,42810928	Gene ID= ENSG00000126581.12 TPM= 138.59 Transcript Type= protein_coding
chr17	42851184	42858124	42851184	42858124	+	ENST00000308423.6@AOC3	ENST00000308423.6	protein_coding	42851184,42854448,42855444,42856275	42852943,42854733,42855573,42858124	Gene ID= ENSG00000131471.6 TPM= 9.65 Transcript Type= protein_coding
chr17	42950526	42964474	42950526	42964474	-	transcript3522.chr17.nic@AARSD1	transcript3522.chr17.nic	protein_coding	42964443,42964106,42961192,42957138,42956404,42956204,42955842,42955158,42954876,42953724,42951800,42950526	42964474,42964237,42961351,42957195,42956560,42956320,42955972,42955224,42954967,42953778,42951894,42950728	Gene ID= ENSG00000266967.6 TPM= 4.83 Transcript Type= NA
chr17	42950526	42964475	42950526	42964475	-	transcript3525.chr17.nic@AARSD1	transcript3525.chr17.nic	protein_coding	42964402,42964106,42961192,42957138,42956404,42956204,42955842,42955158,42954876,42951800,42950526	42964475,42964237,42961351,42957195,42956560,42956320,42955972,42955224,42954967,42951894,42950728	Gene ID= ENSG00000266967.6 TPM= 4.83 Transcript Type= NA
chr17	42950546	42964476	42950546	42964476	-	ENST00000427569.6@AARSD1	ENST00000427569.6	protein_coding	42964402,42964106,42961192,42957138,42956404,42956204,42955842,42955158,42954876,42953724,42951800,42950546	42964476,42964237,42961351,42957195,42956560,42956320,42955972,42955224,42954967,42953778,42951894,42950728	Gene ID= ENSG00000266967.6 TPM= 29.92 Transcript Type= protein_coding
chr17	42968084	42980097	42968084	42980097	-	transcript3527.chr17.nnic@PTGES3L	transcript3527.chr17.nnic	protein_coding	42980046,42979550,42979378,42979170,42971607,42970289,42968084	42980097,42979663,42979444,42979268,42971696,42970342,42969226	Gene ID= ENSG00000267060.5 TPM= 3.86 Transcript Type= NA
chr17	42968104	42980433	42968104	42980433	-	ENST00000409446.7@PTGES3L	ENST00000409446.7	protein_coding	42980046,42979378,42979170,42971607,42970289,42968104	42980433,42979444,42979268,42971696,42970342,42969186	Gene ID= ENSG00000267060.5 TPM= 1.93 Transcript Type= protein_coding
chr17	42980565	42993690	42980565	42993690	+	ENST00000361677.5@RUNDC1	ENST00000361677.5	protein_coding	42980565,42987256,42989341,42990317,42990851	42981074,42987414,42989539,42990436,42993690	Gene ID= ENSG00000198863.7 TPM= 6.76 Transcript Type= protein_coding
chr17	42998434	43002959	42998434	43002959	+	ENST00000253788.9@RPL27	ENST00000253788.9	protein_coding	42998434,42998749,42999933,43002673,43002872	42998471,42998831,43000102,43002783,43002959	Gene ID= ENSG00000131469.12 TPM= 437.29 Transcript Type= protein_coding
chr17	42998436	43002959	42998436	43002959	+	ENST00000588830.1@RPL27	ENST00000588830.1	protein_coding	42998436,42998749,43002673,43002872	42998471,42998831,43002783,43002959	Gene ID= ENSG00000131469.12 TPM= 52.13 Transcript Type= nonsense_mediated_decay
chr17	42998477	43002932	42998477	43002932	+	ENST00000589913.5@RPL27	ENST00000589913.5	protein_coding	42998477,42999933,43002673,43002872	42998831,43000102,43002783,43002932	Gene ID= ENSG00000131469.12 TPM= 6.76 Transcript Type= protein_coding
chr17	43006725	43014456	43006725	43014456	+	ENST00000415816.6@IFI35	ENST00000415816.6	protein_coding	43006725,43012179,43013047,43013267,43013476,43013776,43014108	43006968,43012277,43013194,43013373,43013662,43013882,43014456	Gene ID= ENSG00000068079.7 TPM= 2.41 Transcript Type= protein_coding
chr17	43006740	43014456	43006740	43014456	+	ENST00000438323.2@IFI35	ENST00000438323.2	protein_coding	43006740,43012179,43013047,43013267,43013476,43013776,43014108	43006968,43012277,43013194,43013379,43013662,43013882,43014456	Gene ID= ENSG00000068079.7 TPM= 2.41 Transcript Type= protein_coding
chr17	43014605	43022418	43014605	43022418	-	ENST00000355653.7@VAT1	ENST00000355653.7	protein_coding	43021936,43018592,43018036,43017841,43016307,43014605	43022418,43018799,43018206,43017930,43016548,43016144	Gene ID= ENSG00000108828.15 TPM= 32.82 Transcript Type= protein_coding
chr17	43170300	43211689	43170300	43211689	+	transcript3553.chr17.nic@NBR1	transcript3553.chr17.nic	protein_coding	43170300,43175791,43177936,43179394,43180795,43186250,43189042,43189588,43190609,43191372,43193094,43193348,43194350,43194964,43196481,43196942,43200167,43201686,43202655,43203681,43209901	43170943,43175901,43177998,43179412,43180817,43186444,43189119,43189802,43190776,43191581,43193253,43193638,43194499,43195039,43196591,43197106,43200608,43201780,43202712,43203786,43211689	Gene ID= ENSG00000188554.13 TPM= 25.42 Transcript Type= NA
chr17	43171165	43211689	43171165	43211689	+	transcript3567.chr17.nnic@NBR1	transcript3567.chr17.nnic	protein_coding	43171165,43175791,43177936,43179394,43180795,43186250,43189042,43189588,43190609,43193094,43193348,43194350,43194964,43196481,43196942,43200167,43201686,43202655,43203681,43209901	43171302,43175901,43177998,43179412,43180817,43186444,43189119,43189802,43190776,43193253,43193638,43194499,43195039,43196591,43197106,43200608,43201780,43202712,43203786,43211689	Gene ID= ENSG00000188554.13 TPM= 16 Transcript Type= NA
chr17	43398959	43401137	43398959	43401137	+	ENST00000320033.4@ARL4D	ENST00000320033.4	protein_coding	43398959,43399661	43399093,43401137	Gene ID= ENSG00000175906.4 TPM= 1.93 Transcript Type= protein_coding
chr17	43483955	43544463	43483955	43544463	+	transcript3588.chr17.nic@DHX8	transcript3588.chr17.nic	protein_coding	43483955,43489449,43490391,43491165,43492183,43492681,43493445,43493683,43496181,43498862,43499956,43504644,43507003,43507503,43507809,43508339,43513362,43517167,43520130,43520751,43521369,43522047,43536412,43544162	43484185,43489534,43490463,43491250,43492292,43493040,43493589,43493886,43496268,43498959,43500103,43504825,43507197,43507688,43508019,43508520,43513502,43517322,43520267,43520879,43521565,43522226,43536498,43544463	Gene ID= ENSG00000067596.10 TPM= 3.38 Transcript Type= NA
chr17	43483963	43526786	43483963	43526786	+	ENST00000540306.5@DHX8	ENST00000540306.5	protein_coding	43483963,43489449,43490391,43491165,43492183,43492681,43493445,43493683,43496181,43498862,43499956,43504644,43507003,43507503,43507809,43508339,43513362,43517167,43520130,43520751,43521369,43522047,43526496	43484185,43489534,43490463,43491250,43492292,43493040,43493589,43493886,43496268,43498959,43500103,43504825,43507197,43507688,43508019,43508520,43513502,43517322,43520267,43520879,43521565,43522226,43526786	Gene ID= ENSG00000067596.10 TPM= 4.34 Transcript Type= protein_coding
chr17	43526141	43526788	43526141	43526788	+	transcript3593.chr17.nnic@NA	transcript3593.chr17.nnic	NA	43526141	43526788	Gene ID= novel_gene_chr17_3594 TPM= 1.93 Transcript Type= NA
chr17	43763588	43766246	43763588	43766246	-	transcript3616.chr17.nnic@NA	transcript3616.chr17.nnic	NA	43763588	43766246	Gene ID= novel_gene_chr17_3617 TPM= 3.86 Transcript Type= NA
chr17	43766131	43779017	43766131	43779017	-	transcript3599.chr17.nic@DUSP3	transcript3599.chr17.nic	protein_coding	43778800,43774712,43769582,43766131	43779017,43774938,43769814,43766784	Gene ID= ENSG00000108861.8 TPM= 80.6 Transcript Type= NA
chr17	43766121	43778988	43766121	43778988	-	ENST00000226004.7@DUSP3	ENST00000226004.7	protein_coding	43778800,43774712,43766121	43778988,43774938,43769814	Gene ID= ENSG00000108861.8 TPM= 151.55 Transcript Type= protein_coding
chr17	43847176	43863629	43847176	43863629	+	ENST00000317310.4@CD300LG	ENST00000317310.4	protein_coding	43847176,43848558,43852912,43853807,43855207,43857104,43861798	43847259,43848893,43853013,43854044,43855319,43857156,43863629	Gene ID= ENSG00000161649.12 TPM= 1.93 Transcript Type= protein_coding
chr17	44011188	44023151	44011188	44023151	-	ENST00000589334.5@TMEM101	ENST00000589334.5	protein_coding	44023039,44014816,44014357,44013009,44011188	44023151,44015155,44014537,44013155,44012236	Gene ID= ENSG00000091947.9 TPM= 36.68 Transcript Type= protein_coding
chr17	44034635	44067619	44034635	44067619	-	ENST00000591247.5@LSM12	ENST00000591247.5	protein_coding	44067443,44066464,44063801,44040147,44037412,44034635	44067619,44066733,44063934,44040256,44037538,44036300	Gene ID= ENSG00000161654.9 TPM= 69.5 Transcript Type= protein_coding
chr17	44070818	44076344	44070818	44076344	+	transcript3668.chr17.nic@G6PC3	transcript3668.chr17.nic	protein_coding	44070818,44074160,44074680,44075310,44075680	44071183,44074266,44074770,44075451,44076344	Gene ID= ENSG00000141349.8 TPM= 9.65 Transcript Type= NA
chr17	44070735	44076304	44070735	44076304	+	ENST00000269097.8@G6PC3	ENST00000269097.8	protein_coding	44070735,44074160,44074680,44074969,44075310,44075680	44071183,44074266,44074770,44075087,44075451,44076304	Gene ID= ENSG00000141349.8 TPM= 17.38 Transcript Type= protein_coding
chr17	44070751	44076300	44070751	44076300	+	ENST00000585361.5@G6PC3	ENST00000585361.5	protein_coding	44070751,44074160,44074680,44074969,44075310,44075680	44071242,44074266,44074770,44075087,44075451,44076300	Gene ID= ENSG00000141349.8 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr17	44078294	44123663	44078294	44123663	-	transcript3638.chr17.nic@HDAC5	transcript3638.chr17.nic	protein_coding	44123504,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44078294	44123663,44117704,44110800,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 16.09 Transcript Type= NA
chr17	44078294	44111265	44078294	44111265	-	transcript3653.chr17.nic@HDAC5	transcript3653.chr17.nic	protein_coding	44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44078294	44111265,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 49.39 Transcript Type= NA
chr17	44076746	44123638	44076746	44123638	-	ENST00000225983.10@HDAC5	ENST00000225983.10	protein_coding	44123504,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44076746	44123638,44117704,44110803,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 8.69 Transcript Type= protein_coding
chr17	44123839	44124421	44123839	44124421	+	transcript3672.chr17.nnic@NA	transcript3672.chr17.nnic	NA	44123839	44124421	Gene ID= novel_gene_chr17_3673 TPM= 1.93 Transcript Type= NA
chr17	44170706	44179083	44170706	44179083	+	ENST00000293414.5@ASB16	ENST00000293414.5	protein_coding	44170706,44172046,44176738,44177609,44178205	44171090,44172313,44177230,44177722,44179083	Gene ID= ENSG00000161664.6 TPM= 3.86 Transcript Type= protein_coding
chr17	44176602	44178515	44176602	44178515	+	transcript3736.chr17.nnic@NA	transcript3736.chr17.nnic	NA	44176602	44178515	Gene ID= novel_gene_chr17_3737 TPM= 2.9 Transcript Type= NA
chr17	44186958	44191725	44186958	44191725	+	transcript3716.chr17.nic@TMUB2	transcript3716.chr17.nic	protein_coding	44186958,44187676,44187907,44188935,44190501	44187109,44187743,44188009,44189588,44191725	Gene ID= ENSG00000168591.15 TPM= 7.05 Transcript Type= NA
chr17	44187221	44191731	44187221	44191731	+	transcript3726.chr17.nic@TMUB2	transcript3726.chr17.nic	protein_coding	44187221,44188935,44190501	44187743,44189299,44191731	Gene ID= ENSG00000168591.15 TPM= 2.7 Transcript Type= NA
chr17	44186986	44191730	44186986	44191730	+	ENST00000357984.7@TMUB2	ENST00000357984.7	protein_coding	44186986,44189022,44190501	44187109,44189588,44191730	Gene ID= ENSG00000168591.15 TPM= 3.67 Transcript Type= protein_coding
chr17	44187216	44191725	44187216	44191725	+	transcript3729.chr17.nic@TMUB2	transcript3729.chr17.nic	protein_coding	44187216,44189022,44190501	44187743,44189588,44191725	Gene ID= ENSG00000168591.15 TPM= 5.12 Transcript Type= NA
chr17	44187206	44191726	44187206	44191726	+	ENST00000319511.6@TMUB2	ENST00000319511.6	protein_coding	44187206,44188935,44190501	44187743,44189588,44191726	Gene ID= ENSG00000168591.15 TPM= 7.53 Transcript Type= protein_coding
chr17	44191805	44199917	44191805	44199917	-	transcript3701.chr17.nic@ATXN7L3	transcript3701.chr17.nic	protein_coding	44199496,44198020,44197598,44197228,44196929,44196396,44196034,44195800,44195419,44195097,44194768,44194517,44191805	44199917,44198130,44197730,44197399,44197026,44196418,44196100,44195828,44195487,44195140,44194839,44194674,44194411	Gene ID= ENSG00000087152.15 TPM= 13.03 Transcript Type= NA
chr17	44191805	44198379	44191805	44198379	-	ENST00000389384.8@ATXN7L3	ENST00000389384.8	protein_coding	44198020,44197598,44197228,44196929,44196396,44196034,44195800,44195419,44195097,44194768,44194517,44191805	44198379,44197730,44197399,44197026,44196418,44196079,44195828,44195487,44195140,44194839,44194674,44194411	Gene ID= ENSG00000087152.15 TPM= 13.03 Transcript Type= protein_coding
chr17	44206594	44219172	44206594	44219172	-	transcript3676.chr17.nnic@UBTF	transcript3676.chr17.nnic	protein_coding	44218965,44218172,44216529,44215906,44215654,44213218,44212819,44212344,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44219172,44218296,44216704,44215989,44215809,44213282,44212939,44212454,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 11.52 Transcript Type= NA
chr17	44206594	44220954	44206594	44220954	-	transcript3679.chr17.nic@UBTF	transcript3679.chr17.nic	protein_coding	44220740,44218172,44216529,44215906,44215654,44213218,44212819,44212344,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44220954,44218296,44216704,44215989,44215809,44213282,44212939,44212454,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 5.72 Transcript Type= NA
chr17	44205033	44221626	44205033	44221626	-	ENST00000302904.8@UBTF	ENST00000302904.8	protein_coding	44221201,44218172,44216529,44215906,44215654,44213218,44212819,44212344,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44205033	44221626,44218296,44216704,44215989,44215809,44213282,44212939,44212454,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 2.25 Transcript Type= protein_coding
chr17	44206594	44219172	44206594	44219172	-	transcript3683.chr17.nnic@UBTF	transcript3683.chr17.nnic	protein_coding	44218965,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44219172,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 11.2 Transcript Type= NA
chr17	44205033	44220963	44205033	44220963	-	ENST00000343638.9@UBTF	ENST00000343638.9	protein_coding	44220740,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44205033	44220963,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 8.69 Transcript Type= protein_coding
chr17	44206594	44220854	44206594	44220854	-	ENST00000527034.5@UBTF	ENST00000527034.5	protein_coding	44220740,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207703,44207454,44206594	44220854,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 5.41 Transcript Type= protein_coding
chr17	44220095	44220548	44220095	44220548	+	transcript3738.chr17.nnic@NA	transcript3738.chr17.nnic	NA	44220095	44220548	Gene ID= novel_gene_chr17_3739 TPM= 1.93 Transcript Type= NA
chr17	44319625	44324870	44319625	44324870	-	ENST00000225308.12@SLC25A39	ENST00000225308.12	protein_coding	44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319625	44324870,44323577,44323343,44322852,44322528,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 85.55 Transcript Type= protein_coding
chr17	44319627	44324829	44319627	44324829	-	transcript3744.chr17.nic@SLC25A39	transcript3744.chr17.nic	protein_coding	44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319627	44324829,44323577,44323343,44322852,44322528,44321767,44321558,44321231,44320749,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 6.16 Transcript Type= NA
chr17	44319627	44324839	44319627	44324839	-	transcript3745.chr17.nic@SLC25A39	transcript3745.chr17.nic	protein_coding	44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319627	44324839,44323343,44322852,44322528,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 12.66 Transcript Type= NA
chr17	44319627	44324859	44319627	44324859	-	transcript3753.chr17.nnic@SLC25A39	transcript3753.chr17.nnic	protein_coding	44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320355,44320196,44319627	44324859,44323577,44323343,44322852,44322528,44321767,44321558,44321231,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 4.23 Transcript Type= NA
chr17	44319627	44324839	44319627	44324839	-	transcript3762.chr17.nic@SLC25A39	transcript3762.chr17.nic	protein_coding	44323478,44323284,44322808,44322419,44321700,44320355,44320196,44319627	44324839,44323343,44322852,44322528,44321767,44321558,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 5.19 Transcript Type= NA
chr17	44319636	44324815	44319636	44324815	-	ENST00000377095.9@SLC25A39	ENST00000377095.9	protein_coding	44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319636	44324815,44323577,44323343,44322852,44322552,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 6.76 Transcript Type= protein_coding
chr17	44345086	44353102	44345086	44353102	+	ENST00000053867.7@GRN	ENST00000053867.7	protein_coding	44345086,44349158,44349426,44349667,44350228,44350442,44350691,44351037,44351363,44351550,44352015,44352341,44352661	44345334,44349302,44349551,44349751,44350340,44350577,44350800,44351163,44351460,44351795,44352248,44352571,44353102	Gene ID= ENSG00000030582.17 TPM= 131.28 Transcript Type= protein_coding
chr17	44345273	44347124	44345273	44347124	+	transcript3771.chr17.nnic@NA	transcript3771.chr17.nnic	NA	44345273	44347124	Gene ID= novel_gene_chr17_3772 TPM= 1.93 Transcript Type= NA
chr17	44400041	44503401	44400041	44503401	-	transcript3774.chr17.nic@GPATCH8	transcript3774.chr17.nic	protein_coding	44503326,44474829,44473725,44467097,44464472,44436478,44435065,44424349,44407217,44405921,44400041	44503401,44474903,44473759,44467202,44464544,44436545,44435151,44424492,44407266,44406051,44401453	Gene ID= ENSG00000186566.12 TPM= 2.9 Transcript Type= NA
chr17	44400041	44503628	44400041	44503628	-	transcript3776.chr17.nnic@GPATCH8	transcript3776.chr17.nnic	protein_coding	44503326,44474829,44473725,44467097,44464472,44436478,44435065,44424349,44405921,44400041	44503628,44474903,44473759,44467114,44464544,44436545,44435151,44424492,44406051,44401453	Gene ID= ENSG00000186566.12 TPM= 2.9 Transcript Type= NA
chr17	44677458	44689762	44677458	44689762	-	ENST00000315286.12@CCDC43	ENST00000315286.12	protein_coding	44689550,44683872,44682003,44680585,44677458	44689762,44683959,44682138,44680643,44679043	Gene ID= ENSG00000180329.13 TPM= 69.5 Transcript Type= protein_coding
chr17	44677440	44689779	44677440	44689779	-	ENST00000457422.6@CCDC43	ENST00000457422.6	protein_coding	44689550,44683872,44682003,44677440	44689779,44683959,44682138,44679043	Gene ID= ENSG00000180329.13 TPM= 20.27 Transcript Type= protein_coding
chr17	44847902	44850480	44847902	44850480	+	ENST00000253410.2@HIGD1B	ENST00000253410.2	protein_coding	44847902,44849254,44850332	44848252,44849388,44850480	Gene ID= ENSG00000131097.6 TPM= 2.9 Transcript Type= protein_coding
chr17	44849943	44899662	44849943	44899662	-	ENST00000426333.6@EFTUD2	ENST00000426333.6	protein_coding	44899369,44894417,44886585,44885256,44883649,44883093,44881687,44880554,44879556,44875934,44872446,44868287,44867807,44864930,44863655,44862713,44860432,44859905,44859080,44857075,44854918,44854556,44854269,44853517,44853296,44852409,44851710,44849943	44899662,44894525,44886750,44885334,44883724,44883158,44881722,44880644,44879638,44876100,44872570,44868350,44867897,44865065,44863782,44862906,44860543,44860045,44859181,44857157,44855004,44854682,44854356,44853635,44853390,44852562,44851817,44851369	Gene ID= ENSG00000108883.12 TPM= 18.82 Transcript Type= protein_coding
chr17	44850866	44899431	44850866	44899431	-	ENST00000592576.5@EFTUD2	ENST00000592576.5	protein_coding	44899369,44894417,44886585,44885256,44883649,44883093,44881687,44880554,44879556,44875934,44872446,44868287,44867807,44864930,44863655,44862713,44860432,44859905,44859080,44857075,44854918,44854556,44854269,44853517,44853296,44852409,44851710,44850866	44899431,44894525,44886750,44885334,44883724,44883128,44881722,44880644,44879638,44876100,44872570,44868350,44867897,44865065,44863782,44862906,44860543,44860045,44859181,44857157,44855004,44854682,44854356,44853635,44853390,44852562,44851817,44851369	Gene ID= ENSG00000108883.12 TPM= 147.21 Transcript Type= protein_coding
chr17	45023346	45051517	45023346	45051517	-	ENST00000614054.4@DCAKD	ENST00000614054.4	protein_coding	45051361,45034774,45034187,45030092,45023346	45051517,45034999,45034390,45030179,45024724	Gene ID= ENSG00000172992.11 TPM= 7.72 Transcript Type= protein_coding
chr17	45023344	45061018	45023344	45061018	-	ENST00000342350.9@DCAKD	ENST00000342350.9	protein_coding	45060888,45034774,45034187,45030092,45023344	45061018,45034999,45034390,45030179,45024724	Gene ID= ENSG00000172992.11 TPM= 4.83 Transcript Type= protein_coding
chr17	45051610	45109016	45051610	45109016	+	ENST00000592782.5@NMT1	ENST00000592782.5	protein_coding	45051610,45061283,45081644,45086508,45093685,45096194,45097128,45098382,45099405,45102951,45103709,45104859,45105619	45051693,45061460,45081752,45086652,45093803,45096285,45097244,45098552,45099513,45103121,45103876,45104996,45109016	Gene ID= ENSG00000136448.11 TPM= 191.13 Transcript Type= protein_coding
chr17	45094816	45098535	45094816	45098535	-	transcript3823.chr17.nnic@NA	transcript3823.chr17.nnic	NA	45094816	45098535	Gene ID= novel_gene_chr17_3824 TPM= 2.9 Transcript Type= NA
chr17	45135708	45144176	45135708	45144176	+	ENST00000321854.12@ACBD4	ENST00000321854.12	protein_coding	45135708,45136108,45136500,45136692,45137019,45137368,45137760,45137913,45139021,45143443	45135953,45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45144176	Gene ID= ENSG00000181513.14 TPM= 4.83 Transcript Type= protein_coding
chr17	45148502	45152101	45148502	45152101	+	ENST00000332499.3@HEXIM1	ENST00000332499.3	protein_coding	45148502	45152101	Gene ID= ENSG00000186834.3 TPM= 82.05 Transcript Type= protein_coding
chr17	45160204	45161537	45160204	45161537	-	transcript3856.chr17.nnic@NA	transcript3856.chr17.nnic	NA	45160204	45161537	Gene ID= novel_gene_chr17_3857 TPM= 3.86 Transcript Type= NA
chr17	45160700	45170040	45160700	45170040	+	ENST00000307275.7@HEXIM2	ENST00000307275.7	protein_coding	45160700,45162488,45162750,45169015	45160943,45162635,45162859,45170040	Gene ID= ENSG00000168517.10 TPM= 14.48 Transcript Type= protein_coding
chr17	45242005	45247318	45242005	45247318	+	transcript3860.chr17.nic@FMNL1	transcript3860.chr17.nic	protein_coding	45242005,45242341,45243118,45243791,45244176,45244819,45244979,45245253,45245632,45245878,45246210,45246867	45242146,45242465,45243320,45244025,45244244,45244899,45245108,45245416,45245733,45245973,45246330,45247318	Gene ID= ENSG00000184922.13 TPM= 2.9 Transcript Type= NA
chr17	45263128	45317112	45263128	45317112	-	transcript3867.chr17.nnic@MAP3K14	transcript3867.chr17.nnic	protein_coding	45316960,45290490,45289236,45287154,45284812,45274464,45274123,45273503,45271058,45270413,45267406,45267092,45266537,45265163,45263128	45317112,45290765,45289305,45287364,45284949,45274593,45274254,45273607,45271221,45270563,45267759,45267198,45266681,45265263,45264800	Gene ID= ENSG00000006062.14 TPM= 18.97 Transcript Type= NA
chr17	45263128	45284885	45263128	45284885	-	transcript3870.chr17.nnic@MAP3K14	transcript3870.chr17.nnic	protein_coding	45283114,45274464,45274123,45273503,45271058,45270413,45267406,45267092,45266537,45265163,45263128	45284885,45274593,45274254,45273607,45271221,45270563,45267759,45267198,45266681,45265263,45264800	Gene ID= ENSG00000006062.14 TPM= 11.25 Transcript Type= NA
chr17	45263121	45317040	45263121	45317040	-	ENST00000344686.6@MAP3K14	ENST00000344686.6	protein_coding	45316960,45290490,45289236,45287154,45286431,45284812,45274464,45274123,45273503,45271058,45270413,45267406,45267092,45266537,45265163,45263121	45317040,45290765,45289305,45287364,45287045,45284949,45274593,45274254,45273607,45271221,45270563,45267759,45267198,45266681,45265263,45264800	Gene ID= ENSG00000006062.14 TPM= 49.78 Transcript Type= protein_coding
chr17	45465242	45490771	45465242	45490771	-	transcript3878.chr17.nic@PLEKHM1	transcript3878.chr17.nic	protein_coding	45490652,45482437,45477900,45475100,45465242	45490771,45482525,45478147,45475726,45468593	Gene ID= ENSG00000225190.10 TPM= 14.48 Transcript Type= NA
chr17	45435900	45490744	45435900	45490744	-	ENST00000430334.7@PLEKHM1	ENST00000430334.7	protein_coding	45490652,45482437,45477900,45475100,45468209,45458169,45453355,45450618,45445470,45440163,45439477,45435900	45490744,45482525,45478147,45475726,45468593,45458439,45454272,45450763,45445663,45440226,45439634,45437969	Gene ID= ENSG00000225190.10 TPM= 27.99 Transcript Type= protein_coding
chr17	45894544	46024431	45894544	46024431	+	transcript3885.chr17.nnic@MAPT	transcript3885.chr17.nnic	protein_coding	45894544,45962321,45971859,45974385,45978375,45982866,45987040,45991460,45996399,46010310,46014243,46018618,46023956	45894686,45962470,45971945,45974471,45978440,45983930,45987095,45991586,45996664,46010402,46014324,46018730,46024431	Gene ID= ENSG00000186868.15 TPM= 7.24 Transcript Type= NA
chr17	45894427	46024431	45894427	46024431	+	transcript3888.chr17.nnic@MAPT	transcript3888.chr17.nnic	protein_coding	45894427,45962321,45971859,45978375,45982866,45987040,45991460,45996399,46010310,46014243,46018618,46023956	45894686,45962470,45971945,45978440,45983930,45987095,45991586,45996664,46010402,46014324,46018730,46024431	Gene ID= ENSG00000186868.15 TPM= 20.75 Transcript Type= NA
chr17	45894539	46024431	45894539	46024431	+	transcript3890.chr17.nnic@MAPT	transcript3890.chr17.nnic	protein_coding	45894539,45962321,45971859,45978375,45982866,45987040,45991460,45996399,46014243,46018618,46023956	45894686,45962470,45971945,45978440,45983930,45987095,45991586,45996664,46014324,46018730,46024431	Gene ID= ENSG00000186868.15 TPM= 12.23 Transcript Type= NA
chr17	45894382	46028334	45894382	46028334	+	ENST00000340799.9@MAPT	ENST00000340799.9	protein_coding	45894382,45962321,45971859,45978375,45987040,45991460,45996399,46010310,46014243,46018618,46023956	45894686,45962470,45971945,45978440,45987095,45991586,45996664,46010402,46014324,46018730,46028334	Gene ID= ENSG00000186868.15 TPM= 50.2 Transcript Type= protein_coding
chr17	45894539	46024431	45894539	46024431	+	transcript3894.chr17.nnic@MAPT	transcript3894.chr17.nnic	protein_coding	45894539,45962321,45971859,45987040,45991460,45996399,46010310,46014243,46018618,46023956	45894686,45962470,45971945,45987095,45991586,45996664,46010402,46014324,46018730,46024431	Gene ID= ENSG00000186868.15 TPM= 9.01 Transcript Type= NA
chr17	45894524	45979015	45894524	45979015	+	transcript3899.chr17.nic@MAPT	transcript3899.chr17.nic	protein_coding	45894524,45962321,45971859,45978375	45894686,45962470,45971945,45979015	Gene ID= ENSG00000186868.15 TPM= 2.9 Transcript Type= NA
chr17	46193576	46196721	46193576	46196721	+	ENST00000398275.4@KANSL1-AS1	ENST00000398275.4	antisense_RNA	46193576,46196368	46193738,46196721	Gene ID= ENSG00000214401.4 TPM= 8.69 Transcript Type= antisense_RNA
chr17	46266929	46269808	46266929	46269808	+	transcript3928.chr17.nnic@NA	transcript3928.chr17.nnic	NA	46266929	46269808	Gene ID= novel_gene_chr17_3929 TPM= 1.93 Transcript Type= NA
chr17	46267037	46267519	46267037	46267519	+	ENST00000570002.2@AC005829.1	ENST00000570002.2	transcribed_unprocessed_pseudogene	46267037	46267519	Gene ID= ENSG00000261575.2 TPM= 2.9 Transcript Type= processed_transcript
chr17	46504367	46579713	46504367	46579713	-	transcript3922.chr17.nnic@ARL17A	transcript3922.chr17.nnic	protein_coding	46579601,46576175,46570759,46517094,46504367	46579713,46576339,46570869,46517233,46504609	Gene ID= ENSG00000185829.17 TPM= 2.9 Transcript Type= NA
chr17	46590676	46757464	46590676	46757464	+	transcript3931.chr17.nic@NSF	transcript3931.chr17.nic	protein_coding	46590676,46624244,46626613,46630411,46637376,46640054,46640643,46643104,46674414,46692903,46693847,46694475,46704759,46710963,46713853,46726549,46728855,46749773,46751503,46755314,46755499,46755802	46590787,46624329,46626712,46630450,46637542,46640161,46640718,46643259,46674613,46693068,46693921,46694662,46704854,46711119,46713986,46726615,46728934,46749907,46751616,46755369,46755597,46757464	Gene ID= ENSG00000073969.18 TPM= 9.49 Transcript Type= NA
chr17	46590669	46757464	46590669	46757464	+	ENST00000398238.8@NSF	ENST00000398238.8	protein_coding	46590669,46624244,46626613,46630411,46637376,46640054,46640643,46643104,46674414,46692903,46693847,46694475,46704759,46710963,46713853,46726549,46728855,46749773,46751503,46755314,46755802	46590787,46624329,46626712,46630450,46637542,46640161,46640718,46643259,46674613,46693068,46693921,46694662,46704854,46711119,46713986,46726615,46728934,46749907,46751616,46755369,46757464	Gene ID= ENSG00000073969.18 TPM= 105.05 Transcript Type= protein_coding
chr17	46590734	46714300	46590734	46714300	+	transcript3937.chr17.nic@NSF	transcript3937.chr17.nic	protein_coding	46590734,46624244,46626613,46630411,46637376,46640054,46640643,46643104,46674414,46692903,46693847,46694475,46704759,46710963,46713853	46590787,46624329,46626712,46630450,46637542,46640161,46640718,46643259,46674613,46693068,46693921,46694662,46704854,46711119,46714300	Gene ID= ENSG00000073969.18 TPM= 4.18 Transcript Type= NA
chr17	46923128	46942020	46923128	46942020	+	ENST00000640051.1@GOSR2	ENST00000640051.1	protein_coding	46923128,46929520,46931099,46932067,46935029,46938599	46923221,46929584,46931207,46932199,46935169,46942020	Gene ID= ENSG00000108433.16 TPM= 5.02 Transcript Type= protein_coding
chr17	46923146	46941600	46923146	46941600	+	ENST00000638216.1@GOSR2	ENST00000638216.1	protein_coding	46923146,46929520,46931099,46932067,46935029,46938599	46923269,46929584,46931207,46932199,46935169,46941600	Gene ID= ENSG00000108433.16 TPM= 1.16 Transcript Type= protein_coding
chr17	46923128	46936801	46923128	46936801	+	ENST00000415811.7@GOSR2	ENST00000415811.7	protein_coding	46923128,46929520,46931102,46932067,46935029	46923221,46929584,46931207,46932199,46936801	Gene ID= ENSG00000108433.16 TPM= 2.9 Transcript Type= protein_coding
chr17	46923075	46942015	46923075	46942015	+	ENST00000640608.1@GOSR2	ENST00000640608.1	protein_coding	46923075,46929520,46931099,46932067,46938599	46923221,46929584,46931207,46932199,46942015	Gene ID= ENSG00000108433.16 TPM= 6.76 Transcript Type= protein_coding
chr17	46923164	46940779	46923164	46940779	+	ENST00000638374.1@GOSR2	ENST00000638374.1	protein_coding	46923164,46929524,46931099,46932067,46935029,46938599	46923221,46929584,46931207,46932199,46935169,46940779	Gene ID= ENSG00000108433.16 TPM= 1.16 Transcript Type= protein_coding
chr17	46923139	46941336	46923139	46941336	+	ENST00000638838.1@GOSR2	ENST00000638838.1	protein_coding	46923139,46929520,46931102,46932067,46935029,46938599	46923221,46929584,46931207,46932199,46935169,46941336	Gene ID= ENSG00000108433.16 TPM= 5.98 Transcript Type= protein_coding
chr17	46923128	46939953	46923128	46939953	+	ENST00000576910.7@GOSR2	ENST00000576910.7	protein_coding	46923128,46929520,46931105,46932067,46935029,46938599	46923221,46929584,46931207,46932199,46935169,46939953	Gene ID= ENSG00000108433.16 TPM= 1.16 Transcript Type= protein_coding
chr17	46923153	46933267	46923153	46933267	+	ENST00000575949.6@GOSR2	ENST00000575949.6	protein_coding	46923153,46929520,46931099,46932067	46923221,46929584,46931207,46933267	Gene ID= ENSG00000108433.16 TPM= 1.93 Transcript Type= protein_coding
chr17	46941742	46943665	46941742	46943665	-	transcript3962.chr17.nnic@NA	transcript3962.chr17.nnic	NA	46941742	46943665	Gene ID= novel_gene_chr17_3963 TPM= 1.93 Transcript Type= NA
chr17	47143883	47189302	47143883	47189302	-	transcript3975.chr17.nic@CDC27	transcript3975.chr17.nic	protein_coding	47189146,47181562,47171917,47169917,47158206,47157230,47156913,47154672,47151806,47143883	47189302,47181637,47172064,47170042,47158303,47157384,47157124,47154786,47151918,47143982	Gene ID= ENSG00000004897.11 TPM= 2.9 Transcript Type= NA
chr17	47531064	47623276	47531064	47623276	+	ENST00000322157.8@NPEPPS	ENST00000322157.8	protein_coding	47531064,47545909,47569417,47579390,47582742,47585500,47586148,47586365,47587230,47590717,47591956,47592485,47596353,47599676,47601608,47603915,47605333,47612460,47613669,47618350,47619009,47619737,47621768	47531555,47545993,47569494,47579511,47582849,47585700,47586244,47586398,47587344,47590881,47592060,47592545,47596462,47599739,47601747,47604049,47605552,47612602,47613725,47618457,47619164,47619784,47623276	Gene ID= ENSG00000141279.15 TPM= 78.28 Transcript Type= protein_coding
chr17	47531145	47622117	47531145	47622117	+	transcript4009.chr17.nnic@NPEPPS	transcript4009.chr17.nnic	protein_coding	47531145,47545909,47569417,47579390,47582742,47585500,47586148,47586365,47587230,47590717,47592485,47596353,47599676,47601608,47603915,47605333,47612460,47613669,47618350,47619009,47619737,47621768	47531555,47545993,47569494,47579511,47582849,47585700,47586244,47586398,47587344,47590881,47592545,47596462,47599739,47601747,47604049,47605552,47612602,47613725,47618457,47619164,47619784,47622117	Gene ID= ENSG00000141279.15 TPM= 8.77 Transcript Type= NA
chr17	47649838	47685505	47649838	47685505	+	ENST00000290158.8@KPNB1	ENST00000290158.8	protein_coding	47649838,47650386,47652694,47656860,47658508,47661119,47663089,47664159,47665057,47668186,47669678,47670702,47673018,47673490,47674638,47676409,47677020,47678046,47678308,47680020,47680508,47682404	47650284,47650444,47652876,47657060,47658660,47661178,47663178,47664269,47665158,47668410,47669869,47670832,47673165,47673561,47674782,47676491,47677127,47678189,47678413,47680134,47680669,47685505	Gene ID= ENSG00000108424.9 TPM= 32.5 Transcript Type= protein_coding
chr17	47649952	47682680	47649952	47682680	+	transcript4025.chr17.nnic@KPNB1	transcript4025.chr17.nnic	protein_coding	47649952,47652694,47656860,47658508,47661119,47663089,47664159,47665057,47668186,47669678,47670702,47673018,47673490,47674638,47676409,47677020,47678046,47678308,47680020,47680508,47682404	47650102,47652876,47657060,47658660,47661178,47663178,47664269,47665158,47668410,47669869,47670832,47673165,47673561,47674782,47676491,47677127,47678189,47678413,47680134,47680669,47682680	Gene ID= ENSG00000108424.9 TPM= 11.1 Transcript Type= NA
chr17	47700291	47702407	47700291	47702407	-	transcript4034.chr17.nnic@NA	transcript4034.chr17.nnic	NA	47700291	47702407	Gene ID= novel_gene_chr17_4035 TPM= 13.51 Transcript Type= NA
chr17	47823490	47831534	47823490	47831534	-	ENST00000414011.1@MRPL10	ENST00000414011.1	protein_coding	47831460,47829139,47828501,47827040,47826637,47823490	47831534,47829236,47828670,47827204,47826781,47824458	Gene ID= ENSG00000159111.12 TPM= 18.34 Transcript Type= protein_coding
chr17	47837700	47841333	47837700	47841333	-	ENST00000290216.13@SCRN2	ENST00000290216.13	protein_coding	47841208,47840670,47840191,47839444,47838791,47838531,47838270,47837700	47841333,47840843,47840372,47839643,47839006,47838696,47838450,47838002	Gene ID= ENSG00000141295.13 TPM= 13.51 Transcript Type= protein_coding
chr17	47837692	47841272	47837692	47841272	-	transcript4050.chr17.nic@SCRN2	transcript4050.chr17.nic	protein_coding	47841208,47840670,47839444,47838791,47838531,47837692	47841272,47840843,47840372,47839006,47838696,47838450	Gene ID= ENSG00000141295.13 TPM= 1.93 Transcript Type= NA
chr17	47837692	47841289	47837692	47841289	-	ENST00000407215.7@SCRN2	ENST00000407215.7	protein_coding	47841208,47840670,47840191,47839444,47838791,47838531,47837692	47841289,47840843,47840372,47839643,47839006,47838696,47838450	Gene ID= ENSG00000141295.13 TPM= 6.76 Transcript Type= protein_coding
chr17	47891255	47895812	47891255	47895812	-	ENST00000582787.1@AC018521.5	ENST00000582787.1	processed_transcript	47895703,47893900,47891255	47895812,47893958,47891581	Gene ID= ENSG00000264920.1 TPM= 14.48 Transcript Type= lincRNA
chr17	47896150	47928957	47896150	47928957	+	ENST00000376741.4@SP2	ENST00000376741.4	protein_coding	47896150,47915312,47916156,47922962,47924919,47925348,47927724	47896293,47915388,47917130,47923274,47925093,47925541,47928957	Gene ID= ENSG00000167182.14 TPM= 14.48 Transcript Type= protein_coding
chr17	47941523	47949308	47941523	47949308	+	ENST00000642017.1@PNPO	ENST00000642017.1	protein_coding	47941523,47943306,47944616,47945559,47945861,47946323,47946614	47941813,47943430,47944715,47945612,47945989,47946393,47949308	Gene ID= ENSG00000108439.10 TPM= 58.4 Transcript Type= protein_coding
chr17	47941567	47948272	47941567	47948272	+	ENST00000225573.5@PNPO	ENST00000225573.5	protein_coding	47941567,47943306,47944616,47945559,47946323,47946614	47941813,47943430,47944715,47945612,47946393,47948272	Gene ID= ENSG00000108439.10 TPM= 10.62 Transcript Type= protein_coding
chr17	47941548	47949287	47941548	47949287	+	ENST00000641323.1@PNPO	ENST00000641323.1	protein_coding	47941548,47943306,47944616,47945559,47945861,47946323,47946614	47942051,47943430,47944715,47945612,47945989,47946393,47949287	Gene ID= ENSG00000108439.10 TPM= 12.07 Transcript Type= nonsense_mediated_decay
chr17	47971018	47981768	47971018	47981768	+	transcript4078.chr17.nic@CDK5RAP3	transcript4078.chr17.nic	protein_coding	47971018,47971362,47973519,47974400,47975514,47976712,47977832,47978829,47980593,47981163,47981437	47971152,47971407,47974031,47975337,47976013,47976822,47977910,47978917,47980798,47981334,47981768	Gene ID= ENSG00000108465.14 TPM= 1.93 Transcript Type= NA
chr17	47971104	47981772	47971104	47981772	+	ENST00000584063.5@CDK5RAP3	ENST00000584063.5	protein_coding	47971104,47971362,47973519,47973931,47974400,47975514,47976712,47977832,47978829,47980593,47981163,47981437	47971152,47971407,47973650,47974031,47975337,47976013,47976822,47977910,47978917,47980798,47981334,47981772	Gene ID= ENSG00000108465.14 TPM= 1.93 Transcript Type= retained_intron
chr17	48026167	48037868	48026167	48037868	-	transcript4082.chr17.nic@COPZ2	transcript4082.chr17.nic	protein_coding	48037667,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48027676,48026167	48037868,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48027789,48026475	Gene ID= ENSG00000005243.9 TPM= 18.34 Transcript Type= NA
chr17	48026167	48037806	48026167	48037806	-	transcript4084.chr17.nic@COPZ2	transcript4084.chr17.nic	protein_coding	48037667,48036851,48033863,48032686,48032156,48029125,48028472,48027676,48026167	48037806,48036925,48033944,48032741,48032233,48029176,48028510,48027789,48026475	Gene ID= ENSG00000005243.9 TPM= 1.93 Transcript Type= NA
chr17	48026172	48037784	48026172	48037784	-	transcript4088.chr17.nic@COPZ2	transcript4088.chr17.nic	protein_coding	48037667,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48026172	48037784,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48027789	Gene ID= ENSG00000005243.9 TPM= 1.93 Transcript Type= NA
chr17	48026167	48037805	48026167	48037805	-	transcript4092.chr17.nnic@COPZ2	transcript4092.chr17.nnic	protein_coding	48037667,48033863,48033211,48032686,48032156,48029125,48028472,48026167	48037805,48033944,48033302,48032741,48032233,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 2.9 Transcript Type= NA
chr17	48026167	48037812	48026167	48037812	-	transcript4093.chr17.nic@COPZ2	transcript4093.chr17.nic	protein_coding	48037667,48036851,48033863,48032686,48032156,48029125,48028472,48026167	48037812,48036925,48033944,48032741,48032233,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 3.86 Transcript Type= NA
chr17	48026167	48037805	48026167	48037805	-	transcript4094.chr17.nic@COPZ2	transcript4094.chr17.nic	protein_coding	48037667,48036851,48033863,48033211,48032686,48029125,48028472,48026167	48037805,48036925,48033944,48033302,48032741,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 1.93 Transcript Type= NA
chr17	48031646	48037794	48031646	48037794	-	transcript4098.chr17.nic@COPZ2	transcript4098.chr17.nic	protein_coding	48037667,48036851,48033863,48033211,48032686,48031646	48037794,48036925,48033944,48033302,48032741,48032233	Gene ID= ENSG00000005243.9 TPM= 1.93 Transcript Type= NA
chr17	48026171	48037782	48026171	48037782	-	ENST00000621465.4@COPZ2	ENST00000621465.4	protein_coding	48037667,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48026171	48037782,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 29.92 Transcript Type= protein_coding
chr17	48046885	48048576	48046885	48048576	-	transcript4161.chr17.nnic@NA	transcript4161.chr17.nnic	NA	48046885	48048576	Gene ID= novel_gene_chr17_4162 TPM= 4.83 Transcript Type= NA
chr17	48048323	48061484	48048323	48061484	+	transcript4133.chr17.nnic@NFE2L1	transcript4133.chr17.nnic	protein_coding	48048323,48050607,48058489	48048462,48050673,48061484	Gene ID= ENSG00000082641.15 TPM= 82.81 Transcript Type= NA
chr17	48048370	48061479	48048370	48061479	+	ENST00000357480.9@NFE2L1	ENST00000357480.9	protein_coding	48048370,48050607,48056386,48057344,48058295	48048462,48051628,48056598,48057502,48061479	Gene ID= ENSG00000082641.15 TPM= 153.16 Transcript Type= protein_coding
chr17	48048359	48061480	48048359	48061480	+	ENST00000362042.7@NFE2L1	ENST00000362042.7	protein_coding	48048359,48050607,48056386,48057032,48057344,48058295	48048462,48051628,48056598,48057121,48057502,48061480	Gene ID= ENSG00000082641.15 TPM= 130.62 Transcript Type= protein_coding
chr17	48107558	48123074	48107558	48123074	+	ENST00000393405.6@SNX11	ENST00000393405.6	protein_coding	48107558,48110708,48112031,48112574,48113301,48118704,48118974,48121235	48107838,48110767,48112085,48112660,48113401,48118799,48119186,48123074	Gene ID= ENSG00000002919.14 TPM= 2.25 Transcript Type= protein_coding
chr17	48107541	48122743	48107541	48122743	+	transcript4165.chr17.nic@SNX11	transcript4165.chr17.nic	protein_coding	48107541,48112031,48112574,48113301,48118704,48118974,48121235	48107596,48112085,48112660,48113401,48118799,48119186,48122743	Gene ID= ENSG00000002919.14 TPM= 2.25 Transcript Type= NA
chr17	48107585	48122743	48107585	48122743	+	ENST00000359238.6@SNX11	ENST00000359238.6	protein_coding	48107585,48112031,48112574,48113301,48118704,48118974,48121235	48107838,48112085,48112660,48113401,48118799,48119186,48122743	Gene ID= ENSG00000002919.14 TPM= 24.45 Transcript Type= protein_coding
chr17	48542655	48544989	48542655	48544989	-	ENST00000330070.5@HOXB2	ENST00000330070.5	protein_coding	48544521,48542655	48544989,48543747	Gene ID= ENSG00000173917.10 TPM= 8.69 Transcript Type= protein_coding
chr17	48548870	48553922	48548870	48553922	-	ENST00000470495.1@HOXB3	ENST00000470495.1	protein_coding	48552027,48548870	48553922,48551181	Gene ID= ENSG00000120093.11 TPM= 1.93 Transcript Type= protein_coding
chr17	48595751	48604992	48595751	48604992	-	ENST00000484302.3@HOXB6	ENST00000484302.3	protein_coding	48604480,48597736,48595751	48604992,48598260,48596672	Gene ID= ENSG00000108511.9 TPM= 2.9 Transcript Type= protein_coding
chr17	48607227	48611020	48607227	48611020	-	ENST00000239165.8@HOXB7	ENST00000239165.8	protein_coding	48610519,48607227	48611020,48608095	Gene ID= ENSG00000260027.4 TPM= 1.93 Transcript Type= protein_coding
chr17	48830988	48865245	48830988	48865245	+	ENST00000258947.7@CALCOCO2	ENST00000258947.7	protein_coding	48830988,48841698,48848064,48848322,48849252,48851089,48851559,48852506,48852926,48856092,48860314,48862276,48862838	48831078,48841887,48848166,48848455,48849377,48851177,48851628,48852628,48853012,48856187,48860449,48862304,48865245	Gene ID= ENSG00000136436.14 TPM= 27.35 Transcript Type= protein_coding
chr17	48866757	48868211	48866757	48868211	+	transcript4206.chr17.nnic@NA	transcript4206.chr17.nnic	NA	48866757	48868211	Gene ID= novel_gene_chr17_4207 TPM= 3.86 Transcript Type= NA
chr17	48874279	48892388	48874279	48892388	-	transcript4208.chr17.nic@SUMO2P17	transcript4208.chr17.nic	transcribed_processed_pseudogene	48892247,48879264,48874279	48892388,48879345,48875039	Gene ID= ENSG00000248278.1 TPM= 2.9 Transcript Type= NA
chr17	48892817	48895869	48892817	48895869	+	ENST00000393366.6@ATP5G1	ENST00000393366.6	protein_coding	48892817,48893409,48894372,48895156,48895655	48892910,48893456,48894449,48895334,48895869	Gene ID= ENSG00000159199.13 TPM= 77.22 Transcript Type= protein_coding
chr17	48892765	48895871	48892765	48895871	+	ENST00000355938.9@ATP5G1	ENST00000355938.9	protein_coding	48892765,48893409,48894372,48895156,48895655	48892840,48893456,48894449,48895334,48895871	Gene ID= ENSG00000159199.13 TPM= 175.69 Transcript Type= protein_coding
chr17	48892817	48895871	48892817	48895871	+	ENST00000506855.1@ATP5G1	ENST00000506855.1	protein_coding	48892817,48893409,48895156,48895655	48892840,48893456,48895334,48895871	Gene ID= ENSG00000159199.13 TPM= 1.93 Transcript Type= protein_coding
chr17	48892797	48895871	48892797	48895871	+	ENST00000503641.5@ATP5G1	ENST00000503641.5	protein_coding	48892797,48893409,48894372,48895183,48895655	48892840,48893456,48894449,48895334,48895871	Gene ID= ENSG00000159199.13 TPM= 1.69 Transcript Type= protein_coding
chr17	48892767	48895868	48892767	48895868	+	ENST00000513347.1@ATP5G1	ENST00000513347.1	protein_coding	48892767,48893409,48895655	48892840,48895334,48895868	Gene ID= ENSG00000159199.13 TPM= 2.17 Transcript Type= retained_intron
chr17	48908369	48929056	48908369	48929056	+	ENST00000360943.9@UBE2Z	ENST00000360943.9	protein_coding	48908369,48910808,48912834,48916076,48921160,48922847,48926964	48908820,48910880,48913021,48916187,48921272,48922937,48929056	Gene ID= ENSG00000159202.17 TPM= 27.99 Transcript Type= protein_coding
chr17	48929316	48945117	48929316	48945117	-	ENST00000502492.5@SNF8	ENST00000502492.5	protein_coding	48944681,48943925,48940924,48937020,48936170,48933205,48931643,48929316	48945117,48943975,48941062,48937124,48936242,48933346,48931717,48930612	Gene ID= ENSG00000159210.9 TPM= 98.46 Transcript Type= protein_coding
chr17	48930374	48944810	48930374	48944810	-	ENST00000290330.7@SNF8	ENST00000290330.7	protein_coding	48944681,48943925,48940924,48937020,48936170,48933205,48931643,48930374	48944810,48943975,48941062,48937124,48936242,48933346,48931714,48930612	Gene ID= ENSG00000159210.9 TPM= 100.39 Transcript Type= protein_coding
chr17	49210227	49223225	49210227	49223225	+	ENST00000225941.5@ABI3	ENST00000225941.5	protein_coding	49210227,49216531,49217739,49219540,49219858,49220169,49222091,49222552	49210841,49216698,49217915,49219625,49219953,49220326,49222225,49223225	Gene ID= ENSG00000108798.8 TPM= 5.79 Transcript Type= protein_coding
chr17	49404049	49414905	49404049	49414905	-	ENST00000614445.4@PHB	ENST00000614445.4	protein_coding	49414835,49414242,49413177,49411678,49409331,49409042,49406759,49404049	49414905,49414333,49413291,49411839,49409473,49409158,49406854,49405204	Gene ID= ENSG00000167085.11 TPM= 20.27 Transcript Type= protein_coding
chr17	49404052	49414880	49404052	49414880	-	ENST00000300408.7@PHB	ENST00000300408.7	protein_coding	49414835,49413177,49411678,49409331,49409042,49406759,49404052	49414880,49413291,49411839,49409473,49409158,49406854,49405204	Gene ID= ENSG00000167085.11 TPM= 97.5 Transcript Type= protein_coding
chr17	49495293	49515017	49495293	49515017	+	ENST00000172229.7@NGFR	ENST00000172229.7	protein_coding	49495293,49502063,49506299,49510412,49511892,49512708	49495483,49502204,49506658,49510664,49512052,49515017	Gene ID= ENSG00000064300.8 TPM= 2.9 Transcript Type= protein_coding
chr17	49600006	49678110	49600006	49678110	-	transcript4247.chr17.nic@SPOP	transcript4247.chr17.nic	protein_coding	49677933,49668027,49636759,49622733,49622206,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49600006	49678110,49668078,49636809,49622876,49622283,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 1.93 Transcript Type= NA
chr17	49600006	49678105	49600006	49678105	-	transcript4248.chr17.nic@SPOP	transcript4248.chr17.nic	protein_coding	49677933,49675895,49668027,49636759,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49600006	49678105,49676016,49668078,49636809,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 3.86 Transcript Type= NA
chr17	49599507	49678097	49599507	49678097	-	transcript4251.chr17.nic@SPOP	transcript4251.chr17.nic	protein_coding	49677933,49668027,49636759,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49599507	49678097,49668078,49636809,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 3.09 Transcript Type= NA
chr17	49600006	49678105	49600006	49678105	-	transcript4256.chr17.nic@SPOP	transcript4256.chr17.nic	protein_coding	49677933,49675895,49668027,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49600006	49678105,49676016,49668078,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 7.72 Transcript Type= NA
chr17	49598886	49678163	49598886	49678163	-	ENST00000347630.6@SPOP	ENST00000347630.6	protein_coding	49677933,49636759,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49598886	49678163,49636809,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 2.12 Transcript Type= protein_coding
chr17	49599284	49678037	49599284	49678037	-	transcript4259.chr17.nic@SPOP	transcript4259.chr17.nic	protein_coding	49677933,49668027,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49599284	49678037,49668078,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 2.12 Transcript Type= NA
chr17	49598884	49678110	49598884	49678110	-	ENST00000393328.6@SPOP	ENST00000393328.6	protein_coding	49677933,49675895,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49598884	49678110,49676016,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 1.16 Transcript Type= protein_coding
chr17	49600006	49678234	49600006	49678234	-	ENST00000504102.5@SPOP	ENST00000504102.5	protein_coding	49677933,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49600006	49678234,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 15.44 Transcript Type= protein_coding
chr17	49700943	49708199	49700943	49708199	-	ENST00000240333.10@SLC35B1	ENST00000240333.10	protein_coding	49707730,49706965,49706204,49705866,49705124,49704100,49703188,49702858,49700943	49708199,49707068,49706334,49705896,49705281,49704226,49703294,49703011,49701510	Gene ID= ENSG00000121073.13 TPM= 8.69 Transcript Type= protein_coding
chr17	49710332	49764167	49710332	49764167	-	ENST00000240364.6@FAM117A	ENST00000240364.6	protein_coding	49763892,49732551,49722499,49720326,49719760,49717513,49716165,49710332	49764167,49732720,49722594,49720436,49719894,49717714,49716315,49711555	Gene ID= ENSG00000121104.7 TPM= 3.86 Transcript Type= protein_coding
chr17	49788555	49835030	49788555	49835030	+	ENST00000259021.8@KAT7	ENST00000259021.8	protein_coding	49788555,49791886,49796750,49798319,49805363,49809119,49811476,49815803,49817820,49821337,49821650,49823202,49826000,49826693,49827401	49788849,49792033,49796926,49798558,49805445,49809208,49811574,49815913,49818011,49821426,49821790,49823295,49826146,49826799,49835030	Gene ID= ENSG00000136504.11 TPM= 35.72 Transcript Type= protein_coding
chr17	49788706	49829096	49788706	49829096	+	ENST00000424009.6@KAT7	ENST00000424009.6	protein_coding	49788706,49791886,49796750,49798319,49805363,49811476,49815803,49817820,49821337,49821650,49823202,49826000,49826693,49827401	49788849,49792033,49796926,49798558,49805445,49811574,49815913,49818011,49821426,49821790,49823295,49826146,49826799,49829096	Gene ID= ENSG00000136504.11 TPM= 27.99 Transcript Type= protein_coding
chr17	50095275	50112152	50095275	50112152	+	ENST00000503176.5@PDK2	ENST00000503176.5	protein_coding	50095275,50097423,50105371,50105885,50106794,50107076,50108156,50108319,50108612,50109287,50109957	50095553,50097564,50105442,50106069,50106883,50107153,50108232,50108417,50108719,50109400,50112152	Gene ID= ENSG00000005882.11 TPM= 189.68 Transcript Type= protein_coding
chr17	50095695	50111368	50095695	50111368	+	ENST00000614357.4@PDK2	ENST00000614357.4	protein_coding	50095695,50097423,50105371,50105885,50106794,50107076,50108156,50108319,50108612,50109287,50109957	50095810,50097564,50105442,50106069,50106883,50107153,50108232,50108417,50108719,50109400,50111368	Gene ID= ENSG00000005882.11 TPM= 1.45 Transcript Type= protein_coding
chr17	50095387	50106368	50095387	50106368	+	ENST00000505897.5@PDK2	ENST00000505897.5	protein_coding	50095387,50097423,50105371,50105885	50095553,50097564,50105442,50106368	Gene ID= ENSG00000005882.11 TPM= 1.93 Transcript Type= retained_intron
chr17	50098473	50099564	50098473	50099564	-	transcript4304.chr17.nnic@NA	transcript4304.chr17.nnic	NA	50098473	50099564	Gene ID= novel_gene_chr17_4305 TPM= 1.93 Transcript Type= NA
chr17	50165996	50175928	50165996	50175928	+	transcript4308.chr17.nic@SGCA	transcript4308.chr17.nic	protein_coding	50165996,50167368,50167582,50167947,50168374,50169092,50170143,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50169104,50170351,50170666,50175449,50175928	Gene ID= ENSG00000108823.15 TPM= 9.85 Transcript Type= NA
chr17	50165996	50175928	50165996	50175928	+	transcript4312.chr17.nic@SGCA	transcript4312.chr17.nic	protein_coding	50165996,50167368,50167582,50167947,50168374,50169092,50170143,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50169254,50170351,50170666,50175375,50175928	Gene ID= ENSG00000108823.15 TPM= 11.83 Transcript Type= NA
chr17	50165996	50175928	50165996	50175928	+	transcript4322.chr17.nic@SGCA	transcript4322.chr17.nic	protein_coding	50165996,50167368,50167947,50168374,50169092,50170143,50170640,50175257,50175712	50166077,50167487,50168019,50168572,50169254,50170351,50170666,50175449,50175928	Gene ID= ENSG00000108823.15 TPM= 14.77 Transcript Type= NA
chr17	50165996	50175928	50165996	50175928	+	transcript4332.chr17.nic@SGCA	transcript4332.chr17.nic	protein_coding	50165996,50167368,50167947,50168374,50170640,50175257,50175712	50166077,50167487,50168019,50168572,50170666,50175449,50175928	Gene ID= ENSG00000108823.15 TPM= 12.74 Transcript Type= NA
chr17	50166005	50175928	50166005	50175928	+	transcript4341.chr17.nnic@SGCA	transcript4341.chr17.nnic	protein_coding	50166005,50170640,50175257,50175712	50166077,50170666,50175449,50175928	Gene ID= ENSG00000108823.15 TPM= 39.77 Transcript Type= NA
chr17	50166005	50175931	50166005	50175931	+	ENST00000262018.7@SGCA	ENST00000262018.7	protein_coding	50166005,50167368,50167582,50167947,50168374,50169092,50170143,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50169254,50170351,50170666,50175449,50175931	Gene ID= ENSG00000108823.15 TPM= 300.59 Transcript Type= protein_coding
chr17	50166005	50175928	50166005	50175928	+	ENST00000344627.10@SGCA	ENST00000344627.10	protein_coding	50166005,50167368,50167582,50167947,50168374,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50170666,50175449,50175928	Gene ID= ENSG00000108823.15 TPM= 46.53 Transcript Type= protein_coding
chr17	50183289	50201632	50183289	50201632	-	ENST00000225964.9@COL1A1	ENST00000225964.9	protein_coding	50201411,50199753,50199556,50199418,50199226,50198433,50198161,50197949,50197732,50197180,50197010,50196617,50196484,50196314,50196155,50195923,50195567,50195434,50195232,50195047,50194721,50194573,50194349,50194130,50193943,50192994,50192797,50192640,50192475,50191980,50191788,50191383,50190817,50190543,50190327,50190001,50189859,50189679,50189377,50189168,50188903,50188742,50188530,50188096,50187876,50187484,50187015,50186640,50186317,50185778,50183289	50201632,50199947,50199590,50199453,50199327,50198504,50198205,50198002,50197785,50197233,50197063,50196670,50196528,50196367,50196199,50195976,50195665,50195478,50195330,50195100,50194828,50194626,50194447,50194183,50194041,50193047,50192850,50192693,50192528,50192024,50191886,50191490,50190924,50190596,50190380,50190108,50189912,50189732,50189538,50189275,50189010,50188795,50188637,50188149,50187983,50187537,50187122,50186922,50186507,50186020,50185648	Gene ID= ENSG00000108821.13 TPM= 4.83 Transcript Type= protein_coding
chr17	50367868	50373196	50367868	50373196	-	ENST00000503633.5@MRPL27	ENST00000503633.5	protein_coding	50373131,50370455,50370032,50368838,50367868	50373196,50370586,50370099,50368867,50368313	Gene ID= ENSG00000108826.15 TPM= 2.41 Transcript Type= protein_coding
chr17	50367867	50373214	50367867	50373214	-	ENST00000225969.8@MRPL27	ENST00000225969.8	protein_coding	50373131,50370455,50370032,50367867	50373214,50370586,50370099,50368298	Gene ID= ENSG00000108826.15 TPM= 137.56 Transcript Type= protein_coding
chr17	50367868	50373207	50367868	50373207	-	ENST00000442592.3@MRPL27	ENST00000442592.3	protein_coding	50373131,50370455,50367868	50373207,50370586,50370099	Gene ID= ENSG00000108826.15 TPM= 1.93 Transcript Type= protein_coding
chr17	50381238	50397553	50381238	50397553	-	ENST00000225972.7@LRRC59	ENST00000225972.7	protein_coding	50397213,50394929,50392739,50392398,50388060,50385118,50381238	50397553,50394988,50392897,50392502,50388132,50385291,50383235	Gene ID= ENSG00000108829.9 TPM= 51.16 Transcript Type= protein_coding
chr17	50426158	50474835	50426158	50474835	+	ENST00000300441.8@ACSF2	ENST00000300441.8	protein_coding	50426158,50460677,50461242,50461633,50462184,50462420,50463156,50463395,50463818,50464218,50471028,50472428,50473665,50473894,50474199,50474502	50426389,50460872,50461370,50461686,50462302,50462585,50463251,50463552,50463909,50464294,50471135,50472579,50473806,50474004,50474267,50474835	Gene ID= ENSG00000167107.12 TPM= 23.17 Transcript Type= protein_coding
chr17	50464498	50468966	50464498	50468966	-	ENST00000508540.5@CHAD	ENST00000508540.5	protein_coding	50468040,50465707,50465294,50464498	50468966,50465870,50465439,50465049	Gene ID= ENSG00000136457.9 TPM= 1.93 Transcript Type= protein_coding
chr17	50466075	50469672	50466075	50469672	-	transcript4361.chr17.nnic@NA	transcript4361.chr17.nnic	NA	50466075	50469672	Gene ID= novel_gene_chr17_4362 TPM= 12.55 Transcript Type= NA
chr17	50478800	50485975	50478800	50485975	+	ENST00000258955.6@RSAD1	ENST00000258955.6	protein_coding	50478800,50479629,50479880,50482091,50482643,50483340,50483706,50484442,50484744	50479019,50479762,50480084,50482456,50482706,50483487,50483760,50484545,50485975	Gene ID= ENSG00000136444.9 TPM= 155.42 Transcript Type= protein_coding
chr17	50547089	50555852	50547089	50555852	+	ENST00000006658.10@SPATA20	ENST00000006658.10	protein_coding	50547089,50547720,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555852	Gene ID= ENSG00000006282.20 TPM= 20.59 Transcript Type= protein_coding
chr17	50547127	50555850	50547127	50555850	+	ENST00000503127.5@SPATA20	ENST00000503127.5	protein_coding	50547127,50547665,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555850	Gene ID= ENSG00000006282.20 TPM= 10.94 Transcript Type= nonsense_mediated_decay
chr17	50547163	50555852	50547163	50555852	+	transcript4379.chr17.nic@SPATA20	transcript4379.chr17.nic	protein_coding	50547163,50547665,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551969,50554251,50555232,50555492	50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551679,50552180,50554450,50555312,50555852	Gene ID= ENSG00000006282.20 TPM= 2.9 Transcript Type= NA
chr17	50547126	50555852	50547126	50555852	+	ENST00000356488.8@SPATA20	ENST00000356488.8	protein_coding	50547126,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50547285,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555852	Gene ID= ENSG00000006282.20 TPM= 15.76 Transcript Type= protein_coding
chr17	50693190	50707924	50693190	50707924	-	ENST00000285243.6@ANKRD40	ENST00000285243.6	protein_coding	50707521,50700568,50699399,50696940,50693190	50707924,50700716,50699893,50697121,50696143	Gene ID= ENSG00000154945.6 TPM= 91.7 Transcript Type= protein_coding
chr17	50703734	50705433	50703734	50705433	+	transcript4395.chr17.nnic@NA	transcript4395.chr17.nnic	NA	50703734	50705433	Gene ID= novel_gene_chr17_4396 TPM= 1.93 Transcript Type= NA
chr17	50719544	50756213	50719544	50756213	+	ENST00000505658.5@LUC7L3	ENST00000505658.5	protein_coding	50719544,50736960,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501	50719831,50737026,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50756213	Gene ID= ENSG00000108848.15 TPM= 11.58 Transcript Type= protein_coding
chr17	50862223	50866345	50862223	50866345	-	ENST00000499247.2@TOB1	ENST00000499247.2	protein_coding	50866058,50862223	50866345,50864163	Gene ID= ENSG00000141232.4 TPM= 144.8 Transcript Type= protein_coding
chr17	50866679	50868307	50866679	50868307	+	ENST00000416263.3@TOB1-AS1	ENST00000416263.3	processed_transcript	50866679,50867496	50867217,50868307	Gene ID= ENSG00000229980.4 TPM= 4.83 Transcript Type= antisense_RNA
chr17	50965644	51120908	50965644	51120908	-	transcript4415.chr17.nic@SPAG9	transcript4415.chr17.nic	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50999476,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50975863,50974771,50970707,50965644	51120908,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50999487,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50975901,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 9.36 Transcript Type= NA
chr17	50965644	51120908	50965644	51120908	-	transcript4425.chr17.nnic@SPAG9	transcript4425.chr17.nnic	protein_coding	51120354,51079584,51067932,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50974771,50970707,50965644	51120908,51079704,51068012,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 2.25 Transcript Type= NA
chr17	50976600	51120908	50976600	51120908	-	transcript4431.chr17.nic@SPAG9	transcript4431.chr17.nic	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50976600	51120908,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221	Gene ID= ENSG00000008294.20 TPM= 3.09 Transcript Type= NA
chr17	50965644	51120865	50965644	51120865	-	ENST00000357122.8@SPAG9	ENST00000357122.8	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50974771,50970707,50965644	51120865,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 14.03 Transcript Type= protein_coding
chr17	50965627	51120734	50965627	51120734	-	ENST00000505279.5@SPAG9	ENST00000505279.5	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50999476,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50974771,50970707,50965627	51120734,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50999487,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 3.21 Transcript Type= protein_coding
chr17	51153576	51162061	51153576	51162061	+	ENST00000336097.7@NME1	ENST00000336097.7	protein_coding	51153576,51154225,51155651,51159980,51161160,51161728	51153662,51154444,51155780,51160081,51161272,51162061	Gene ID= ENSG00000239672.7 TPM= 3.86 Transcript Type= protein_coding
chr17	51153536	51162195	51153536	51162195	+	ENST00000393196.7@NME1	ENST00000393196.7	protein_coding	51153536,51155651,51159980,51161160,51161728	51153662,51155780,51160081,51161272,51162195	Gene ID= ENSG00000239672.7 TPM= 40.54 Transcript Type= protein_coding
chr17	51153590	51171744	51153590	51171744	+	ENST00000393193.6@NME1-NME2	ENST00000393193.6	protein_coding	51153590,51155651,51159980,51161160,51166827,51168242,51169937,51171487	51153662,51155780,51160081,51161272,51166956,51168343,51170049,51171744	Gene ID= ENSG00000011052.21 TPM= 6.35 Transcript Type= protein_coding
chr17	51166418	51171744	51166418	51171744	+	ENST00000503064.5@NME2	ENST00000503064.5	protein_coding	51166418,51166827,51168242,51169937,51171487	51166563,51166956,51168343,51170049,51171744	Gene ID= ENSG00000243678.11 TPM= 10.54 Transcript Type= protein_coding
chr17	51166564	51171744	51166564	51171744	+	ENST00000393190.4@NME2	ENST00000393190.4	protein_coding	51166564,51168242,51169937,51171487	51166956,51168343,51170049,51171744	Gene ID= ENSG00000243678.11 TPM= 71.99 Transcript Type= protein_coding
chr17	51166278	51171747	51166278	51171747	+	ENST00000512737.5@NME2	ENST00000512737.5	protein_coding	51166278,51166827,51168242,51169937,51171487	51166497,51166956,51168343,51170049,51171747	Gene ID= ENSG00000243678.11 TPM= 284.36 Transcript Type= protein_coding
chr17	51166420	51171744	51166420	51171744	+	ENST00000393183.7@NME2	ENST00000393183.7	protein_coding	51166420,51166827,51168242,51171487	51166497,51166956,51168343,51171744	Gene ID= ENSG00000243678.11 TPM= 8.04 Transcript Type= protein_coding
chr17	51260553	51297933	51260553	51297933	+	transcript4458.chr17.nnic@UTP18	transcript4458.chr17.nnic	protein_coding	51260553,51263274,51266182,51268837,51273362,51275866,51277130,51280005,51280389,51282349,51285245,51288029,51288548,51293903,51296965,51297782	51260926,51263386,51266280,51268904,51273450,51275991,51277304,51280105,51280479,51282378,51285368,51288203,51288591,51294045,51297003,51297933	Gene ID= ENSG00000011260.13 TPM= 1.93 Transcript Type= NA
chr17	51260528	51297933	51260528	51297933	+	ENST00000225298.11@UTP18	ENST00000225298.11	protein_coding	51260528,51263274,51266182,51268837,51273362,51275866,51277130,51280005,51280389,51285245,51288029,51293903,51296965,51297782	51260926,51263386,51266280,51268904,51273450,51275991,51277304,51280105,51280479,51285368,51288203,51294045,51297003,51297933	Gene ID= ENSG00000011260.13 TPM= 34.75 Transcript Type= protein_coding
chr17	54961206	54968785	54961206	54968785	-	ENST00000299335.7@COX11	ENST00000299335.7	protein_coding	54968281,54964697,54963306,54961206	54968785,54964852,54963431,54962915	Gene ID= ENSG00000166260.11 TPM= 14.48 Transcript Type= protein_coding
chr17	54962903	54968703	54962903	54968703	-	ENST00000571584.1@COX11	ENST00000571584.1	protein_coding	54968281,54964697,54962903	54968703,54964852,54963431	Gene ID= ENSG00000166260.11 TPM= 3.86 Transcript Type= protein_coding
chr17	54957520	54958746	54957520	54958746	+	transcript4475.chr17.nnic@NA	transcript4475.chr17.nnic	NA	54957520	54958746	Gene ID= novel_gene_chr17_4476 TPM= 8.69 Transcript Type= NA
chr17	55392613	55421992	55392613	55421992	-	ENST00000262065.7@MMD	ENST00000262065.7	protein_coding	55421670,55414151,55411257,55407746,55403767,55401469,55392613	55421992,55414232,55411417,55407820,55403868,55401538,55394534	Gene ID= ENSG00000108960.7 TPM= 9.65 Transcript Type= protein_coding
chr17	55419661	55421982	55419661	55421982	-	transcript4480.chr17.nnic@NA	transcript4480.chr17.nnic	NA	55419661	55421982	Gene ID= novel_gene_chr17_4481 TPM= 2.9 Transcript Type= NA
chr17	55750979	55777374	55750979	55777374	+	ENST00000268896.9@PCTP	ENST00000268896.9	protein_coding	55750979,55767335,55771106,55773724,55774792,55776035	55751244,55767452,55771185,55773895,55774859,55777374	Gene ID= ENSG00000141179.13 TPM= 13.51 Transcript Type= protein_coding
chr17	55751094	55823090	55751094	55823090	+	ENST00000573500.5@PCTP	ENST00000573500.5	protein_coding	55751094,55767335,55771106,55773724,55774792,55822761	55751244,55767452,55771185,55773895,55774859,55823090	Gene ID= ENSG00000141179.13 TPM= 2.9 Transcript Type= protein_coding
chr17	56593699	56595590	56593699	56595590	+	ENST00000332822.4@NOG	ENST00000332822.4	protein_coding	56593699	56595590	Gene ID= ENSG00000183691.4 TPM= 15.44 Transcript Type= protein_coding
chr17	56887909	56914038	56887909	56914038	-	ENST00000316881.8@TRIM25	ENST00000316881.8	protein_coding	56913392,56908468,56904255,56901419,56899115,56895926,56895521,56895343,56887909	56914038,56908563,56904488,56901578,56899180,56895952,56895604,56895441,56892229	Gene ID= ENSG00000121060.16 TPM= 6.76 Transcript Type= protein_coding
chr17	56938187	56961054	56938187	56961054	-	ENST00000240316.4@COIL	ENST00000240316.4	protein_coding	56960775,56949889,56949681,56949387,56946442,56942035,56938187	56961054,56950996,56949767,56949434,56946511,56942123,56939154	Gene ID= ENSG00000121058.4 TPM= 34.75 Transcript Type= protein_coding
chr17	56938187	56961050	56938187	56961050	-	transcript4500.chr17.nic@COIL	transcript4500.chr17.nic	protein_coding	56960775,56949681,56949387,56946442,56942035,56938187	56961050,56950996,56949434,56946511,56942123,56939154	Gene ID= ENSG00000121058.4 TPM= 1.93 Transcript Type= NA
chr17	56978105	57006763	56978105	57006763	+	ENST00000262288.7@SCPEP1	ENST00000262288.7	protein_coding	56978105,56981082,56985378,56987695,56988216,56991099,56994981,56995507,56996962,56998385,57000855,57002018,57006173	56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56997055,56998498,57000992,57002181,57006763	Gene ID= ENSG00000121064.12 TPM= 27.99 Transcript Type= protein_coding
chr17	57085278	57121244	57085278	57121244	+	transcript4507.chr17.nnic@AKAP1	transcript4507.chr17.nnic	protein_coding	57085278,57105441,57107072,57110025,57111798,57112491,57114459,57116111,57116860,57118381,57118982,57120250	57085398,57105768,57107178,57110158,57111924,57112618,57114636,57116261,57116927,57118454,57119044,57121244	Gene ID= ENSG00000121057.12 TPM= 7.72 Transcript Type= NA
chr17	57085277	57120597	57085277	57120597	+	transcript4513.chr17.nnic@AKAP1	transcript4513.chr17.nnic	protein_coding	57085277,57086373,57105441,57110025,57111798,57112491,57114459,57116111,57116860,57118381,57118982,57120250	57085398,57086537,57107178,57110158,57111924,57112618,57114636,57116261,57116927,57118454,57119044,57120597	Gene ID= ENSG00000121057.12 TPM= 40.54 Transcript Type= NA
chr17	57255135	57256363	57255135	57256363	-	transcript4525.chr17.nnic@NA	transcript4525.chr17.nnic	NA	57255135	57256363	Gene ID= novel_gene_chr17_4526 TPM= 3.86 Transcript Type= NA
chr17	57421692	57427408	57421692	57427408	+	transcript4532.chr17.nnic@NA	transcript4532.chr17.nnic	NA	57421692	57427408	Gene ID= novel_gene_chr17_4533 TPM= 1.93 Transcript Type= NA
chr17	57549314	57552391	57549314	57552391	-	transcript4534.chr17.nnic@NA	transcript4534.chr17.nnic	NA	57549314	57552391	Gene ID= novel_gene_chr17_4535 TPM= 2.9 Transcript Type= NA
chr17	57682585	57684607	57682585	57684607	+	transcript4537.chr17.nnic@NA	transcript4537.chr17.nnic	NA	57682585	57684607	Gene ID= novel_gene_chr17_4538 TPM= 4.34 Transcript Type= NA
chr17	57839486	57851804	57839486	57851804	-	transcript4542.chr17.nnic@MRPS23	transcript4542.chr17.nnic	protein_coding	57851752,57849240,57841183,57840926,57839486	57851804,57849410,57841260,57841052,57839935	Gene ID= ENSG00000181610.12 TPM= 1.93 Transcript Type= NA
chr17	57861604	57955414	57861604	57955414	-	transcript4547.chr17.nic@CUEDC1	transcript4547.chr17.nic	protein_coding	57955225,57885646,57885229,57879611,57873591,57872663,57871286,57869122,57868150,57867357,57866474,57861604	57955414,57885879,57885441,57879738,57873717,57872855,57871369,57869193,57868243,57867415,57866544,57863285	Gene ID= ENSG00000180891.12 TPM= 3.38 Transcript Type= NA
chr17	57861243	57955323	57861243	57955323	-	ENST00000577830.5@CUEDC1	ENST00000577830.5	protein_coding	57955225,57885229,57879611,57873591,57872663,57871286,57869122,57868150,57867357,57866474,57861243	57955323,57885879,57879738,57873717,57872855,57871369,57869193,57868243,57867415,57866544,57863285	Gene ID= ENSG00000180891.12 TPM= 7.24 Transcript Type= protein_coding
chr17	57952224	57955341	57952224	57955341	-	transcript4562.chr17.nnic@NA	transcript4562.chr17.nnic	NA	57952224	57955341	Gene ID= novel_gene_chr17_4563 TPM= 1.93 Transcript Type= NA
chr17	57973759	57988433	57973759	57988433	-	transcript4564.chr17.nnic@VEZF1	transcript4564.chr17.nnic	protein_coding	57988079,57985254,57982699,57981873,57980603,57979152,57973759	57988433,57985465,57983393,57981936,57980786,57979313,57974900	Gene ID= ENSG00000136451.8 TPM= 2.25 Transcript Type= NA
chr17	57973759	57988386	57973759	57988386	-	transcript4571.chr17.nic@VEZF1	transcript4571.chr17.nic	protein_coding	57988079,57982699,57981873,57980603,57979152,57973759	57988386,57983393,57981936,57980804,57979313,57974900	Gene ID= ENSG00000136451.8 TPM= 7.08 Transcript Type= NA
chr17	57971547	57982864	57971547	57982864	-	ENST00000258963.7@VEZF1	ENST00000258963.7	protein_coding	57982699,57981873,57980603,57979152,57971547	57982864,57981936,57980804,57979313,57974900	Gene ID= ENSG00000136451.8 TPM= 9.65 Transcript Type= protein_coding
chr17	57973759	57988152	57973759	57988152	-	ENST00000581208.1@VEZF1	ENST00000581208.1	protein_coding	57988079,57982699,57981873,57980603,57979152,57973759	57988152,57983393,57981936,57980786,57979313,57974900	Gene ID= ENSG00000136451.8 TPM= 16.73 Transcript Type= protein_coding
chr17	57986324	57988220	57986324	57988220	-	transcript4587.chr17.nnic@NA	transcript4587.chr17.nnic	NA	57986324	57988220	Gene ID= novel_gene_chr17_4588 TPM= 2.9 Transcript Type= NA
chr17	58003496	58007260	58003496	58007260	-	transcript4573.chr17.nic@SRSF1	transcript4573.chr17.nic	protein_coding	58006944,58006343,58005801,58005414,58004923,58003496	58007260,58006527,58005973,58005600,58005041,58004001	Gene ID= ENSG00000136450.12 TPM= 6.76 Transcript Type= NA
chr17	58003496	58007246	58003496	58007246	-	transcript4576.chr17.nnic@SRSF1	transcript4576.chr17.nnic	protein_coding	58006944,58006343,58005801,58004923,58003496	58007246,58006527,58005973,58005041,58004001	Gene ID= ENSG00000136450.12 TPM= 5.79 Transcript Type= NA
chr17	58003496	58007258	58003496	58007258	-	transcript4577.chr17.nic@SRSF1	transcript4577.chr17.nic	protein_coding	58006944,58006343,58005801,58004923,58003496	58007258,58006527,58005973,58005600,58004001	Gene ID= ENSG00000136450.12 TPM= 7.72 Transcript Type= NA
chr17	58003360	58007261	58003360	58007261	-	ENST00000582730.6@SRSF1	ENST00000582730.6	protein_coding	58006944,58006343,58003360	58007261,58006527,58005973	Gene ID= ENSG00000136450.12 TPM= 4.83 Transcript Type= protein_coding
chr17	58083415	58095536	58083415	58095536	+	ENST00000579991.2@DYNLL2	ENST00000579991.2	protein_coding	58083415,58087082,58089142	58083683,58087222,58095536	Gene ID= ENSG00000264364.2 TPM= 2.9 Transcript Type= protein_coding
chr17	58090764	58091222	58090764	58091222	+	transcript4592.chr17.nnic@NA	transcript4592.chr17.nnic	NA	58090764	58091222	Gene ID= novel_gene_chr17_4593 TPM= 17.38 Transcript Type= NA
chr17	58205437	58219253	58205437	58219253	-	transcript4594.chr17.nnic@MKS1	transcript4594.chr17.nnic	protein_coding	58219151,58218620,58216666,58216088,58215491,58214741,58214259,58213765,58212982,58212378,58210980,58210659,58208513,58208105,58207894,58207085,58206465,58206283,58205437	58219253,58218729,58216736,58216243,58215507,58214838,58214387,58213869,58213090,58212434,58211022,58210724,58208583,58208174,58208001,58207218,58206547,58206380,58206170	Gene ID= ENSG00000011143.16 TPM= 1.93 Transcript Type= NA
chr17	58205437	58219305	58205437	58219305	-	ENST00000393119.6@MKS1	ENST00000393119.6	protein_coding	58219151,58218620,58216666,58216088,58214741,58214259,58213765,58212982,58212378,58210980,58210659,58208513,58208105,58207894,58207085,58206465,58206283,58205437	58219305,58218729,58216736,58216243,58214838,58214387,58213869,58213090,58212434,58211022,58210724,58208583,58208174,58208001,58207218,58206547,58206380,58206170	Gene ID= ENSG00000011143.16 TPM= 5.79 Transcript Type= protein_coding
chr17	58205437	58219253	58205437	58219253	-	transcript4597.chr17.nnic@MKS1	transcript4597.chr17.nnic	protein_coding	58219151,58218620,58216666,58216088,58214741,58213765,58212982,58212378,58210980,58210659,58208513,58208105,58207894,58207085,58206465,58206283,58205437	58219253,58218729,58216736,58216243,58214838,58213869,58213090,58212434,58211022,58210724,58208583,58208174,58208001,58207218,58206547,58206380,58206170	Gene ID= ENSG00000011143.16 TPM= 1.93 Transcript Type= NA
chr17	58345178	58352202	58345178	58352202	-	ENST00000225504.7@SUPT4H1	ENST00000225504.7	protein_coding	58352067,58351402,58347529,58347188,58345178	58352202,58351508,58347584,58347241,58346313	Gene ID= ENSG00000213246.6 TPM= 6.76 Transcript Type= protein_coding
chr17	58345247	58352423	58345247	58352423	-	ENST00000577396.5@SUPT4H1	ENST00000577396.5	protein_coding	58352065,58351402,58347529,58347188,58345247	58352423,58351508,58347584,58347241,58346313	Gene ID= ENSG00000213246.6 TPM= 4.83 Transcript Type= protein_coding
chr17	58489537	58517905	58489537	58517905	-	ENST00000323456.9@MTMR4	ENST00000323456.9	protein_coding	58517817,58516580,58512852,58512390,58511429,58508681,58508468,58508161,58507123,58506743,58505472,58504779,58504303,58504050,58503744,58494932,58492842,58492511,58489537	58517905,58516618,58512941,58512506,58511511,58508841,58508564,58508274,58507319,58506871,58505583,58504974,58504488,58504220,58503898,58496330,58492952,58492599,58491840	Gene ID= ENSG00000108389.9 TPM= 27.99 Transcript Type= protein_coding
chr17	58692573	58735611	58692573	58735611	+	ENST00000337432.8@RAD51C	ENST00000337432.8	protein_coding	58692573,58694931,58696693,58703196,58709859,58720746,58724040,58732484,58734118	58692788,58695189,58696859,58703329,58709990,58720812,58724100,58732544,58735611	Gene ID= ENSG00000108384.14 TPM= 3.86 Transcript Type= protein_coding
chr17	58982651	59106921	58982651	59106921	-	ENST00000393066.7@TRIM37	ENST00000393066.7	protein_coding	59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58999381,58982651	59106921,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001714,58999459,58982921	Gene ID= ENSG00000108395.13 TPM= 1.61 Transcript Type= protein_coding
chr17	58998202	59106758	58998202	59106758	-	transcript4629.chr17.nic@TRIM37	transcript4629.chr17.nic	protein_coding	59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58998202	59106758,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001741,58999459	Gene ID= ENSG00000108395.13 TPM= 4.51 Transcript Type= NA
chr17	58998202	59027902	58998202	59027902	-	transcript4637.chr17.nnic@TRIM37	transcript4637.chr17.nnic	protein_coding	59027804,59017296,59015610,59012328,59001598,58998202	59027902,59017424,59015799,59012446,59001714,58999459	Gene ID= ENSG00000108395.13 TPM= 2.41 Transcript Type= NA
chr17	58998202	59106721	58998202	59106721	-	ENST00000262294.11@TRIM37	ENST00000262294.11	protein_coding	59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58998202	59106721,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001714,58999459	Gene ID= ENSG00000108395.13 TPM= 19.79 Transcript Type= protein_coding
chr17	59109951	59155269	59109951	59155269	-	ENST00000330137.11@SKA2	ENST00000330137.11	protein_coding	59155131,59131281,59119319,59109951	59155269,59131367,59119495,59112345	Gene ID= ENSG00000182628.12 TPM= 3.86 Transcript Type= protein_coding
chr17	59210010	59215247	59210010	59215247	+	ENST00000300917.9@SMG8	ENST00000300917.9	protein_coding	59210010,59212341,59212729,59214805	59211810,59212486,59213601,59215247	Gene ID= ENSG00000167447.12 TPM= 30.89 Transcript Type= protein_coding
chr17	59331702	59401729	59331702	59401729	+	ENST00000312655.8@YPEL2	ENST00000312655.8	protein_coding	59331702,59353215,59388327,59389360,59397101	59331824,59353526,59388370,59389468,59401729	Gene ID= ENSG00000175155.8 TPM= 8.69 Transcript Type= protein_coding
chr17	59331721	59356303	59331721	59356303	+	ENST00000582192.1@YPEL2	ENST00000582192.1	protein_coding	59331721,59353215	59331824,59356303	Gene ID= ENSG00000175155.8 TPM= 2.9 Transcript Type= retained_intron
chr17	59565525	59608345	59565525	59608345	+	ENST00000251241.8@DHX40	ENST00000251241.8	protein_coding	59565525,59566627,59570518,59573116,59573740,59574188,59575340,59577266,59579472,59579697,59586153,59587896,59598737,59599375,59602522,59605115,59605446,59607033	59565783,59566794,59570663,59573235,59573967,59574254,59575471,59577365,59579558,59579879,59586233,59588053,59598851,59599483,59602616,59605184,59605674,59608345	Gene ID= ENSG00000108406.9 TPM= 40.3 Transcript Type= protein_coding
chr17	59565610	59608345	59565610	59608345	+	transcript4661.chr17.nnic@DHX40	transcript4661.chr17.nnic	protein_coding	59565610,59566109,59570518,59573116,59573740,59574188,59575340,59577266,59579472,59579697,59586153,59587896,59598737,59599375,59602522,59605115,59605446,59607033	59565783,59566328,59570663,59573235,59573967,59574254,59575471,59577365,59579558,59579879,59586233,59588053,59598851,59599483,59602616,59605184,59605674,59608345	Gene ID= ENSG00000108406.9 TPM= 3.62 Transcript Type= NA
chr17	59565610	59608345	59565610	59608345	+	transcript4666.chr17.nic@DHX40	transcript4666.chr17.nic	protein_coding	59565610,59570518,59573116,59573740,59574188,59575340,59577266,59579472,59579697,59586153,59587896,59598737,59599375,59602522,59605115,59605446,59607033	59565783,59570663,59573235,59573967,59574254,59575471,59577365,59579558,59579879,59586233,59588053,59598851,59599483,59602616,59605184,59605674,59608345	Gene ID= ENSG00000108406.9 TPM= 3.62 Transcript Type= NA
chr17	59565617	59608345	59565617	59608345	+	transcript4668.chr17.nnic@DHX40	transcript4668.chr17.nnic	protein_coding	59565617,59573116,59573740,59574188,59575340,59577266,59579472,59579697,59586153,59587896,59598737,59599375,59602522,59605115,59605446,59607033	59565783,59573235,59573967,59574254,59575471,59577365,59579558,59579879,59586233,59588053,59598851,59599483,59602616,59605184,59605674,59608345	Gene ID= ENSG00000108406.9 TPM= 2.9 Transcript Type= NA
chr17	59618553	59619714	59618553	59619714	-	ENST00000611877.1@AC091271.1	ENST00000611877.1	lincRNA	59618553	59619714	Gene ID= ENSG00000273702.1 TPM= 4.83 Transcript Type= lincRNA
chr17	59619678	59695112	59619678	59695112	+	transcript4674.chr17.nic@CLTC	transcript4674.chr17.nic	protein_coding	59619678,59644276,59647398,59648240,59651203,59655854,59660391,59661443,59663842,59664787,59666103,59666480,59666797,59668777,59673647,59674701,59676954,59679397,59680912,59681295,59681647,59682271,59682629,59682907,59683095,59683387,59683625,59683875,59685056,59685587,59687001,59690636,59693728	59620173,59644483,59647666,59648401,59651316,59656027,59660588,59661643,59663994,59664909,59666240,59666644,59666977,59668940,59673772,59674843,59677188,59679519,59681057,59681478,59681839,59682428,59682793,59683014,59683262,59683536,59683756,59683985,59685226,59685808,59687021,59690711,59695112	Gene ID= ENSG00000141367.11 TPM= 17.13 Transcript Type= NA
chr17	59619678	59690826	59619678	59690826	+	transcript4676.chr17.nic@CLTC	transcript4676.chr17.nic	protein_coding	59619678,59644276,59647398,59648240,59651203,59655854,59660391,59661443,59663842,59664787,59666103,59666480,59666797,59668777,59673647,59674701,59676954,59679397,59680912,59681295,59681647,59682271,59682629,59682907,59683095,59683387,59683625,59683875,59685056,59685587,59687001,59690636	59620173,59644483,59647666,59648401,59651316,59656027,59660588,59661643,59663994,59664909,59666240,59666644,59666977,59668940,59673772,59674843,59677188,59679519,59681057,59681478,59681839,59682428,59682793,59683014,59683262,59683536,59683756,59683985,59685226,59685808,59687021,59690826	Gene ID= ENSG00000141367.11 TPM= 12.31 Transcript Type= NA
chr17	59697308	59707626	59697308	59707626	-	ENST00000409433.2@PTRH2	ENST00000409433.2	protein_coding	59707371,59698871,59697308	59707626,59700189,59697978	Gene ID= ENSG00000141378.14 TPM= 3.86 Transcript Type= protein_coding
chr17	59697306	59707598	59697306	59707598	-	ENST00000393038.2@PTRH2	ENST00000393038.2	protein_coding	59707371,59697306	59707598,59697978	Gene ID= ENSG00000141378.14 TPM= 14.48 Transcript Type= protein_coding
chr17	59707465	59841092	59707465	59841092	+	ENST00000262291.8@VMP1	ENST00000262291.8	protein_coding	59707465,59731421,59735338,59737453,59738837,59764971,59773754,59808796,59811670,59817712,59838295,59839768	59707748,59731522,59735473,59737543,59738947,59765138,59773885,59808876,59811786,59817773,59838397,59841092	Gene ID= ENSG00000062716.12 TPM= 59.85 Transcript Type= protein_coding
chr17	59707654	59835896	59707654	59835896	+	transcript4692.chr17.nic@VMP1	transcript4692.chr17.nic	protein_coding	59707654,59731421,59735338,59737453,59738837,59764971,59773754,59808796,59811670,59817712,59834012	59707748,59731522,59735473,59737543,59738947,59765138,59773885,59808876,59811786,59817773,59835896	Gene ID= ENSG00000062716.12 TPM= 1.93 Transcript Type= NA
chr17	59707533	59841092	59707533	59841092	+	transcript4694.chr17.nnic@VMP1	transcript4694.chr17.nnic	protein_coding	59707533,59731421,59735338,59737453,59738837,59764971,59773754,59811670,59817712,59838295,59839768	59707748,59731522,59735473,59737543,59738947,59765138,59773885,59811786,59817773,59838397,59841092	Gene ID= ENSG00000062716.12 TPM= 1.93 Transcript Type= NA
chr17	59707645	59840593	59707645	59840593	+	transcript4695.chr17.nnic@VMP1	transcript4695.chr17.nnic	protein_coding	59707645,59731421,59735338,59737453,59738837,59773754,59808796,59811670,59817712,59838295,59839768	59707748,59731522,59735473,59737543,59738947,59773885,59808876,59811786,59817773,59838397,59840593	Gene ID= ENSG00000062716.12 TPM= 3.86 Transcript Type= NA
chr17	59707653	59840593	59707653	59840593	+	transcript4696.chr17.nnic@VMP1	transcript4696.chr17.nnic	protein_coding	59707653,59731421,59735338,59737453,59764971,59773754,59808796,59811670,59817712,59838295,59839768	59707748,59731522,59735473,59737543,59765138,59773885,59808876,59811786,59817773,59838397,59840593	Gene ID= ENSG00000062716.12 TPM= 1.93 Transcript Type= NA
chr17	59707621	59840593	59707621	59840593	+	transcript4699.chr17.nic@VMP1	transcript4699.chr17.nic	protein_coding	59707621,59731421,59735338,59764971,59773754,59808796,59811670,59817712,59838295,59839768	59707748,59731522,59735473,59765138,59773885,59808876,59811786,59817773,59838397,59840593	Gene ID= ENSG00000062716.12 TPM= 1.93 Transcript Type= NA
chr17	59834628	59837401	59834628	59837401	-	transcript4706.chr17.nnic@NA	transcript4706.chr17.nnic	NA	59834628	59837401	Gene ID= novel_gene_chr17_4707 TPM= 1.93 Transcript Type= NA
chr17	59893116	59950421	59893116	59950421	+	transcript4708.chr17.nnic@RPS6KB1	transcript4708.chr17.nnic	protein_coding	59893116,59893796,59910562,59912684,59914635,59926435,59930117,59931622,59934170,59934434,59935193,59936215,59936464,59937578,59940836,59945406,59946551	59893325,59893924,59910611,59912804,59914703,59926582,59930174,59931722,59934260,59934524,59935300,59936277,59936541,59937774,59940943,59945518,59950421	Gene ID= ENSG00000108443.13 TPM= 2.41 Transcript Type= NA
chr17	59893046	59950421	59893046	59950421	+	ENST00000393021.7@RPS6KB1	ENST00000393021.7	protein_coding	59893046,59893796,59910562,59912684,59914635,59926435,59930117,59931622,59934170,59934434,59935193,59936215,59936464,59940836,59945406,59946551	59893325,59893924,59910611,59912804,59914703,59926582,59930174,59931722,59934260,59934524,59935300,59936277,59936541,59940943,59945518,59950421	Gene ID= ENSG00000108443.13 TPM= 1.45 Transcript Type= protein_coding
chr17	59952240	59964719	59952240	59964719	-	ENST00000305783.12@RNFT1	ENST00000305783.12	protein_coding	59964608,59962827,59962540,59960068,59958291,59957224,59956488,59954045,59952240	59964719,59963284,59962616,59960168,59958444,59957382,59956553,59954146,59953111	Gene ID= ENSG00000189050.15 TPM= 1.93 Transcript Type= protein_coding
chr17	59952362	59964734	59952362	59964734	-	ENST00000482446.5@RNFT1	ENST00000482446.5	protein_coding	59964608,59962827,59962540,59958291,59957224,59956488,59954045,59952362	59964734,59963284,59962616,59958444,59957382,59956553,59954146,59953111	Gene ID= ENSG00000189050.15 TPM= 7.72 Transcript Type= nonsense_mediated_decay
chr17	59952396	59964761	59952396	59964761	-	ENST00000466544.5@RNFT1	ENST00000466544.5	protein_coding	59964608,59962827,59958291,59957224,59956488,59954045,59952396	59964761,59963284,59958444,59957382,59956553,59954146,59953111	Gene ID= ENSG00000189050.15 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr17	59964832	59973104	59964832	59973104	+	ENST00000593015.5@AC005702.1	ENST00000593015.5	lincRNA	59964832,59966403,59972835	59965188,59966467,59973104	Gene ID= ENSG00000267302.5 TPM= 3.86 Transcript Type= lincRNA
chr17	60043194	60078931	60043194	60078931	-	ENST00000184956.10@HEATR6	ENST00000184956.10	protein_coding	60078696,60076130,60073746,60073164,60072215,60070706,60069711,60067434,60066209,60059890,60059422,60057048,60056115,60055515,60050843,60049580,60048264,60047309,60046025,60043194	60078931,60076237,60073886,60073279,60072329,60070807,60069848,60067732,60066386,60060096,60059521,60057403,60056237,60055601,60050977,60049702,60048388,60047405,60046229,60044134	Gene ID= ENSG00000068097.14 TPM= 2.9 Transcript Type= protein_coding
chr17	60043194	60078931	60043194	60078931	-	transcript4741.chr17.nic@HEATR6	transcript4741.chr17.nic	protein_coding	60078696,60076130,60073164,60072215,60070706,60069711,60067434,60066209,60059890,60059422,60057048,60056115,60055515,60050843,60049580,60048264,60047309,60046025,60043194	60078931,60076237,60073279,60072329,60070807,60069848,60067732,60066386,60060096,60059521,60057403,60056237,60055601,60050977,60049702,60048388,60047405,60046229,60044134	Gene ID= ENSG00000068097.14 TPM= 2.9 Transcript Type= NA
chr17	60149936	60159540	60149936	60159540	+	ENST00000300900.8@CA4	ENST00000300900.8	protein_coding	60149936,60155314,60156560,60157427,60157690,60158061,60158283,60159230	60150092,60155367,60156715,60157572,60157788,60158127,60158446,60159540	Gene ID= ENSG00000167434.9 TPM= 6.76 Transcript Type= protein_coding
chr17	60179094	60392134	60179094	60392134	-	ENST00000300896.8@USP32	ENST00000300896.8	protein_coding	60391882,60345481,60301599,60294683,60288523,60271350,60269450,60265976,60265412,60255175,60252381,60236138,60226039,60223411,60222409,60219670,60214620,60213581,60212024,60211376,60211013,60209370,60208654,60208059,60207021,60205447,60198260,60192844,60190563,60185460,60183165,60181324,60180545,60179094	60392134,60345608,60301704,60294801,60288682,60271481,60269557,60266091,60265474,60255258,60252442,60236240,60226231,60223586,60222549,60219787,60214774,60213662,60212098,60211514,60211118,60209543,60208828,60208210,60207132,60205658,60198444,60192930,60190683,60185651,60183453,60181748,60180637,60179428	Gene ID= ENSG00000170832.12 TPM= 12.55 Transcript Type= protein_coding
chr17	60447268	60526242	60447268	60526242	-	transcript4752.chr17.nic@APPBP2	transcript4752.chr17.nic	protein_coding	60525794,60500399,60496413,60494466,60479148,60466291,60464021,60461994,60461810,60460663,60456296,60454302,60451880,60447268	60526242,60500487,60496441,60494617,60479271,60466459,60464110,60462061,60461915,60460787,60456381,60454492,60452045,60447834	Gene ID= ENSG00000062725.9 TPM= 3.86 Transcript Type= NA
chr17	60443149	60526219	60443149	60526219	-	ENST00000083182.7@APPBP2	ENST00000083182.7	protein_coding	60525794,60500399,60494466,60479148,60466291,60464021,60461994,60461810,60460663,60456296,60454302,60451880,60443149	60526219,60500487,60494617,60479271,60466459,60464110,60462061,60461915,60460787,60456381,60454492,60452045,60447834	Gene ID= ENSG00000062725.9 TPM= 1.93 Transcript Type= protein_coding
chr17	60600183	60666280	60600183	60666280	+	ENST00000305921.7@PPM1D	ENST00000305921.7	protein_coding	60600183,60623521,60633853,60647892,60656599,60662995	60600886,60623749,60633977,60648082,60656841,60666280	Gene ID= ENSG00000170836.11 TPM= 1.93 Transcript Type= protein_coding
chr17	60677852	61392831	60677852	61392831	+	ENST00000589222.5@BCAS3	ENST00000589222.5	protein_coding	60677852,60679453,60683982,60689686,60709219,60747198,60808004,60868576,60874662,60889695,60902620,60910532,60924407,60947219,60989971,61015751,61034666,61037889,61040792,61074920,61078333,61084467,61368327,61380506,61388618,61391977	60677914,60679540,60684036,60689761,60709325,60747279,60808076,60868683,60874738,60889771,60902703,60910702,60924500,60947352,60990235,61015901,61034790,61038054,61040892,61075020,61078529,61084564,61368494,61380571,61388708,61392831	Gene ID= ENSG00000141376.22 TPM= 3.86 Transcript Type= protein_coding
chr17	61402420	61409088	61402420	61409088	+	transcript4776.chr17.nic@TBX2	transcript4776.chr17.nic	protein_coding	61402420,61404421,61404606,61405202,61408054	61403207,61404497,61404769,61405836,61409088	Gene ID= ENSG00000121068.13 TPM= 2.9 Transcript Type= NA
chr17	61399896	61409425	61399896	61409425	+	ENST00000240328.3@TBX2	ENST00000240328.3	protein_coding	61399896,61401684,61403061,61404421,61404606,61405202,61408054	61400571,61401951,61403207,61404497,61404769,61405836,61409425	Gene ID= ENSG00000121068.13 TPM= 5.79 Transcript Type= protein_coding
chr17	61942605	62065282	61942605	62065282	-	ENST00000397786.6@MED13	ENST00000397786.6	protein_coding	62065140,62063067,62052537,62035463,62033787,62031444,62029851,62029541,62010550,61995152,61992540,61987007,61985000,61984651,61984171,61982198,61972727,61968035,61966462,61965006,61962752,61961588,61960867,61956339,61955680,61955382,61952965,61950825,61946917,61942605	62065282,62063301,62052705,62035608,62033984,62031638,62030013,62029651,62011233,61995365,61992621,61987128,61985090,61984865,61984367,61983114,61972888,61968258,61966651,61965468,61962971,61961779,61961090,61956481,61955838,61955567,61953113,61950998,61947017,61946600	Gene ID= ENSG00000108510.9 TPM= 15.44 Transcript Type= protein_coding
chr17	62006293	62008341	62006293	62008341	+	transcript4783.chr17.nnic@NA	transcript4783.chr17.nnic	NA	62006293	62008341	Gene ID= novel_gene_chr17_4784 TPM= 33.79 Transcript Type= NA
chr17	62049056	62050510	62049056	62050510	+	transcript4781.chr17.nnic@NA	transcript4781.chr17.nnic	NA	62049056	62050510	Gene ID= novel_gene_chr17_4782 TPM= 2.9 Transcript Type= NA
chr17	62136972	62140639	62136972	62140639	-	ENST00000578759.1@AC008158.1	ENST00000578759.1	processed_pseudogene	62136972	62140639	Gene ID= ENSG00000266066.1 TPM= 1.93 Transcript Type= processed_pseudogene
chr17	62423867	62450093	62423867	62450093	+	ENST00000311506.9@METTL2A	ENST00000311506.9	protein_coding	62423867,62424219,62426299,62427788,62435232,62440617,62444837,62447701,62448575	62424012,62424310,62426654,62427837,62435292,62440756,62444943,62447766,62450093	Gene ID= ENSG00000087995.15 TPM= 9.65 Transcript Type= protein_coding
chr17	62423875	62448914	62423875	62448914	+	ENST00000333483.14@METTL2A	ENST00000333483.14	protein_coding	62423875,62426299,62427788,62435232,62440617,62444837,62447701,62448575	62424310,62426654,62427837,62435292,62440756,62444943,62447766,62448914	Gene ID= ENSG00000087995.15 TPM= 4.83 Transcript Type= retained_intron
chr17	62478633	62613490	62478633	62613490	+	transcript4798.chr17.nic@TLK2	transcript4798.chr17.nic	protein_coding	62478633,62481124,62520773,62522204,62523134,62524236,62536170,62552302,62553663,62560016,62565001,62573215,62576709,62578477,62580111,62586135,62596585,62600651,62602042,62606130,62608041,62612392	62479290,62481206,62520844,62522273,62523177,62524331,62536337,62552397,62553755,62560126,62565137,62573367,62576775,62578574,62580192,62586226,62596674,62600820,62602180,62606241,62608148,62613490	Gene ID= ENSG00000146872.17 TPM= 8.21 Transcript Type= NA
chr17	62478976	62613016	62478976	62613016	+	transcript4804.chr17.nic@TLK2	transcript4804.chr17.nic	protein_coding	62478976,62481124,62520773,62522204,62523134,62536170,62552302,62553663,62560016,62565001,62573215,62576709,62578477,62580111,62586135,62596585,62600651,62602042,62606130,62608041,62612392	62479290,62481206,62520844,62522273,62523177,62536337,62552397,62553755,62560126,62565137,62573367,62576775,62578574,62580192,62586226,62596674,62600820,62602180,62606241,62608148,62613016	Gene ID= ENSG00000146872.17 TPM= 1.93 Transcript Type= NA
chr17	62479025	62613490	62479025	62613490	+	ENST00000346027.9@TLK2	ENST00000346027.9	protein_coding	62479025,62481121,62520773,62522204,62523134,62524236,62536170,62552302,62553663,62560016,62565001,62573215,62576709,62578477,62580111,62586135,62596585,62600651,62602042,62606130,62608041,62612392	62479290,62481206,62520844,62522273,62523177,62524331,62536337,62552397,62553755,62560126,62565137,62573367,62576775,62578574,62580192,62586226,62596674,62600820,62602180,62606241,62608148,62613490	Gene ID= ENSG00000146872.17 TPM= 10.14 Transcript Type= protein_coding
chr17	62627401	62693597	62627401	62693597	+	ENST00000303375.9@MRC2	ENST00000303375.9	protein_coding	62627401,62664548,62666094,62666455,62666757,62667390,62671649,62671998,62674063,62675790,62676383,62677269,62678504,62679800,62680170,62680418,62680800,62681062,62681837,62682235,62688289,62688501,62688852,62689522,62689894,62690156,62690642,62690949,62692112,62692231	62627920,62664949,62666267,62666619,62666870,62667533,62671837,62672152,62674170,62675905,62676531,62677486,62678646,62679902,62680308,62680453,62680960,62681129,62681937,62682377,62688403,62688664,62688960,62689760,62690062,62690305,62690761,62691128,62692138,62693597	Gene ID= ENSG00000011028.13 TPM= 10.62 Transcript Type= protein_coding
chr17	63477071	63498380	63477071	63498380	+	ENST00000290866.9@ACE	ENST00000290866.9	protein_coding	63477071,63477931,63479007,63479769,63480337,63481091,63481566,63482466,63483029,63483460,63483849,63484330,63485236,63486557,63486986,63488648,63488941,63490954,63491209,63493436,63493922,63494372,63496394,63496798,63497137	63477343,63478098,63479100,63479912,63480528,63481188,63481738,63482689,63483173,63483558,63483971,63484541,63485372,63486715,63487073,63488791,63489132,63491051,63491381,63493659,63494066,63494470,63496516,63496985,63498380	Gene ID= ENSG00000159640.15 TPM= 2.9 Transcript Type= protein_coding
chr17	63550461	63594266	63550461	63594266	+	ENST00000614556.4@DCAF7	ENST00000614556.4	protein_coding	63550461,63578470,63579337,63579825,63583502,63585211,63589000	63550815,63578628,63579448,63579943,63583711,63585328,63594266	Gene ID= ENSG00000136485.14 TPM= 16.41 Transcript Type= protein_coding
chr17	63550482	63594266	63550482	63594266	+	ENST00000431926.5@DCAF7	ENST00000431926.5	protein_coding	63550482,63578470,63579337,63579825,63583502,63585211,63589000,63594203	63550815,63578628,63579448,63579943,63583711,63585328,63589237,63594266	Gene ID= ENSG00000136485.14 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr17	63600872	63608365	63600872	63608365	+	ENST00000258975.6@TACO1	ENST00000258975.6	protein_coding	63600872,63604534,63606313,63607287,63607802	63601363,63604640,63606440,63607464,63608365	Gene ID= ENSG00000136463.7 TPM= 74.33 Transcript Type= protein_coding
chr17	63622383	63695107	63622383	63695107	+	transcript4844.chr17.nnic@MAP3K3	transcript4844.chr17.nnic	protein_coding	63622383,63632681,63646034,63652557,63657794,63666940,63681766,63685517,63688527,63688789,63689544,63690264,63691102,63691733,63693549	63622763,63632802,63646074,63652656,63657907,63667060,63681899,63685590,63688594,63688881,63689735,63690412,63691233,63691862,63695107	Gene ID= ENSG00000198909.7 TPM= 3.86 Transcript Type= NA
chr17	63622440	63695105	63622440	63695105	+	ENST00000361733.7@MAP3K3	ENST00000361733.7	protein_coding	63622440,63632681,63646034,63652557,63657794,63666940,63681766,63685517,63688527,63688789,63689544,63690264,63691102,63691733,63692242,63693549	63622763,63632802,63646074,63652656,63657907,63667060,63681899,63685590,63688594,63688881,63689735,63690412,63691233,63691862,63692419,63695105	Gene ID= ENSG00000198909.7 TPM= 28.96 Transcript Type= protein_coding
chr17	63697816	63699451	63697816	63699451	-	transcript4847.chr17.nic@LIMD2	transcript4847.chr17.nic	protein_coding	63699257,63699028,63698799,63697816	63699451,63699069,63698938,63698711	Gene ID= ENSG00000136490.8 TPM= 1.93 Transcript Type= NA
chr17	63702819	63741875	63702819	63741875	-	ENST00000336174.11@STRADA	ENST00000336174.11	protein_coding	63741741,63728334,63726638,63723298,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63704005,63702819	63741875,63728413,63726695,63723326,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047,63703751	Gene ID= ENSG00000266173.6 TPM= 9.65 Transcript Type= protein_coding
chr17	63745250	63773775	63745250	63773775	-	ENST00000225726.9@CCDC47	ENST00000225726.9	protein_coding	63773412,63765912,63764740,63764016,63761230,63760914,63756469,63756240,63754433,63752741,63752320,63751940,63745250	63773775,63766194,63764847,63764190,63761351,63760979,63756570,63756350,63754518,63752799,63752429,63752107,63746961	Gene ID= ENSG00000108588.13 TPM= 6.76 Transcript Type= protein_coding
chr17	63746403	63773570	63746403	63773570	-	ENST00000403162.7@CCDC47	ENST00000403162.7	protein_coding	63773412,63772777,63765912,63764740,63764016,63761230,63760914,63756469,63756240,63754433,63752741,63752320,63751940,63746403	63773570,63772863,63766194,63764847,63764190,63761351,63760979,63756570,63756350,63754518,63752799,63752429,63752107,63746961	Gene ID= ENSG00000108588.13 TPM= 7.72 Transcript Type= protein_coding
chr17	63751770	63773570	63751770	63773570	-	ENST00000582252.1@CCDC47	ENST00000582252.1	protein_coding	63773412,63765912,63764740,63764016,63761230,63760914,63756469,63756240,63754433,63752741,63752320,63751770	63773570,63766194,63764847,63764190,63761351,63760979,63756570,63756350,63754518,63752799,63752429,63752107	Gene ID= ENSG00000108588.13 TPM= 1.93 Transcript Type= protein_coding
chr17	63773863	63819317	63773863	63819317	+	ENST00000578681.5@DDX42	ENST00000578681.5	protein_coding	63773863,63775108,63787034,63792412,63798038,63799589,63800468,63805071,63806535,63807724,63808820,63809560,63810513,63811076,63811932,63813228,63815563,63816868,63817694	63774376,63775178,63787270,63792562,63798099,63799625,63800617,63805175,63806654,63807900,63808948,63809659,63810560,63811173,63812208,63813454,63815673,63816966,63819317	Gene ID= ENSG00000198231.12 TPM= 27.03 Transcript Type= protein_coding
chr17	63819433	63827671	63819433	63827671	-	ENST00000427159.6@FTSJ3	ENST00000427159.6	protein_coding	63827052,63826836,63826567,63826258,63826056,63825536,63825242,63825048,63824825,63824637,63824331,63824084,63823817,63821984,63821723,63821354,63821030,63820839,63820255,63820079,63819433	63827671,63826928,63826672,63826304,63826135,63825635,63825436,63825163,63824929,63824737,63824411,63824239,63823952,63822168,63821843,63821643,63821115,63820938,63820438,63820173,63819994	Gene ID= ENSG00000108592.16 TPM= 31.37 Transcript Type= protein_coding
chr17	63819433	63827064	63819433	63827064	-	transcript4873.chr17.nic@FTSJ3	transcript4873.chr17.nic	protein_coding	63826836,63826567,63826258,63826056,63825536,63825242,63825048,63824825,63824637,63824331,63824084,63823817,63821984,63821723,63821354,63821030,63820839,63820255,63820079,63819433	63827064,63826672,63826304,63826135,63825635,63825436,63825163,63824929,63824737,63824411,63824239,63823952,63822168,63821843,63821643,63821115,63820938,63820438,63820173,63819994	Gene ID= ENSG00000108592.16 TPM= 13.03 Transcript Type= NA
chr17	63827183	63832019	63827183	63832019	+	ENST00000310144.10@PSMC5	ENST00000310144.10	protein_coding	63827183,63828138,63829494,63829852,63830133,63830271,63830809,63831036,63831327,63831506,63831724,63831916	63827514,63828209,63829563,63829949,63830189,63830501,63830935,63831226,63831425,63831616,63831810,63832019	Gene ID= ENSG00000087191.12 TPM= 442.6 Transcript Type= protein_coding
chr17	63832084	63842940	63832084	63842940	-	ENST00000448276.6@SMARCD2	ENST00000448276.6	protein_coding	63842459,63837441,63837195,63836922,63835412,63834705,63834474,63834167,63833909,63833587,63833298,63833069,63832084	63842940,63837625,63837237,63837044,63835567,63834800,63834575,63834328,63834006,63833722,63833420,63833170,63832991	Gene ID= ENSG00000108604.15 TPM= 24.13 Transcript Type= protein_coding
chr17	63928740	63932354	63928740	63932354	-	ENST00000006750.7@CD79B	ENST00000006750.7	protein_coding	63932195,63931335,63930074,63929770,63929434,63928740	63932354,63931385,63930385,63929888,63929475,63929324	Gene ID= ENSG00000007312.12 TPM= 1.93 Transcript Type= protein_coding
chr17	63944320	63961537	63944320	63961537	-	transcript4904.chr17.nic@SCN4A	transcript4904.chr17.nic	protein_coding	63961193,63959265,63957162,63951424,63949393,63948611,63947890,63947045,63945360,63945007,63944320	63961537,63959438,63957518,63951900,63949528,63948765,63948063,63947167,63945638,63945060,63944810	Gene ID= ENSG00000007314.12 TPM= 5.79 Transcript Type= NA
chr17	63938554	63972918	63938554	63972918	-	ENST00000435607.3@SCN4A	ENST00000435607.3	protein_coding	63972569,63972352,63972136,63971722,63971162,63968023,63966481,63966102,63964468,63963672,63961193,63959265,63957162,63951424,63949393,63948611,63947890,63947045,63945360,63945007,63944673,63943746,63942826,63938554	63972918,63972470,63972225,63971850,63971253,63968355,63966544,63966243,63964677,63963825,63961431,63959438,63957518,63951900,63949528,63948765,63948063,63947167,63945638,63945060,63944810,63943850,63943096,63941993	Gene ID= ENSG00000007314.12 TPM= 189.2 Transcript Type= protein_coding
chr17	63944321	63946084	63944321	63946084	-	transcript4916.chr17.nnic@NA	transcript4916.chr17.nnic	NA	63944321	63946084	Gene ID= novel_gene_chr17_4917 TPM= 1.93 Transcript Type= NA
chr17	63969653	63970571	63969653	63970571	-	transcript4912.chr17.nnic@NA	transcript4912.chr17.nnic	NA	63969653	63970571	Gene ID= novel_gene_chr17_4913 TPM= 2.9 Transcript Type= NA
chr17	64002595	64006932	64002595	64006932	-	ENST00000449662.6@ICAM2	ENST00000449662.6	protein_coding	64006631,64005107,64003644,64002595	64006932,64005373,64003964,64002925	Gene ID= ENSG00000108622.10 TPM= 14 Transcript Type= protein_coding
chr17	64002595	64004997	64002595	64004997	-	transcript4921.chr17.nic@ICAM2	transcript4921.chr17.nic	protein_coding	64003644,64002595	64004997,64002925	Gene ID= ENSG00000108622.10 TPM= 1.93 Transcript Type= NA
chr17	64002596	64020602	64002596	64020602	-	ENST00000579788.5@ICAM2	ENST00000579788.5	protein_coding	64020523,64006631,64005107,64003644,64002596	64020602,64006735,64005373,64003964,64002925	Gene ID= ENSG00000108622.10 TPM= 13.03 Transcript Type= protein_coding
chr17	64128805	64130184	64128805	64130184	-	transcript4924.chr17.nnic@NA	transcript4924.chr17.nnic	NA	64128805	64130184	Gene ID= novel_gene_chr17_4925 TPM= 5.79 Transcript Type= NA
chr17	64145968	64146307	64145968	64146307	+	transcript4928.chr17.nnic@NA	transcript4928.chr17.nnic	NA	64145968	64146307	Gene ID= novel_gene_chr17_4929 TPM= 12.55 Transcript Type= NA
chr17	64145970	64146309	64145970	64146309	+	ENST00000580828.1@SNHG25	ENST00000580828.1	lincRNA	64145970,64146230	64145995,64146309	Gene ID= ENSG00000266402.3 TPM= 27.03 Transcript Type= lincRNA
chr17	64145970	64146476	64145970	64146476	+	ENST00000582965.1@SNHG25	ENST00000582965.1	lincRNA	64145970,64146230	64146000,64146476	Gene ID= ENSG00000266402.3 TPM= 15.44 Transcript Type= lincRNA
chr17	64199601	64202221	64199601	64202221	-	transcript4936.chr17.nnic@NA	transcript4936.chr17.nnic	NA	64199601	64202221	Gene ID= novel_gene_chr17_4937 TPM= 1.93 Transcript Type= NA
chr17	64322503	64390863	64322503	64390863	-	transcript4938.chr17.nnic@PECAM1	transcript4938.chr17.nnic	protein_coding	64390602,64390489,64377824,64375051,64369750,64363149,64360140,64356111,64354933,64353491,64352390,64350380,64348260,64347258,64341634,64329700,64322503	64390863,64390515,64378117,64375356,64370025,64363397,64360415,64356398,64355040,64353518,64352463,64350433,64348322,64347353,64341690,64329722,64323845	Gene ID= ENSG00000261371.5 TPM= 15.44 Transcript Type= NA
chr17	64319415	64390878	64319415	64390878	-	ENST00000563924.5@PECAM1	ENST00000563924.5	protein_coding	64390602,64390489,64377824,64375051,64369750,64363149,64360140,64356111,64354933,64353491,64352390,64350380,64348260,64341634,64329700,64319415	64390878,64390515,64378117,64375356,64370025,64363397,64360415,64356398,64355040,64353518,64352463,64350433,64348322,64341690,64329722,64323845	Gene ID= ENSG00000261371.5 TPM= 14.48 Transcript Type= protein_coding
chr17	64477785	64497036	64477785	64497036	-	ENST00000539111.6@POLG2	ENST00000539111.6	protein_coding	64496407,64492895,64492667,64490796,64485728,64482919,64480289,64477785	64497036,64493021,64492772,64490969,64485868,64482999,64480389,64477988	Gene ID= ENSG00000256525.6 TPM= 9.65 Transcript Type= protein_coding
chr17	64499616	64506521	64499616	64506521	-	ENST00000225792.9@DDX5	ENST00000225792.9	protein_coding	64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64502010,64500549,64499616	64506521,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069,64500773,64500326	Gene ID= ENSG00000108654.13 TPM= 259.4 Transcript Type= protein_coding
chr17	64499624	64506339	64499624	64506339	-	transcript4974.chr17.nic@DDX5	transcript4974.chr17.nic	protein_coding	64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64499624	64506339,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069	Gene ID= ENSG00000108654.13 TPM= 13.15 Transcript Type= NA
chr17	64499616	64506289	64499616	64506289	-	ENST00000581230.5@DDX5	ENST00000581230.5	protein_coding	64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64500549,64499616	64506289,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069,64500326	Gene ID= ENSG00000108654.13 TPM= 31.74 Transcript Type= retained_intron
chr17	64506588	64537942	64506588	64537942	+	ENST00000556440.6@CEP95	ENST00000556440.6	protein_coding	64506588,64508592,64510173,64514248,64516723,64519321,64521402,64522702,64525770,64526071,64527111,64529288,64530926,64531890,64532839,64533117,64534585,64536602,64537041,64537603	64507116,64508720,64510280,64514358,64516828,64519436,64521527,64522895,64525882,64526200,64527264,64529427,64531018,64532022,64533008,64533191,64534737,64536748,64537112,64537942	Gene ID= ENSG00000258890.6 TPM= 1.28 Transcript Type= protein_coding
chr17	64506733	64537946	64506733	64537946	+	transcript4955.chr17.nic@CEP95	transcript4955.chr17.nic	protein_coding	64506733,64508592,64510173,64514248,64519321,64521402,64522702,64525770,64526071,64527111,64529288,64530926,64531890,64532839,64533117,64534585,64536602,64537041,64537603	64507116,64508720,64510280,64514358,64519436,64521527,64522895,64525882,64526200,64527264,64529427,64531018,64532022,64533008,64533191,64534737,64536748,64537112,64537946	Gene ID= ENSG00000258890.6 TPM= 4.18 Transcript Type= NA
chr17	64782719	64837154	64782719	64837154	-	ENST00000582986.5@PLEKHM1P1	ENST00000582986.5	transcribed_unprocessed_pseudogene	64837056,64829161,64822254,64821767,64804830,64800000,64797264,64792349,64787248,64786567,64782719	64837154,64829249,64822393,64822052,64805100,64800917,64797409,64792542,64787311,64786724,64785367	Gene ID= ENSG00000214176.9 TPM= 6.76 Transcript Type= processed_transcript
chr17	65010715	65056839	65010715	65056839	-	ENST00000439174.6@GNA13	ENST00000439174.6	protein_coding	65056311,65053502,65018253,65010715	65056839,65053728,65018303,65014829	Gene ID= ENSG00000120063.9 TPM= 89.77 Transcript Type= protein_coding
chr17	65078233	65100712	65078233	65100712	-	transcript5033.chr17.nnic@NA	transcript5033.chr17.nnic	NA	65100681,65078233	65100712,65078555	Gene ID= novel_gene_chr17_5034 TPM= 1.93 Transcript Type= NA
chr17	65528563	65561647	65528563	65561647	-	ENST00000307078.9@AXIN2	ENST00000307078.9	protein_coding	65561450,65557806,65549520,65541455,65538203,65537324,65536869,65536320,65535626,65533912,65528563	65561647,65558736,65549660,65541557,65538343,65537835,65537063,65536553,65535721,65534079,65530102	Gene ID= ENSG00000168646.12 TPM= 2.9 Transcript Type= protein_coding
chr17	67037662	67040791	67037662	67040791	-	transcript5049.chr17.nnic@NA	transcript5049.chr17.nnic	NA	67037662	67040791	Gene ID= novel_gene_chr17_5050 TPM= 1.93 Transcript Type= NA
chr17	67042395	67044410	67042395	67044410	-	transcript5069.chr17.nnic@NA	transcript5069.chr17.nnic	NA	67042395	67044410	Gene ID= novel_gene_chr17_5070 TPM= 2.9 Transcript Type= NA
chr17	67044590	67056797	67044590	67056797	+	ENST00000226021.4@CACNG1	ENST00000226021.4	protein_coding	67044590,67053996,67055103,67056045	67044889,67054070,67055240,67056797	Gene ID= ENSG00000108878.4 TPM= 387.09 Transcript Type= protein_coding
chr17	67044596	67047213	67044596	67047213	+	transcript5065.chr17.nnic@NA	transcript5065.chr17.nnic	NA	67044596	67047213	Gene ID= novel_gene_chr17_5066 TPM= 39.58 Transcript Type= NA
chr17	67056352	67058016	67056352	67058016	+	transcript5063.chr17.nnic@NA	transcript5063.chr17.nnic	NA	67056352	67058016	Gene ID= novel_gene_chr17_5064 TPM= 9.65 Transcript Type= NA
chr17	67188218	67245201	67188218	67245201	-	transcript5075.chr17.nic@HELZ	transcript5075.chr17.nic	protein_coding	67245148,67243784,67239433,67218595,67215899,67203319,67201129,67195419,67193967,67190157,67189589,67188218	67245201,67243839,67239489,67218822,67215935,67203443,67201185,67195470,67194042,67190355,67189696,67188616	Gene ID= ENSG00000198265.11 TPM= 2.9 Transcript Type= NA
chr17	67167526	67245187	67167526	67245187	-	ENST00000417253.7@HELZ	ENST00000417253.7	protein_coding	67245148,67243784,67239433,67218595,67215899,67203319,67201129,67195419,67193967,67190157,67189589,67188319,67178659,67167526	67245187,67243839,67239489,67218822,67215935,67203443,67201185,67195470,67194042,67190355,67189696,67188616,67178926,67167796	Gene ID= ENSG00000198265.11 TPM= 6.76 Transcript Type= non_stop_decay
chr17	67337917	67366602	67337917	67366602	-	transcript5078.chr17.nnic@PSMD12	transcript5078.chr17.nnic	protein_coding	67366412,67357519,67357303,67350229,67348550,67347336,67347116,67345745,67344606,67342186,67339405,67337917	67366602,67357578,67357431,67350336,67348654,67347485,67347250,67345857,67344780,67342263,67341052,67338621	Gene ID= ENSG00000197170.9 TPM= 10.62 Transcript Type= NA
chr17	67337916	67366627	67337916	67366627	-	ENST00000356126.7@PSMD12	ENST00000356126.7	protein_coding	67366412,67357519,67357303,67350229,67348550,67347336,67347116,67345745,67344606,67342186,67337916	67366627,67357578,67357431,67350336,67348654,67347485,67347250,67345857,67344780,67342263,67341052	Gene ID= ENSG00000197170.9 TPM= 25.1 Transcript Type= protein_coding
chr17	67363711	67366579	67363711	67366579	-	transcript5099.chr17.nnic@NA	transcript5099.chr17.nnic	NA	67363711	67366579	Gene ID= novel_gene_chr17_5100 TPM= 1.93 Transcript Type= NA
chr17	67717910	67744151	67717910	67744151	+	transcript5107.chr17.nnic@NOL11	transcript5107.chr17.nnic	protein_coding	67717910,67719674,67719906,67721378,67722580,67724049,67726460,67734363,67735900,67736666,67737071,67737508,67737847,67738122,67738952,67739516,67743479,67743743	67718088,67719787,67719962,67721526,67722637,67724193,67726648,67734439,67736023,67736754,67737145,67737692,67737972,67738355,67739010,67739608,67743586,67744151	Gene ID= ENSG00000130935.9 TPM= 1.93 Transcript Type= NA
chr17	67825524	67945891	67825524	67945891	+	ENST00000544778.6@BPTF	ENST00000544778.6	protein_coding	67825524,67853940,67866464,67874817,67875556,67891844,67893370,67894034,67903789,67904702,67909582,67910877,67918714,67920015,67922840,67924547,67928355,67929336,67931911,67940439,67944150,67945409	67826337,67854762,67866687,67875020,67875744,67892034,67893725,67894165,67903918,67904840,67909761,67913187,67918838,67920143,67922990,67924589,67928601,67929487,67932019,67940656,67944372,67945891	Gene ID= ENSG00000171634.16 TPM= 1.93 Transcript Type= protein_coding
chr17	67940563	67960377	67940563	67960377	+	ENST00000580465.5@BPTF	ENST00000580465.5	protein_coding	67940563,67944150,67945409,67947726,67948081,67959541	67940656,67944372,67945896,67947808,67948306,67960377	Gene ID= ENSG00000171634.16 TPM= 1.93 Transcript Type= protein_coding
chr17	67991101	67993596	67991101	67993596	-	transcript5120.chr17.nic@C17orf58	transcript5120.chr17.nic	protein_coding	67993044,67991101	67993596,67992103	Gene ID= ENSG00000186665.9 TPM= 4.18 Transcript Type= NA
chr17	67991101	67996431	67991101	67996431	-	ENST00000580729.2@C17orf58	ENST00000580729.2	protein_coding	67996123,67993424,67993044,67991101	67996431,67993984,67993235,67992103	Gene ID= ENSG00000186665.9 TPM= 5.15 Transcript Type= protein_coding
chr17	67991102	67993552	67991102	67993552	-	ENST00000536693.1@C17orf58	ENST00000536693.1	protein_coding	67992901,67991102	67993552,67992103	Gene ID= ENSG00000186665.9 TPM= 2.25 Transcript Type= retained_intron
chr17	68035519	68046842	68035519	68046842	+	ENST00000330459.7@KPNA2	ENST00000330459.7	protein_coding	68035519,68037110,68037358,68040678,68042085,68042905,68043100,68043838,68044321,68045772,68046504	68035840,68037207,68037495,68040766,68042353,68042999,68043363,68044071,68044503,68045921,68046842	Gene ID= ENSG00000182481.8 TPM= 26.06 Transcript Type= protein_coding
chr17	68101696	68115518	68101696	68115518	+	transcript5129.chr17.nnic@LINC00674	transcript5129.chr17.nnic	transcribed_unprocessed_pseudogene	68101696,68102943,68106422,68114422,68115061	68101959,68103058,68106553,68114525,68115518	Gene ID= ENSG00000237854.3 TPM= 1.93 Transcript Type= NA
chr17	68101566	68125908	68101566	68125908	+	transcript5131.chr17.nnic@LINC00674	transcript5131.chr17.nnic	transcribed_unprocessed_pseudogene	68101566,68102943,68114422,68125390,68125585	68101959,68103058,68114525,68125480,68125908	Gene ID= ENSG00000237854.3 TPM= 4.83 Transcript Type= NA
chr17	68101688	68125908	68101688	68125908	+	transcript5133.chr17.nnic@LINC00674	transcript5133.chr17.nnic	transcribed_unprocessed_pseudogene	68101688,68102943,68114422,68125390,68125585	68102056,68103058,68114525,68125480,68125908	Gene ID= ENSG00000237854.3 TPM= 3.86 Transcript Type= NA
chr17	68125603	68129584	68125603	68129584	+	transcript5137.chr17.nnic@NA	transcript5137.chr17.nnic	NA	68125603	68129584	Gene ID= novel_gene_chr17_5138 TPM= 15.44 Transcript Type= NA
chr17	68133201	68135935	68133201	68135935	+	ENST00000622750.1@AC005332.8	ENST00000622750.1	lincRNA	68133201	68135935	Gene ID= ENSG00000277476.1 TPM= 8.69 Transcript Type= lincRNA
chr17	68205489	68207493	68205489	68207493	+	ENST00000614046.1@AC005332.7	ENST00000614046.1	lincRNA	68205489	68207493	Gene ID= ENSG00000274712.1 TPM= 1.93 Transcript Type= lincRNA
chr17	68248043	68257154	68248043	68257154	+	ENST00000392720.6@AMZ2	ENST00000392720.6	protein_coding	68248043,68248640,68250188,68250794,68251050,68254404,68255700,68256814	68248086,68248705,68250470,68250967,68251178,68254567,68255876,68257154	Gene ID= ENSG00000196704.11 TPM= 30.24 Transcript Type= protein_coding
chr17	68248004	68257164	68248004	68257164	+	ENST00000612294.4@AMZ2	ENST00000612294.4	protein_coding	68248004,68248640,68250188,68250794,68251050,68254404,68255700,68256814	68248157,68248705,68250470,68250967,68251178,68254567,68255876,68257164	Gene ID= ENSG00000196704.11 TPM= 6.11 Transcript Type= protein_coding
chr17	68247574	68257156	68247574	68257156	+	ENST00000359904.7@AMZ2	ENST00000359904.7	protein_coding	68247574,68250188,68250794,68251050,68254404,68255700,68256814	68248705,68250470,68250967,68251178,68254567,68255876,68257156	Gene ID= ENSG00000196704.11 TPM= 64.99 Transcript Type= protein_coding
chr17	68247985	68257153	68247985	68257153	+	transcript5157.chr17.nnic@AMZ2	transcript5157.chr17.nnic	protein_coding	68247985,68250188,68250794,68251050,68254404,68255700,68256814	68248705,68250470,68250967,68251387,68254567,68255876,68257153	Gene ID= ENSG00000196704.11 TPM= 5.79 Transcript Type= NA
chr17	68248035	68257139	68248035	68257139	+	ENST00000580753.5@AMZ2	ENST00000580753.5	protein_coding	68248035,68248644,68250188,68250794,68251050,68254404,68255700,68256814	68248058,68248705,68250470,68250967,68251178,68254567,68255876,68257139	Gene ID= ENSG00000196704.11 TPM= 11.58 Transcript Type= protein_coding
chr17	68425371	68457531	68425371	68457531	-	transcript5184.chr17.nic@WIPI1	transcript5184.chr17.nic	protein_coding	68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433468,68429996,68428829,68427135,68425371	68457531,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175	Gene ID= ENSG00000070540.12 TPM= 16.41 Transcript Type= NA
chr17	68421310	68457499	68421310	68457499	-	ENST00000589316.5@WIPI1	ENST00000589316.5	protein_coding	68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433464,68429996,68428829,68427135,68426075,68421310	68457499,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820	Gene ID= ENSG00000070540.12 TPM= 375.51 Transcript Type= nonsense_mediated_decay
chr17	68421282	68457421	68421282	68457421	-	ENST00000262139.9@WIPI1	ENST00000262139.9	protein_coding	68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433468,68429996,68428829,68427135,68426075,68421282	68457421,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820	Gene ID= ENSG00000070540.12 TPM= 14.48 Transcript Type= protein_coding
chr17	68421309	68457499	68421309	68457499	-	ENST00000589459.5@WIPI1	ENST00000589459.5	protein_coding	68457342,68450728,68444493,68436382,68435620,68434556,68433464,68429996,68428829,68427135,68426075,68421309	68457499,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820	Gene ID= ENSG00000070540.12 TPM= 12.55 Transcript Type= processed_transcript
chr17	68456078	68457499	68456078	68457499	-	transcript5199.chr17.nnic@NA	transcript5199.chr17.nnic	NA	68456078	68457499	Gene ID= novel_gene_chr17_5200 TPM= 4.83 Transcript Type= NA
chr17	68512379	68533423	68512379	68533423	+	ENST00000392711.5@PRKAR1A	ENST00000392711.5	protein_coding	68512379,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512579,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68533423	Gene ID= ENSG00000108946.14 TPM= 2.28 Transcript Type= protein_coding
chr17	68512032	68532762	68512032	68532762	+	ENST00000358598.6@PRKAR1A	ENST00000358598.6	protein_coding	68512032,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512142,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532762	Gene ID= ENSG00000108946.14 TPM= 264.94 Transcript Type= protein_coding
chr17	68512427	68533431	68512427	68533431	+	ENST00000589228.5@PRKAR1A	ENST00000589228.5	protein_coding	68512427,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512548,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68533431	Gene ID= ENSG00000108946.14 TPM= 37.03 Transcript Type= protein_coding
chr17	68512450	68532762	68512450	68532762	+	ENST00000536854.6@PRKAR1A	ENST00000536854.6	protein_coding	68512450,68514987,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512548,68515119,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532762	Gene ID= ENSG00000108946.14 TPM= 16.85 Transcript Type= protein_coding
chr17	68512450	68532759	68512450	68532759	+	ENST00000392710.8@PRKAR1A	ENST00000392710.8	protein_coding	68512450,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512548,68515566,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532759	Gene ID= ENSG00000108946.14 TPM= 540.44 Transcript Type= nonsense_mediated_decay
chr17	69273971	69327182	69273971	69327182	-	ENST00000593153.5@ABCA5	ENST00000593153.5	protein_coding	69327052,69325699,69314314,69313092,69309262,69308280,69306725,69304669,69302718,69301139,69297191,69294655,69291216,69289862,69289177,69287613,69286221,69285898,69283953,69277641,69273971	69327182,69325817,69314430,69313296,69309423,69308368,69306954,69304810,69302906,69301286,69297359,69294713,69291326,69290037,69289296,69287751,69286311,69286037,69284072,69277842,69274128	Gene ID= ENSG00000154265.15 TPM= 3.86 Transcript Type= protein_coding
chr17	69306763	69327090	69306763	69327090	-	ENST00000587607.5@ABCA5	ENST00000587607.5	protein_coding	69327052,69314314,69313092,69309262,69308280,69306763	69327090,69314430,69313296,69309423,69308368,69306954	Gene ID= ENSG00000154265.15 TPM= 1.93 Transcript Type= non_stop_decay
chr17	69502264	69546038	69502264	69546038	+	transcript5256.chr17.nic@MAP2K6	transcript5256.chr17.nic	protein_coding	69502264,69505780,69516855,69517500,69519313,69520270,69521049,69523514,69524901,69526570,69536115,69541676	69502417,69505846,69516903,69517613,69519432,69520386,69521100,69523641,69524978,69526709,69536160,69546038	Gene ID= ENSG00000108984.13 TPM= 7.72 Transcript Type= NA
chr17	69550683	69553864	69550683	69553864	+	transcript5263.chr17.nnic@NA	transcript5263.chr17.nnic	NA	69550683	69553864	Gene ID= novel_gene_chr17_5264 TPM= 1.93 Transcript Type= NA
chr17	70166961	70169402	70166961	70169402	-	ENST00000590966.1@KCNJ2-AS1	ENST00000590966.1	antisense_RNA	70166961	70169402	Gene ID= ENSG00000267365.1 TPM= 2.9 Transcript Type= antisense_RNA
chr17	73192632	73208503	73192632	73208503	+	ENST00000618996.4@COG1	ENST00000618996.4	protein_coding	73192632,73192934,73196507,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73207181,73207702,73208314	73192831,73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73206817,73207256,73207739,73208503	Gene ID= ENSG00000166685.11 TPM= 81.97 Transcript Type= protein_coding
chr17	73193040	73208503	73193040	73208503	+	transcript5284.chr17.nic@COG1	transcript5284.chr17.nic	protein_coding	73193040,73196487,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73207181,73207702,73208314	73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73206817,73207256,73207739,73208503	Gene ID= ENSG00000166685.11 TPM= 11.02 Transcript Type= NA
chr17	73192990	73208507	73192990	73208507	+	ENST00000299886.8@COG1	ENST00000299886.8	protein_coding	73192990,73196507,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73207181,73208314	73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73206817,73207256,73208507	Gene ID= ENSG00000166685.11 TPM= 4.9 Transcript Type= protein_coding
chr17	73207353	73232367	73207353	73232367	-	ENST00000403627.7@FAM104A	ENST00000403627.7	protein_coding	73232086,73227165,73207353	73232367,73227264,73209768	Gene ID= ENSG00000133193.12 TPM= 42.96 Transcript Type= protein_coding
chr17	73207353	73232371	73207353	73232371	-	ENST00000405159.7@FAM104A	ENST00000405159.7	protein_coding	73232086,73227165,73212678,73207353	73232371,73227264,73212740,73209768	Gene ID= ENSG00000133193.12 TPM= 11.1 Transcript Type= protein_coding
chr17	73232381	73248874	73232381	73248874	+	transcript5292.chr17.nic@C17orf80	transcript5292.chr17.nic	protein_coding	73232381,73233220,73235476,73242244,73242896,73247241	73232489,73233325,73236995,73242351,73243003,73248874	Gene ID= ENSG00000141219.15 TPM= 10.81 Transcript Type= NA
chr17	73232433	73238634	73232433	73238634	+	transcript5305.chr17.nic@C17orf80	transcript5305.chr17.nic	protein_coding	73232433,73233220,73235476	73232489,73233325,73238634	Gene ID= ENSG00000141219.15 TPM= 3.09 Transcript Type= NA
chr17	73232694	73238634	73232694	73238634	+	transcript5306.chr17.nic@C17orf80	transcript5306.chr17.nic	protein_coding	73232694,73233220,73235476	73232717,73233325,73238634	Gene ID= ENSG00000141219.15 TPM= 2.12 Transcript Type= NA
chr17	73232637	73248874	73232637	73248874	+	ENST00000268942.12@C17orf80	ENST00000268942.12	protein_coding	73232637,73233220,73235476,73242896,73247241	73232717,73233325,73236995,73243003,73248874	Gene ID= ENSG00000141219.15 TPM= 5.98 Transcript Type= protein_coding
chr17	73232622	73248947	73232622	73248947	+	ENST00000359042.6@C17orf80	ENST00000359042.6	protein_coding	73232622,73233220,73235476,73242244,73242896,73247241	73232717,73233325,73236995,73242351,73243003,73248947	Gene ID= ENSG00000141219.15 TPM= 4.05 Transcript Type= protein_coding
chr17	73283624	73312175	73283624	73312175	-	ENST00000335793.3@CDC42EP4	ENST00000335793.3	protein_coding	73311893,73283624	73312175,73286612	Gene ID= ENSG00000179604.9 TPM= 83.02 Transcript Type= protein_coding
chr17	74203653	74210655	74203653	74210655	+	ENST00000311111.10@RPL38	ENST00000311111.10	protein_coding	74203653,74203918,74204130,74209187,74209804	74203745,74203958,74204190,74209309,74210655	Gene ID= ENSG00000172809.12 TPM= 296.59 Transcript Type= protein_coding
chr17	74203582	74209880	74203582	74209880	+	ENST00000439590.6@RPL38	ENST00000439590.6	protein_coding	74203582,74203918,74204130,74209187,74209804	74203710,74203958,74204190,74209309,74209880	Gene ID= ENSG00000172809.12 TPM= 77.47 Transcript Type= protein_coding
chr17	74203693	74209878	74203693	74209878	+	ENST00000584577.5@RPL38	ENST00000584577.5	protein_coding	74203693,74203918,74204130,74209187,74209813	74203745,74203958,74204190,74209309,74209878	Gene ID= ENSG00000172809.12 TPM= 292.73 Transcript Type= protein_coding
chr17	74203704	74209896	74203704	74209896	+	ENST00000533498.1@RPL38	ENST00000533498.1	protein_coding	74203704,74204130,74209187,74209804	74203958,74204190,74209309,74209896	Gene ID= ENSG00000172809.12 TPM= 10.86 Transcript Type= protein_coding
chr17	74213514	74262020	74213514	74262020	+	ENST00000269346.8@TTYH2	ENST00000269346.8	protein_coding	74213514,74222485,74230888,74237294,74243374,74243977,74249011,74249344,74249936,74250265,74252234,74253081,74253755,74260129	74213716,74222657,74230999,74237514,74243469,74244049,74249080,74249399,74250028,74250357,74252376,74253266,74253833,74262020	Gene ID= ENSG00000141540.10 TPM= 13.51 Transcript Type= protein_coding
chr17	74424783	74447429	74424783	74447429	+	transcript5327.chr17.nic@GPRC5C	transcript5327.chr17.nic	protein_coding	74424783,74439745,74443818,74446849	74424932,74440827,74443912,74447429	Gene ID= ENSG00000170412.16 TPM= 14.48 Transcript Type= NA
chr17	74431341	74447429	74431341	74447429	+	transcript5330.chr17.nic@GPRC5C	transcript5330.chr17.nic	protein_coding	74431341,74439745,74443818,74446849	74432523,74440827,74443912,74447429	Gene ID= ENSG00000170412.16 TPM= 18.34 Transcript Type= NA
chr17	74430913	74447429	74430913	74447429	+	ENST00000392627.5@GPRC5C	ENST00000392627.5	protein_coding	74430913,74439745,74443818,74446849	74432141,74440827,74443912,74447429	Gene ID= ENSG00000170412.16 TPM= 102.32 Transcript Type= protein_coding
chr17	74466416	74484796	74466416	74484796	+	ENST00000360141.7@CD300A	ENST00000360141.7	protein_coding	74466416,74473536,74474532,74477436,74481289,74481726,74484001	74466743,74473874,74474685,74477530,74481326,74481833,74484796	Gene ID= ENSG00000167851.13 TPM= 2.9 Transcript Type= protein_coding
chr17	74737217	74747300	74737217	74747300	+	ENST00000392613.9@RAB37	ENST00000392613.9	protein_coding	74737217,74740768,74742254,74743129,74743288,74744308,74744873,74745008,74745306	74737365,74740878,74742295,74743195,74743340,74744373,74744929,74745084,74747300	Gene ID= ENSG00000172794.19 TPM= 1.93 Transcript Type= protein_coding
chr17	74748652	74769353	74748652	74769353	+	ENST00000262613.9@SLC9A3R1	ENST00000262613.9	protein_coding	74748652,74762012,74763367,74766936,74768147,74768468	74749287,74762173,74763520,74766976,74768236,74769353	Gene ID= ENSG00000109062.11 TPM= 6.76 Transcript Type= protein_coding
chr17	74770547	74776374	74770547	74776374	-	transcript5347.chr17.nic@NAT9	transcript5347.chr17.nic	protein_coding	74776267,74775622,74773576,74772896,74772218,74771960,74770547	74776374,74775707,74773685,74773039,74772395,74771977,74771858	Gene ID= ENSG00000109065.11 TPM= 4.51 Transcript Type= NA
chr17	74770547	74776374	74770547	74776374	-	transcript5354.chr17.nic@NAT9	transcript5354.chr17.nic	protein_coding	74776267,74775622,74773576,74772896,74772218,74771960,74770547	74776374,74775707,74773685,74773039,74772395,74772054,74771858	Gene ID= ENSG00000109065.11 TPM= 7.4 Transcript Type= NA
chr17	74770547	74776374	74770547	74776374	-	transcript5358.chr17.nic@NAT9	transcript5358.chr17.nic	protein_coding	74776267,74775622,74773576,74772896,74771960,74770547	74776374,74775707,74773685,74773039,74772395,74771858	Gene ID= ENSG00000109065.11 TPM= 10.3 Transcript Type= NA
chr17	74770567	74776339	74770567	74776339	-	ENST00000580301.5@NAT9	ENST00000580301.5	protein_coding	74776267,74775622,74773576,74772896,74772218,74771960,74770567	74776339,74775707,74773685,74773039,74772277,74772054,74771858	Gene ID= ENSG00000109065.11 TPM= 9.65 Transcript Type= protein_coding
chr17	74770581	74776323	74770581	74776323	-	ENST00000583834.5@NAT9	ENST00000583834.5	protein_coding	74776267,74775622,74773576,74772896,74771960,74770581	74776323,74775707,74773685,74773039,74772277,74771858	Gene ID= ENSG00000109065.11 TPM= 5.79 Transcript Type= retained_intron
chr17	74862499	74873006	74862499	74873006	-	ENST00000578473.5@FDXR	ENST00000578473.5	protein_coding	74872243,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862499	74873006,74872133,74866879,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947	Gene ID= ENSG00000161513.11 TPM= 1.21 Transcript Type= retained_intron
chr17	74862497	74873031	74862497	74873031	-	transcript5372.chr17.nic@FDXR	transcript5372.chr17.nic	protein_coding	74872866,74872036,74866784,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862497	74873031,74872133,74866876,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947	Gene ID= ENSG00000161513.11 TPM= 3.14 Transcript Type= NA
chr17	74862497	74873023	74862497	74873023	-	ENST00000293195.9@FDXR	ENST00000293195.9	protein_coding	74872866,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862497	74873023,74872133,74866876,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947	Gene ID= ENSG00000161513.11 TPM= 5.07 Transcript Type= protein_coding
chr17	74862498	74872974	74862498	74872974	-	ENST00000420580.6@FDXR	ENST00000420580.6	protein_coding	74872866,74872036,74866784,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862498	74872974,74872133,74866879,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947	Gene ID= ENSG00000161513.11 TPM= 2.17 Transcript Type= protein_coding
chr17	74950744	74972734	74950744	74972734	-	ENST00000425042.6@HID1	ENST00000425042.6	protein_coding	74972591,74964483,74963740,74962965,74962234,74961873,74960026,74959881,74958911,74958673,74958327,74958141,74955792,74954138,74953545,74953006,74952269,74951905,74950744	74972734,74964632,74963910,74963081,74962340,74961989,74960248,74959937,74959051,74958763,74958478,74958219,74955956,74954365,74953651,74953086,74952360,74952063,74951633	Gene ID= ENSG00000167861.15 TPM= 2.9 Transcript Type= protein_coding
chr17	75012674	75021261	75012674	75021261	+	ENST00000301585.9@MRPL58	ENST00000301585.9	protein_coding	75012674,75017078,75019700,75020313,75020488,75020921	75012872,75017114,75019759,75020395,75020657,75021261	Gene ID= ENSG00000167862.9 TPM= 42.47 Transcript Type= protein_coding
chr17	75047245	75065884	75047245	75065884	+	ENST00000322444.6@KCTD2	ENST00000322444.6	protein_coding	75047245,75049220,75053014,75059510,75062120,75063018	75047589,75049328,75053105,75059605,75062245,75065884	Gene ID= ENSG00000180901.10 TPM= 27.99 Transcript Type= protein_coding
chr17	75038863	75046988	75038863	75046988	-	transcript5378.chr17.nnic@ATP5H	transcript5378.chr17.nnic	protein_coding	75046925,75042181,75040092,75039209,75038863	75046988,75042277,75040163,75039271,75039063	Gene ID= ENSG00000167863.11 TPM= 18.18 Transcript Type= NA
chr17	75038863	75046963	75038863	75046963	-	ENST00000301587.8@ATP5H	ENST00000301587.8	protein_coding	75046925,75042529,75042181,75040092,75039209,75038863	75046963,75042659,75042277,75040163,75039271,75039063	Gene ID= ENSG00000167863.11 TPM= 296.19 Transcript Type= protein_coding
chr17	75038863	75046985	75038863	75046985	-	ENST00000344546.8@ATP5H	ENST00000344546.8	protein_coding	75046925,75042529,75042181,75039209,75038863	75046985,75042659,75042277,75039271,75039063	Gene ID= ENSG00000167863.11 TPM= 11.42 Transcript Type= protein_coding
chr17	75087960	75106162	75087960	75106162	+	ENST00000329783.8@SLC16A5	ENST00000329783.8	protein_coding	75087960,75089151,75093589,75098038,75100007,75103970,75105880	75088044,75089304,75093835,75098181,75100816,75104180,75106162	Gene ID= ENSG00000170190.15 TPM= 5.79 Transcript Type= protein_coding
chr17	75109987	75130265	75109987	75130265	+	ENST00000245543.5@ARMC7	ENST00000245543.5	protein_coding	75109987,75110463,75128677	75110379,75110606,75130265	Gene ID= ENSG00000125449.6 TPM= 6.76 Transcript Type= protein_coding
chr17	75130220	75131809	75130220	75131809	-	transcript5400.chr17.nnic@NA	transcript5400.chr17.nnic	NA	75130220	75131809	Gene ID= novel_gene_chr17_5401 TPM= 5.79 Transcript Type= NA
chr17	75130228	75131777	75130228	75131777	-	transcript5386.chr17.nic@NT5C	transcript5386.chr17.nic	protein_coding	75131534,75131181,75130965,75130753,75130228	75131777,75131281,75131105,75130867,75130642	Gene ID= ENSG00000125458.6 TPM= 16.09 Transcript Type= NA
chr17	75130228	75131795	75130228	75131795	-	ENST00000245552.6@NT5C	ENST00000245552.6	protein_coding	75131534,75131181,75131045,75130753,75130228	75131795,75131281,75131105,75130867,75130642	Gene ID= ENSG00000125458.6 TPM= 81.73 Transcript Type= protein_coding
chr17	75130228	75131749	75130228	75131749	-	ENST00000583655.5@NT5C	ENST00000583655.5	protein_coding	75130965,75130753,75130228	75131749,75130867,75130642	Gene ID= ENSG00000125458.6 TPM= 15.13 Transcript Type= retained_intron
chr17	75135248	75154683	75135248	75154683	-	ENST00000409753.7@JPT1	ENST00000409753.7	protein_coding	75154342,75148529,75147556,75146666,75135248	75154683,75148671,75147653,75146684,75136250	Gene ID= ENSG00000189159.15 TPM= 29.92 Transcript Type= protein_coding
chr17	75165586	75182983	75165586	75182983	-	ENST00000420826.6@SUMO2	ENST00000420826.6	protein_coding	75182814,75181057,75174752,75165586	75182983,75181188,75174823,75168401	Gene ID= ENSG00000188612.11 TPM= 3.86 Transcript Type= protein_coding
chr17	75205691	75235758	75205691	75235758	+	ENST00000245544.8@NUP85	ENST00000245544.8	protein_coding	75205691,75208527,75209823,75211992,75213076,75215754,75218185,75225103,75225342,75225698,75226051,75231340,75231573,75231828,75232851,75233058,75234637,75235100,75235578	75205794,75208620,75209985,75212062,75213119,75215823,75218306,75225237,75225464,75225829,75226157,75231423,75231638,75231979,75232968,75233158,75234788,75235201,75235758	Gene ID= ENSG00000125450.10 TPM= 31.86 Transcript Type= protein_coding
chr17	75236599	75261804	75236599	75261804	-	ENST00000537686.5@GGA3	ENST00000537686.5	protein_coding	75261548,75246712,75246509,75244619,75243447,75243063,75242831,75242336,75241615,75241400,75240812,75240342,75239789,75239375,75238914,75238652,75236599	75261804,75246796,75246584,75244717,75243570,75243166,75242911,75242473,75241696,75241516,75241057,75240412,75240108,75239571,75239083,75238762,75238389	Gene ID= ENSG00000125447.16 TPM= 35.72 Transcript Type= protein_coding
chr17	75236599	75261600	75236599	75261600	-	ENST00000538886.5@GGA3	ENST00000538886.5	protein_coding	75261548,75246712,75246509,75243447,75243063,75242831,75242336,75241615,75241400,75240812,75240342,75239789,75239375,75238914,75238652,75236599	75261600,75246796,75246584,75243570,75243166,75242911,75242473,75241696,75241516,75241057,75240412,75240108,75239571,75239083,75238762,75238389	Gene ID= ENSG00000125447.16 TPM= 21.24 Transcript Type= protein_coding
chr17	75258827	75261605	75258827	75261605	-	transcript5473.chr17.nnic@NA	transcript5473.chr17.nnic	NA	75258827	75261605	Gene ID= novel_gene_chr17_5474 TPM= 1.93 Transcript Type= NA
chr17	75261870	75266363	75261870	75266363	+	transcript5440.chr17.nic@MRPS7	transcript5440.chr17.nic	protein_coding	75261870,75262497,75262804,75263340,75265702,75266193	75261983,75262688,75262867,75263507,75265966,75266363	Gene ID= ENSG00000125445.10 TPM= 11.1 Transcript Type= NA
chr17	75261674	75266373	75261674	75266373	+	ENST00000245539.10@MRPS7	ENST00000245539.10	protein_coding	75261674,75262497,75262804,75263340,75265702	75261983,75262688,75262867,75263507,75266373	Gene ID= ENSG00000125445.10 TPM= 183.89 Transcript Type= protein_coding
chr17	75261912	75266330	75261912	75266330	+	ENST00000579002.5@MRPS7	ENST00000579002.5	protein_coding	75261912,75262804,75263340,75265702	75262688,75262867,75263507,75266330	Gene ID= ENSG00000125445.10 TPM= 9.65 Transcript Type= protein_coding
chr17	75266228	75271180	75266228	75271180	-	transcript5441.chr17.nic@MIF4GD	transcript5441.chr17.nic	protein_coding	75270114,75269347,75268083,75267746,75267538,75266228	75271180,75269469,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 10.86 Transcript Type= NA
chr17	75266228	75271258	75266228	75271258	-	transcript5445.chr17.nic@MIF4GD	transcript5445.chr17.nic	protein_coding	75271144,75270114,75269347,75268083,75267538,75266228	75271258,75270245,75269469,75268192,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 4.54 Transcript Type= NA
chr17	75266228	75271218	75266228	75271218	-	ENST00000325102.12@MIF4GD	ENST00000325102.12	protein_coding	75271144,75270114,75268083,75267746,75267538,75266228	75271218,75270245,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 27.95 Transcript Type= protein_coding
chr17	75266233	75271173	75266233	75271173	-	ENST00000245551.9@MIF4GD	ENST00000245551.9	protein_coding	75271144,75270114,75269347,75268083,75267746,75267538,75266233	75271173,75270245,75269448,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 4.78 Transcript Type= protein_coding
chr17	75266247	75271227	75266247	75271227	-	ENST00000579297.5@MIF4GD	ENST00000579297.5	protein_coding	75271144,75270114,75269347,75268083,75267746,75267538,75266247	75271227,75270245,75269469,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 22.4 Transcript Type= protein_coding
chr17	75266232	75270248	75266232	75270248	-	ENST00000618645.4@MIF4GD	ENST00000618645.4	protein_coding	75270114,75268083,75267746,75267538,75266232	75270248,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 3.81 Transcript Type= protein_coding
chr17	75266264	75271155	75266264	75271155	-	ENST00000577542.5@MIF4GD	ENST00000577542.5	protein_coding	75270943,75270114,75269347,75268083,75267746,75267538,75266264	75271155,75270245,75269469,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 1.93 Transcript Type= protein_coding
chr17	75271285	75274929	75271285	75274929	+	transcript5469.chr17.nnic@NA	transcript5469.chr17.nnic	NA	75271285	75274929	Gene ID= novel_gene_chr17_5470 TPM= 4.83 Transcript Type= NA
chr17	75272992	75289431	75272992	75289431	-	transcript5432.chr17.nic@SLC25A19	transcript5432.chr17.nic	protein_coding	75289354,75288388,75286633,75286304,75283423,75278152,75277353,75272992	75289431,75288591,75286802,75286459,75283593,75278335,75277483,75273639	Gene ID= ENSG00000125454.11 TPM= 7.24 Transcript Type= NA
chr17	75272992	75289390	75272992	75289390	-	ENST00000416858.6@SLC25A19	ENST00000416858.6	protein_coding	75289354,75288502,75286633,75286304,75283423,75278152,75277353,75272992	75289390,75288591,75286802,75286459,75283593,75278335,75277483,75273639	Gene ID= ENSG00000125454.11 TPM= 7.24 Transcript Type= protein_coding
chr17	75318076	75405653	75318076	75405653	-	ENST00000316804.9@GRB2	ENST00000316804.9	protein_coding	75405489,75393551,75332700,75325898,75321659,75318076	75405653,75393765,75332797,75326020,75321827,75320553	Gene ID= ENSG00000177885.13 TPM= 32.82 Transcript Type= protein_coding
chr17	75402870	75403088	75402870	75403088	+	transcript5484.chr17.nnic@NA	transcript5484.chr17.nnic	NA	75402870	75403088	Gene ID= novel_gene_chr17_5485 TPM= 1.93 Transcript Type= NA
chr17	75500261	75515583	75500261	75515583	-	ENST00000321617.7@CASKIN2	ENST00000321617.7	protein_coding	75515401,75513711,75508234,75507584,75506984,75506799,75506583,75506305,75505821,75505557,75504812,75504572,75504420,75504215,75503852,75503659,75503389,75501779,75501468,75500261	75515583,75514208,75508285,75507681,75507129,75506894,75506713,75506413,75505929,75505651,75505073,75504693,75504480,75504306,75503962,75503760,75503527,75503254,75501690,75501170	Gene ID= ENSG00000177303.9 TPM= 23.17 Transcript Type= protein_coding
chr17	75516507	75524733	75516507	75524733	+	transcript5494.chr17.nic@TSEN54	transcript5494.chr17.nic	protein_coding	75516507,75516746,75517009,75517161,75517557,75518995,75521409,75522007,75523275,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75521510,75522333,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 1.93 Transcript Type= NA
chr17	75516559	75524733	75516559	75524733	+	transcript5498.chr17.nic@TSEN54	transcript5498.chr17.nic	protein_coding	75516559,75516746,75517009,75517161,75517557,75518995,75521409,75523275,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75522333,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 1.93 Transcript Type= NA
chr17	75516507	75524733	75516507	75524733	+	transcript5499.chr17.nic@TSEN54	transcript5499.chr17.nic	protein_coding	75516507,75516746,75517161,75517557,75518995,75521409,75521705,75523275,75523663,75524262	75516616,75517072,75517244,75517655,75519047,75521510,75522333,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 3.86 Transcript Type= NA
chr17	75516507	75524733	75516507	75524733	+	transcript5505.chr17.nic@TSEN54	transcript5505.chr17.nic	protein_coding	75516507,75516746,75517009,75517161,75517557,75518995,75521409,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 1.93 Transcript Type= NA
chr17	75516525	75524739	75516525	75524739	+	ENST00000333213.10@TSEN54	ENST00000333213.10	protein_coding	75516525,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75523275,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75521510,75522333,75523335,75523779,75524739	Gene ID= ENSG00000182173.12 TPM= 22.2 Transcript Type= protein_coding
chr17	75590916	75593936	75590916	75593936	+	transcript5514.chr17.nnic@NA	transcript5514.chr17.nnic	NA	75590916	75593936	Gene ID= novel_gene_chr17_5515 TPM= 1.93 Transcript Type= NA
chr17	75626854	75667174	75626854	75667174	-	transcript5517.chr17.nic@RECQL5	transcript5517.chr17.nic	protein_coding	75666428,75665051,75662479,75661606,75660955,75658298,75651186,75650517,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626854	75667174,75665172,75662997,75661708,75661066,75658460,75651265,75650718,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522	Gene ID= ENSG00000108469.14 TPM= 6.76 Transcript Type= NA
chr17	75626854	75667189	75626854	75667189	-	ENST00000317905.9@RECQL5	ENST00000317905.9	protein_coding	75667044,75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626854	75667189,75666571,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522	Gene ID= ENSG00000108469.14 TPM= 8.69 Transcript Type= protein_coding
chr17	75667325	75706757	75667325	75706757	+	transcript5527.chr17.nic@SAP30BP	transcript5527.chr17.nic	protein_coding	75667325,75668516,75671816,75693440,75699783,75702480,75703311,75703808,75704756,75705611,75706008,75706340	75667478,75668625,75671863,75693482,75699871,75702571,75703371,75703859,75704814,75705693,75706092,75706757	Gene ID= ENSG00000161526.14 TPM= 6.11 Transcript Type= NA
chr17	75667116	75708059	75667116	75708059	+	ENST00000584667.5@SAP30BP	ENST00000584667.5	protein_coding	75667116,75668516,75671816,75693440,75699783,75702480,75703311,75703808,75704756,75706008,75706340	75667478,75668625,75671863,75693482,75699871,75702571,75703371,75703859,75704814,75706092,75708059	Gene ID= ENSG00000161526.14 TPM= 39.58 Transcript Type= protein_coding
chr17	75667325	75706757	75667325	75706757	+	transcript5536.chr17.nic@SAP30BP	transcript5536.chr17.nic	protein_coding	75667325,75668516,75671816,75693440,75699783,75702480,75703311,75703808,75704756,75706340	75667478,75668625,75671863,75693482,75699871,75702571,75703371,75703859,75706092,75706757	Gene ID= ENSG00000161526.14 TPM= 3.86 Transcript Type= NA
chr17	75704772	75706771	75704772	75706771	+	ENST00000584557.1@SAP30BP	ENST00000584557.1	protein_coding	75704772	75706771	Gene ID= ENSG00000161526.14 TPM= 2.25 Transcript Type= retained_intron
chr17	75667374	75706756	75667374	75706756	+	ENST00000580322.5@SAP30BP	ENST00000580322.5	protein_coding	75667374,75668516,75671816,75693440,75699783,75702480,75703311,75703808,75704756,75705611,75706340	75667478,75668625,75671863,75693482,75699871,75702571,75703371,75703859,75704814,75706092,75706756	Gene ID= ENSG00000161526.14 TPM= 3.21 Transcript Type= nonsense_mediated_decay
chr17	75724696	75757818	75724696	75757818	+	ENST00000449880.6@ITGB4	ENST00000449880.6	protein_coding	75724696,75727195,75727404,75727651,75728377,75729265,75730241,75730875,75731246,75731812,75732163,75733490,75736051,75736288,75736565,75737322,75737538,75739672,75739880,75740358,75740793,75740982,75742341,75742582,75743713,75748841,75750111,75750680,75750974,75752174,75752446,75754576,75755055,75755701,75756429,75756704,75756943,75757200,75757416	75724782,75727277,75727505,75727855,75728473,75729436,75730504,75730964,75731368,75731973,75732239,75733692,75736154,75736386,75736694,75737444,75737644,75739705,75740071,75740461,75740851,75741005,75742489,75742761,75743861,75749045,75750268,75750860,75751111,75752356,75752577,75754815,75755213,75755850,75756617,75756859,75757107,75757310,75757818	Gene ID= ENSG00000132470.13 TPM= 4.83 Transcript Type= protein_coding
chr17	75757944	75765711	75757944	75765711	-	ENST00000588479.5@GALK1	ENST00000588479.5	protein_coding	75764972,75763897,75763320,75763014,75762704,75758449,75758210,75757944	75765711,75764086,75763439,75763149,75762885,75758599,75758372,75758127	Gene ID= ENSG00000108479.11 TPM= 21.24 Transcript Type= protein_coding
chr17	75776434	75779779	75776434	75779779	-	ENST00000254810.8@H3F3B	ENST00000254810.8	protein_coding	75779657,75779047,75778810,75776434	75779779,75779184,75778963,75778723	Gene ID= ENSG00000132475.10 TPM= 39.58 Transcript Type= protein_coding
chr17	75778072	75779772	75778072	75779772	-	ENST00000586518.1@H3F3B	ENST00000586518.1	protein_coding	75778072	75779772	Gene ID= ENSG00000132475.10 TPM= 5.79 Transcript Type= retained_intron
chr17	75778574	75779780	75778574	75779780	-	ENST00000589599.5@H3F3B	ENST00000589599.5	protein_coding	75779647,75779047,75778810,75778574	75779780,75779184,75778963,75778723	Gene ID= ENSG00000132475.10 TPM= 25.1 Transcript Type= protein_coding
chr17	75841751	75843919	75841751	75843919	-	transcript5560.chr17.nic@UNC13D	transcript5560.chr17.nic	protein_coding	75843159,75843014,75841751	75843919,75843073,75842923	Gene ID= ENSG00000092929.11 TPM= 1.93 Transcript Type= NA
chr17	75845699	75855420	75845699	75855420	-	ENST00000254806.7@WBP2	ENST00000254806.7	protein_coding	75855239,75851568,75849604,75848570,75847796,75847487,75846908,75845699	75855420,75851676,75849739,75848662,75847930,75847609,75846984,75846787	Gene ID= ENSG00000132471.11 TPM= 405.03 Transcript Type= protein_coding
chr17	75845699	75855420	75845699	75855420	-	ENST00000626827.2@WBP2	ENST00000626827.2	protein_coding	75855239,75851568,75849604,75848570,75847796,75847487,75845699	75855420,75851676,75849739,75848662,75847930,75847609,75846787	Gene ID= ENSG00000132471.11 TPM= 229.02 Transcript Type= protein_coding
chr17	75845772	75855306	75845772	75855306	-	ENST00000590221.5@WBP2	ENST00000590221.5	protein_coding	75855239,75851568,75849604,75848570,75847796,75847487,75846908,75845772	75855306,75851676,75849739,75848662,75847930,75847597,75846984,75846787	Gene ID= ENSG00000132471.11 TPM= 8.45 Transcript Type= protein_coding
chr17	75874161	75878575	75874161	75878575	-	ENST00000254816.5@TRIM47	ENST00000254816.5	protein_coding	75877874,75876718,75876262,75875901,75875400,75874161	75878575,75876813,75876492,75876099,75875474,75875123	Gene ID= ENSG00000132481.6 TPM= 26.06 Transcript Type= protein_coding
chr17	75888960	75897003	75888960	75897003	-	ENST00000269383.7@TRIM65	ENST00000269383.7	protein_coding	75896524,75892755,75892267,75892011,75891813,75888960	75897003,75892850,75892500,75892185,75891878,75891347	Gene ID= ENSG00000141569.10 TPM= 16.41 Transcript Type= protein_coding
chr17	75896049	75896966	75896049	75896966	-	transcript5610.chr17.nnic@NA	transcript5610.chr17.nnic	NA	75896049	75896966	Gene ID= novel_gene_chr17_5611 TPM= 5.79 Transcript Type= NA
chr17	75898540	75900736	75898540	75900736	+	transcript5608.chr17.nnic@NA	transcript5608.chr17.nnic	NA	75898540	75900736	Gene ID= novel_gene_chr17_5609 TPM= 5.15 Transcript Type= NA
chr17	75898643	75905413	75898643	75905413	-	ENST00000309352.3@MRPL38	ENST00000309352.3	protein_coding	75904809,75904540,75902020,75901712,75901201,75900982,75899516,75899158,75898643	75905413,75904719,75902154,75901920,75901273,75901027,75899674,75899294,75898986	Gene ID= ENSG00000204316.12 TPM= 238.75 Transcript Type= protein_coding
chr17	75909574	75941038	75909574	75941038	-	ENST00000586717.5@FBF1	ENST00000586717.5	protein_coding	75940848,75938147,75937566,75932995,75931229,75929997,75928076,75927455,75926758,75926288,75926030,75925347,75923186,75921945,75921472,75921244,75920274,75920007,75919668,75918162,75917931,75917732,75915017,75914747,75914122,75913913,75913702,75912192,75909574	75941038,75938232,75937593,75933088,75931289,75930047,75928193,75927532,75926877,75926426,75926163,75925446,75923641,75922046,75921560,75921302,75920429,75920107,75919874,75918269,75918070,75917850,75915139,75914932,75914295,75914050,75913819,75912307,75910806	Gene ID= ENSG00000188878.19 TPM= 1.93 Transcript Type= protein_coding
chr17	75942878	75979177	75942878	75979177	-	transcript5616.chr17.nic@ACOX1	transcript5616.chr17.nic	protein_coding	75978965,75978534,75960215,75957459,75955828,75955566,75953451,75951415,75950774,75949718,75949495,75949217,75948251,75946707,75942878	75979177,75978693,75960375,75957566,75955947,75955681,75953620,75951577,75950964,75949897,75949600,75949360,75948457,75946795,75943213	Gene ID= ENSG00000161533.11 TPM= 3.86 Transcript Type= NA
chr17	75979220	76000586	75979220	76000586	+	ENST00000397640.5@TEN1	ENST00000397640.5	protein_coding	75979220,75986187,75991466,76000141	75979511,75986284,75991623,76000586	Gene ID= ENSG00000257949.6 TPM= 13.51 Transcript Type= protein_coding
chr17	75979260	76005999	75979260	76005999	+	ENST00000569284.1@TEN1-CDK3	ENST00000569284.1	protein_coding	75979260,75986187,75991466,76000141,76001874,76002022,76002248,76002511,76003195,76005298	75979511,75986284,75991623,76001541,76001951,76002142,76002418,76002612,76003398,76005999	Gene ID= ENSG00000261408.6 TPM= 1.93 Transcript Type= protein_coding
chr17	76039103	76072653	76039103	76072653	-	ENST00000307877.6@SRP68	ENST00000307877.6	protein_coding	76072308,76070378,76067217,76063976,76061492,76061110,76060308,76057403,76050428,76047906,76046038,76045292,76043829,76040903,76040419,76039103	76072653,76070444,76067330,76064171,76061574,76061219,76060390,76057543,76050526,76047970,76046194,76045386,76043958,76040978,76040474,76039933	Gene ID= ENSG00000167881.14 TPM= 224.92 Transcript Type= protein_coding
chr17	76083577	76091661	76083577	76091661	-	transcript5652.chr17.nic@EXOC7	transcript5652.chr17.nic	protein_coding	76089175,76088771,76088060,76087654,76086080,76085677,76085314,76084517,76084248,76084006,76083577	76091661,76088923,76088562,76087720,76086145,76085797,76085409,76084580,76084289,76084139,76083750	Gene ID= ENSG00000182473.21 TPM= 16.41 Transcript Type= NA
chr17	76081017	76103695	76081017	76103695	-	ENST00000332065.9@EXOC7	ENST00000332065.9	protein_coding	76103633,76103361,76101679,76101271,76097796,76094414,76089175,76088771,76088464,76088060,76087654,76086080,76085677,76085314,76084517,76084248,76084006,76081017	76103695,76103426,76101863,76101376,76098018,76094581,76089320,76088923,76088562,76088122,76087720,76086145,76085797,76085409,76084580,76084289,76084139,76083750	Gene ID= ENSG00000182473.21 TPM= 89.77 Transcript Type= protein_coding
chr17	76092315	76103743	76092315	76103743	-	ENST00000405068.3@EXOC7	ENST00000405068.3	protein_coding	76103633,76103361,76101679,76101271,76097796,76092315	76103743,76103426,76101863,76101376,76098018,76094581	Gene ID= ENSG00000182473.21 TPM= 7.72 Transcript Type= retained_intron
chr17	76144340	76240533	76144340	76240533	-	transcript5660.chr17.nnic@RNF157	transcript5660.chr17.nnic	protein_coding	76240153,76212364,76175748,76173702,76167651,76167009,76166461,76165502,76164748,76162552,76161843,76161535,76159335,76158393,76156210,76155562,76155252,76154283,76152355,76144340	76240533,76212482,76175813,76173790,76167797,76167126,76166527,76165545,76164795,76162623,76162002,76161647,76159573,76158501,76156321,76155734,76155317,76154328,76152465,76145353	Gene ID= ENSG00000141576.14 TPM= 2.9 Transcript Type= NA
chr17	76142453	76240373	76142453	76240373	-	ENST00000269391.10@RNF157	ENST00000269391.10	protein_coding	76240153,76212364,76173702,76167651,76167009,76166461,76165502,76164748,76162552,76161843,76161535,76159335,76158393,76156210,76155562,76155252,76154283,76152355,76142453	76240373,76212482,76173790,76167797,76167126,76166527,76165545,76164795,76162623,76162002,76161647,76159573,76158501,76156321,76155734,76155317,76154328,76152465,76145353	Gene ID= ENSG00000141576.14 TPM= 108.11 Transcript Type= protein_coding
chr17	76144340	76240308	76144340	76240308	-	ENST00000319945.10@RNF157	ENST00000319945.10	protein_coding	76240153,76212364,76173702,76167651,76167009,76166461,76165502,76164748,76162552,76161843,76161535,76159335,76158393,76156210,76155562,76154283,76152355,76144340	76240308,76212482,76173790,76167797,76167126,76166527,76165545,76164795,76162623,76162002,76161647,76159573,76158501,76156321,76155734,76154328,76152465,76145353	Gene ID= ENSG00000141576.14 TPM= 2.9 Transcript Type= protein_coding
chr17	76240589	76241420	76240589	76241420	+	transcript5670.chr17.nnic@NA	transcript5670.chr17.nnic	NA	76240589	76241420	Gene ID= novel_gene_chr17_5671 TPM= 2.9 Transcript Type= NA
chr17	76265128	76270707	76265128	76270707	+	transcript5677.chr17.nnic@UBALD2	transcript5677.chr17.nnic	protein_coding	76265128,76265907,76270194,76270551	76265625,76265969,76270290,76270707	Gene ID= ENSG00000185262.8 TPM= 48.27 Transcript Type= NA
chr17	76265202	76271299	76265202	76271299	+	ENST00000327490.7@UBALD2	ENST00000327490.7	protein_coding	76265202,76265907,76270194	76265625,76265969,76271299	Gene ID= ENSG00000185262.8 TPM= 182.44 Transcript Type= protein_coding
chr17	76265203	76267994	76265203	76267994	+	transcript5687.chr17.nnic@NA	transcript5687.chr17.nnic	NA	76265203	76267994	Gene ID= novel_gene_chr17_5688 TPM= 7.72 Transcript Type= NA
chr17	76268733	76271157	76268733	76271157	-	transcript5689.chr17.nnic@NA	transcript5689.chr17.nnic	NA	76268733	76271157	Gene ID= novel_gene_chr17_5690 TPM= 76.26 Transcript Type= NA
chr17	76309486	76354149	76309486	76354149	-	ENST00000446526.7@PRPSAP1	ENST00000446526.7	protein_coding	76353534,76348529,76344671,76332263,76330551,76330043,76328717,76313821,76312870,76309486	76354149,76348581,76344737,76332435,76330666,76330098,76328862,76313891,76313016,76311700	Gene ID= ENSG00000161542.16 TPM= 37.65 Transcript Type= protein_coding
chr17	76310934	76353931	76310934	76353931	-	transcript5696.chr17.nnic@PRPSAP1	transcript5696.chr17.nnic	protein_coding	76353534,76348529,76344671,76332263,76330043,76328717,76313821,76312870,76310934	76353931,76348581,76344737,76332435,76330098,76328862,76313891,76313016,76311700	Gene ID= ENSG00000161542.16 TPM= 3.86 Transcript Type= NA
chr17	76310934	76353931	76310934	76353931	-	transcript5697.chr17.nic@PRPSAP1	transcript5697.chr17.nic	protein_coding	76353534,76348529,76344671,76332263,76330551,76330043,76328717,76312870,76310934	76353931,76348581,76344737,76332435,76330666,76330098,76328862,76313891,76311700	Gene ID= ENSG00000161542.16 TPM= 1.93 Transcript Type= NA
chr17	76383235	76387855	76383235	76387855	+	transcript5700.chr17.nic@SPHK1	transcript5700.chr17.nic	protein_coding	76383235,76385451,76385985,76386221,76386393,76386806	76383529,76385654,76386137,76386315,76386508,76387855	Gene ID= ENSG00000176170.13 TPM= 1.93 Transcript Type= NA
chr17	76399488	76453227	76399488	76453227	-	transcript5708.chr17.nic@UBE2O	transcript5708.chr17.nic	protein_coding	76452725,76405513,76405206,76402602,76402064,76401011,76400441,76400147,76399488	76453227,76405572,76405316,76402699,76402127,76401154,76400550,76400297,76399921	Gene ID= ENSG00000175931.12 TPM= 2.41 Transcript Type= NA
chr17	76389451	76453206	76389451	76453206	-	ENST00000319380.11@UBE2O	ENST00000319380.11	protein_coding	76452725,76405513,76405206,76402602,76402064,76401011,76400441,76400147,76399449,76398837,76398472,76398255,76397799,76396128,76395725,76391910,76391756,76389451	76453206,76405572,76405316,76402699,76402127,76401154,76400550,76400297,76399921,76398991,76398584,76398383,76397888,76396821,76395861,76392113,76391813,76391613	Gene ID= ENSG00000175931.12 TPM= 35.23 Transcript Type= protein_coding
chr17	76527356	76537905	76527356	76537905	-	ENST00000293230.9@CYGB	ENST00000293230.9	protein_coding	76537400,76531460,76530979,76527356	76537905,76531691,76531142,76528611	Gene ID= ENSG00000161544.9 TPM= 10.62 Transcript Type= protein_coding
chr17	76557758	76565343	76557758	76565343	+	transcript5723.chr17.nic@SNHG16	transcript5723.chr17.nic	processed_transcript	76557758,76558945,76561288,76563119	76557857,76559043,76561398,76565343	Gene ID= ENSG00000163597.14 TPM= 72.14 Transcript Type= NA
chr17	76557758	76565348	76557758	76565348	+	transcript5725.chr17.nnic@SNHG16	transcript5725.chr17.nnic	processed_transcript	76557758,76561288,76563119,76563778	76557857,76561398,76563752,76565348	Gene ID= ENSG00000163597.14 TPM= 33.21 Transcript Type= NA
chr17	76557770	76565343	76557770	76565343	+	ENST00000493536.5@SNHG16	ENST00000493536.5	processed_transcript	76557770,76561288,76563119	76557857,76561398,76565343	Gene ID= ENSG00000163597.14 TPM= 141.64 Transcript Type= lincRNA
chr17	76565379	76586183	76565379	76586183	-	transcript5715.chr17.nnic@ST6GALNAC2	transcript5715.chr17.nnic	protein_coding	76585684,76578756,76574365,76573195,76572637,76570565,76568713,76567453,76565379	76586183,76578816,76574539,76573363,76572802,76570668,76568796,76567552,76566271	Gene ID= ENSG00000070731.10 TPM= 1.93 Transcript Type= NA
chr17	76565379	76586169	76565379	76586169	-	transcript5717.chr17.nic@ST6GALNAC2	transcript5717.chr17.nic	protein_coding	76585684,76574365,76573195,76572637,76570565,76568713,76567453,76565379	76586169,76574539,76573363,76572775,76570668,76568796,76567552,76566271	Gene ID= ENSG00000070731.10 TPM= 4.83 Transcript Type= NA
chr17	76565379	76586128	76565379	76586128	-	ENST00000225276.9@ST6GALNAC2	ENST00000225276.9	protein_coding	76585684,76578756,76574365,76573195,76572637,76570565,76568713,76567453,76565379	76586128,76578816,76574539,76573363,76572775,76570668,76568796,76567552,76566271	Gene ID= ENSG00000070731.10 TPM= 24.13 Transcript Type= protein_coding
chr17	76679569	76711016	76679569	76711016	-	ENST00000449428.6@MXRA7	ENST00000449428.6	protein_coding	76710605,76688113,76685072,76679569	76711016,76688176,76685165,76680879	Gene ID= ENSG00000182534.13 TPM= 91.39 Transcript Type= protein_coding
chr17	76679569	76711004	76679569	76711004	-	ENST00000375036.6@MXRA7	ENST00000375036.6	protein_coding	76710605,76688113,76685072,76683847,76679569	76711004,76688176,76685165,76683927,76680879	Gene ID= ENSG00000182534.13 TPM= 47.95 Transcript Type= protein_coding
chr17	76718446	76726784	76718446	76726784	-	ENST00000542934.5@JMJD6	ENST00000542934.5	protein_coding	76726347,76725467,76723772,76721798,76721263,76720360,76718446	76726784,76725855,76724058,76721933,76721356,76720498,76718860	Gene ID= ENSG00000070495.14 TPM= 7.24 Transcript Type= nonsense_mediated_decay
chr17	76718453	76726590	76718453	76726590	-	ENST00000397625.8@JMJD6	ENST00000397625.8	protein_coding	76726347,76725467,76723772,76721798,76720360,76718453	76726590,76725855,76724058,76721933,76720498,76718860	Gene ID= ENSG00000070495.14 TPM= 74.81 Transcript Type= protein_coding
chr17	76726030	76733879	76726030	76733879	+	transcript5768.chr17.nnic@METTL23	transcript5768.chr17.nnic	protein_coding	76726030,76729690,76732978,76733293,76733521	76726287,76729794,76733215,76733377,76733879	Gene ID= ENSG00000181038.13 TPM= 2.9 Transcript Type= NA
chr17	76726843	76733936	76726843	76733936	+	ENST00000588783.5@METTL23	ENST00000588783.5	protein_coding	76726843,76729690,76732978,76733293,76733521	76727178,76729794,76733215,76733381,76733936	Gene ID= ENSG00000181038.13 TPM= 1.93 Transcript Type= protein_coding
chr17	76725983	76733879	76725983	76733879	+	transcript5775.chr17.nnic@METTL23	transcript5775.chr17.nnic	protein_coding	76725983,76732978,76733293,76733521	76726287,76733215,76733377,76733879	Gene ID= ENSG00000181038.13 TPM= 3.86 Transcript Type= NA
chr17	76726854	76733878	76726854	76733878	+	ENST00000590964.5@METTL23	ENST00000590964.5	protein_coding	76726854,76732978,76733293,76733521	76727178,76733215,76733377,76733878	Gene ID= ENSG00000181038.13 TPM= 3.86 Transcript Type= protein_coding
chr17	76734147	76737931	76734147	76737931	-	transcript5782.chr17.nic@SRSF2	transcript5782.chr17.nic	protein_coding	76736799,76736154,76735772,76734147	76737931,76736464,76735875,76735158	Gene ID= ENSG00000161547.16 TPM= 21.24 Transcript Type= NA
chr17	76734119	76737374	76734119	76737374	-	ENST00000359995.9@SRSF2	ENST00000359995.9	protein_coding	76736799,76736154,76734119	76737374,76736464,76735158	Gene ID= ENSG00000161547.16 TPM= 88.64 Transcript Type= protein_coding
chr17	76734123	76737308	76734123	76737308	-	ENST00000585202.5@SRSF2	ENST00000585202.5	protein_coding	76736799,76736154,76735061,76734123	76737308,76736464,76735158,76734562	Gene ID= ENSG00000161547.16 TPM= 8.52 Transcript Type= nonsense_mediated_decay
chr17	76734115	76737333	76734115	76737333	-	ENST00000392485.2@SRSF2	ENST00000392485.2	protein_coding	76736799,76734115	76737333,76736464	Gene ID= ENSG00000161547.16 TPM= 9.65 Transcript Type= protein_coding
chr17	76738001	76745432	76738001	76745432	+	transcript5760.chr17.nnic@MFSD11	transcript5760.chr17.nnic	protein_coding	76738001,76738282,76738938,76740957,76741969,76742177,76743398,76744322,76744575	76738165,76738448,76738993,76741064,76742048,76742273,76743456,76744466,76745432	Gene ID= ENSG00000092931.11 TPM= 1.93 Transcript Type= NA
chr17	76738071	76778727	76738071	76778727	+	ENST00000590514.5@MFSD11	ENST00000590514.5	protein_coding	76738071,76738282,76738938,76740957,76741969,76742177,76743398,76744322,76754047,76767386,76769746,76774997,76776406,76778188	76738165,76738448,76738993,76741064,76742048,76742273,76743456,76744466,76754087,76767451,76769871,76775171,76776541,76778727	Gene ID= ENSG00000092931.11 TPM= 1.93 Transcript Type= protein_coding
chr17	77088673	77094990	77088673	77094990	+	ENST00000434411.5@SNHG20	ENST00000434411.5	processed_transcript	77088673,77089153,77093244	77088949,77089271,77094990	Gene ID= ENSG00000234912.11 TPM= 13.51 Transcript Type= sense_overlapping
chr17	77088749	77094983	77088749	77094983	+	ENST00000565256.1@SNHG20	ENST00000565256.1	processed_transcript	77088749,77089153,77094070	77088949,77089271,77094983	Gene ID= ENSG00000234912.11 TPM= 1.45 Transcript Type= lincRNA
chr17	77088749	77094983	77088749	77094983	+	ENST00000566583.5@SNHG20	ENST00000566583.5	processed_transcript	77088749,77089153,77093244,77094070	77088949,77089271,77093347,77094983	Gene ID= ENSG00000234912.11 TPM= 6.27 Transcript Type= sense_overlapping
chr17	77140904	77217101	77140904	77217101	+	transcript5801.chr17.nnic@SEC14L1	transcript5801.chr17.nnic	protein_coding	77140904,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77216549	77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77217101	Gene ID= ENSG00000129657.14 TPM= 3.86 Transcript Type= NA
chr17	77140932	77214329	77140932	77214329	+	ENST00000585618.5@SEC14L1	ENST00000585618.5	protein_coding	77140932,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918	77141054,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77214329	Gene ID= ENSG00000129657.14 TPM= 8.69 Transcript Type= protein_coding
chr17	77140993	77201066	77140993	77201066	+	transcript5804.chr17.nic@SEC14L1	transcript5804.chr17.nic	protein_coding	77140993,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484	77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77201066	Gene ID= ENSG00000129657.14 TPM= 1.93 Transcript Type= NA
chr17	77214057	77217088	77214057	77217088	+	transcript5809.chr17.nnic@SEC14L1	transcript5809.chr17.nnic	protein_coding	77214057,77216115	77216075,77217088	Gene ID= ENSG00000129657.14 TPM= 3.86 Transcript Type= NA
chr17	77141032	77217101	77141032	77217101	+	ENST00000443798.8@SEC14L1	ENST00000443798.8	protein_coding	77141032,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216549	77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77214019,77217101	Gene ID= ENSG00000129657.14 TPM= 26.06 Transcript Type= protein_coding
chr17	77281410	77500592	77281410	77500592	+	ENST00000427177.5@SEPT9	ENST00000427177.5	protein_coding	77281410,77307141,77402059,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523	77281554,77307197,77402703,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500592	Gene ID= ENSG00000184640.17 TPM= 23.89 Transcript Type= protein_coding
chr17	77287891	77500592	77287891	77500592	+	ENST00000449803.6@SEPT9	ENST00000449803.6	protein_coding	77287891,77307141,77402059,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523	77288210,77307197,77402703,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500592	Gene ID= ENSG00000184640.17 TPM= 23.89 Transcript Type= protein_coding
chr17	77450737	77500594	77450737	77500594	+	ENST00000541152.6@SEPT9	ENST00000541152.6	protein_coding	77450737,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523	77450786,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500594	Gene ID= ENSG00000184640.17 TPM= 19.87 Transcript Type= protein_coding
chr17	77319524	77492667	77319524	77492667	+	transcript5816.chr17.nic@SEPT9	transcript5816.chr17.nic	protein_coding	77319524,77402059,77482144,77487424,77488240,77488727,77490742,77492621	77320348,77402703,77482335,77487552,77488321,77488864,77490859,77492667	Gene ID= ENSG00000184640.17 TPM= 2.82 Transcript Type= NA
chr17	77958613	78004229	77958613	78004229	+	transcript5822.chr17.nic@TNRC6C	transcript5822.chr17.nic	protein_coding	77958613,78004170	77959268,78004229	Gene ID= ENSG00000078687.17 TPM= 4.83 Transcript Type= NA
chr17	78086502	78106037	78086502	78106037	+	transcript5823.chr17.nic@TNRC6C	transcript5823.chr17.nic	protein_coding	78086502,78086853,78091440,78092933,78093620,78097745,78098343,78102474,78103414,78104485	78086586,78087093,78091607,78093124,78093763,78097861,78098537,78102544,78103553,78106037	Gene ID= ENSG00000078687.17 TPM= 1.93 Transcript Type= NA
chr17	78168558	78173527	78168558	78173527	+	ENST00000225777.7@SYNGR2	ENST00000225777.7	protein_coding	78168558,78170817,78171510,78171739	78168715,78171054,78171649,78173527	Gene ID= ENSG00000108639.7 TPM= 11.34 Transcript Type= protein_coding
chr17	78168604	78173527	78168604	78173527	+	ENST00000589711.1@SYNGR2	ENST00000589711.1	protein_coding	78168604,78171510,78171739	78168715,78171649,78173527	Gene ID= ENSG00000108639.7 TPM= 1.21 Transcript Type= protein_coding
chr17	78168611	78172719	78168611	78172719	+	ENST00000588282.5@SYNGR2	ENST00000588282.5	protein_coding	78168611,78170817,78171510	78168715,78171054,78172719	Gene ID= ENSG00000108639.7 TPM= 3.14 Transcript Type= protein_coding
chr17	78174075	78187233	78174075	78187233	-	ENST00000301634.11@TK1	ENST00000301634.11	protein_coding	78186929,78186787,78185055,78182589,78175529,78175050,78174075	78187233,78186818,78185165,78182682,78175618,78175169,78174950	Gene ID= ENSG00000167900.11 TPM= 2.9 Transcript Type= protein_coding
chr17	78356778	78360077	78356778	78360077	-	ENST00000330871.3@SOCS3	ENST00000330871.3	protein_coding	78359750,78356778	78360077,78359183	Gene ID= ENSG00000184557.4 TPM= 178.58 Transcript Type= protein_coding
chr17	78378649	78424554	78378649	78424554	+	transcript5859.chr17.nic@PGS1	transcript5859.chr17.nic	protein_coding	78378649,78382664,78392476,78396308,78398252,78399348,78400677,78403568,78414879,78419546,78424061	78378808,78382785,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78424554	Gene ID= ENSG00000087157.18 TPM= 1.93 Transcript Type= NA
chr17	78378640	78424554	78378640	78424554	+	ENST00000262764.10@PGS1	ENST00000262764.10	protein_coding	78378640,78392476,78396308,78398252,78399348,78400677,78403568,78414879,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78424554	Gene ID= ENSG00000087157.18 TPM= 6.76 Transcript Type= protein_coding
chr17	78378640	78424656	78378640	78424656	+	transcript5867.chr17.nic@PGS1	transcript5867.chr17.nic	protein_coding	78378640,78392476,78396308,78398252,78399348,78400677,78403568,78414952,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78424656	Gene ID= ENSG00000087157.18 TPM= 1.93 Transcript Type= NA
chr17	78378649	78424557	78378649	78424557	+	transcript5868.chr17.nic@PGS1	transcript5868.chr17.nic	protein_coding	78378649,78382664,78392476,78396308,78398252,78399348,78400677,78403568,78419546,78424061	78378808,78382785,78392665,78396385,78398351,78399537,78400855,78404089,78419725,78424557	Gene ID= ENSG00000087157.18 TPM= 1.93 Transcript Type= NA
chr17	78378640	78424656	78378640	78424656	+	transcript5872.chr17.nic@PGS1	transcript5872.chr17.nic	protein_coding	78378640,78392476,78396308,78398252,78399348,78400677,78403568,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78419675,78424656	Gene ID= ENSG00000087157.18 TPM= 1.93 Transcript Type= NA
chr17	78378640	78424557	78378640	78424557	+	transcript5873.chr17.nic@PGS1	transcript5873.chr17.nic	protein_coding	78378640,78392476,78396308,78398252,78399348,78400677,78403568,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78419725,78424557	Gene ID= ENSG00000087157.18 TPM= 1.93 Transcript Type= NA
chr17	78674048	78782272	78674048	78782272	-	ENST00000591455.5@CYTH1	ENST00000591455.5	protein_coding	78782202,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698269,78692417,78680971,78680190,78674048	78782272,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692493,78681042,78680344,78676169	Gene ID= ENSG00000108669.16 TPM= 10.62 Transcript Type= protein_coding
chr17	78674048	78782294	78674048	78782294	-	ENST00000361101.8@CYTH1	ENST00000361101.8	protein_coding	78782202,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698268,78692417,78680971,78680190,78674048	78782294,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692495,78681042,78680344,78676169	Gene ID= ENSG00000108669.16 TPM= 9.65 Transcript Type= protein_coding
chr17	78802461	78840864	78802461	78840864	-	ENST00000588086.5@USP36	ENST00000588086.5	protein_coding	78840736,78838587,78836111,78835280,78828897,78827245,78821937,78820991,78819930,78818667,78814412,78813773,78812860,78806959,78806156,78803385,78802461	78840864,78838750,78836372,78835501,78829007,78827347,78822004,78821061,78820012,78818778,78814552,78813873,78813001,78807636,78806286,78803978,78802535	Gene ID= ENSG00000055483.19 TPM= 9.65 Transcript Type= non_stop_decay
chr17	78971238	78980109	78971238	78980109	-	ENST00000262776.7@LGALS3BP	ENST00000262776.7	protein_coding	78979824,78977140,78975965,78974688,78972970,78971238	78980109,78977214,78976156,78974819,78973222,78972704	Gene ID= ENSG00000108679.12 TPM= 18.34 Transcript Type= protein_coding
chr17	78991720	79009792	78991720	79009792	-	transcript5892.chr17.nic@CANT1	transcript5892.chr17.nic	protein_coding	79009664,78997840,78996992,78995018,78992410,78991720	79009792,78997963,78997644,78995221,78993920,78992140	Gene ID= ENSG00000171302.16 TPM= 2.9 Transcript Type= NA
chr17	78991717	79009817	78991717	79009817	-	ENST00000302345.6@CANT1	ENST00000302345.6	protein_coding	79009664,78996992,78995018,78991717	79009817,78997963,78995221,78993920	Gene ID= ENSG00000171302.16 TPM= 7.24 Transcript Type= protein_coding
chr17	78991717	79009730	78991717	79009730	-	ENST00000392446.9@CANT1	ENST00000392446.9	protein_coding	79009664,78997840,78996992,78995018,78991717	79009730,78997963,78997644,78995221,78993920	Gene ID= ENSG00000171302.16 TPM= 5.31 Transcript Type= protein_coding
chr17	79080312	79088599	79080312	79088599	+	ENST00000300682.14@ENGASE	ENST00000300682.14	protein_coding	79080312,79080925,79081898,79083020,79083482,79083761,79084538,79085234,79085620,79085933	79080364,79081073,79082877,79083123,79083590,79083951,79084686,79085342,79085734,79088599	Gene ID= ENSG00000167280.16 TPM= 34.75 Transcript Type= nonsense_mediated_decay
chr17	79074945	79086696	79074945	79086696	+	ENST00000579016.5@ENGASE	ENST00000579016.5	protein_coding	79074945,79077430,79077663,79079489,79080207,79080925,79081898,79083020,79083482,79083761,79084538,79085234,79085620,79085933	79075090,79077497,79077864,79079637,79080364,79081073,79082063,79083123,79083590,79083951,79084686,79085342,79085734,79086696	Gene ID= ENSG00000167280.16 TPM= 21.24 Transcript Type= protein_coding
chr17	79833156	79839429	79833156	79839429	-	ENST00000269397.8@CBX4	ENST00000269397.8	protein_coding	79839183,79839011,79837837,79835646,79833156	79839429,79839054,79837902,79835712,79835395	Gene ID= ENSG00000141582.14 TPM= 6.76 Transcript Type= protein_coding
chr17	79935632	79938607	79935632	79938607	-	transcript5914.chr17.nnic@NA	transcript5914.chr17.nnic	NA	79935632	79938607	Gene ID= novel_gene_chr17_5915 TPM= 3.86 Transcript Type= NA
chr17	80101529	80119877	80101529	80119877	+	transcript5924.chr17.nic@GAA	transcript5924.chr17.nic	protein_coding	80101529,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272	80101625,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119877	Gene ID= ENSG00000171298.12 TPM= 27.51 Transcript Type= NA
chr17	80101594	80119877	80101594	80119877	+	ENST00000390015.7@GAA	ENST00000390015.7	protein_coding	80101594,80101811,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272	80101625,80101890,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119877	Gene ID= ENSG00000171298.12 TPM= 28.96 Transcript Type= protein_coding
chr17	80101576	80102736	80101576	80102736	+	transcript5932.chr17.nnic@NA	transcript5932.chr17.nnic	NA	80101576	80102736	Gene ID= novel_gene_chr17_5933 TPM= 2.9 Transcript Type= NA
chr17	80135214	80147183	80135214	80147183	-	ENST00000269349.7@EIF4A3	ENST00000269349.7	protein_coding	80146793,80144172,80141782,80141319,80140008,80139670,80139021,80138142,80137386,80136228,80136004,80135214	80147183,80144244,80141848,80141381,80140140,80139750,80139162,80138280,80137501,80136335,80136131,80135506	Gene ID= ENSG00000141543.9 TPM= 58.88 Transcript Type= protein_coding
chr17	80209264	80220400	80209264	80220400	-	ENST00000326317.10@SGSH	ENST00000326317.10	protein_coding	80220226,80217032,80215033,80214615,80214172,80213804,80212071,80209264	80220400,80217192,80215138,80214765,80214328,80213885,80212274,80211011	Gene ID= ENSG00000181523.12 TPM= 10.94 Transcript Type= protein_coding
chr17	80209278	80220375	80209278	80220375	-	transcript5943.chr17.nnic@SGSH	transcript5943.chr17.nnic	protein_coding	80220226,80217032,80215033,80214615,80214047,80213804,80209278	80220375,80217192,80215138,80214765,80214328,80213885,80212274	Gene ID= ENSG00000181523.12 TPM= 4.66 Transcript Type= NA
chr17	80209278	80214504	80209278	80214504	-	transcript5948.chr17.nic@SGSH	transcript5948.chr17.nic	protein_coding	80213804,80209278	80214504,80212274	Gene ID= ENSG00000181523.12 TPM= 4.66 Transcript Type= NA
chr17	80220430	80253500	80220430	80253500	+	ENST00000361193.7@SLC26A11	ENST00000361193.7	protein_coding	80220430,80220916,80221548,80222655,80223252,80225837,80227818,80236928,80237522,80241771,80245196,80246154,80246509,80248130,80248575,80249154,80251329,80252625	80220496,80221115,80221794,80222847,80223337,80225916,80227960,80237103,80237594,80241821,80245256,80246209,80246649,80248257,80248674,80249287,80251401,80253500	Gene ID= ENSG00000181045.14 TPM= 4.34 Transcript Type= protein_coding
chr17	80220438	80253498	80220438	80253498	+	ENST00000411502.7@SLC26A11	ENST00000411502.7	protein_coding	80220438,80220919,80221548,80222655,80223252,80225837,80227818,80236928,80237522,80241771,80245196,80246154,80246509,80248130,80248575,80249154,80251329,80252625	80220496,80221115,80221794,80222847,80223337,80225916,80227960,80237103,80237594,80241821,80245256,80246209,80246649,80248257,80248674,80249287,80251401,80253498	Gene ID= ENSG00000181045.14 TPM= 2.41 Transcript Type= protein_coding
chr17	80260823	80273404	80260823	80273404	+	transcript5963.chr17.nic@RNF213	transcript5963.chr17.nic	protein_coding	80260823,80263574,80273241	80260902,80263778,80273404	Gene ID= ENSG00000173821.19 TPM= 1.93 Transcript Type= NA
chr17	80260868	80398786	80260868	80398786	+	ENST00000582970.5@RNF213	ENST00000582970.5	protein_coding	80260868,80263574,80273241,80287815,80288633,80289659,80290570,80291628,80294720,80295557,80298321,80306252,80307128,80309018,80313012,80317188,80319190,80325030,80327816,80328328,80332006,80334105,80336161,80337586,80337833,80339201,80343132,80343857,80344678,80349770,80350301,80351685,80352940,80353512,80354019,80354441,80358288,80360061,80361734,80363102,80363609,80364433,80367748,80367961,80369502,80369768,80371874,80372521,80372975,80374458,80375760,80376301,80376882,80377762,80379620,80380831,80381547,80382979,80383677,80385039,80385538,80386250,80386690,80388612,80389173,80389828,80390012,80393345	80260902,80263778,80273404,80288363,80288755,80289837,80290728,80291827,80295003,80295813,80298518,80306468,80307201,80309171,80313167,80317277,80319312,80325198,80327989,80328477,80332631,80334270,80336378,80337726,80337997,80340356,80343325,80344015,80348286,80349906,80350396,80351803,80353059,80353666,80354166,80354576,80358479,80360206,80361888,80363314,80363790,80364553,80367848,80368143,80369671,80369867,80371985,80372734,80373165,80374589,80375870,80376543,80376963,80377796,80379714,80380987,80381727,80383070,80383928,80385171,80385621,80386430,80386891,80388689,80389367,80389917,80390196,80398786	Gene ID= ENSG00000173821.19 TPM= 1.93 Transcript Type= protein_coding
chr17	80415167	80430343	80415167	80430343	+	transcript5968.chr17.nic@ENDOV	transcript5968.chr17.nic	protein_coding	80415167,80415650,80421828,80422206,80423520,80425032,80425492,80428596,80429773,80430041	80415250,80415821,80421962,80422245,80423632,80425100,80425620,80428660,80429831,80430343	Gene ID= ENSG00000173818.16 TPM= 1.93 Transcript Type= NA
chr17	80415180	80438086	80415180	80438086	+	transcript5976.chr17.nic@ENDOV	transcript5976.chr17.nic	protein_coding	80415180,80422206,80423520,80425032,80425492,80428596,80429773,80436133	80415821,80422245,80423632,80425100,80425620,80428660,80429831,80438086	Gene ID= ENSG00000173818.16 TPM= 2.65 Transcript Type= NA
chr17	80415452	80438086	80415452	80438086	+	ENST00000517795.5@ENDOV	ENST00000517795.5	protein_coding	80415452,80423520,80425032,80425492,80428596,80429773,80436133	80415610,80423632,80425100,80425620,80428660,80429831,80438086	Gene ID= ENSG00000173818.16 TPM= 1.69 Transcript Type= protein_coding
chr17	80423262	80430343	80423262	80430343	+	transcript5981.chr17.nnic@ENDOV	transcript5981.chr17.nnic	protein_coding	80423262,80423520,80425032,80425492,80428596,80429773,80430041	80423440,80423632,80425100,80425620,80428660,80429831,80430343	Gene ID= ENSG00000173818.16 TPM= 1.93 Transcript Type= NA
chr17	80415167	80438081	80415167	80438081	+	ENST00000520367.5@ENDOV	ENST00000520367.5	protein_coding	80415167,80415650,80422206,80423520,80425032,80425492,80428596,80429773,80436133	80415250,80415821,80422245,80423632,80425100,80425620,80428660,80429831,80438081	Gene ID= ENSG00000173818.16 TPM= 3.62 Transcript Type= protein_coding
chr17	80415184	80430343	80415184	80430343	+	ENST00000323854.9@ENDOV	ENST00000323854.9	protein_coding	80415184,80415650,80422206,80423520,80425032,80425492,80428596,80429773	80415250,80415821,80422245,80423632,80425100,80425620,80428660,80430343	Gene ID= ENSG00000173818.16 TPM= 2.9 Transcript Type= protein_coding
chr17	80415167	80438081	80415167	80438081	+	ENST00000518137.5@ENDOV	ENST00000518137.5	protein_coding	80415167,80415650,80421828,80422206,80423520,80425032,80425492,80428596,80429773,80436133	80415250,80415821,80421962,80422245,80423632,80425100,80425620,80428660,80429831,80438081	Gene ID= ENSG00000173818.16 TPM= 1.69 Transcript Type= protein_coding
chr17	80416988	80418837	80416988	80418837	+	transcript5985.chr17.nnic@NA	transcript5985.chr17.nnic	NA	80416988	80418837	Gene ID= novel_gene_chr17_5986 TPM= 1.93 Transcript Type= NA
chr17	80454816	80455647	80454816	80455647	+	transcript5987.chr17.nnic@NA	transcript5987.chr17.nnic	NA	80454816	80455647	Gene ID= novel_gene_chr17_5988 TPM= 12.55 Transcript Type= NA
chr17	80743278	80898576	80743278	80898576	+	transcript5990.chr17.nnic@RPTOR	transcript5990.chr17.nnic	protein_coding	80743278,80754010,80791450,80822201,80823079,80837922,80846473,80855464,80857790,80880415,80883419,80883781,80885008,80891720,80892729,80893707,80898521	80743427,80754185,80791509,80822301,80823223,80837997,80846574,80855547,80857900,80880489,80883484,80883972,80885148,80891837,80892869,80893865,80898576	Gene ID= ENSG00000141564.13 TPM= 3.86 Transcript Type= NA
chr17	80743318	80755758	80743318	80755758	+	transcript5994.chr17.nic@RPTOR	transcript5994.chr17.nic	protein_coding	80743318,80754010	80743427,80755758	Gene ID= ENSG00000141564.13 TPM= 3.86 Transcript Type= NA
chr17	80743287	80966371	80743287	80966371	+	ENST00000575542.5@RPTOR	ENST00000575542.5	protein_coding	80743287,80754010,80791450,80822201,80823079,80837922,80846473,80855464,80857790,80880415,80883419,80883781,80885008,80891720,80892729,80893707,80908811,80922724,80923490,80925370,80940496,80945667,80947227,80949443,80957624,80960078,80961394,80962461,80962928,80964262	80743427,80754185,80791509,80822301,80823223,80837997,80846574,80855547,80857900,80880489,80883484,80883972,80885148,80891837,80892869,80893865,80908929,80922827,80923673,80925480,80940601,80945781,80947351,80949547,80957730,80960205,80961480,80962577,80963057,80966371	Gene ID= ENSG00000141564.13 TPM= 60.81 Transcript Type= processed_transcript
chr17	80711746	80714348	80711746	80714348	-	transcript5995.chr17.nnic@NA	transcript5995.chr17.nnic	NA	80711746	80714348	Gene ID= novel_gene_chr17_5996 TPM= 2.9 Transcript Type= NA
chr17	80991883	81000133	80991883	81000133	+	transcript5997.chr17.nnic@CHMP6	transcript5997.chr17.nnic	protein_coding	80991883,80992506,80994581,80995019,80995672,80997007,80997261,80998366,80999098	80991981,80992611,80994690,80995106,80995758,80997072,80997341,80998420,81000133	Gene ID= ENSG00000176108.9 TPM= 5.15 Transcript Type= NA
chr17	80991841	81000133	80991841	81000133	+	ENST00000325167.9@CHMP6	ENST00000325167.9	protein_coding	80991841,80994581,80995019,80995672,80997007,80997261,80998366,80999098	80991981,80994690,80995106,80995758,80997072,80997341,80998420,81000133	Gene ID= ENSG00000176108.9 TPM= 170.21 Transcript Type= protein_coding
chr17	81035151	81116225	81035151	81116225	+	ENST00000428708.6@BAIAP2	ENST00000428708.6	protein_coding	81035151,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81115770	81035308,81053743,81057967,81084893,81085725,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81116225	Gene ID= ENSG00000175866.15 TPM= 12.55 Transcript Type= protein_coding
chr17	81057656	81116225	81057656	81116225	+	transcript6008.chr17.nic@BAIAP2	transcript6008.chr17.nic	protein_coding	81057656,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81115770	81057794,81057967,81084893,81085725,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81116225	Gene ID= ENSG00000175866.15 TPM= 11.58 Transcript Type= NA
chr17	81120785	81123591	81120785	81123591	+	transcript6010.chr17.nnic@NA	transcript6010.chr17.nnic	NA	81120785	81123591	Gene ID= novel_gene_chr17_6011 TPM= 1.93 Transcript Type= NA
chr17	81228279	81239059	81228279	81239059	-	transcript6021.chr17.nnic@TEPSIN	transcript6021.chr17.nnic	protein_coding	81238514,81238002,81237387,81236980,81236708,81233981,81233638,81233432,81231847,81231578,81231398,81230544,81228279	81239059,81238159,81237459,81237071,81236801,81234048,81233716,81233503,81232021,81231691,81231476,81230678,81229476	Gene ID= ENSG00000167302.10 TPM= 2.9 Transcript Type= NA
chr17	81228277	81239091	81228277	81239091	-	ENST00000300714.7@TEPSIN	ENST00000300714.7	protein_coding	81238986,81237387,81236980,81236708,81233981,81233638,81233432,81231847,81231578,81231398,81230544,81228277	81239091,81237459,81237071,81236801,81234048,81233716,81233503,81232021,81231691,81231476,81230678,81229476	Gene ID= ENSG00000167302.10 TPM= 1.93 Transcript Type= protein_coding
chr17	81228279	81238962	81228279	81238962	-	transcript6028.chr17.nic@TEPSIN	transcript6028.chr17.nic	protein_coding	81237387,81236980,81236708,81233981,81233638,81233432,81232315,81231847,81231398,81230544,81228279	81238962,81237071,81236801,81234048,81233716,81233503,81232518,81232021,81231691,81230678,81229476	Gene ID= ENSG00000167302.10 TPM= 2.9 Transcript Type= NA
chr17	81239239	81241281	81239239	81241281	+	ENST00000431388.2@NDUFAF8	ENST00000431388.2	protein_coding	81239239,81239568,81240987	81239447,81239678,81241281	Gene ID= ENSG00000224877.3 TPM= 56.95 Transcript Type= protein_coding
chr17	81245000	81295343	81245000	81295343	-	transcript6031.chr17.nic@SLC38A10	transcript6031.chr17.nic	protein_coding	81294823,81289691,81284850,81283409,81282189,81280609,81277031,81275969,81272516,81270918,81260238,81253073,81252195,81251493,81250070,81246885,81245000	81295343,81289808,81284895,81283502,81282332,81280733,81277133,81276151,81272627,81271024,81260394,81253240,81252683,81251612,81250093,81247061,81246673	Gene ID= ENSG00000157637.12 TPM= 44.89 Transcript Type= NA
chr17	81250877	81295343	81250877	81295343	-	transcript6041.chr17.nnic@SLC38A10	transcript6041.chr17.nnic	protein_coding	81294823,81289691,81284850,81283409,81282189,81280609,81277031,81275969,81272516,81270918,81260238,81253073,81252195,81251293,81250877	81295343,81289808,81284895,81283502,81282332,81280733,81277133,81276151,81272627,81271024,81260394,81253240,81252683,81251612,81251231	Gene ID= ENSG00000157637.12 TPM= 1.93 Transcript Type= NA
chr17	81245000	81295305	81245000	81295305	-	ENST00000374759.7@SLC38A10	ENST00000374759.7	protein_coding	81294823,81289691,81284850,81283409,81282189,81280609,81277031,81275969,81272516,81270918,81260238,81253073,81252195,81251493,81246885,81245000	81295305,81289808,81284895,81283502,81282332,81280733,81277133,81276151,81272627,81271024,81260394,81253240,81252683,81251612,81247061,81246673	Gene ID= ENSG00000157637.12 TPM= 26.55 Transcript Type= protein_coding
chr17	81302822	81303937	81302822	81303937	-	transcript6047.chr17.nnic@NA	transcript6047.chr17.nnic	NA	81302822	81303937	Gene ID= novel_gene_chr17_6048 TPM= 1.93 Transcript Type= NA
chr17	81307645	81309327	81307645	81309327	-	transcript6049.chr17.nic@LINC00482	transcript6049.chr17.nic	lincRNA	81309185,81307645	81309327,81307844	Gene ID= ENSG00000185168.5 TPM= 7.72 Transcript Type= NA
chr17	81327579	81329470	81327579	81329470	-	transcript6054.chr17.nnic@NA	transcript6054.chr17.nnic	NA	81327579	81329470	Gene ID= novel_gene_chr17_6055 TPM= 3.86 Transcript Type= NA
chr17	81328753	81332836	81328753	81332836	+	transcript6052.chr17.nnic@NA	transcript6052.chr17.nnic	NA	81328753	81332836	Gene ID= novel_gene_chr17_6053 TPM= 2.9 Transcript Type= NA
chr17	81340220	81342037	81340220	81342037	-	transcript6056.chr17.nnic@NA	transcript6056.chr17.nnic	NA	81340220	81342037	Gene ID= novel_gene_chr17_6057 TPM= 1.93 Transcript Type= NA
chr17	81345533	81346081	81345533	81346081	-	transcript6058.chr17.nnic@NA	transcript6058.chr17.nnic	NA	81345533	81346081	Gene ID= novel_gene_chr17_6059 TPM= 12.55 Transcript Type= NA
chr17	81509971	81512801	81509971	81512801	-	transcript6092.chr17.nnic@NA	transcript6092.chr17.nnic	NA	81509971	81512801	Gene ID= novel_gene_chr17_6093 TPM= 7.52 Transcript Type= NA
chr17	81509971	81512874	81509971	81512874	-	ENST00000331925.6@ACTG1	ENST00000331925.6	protein_coding	81512734,81512232,81511903,81511188,81510927,81509971	81512874,81512360,81512142,81511626,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 426.9 Transcript Type= protein_coding
chr17	81509971	81512851	81509971	81512851	-	transcript6079.chr17.nic@ACTG1	transcript6079.chr17.nic	protein_coding	81512734,81512232,81511903,81511188,81510927,81509971	81512851,81512360,81512142,81511803,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 86.14 Transcript Type= NA
chr17	81510013	81512791	81510013	81512791	-	ENST00000576544.5@ACTG1	ENST00000576544.5	protein_coding	81512734,81512232,81511903,81511188,81510927,81510479,81510013	81512791,81512360,81512142,81511626,81511108,81510833,81510329	Gene ID= ENSG00000184009.9 TPM= 1.06 Transcript Type= nonsense_mediated_decay
chr17	81509999	81511848	81509999	81511848	-	ENST00000574671.5@ACTG1	ENST00000574671.5	protein_coding	81511188,81510927,81509999	81511848,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 5.03 Transcript Type= retained_intron
chr17	81509988	81512780	81509988	81512780	-	ENST00000573283.5@ACTG1	ENST00000573283.5	protein_coding	81512615,81512232,81511903,81511188,81510927,81509988	81512780,81512360,81512142,81511626,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 4.28 Transcript Type= protein_coding
chr17	81509989	81512781	81509989	81512781	-	ENST00000575842.5@ACTG1	ENST00000575842.5	protein_coding	81512232,81511903,81511188,81510927,81509989	81512781,81512142,81511626,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 3.31 Transcript Type= protein_coding
chr17	81515034	81516410	81515034	81516410	+	transcript6094.chr17.nnic@NA	transcript6094.chr17.nnic	NA	81515034	81516410	Gene ID= novel_gene_chr17_6095 TPM= 2.9 Transcript Type= NA
chr17	81539886	81549073	81539886	81549073	-	transcript6136.chr17.nic@FAAP100	transcript6136.chr17.nic	protein_coding	81545746,81544004,81541309,81539886	81549073,81544120,81541395,81540950	Gene ID= ENSG00000185504.16 TPM= 24.13 Transcript Type= NA
chr17	81539885	81552377	81539885	81552377	-	ENST00000327787.12@FAAP100	ENST00000327787.12	protein_coding	81552166,81551928,81550248,81549206,81546909,81545746,81544004,81541309,81539885	81552377,81552052,81551203,81549362,81547678,81545882,81544120,81541395,81540950	Gene ID= ENSG00000185504.16 TPM= 14.8 Transcript Type= protein_coding
chr17	81539885	81552376	81539885	81552376	-	ENST00000443656.6@FAAP100	ENST00000443656.6	protein_coding	81552166,81551732,81550248,81549206,81546909,81545746,81544004,81541309,81539885	81552376,81552052,81551203,81549362,81547678,81545882,81544120,81541395,81540950	Gene ID= ENSG00000185504.16 TPM= 8.04 Transcript Type= nonsense_mediated_decay
chr17	81539886	81548498	81539886	81548498	-	ENST00000425898.2@FAAP100	ENST00000425898.2	protein_coding	81546909,81545746,81544004,81541309,81539886	81548498,81545882,81544120,81541395,81540950	Gene ID= ENSG00000185504.16 TPM= 30.24 Transcript Type= protein_coding
chr17	81556887	81637087	81556887	81637087	-	transcript6097.chr17.nic@NPLOC4	transcript6097.chr17.nic	protein_coding	81636916,81629725,81622166,81613318,81610210,81608728,81606691,81604548,81600341,81597245,81596116,81588944,81572017,81569016,81567417,81565505,81563921,81556887	81637087,81629805,81622278,81613494,81610258,81608822,81606814,81604727,81600427,81597316,81596242,81589104,81572088,81569111,81567533,81565607,81563979,81559416	Gene ID= ENSG00000182446.13 TPM= 9.02 Transcript Type= NA
chr17	81556887	81637146	81556887	81637146	-	ENST00000331134.10@NPLOC4	ENST00000331134.10	protein_coding	81636916,81629725,81622166,81613318,81610210,81608728,81606691,81604548,81600341,81597245,81596116,81588944,81572017,81569016,81567417,81565505,81556887	81637146,81629805,81622278,81613494,81610258,81608822,81606814,81604727,81600427,81597316,81596242,81589104,81572088,81569111,81567533,81565607,81559416	Gene ID= ENSG00000182446.13 TPM= 441.48 Transcript Type= protein_coding
chr17	81562957	81564803	81562957	81564803	+	transcript6138.chr17.nnic@NA	transcript6138.chr17.nnic	NA	81562957	81564803	Gene ID= novel_gene_chr17_6139 TPM= 4.83 Transcript Type= NA
chr17	81600100	81602669	81600100	81602669	-	transcript6142.chr17.nnic@NA	transcript6142.chr17.nnic	NA	81600100	81602669	Gene ID= novel_gene_chr17_6143 TPM= 1.93 Transcript Type= NA
chr17	81636138	81637093	81636138	81637093	-	transcript6144.chr17.nnic@NA	transcript6144.chr17.nnic	NA	81636138	81637093	Gene ID= novel_gene_chr17_6145 TPM= 1.93 Transcript Type= NA
chr17	81665036	81666635	81665036	81666635	-	ENST00000575963.1@OXLD1	ENST00000575963.1	protein_coding	81665036	81666635	Gene ID= ENSG00000204237.4 TPM= 21.24 Transcript Type= retained_intron
chr17	81665036	81666588	81665036	81666588	-	ENST00000374741.3@OXLD1	ENST00000374741.3	protein_coding	81666518,81665036	81666588,81665584	Gene ID= ENSG00000204237.4 TPM= 11.58 Transcript Type= protein_coding
chr17	81666364	81673899	81666364	81673899	+	ENST00000329214.12@CCDC137	ENST00000329214.12	protein_coding	81666364,81667729,81670225,81671744,81672076,81672495	81666900,81667862,81670453,81671826,81672155,81673899	Gene ID= ENSG00000185298.12 TPM= 43.44 Transcript Type= protein_coding
chr17	81681187	81683796	81681187	81683796	-	transcript6152.chr17.nic@ARL16	transcript6152.chr17.nic	protein_coding	81683693,81683536,81683013,81682491,81682034,81681187	81683796,81683594,81683126,81682675,81682149,81681879	Gene ID= ENSG00000214087.8 TPM= 3.14 Transcript Type= NA
chr17	81681187	81683796	81681187	81683796	-	transcript6153.chr17.nnic@ARL16	transcript6153.chr17.nnic	protein_coding	81683693,81683536,81682491,81682034,81681187	81683796,81683594,81682675,81682149,81681879	Gene ID= ENSG00000214087.8 TPM= 2.17 Transcript Type= NA
chr17	81681174	81683924	81681174	81683924	-	ENST00000397498.8@ARL16	ENST00000397498.8	protein_coding	81683693,81683536,81683013,81682034,81681174	81683924,81683594,81683126,81682149,81681879	Gene ID= ENSG00000214087.8 TPM= 9.89 Transcript Type= protein_coding
chr17	81681187	81683796	81681187	81683796	-	transcript6156.chr17.nic@ARL16	transcript6156.chr17.nic	protein_coding	81683693,81683536,81682034,81681187	81683796,81683594,81682149,81681879	Gene ID= ENSG00000214087.8 TPM= 4.1 Transcript Type= NA
chr17	81683994	81702119	81683994	81702119	+	transcript6166.chr17.nnic@HGS	transcript6166.chr17.nnic	protein_coding	81683994,81685605,81686312,81687003,81688704,81690182,81690674,81691447,81693503,81693654,81693870,81694815,81694924,81695164,81695786,81696357,81696607,81696824,81700467,81700695,81701045,81701508	81684103,81685689,81686387,81687095,81688827,81690234,81690742,81691571,81693581,81693752,81693965,81694853,81695067,81695223,81696041,81696529,81696747,81696998,81700600,81700814,81701131,81702119	Gene ID= ENSG00000185359.12 TPM= 7.69 Transcript Type= NA
chr17	81683932	81702119	81683932	81702119	+	ENST00000329138.8@HGS	ENST00000329138.8	protein_coding	81683932,81685605,81686312,81687003,81688704,81690182,81690674,81691447,81693503,81693654,81693870,81694815,81694924,81695164,81695786,81696357,81696607,81696824,81700467,81700695,81701045,81701508	81684103,81685689,81686387,81687095,81688827,81690234,81690742,81691571,81693581,81693752,81693965,81694853,81695067,81695223,81695999,81696529,81696747,81696998,81700600,81700814,81701131,81702119	Gene ID= ENSG00000185359.12 TPM= 137.53 Transcript Type= protein_coding
chr17	81701324	81703300	81701324	81703300	-	ENST00000575312.1@AC139530.1	ENST00000575312.1	antisense_RNA	81701324	81703300	Gene ID= ENSG00000262049.1 TPM= 14.48 Transcript Type= antisense_RNA
chr17	81703357	81707526	81703357	81707526	+	ENST00000333676.7@MRPL12	ENST00000333676.7	protein_coding	81703357,81704244,81704633,81706906,81707124	81703575,81704430,81704716,81707040,81707526	Gene ID= ENSG00000262814.7 TPM= 185.34 Transcript Type= protein_coding
chr17	81709335	81712207	81709335	81712207	-	transcript6190.chr17.nnic@NA	transcript6190.chr17.nnic	NA	81709335	81712207	Gene ID= novel_gene_chr17_6191 TPM= 4.83 Transcript Type= NA
chr17	81712341	81721012	81712341	81721012	+	ENST00000350690.9@SLC25A10	ENST00000350690.9	protein_coding	81712341,81714953,81715478,81715693,81716009,81716812,81717002,81717399,81717784,81719831,81719976	81712519,81715072,81715592,81715741,81716050,81716855,81717072,81717491,81717861,81719887,81721012	Gene ID= ENSG00000183048.11 TPM= 7.72 Transcript Type= protein_coding
chr17	81822417	81833291	81822417	81833291	-	ENST00000538396.5@MCRIP1	ENST00000538396.5	protein_coding	81833238,81824499,81824287,81823412,81823209,81822417	81833291,81824554,81824405,81823513,81823311,81822907	Gene ID= ENSG00000225663.7 TPM= 7.72 Transcript Type= protein_coding
chr17	81822429	81833302	81822429	81833302	-	ENST00000573478.5@MCRIP1	ENST00000573478.5	protein_coding	81833238,81824499,81824287,81822429	81833302,81824554,81824405,81823311	Gene ID= ENSG00000225663.7 TPM= 1.45 Transcript Type= protein_coding
chr17	81822411	81833268	81822411	81833268	-	ENST00000455127.6@MCRIP1	ENST00000455127.6	protein_coding	81833238,81824499,81824287,81823412,81822411	81833268,81824554,81824405,81823513,81823311	Gene ID= ENSG00000225663.7 TPM= 26.55 Transcript Type= protein_coding
chr17	81833492	81835033	81833492	81835033	-	ENST00000330261.4@PPP1R27	ENST00000330261.4	protein_coding	81834764,81834503,81833492	81835033,81834653,81833852	Gene ID= ENSG00000182676.4 TPM= 2579.31 Transcript Type= protein_coding
chr17	81833498	81835050	81833498	81835050	-	ENST00000570394.1@PPP1R27	ENST00000570394.1	protein_coding	81834764,81833498	81835050,81834653	Gene ID= ENSG00000182676.4 TPM= 48.27 Transcript Type= protein_coding
chr17	81843159	81860694	81843159	81860694	-	ENST00000331483.8@P4HB	ENST00000331483.8	protein_coding	81860327,81859181,81855453,81855142,81847243,81846947,81846429,81845871,81845561,81845144,81843159	81860694,81859387,81855586,81855279,81847347,81847072,81846629,81845991,81845742,81845230,81844092	Gene ID= ENSG00000185624.14 TPM= 948.25 Transcript Type= protein_coding
chr17	81867721	81871391	81867721	81871391	-	transcript6259.chr17.nnic@ARHGDIA	transcript6259.chr17.nnic	protein_coding	81871298,81869741,81869542,81869330,81869173,81869048,81867721	81871391,81869957,81869625,81869406,81869236,81869075,81868969	Gene ID= ENSG00000141522.11 TPM= 32.34 Transcript Type= NA
chr17	81867721	81871406	81867721	81871406	-	ENST00000269321.11@ARHGDIA	ENST00000269321.11	protein_coding	81871298,81869741,81869542,81869330,81869173,81867721	81871406,81869957,81869625,81869406,81869236,81869075	Gene ID= ENSG00000141522.11 TPM= 86.4 Transcript Type= protein_coding
chr17	81887844	81891586	81887844	81891586	-	ENST00000505490.2@ALYREF	ENST00000505490.2	protein_coding	81891323,81890689,81889182,81888520,81888241,81887844	81891586,81890820,81889329,81888583,81888418,81888145	Gene ID= ENSG00000183684.7 TPM= 115.84 Transcript Type= protein_coding
chr17	81891720	81900252	81891720	81900252	+	ENST00000579978.5@ANAPC11	ENST00000579978.5	protein_coding	81891720,81894467,81899920	81891841,81894586,81900252	Gene ID= ENSG00000141552.17 TPM= 36.68 Transcript Type= protein_coding
chr17	81891735	81900356	81891735	81900356	+	ENST00000572851.6@ANAPC11	ENST00000572851.6	protein_coding	81891735,81894467,81899920	81891863,81894586,81900356	Gene ID= ENSG00000141552.17 TPM= 10.62 Transcript Type= protein_coding
chr17	81891746	81900254	81891746	81900254	+	ENST00000571874.6@ANAPC11	ENST00000571874.6	protein_coding	81891746,81893552,81894467,81899920	81891863,81893614,81894586,81900254	Gene ID= ENSG00000141552.17 TPM= 150.59 Transcript Type= protein_coding
chr17	81891760	81900254	81891760	81900254	+	ENST00000577747.5@ANAPC11	ENST00000577747.5	protein_coding	81891760,81893104,81893552,81894467,81899920	81891829,81893187,81893614,81894586,81900254	Gene ID= ENSG00000141552.17 TPM= 2.9 Transcript Type= protein_coding
chr17	81891732	81900356	81891732	81900356	+	ENST00000574924.6@ANAPC11	ENST00000574924.6	protein_coding	81891732,81893552,81894467,81899920	81891833,81893614,81894586,81900356	Gene ID= ENSG00000141552.17 TPM= 5.79 Transcript Type= protein_coding
chr17	81904232	81911399	81904232	81911399	-	transcript6250.chr17.nic@PCYT2	transcript6250.chr17.nic	protein_coding	81911267,81909514,81908876,81908568,81907773,81907554,81907204,81906760,81906464,81906100,81905670,81905066,81904232	81911399,81909602,81909037,81908634,81907857,81907598,81907257,81906898,81906546,81906177,81905735,81905154,81904944	Gene ID= ENSG00000185813.10 TPM= 3.86 Transcript Type= NA
chr17	81904343	81911406	81904343	81911406	-	ENST00000538721.6@PCYT2	ENST00000538721.6	protein_coding	81911267,81909514,81908876,81908568,81907773,81907554,81907204,81906760,81906464,81906100,81905670,81905382,81905066,81904343	81911406,81909602,81909037,81908634,81907857,81907598,81907257,81906898,81906546,81906177,81905735,81905447,81905154,81904944	Gene ID= ENSG00000185813.10 TPM= 13.51 Transcript Type= protein_coding
chr17	81911939	81918194	81911939	81918194	-	ENST00000328666.10@SIRT7	ENST00000328666.10	protein_coding	81918039,81917830,81917615,81915611,81915440,81914604,81914294,81914087,81913774,81911939	81918194,81917967,81917719,81915681,81915512,81914702,81914530,81914167,81913880,81912614	Gene ID= ENSG00000187531.13 TPM= 9.65 Transcript Type= protein_coding
chr17	81918270	81927714	81918270	81927714	-	ENST00000357736.8@MAFG	ENST00000357736.8	protein_coding	81927528,81923150,81918270	81927714,81923214,81923057	Gene ID= ENSG00000197063.10 TPM= 29.92 Transcript Type= protein_coding
chr17	81921560	81923532	81921560	81923532	-	ENST00000392366.7@MAFG	ENST00000392366.7	protein_coding	81923353,81923150,81921560	81923532,81923214,81923057	Gene ID= ENSG00000197063.10 TPM= 15.44 Transcript Type= protein_coding
chr17	81927829	81930753	81927829	81930753	+	ENST00000582106.1@MAFG-AS1	ENST00000582106.1	antisense_RNA	81927829,81929476	81928445,81930753	Gene ID= ENSG00000265688.1 TPM= 2.9 Transcript Type= antisense_RNA
chr17	81932384	81937328	81932384	81937328	-	ENST00000619204.4@PYCR1	ENST00000619204.4	protein_coding	81937262,81936748,81936123,81935337,81934926,81934653,81934326,81932384	81937328,81936861,81936193,81935516,81935147,81934745,81934489,81933376	Gene ID= ENSG00000183010.16 TPM= 9.17 Transcript Type= protein_coding
chr17	81932384	81937328	81932384	81937328	-	ENST00000629768.2@PYCR1	ENST00000629768.2	protein_coding	81937262,81936748,81936123,81935337,81934926,81934653,81932384	81937328,81936861,81936193,81935516,81935147,81934745,81933376	Gene ID= ENSG00000183010.16 TPM= 1.45 Transcript Type= protein_coding
chr17	81939644	81941913	81939644	81941913	-	transcript6302.chr17.nnic@NA	transcript6302.chr17.nnic	NA	81939644	81941913	Gene ID= novel_gene_chr17_6303 TPM= 50.2 Transcript Type= NA
chr17	81952507	81961293	81952507	81961293	-	ENST00000409678.7@NOTUM	ENST00000409678.7	protein_coding	81960587,81959640,81959471,81958935,81958335,81957806,81956883,81956650,81955397,81954256,81952507	81961293,81959692,81959566,81958995,81958393,81957908,81957074,81956750,81955544,81954303,81953267	Gene ID= ENSG00000185269.11 TPM= 1.93 Transcript Type= protein_coding
chr17	81977544	82017403	81977544	82017403	+	transcript6307.chr17.nnic@ASPSCR1	transcript6307.chr17.nnic	protein_coding	81977544,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82009956,82010802,82011543,82012231,82016476,82016800,82016941,82017309	81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010052,82010868,82011605,82012283,82016527,82016869,82017113,82017403	Gene ID= ENSG00000169696.15 TPM= 7.72 Transcript Type= NA
chr17	81977612	82017401	81977612	82017401	+	transcript6312.chr17.nic@ASPSCR1	transcript6312.chr17.nic	protein_coding	81977612,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82016941,82017309	81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017088,82017401	Gene ID= ENSG00000169696.15 TPM= 17.69 Transcript Type= NA
chr17	81977623	81999644	81977623	81999644	+	transcript6321.chr17.nic@ASPSCR1	transcript6321.chr17.nic	protein_coding	81977623,81979184,81983554,81985507,81994821,81995992,81996420	81977748,81979239,81983668,81985607,81994878,81996065,81999644	Gene ID= ENSG00000169696.15 TPM= 4.83 Transcript Type= NA
chr17	81977550	82017406	81977550	82017406	+	ENST00000306739.8@ASPSCR1	ENST00000306739.8	protein_coding	81977550,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82016941,82017309	81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017113,82017406	Gene ID= ENSG00000169696.15 TPM= 129.67 Transcript Type= protein_coding
chr17	82002861	82004307	82002861	82004307	-	transcript6324.chr17.nnic@NA	transcript6324.chr17.nnic	NA	82002861	82004307	Gene ID= novel_gene_chr17_6325 TPM= 1.93 Transcript Type= NA
chr17	82018703	82022918	82018703	82022918	-	ENST00000392359.7@CENPX	ENST00000392359.7	protein_coding	82022826,82019858,82019641,82019293,82018703	82022918,82019909,82019694,82019381,82019219	Gene ID= ENSG00000169689.14 TPM= 20.59 Transcript Type= protein_coding
chr17	82018703	82022918	82018703	82022918	-	ENST00000306704.10@CENPX	ENST00000306704.10	protein_coding	82022826,82019858,82019293,82018703	82022918,82019909,82019381,82019219	Gene ID= ENSG00000169689.14 TPM= 26.38 Transcript Type= protein_coding
chr17	82018703	82022892	82018703	82022892	-	ENST00000580435.5@CENPX	ENST00000580435.5	protein_coding	82022826,82019858,82019308,82018703	82022892,82019909,82019381,82019219	Gene ID= ENSG00000169689.14 TPM= 2.25 Transcript Type= protein_coding
chr17	82023302	82031151	82023302	82031151	+	ENST00000306688.7@LRRC45	ENST00000306688.7	protein_coding	82023302,82024278,82024693,82025000,82025379,82026899,82027386,82027674,82028011,82028234,82028397,82028613,82029093,82029543,82030065,82030319,82030609	82023863,82024339,82024763,82025178,82025507,82027011,82027444,82027751,82028146,82028311,82028508,82028683,82029185,82029635,82030238,82030466,82031151	Gene ID= ENSG00000169683.7 TPM= 8.69 Transcript Type= protein_coding
chr17	82035858	82037732	82035858	82037732	-	ENST00000306869.6@DCXR	ENST00000306869.6	protein_coding	82037631,82037450,82036859,82036721,82036544,82036384,82036191,82035858	82037732,82037547,82037013,82036763,82036643,82036448,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 126.05 Transcript Type= protein_coding
chr17	82035881	82037352	82035881	82037352	-	transcript6342.chr17.nic@DCXR	transcript6342.chr17.nic	protein_coding	82036859,82036721,82036544,82036384,82036191,82035881	82037352,82036763,82036643,82036448,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 13.44 Transcript Type= NA
chr17	82035879	82037698	82035879	82037698	-	ENST00000580320.5@DCXR	ENST00000580320.5	protein_coding	82037450,82036859,82036721,82036544,82036384,82036191,82035879	82037698,82037013,82036763,82036643,82036448,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 14.72 Transcript Type= retained_intron
chr17	82035881	82036987	82035881	82036987	-	ENST00000579842.5@DCXR	ENST00000579842.5	protein_coding	82036859,82036544,82036384,82036191,82035881	82036987,82036763,82036448,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 4.1 Transcript Type= retained_intron
chr17	82047902	82051774	82047902	82051774	-	ENST00000310496.8@RFNG	ENST00000310496.8	protein_coding	82051500,82051294,82050662,82050402,82049918,82049677,82049031,82047902	82051774,82051342,82050764,82050555,82050006,82049842,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 41.51 Transcript Type= protein_coding
chr17	82051875	82057470	82051875	82057470	+	ENST00000320548.8@GPS1	ENST00000320548.8	protein_coding	82051875,82052375,82053274,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82052459,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 14.04 Transcript Type= protein_coding
chr17	82051865	82057470	82051865	82057470	+	ENST00000578552.5@GPS1	ENST00000578552.5	protein_coding	82051865,82053274,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 183.61 Transcript Type= protein_coding
chr17	82051909	82057470	82051909	82057470	+	ENST00000306823.10@GPS1	ENST00000306823.10	protein_coding	82051909,82053274,82053868,82054498,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 22.72 Transcript Type= protein_coding
chr17	82051897	82057470	82051897	82057470	+	ENST00000623691.3@GPS1	ENST00000623691.3	protein_coding	82051897,82053274,82053868,82054510,82054898,82055165,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 25.46 Transcript Type= protein_coding
chr17	82051929	82057463	82051929	82057463	+	ENST00000584460.5@GPS1	ENST00000584460.5	protein_coding	82051929,82053234,82053868,82054498,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057463	Gene ID= ENSG00000169727.12 TPM= 1.61 Transcript Type= nonsense_mediated_decay
chr17	82057880	82065864	82057880	82065864	-	transcript6373.chr17.nic@DUS1L	transcript6373.chr17.nic	protein_coding	82065613,82064823,82064126,82062861,82061901,82061618,82061209,82060865,82060701,82059948,82058781,82058341,82057880	82065864,82065069,82064234,82062973,82061983,82061721,82061353,82060961,82060783,82060093,82058818,82058416,82058254	Gene ID= ENSG00000169718.17 TPM= 17.35 Transcript Type= NA
chr17	82060877	82065887	82060877	82065887	-	ENST00000582529.5@DUS1L	ENST00000582529.5	protein_coding	82065613,82064823,82064126,82063468,82062861,82061901,82061618,82061209,82060877	82065887,82065069,82064234,82063518,82062973,82061983,82061721,82061353,82060961	Gene ID= ENSG00000169718.17 TPM= 1.04 Transcript Type= protein_coding
chr17	82078333	82098332	82078333	82098332	-	ENST00000306749.3@FASN	ENST00000306749.3	protein_coding	82098121,82096319,82095320,82093598,82093219,82092897,82092697,82092455,82091222,82090882,82090375,82089632,82089250,82088969,82088761,82088390,82088116,82087954,82087685,82087325,82087050,82086254,82085482,82085238,82085035,82084799,82084513,82084234,82083975,82083772,82083517,82083202,82082914,82082527,82082323,82082009,82081601,82081164,82080692,82080370,82080140,82079357,82078333	82098332,82096452,82095472,82093771,82093419,82093019,82092812,82092589,82091684,82091069,82090564,82089726,82089384,82089172,82088876,82088562,82088307,82088034,82087861,82087504,82087253,82086558,82085871,82085402,82085156,82084953,82084716,82084384,82084153,82083891,82083639,82083425,82083115,82082678,82082414,82082160,82081843,82081352,82080922,82080590,82080238,82079608,82079280	Gene ID= ENSG00000169710.8 TPM= 14.48 Transcript Type= protein_coding
chr17	82101470	82155864	82101470	82155864	-	transcript6420.chr17.nic@CCDC57	transcript6420.chr17.nic	protein_coding	82151560,82134073,82128493,82127692,82101470	82155864,82134194,82128597,82127908,82101866	Gene ID= ENSG00000176155.18 TPM= 2.9 Transcript Type= NA
chr17	82215178	82215307	82215178	82215307	+	transcript6423.chr17.nnic@NA	transcript6423.chr17.nnic	NA	82215178	82215307	Gene ID= novel_gene_chr17_6424 TPM= 1.93 Transcript Type= NA
chr17	82229032	82239479	82229032	82239479	+	ENST00000582743.5@SLC16A3	ENST00000582743.5	protein_coding	82229032,82235983,82236729,82237138,82238702	82229106,82236231,82236872,82237893,82239479	Gene ID= ENSG00000141526.16 TPM= 42.02 Transcript Type= protein_coding
chr17	82229041	82261129	82229041	82261129	+	transcript6437.chr17.nic@SLC16A3	transcript6437.chr17.nic	protein_coding	82229041,82235983,82236729,82237138,82260899	82229106,82236231,82236872,82237893,82261129	Gene ID= ENSG00000141526.16 TPM= 2.73 Transcript Type= NA
chr17	82234899	82239498	82234899	82239498	+	ENST00000617373.4@SLC16A3	ENST00000617373.4	protein_coding	82234899,82235983,82236729,82237138,82238702	82235000,82236231,82236872,82237893,82239498	Gene ID= ENSG00000141526.16 TPM= 5.82 Transcript Type= protein_coding
chr17	82229041	82239273	82229041	82239273	+	transcript6441.chr17.nic@SLC16A3	transcript6441.chr17.nic	protein_coding	82229041,82235983,82236729,82237138	82229106,82236231,82236872,82239273	Gene ID= ENSG00000141526.16 TPM= 2.44 Transcript Type= NA
chr17	82232232	82239498	82232232	82239498	+	ENST00000392339.5@SLC16A3	ENST00000392339.5	protein_coding	82232232,82235983,82236729,82237138,82238702	82232359,82236231,82236872,82237893,82239498	Gene ID= ENSG00000141526.16 TPM= 5.82 Transcript Type= protein_coding
chr17	82235774	82239498	82235774	82239498	+	ENST00000619321.1@SLC16A3	ENST00000619321.1	protein_coding	82235774,82235983,82236729,82237138,82238702	82235842,82236231,82236872,82237893,82239498	Gene ID= ENSG00000141526.16 TPM= 17.4 Transcript Type= protein_coding
chr17	82237170	82261129	82237170	82261129	+	ENST00000583025.1@SLC16A3	ENST00000583025.1	protein_coding	82237170,82260899	82237893,82261129	Gene ID= ENSG00000141526.16 TPM= 1.93 Transcript Type= protein_coding
chr17	82242667	82273731	82242667	82273731	-	ENST00000314028.10@CSNK1D	ENST00000314028.10	protein_coding	82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82242667	82273731,82265796,82255577,82253244,82252604,82251527,82249602,82249014,82244831	Gene ID= ENSG00000141551.14 TPM= 24.62 Transcript Type= protein_coding
chr17	82244362	82273697	82244362	82273697	-	ENST00000392334.6@CSNK1D	ENST00000392334.6	protein_coding	82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82245976,82244362	82273697,82265796,82255577,82253244,82252604,82251527,82249602,82249014,82246039,82244831	Gene ID= ENSG00000141551.14 TPM= 39.58 Transcript Type= protein_coding
chr17	82239351	82244369	82239351	82244369	+	transcript6443.chr17.nnic@NA	transcript6443.chr17.nnic	NA	82239351	82244369	Gene ID= novel_gene_chr17_6444 TPM= 14 Transcript Type= NA
chr17	82293716	82294910	82293716	82294910	+	ENST00000566986.1@AC132872.1	ENST00000566986.1	lincRNA	82293716	82294910	Gene ID= ENSG00000260563.3 TPM= 2.9 Transcript Type= lincRNA
chr17	82321024	82333998	82321024	82333998	-	ENST00000269389.7@SECTM1	ENST00000269389.7	protein_coding	82333700,82327147,82324582,82322878,82321024	82333998,82327292,82324890,82323011,82322370	Gene ID= ENSG00000141574.7 TPM= 1.93 Transcript Type= protein_coding
chr17	82389223	82418637	82389223	82418637	-	ENST00000313056.9@OGFOD3	ENST00000313056.9	protein_coding	82418412,82415398,82411455,82409368,82406418,82405324,82403937,82398196,82389223	82418637,82415627,82411530,82409410,82406482,82405380,82404090,82398319,82392534	Gene ID= ENSG00000181396.12 TPM= 10.62 Transcript Type= protein_coding
chr17	82392226	82418618	82392226	82418618	-	transcript6473.chr17.nnic@OGFOD3	transcript6473.chr17.nnic	protein_coding	82418412,82414224,82411455,82409368,82406418,82405324,82403937,82398196,82392226	82418618,82415627,82411530,82409410,82406482,82405380,82404090,82398319,82392534	Gene ID= ENSG00000181396.12 TPM= 6.76 Transcript Type= NA
chr17	82418326	82442641	82418326	82442641	+	transcript6450.chr17.nnic@HEXDC	transcript6450.chr17.nnic	protein_coding	82418326,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82441744,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441075,82441266,82441889,82442641	Gene ID= ENSG00000169660.15 TPM= 4.05 Transcript Type= NA
chr17	82418326	82442641	82418326	82442641	+	transcript6451.chr17.nic@HEXDC	transcript6451.chr17.nic	protein_coding	82418326,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441075,82441266,82441889,82442641	Gene ID= ENSG00000169660.15 TPM= 44.43 Transcript Type= NA
chr17	82418326	82442645	82418326	82442645	+	transcript6454.chr17.nnic@HEXDC	transcript6454.chr17.nnic	protein_coding	82418326,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441075,82441266,82442645	Gene ID= ENSG00000169660.15 TPM= 3.09 Transcript Type= NA
chr17	82418318	82442645	82418318	82442645	+	ENST00000337014.10@HEXDC	ENST00000337014.10	protein_coding	82418318,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 6.3 Transcript Type= protein_coding
chr17	82418326	82442641	82418326	82442641	+	transcript6456.chr17.nic@HEXDC	transcript6456.chr17.nic	protein_coding	82418326,82419749,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82441800,82442177	82418740,82419883,82428645,82433822,82435872,82436738,82437363,82439713,82441075,82441266,82441889,82442641	Gene ID= ENSG00000169660.15 TPM= 7.75 Transcript Type= NA
chr17	82442643	82450829	82442643	82450829	-	ENST00000306645.9@C17orf62	ENST00000306645.9	protein_coding	82450700,82449170,82447580,82446623,82445864,82444447,82442643	82450829,82449292,82447621,82446696,82445960,82444591,82444124	Gene ID= ENSG00000178927.17 TPM= 33.79 Transcript Type= protein_coding
chr17	82453172	82453851	82453172	82453851	-	transcript6489.chr17.nnic@NA	transcript6489.chr17.nnic	NA	82453172	82453851	Gene ID= novel_gene_chr17_6490 TPM= 1.93 Transcript Type= NA
chr17	82458185	82488255	82458185	82488255	+	ENST00000390006.8@NARF	ENST00000390006.8	protein_coding	82458185,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82484813,82485497,82487916	82458508,82460072,82464430,82468896,82472698,82478918,82481211,82483779,82484950,82485654,82488255	Gene ID= ENSG00000141562.17 TPM= 13.51 Transcript Type= protein_coding
chr17	82458712	82488259	82458712	82488259	+	ENST00000577812.5@NARF	ENST00000577812.5	protein_coding	82458712,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82485497,82487916	82458830,82460072,82464430,82468896,82472698,82478918,82481211,82484950,82485654,82488259	Gene ID= ENSG00000141562.17 TPM= 7.72 Transcript Type= retained_intron
chr17	82458209	82459870	82458209	82459870	+	transcript6503.chr17.nnic@NA	transcript6503.chr17.nnic	NA	82458209	82459870	Gene ID= novel_gene_chr17_6504 TPM= 1.93 Transcript Type= NA
chr17	82598939	82603182	82598939	82603182	+	ENST00000624186.1@FOXK2	ENST00000624186.1	protein_coding	82598939	82603182	Gene ID= ENSG00000141568.20 TPM= 3.86 Transcript Type= TEC
chr17	82519715	82604607	82519715	82604607	+	ENST00000335255.9@FOXK2	ENST00000335255.9	protein_coding	82519715,82563354,82568054,82571724,82582741,82584013,82585904,82587063,82601303	82520307,82563548,82568201,82571870,82582934,82584188,82586200,82587272,82604607	Gene ID= ENSG00000141568.20 TPM= 37.65 Transcript Type= protein_coding
chr17	82614576	82648457	82614576	82648457	-	transcript6517.chr17.nic@WDR45B	transcript6517.chr17.nic	protein_coding	82648274,82643949,82627204,82625389,82621609,82619043,82617296,82616524,82614576	82648457,82644023,82627291,82625483,82621799,82619128,82617397,82616645,82616025	Gene ID= ENSG00000141580.15 TPM= 5.79 Transcript Type= NA
chr17	82614576	82626558	82614576	82626558	-	transcript6524.chr17.nnic@WDR45B	transcript6524.chr17.nnic	protein_coding	82626505,82625389,82621609,82619043,82617296,82616524,82614576	82626558,82625940,82621799,82619128,82617397,82616645,82616025	Gene ID= ENSG00000141580.15 TPM= 7.72 Transcript Type= NA
chr17	82654966	82698685	82654966	82698685	-	transcript6537.chr17.nic@RAB40B	transcript6537.chr17.nic	protein_coding	82698455,82664496,82660987,82659580,82658491,82656493,82654966	82698685,82664556,82661047,82659657,82658713,82658134,82655667	Gene ID= ENSG00000141542.10 TPM= 4.34 Transcript Type= NA
chr17	82654973	82698728	82654973	82698728	-	ENST00000571995.5@RAB40B	ENST00000571995.5	protein_coding	82698455,82664496,82660987,82659580,82658491,82654973	82698728,82664556,82661047,82659657,82658713,82658134	Gene ID= ENSG00000141542.10 TPM= 1.45 Transcript Type= protein_coding
chr17	82657067	82698703	82657067	82698703	-	transcript6547.chr17.nic@RAB40B	transcript6547.chr17.nic	protein_coding	82698455,82664496,82660987,82659580,82658491,82657067	82698703,82664556,82661270,82659657,82658713,82658134	Gene ID= ENSG00000141542.10 TPM= 6.27 Transcript Type= NA
chr17	82691231	82698730	82691231	82698730	-	transcript6552.chr17.nnic@RAB40B	transcript6552.chr17.nnic	protein_coding	82698455,82696389,82691231	82698730,82696853,82692948	Gene ID= ENSG00000141542.10 TPM= 1.93 Transcript Type= NA
chr17	82695198	82698665	82695198	82698665	-	transcript6553.chr17.nic@RAB40B	transcript6553.chr17.nic	protein_coding	82698455,82695198	82698665,82696853	Gene ID= ENSG00000141542.10 TPM= 1.93 Transcript Type= NA
chr17	82657067	82698687	82657067	82698687	-	ENST00000269347.10@RAB40B	ENST00000269347.10	protein_coding	82698455,82696389,82664496,82660987,82659580,82658491,82657067	82698687,82696853,82664556,82661047,82659657,82658713,82658134	Gene ID= ENSG00000141542.10 TPM= 7.24 Transcript Type= protein_coding
chr17	82716711	82728017	82716711	82728017	+	transcript6557.chr17.nnic@FN3KRP	transcript6557.chr17.nnic	protein_coding	82716711,82718906,82720272,82722804,82723060,82726480,82726833	82716896,82719057,82720363,82722886,82723111,82726602,82728017	Gene ID= ENSG00000141560.14 TPM= 2.41 Transcript Type= NA
chr17	82716683	82728017	82716683	82728017	+	ENST00000269373.10@FN3KRP	ENST00000269373.10	protein_coding	82716683,82718906,82720272,82722804,82726480,82726833	82716896,82719057,82720363,82722886,82726602,82728017	Gene ID= ENSG00000141560.14 TPM= 39.1 Transcript Type= protein_coding
chr17	82716752	82719771	82716752	82719771	+	transcript6562.chr17.nnic@NA	transcript6562.chr17.nnic	NA	82716752	82719771	Gene ID= novel_gene_chr17_6563 TPM= 1.93 Transcript Type= NA
chr17	82752071	82942704	82752071	82942704	+	transcript6567.chr17.nnic@TBCD	transcript6567.chr17.nnic	protein_coding	82752071,82756165,82763965,82766267,82768420,82772452,82781589,82797757,82800864,82805875,82807608,82809708,82814840,82870224,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924136,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449	82752377,82756215,82764062,82766368,82768566,82772507,82781721,82797802,82800996,82806011,82807668,82809782,82814934,82870380,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82924231,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82942704	Gene ID= ENSG00000141556.20 TPM= 2.9 Transcript Type= NA
chr17	82752064	82945922	82752064	82945922	+	ENST00000355528.8@TBCD	ENST00000355528.8	protein_coding	82752064,82756165,82763965,82766267,82768420,82772452,82781589,82797757,82800864,82805875,82807608,82809708,82814840,82870224,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449	82752377,82756215,82764062,82766368,82768566,82772507,82781721,82797802,82800996,82806011,82807668,82809782,82814934,82870380,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82945922	Gene ID= ENSG00000141556.20 TPM= 2.41 Transcript Type= protein_coding
chr17	82830567	82942704	82830567	82942704	+	transcript6574.chr17.nnic@TBCD	transcript6574.chr17.nnic	protein_coding	82830567,82870224,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449	82830717,82870380,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82942704	Gene ID= ENSG00000141556.20 TPM= 3.38 Transcript Type= NA
chr17	82943791	83051810	82943791	83051810	-	ENST00000320865.3@B3GNTL1	ENST00000320865.3	protein_coding	83051737,83048669,83048471,83035035,83014454,83005115,82965651,82961057,82957359,82957181,82956695,82946879,82943791	83051810,83048785,83048570,83035099,83014519,83005210,82965746,82961181,82957494,82957249,82956769,82946983,82944049	Gene ID= ENSG00000175711.8 TPM= 2.9 Transcript Type= protein_coding
chr18	158608	214629	158608	214629	+	ENST00000261601.7@USP14	ENST00000261601.7	protein_coding	158608,163308,166787,178933,180236,192842,196637,197616,198047,199202,202880,203098,204564,209971,210386,211133	158714,163453,166819,179037,180339,192900,196767,197696,198132,199316,202945,203190,204692,210031,210493,214629	Gene ID= ENSG00000101557.14 TPM= 18.34 Transcript Type= protein_coding
chr18	214521	268027	214521	268027	-	ENST00000261600.10@THOC1	ENST00000261600.10	protein_coding	267966,265457,265303,264026,260186,259682,259180,254273,252539,247849,246324,226801,225337,225089,224924,224084,223440,218886,216486,215429,214521	268027,265530,265363,264092,260304,259730,259275,254355,252612,247957,246455,226901,225403,225139,224994,224179,223505,218969,216633,215504,214921	Gene ID= ENSG00000079134.11 TPM= 6.76 Transcript Type= protein_coding
chr18	673859	712676	673859	712676	-	ENST00000251101.11@ENOSF1	ENST00000251101.11	protein_coding	712504,706470,697240,694248,693882,691204,691068,690549,688574,685921,683246,678696,677743,677345,675321,673859	712676,706578,697355,694334,693908,691276,691106,690631,688608,686008,683380,678737,677872,677444,675402,674406	Gene ID= ENSG00000132199.18 TPM= 1.93 Transcript Type= protein_coding
chr18	674001	712664	674001	712664	-	transcript36.chr18.nnic@ENOSF1	transcript36.chr18.nnic	protein_coding	712504,706470,694248,693882,691068,690549,688574,685921,683246,678696,677743,675321,674001	712664,706578,694334,693908,691106,690631,688608,686008,683380,678737,677872,675402,674406	Gene ID= ENSG00000132199.18 TPM= 1.93 Transcript Type= NA
chr18	721748	812245	721748	812245	-	transcript41.chr18.nnic@YES1	transcript41.chr18.nnic	protein_coding	812114,756557,751609,747920,745948,745708,743260,742918,739735,736808,732834,721748	812245,756835,751646,748018,746051,745857,743415,743097,739811,736961,732965,724632	Gene ID= ENSG00000176105.13 TPM= 2.41 Transcript Type= NA
chr18	721748	812238	721748	812238	-	ENST00000314574.4@YES1	ENST00000314574.4	protein_coding	812114,756557,751705,747920,745948,745708,743260,742918,739735,736808,732834,721748	812238,756835,751804,748018,746051,745857,743415,743097,739811,736961,732965,724632	Gene ID= ENSG00000176105.13 TPM= 10.14 Transcript Type= protein_coding
chr18	812386	813756	812386	813756	+	transcript48.chr18.nnic@NA	transcript48.chr18.nnic	NA	812386	813756	Gene ID= novel_gene_chr18_49 TPM= 3.86 Transcript Type= NA
chr18	2655740	2688707	2655740	2688707	+	transcript59.chr18.nic@SMCHD1	transcript59.chr18.nic	protein_coding	2655740,2666157,2666870,2673281,2674015,2688394,2688628	2656261,2666232,2667031,2673363,2674145,2688508,2688707	Gene ID= ENSG00000101596.14 TPM= 1.93 Transcript Type= NA
chr18	3185415	3220010	3185415	3220010	-	transcript75.chr18.nic@MYOM1	transcript75.chr18.nic	protein_coding	3219803,3214934,3193818,3188748,3185415	3220010,3215251,3193958,3189087,3187637	Gene ID= ENSG00000101605.12 TPM= 21.07 Transcript Type= NA
chr18	3066807	3220108	3066807	3220108	-	ENST00000356443.8@MYOM1	ENST00000356443.8	protein_coding	3219803,3214934,3193818,3188748,3187480,3176042,3174120,3173938,3168817,3164278,3154947,3151694,3149145,3141939,3135547,3134650,3131375,3129232,3126701,3119869,3116331,3112298,3102474,3100320,3100159,3094170,3090658,3089537,3089174,3086038,3085045,3083989,3083789,3079179,3075725,3075454,3071834,3066807	3220108,3215251,3193958,3189087,3187637,3176134,3174208,3174000,3168981,3164439,3155088,3151893,3149201,3142063,3135730,3134824,3131496,3129519,3126897,3119995,3116515,3112412,3102630,3100426,3100203,3094306,3090802,3089596,3089241,3086151,3085132,3084027,3083894,3079342,3075761,3075476,3071889,3067555	Gene ID= ENSG00000101605.12 TPM= 143.35 Transcript Type= protein_coding
chr18	3066953	3219849	3066953	3219849	-	ENST00000261606.11@MYOM1	ENST00000261606.11	protein_coding	3219803,3214934,3193818,3188748,3187480,3176042,3174120,3173938,3168817,3164278,3154947,3151694,3149145,3141939,3135547,3134650,3131375,3126701,3119869,3116331,3112298,3102474,3100320,3100159,3094170,3090658,3089537,3089174,3086038,3085045,3083989,3083789,3079179,3075725,3075454,3071834,3066953	3219849,3215251,3193958,3189087,3187637,3176134,3174208,3174000,3168981,3164439,3155088,3151893,3149201,3142063,3135730,3134824,3131496,3126897,3119995,3116515,3112412,3102630,3100426,3100203,3094306,3090802,3089596,3089241,3086151,3085132,3084027,3083894,3079342,3075761,3075476,3071889,3067555	Gene ID= ENSG00000101605.12 TPM= 28.96 Transcript Type= protein_coding
chr18	3180927	3183171	3180927	3183171	-	transcript105.chr18.nnic@NA	transcript105.chr18.nnic	NA	3180927	3183171	Gene ID= novel_gene_chr18_106 TPM= 1.93 Transcript Type= NA
chr18	3246405	3248090	3246405	3248090	-	transcript103.chr18.nnic@NA	transcript103.chr18.nnic	NA	3246405	3248090	Gene ID= novel_gene_chr18_104 TPM= 19.31 Transcript Type= NA
chr18	3252275	3256236	3252275	3256236	+	transcript87.chr18.nic@MYL12A	transcript87.chr18.nic	protein_coding	3252275,3253233,3253889,3255746	3252482,3253428,3254050,3256236	Gene ID= ENSG00000101608.12 TPM= 45 Transcript Type= NA
chr18	3247907	3248644	3247907	3248644	+	ENST00000608786.1@MYL12A	ENST00000608786.1	protein_coding	3247907	3248644	Gene ID= ENSG00000101608.12 TPM= 2.9 Transcript Type= retained_intron
chr18	3247481	3256227	3247481	3256227	+	ENST00000579226.5@MYL12A	ENST00000579226.5	protein_coding	3247481,3253233,3253889,3255746	3247587,3253428,3254050,3256227	Gene ID= ENSG00000101608.12 TPM= 29.9 Transcript Type= protein_coding
chr18	3247530	3256236	3247530	3256236	+	ENST00000217652.7@MYL12A	ENST00000217652.7	protein_coding	3247530,3253233,3253889,3255746	3247909,3253428,3254050,3256236	Gene ID= ENSG00000101608.12 TPM= 378.04 Transcript Type= protein_coding
chr18	3261909	3278284	3261909	3278284	+	ENST00000237500.9@MYL12B	ENST00000237500.9	protein_coding	3261909,3272884,3277253,3277765	3262237,3273082,3277414,3278284	Gene ID= ENSG00000118680.12 TPM= 162.17 Transcript Type= protein_coding
chr18	3262417	3278284	3262417	3278284	+	ENST00000581193.5@MYL12B	ENST00000581193.5	protein_coding	3262417,3272884,3277253,3277765	3262784,3273082,3277414,3278284	Gene ID= ENSG00000118680.12 TPM= 6.76 Transcript Type= protein_coding
chr18	3449704	3458411	3449704	3458411	+	ENST00000343820.9@TGIF1	ENST00000343820.9	protein_coding	3449704,3456354,3457365	3450505,3456580,3458411	Gene ID= ENSG00000177426.20 TPM= 27.51 Transcript Type= protein_coding
chr18	3455414	3458411	3455414	3458411	+	ENST00000472042.1@TGIF1	ENST00000472042.1	protein_coding	3455414,3457365	3456580,3458411	Gene ID= ENSG00000177426.20 TPM= 1.45 Transcript Type= protein_coding
chr18	5236724	5238598	5236724	5238598	-	ENST00000581067.1@LINC00526	ENST00000581067.1	lincRNA	5236724	5238598	Gene ID= ENSG00000264575.1 TPM= 8.69 Transcript Type= lincRNA
chr18	5238075	5246508	5238075	5246508	+	transcript143.chr18.nnic@LINC00667	transcript143.chr18.nnic	lincRNA	5238075,5241699,5243594	5239196,5241812,5246508	Gene ID= ENSG00000263753.6 TPM= 1.93 Transcript Type= NA
chr18	5238075	5246508	5238075	5246508	+	transcript146.chr18.nnic@LINC00667	transcript146.chr18.nnic	lincRNA	5238075,5241699,5243594	5239196,5241889,5246508	Gene ID= ENSG00000263753.6 TPM= 1.93 Transcript Type= NA
chr18	5238069	5243317	5238069	5243317	+	transcript152.chr18.nnic@LINC00667	transcript152.chr18.nnic	lincRNA	5238069,5240648	5239049,5243317	Gene ID= ENSG00000263753.6 TPM= 9.01 Transcript Type= NA
chr18	5238097	5243317	5238097	5243317	+	transcript155.chr18.nnic@LINC00667	transcript155.chr18.nnic	lincRNA	5238097,5240648	5239196,5243317	Gene ID= ENSG00000263753.6 TPM= 2.25 Transcript Type= NA
chr18	5237826	5239859	5237826	5239859	+	ENST00000581471.2@LINC00667	ENST00000581471.2	lincRNA	5237826	5239859	Gene ID= ENSG00000263753.6 TPM= 2.9 Transcript Type= lincRNA
chr18	5238100	5246508	5238100	5246508	+	ENST00000582008.5@LINC00667	ENST00000582008.5	lincRNA	5238100,5241699,5243594	5239049,5241812,5246508	Gene ID= ENSG00000263753.6 TPM= 2.9 Transcript Type= lincRNA
chr18	5237852	5243315	5237852	5243315	+	transcript160.chr18.nnic@NA	transcript160.chr18.nnic	NA	5237852	5243315	Gene ID= novel_gene_chr18_161 TPM= 6.11 Transcript Type= NA
chr18	5289019	5296040	5289019	5296040	-	ENST00000357006.8@ZBTB14	ENST00000357006.8	protein_coding	5295813,5293972,5293244,5289019	5296040,5294001,5293327,5292204	Gene ID= ENSG00000198081.10 TPM= 1.93 Transcript Type= protein_coding
chr18	6462144	6463010	6462144	6463010	-	ENST00000489915.1@AP005202.1	ENST00000489915.1	transcribed_processed_pseudogene	6462144	6463010	Gene ID= ENSG00000235552.4 TPM= 76.26 Transcript Type= transcribed_processed_pseudogene
chr18	7774140	8406858	7774140	8406858	+	ENST00000400060.8@PTPRM	ENST00000400060.8	protein_coding	7774140,7888106,7906505,7926568,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8143647,8244058,8247845,8248150,8252488,8253227,8296368,8314781,8319178,8343423,8370890,8376046,8376462,8378265,8379167,8380296,8384561,8387072,8394476,8406109	7774271,7888377,7906583,7926683,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8143779,8244209,8247919,8248176,8252499,8253414,8296455,8314857,8319214,8343520,8371006,8376200,8376597,8378414,8379340,8380427,8384686,8387235,8394611,8406858	Gene ID= ENSG00000173482.16 TPM= 6.92 Transcript Type= protein_coding
chr18	7774147	8406856	7774147	8406856	+	transcript177.chr18.nic@PTPRM	transcript177.chr18.nic	protein_coding	7774147,7888106,7906505,7926568,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8122242,8143647,8244058,8247845,8253227,8296368,8314781,8319178,8343423,8370890,8376046,8376462,8378265,8379167,8380296,8384561,8387072,8394476,8406109	7774271,7888377,7906583,7926683,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8122316,8143779,8244209,8247919,8253414,8296455,8314857,8319214,8343520,8371006,8376200,8376597,8378414,8379340,8380427,8384686,8387235,8394611,8406856	Gene ID= ENSG00000173482.16 TPM= 5.79 Transcript Type= NA
chr18	7774147	8406856	7774147	8406856	+	transcript180.chr18.nic@PTPRM	transcript180.chr18.nic	protein_coding	7774147,7888106,7906505,7926568,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8143647,8244058,8247845,8253227,8296368,8314781,8319178,8343423,8370890,8376046,8376462,8378265,8379167,8380296,8384561,8387072,8394476,8406109	7774271,7888377,7906583,7926683,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8143779,8244209,8247919,8253414,8296455,8314857,8319214,8343520,8371006,8376200,8376597,8378414,8379340,8380427,8384686,8387235,8394611,8406856	Gene ID= ENSG00000173482.16 TPM= 16.57 Transcript Type= NA
chr18	8609445	8639381	8609445	8639381	+	ENST00000329286.6@RAB12	ENST00000329286.6	protein_coding	8609445,8624938,8633189,8635533,8636253,8638149	8609953,8624998,8633327,8635622,8636357,8639381	Gene ID= ENSG00000206418.3 TPM= 124.53 Transcript Type= protein_coding
chr18	9102677	9134341	9102677	9134341	+	transcript200.chr18.nic@NDUFV2	transcript200.chr18.nic	protein_coding	9102677,9117838,9119326,9119474,9122513,9124874,9126831,9134186	9102797,9117903,9119388,9119590,9122681,9124996,9126907,9134341	Gene ID= ENSG00000178127.12 TPM= 14 Transcript Type= NA
chr18	9102630	9134345	9102630	9134345	+	ENST00000318388.10@NDUFV2	ENST00000318388.10	protein_coding	9102630,9117838,9119326,9119474,9122513,9124874,9126831,9134186	9102797,9117903,9119388,9119590,9122681,9124983,9126907,9134345	Gene ID= ENSG00000178127.12 TPM= 375.51 Transcript Type= protein_coding
chr18	9135713	9137452	9135713	9137452	-	transcript233.chr18.nnic@NA	transcript233.chr18.nnic	NA	9135713	9137452	Gene ID= novel_gene_chr18_234 TPM= 11.58 Transcript Type= NA
chr18	9137019	9254737	9137019	9254737	+	transcript214.chr18.nnic@ANKRD12	transcript214.chr18.nnic	protein_coding	9137019,9137724,9182382,9195551,9204476,9208657,9211584,9216758,9221852,9254211	9137096,9137873,9182519,9195698,9204544,9208803,9211784,9216900,9221999,9254737	Gene ID= ENSG00000101745.16 TPM= 2.25 Transcript Type= NA
chr18	9136777	9285985	9136777	9285985	+	ENST00000262126.8@ANKRD12	ENST00000262126.8	protein_coding	9136777,9182382,9195551,9204476,9208657,9211584,9216758,9221852,9254211,9263790,9275524,9279549,9280941	9136965,9182519,9195698,9204544,9208803,9211784,9216900,9221999,9258931,9263888,9275667,9279644,9285985	Gene ID= ENSG00000101745.16 TPM= 8.69 Transcript Type= protein_coding
chr18	9136784	9255253	9136784	9255253	+	transcript220.chr18.nic@ANKRD12	transcript220.chr18.nic	protein_coding	9136784,9182382,9195551,9204476,9208657,9211584,9216758,9221852,9254211	9137096,9182519,9195698,9204544,9208803,9211784,9216900,9221999,9255253	Gene ID= ENSG00000101745.16 TPM= 5.31 Transcript Type= NA
chr18	9137125	9255253	9137125	9255253	+	transcript223.chr18.nnic@ANKRD12	transcript223.chr18.nnic	protein_coding	9137125,9182382,9195551,9204476,9208657,9211584,9216758,9221852,9254211	9137589,9182519,9195698,9204544,9208803,9211784,9216900,9221999,9255253	Gene ID= ENSG00000101745.16 TPM= 2.41 Transcript Type= NA
chr18	9136783	9254737	9136783	9254737	+	transcript227.chr18.nic@ANKRD12	transcript227.chr18.nic	protein_coding	9136783,9182382,9195551,9208657,9211584,9216758,9221852,9254211	9136965,9182519,9195698,9208803,9211784,9216900,9221999,9254737	Gene ID= ENSG00000101745.16 TPM= 3.21 Transcript Type= NA
chr18	9334767	9402420	9334767	9402420	+	ENST00000262120.9@TWSG1	ENST00000262120.9	protein_coding	9334767,9337193,9359972,9396280,9399346	9334920,9337352,9360071,9396546,9402420	Gene ID= ENSG00000128791.11 TPM= 19.31 Transcript Type= protein_coding
chr18	9475009	9538114	9475009	9538114	+	ENST00000019317.8@RALBP1	ENST00000019317.8	protein_coding	9475009,9512991,9516845,9522160,9524594,9525720,9530834,9533335,9533703,9535671	9475176,9513289,9517303,9522509,9524755,9525851,9530941,9533456,9533826,9538114	Gene ID= ENSG00000017797.12 TPM= 5.79 Transcript Type= protein_coding
chr18	9475548	9513257	9475548	9513257	+	transcript251.chr18.nic@RALBP1	transcript251.chr18.nic	protein_coding	9475548,9512991	9475691,9513257	Gene ID= ENSG00000017797.12 TPM= 4.83 Transcript Type= NA
chr18	9546791	9614569	9546791	9614569	-	ENST00000400555.7@PPP4R1	ENST00000400555.7	protein_coding	9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546791	9614569,9614270,9595102,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952	Gene ID= ENSG00000154845.15 TPM= 11.58 Transcript Type= protein_coding
chr18	9546791	9614558	9546791	9614558	-	ENST00000400556.7@PPP4R1	ENST00000400556.7	protein_coding	9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546791	9614558,9614270,9595153,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952	Gene ID= ENSG00000154845.15 TPM= 3.86 Transcript Type= protein_coding
chr18	9708165	9862551	9708165	9862551	+	ENST00000578921.5@RAB31	ENST00000578921.5	protein_coding	9708165,9775278,9792154,9814020,9815116,9845582,9859228	9708444,9775357,9792235,9814091,9815222,9845691,9862551	Gene ID= ENSG00000168461.12 TPM= 1.93 Transcript Type= protein_coding
chr18	10454638	10488693	10454638	10488693	+	transcript292.chr18.nic@APCDD1	transcript292.chr18.nic	protein_coding	10454638,10471530,10485462,10487590	10455039,10472061,10485783,10488693	Gene ID= ENSG00000154856.12 TPM= 9.65 Transcript Type= NA
chr18	10526034	10552760	10526034	10552760	+	ENST00000322897.10@NAPG	ENST00000322897.10	protein_coding	10526034,10530770,10532711,10533536,10534466,10539762,10539988,10540329,10546326,10548299,10548967,10550077	10526158,10530837,10532795,10533553,10534496,10539871,10540054,10540399,10546404,10548378,10549096,10552760	Gene ID= ENSG00000134265.12 TPM= 31.86 Transcript Type= protein_coding
chr18	10589273	10606736	10589273	10606736	+	transcript304.chr18.nnic@AP001099.1	transcript304.chr18.nnic	lincRNA	10589273,10604746	10589434,10606736	Gene ID= ENSG00000265728.1 TPM= 4.83 Transcript Type= NA
chr18	11851396	11854449	11851396	11854449	+	ENST00000526991.2@CHMP1B	ENST00000526991.2	protein_coding	11851396	11854449	Gene ID= ENSG00000255112.2 TPM= 130.32 Transcript Type= protein_coding
chr18	11884053	11908375	11884053	11908375	-	transcript330.chr18.nic@MPPE1	transcript330.chr18.nic	protein_coding	11908201,11906203,11897526,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11884053	11908375,11906309,11897620,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 2.25 Transcript Type= NA
chr18	11884053	11908652	11884053	11908652	-	transcript331.chr18.nic@MPPE1	transcript331.chr18.nic	protein_coding	11908201,11906203,11905738,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11884053	11908652,11906309,11905953,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 4.18 Transcript Type= NA
chr18	11882622	11909223	11882622	11909223	-	ENST00000588072.5@MPPE1	ENST00000588072.5	protein_coding	11908201,11906203,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11882622	11909223,11906309,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 1.93 Transcript Type= protein_coding
chr18	11884053	11908586	11884053	11908586	-	transcript341.chr18.nic@MPPE1	transcript341.chr18.nic	protein_coding	11908201,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11884053	11908586,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 5.15 Transcript Type= NA
chr18	11884068	11908330	11884068	11908330	-	ENST00000344987.11@MPPE1	ENST00000344987.11	protein_coding	11908201,11906203,11896984,11893468,11889387,11888669,11886917,11886499,11885676,11884068	11908330,11906309,11897356,11893576,11889490,11888743,11887025,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 3.86 Transcript Type= protein_coding
chr18	11908712	11909223	11908712	11909223	+	ENST00000609611.1@AP001269.4	ENST00000609611.1	antisense_RNA	11908712	11909223	Gene ID= ENSG00000273141.1 TPM= 1.93 Transcript Type= antisense_RNA
chr18	11981451	12030875	11981451	12030875	+	transcript357.chr18.nic@IMPA2	transcript357.chr18.nic	protein_coding	11981451,11999054,12008333,12009883,12012170,12014265,12028043,12028842,12030343	11981765,11999187,12008591,12009987,12012215,12014373,12028151,12028993,12030875	Gene ID= ENSG00000141401.11 TPM= 35.23 Transcript Type= NA
chr18	11981452	12030875	11981452	12030875	+	transcript374.chr18.nic@IMPA2	transcript374.chr18.nic	protein_coding	11981452,11999054,12009883,12012170,12014265,12028043,12030343	11981765,11999187,12009987,12012215,12014373,12028993,12030875	Gene ID= ENSG00000141401.11 TPM= 31.78 Transcript Type= NA
chr18	11981428	12030883	11981428	12030883	+	ENST00000269159.7@IMPA2	ENST00000269159.7	protein_coding	11981428,11999054,12009883,12012170,12014265,12028043,12028842,12030343	11981765,11999187,12009987,12012215,12014373,12028151,12028993,12030883	Gene ID= ENSG00000141401.11 TPM= 623.14 Transcript Type= protein_coding
chr18	11981497	11982808	11981497	11982808	+	transcript378.chr18.nnic@NA	transcript378.chr18.nnic	NA	11981497	11982808	Gene ID= novel_gene_chr18_379 TPM= 6.76 Transcript Type= NA
chr18	12308059	12326619	12308059	12326619	+	ENST00000317702.9@TUBB6	ENST00000317702.9	protein_coding	12308059,12308687,12310943,12325067	12308349,12308795,12311053,12326619	Gene ID= ENSG00000176014.12 TPM= 15.44 Transcript Type= protein_coding
chr18	12308234	12329826	12308234	12329826	+	ENST00000591909.5@TUBB6	ENST00000591909.5	protein_coding	12308234,12308687,12310943,12329146	12308349,12308795,12311053,12329826	Gene ID= ENSG00000176014.12 TPM= 1.93 Transcript Type= protein_coding
chr18	12328944	12377342	12328944	12377342	-	transcript404.chr18.nnic@AFG3L2	transcript404.chr18.nnic	protein_coding	12376969,12371592,12370849,12367276,12366965,12363782,12359927,12358670,12356694,12353005,12351306,12351085,12348273,12344132,12337341,12328944	12377342,12371691,12370926,12367382,12367117,12363856,12360051,12358943,12356831,12353158,12351413,12351210,12348383,12344247,12337535,12329783	Gene ID= ENSG00000141385.9 TPM= 11.58 Transcript Type= NA
chr18	12328944	12377314	12328944	12377314	-	ENST00000269143.7@AFG3L2	ENST00000269143.7	protein_coding	12376969,12371592,12370849,12367276,12366965,12363782,12359927,12358670,12356694,12353005,12351306,12351085,12348273,12344132,12340201,12337341,12328944	12377314,12371691,12370926,12367382,12367117,12363856,12360051,12358943,12356831,12353158,12351413,12351210,12348383,12344247,12340401,12337535,12329783	Gene ID= ENSG00000141385.9 TPM= 286.7 Transcript Type= protein_coding
chr18	12446512	12658134	12446512	12658134	-	ENST00000409402.8@SPIRE1	ENST00000409402.8	protein_coding	12657530,12635062,12546674,12535476,12512454,12506477,12496016,12493072,12485959,12479699,12464868,12463351,12454346,12453068,12452485,12452255,12446512	12658134,12635096,12546904,12535601,12512531,12506641,12496102,12493201,12486000,12479871,12464958,12463493,12454483,12453138,12452512,12452391,12449896	Gene ID= ENSG00000134278.15 TPM= 9.49 Transcript Type= protein_coding
chr18	12446512	12658119	12446512	12658119	-	transcript432.chr18.nnic@SPIRE1	transcript432.chr18.nnic	protein_coding	12657530,12635062,12546674,12535476,12512454,12496016,12493072,12479699,12464868,12463351,12454346,12453068,12452485,12452255,12446512	12658119,12635096,12546904,12535601,12512531,12496102,12493201,12479871,12464958,12463493,12454483,12453138,12452512,12452391,12449896	Gene ID= ENSG00000134278.15 TPM= 7.56 Transcript Type= NA
chr18	12446513	12658045	12446513	12658045	-	ENST00000410092.7@SPIRE1	ENST00000410092.7	protein_coding	12657530,12635062,12546674,12535476,12512454,12506477,12496016,12493072,12479699,12464868,12463351,12454346,12453068,12452485,12452255,12446513	12658045,12635096,12546904,12535601,12512531,12506641,12496102,12493201,12479871,12464958,12463493,12454483,12453138,12452512,12452391,12449896	Gene ID= ENSG00000134278.15 TPM= 38.93 Transcript Type= protein_coding
chr18	12702426	12725740	12702426	12725740	+	ENST00000317615.10@PSMG2	ENST00000317615.10	protein_coding	12702426,12706550,12712702,12718517,12720510,12724499,12725439	12703164,12706721,12712760,12718635,12720683,12724619,12725740	Gene ID= ENSG00000128789.20 TPM= 82.05 Transcript Type= protein_coding
chr18	12672632	12702774	12672632	12702774	-	ENST00000262127.6@CEP76	ENST00000262127.6	protein_coding	12702486,12700958,12699830,12698979,12697223,12695254,12691359,12686262,12680662,12678109,12674536,12672632	12702774,12701113,12699905,12699203,12697408,12695351,12691487,12686450,12680828,12678442,12674753,12673503	Gene ID= ENSG00000101624.10 TPM= 2.9 Transcript Type= protein_coding
chr18	12785478	12884338	12785478	12884338	-	ENST00000327283.7@PTPN2	ENST00000327283.7	protein_coding	12884073,12859164,12836791,12830943,12825810,12817156,12814203,12801970,12794384,12785478	12884338,12859254,12836891,12831041,12825944,12817365,12814355,12802151,12794485,12785844	Gene ID= ENSG00000175354.18 TPM= 10.62 Transcript Type= protein_coding
chr18	12947985	12987536	12947985	12987536	+	transcript471.chr18.nic@SEH1L	transcript471.chr18.nic	protein_coding	12947985,12951855,12963160,12971153,12978752,12982518,12984040,12986862	12948232,12951905,12963371,12971251,12978892,12982675,12984190,12987536	Gene ID= ENSG00000085415.15 TPM= 3.86 Transcript Type= NA
chr18	12948021	12987536	12948021	12987536	+	ENST00000399892.6@SEH1L	ENST00000399892.6	protein_coding	12948021,12951855,12955463,12963160,12971153,12978752,12982518,12984040,12986862	12948232,12951905,12955609,12963371,12971251,12978892,12982675,12984190,12987536	Gene ID= ENSG00000085415.15 TPM= 75.78 Transcript Type= protein_coding
chr18	12947995	12987536	12947995	12987536	+	ENST00000262124.15@SEH1L	ENST00000262124.15	protein_coding	12947995,12951855,12955463,12963160,12971153,12978752,12982518,12984040,12985240	12948232,12951905,12955609,12963371,12971251,12978892,12982675,12984190,12987536	Gene ID= ENSG00000085415.15 TPM= 9.17 Transcript Type= protein_coding
chr18	13665666	13726534	13665666	13726534	-	transcript484.chr18.nic@FAM210A	transcript484.chr18.nic	protein_coding	13726329,13681605,13671862,13670871,13665666	13726534,13682105,13671973,13670968,13666713	Gene ID= ENSG00000177150.12 TPM= 1.93 Transcript Type= NA
chr18	13665744	13726560	13665744	13726560	-	transcript486.chr18.nic@FAM210A	transcript486.chr18.nic	protein_coding	13726329,13687743,13681605,13671862,13665744	13726560,13687882,13682105,13671973,13666713	Gene ID= ENSG00000177150.12 TPM= 1.93 Transcript Type= NA
chr18	13726661	13764558	13726661	13764558	+	ENST00000383314.6@RNMT	ENST00000383314.6	protein_coding	13726661,13730627,13731476,13734464,13737010,13740167,13741510,13742488,13746220,13752326,13754114,13759942	13726729,13730755,13731934,13734599,13737135,13740279,13741691,13742652,13746337,13752427,13754147,13764558	Gene ID= ENSG00000101654.17 TPM= 5.79 Transcript Type= protein_coding
chr18	13726660	13760285	13726660	13760285	+	ENST00000543302.6@RNMT	ENST00000543302.6	protein_coding	13726660,13731476,13734464,13737010,13740167,13741510,13742488,13746220,13752326,13754114,13759942	13726729,13731934,13734599,13737135,13740279,13741691,13742652,13746337,13752427,13754147,13760285	Gene ID= ENSG00000101654.17 TPM= 2.9 Transcript Type= protein_coding
chr18	13726704	13764556	13726704	13764556	+	ENST00000592764.5@RNMT	ENST00000592764.5	protein_coding	13726704,13730627,13731476,13734464,13737010,13740167,13741510,13742488,13746220,13752326,13754114,13762039	13726729,13730755,13731934,13734599,13737135,13740279,13741691,13742652,13746337,13752427,13754147,13764556	Gene ID= ENSG00000101654.17 TPM= 7.72 Transcript Type= protein_coding
chr18	21380047	21451064	21380047	21451064	-	transcript522.chr18.nnic@AC015878.1	transcript522.chr18.nnic	antisense_RNA	21450883,21401821,21401115,21387513,21380047	21451064,21401899,21401171,21387587,21380675	Gene ID= ENSG00000265751.1 TPM= 4.83 Transcript Type= NA
chr18	21529281	21600653	21529281	21600653	-	transcript533.chr18.nnic@ESCO1	transcript533.chr18.nnic	protein_coding	21600415,21584310,21575672,21573314,21567980,21566146,21564203,21560859,21539920,21536042,21532473,21529281	21600653,21584440,21575777,21575430,21568094,21566206,21564317,21560990,21540009,21536185,21532660,21530490	Gene ID= ENSG00000141446.10 TPM= 1.93 Transcript Type= NA
chr18	21529281	21600679	21529281	21600679	-	transcript537.chr18.nnic@ESCO1	transcript537.chr18.nnic	protein_coding	21600623,21584310,21575672,21573314,21567980,21566146,21564203,21560859,21536042,21532473,21529281	21600679,21584440,21575777,21575430,21568094,21566206,21564317,21560990,21536185,21532660,21530490	Gene ID= ENSG00000141446.10 TPM= 1.93 Transcript Type= NA
chr18	21529281	21600736	21529281	21600736	-	ENST00000269214.9@ESCO1	ENST00000269214.9	protein_coding	21600623,21584310,21575672,21573314,21567980,21566146,21564203,21560859,21539920,21536042,21532473,21529281	21600736,21584440,21575777,21575430,21568094,21566206,21564317,21560990,21540009,21536185,21532660,21530490	Gene ID= ENSG00000141446.10 TPM= 13.51 Transcript Type= protein_coding
chr18	21650990	21704812	21650990	21704812	-	transcript552.chr18.nnic@ABHD3	transcript552.chr18.nnic	protein_coding	21704504,21703584,21702316,21683920,21681761,21663678,21659170,21657104,21656861,21650990	21704812,21703747,21702498,21683965,21681956,21664230,21659343,21657152,21657026,21651763	Gene ID= ENSG00000158201.9 TPM= 1.93 Transcript Type= NA
chr18	21650928	21704767	21650928	21704767	-	ENST00000580981.5@ABHD3	ENST00000580981.5	protein_coding	21704504,21703584,21702316,21659170,21657104,21656861,21650928	21704767,21703747,21702498,21659343,21657152,21657026,21651763	Gene ID= ENSG00000158201.9 TPM= 1.93 Transcript Type= protein_coding
chr18	21830601	21831124	21830601	21831124	+	transcript573.chr18.nnic@NA	transcript573.chr18.nnic	NA	21830601	21831124	Gene ID= novel_gene_chr18_574 TPM= 2.9 Transcript Type= NA
chr18	22169443	22202528	22169443	22202528	+	ENST00000269216.7@GATA6	ENST00000269216.7	protein_coding	22169443,22171108,22176955,22181453,22182757,22182940,22200656	22169682,22172279,22177121,22181578,22182844,22183043,22202528	Gene ID= ENSG00000141448.8 TPM= 3.86 Transcript Type= protein_coding
chr18	23452823	23483140	23452823	23483140	+	ENST00000339486.7@RIOK3	ENST00000339486.7	protein_coding	23452823,23462964,23463967,23464206,23464519,23466133,23467399,23473429,23474948,23477006,23477179,23479317,23481172	23453502,23463079,23464112,23464313,23464628,23466276,23467526,23473626,23475107,23477086,23477268,23479424,23483140	Gene ID= ENSG00000101782.14 TPM= 194.83 Transcript Type= protein_coding
chr18	23453292	23482528	23453292	23482528	+	ENST00000581302.5@RIOK3	ENST00000581302.5	protein_coding	23453292,23462964,23463967,23464206,23464519,23466133,23467399,23473429,23474948,23477006,23479317,23481172	23453502,23463079,23464112,23464313,23464628,23466276,23467526,23473626,23475107,23477268,23479424,23482528	Gene ID= ENSG00000101782.14 TPM= 4.66 Transcript Type= retained_intron
chr18	23453308	23481500	23453308	23481500	+	ENST00000577501.5@RIOK3	ENST00000577501.5	protein_coding	23453308,23462964,23463967,23464206,23464519,23466133,23467399,23473429,23474948,23477006,23477179,23479326,23481172	23453502,23463079,23464112,23464313,23464628,23466276,23467526,23473626,23475107,23477086,23477268,23479424,23481500	Gene ID= ENSG00000101782.14 TPM= 7.72 Transcript Type= protein_coding
chr18	23503463	23531778	23503463	23531778	+	transcript612.chr18.nic@C18orf8	transcript612.chr18.nic	protein_coding	23503463,23504371,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530387,23531625	23503720,23504447,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531778	Gene ID= ENSG00000141452.9 TPM= 3.38 Transcript Type= NA
chr18	23503509	23531782	23503509	23531782	+	ENST00000269221.7@C18orf8	ENST00000269221.7	protein_coding	23503509,23504371,23506970,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530387,23531625	23503720,23504447,23507054,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531782	Gene ID= ENSG00000141452.9 TPM= 22.68 Transcript Type= protein_coding
chr18	23506184	23586976	23506184	23586976	-	transcript596.chr18.nic@NPC1	transcript596.chr18.nic	protein_coding	23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533355,23506184	23586976,23573574,23572180,23568998,23561527,23560480,23557190,23556613,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517,23506642	Gene ID= ENSG00000141458.12 TPM= 12.07 Transcript Type= NA
chr18	23531502	23586479	23531502	23586479	-	transcript602.chr18.nic@NPC1	transcript602.chr18.nic	protein_coding	23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533355,23531502	23586479,23573574,23572180,23568998,23561527,23560480,23557190,23556664,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517,23532284	Gene ID= ENSG00000141458.12 TPM= 1.93 Transcript Type= NA
chr18	23532696	23586976	23532696	23586976	-	transcript606.chr18.nic@NPC1	transcript606.chr18.nic	protein_coding	23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23532696	23586976,23573574,23572180,23568998,23561527,23560480,23557190,23556613,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559	Gene ID= ENSG00000141458.12 TPM= 3.38 Transcript Type= NA
chr18	23531437	23586898	23531437	23586898	-	ENST00000269228.9@NPC1	ENST00000269228.9	protein_coding	23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533355,23531437	23586898,23573574,23572180,23568998,23561527,23560480,23557190,23556613,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517,23532284	Gene ID= ENSG00000141458.12 TPM= 9.65 Transcript Type= protein_coding
chr18	24014420	24020288	24014420	24020288	+	ENST00000584250.1@TTC39C	ENST00000584250.1	protein_coding	24014420,24019860	24015038,24020288	Gene ID= ENSG00000168234.12 TPM= 1.93 Transcript Type= protein_coding
chr18	24162045	24272232	24162045	24272232	-	ENST00000399443.7@OSBPL1A	ENST00000399443.7	protein_coding	24271622,24239220,24225042,24196125,24181145,24179738,24178013,24172376,24171409,24170327,24167329,24166579,24165065,24162045	24272232,24239382,24225198,24196200,24181279,24179835,24178195,24172483,24171498,24170453,24167445,24166702,24165155,24163281	Gene ID= ENSG00000141447.17 TPM= 34.1 Transcript Type= protein_coding
chr18	24162623	24271595	24162623	24271595	-	transcript625.chr18.nic@OSBPL1A	transcript625.chr18.nic	protein_coding	24271518,24239220,24225042,24196125,24181145,24179738,24178013,24172376,24171409,24170327,24167329,24166579,24165065,24162623	24271595,24239382,24225198,24196200,24181279,24179835,24178195,24172483,24171498,24170453,24167445,24166702,24165155,24163281	Gene ID= ENSG00000141447.17 TPM= 3.7 Transcript Type= NA
chr18	24162045	24272164	24162045	24272164	-	transcript634.chr18.nnic@OSBPL1A	transcript634.chr18.nnic	protein_coding	24271622,24239220,24225042,24196125,24181145,24179738,24178013,24171409,24170327,24167329,24166579,24165065,24162045	24272164,24239382,24225198,24196200,24181279,24179835,24178195,24171498,24170453,24167445,24166702,24165155,24163281	Gene ID= ENSG00000141447.17 TPM= 4.66 Transcript Type= NA
chr18	24426616	24453535	24426616	24453535	+	ENST00000284202.8@IMPACT	ENST00000284202.8	protein_coding	24426616,24427919,24428869,24430322,24437955,24440496,24443049,24445393,24448093,24449819,24450779	24426792,24428047,24428921,24430384,24438040,24440618,24443152,24445466,24448183,24449953,24453535	Gene ID= ENSG00000154059.9 TPM= 20.27 Transcript Type= protein_coding
chr18	26016253	26090625	26016253	26090625	-	ENST00000415083.6@SS18	ENST00000415083.6	protein_coding	26090501,26087501,26078076,26057589,26052624,26039289,26038555,26035831,26035005,26032399,26016253	26090625,26087577,26078160,26057742,26052845,26039456,26038659,26035923,26035127,26032532,26018380	Gene ID= ENSG00000141380.13 TPM= 18.34 Transcript Type= protein_coding
chr18	26225936	26391685	26225936	26391685	+	ENST00000269142.9@TAF4B	ENST00000269142.9	protein_coding	26225936,26265170,26267516,26274663,26274931,26281971,26285882,26292246,26293426,26315229,26321070,26327015,26335175,26357690,26389845	26227276,26265315,26267623,26274824,26275053,26282060,26286499,26292381,26293531,26315398,26321200,26327140,26335231,26357794,26391685	Gene ID= ENSG00000141384.12 TPM= 11.58 Transcript Type= protein_coding
chr18	26852038	26865818	26852038	26865818	-	ENST00000383168.8@AQP4	ENST00000383168.8	protein_coding	26865658,26862182,26861131,26860772,26852038	26865818,26862596,26861295,26860852,26856489	Gene ID= ENSG00000171885.13 TPM= 23.17 Transcript Type= protein_coding
chr18	31498043	31549008	31498043	31549008	+	ENST00000261590.12@DSG2	ENST00000261590.12	protein_coding	31498043,31518239,31519803,31520803,31521099,31522083,31524448,31524703,31530987,31535270,31536202,31538751,31541193,31542520,31545721	31498296,31518274,31519937,31520964,31521243,31522249,31524585,31524888,31531252,31535412,31536429,31538978,31541314,31542852,31549008	Gene ID= ENSG00000046604.12 TPM= 2.9 Transcript Type= protein_coding
chr18	31701751	31724639	31701751	31724639	-	transcript672.chr18.nnic@NA	transcript672.chr18.nnic	NA	31724494,31701751	31724639,31702837	Gene ID= novel_gene_chr18_673 TPM= 1.93 Transcript Type= NA
chr18	31724403	31727239	31724403	31727239	+	transcript674.chr18.nnic@NA	transcript674.chr18.nnic	NA	31724403	31727239	Gene ID= novel_gene_chr18_675 TPM= 3.86 Transcript Type= NA
chr18	32091855	32131561	32091855	32131561	+	transcript691.chr18.nnic@RNF138	transcript691.chr18.nnic	protein_coding	32091855,32092700,32111754,32113745,32123518,32124734,32126693,32129119,32131025	32092235,32092886,32111919,32113860,32123574,32124845,32126800,32130976,32131561	Gene ID= ENSG00000134758.13 TPM= 3.46 Transcript Type= NA
chr18	32091855	32131561	32091855	32131561	+	ENST00000261593.7@RNF138	ENST00000261593.7	protein_coding	32091855,32092700,32111754,32113745,32123518,32124734,32126693,32129119	32092235,32092886,32111919,32113860,32123574,32124845,32126800,32131561	Gene ID= ENSG00000134758.13 TPM= 1.21 Transcript Type= protein_coding
chr18	32092688	32131561	32092688	32131561	+	transcript695.chr18.nnic@RNF138	transcript695.chr18.nnic	protein_coding	32092688,32111754,32113745,32123518,32124734,32126693,32129119,32131025	32092886,32111919,32113860,32123574,32124845,32126800,32130976,32131561	Gene ID= ENSG00000134758.13 TPM= 5.39 Transcript Type= NA
chr18	32092022	32131561	32092022	32131561	+	transcript697.chr18.nnic@RNF138	transcript697.chr18.nnic	protein_coding	32092022,32092700,32123518,32124734,32126693,32129119,32131025	32092235,32092886,32123574,32124845,32126800,32130976,32131561	Gene ID= ENSG00000134758.13 TPM= 2.25 Transcript Type= NA
chr18	34493725	34891353	34493725	34891353	+	transcript705.chr18.nnic@DTNA	transcript705.chr18.nnic	protein_coding	34493725,34656922,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34848296,34851831,34858285,34863966,34866111,34875239,34877719,34879551,34882069,34884728,34890300	34494021,34657019,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34848383,34851928,34858398,34864062,34866131,34875398,34877808,34879719,34882201,34884776,34891353	Gene ID= ENSG00000134769.21 TPM= 1.93 Transcript Type= NA
chr18	34593308	34891353	34593308	34891353	+	transcript707.chr18.nic@DTNA	transcript707.chr18.nic	protein_coding	34593308,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34848296,34851831,34858285,34863966,34866111,34875239,34877719,34879551,34882069,34884728,34890300	34593538,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34848383,34851928,34858398,34864062,34866131,34875398,34877808,34879719,34882201,34884776,34891353	Gene ID= ENSG00000134769.21 TPM= 1.93 Transcript Type= NA
chr18	34493265	34867335	34493265	34867335	+	transcript711.chr18.nic@DTNA	transcript711.chr18.nic	protein_coding	34493265,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34848296,34851831,34858285,34863966,34866111	34493514,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34848383,34851928,34858398,34864062,34867335	Gene ID= ENSG00000134769.21 TPM= 4.34 Transcript Type= NA
chr18	34593366	34867335	34593366	34867335	+	transcript712.chr18.nic@DTNA	transcript712.chr18.nic	protein_coding	34593366,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34848296,34851831,34858285,34863966,34866111	34593538,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34848383,34851928,34858398,34864062,34867335	Gene ID= ENSG00000134769.21 TPM= 5.31 Transcript Type= NA
chr18	34593344	34829328	34593344	34829328	+	transcript727.chr18.nnic@DTNA	transcript727.chr18.nnic	protein_coding	34593344,34595786,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34829041	34593538,34595918,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34829328	Gene ID= ENSG00000134769.21 TPM= 1.93 Transcript Type= NA
chr18	34493703	34829328	34493703	34829328	+	transcript730.chr18.nic@DTNA	transcript730.chr18.nic	protein_coding	34493703,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34829041	34494021,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34829328	Gene ID= ENSG00000134769.21 TPM= 6.76 Transcript Type= NA
chr18	34710266	34829328	34710266	34829328	+	transcript733.chr18.nic@DTNA	transcript733.chr18.nic	protein_coding	34710266,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34829041	34710445,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34829328	Gene ID= ENSG00000134769.21 TPM= 1.93 Transcript Type= NA
chr18	34838101	34867335	34838101	34867335	+	transcript736.chr18.nic@DTNA	transcript736.chr18.nic	protein_coding	34838101,34848296,34851831,34858285,34863966,34866111	34838171,34848383,34851928,34858398,34864062,34867335	Gene ID= ENSG00000134769.21 TPM= 2.9 Transcript Type= NA
chr18	34493317	34829328	34493317	34829328	+	ENST00000315456.10@DTNA	ENST00000315456.10	protein_coding	34493317,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34825267,34827593,34829041	34493514,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34825275,34827676,34829328	Gene ID= ENSG00000134769.21 TPM= 3.86 Transcript Type= protein_coding
chr18	34593358	34829328	34593358	34829328	+	ENST00000554864.7@DTNA	ENST00000554864.7	protein_coding	34593358,34679468,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34829041	34593538,34679592,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34829328	Gene ID= ENSG00000134769.21 TPM= 4.83 Transcript Type= protein_coding
chr18	34865691	34868168	34865691	34868168	+	transcript746.chr18.nnic@NA	transcript746.chr18.nnic	NA	34865691	34868168	Gene ID= novel_gene_chr18_747 TPM= 1.93 Transcript Type= NA
chr18	34976511	34976981	34976511	34976981	-	transcript760.chr18.nnic@NA	transcript760.chr18.nnic	NA	34976511	34976981	Gene ID= novel_gene_chr18_761 TPM= 1.93 Transcript Type= NA
chr18	34976928	35143466	34976928	35143466	+	ENST00000413393.5@MAPRE2	ENST00000413393.5	protein_coding	34976928,35005492,35070195,35097446,35101946,35126948,35132032,35140295	34977079,35005553,35070322,35097591,35102159,35127087,35132190,35143466	Gene ID= ENSG00000166974.12 TPM= 12.07 Transcript Type= protein_coding
chr18	35041360	35143470	35041360	35143470	+	ENST00000300249.9@MAPRE2	ENST00000300249.9	protein_coding	35041360,35070195,35097446,35101946,35126948,35132032,35140295	35041661,35070322,35097591,35102159,35127087,35132190,35143470	Gene ID= ENSG00000166974.12 TPM= 16.89 Transcript Type= protein_coding
chr18	35241037	35249803	35241037	35249803	+	ENST00000330501.11@ZNF397	ENST00000330501.11	protein_coding	35241037,35242391,35243152,35245262	35241109,35242884,35243293,35249803	Gene ID= ENSG00000186812.12 TPM= 2.9 Transcript Type= protein_coding
chr18	35241037	35244100	35241037	35244100	+	ENST00000591206.5@ZNF397	ENST00000591206.5	protein_coding	35241037,35242391,35243152	35241109,35242884,35244100	Gene ID= ENSG00000186812.12 TPM= 1.93 Transcript Type= protein_coding
chr18	35241057	35244069	35241057	35244069	+	ENST00000585800.1@ZNF397	ENST00000585800.1	protein_coding	35241057,35242391,35243152	35241690,35242884,35244069	Gene ID= ENSG00000186812.12 TPM= 1.93 Transcript Type= protein_coding
chr18	35251066	35290221	35251066	35290221	-	transcript774.chr18.nic@ZSCAN30	transcript774.chr18.nic	protein_coding	35290131,35263945,35263513,35251066	35290221,35264455,35263657,35254381	Gene ID= ENSG00000186814.13 TPM= 4.34 Transcript Type= NA
chr18	35251066	35290208	35251066	35290208	-	ENST00000333206.9@ZSCAN30	ENST00000333206.9	protein_coding	35290084,35263945,35263513,35251066	35290208,35264455,35263657,35254381	Gene ID= ENSG00000186814.13 TPM= 3.38 Transcript Type= protein_coding
chr18	35290282	35310766	35290282	35310766	+	ENST00000399070.3@ZNF271P	ENST00000399070.3	transcribed_unitary_pseudogene	35290282,35291010,35305976	35290391,35291232,35310766	Gene ID= ENSG00000257267.3 TPM= 2.9 Transcript Type= processed_transcript
chr18	35290336	35308110	35290336	35308110	+	ENST00000638208.1@ZNF271P	ENST00000638208.1	transcribed_unitary_pseudogene	35290336,35305976	35290391,35308110	Gene ID= ENSG00000257267.3 TPM= 7.72 Transcript Type= processed_transcript
chr18	35337213	35344472	35337213	35344472	-	transcript808.chr18.nic@ZNF24	transcript808.chr18.nic	protein_coding	35344370,35340231,35337213	35344472,35340733,35339976	Gene ID= ENSG00000172466.15 TPM= 5.79 Transcript Type= NA
chr18	35332227	35344456	35332227	35344456	-	ENST00000399061.3@ZNF24	ENST00000399061.3	protein_coding	35344370,35340231,35339829,35332227	35344456,35340733,35339976,35337770	Gene ID= ENSG00000172466.15 TPM= 7.72 Transcript Type= protein_coding
chr18	35468333	35497991	35468333	35497991	-	ENST00000334598.11@INO80C	ENST00000334598.11	protein_coding	35497719,35480453,35479300,35478282,35468333	35497991,35480563,35479411,35478349,35468742	Gene ID= ENSG00000153391.15 TPM= 2.9 Transcript Type= protein_coding
chr18	35581207	35710991	35581207	35710991	+	transcript824.chr18.nnic@GALNT1	transcript824.chr18.nnic	protein_coding	35581207,35654658,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624	35581862,35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35710991	Gene ID= ENSG00000141429.13 TPM= 2.9 Transcript Type= NA
chr18	35581078	35710991	35581078	35710991	+	transcript828.chr18.nic@GALNT1	transcript828.chr18.nic	protein_coding	35581078,35654560,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624	35581862,35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35710991	Gene ID= ENSG00000141429.13 TPM= 23.24 Transcript Type= NA
chr18	35654560	35711834	35654560	35711834	+	ENST00000269195.5@GALNT1	ENST00000269195.5	protein_coding	35654560,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624	35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35711834	Gene ID= ENSG00000141429.13 TPM= 2.9 Transcript Type= protein_coding
chr18	35972083	35979278	35972083	35979278	+	ENST00000592875.5@C18orf21	ENST00000592875.5	protein_coding	35972083,35972885,35974896,35977410,35978835	35972805,35972907,35975095,35977600,35979278	Gene ID= ENSG00000141428.16 TPM= 12.55 Transcript Type= protein_coding
chr18	35972625	35979286	35972625	35979286	+	ENST00000610527.4@C18orf21	ENST00000610527.4	protein_coding	35972625,35974896,35977410,35978835	35972840,35975095,35977600,35979286	Gene ID= ENSG00000141428.16 TPM= 1.93 Transcript Type= protein_coding
chr18	35989824	36067554	35989824	36067554	-	transcript851.chr18.nnic@RPRD1A	transcript851.chr18.nnic	protein_coding	36067254,36030991,36030808,36027184,36026900,35989824	36067554,36031097,36030905,36027310,36027075,35993300	Gene ID= ENSG00000141425.17 TPM= 1.93 Transcript Type= NA
chr18	36024549	36067588	36024549	36067588	-	transcript852.chr18.nic@RPRD1A	transcript852.chr18.nic	protein_coding	36067254,36033708,36030991,36030808,36027184,36024549	36067588,36033837,36031097,36030905,36027310,36027075	Gene ID= ENSG00000141425.17 TPM= 1.93 Transcript Type= NA
chr18	35989824	36067576	35989824	36067576	-	ENST00000399022.8@RPRD1A	ENST00000399022.8	protein_coding	36067254,36033708,36030991,36030808,36027184,36026900,35989824	36067576,36033837,36031097,36030905,36027310,36027075,35993300	Gene ID= ENSG00000141425.17 TPM= 45.37 Transcript Type= protein_coding
chr18	36109148	36129381	36109148	36129381	-	ENST00000590986.5@SLC39A6	ENST00000590986.5	protein_coding	36129101,36126219,36124520,36123495,36122052,36116674,36114097,36112501,36111059,36109148	36129381,36127016,36124700,36123664,36122270,36116779,36114474,36112581,36111249,36109745	Gene ID= ENSG00000141424.12 TPM= 1.93 Transcript Type= protein_coding
chr18	36108532	36129318	36108532	36129318	-	ENST00000269187.9@SLC39A6	ENST00000269187.9	protein_coding	36129114,36126219,36124520,36123495,36122052,36116674,36114097,36112501,36111059,36108532	36129318,36127016,36124700,36123664,36122270,36116779,36114474,36112581,36111249,36109745	Gene ID= ENSG00000141424.12 TPM= 8.69 Transcript Type= protein_coding
chr18	36129899	36174651	36129899	36174651	+	transcript862.chr18.nnic@ELP2	transcript862.chr18.nnic	protein_coding	36129899,36133238,36136307,36138270,36138795,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36170333,36171047,36174485	36130071,36133316,36136377,36138426,36138872,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36170438,36171160,36174651	Gene ID= ENSG00000134759.13 TPM= 2.9 Transcript Type= NA
chr18	36129900	36174651	36129900	36174651	+	transcript882.chr18.nic@ELP2	transcript882.chr18.nic	protein_coding	36129900,36133238,36136307,36138270,36138795,36141137,36142281,36142826,36144939,36145948,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36171047,36174485	36130071,36133316,36136377,36138426,36138872,36141201,36142347,36142966,36145034,36146048,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36171160,36174651	Gene ID= ENSG00000134759.13 TPM= 2.9 Transcript Type= NA
chr18	36129898	36174651	36129898	36174651	+	ENST00000442325.6@ELP2	ENST00000442325.6	protein_coding	36129898,36133238,36136307,36138270,36138795,36139419,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36171047,36174485	36130071,36133316,36136377,36138426,36138872,36139613,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36171160,36174651	Gene ID= ENSG00000134759.13 TPM= 15.44 Transcript Type= protein_coding
chr18	36794106	36829195	36794106	36829195	-	ENST00000334295.8@TPGS2	ENST00000334295.8	protein_coding	36828683,36818894,36807847,36805374,36800198,36798449,36794106	36829195,36818973,36807934,36805502,36800311,36798609,36797050	Gene ID= ENSG00000134779.14 TPM= 10.62 Transcript Type= protein_coding
chr18	36829117	37225324	36829117	37225324	+	ENST00000280020.9@KIAA1328	ENST00000280020.9	protein_coding	36829117,36834320,36835234,36844208,36885557,36959308,37066890,37160200,37172973,37222017	36829196,36834355,36835376,36844302,36885672,36959435,37067545,37160381,37173081,37225324	Gene ID= ENSG00000150477.14 TPM= 1.93 Transcript Type= protein_coding
chr18	45063461	45064823	45063461	45064823	+	transcript930.chr18.nnic@NA	transcript930.chr18.nnic	NA	45063461	45064823	Gene ID= novel_gene_chr18_931 TPM= 4.83 Transcript Type= NA
chr18	45983536	46072256	45983536	46072256	-	transcript939.chr18.nnic@PSTPIP2	transcript939.chr18.nnic	protein_coding	46072156,46039947,46015903,46011181,46005469,45999436,45998794,45997749,45993605,45992106,45991902,45990722,45988702,45983536	46072256,46040047,46015937,46011287,46005531,45999534,45998839,45997828,45993703,45992202,45991983,45990756,45988759,45985450	Gene ID= ENSG00000152229.18 TPM= 2.9 Transcript Type= NA
chr18	45983536	46072260	45983536	46072260	-	ENST00000409746.5@PSTPIP2	ENST00000409746.5	protein_coding	46072156,46039947,46024609,46015903,46011181,46005469,45999436,45998794,45997749,45993605,45992106,45991902,45990722,45988702,45983536	46072260,46040047,46024686,46015937,46011287,46005531,45999534,45998839,45997828,45993703,45992202,45991983,45990756,45988759,45985450	Gene ID= ENSG00000152229.18 TPM= 37.65 Transcript Type= protein_coding
chr18	46084150	46098284	46084150	46098284	-	transcript941.chr18.nnic@ATP5A1	transcript941.chr18.nnic	protein_coding	46098172,46095053,46093179,46091682,46089823,46089566,46088109,46087341,46087008,46086387,46086113,46084504,46084150	46098284,46095131,46093365,46091851,46089996,46089732,46088257,46087492,46087232,46086494,46086257,46084654,46084363	Gene ID= ENSG00000152234.15 TPM= 54.06 Transcript Type= NA
chr18	46080248	46098353	46080248	46098353	-	ENST00000398752.10@ATP5A1	ENST00000398752.10	protein_coding	46098172,46095053,46091682,46089823,46089566,46088109,46087341,46087008,46086387,46086113,46084504,46080248	46098353,46095131,46091851,46089996,46089732,46088257,46087492,46087232,46086494,46086257,46084654,46084363	Gene ID= ENSG00000152234.15 TPM= 1337.44 Transcript Type= protein_coding
chr18	46104332	46128333	46104332	46128333	+	ENST00000282058.10@HAUS1	ENST00000282058.10	protein_coding	46104332,46105194,46118181,46119926,46122467,46123299,46124822,46125744,46128075	46104441,46105368,46118316,46120060,46122590,46123364,46124893,46125791,46128333	Gene ID= ENSG00000152240.12 TPM= 5.79 Transcript Type= protein_coding
chr18	46173206	46174948	46173206	46174948	-	transcript964.chr18.nnic@NA	transcript964.chr18.nnic	NA	46173206	46174948	Gene ID= novel_gene_chr18_965 TPM= 9.65 Transcript Type= NA
chr18	46174034	46266983	46174034	46266983	+	ENST00000619301.4@C18orf25	ENST00000619301.4	protein_coding	46174034,46215811,46253697,46262929	46174330,46216595,46253823,46266983	Gene ID= ENSG00000152242.10 TPM= 24.13 Transcript Type= protein_coding
chr18	46174027	46266991	46174027	46266991	+	ENST00000615052.4@C18orf25	ENST00000615052.4	protein_coding	46174027,46215811,46240005,46253697,46262929	46174330,46216595,46240187,46253823,46266991	Gene ID= ENSG00000152242.10 TPM= 2.9 Transcript Type= protein_coding
chr18	46226808	46230082	46226808	46230082	-	transcript966.chr18.nnic@NA	transcript966.chr18.nnic	NA	46226808	46230082	Gene ID= novel_gene_chr18_967 TPM= 2.9 Transcript Type= NA
chr18	46810442	46917503	46810442	46917503	-	transcript969.chr18.nic@PIAS2	transcript969.chr18.nic	protein_coding	46917322,46906227,46903527,46893431,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46827959,46820933,46815312,46810442	46917503,46906315,46903633,46893531,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130,46821072,46815349,46812612	Gene ID= ENSG00000078043.15 TPM= 3.38 Transcript Type= NA
chr18	46808822	46917503	46808822	46917503	-	transcript971.chr18.nic@PIAS2	transcript971.chr18.nic	protein_coding	46917322,46906227,46903527,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46827959,46820933,46815312,46808822	46917503,46906315,46903633,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130,46821072,46815349,46812612	Gene ID= ENSG00000078043.15 TPM= 6.59 Transcript Type= NA
chr18	46811606	46917473	46811606	46917473	-	transcript980.chr18.nnic@PIAS2	transcript980.chr18.nnic	protein_coding	46917322,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46827959,46820933,46818278,46815312,46811606	46917473,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130,46821072,46818447,46815349,46812612	Gene ID= ENSG00000078043.15 TPM= 2.9 Transcript Type= NA
chr18	46826833	46917503	46826833	46917503	-	transcript993.chr18.nic@PIAS2	transcript993.chr18.nic	protein_coding	46917322,46906227,46903527,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46826833	46917503,46906315,46903633,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130	Gene ID= ENSG00000078043.15 TPM= 2.73 Transcript Type= NA
chr18	46821039	46823086	46821039	46823086	+	transcript997.chr18.nnic@NA	transcript997.chr18.nnic	NA	46821039	46823086	Gene ID= novel_gene_chr18_998 TPM= 2.9 Transcript Type= NA
chr18	47107414	47150525	47107414	47150525	-	transcript1017.chr18.nnic@HDHD2	transcript1017.chr18.nnic	protein_coding	47150378,47136339,47134496,47130244,47115229,47107414	47150525,47136449,47134704,47130328,47115348,47108705	Gene ID= ENSG00000167220.11 TPM= 1.93 Transcript Type= NA
chr18	47107408	47150500	47107408	47150500	-	ENST00000588183.5@HDHD2	ENST00000588183.5	protein_coding	47150378,47136302,47134496,47130244,47115132,47112977,47107408	47150500,47136449,47134704,47130328,47115348,47113040,47108785	Gene ID= ENSG00000167220.11 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr18	47107403	47150520	47107403	47150520	-	ENST00000300605.10@HDHD2	ENST00000300605.10	protein_coding	47150378,47136339,47134496,47130244,47115132,47112977,47107403	47150520,47136449,47134704,47130328,47115348,47113040,47108785	Gene ID= ENSG00000167220.11 TPM= 26.06 Transcript Type= protein_coding
chr18	47840255	47931159	47840255	47931159	-	transcript1026.chr18.nnic@SMAD2	transcript1026.chr18.nnic	protein_coding	47930800,47930361,47896521,47889021,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47840255	47931159,47930446,47896809,47889091,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950	Gene ID= ENSG00000175387.15 TPM= 2.25 Transcript Type= NA
chr18	47840255	47931159	47840255	47931159	-	transcript1027.chr18.nic@SMAD2	transcript1027.chr18.nic	protein_coding	47930800,47930361,47920072,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47840255	47931159,47930446,47920169,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950	Gene ID= ENSG00000175387.15 TPM= 3.21 Transcript Type= NA
chr18	47841225	47930850	47841225	47930850	-	transcript1028.chr18.nnic@SMAD2	transcript1028.chr18.nnic	protein_coding	47930800,47930361,47896521,47870475,47869243,47868323,47868052,47865059,47851274,47848475,47845663,47845340,47841225	47930850,47930446,47896809,47870564,47869436,47868457,47868097,47865133,47851327,47848687,47845800,47845484,47841950	Gene ID= ENSG00000175387.15 TPM= 1.93 Transcript Type= NA
chr18	47840255	47931159	47840255	47931159	-	transcript1032.chr18.nic@SMAD2	transcript1032.chr18.nic	protein_coding	47930800,47930361,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47840255	47931159,47930446,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950	Gene ID= ENSG00000175387.15 TPM= 3.7 Transcript Type= NA
chr18	47831551	47931141	47831551	47931141	-	ENST00000402690.6@SMAD2	ENST00000402690.6	protein_coding	47930800,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47831551	47931141,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950	Gene ID= ENSG00000175387.15 TPM= 12.55 Transcript Type= protein_coding
chr18	47845184	47930884	47845184	47930884	-	transcript1049.chr18.nic@SMAD2	transcript1049.chr18.nic	protein_coding	47930800,47930361,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845184	47930884,47930446,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484	Gene ID= ENSG00000175387.15 TPM= 2.9 Transcript Type= NA
chr18	48553662	48556100	48553662	48556100	-	transcript1061.chr18.nnic@NA	transcript1061.chr18.nnic	NA	48553662	48556100	Gene ID= novel_gene_chr18_1062 TPM= 1.93 Transcript Type= NA
chr18	48760186	48862173	48760186	48862173	-	transcript1059.chr18.nnic@AC093567.1	transcript1059.chr18.nnic	antisense_RNA	48859342,48857586,48817219,48760186	48862173,48857641,48817376,48761689	Gene ID= ENSG00000267764.1 TPM= 18.34 Transcript Type= NA
chr18	48949842	48951343	48949842	48951343	+	transcript1068.chr18.nnic@NA	transcript1068.chr18.nnic	NA	48949842	48951343	Gene ID= novel_gene_chr18_1069 TPM= 2.9 Transcript Type= NA
chr18	49041474	49460802	49041474	49460802	-	ENST00000269445.10@DYM	ENST00000269445.10	protein_coding	49460398,49430255,49391593,49379665,49378567,49363161,49333728,49331864,49286434,49281997,49272178,49258380,49257010,49163685,49118744,49097402,49041474	49460802,49430447,49391645,49379758,49378700,49363233,49333853,49332006,49286616,49282175,49272303,49258493,49257104,49163787,49118926,49097515,49044204	Gene ID= ENSG00000141627.13 TPM= 13.44 Transcript Type= protein_coding
chr18	49043133	49460725	49043133	49460725	-	transcript1088.chr18.nnic@DYM	transcript1088.chr18.nnic	protein_coding	49460398,49430255,49391593,49379665,49378567,49363161,49331864,49286434,49281997,49272178,49258380,49257010,49163685,49118744,49097402,49043133	49460725,49430447,49391645,49379758,49378700,49363233,49332006,49286616,49282175,49272303,49258493,49257104,49163787,49118926,49097515,49044204	Gene ID= ENSG00000141627.13 TPM= 3.38 Transcript Type= NA
chr18	49043802	49460725	49043802	49460725	-	transcript1094.chr18.nnic@DYM	transcript1094.chr18.nnic	protein_coding	49460398,49430255,49391593,49379665,49378567,49363161,49333728,49331864,49286434,49281997,49272178,49258380,49257010,49163685,49097402,49043802	49460725,49430447,49391645,49379758,49378700,49363233,49333853,49332006,49286616,49282175,49272303,49258493,49257104,49163787,49097515,49044204	Gene ID= ENSG00000141627.13 TPM= 3.14 Transcript Type= NA
chr18	49481660	49487231	49481660	49487231	-	ENST00000318240.7@C18orf32	ENST00000318240.7	protein_coding	49487043,49483584,49481660	49487231,49483771,49482410	Gene ID= ENSG00000177576.11 TPM= 47.78 Transcript Type= protein_coding
chr18	49483164	49486099	49483164	49486099	+	transcript1117.chr18.nnic@NA	transcript1117.chr18.nnic	NA	49483164	49486099	Gene ID= novel_gene_chr18_1118 TPM= 4.83 Transcript Type= NA
chr18	49488453	49492482	49488453	49492482	-	ENST00000618619.4@RPL17	ENST00000618619.4	protein_coding	49492458,49491746,49491532,49491405,49490793,49490454,49489359,49488453	49492482,49491833,49491584,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 2.7 Transcript Type= protein_coding
chr18	49488484	49492485	49488484	49492485	-	transcript1107.chr18.nic@RPL17	transcript1107.chr18.nic	protein_coding	49492458,49491532,49491405,49490793,49490454,49489359,49488484	49492485,49491833,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 10.28 Transcript Type= NA
chr18	49488484	49492523	49488484	49492523	-	ENST00000580261.5@RPL17	ENST00000580261.5	protein_coding	49492458,49491532,49491405,49490793,49490454,49489359,49488484	49492523,49491584,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 250.06 Transcript Type= protein_coding
chr18	49488484	49491840	49488484	49491840	-	ENST00000579408.5@RPL17	ENST00000579408.5	protein_coding	49491532,49491405,49490793,49490454,49489359,49488484	49491840,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 40.59 Transcript Type= protein_coding
chr18	49488484	49492444	49488484	49492444	-	ENST00000579248.5@RPL17	ENST00000579248.5	protein_coding	49492258,49491532,49491405,49490793,49490454,49489359,49488484	49492444,49491584,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 9.7 Transcript Type= protein_coding
chr18	49488484	49492479	49488484	49492479	-	ENST00000581373.5@RPL17	ENST00000581373.5	protein_coding	49492458,49491532,49490793,49490454,49489359,49488484	49492479,49491584,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 2.32 Transcript Type= protein_coding
chr18	49782167	49813960	49782167	49813960	-	ENST00000285093.14@ACAA2	ENST00000285093.14	protein_coding	49813469,49802687,49797466,49795765,49794280,49792152,49791470,49787291,49785197,49782167	49813960,49802853,49797594,49795881,49794427,49792327,49791599,49787361,49785351,49783931	Gene ID= ENSG00000167315.17 TPM= 2.9 Transcript Type= protein_coding
chr18	49783505	49813953	49783505	49813953	-	ENST00000587994.5@ACAA2	ENST00000587994.5	protein_coding	49813817,49802687,49797466,49795765,49794280,49792152,49791470,49787291,49785197,49783505	49813953,49802853,49797594,49795881,49794427,49792327,49791599,49787361,49785351,49783931	Gene ID= ENSG00000167315.17 TPM= 1.45 Transcript Type= protein_coding
chr18	50268847	50281774	50268847	50281774	-	ENST00000269468.9@MBD1	ENST00000269468.9	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50271469,50268847	50281774,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273471,50272955,50272738,50271540,50269818	Gene ID= ENSG00000141644.17 TPM= 11.14 Transcript Type= protein_coding
chr18	50268844	50281766	50268844	50281766	-	transcript1138.chr18.nic@MBD1	transcript1138.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50268844	50281766,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273471,50272955,50272738,50269811	Gene ID= ENSG00000141644.17 TPM= 3.9 Transcript Type= NA
chr18	50268847	50281774	50268847	50281774	-	ENST00000347968.7@MBD1	ENST00000347968.7	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50273334,50272824,50272677,50271469,50268847	50281774,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50273471,50272955,50272738,50271540,50269818	Gene ID= ENSG00000141644.17 TPM= 3.17 Transcript Type= protein_coding
chr18	50268846	50281769	50268846	50281769	-	ENST00000591416.5@MBD1	ENST00000591416.5	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50268846	50281769,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273471,50272955,50272738,50271540	Gene ID= ENSG00000141644.17 TPM= 1.73 Transcript Type= protein_coding
chr18	50266886	50281766	50266886	50281766	-	transcript1153.chr18.nic@MBD1	transcript1153.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50273334,50272824,50272677,50266886	50281766,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50273471,50272955,50272738,50267663	Gene ID= ENSG00000141644.17 TPM= 5.34 Transcript Type= NA
chr18	50268847	50281766	50268847	50281766	-	transcript1156.chr18.nic@MBD1	transcript1156.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50273334,50272824,50272677,50268847	50281766,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50273471,50272955,50272738,50269818	Gene ID= ENSG00000141644.17 TPM= 4.61 Transcript Type= NA
chr18	50271042	50281766	50271042	50281766	-	transcript1159.chr18.nic@MBD1	transcript1159.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50273334,50272824,50272677,50271042	50281766,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50273426,50272955,50272738,50271540	Gene ID= ENSG00000141644.17 TPM= 3.41 Transcript Type= NA
chr18	50271042	50281766	50271042	50281766	-	transcript1167.chr18.nic@MBD1	transcript1167.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50272824,50272677,50271042	50281766,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50272955,50272738,50271540	Gene ID= ENSG00000141644.17 TPM= 3.41 Transcript Type= NA
chr18	50282347	50287843	50282347	50287843	-	transcript1175.chr18.nnic@CXXC1	transcript1175.chr18.nnic	protein_coding	50287641,50286740,50286539,50286022,50285749,50285325,50285002,50284720,50284378,50283894,50283705,50283515,50283265,50282854,50282347	50287843,50286858,50286639,50286257,50285928,50285351,50285247,50284839,50284562,50284101,50283815,50283564,50283361,50283006,50282739	Gene ID= ENSG00000154832.14 TPM= 1.93 Transcript Type= NA
chr18	50282343	50288304	50282343	50288304	-	ENST00000285106.10@CXXC1	ENST00000285106.10	protein_coding	50287587,50286740,50286539,50286022,50285749,50285325,50285002,50284732,50284378,50283894,50283705,50283515,50283265,50282854,50282343	50288304,50286858,50286639,50286257,50285928,50285351,50285247,50284839,50284562,50284101,50283815,50283564,50283361,50283006,50282739	Gene ID= ENSG00000154832.14 TPM= 28.96 Transcript Type= protein_coding
chr18	50878734	50954257	50878734	50954257	+	ENST00000321341.10@ME2	ENST00000321341.10	protein_coding	50878734,50895809,50908063,50912801,50916168,50917347,50918110,50920456,50920661,50921074,50924098,50925756,50932258,50939570,50940288,50947017	50879308,50895928,50908196,50912950,50916243,50917508,50918213,50920565,50920758,50921187,50924212,50925898,50932360,50939640,50940386,50954257	Gene ID= ENSG00000082212.12 TPM= 29.92 Transcript Type= protein_coding
chr18	50879117	50947865	50879117	50947865	+	ENST00000640967.1@ME2	ENST00000640967.1	protein_coding	50879117,50895809,50908063,50912801,50916168,50917347,50918110,50920456,50920661,50921074,50924098,50925756,50932258,50940288,50947017	50879308,50895928,50908196,50912950,50916243,50917508,50918213,50920565,50920758,50921187,50924212,50925898,50932360,50940386,50947865	Gene ID= ENSG00000082212.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr18	50879166	50947874	50879166	50947874	+	ENST00000639115.1@ME2	ENST00000639115.1	protein_coding	50879166,50895809,50908063,50912801,50917347,50918110,50920456,50920661,50921074,50924098,50925756,50932258,50939570,50940288,50947017	50879308,50895928,50908196,50912950,50917508,50918213,50920565,50920758,50921187,50924212,50925898,50932360,50939640,50940386,50947874	Gene ID= ENSG00000082212.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr18	50967930	50969858	50967930	50969858	+	transcript1223.chr18.nnic@NA	transcript1223.chr18.nnic	NA	50967930	50969858	Gene ID= novel_gene_chr18_1224 TPM= 2.9 Transcript Type= NA
chr18	50968016	50988121	50968016	50988121	+	ENST00000269466.7@ELAC1	ENST00000269466.7	protein_coding	50968016,50974397,50984096,50986619	50968114,50974561,50984563,50988121	Gene ID= ENSG00000141642.8 TPM= 4.83 Transcript Type= protein_coding
chr18	51030209	51079774	51030209	51079774	+	transcript1203.chr18.nic@SMAD4	transcript1203.chr18.nic	protein_coding	51030209,51046920,51048686,51049295,51054781,51058125,51058340,51059866,51065423,51067019,51076638,51077307,51078256	51030623,51047295,51048860,51049324,51054993,51058244,51058456,51059916,51065606,51067187,51076776,51077419,51079774	Gene ID= ENSG00000141646.13 TPM= 14.32 Transcript Type= NA
chr18	51030265	51079777	51030265	51079777	+	transcript1206.chr18.nnic@SMAD4	transcript1206.chr18.nnic	protein_coding	51030265,51044887,51046920,51048686,51049295,51054781,51058125,51058340,51059866,51065423,51067019,51076638,51078256	51030623,51045051,51047295,51048860,51049324,51054993,51058244,51058456,51059916,51065606,51067187,51076776,51079777	Gene ID= ENSG00000141646.13 TPM= 4.18 Transcript Type= NA
chr18	51030213	51085039	51030213	51085039	+	ENST00000342988.7@SMAD4	ENST00000342988.7	protein_coding	51030213,51046920,51048686,51049295,51054781,51058125,51058340,51059866,51065423,51067019,51076638,51078256	51030623,51047295,51048860,51049324,51054993,51058244,51058456,51059916,51065606,51067187,51076776,51085039	Gene ID= ENSG00000141646.13 TPM= 127.9 Transcript Type= protein_coding
chr18	51030209	51079777	51030209	51079777	+	transcript1212.chr18.nnic@SMAD4	transcript1212.chr18.nnic	protein_coding	51030209,51046920,51048686,51049295,51054781,51058125,51058340,51059866,51065423,51076638,51078256	51030623,51047295,51048860,51049324,51054993,51058244,51058456,51059916,51065469,51076776,51079777	Gene ID= ENSG00000141646.13 TPM= 9.01 Transcript Type= NA
chr18	54154840	54224702	54154840	54224702	-	transcript1228.chr18.nic@MBD2	transcript1228.chr18.nic	protein_coding	54224018,54204998,54188874,54187714,54166076,54164523,54159765,54154840	54224702,54205157,54189011,54187837,54166166,54164700,54159903,54155311	Gene ID= ENSG00000134046.11 TPM= 1.93 Transcript Type= NA
chr18	54151601	54224788	54151601	54224788	-	ENST00000256429.7@MBD2	ENST00000256429.7	protein_coding	54224018,54204998,54188874,54166076,54164523,54159765,54151601	54224788,54205157,54189011,54166166,54164700,54159903,54155311	Gene ID= ENSG00000134046.11 TPM= 53.09 Transcript Type= protein_coding
chr18	54269404	54298234	54269404	54298234	+	ENST00000579534.5@POLI	ENST00000579534.5	protein_coding	54269404,54271360,54273926,54277703,54280667,54282837,54283922,54287281,54291833,54293649	54269661,54271485,54274090,54277855,54280903,54283015,54284013,54287411,54292038,54298234	Gene ID= ENSG00000101751.10 TPM= 8.69 Transcript Type= protein_coding
chr18	54269537	54294719	54269537	54294719	+	transcript1239.chr18.nic@POLI	transcript1239.chr18.nic	protein_coding	54269537,54273926,54277703,54280667,54282837,54283922,54287281,54291833,54293649	54269661,54274090,54277855,54280903,54283015,54284013,54287411,54292038,54294719	Gene ID= ENSG00000101751.10 TPM= 1.93 Transcript Type= NA
chr18	54269537	54288545	54269537	54288545	+	transcript1243.chr18.nic@POLI	transcript1243.chr18.nic	protein_coding	54269537,54271360,54273926,54277703,54280667,54282837,54283922,54287281	54269661,54271485,54274090,54277855,54280903,54283015,54284013,54288545	Gene ID= ENSG00000101751.10 TPM= 1.93 Transcript Type= NA
chr18	55222334	55588629	55222334	55588629	-	ENST00000356073.8@TCF4	ENST00000356073.8	protein_coding	55588038,55587045,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55222334	55588629,55587136,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 1.93 Transcript Type= protein_coding
chr18	55227679	55588198	55227679	55588198	-	transcript1255.chr18.nic@TCF4	transcript1255.chr18.nic	protein_coding	55588038,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232509,55228847,55228221,55227679	55588198,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 1.93 Transcript Type= NA
chr18	55227683	55322222	55227683	55322222	-	ENST00000457482.7@TCF4	ENST00000457482.7	protein_coding	55321670,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232509,55228847,55228221,55227683	55322222,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 1.93 Transcript Type= protein_coding
chr18	56599563	56602154	56599563	56602154	-	transcript1272.chr18.nnic@NA	transcript1272.chr18.nnic	NA	56599563	56602154	Gene ID= novel_gene_chr18_1273 TPM= 4.83 Transcript Type= NA
chr18	56602822	56638696	56602822	56638696	-	transcript1280.chr18.nnic@TXNL1	transcript1280.chr18.nnic	protein_coding	56638343,56626361,56624288,56618004,56616245,56614424,56610993,56604436,56602822	56638696,56626457,56624461,56618126,56616314,56614596,56611097,56604478,56603056	Gene ID= ENSG00000091164.12 TPM= 109.84 Transcript Type= NA
chr18	56602824	56651274	56602824	56651274	-	ENST00000587807.5@TXNL1	ENST00000587807.5	protein_coding	56651017,56638343,56626361,56626162,56624288,56618004,56616245,56614424,56610993,56602824	56651274,56639039,56626457,56626266,56624461,56618126,56616314,56614596,56611097,56603056	Gene ID= ENSG00000091164.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr18	57548283	57586656	57548283	57586656	-	transcript1309.chr18.nic@FECH	transcript1309.chr18.nic	protein_coding	57586554,57580073,57573246,57571392,57566447,57562874,57554845,57554260,57551315,57548283	57586656,57580199,57573365,57571540,57566581,57562980,57554952,57554424,57551374,57550846	Gene ID= ENSG00000066926.10 TPM= 1.93 Transcript Type= NA
chr18	57551175	57586678	57551175	57586678	-	transcript1312.chr18.nic@FECH	transcript1312.chr18.nic	protein_coding	57586554,57580073,57573246,57571392,57566447,57562874,57559145,57554845,57554260,57551175	57586678,57580199,57573365,57571540,57566581,57562980,57559243,57554952,57554424,57551374	Gene ID= ENSG00000066926.10 TPM= 1.93 Transcript Type= NA
chr18	57549510	57586654	57549510	57586654	-	ENST00000382873.7@FECH	ENST00000382873.7	protein_coding	57586554,57580055,57573246,57571392,57566447,57562874,57559145,57554845,57554260,57551315,57549510	57586654,57580199,57573365,57571540,57566581,57562980,57559243,57554952,57554424,57551374,57550846	Gene ID= ENSG00000066926.10 TPM= 16.41 Transcript Type= protein_coding
chr18	57600656	57622173	57600656	57622173	-	ENST00000256854.9@NARS	ENST00000256854.9	protein_coding	57621708,57620569,57615817,57615641,57613602,57611637,57609357,57607444,57607134,57606616,57605857,57602812,57602355,57600656	57622173,57620651,57615975,57615730,57613680,57611707,57609443,57607665,57607333,57606751,57605970,57602943,57602486,57601783	Gene ID= ENSG00000134440.11 TPM= 294.03 Transcript Type= protein_coding
chr18	57600656	57621800	57600656	57621800	-	transcript1323.chr18.nic@NARS	transcript1323.chr18.nic	protein_coding	57621708,57620569,57615817,57615641,57613602,57611637,57609357,57607444,57607134,57606616,57605857,57602355,57600656	57621800,57620651,57615975,57615730,57613680,57611707,57609443,57607665,57607333,57606751,57605970,57602943,57601783	Gene ID= ENSG00000134440.11 TPM= 14.09 Transcript Type= NA
chr18	58255438	58397402	58255438	58397402	+	transcript1334.chr18.nic@NEDD4L	transcript1334.chr18.nic	protein_coding	58255438,58315982,58322425,58323232,58324996,58328995,58330738,58333818,58342906,58349537,58350991,58357194,58364268,58365999,58367746,58370397,58373174,58383246,58385526,58387439,58389085,58390646,58391487,58396167	58256774,58316032,58322486,58323334,58325162,58329127,58330914,58333892,58343103,58349614,58351045,58357252,58364333,58366228,58367867,58370467,58373269,58383319,58385586,58387498,58389192,58390742,58391559,58397402	Gene ID= ENSG00000049759.17 TPM= 3.86 Transcript Type= NA
chr18	58255438	58396573	58255438	58396573	+	transcript1335.chr18.nnic@NEDD4L	transcript1335.chr18.nnic	protein_coding	58255438,58315982,58322425,58323232,58324996,58328995,58330738,58333818,58349537,58350991,58351146,58357194,58364268,58365999,58367746,58370397,58373174,58383246,58385526,58387439,58389085,58390646,58391487,58396167	58256774,58316032,58322486,58323334,58325162,58329127,58330914,58333892,58349614,58351045,58351199,58357252,58364333,58366228,58367867,58370467,58373269,58383319,58385586,58387498,58389192,58390742,58391559,58396573	Gene ID= ENSG00000049759.17 TPM= 3.86 Transcript Type= NA
chr18	58255438	58398157	58255438	58398157	+	transcript1339.chr18.nic@NEDD4L	transcript1339.chr18.nic	protein_coding	58255438,58315982,58322425,58323232,58324996,58328995,58330738,58333818,58349537,58350991,58357194,58364268,58365999,58367746,58370397,58373174,58383246,58385526,58387439,58389085,58390646,58391487,58396167	58256774,58316032,58322486,58323334,58325162,58329127,58330914,58333892,58349614,58351045,58357252,58364333,58366228,58367867,58370467,58373269,58383319,58385586,58387498,58389192,58390742,58391559,58398157	Gene ID= ENSG00000049759.17 TPM= 2.41 Transcript Type= NA
chr18	58255516	58334544	58255516	58334544	+	transcript1342.chr18.nic@NEDD4L	transcript1342.chr18.nic	protein_coding	58255516,58315982,58322425,58323232,58324996,58328995,58330738,58333818	58256774,58316032,58322486,58323334,58325162,58329127,58330914,58334544	Gene ID= ENSG00000049759.17 TPM= 2.9 Transcript Type= NA
chr18	58481247	58628957	58481247	58628957	-	ENST00000361673.3@ALPK2	ENST00000361673.3	protein_coding	58628764,58611689,58607322,58578814,58534834,58529091,58523935,58523806,58516908,58514993,58503931,58498049,58481247	58628957,58611817,58607439,58580548,58538224,58529238,58524062,58523841,58517182,58515081,58504148,58498097,58482039	Gene ID= ENSG00000198796.6 TPM= 18.34 Transcript Type= protein_coding
chr18	58671386	58754477	58671386	58754477	+	ENST00000348428.7@MALT1	ENST00000348428.7	protein_coding	58671386,58681170,58696366,58700441,58709378,58709976,58710921,58714083,58715935,58723048,58733397,58734307,58735202,58741865,58744338,58745666,58747405	58671852,58681336,58696487,58700591,58709556,58710072,58710953,58714109,58715967,58723251,58733574,58734381,58735329,58742014,58744495,58745791,58754477	Gene ID= ENSG00000172175.12 TPM= 2.9 Transcript Type= protein_coding
chr18	58863613	58985944	58863613	58985944	+	ENST00000589288.5@ZNF532	ENST00000589288.5	protein_coding	58863613,58865470,58918271,58934433,58939445,58948067,58953518,58979055,58981470,58983972	58863686,58865579,58920633,58934614,58939621,58948229,58953799,58979167,58981617,58985944	Gene ID= ENSG00000074657.13 TPM= 16.41 Transcript Type= protein_coding
chr18	59139477	59158836	59139477	59158836	+	ENST00000587834.5@SEC11C	ENST00000587834.5	protein_coding	59139477,59149513,59152536,59155688,59157608,59158632	59140035,59149622,59152685,59155807,59157665,59158836	Gene ID= ENSG00000166562.8 TPM= 16.41 Transcript Type= protein_coding
chr18	59327823	59359962	59327823	59359962	-	ENST00000251047.5@LMAN1	ENST00000251047.5	protein_coding	59359031,59355504,59355313,59354519,59353202,59349113,59347513,59345919,59338760,59338557,59333091,59331418,59327823	59359962,59355658,59355420,59354580,59353301,59349236,59347571,59346051,59338953,59338627,59333244,59331539,59331129	Gene ID= ENSG00000074695.5 TPM= 48.27 Transcript Type= protein_coding
chr18	59356681	59357982	59356681	59357982	+	transcript1395.chr18.nnic@NA	transcript1395.chr18.nnic	NA	59356681	59357982	Gene ID= novel_gene_chr18_1396 TPM= 3.86 Transcript Type= NA
chr18	59899948	59904306	59899948	59904306	+	ENST00000316660.6@PMAIP1	ENST00000316660.6	protein_coding	59899948,59902647	59900235,59904306	Gene ID= ENSG00000141682.11 TPM= 2.9 Transcript Type= protein_coding
chr18	62044236	62187056	62044236	62187056	-	ENST00000638977.1@PIGN	ENST00000638977.1	protein_coding	62186844,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62044236	62187056,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 1.93 Transcript Type= protein_coding
chr18	62187264	62307112	62187264	62307112	+	transcript1412.chr18.nnic@KIAA1468	transcript1412.chr18.nnic	protein_coding	62187264,62211153,62221037,62221219,62221384,62227289,62227598,62228305,62231194,62232332,62232577,62244764,62252664,62255407,62257948,62258512,62261511,62263989,62264729,62266701,62268869,62273980,62275374,62279774,62280646,62282306,62287351,62291543,62298790,62305414	62188031,62211242,62221108,62221274,62221497,62227492,62227689,62228598,62231269,62232427,62232600,62244876,62252754,62255478,62258088,62258676,62261658,62264145,62264852,62266749,62268948,62274086,62275473,62279856,62280709,62282444,62287467,62291631,62298860,62307112	Gene ID= ENSG00000134444.13 TPM= 7.24 Transcript Type= NA
chr18	62187258	62307112	62187258	62307112	+	ENST00000256858.10@KIAA1468	ENST00000256858.10	protein_coding	62187258,62211153,62221037,62221219,62221384,62227289,62227598,62228305,62231194,62232332,62244764,62252664,62255407,62257948,62258512,62261511,62263989,62264729,62266701,62268869,62269411,62273980,62275374,62279774,62280646,62282306,62287351,62291543,62298790,62305414	62188031,62211242,62221108,62221274,62221497,62227492,62227689,62228598,62231269,62232427,62244876,62252754,62255478,62258088,62258676,62261658,62264145,62264852,62266749,62268948,62269512,62274086,62275473,62279856,62280709,62282444,62287467,62291631,62298860,62307112	Gene ID= ENSG00000134444.13 TPM= 1.45 Transcript Type= protein_coding
chr18	62523134	62564602	62523134	62564602	+	transcript1420.chr18.nic@ZCCHC2	transcript1420.chr18.nic	protein_coding	62523134,62539681,62542498,62544802,62550348,62556203,62558687,62560587,62563009,62564571	62524363,62539792,62542574,62544873,62550460,62556297,62558770,62560644,62563144,62564602	Gene ID= ENSG00000141664.9 TPM= 2.9 Transcript Type= NA
chr18	62523063	62564602	62523063	62564602	+	transcript1421.chr18.nic@ZCCHC2	transcript1421.chr18.nic	protein_coding	62523063,62539681,62542498,62550348,62556203,62558687,62560587,62563009,62564571	62524363,62539792,62542574,62550460,62556297,62558770,62560644,62563144,62564602	Gene ID= ENSG00000141664.9 TPM= 2.9 Transcript Type= NA
chr18	62715450	62980433	62715450	62980433	+	ENST00000262719.9@PHLPP1	ENST00000262719.9	protein_coding	62715450,62830035,62838784,62860435,62895011,62895781,62902964,62905224,62914913,62919959,62941718,62945109,62958629,62963368,62972514,62975397,62978262	62717259,62830231,62838909,62860601,62895157,62896011,62903166,62905284,62915008,62920114,62941918,62945271,62958759,62963472,62972708,62975625,62980433	Gene ID= ENSG00000081913.13 TPM= 5.79 Transcript Type= protein_coding
chr18	63123346	63320128	63123346	63320128	-	ENST00000398117.1@BCL2	ENST00000398117.1	protein_coding	63318082,63123346	63320128,63128759	Gene ID= ENSG00000171791.12 TPM= 7.72 Transcript Type= protein_coding
chr18	63367328	63381629	63367328	63381629	+	ENST00000589905.1@AC036176.1	ENST00000589905.1	antisense_RNA	63367328,63381377	63367859,63381629	Gene ID= ENSG00000267390.1 TPM= 1.93 Transcript Type= antisense_RNA
chr18	63389190	63422463	63389190	63422463	-	ENST00000238497.9@VPS4B	ENST00000238497.9	protein_coding	63422233,63411467,63410290,63407432,63403707,63400547,63400048,63399242,63397034,63393409,63389190	63422463,63411578,63410446,63407499,63403826,63400703,63400196,63399323,63397253,63393549,63391076	Gene ID= ENSG00000119541.9 TPM= 6.76 Transcript Type= protein_coding
chr18	63970029	63989371	63970029	63989371	+	ENST00000353706.6@SERPINB8	ENST00000353706.6	protein_coding	63970029,63978299,63979801,63981721,63983579,63985093,63986874	63970187,63978476,63979938,63981838,63983721,63985245,63989371	Gene ID= ENSG00000166401.14 TPM= 1.93 Transcript Type= protein_coding
chr18	68673688	68715298	68673688	68715298	-	ENST00000299608.6@TMX3	ENST00000299608.6	protein_coding	68714936,68713846,68711364,68710021,68701745,68700405,68697932,68697226,68691295,68687667,68684428,68684190,68682925,68680981,68679463,68673688	68715298,68713900,68711403,68710144,68701790,68700485,68698031,68697303,68691361,68687765,68684485,68684243,68682981,68681110,68679531,68677193	Gene ID= ENSG00000166479.9 TPM= 28.96 Transcript Type= protein_coding
chr18	68673688	68715136	68673688	68715136	-	transcript1458.chr18.nic@TMX3	transcript1458.chr18.nic	protein_coding	68714936,68713846,68711364,68710021,68701745,68697932,68697226,68691295,68687667,68684428,68684190,68682925,68680981,68679463,68673688	68715136,68713900,68711403,68710144,68701790,68698031,68697303,68691361,68687765,68684485,68684243,68682981,68681110,68679531,68677193	Gene ID= ENSG00000166479.9 TPM= 3.86 Transcript Type= NA
chr18	70287904	70289601	70287904	70289601	-	transcript1471.chr18.nnic@NA	transcript1471.chr18.nnic	NA	70287904	70289601	Gene ID= novel_gene_chr18_1472 TPM= 2.9 Transcript Type= NA
chr18	70288901	70330200	70288901	70330200	+	ENST00000397942.3@SOCS6	ENST00000397942.3	protein_coding	70288901,70324543	70289090,70330200	Gene ID= ENSG00000170677.5 TPM= 12.55 Transcript Type= protein_coding
chr18	74148495	74159297	74148495	74159297	+	transcript1479.chr18.nnic@TIMM21	transcript1479.chr18.nnic	protein_coding	74148495,74155145,74155306,74158014,74158171,74158376	74149109,74155224,74155403,74158087,74158276,74159297	Gene ID= ENSG00000075336.11 TPM= 3.86 Transcript Type= NA
chr18	74148495	74160531	74148495	74160531	+	transcript1484.chr18.nic@TIMM21	transcript1484.chr18.nic	protein_coding	74148495,74155145,74155306,74158014,74158171	74149109,74155207,74155403,74158087,74160531	Gene ID= ENSG00000075336.11 TPM= 2.9 Transcript Type= NA
chr18	74148495	74158786	74148495	74158786	+	transcript1485.chr18.nic@TIMM21	transcript1485.chr18.nic	protein_coding	74148495,74155145,74158014,74158171,74158376	74149109,74155403,74158087,74158276,74158786	Gene ID= ENSG00000075336.11 TPM= 2.9 Transcript Type= NA
chr18	74253297	74291935	74253297	74291935	-	ENST00000494131.6@CYB5A	ENST00000494131.6	protein_coding	74291747,74263349,74260915,74256830,74255741,74253297	74291935,74263477,74260944,74256853,74255775,74253665	Gene ID= ENSG00000166347.18 TPM= 10.62 Transcript Type= protein_coding
chr18	74496208	74523454	74496208	74523454	+	ENST00000324262.8@CNDP2	ENST00000324262.8	protein_coding	74496208,74499882,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74518949,74519999	74496431,74500033,74501472,74506011,74508928,74511013,74512532,74513719,74516392,74518640,74519096,74523454	Gene ID= ENSG00000133313.14 TPM= 45.85 Transcript Type= protein_coding
chr18	74496346	74521121	74496346	74521121	+	transcript1493.chr18.nic@CNDP2	transcript1493.chr18.nic	protein_coding	74496346,74499882,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74518949,74519999	74496431,74500033,74501472,74506011,74508928,74511233,74512532,74513719,74516392,74518640,74519096,74521121	Gene ID= ENSG00000133313.14 TPM= 4.83 Transcript Type= NA
chr18	74496307	74521131	74496307	74521131	+	ENST00000579847.5@CNDP2	ENST00000579847.5	protein_coding	74496307,74499937,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74518949,74519999	74496431,74500033,74501472,74506011,74508928,74511013,74512532,74513719,74516392,74518640,74519096,74521131	Gene ID= ENSG00000133313.14 TPM= 33.3 Transcript Type= protein_coding
chr18	74591774	74597824	74591774	74597824	-	ENST00000580048.1@LINC00909	ENST00000580048.1	lincRNA	74596428,74591774	74597824,74593839	Gene ID= ENSG00000264247.1 TPM= 3.86 Transcript Type= lincRNA
chr18	75208483	75209588	75208483	75209588	-	transcript1521.chr18.nnic@NA	transcript1521.chr18.nnic	NA	75208483	75209588	Gene ID= novel_gene_chr18_1522 TPM= 3.86 Transcript Type= NA
chr18	76822350	76881482	76822350	76881482	+	transcript1531.chr18.nic@ZNF236	transcript1531.chr18.nic	protein_coding	76822350,76849526,76851775,76868685,76871701,76875492,76878009,76880113,76881284	76822662,76849668,76851939,76868863,76871825,76875664,76878152,76880316,76881482	Gene ID= ENSG00000130856.15 TPM= 2.9 Transcript Type= NA
chr18	76978834	77132112	76978834	77132112	-	transcript1537.chr18.nic@MBP	transcript1537.chr18.nic	protein_coding	77131539,77105211,77066298,77016832,76989956,76988877,76984775,76978834	77132112,77105286,77066385,77017268,76990060,76988912,76984894,76980471	Gene ID= ENSG00000197971.14 TPM= 2.85 Transcript Type= NA
chr18	76978834	77132794	76978834	77132794	-	transcript1538.chr18.nic@MBP	transcript1538.chr18.nic	protein_coding	77132580,77105211,77066298,77016832,76989956,76988877,76984775,76978834	77132794,77105286,77066385,77017268,76990060,76988912,76984894,76980471	Gene ID= ENSG00000197971.14 TPM= 20.22 Transcript Type= NA
chr18	76978834	77087652	76978834	77087652	-	transcript1539.chr18.nic@MBP	transcript1539.chr18.nic	protein_coding	77087346,77066298,77016832,76989956,76988877,76984775,76978834	77087652,77066385,77017268,76990060,76988912,76984894,76980471	Gene ID= ENSG00000197971.14 TPM= 5.74 Transcript Type= NA
chr18	76978834	77132818	76978834	77132818	-	ENST00000355994.6@MBP	ENST00000355994.6	protein_coding	77132580,77105211,77066298,77016832,76989956,76988877,76988495,76984775,76978834	77132818,77105286,77066385,77017268,76990060,76988912,76988527,76984894,76980471	Gene ID= ENSG00000197971.14 TPM= 7.67 Transcript Type= protein_coding
chr18	76978861	77017086	76978861	77017086	-	ENST00000397865.9@MBP	ENST00000397865.9	protein_coding	77016832,76989956,76988877,76984775,76978861	77017086,76990060,76988912,76984894,76980471	Gene ID= ENSG00000197971.14 TPM= 4.05 Transcript Type= protein_coding
chr18	77012779	77132769	77012779	77132769	-	ENST00000397860.7@MBP	ENST00000397860.7	protein_coding	77132580,77105211,77066298,77012779	77132769,77105286,77066385,77017268	Gene ID= ENSG00000197971.14 TPM= 7.72 Transcript Type= protein_coding
chr18	79069394	79378283	79069394	79378283	+	ENST00000426216.6@ATP9B	ENST00000426216.6	protein_coding	79069394,79096476,79110355,79113241,79126267,79143802,79154504,79176813,79193183,79206937,79213962,79253381,79277054,79303604,79306986,79329141,79330012,79336628,79337279,79342268,79344265,79345428,79345775,79347770,79348132,79359354,79372825,79373898,79375394,79377247	79069529,79096649,79110505,79113354,79126375,79143860,79154555,79176907,79193263,79207012,79214038,79253541,79277196,79303716,79307234,79329302,79330104,79336711,79337449,79342366,79344354,79345572,79345839,79347925,79348196,79359462,79372882,79374101,79375426,79378283	Gene ID= ENSG00000166377.19 TPM= 1.93 Transcript Type= protein_coding
chr18	79395930	79470014	79395930	79470014	+	ENST00000591814.5@NFATC1	ENST00000591814.5	protein_coding	79395930,79410403,79433579,79448782,79450954,79451676,79461311,79467450	79396351,79411501,79433738,79448984,79451126,79451816,79461366,79470014	Gene ID= ENSG00000131196.17 TPM= 2.25 Transcript Type= protein_coding
chr18	79400336	79529323	79400336	79529323	+	ENST00000329101.8@NFATC1	ENST00000329101.8	protein_coding	79400336,79410403,79433579,79448782,79450954,79451676,79461311,79467450,79486248,79527528	79400479,79411501,79433738,79448984,79451126,79451816,79461366,79467582,79486937,79529323	Gene ID= ENSG00000131196.17 TPM= 36.52 Transcript Type= protein_coding
chr18	79400333	79468001	79400333	79468001	+	ENST00000592223.5@NFATC1	ENST00000592223.5	protein_coding	79400333,79410403,79433579,79448782,79450954,79451676,79461311,79467450	79400479,79411501,79433738,79448984,79451126,79451816,79461366,79468001	Gene ID= ENSG00000131196.17 TPM= 26.86 Transcript Type= protein_coding
chr18	79677287	79679358	79677287	79679358	-	ENST00000616428.1@AC068473.5	ENST00000616428.1	lincRNA	79677287	79679358	Gene ID= ENSG00000274828.1 TPM= 9.65 Transcript Type= lincRNA
chr18	79679846	79754503	79679846	79754503	+	ENST00000075430.11@CTDP1	ENST00000075430.11	protein_coding	79679846,79695225,79695977,79697860,79704767,79710346,79712972,79714491,79717535,79717810,79736355,79753652	79680261,79695308,79696070,79697988,79704917,79710436,79713138,79715528,79717676,79718016,79736521,79754503	Gene ID= ENSG00000060069.16 TPM= 19.31 Transcript Type= protein_coding
chr18	79897179	79902877	79897179	79902877	-	transcript1641.chr18.nnic@NA	transcript1641.chr18.nnic	NA	79897179	79902877	Gene ID= novel_gene_chr18_1642 TPM= 3.86 Transcript Type= NA
chr18	79902420	79951730	79902420	79951730	-	transcript1596.chr18.nic@PQLC1	transcript1596.chr18.nic	protein_coding	79951581,79950724,79943329,79933969,79930228,79919184,79902420	79951730,79951025,79943462,79934022,79930311,79919400,79904183	Gene ID= ENSG00000122490.18 TPM= 23.02 Transcript Type= NA
chr18	79902420	79951665	79902420	79951665	-	transcript1627.chr18.nnic@PQLC1	transcript1627.chr18.nnic	protein_coding	79951581,79950724,79943329,79933969,79902420	79951665,79951025,79943462,79934022,79904183	Gene ID= ENSG00000122490.18 TPM= 34.47 Transcript Type= NA
chr18	79902420	79951664	79902420	79951664	-	ENST00000397778.6@PQLC1	ENST00000397778.6	protein_coding	79951581,79950724,79943329,79933969,79919184,79902420	79951664,79951025,79943462,79934022,79919400,79904183	Gene ID= ENSG00000122490.18 TPM= 344.78 Transcript Type= protein_coding
chr18	79902420	79951638	79902420	79951638	-	ENST00000357575.8@PQLC1	ENST00000357575.8	protein_coding	79951581,79950724,79943329,79919184,79902420	79951638,79951025,79943462,79919400,79904183	Gene ID= ENSG00000122490.18 TPM= 23.99 Transcript Type= protein_coding
chr18	79964561	79970822	79964561	79970822	+	ENST00000451882.2@HSBP1L1	ENST00000451882.2	protein_coding	79964561,79966612,79968089,79970440	79964786,79966678,79968183,79970822	Gene ID= ENSG00000226742.3 TPM= 9.65 Transcript Type= protein_coding
chr18	79964582	79970805	79964582	79970805	+	transcript1655.chr18.nic@HSBP1L1	transcript1655.chr18.nic	protein_coding	79964582,79966612,79970440	79964786,79968183,79970805	Gene ID= ENSG00000226742.3 TPM= 4.83 Transcript Type= NA
chr18	79970811	79988593	79970811	79988593	-	ENST00000269601.9@TXNL4A	ENST00000269601.9	protein_coding	79988240,79977598,79970811	79988593,79977701,79973856	Gene ID= ENSG00000141759.14 TPM= 30.89 Transcript Type= protein_coding
chr18	79973406	79988581	79973406	79988581	-	transcript1657.chr18.nic@TXNL4A	transcript1657.chr18.nic	protein_coding	79988240,79986602,79973406	79988581,79986750,79973856	Gene ID= ENSG00000141759.14 TPM= 2.9 Transcript Type= NA
chr18	79973407	79988541	79973407	79988541	-	ENST00000588162.1@TXNL4A	ENST00000588162.1	protein_coding	79988240,79973407	79988541,79973856	Gene ID= ENSG00000141759.14 TPM= 6.76 Transcript Type= protein_coding
chr18	79973525	79988536	79973525	79988536	-	ENST00000355491.5@TXNL4A	ENST00000355491.5	protein_coding	79988240,79977598,79976718,79973525	79988536,79977701,79976787,79973856	Gene ID= ENSG00000141759.14 TPM= 21.24 Transcript Type= nonsense_mediated_decay
chr18	80034358	80046392	80034358	80046392	+	ENST00000306735.9@RBFA	ENST00000306735.9	protein_coding	80034358,80036668,80037330,80038505,80042135,80044212,80045774	80034653,80036710,80037506,80038617,80042219,80044285,80046392	Gene ID= ENSG00000101546.12 TPM= 33.79 Transcript Type= protein_coding
chr18	80034466	80046397	80034466	80046397	+	ENST00000262197.7@RBFA	ENST00000262197.7	protein_coding	80034466,80036668,80037330,80038505,80044212,80045774	80034653,80036710,80037506,80038617,80044285,80046397	Gene ID= ENSG00000101546.12 TPM= 3.86 Transcript Type= protein_coding
chr18	80109031	80140351	80109031	80140351	+	ENST00000262198.8@ADNP2	ENST00000262198.8	protein_coding	80109031,80117530,80133103,80135612	80109472,80117650,80133192,80140351	Gene ID= ENSG00000101544.8 TPM= 8.69 Transcript Type= protein_coding
chr19	65822	70945	65822	70945	-	ENST00000632089.1@WASH5P	ENST00000632089.1	transcribed_processed_pseudogene	70928,66346,65822	70945,66499,66047	Gene ID= ENSG00000282458.1 TPM= 1.93 Transcript Type= processed_transcript
chr19	305573	344796	305573	344796	-	transcript7.chr19.nic@MIER2	transcript7.chr19.nic	protein_coding	344774,334400,327864,327133,326507,325635,313492,312191,311845,308801,308577,307119,305573	344796,334542,327989,327256,326598,325704,313643,312272,311939,308925,308665,307536,306711	Gene ID= ENSG00000105556.11 TPM= 10.62 Transcript Type= NA
chr19	405438	409170	405438	409170	-	ENST00000332235.7@C2CD4C	ENST00000332235.7	protein_coding	409006,405438	409170,408401	Gene ID= ENSG00000183186.7 TPM= 7.72 Transcript Type= protein_coding
chr19	416589	491637	416589	491637	-	transcript11.chr19.nnic@SHC2	transcript11.chr19.nnic	protein_coding	491132,490247,440862,438970,438718,436630,436380,436165,434709,430684,425097,422146,418923,416589	491637,490353,440932,439030,438837,436683,436431,436291,434865,430747,425231,422396,419056,417322	Gene ID= ENSG00000129946.10 TPM= 2.51 Transcript Type= NA
chr19	416589	491637	416589	491637	-	transcript13.chr19.nnic@SHC2	transcript13.chr19.nnic	protein_coding	491132,490247,440862,438970,438718,436630,436380,436165,434709,430684,425097,422146,418923,416589	491637,490353,440932,439030,438837,436683,436431,436291,434865,430747,425231,422456,419056,417322	Gene ID= ENSG00000129946.10 TPM= 2.51 Transcript Type= NA
chr19	416589	491637	416589	491637	-	transcript15.chr19.nnic@SHC2	transcript15.chr19.nnic	protein_coding	491132,490247,440862,438970,438718,436380,436165,434709,430684,425097,422146,418923,416589	491637,490353,440932,439030,438837,436683,436291,434865,430747,425231,422456,419056,417322	Gene ID= ENSG00000129946.10 TPM= 2.51 Transcript Type= NA
chr19	416589	491637	416589	491637	-	transcript19.chr19.nnic@SHC2	transcript19.chr19.nnic	protein_coding	491132,490247,425097,422146,418923,416589	491637,490353,425231,422456,419056,417322	Gene ID= ENSG00000129946.10 TPM= 2.51 Transcript Type= NA
chr19	416583	460996	416583	460996	-	ENST00000264554.10@SHC2	ENST00000264554.10	protein_coding	460529,440862,438970,438718,436630,436380,436165,434709,430684,425097,422146,418923,416583	460996,440932,439030,438837,436683,436431,436291,434865,430747,425231,422456,419056,417322	Gene ID= ENSG00000129946.10 TPM= 12.16 Transcript Type= protein_coding
chr19	463346	475010	463346	475010	-	transcript21.chr19.nnic@ODF3L2	transcript21.chr19.nnic	protein_coding	474514,472394,467649,463346	475010,472501,467762,464364	Gene ID= ENSG00000181781.9 TPM= 3.86 Transcript Type= NA
chr19	463346	491637	463346	491637	-	transcript23.chr19.nnic@ODF3L2	transcript23.chr19.nnic	protein_coding	491132,490247,467649,463346	491637,490353,467762,464364	Gene ID= ENSG00000181781.9 TPM= 3.86 Transcript Type= NA
chr19	463346	474983	463346	474983	-	ENST00000315489.4@ODF3L2	ENST00000315489.4	protein_coding	474621,472394,467649,463346	474983,472501,467762,464364	Gene ID= ENSG00000181781.9 TPM= 1.93 Transcript Type= protein_coding
chr19	463346	474880	463346	474880	-	ENST00000382696.7@ODF3L2	ENST00000382696.7	protein_coding	474621,467649,463346	474880,467762,464364	Gene ID= ENSG00000181781.9 TPM= 2.9 Transcript Type= protein_coding
chr19	507497	519654	507497	519654	+	ENST00000359315.6@TPGS1	ENST00000359315.6	protein_coding	507497,518889	507844,519654	Gene ID= ENSG00000141933.9 TPM= 63.71 Transcript Type= protein_coding
chr19	531715	542092	531715	542092	+	transcript37.chr19.nnic@CDC34	transcript37.chr19.nnic	protein_coding	531715,536243,537013,541339	532108,536340,537147,542092	Gene ID= ENSG00000099804.8 TPM= 58.4 Transcript Type= NA
chr19	535837	542087	535837	542087	+	ENST00000606065.3@CDC34	ENST00000606065.3	protein_coding	535837,536243,537013,541346	535923,536340,537147,542087	Gene ID= ENSG00000099804.8 TPM= 11.1 Transcript Type= protein_coding
chr19	572565	583490	572565	583490	+	ENST00000333511.7@BSG	ENST00000333511.7	protein_coding	572565,577774,579500,580379,580646,581315,582306,582514,582750	572701,578121,579656,580461,580782,581591,582330,582582,583490	Gene ID= ENSG00000172270.18 TPM= 43.44 Transcript Type= protein_coding
chr19	572578	583493	572578	583493	+	ENST00000353555.8@BSG	ENST00000353555.8	protein_coding	572578,579500,580379,580646,581315,582306,582514,582750	572701,579656,580461,580782,581591,582330,582582,583493	Gene ID= ENSG00000172270.18 TPM= 342.69 Transcript Type= protein_coding
chr19	617224	633604	617224	633604	-	ENST00000588649.6@POLRMT	ENST00000588649.6	protein_coding	633425,632834,629540,625124,624719,623454,622821,622582,622149,621058,620365,619958,619586,619210,618997,618705,618488,617777,617570,617419,617224	633604,632938,630168,625254,624905,623603,622985,622752,622373,621846,620487,620080,619765,619296,619110,618760,618586,617849,617655,617480,617323	Gene ID= ENSG00000099821.13 TPM= 296.83 Transcript Type= protein_coding
chr19	617224	633583	617224	633583	-	transcript55.chr19.nnic@POLRMT	transcript55.chr19.nnic	protein_coding	633425,632834,629540,625124,624719,623454,622821,622582,622149,621058,620365,619958,619586,619210,618997,618705,618488,617777,617570,617419,617224	633583,632938,630168,625254,624905,623603,622985,622752,622373,621846,620487,620080,619687,619296,619110,618760,618586,617849,617655,617480,617323	Gene ID= ENSG00000099821.13 TPM= 22.68 Transcript Type= NA
chr19	617224	633583	617224	633583	-	transcript62.chr19.nic@POLRMT	transcript62.chr19.nic	protein_coding	633425,632834,629540,625124,624719,623454,622821,622582,622149,621058,620365,619958,619586,619210,618997,618705,618488,617570,617419,617224	633583,632938,630168,625254,624905,623603,622985,622752,622373,621846,620487,620080,619765,619296,619110,618760,618586,617849,617480,617323	Gene ID= ENSG00000099821.13 TPM= 18.34 Transcript Type= NA
chr19	645626	647223	645626	647223	-	transcript91.chr19.nnic@NA	transcript91.chr19.nnic	NA	645626	647223	Gene ID= novel_gene_chr19_92 TPM= 1.93 Transcript Type= NA
chr19	647529	663214	647529	663214	-	transcript76.chr19.nnic@RNF126	transcript76.chr19.nnic	protein_coding	663047,652826,652233,651692,650234,649679,648882,648372,647529	663214,652884,652296,651822,650296,649748,648975,648487,648277	Gene ID= ENSG00000070423.17 TPM= 11.58 Transcript Type= NA
chr19	647529	663214	647529	663214	-	transcript79.chr19.nnic@RNF126	transcript79.chr19.nnic	protein_coding	663047,652826,652233,651611,650234,649679,648882,648372,647529	663214,652884,652296,651855,650296,649748,649052,648487,648277	Gene ID= ENSG00000070423.17 TPM= 13.51 Transcript Type= NA
chr19	647526	663277	647526	663277	-	ENST00000292363.9@RNF126	ENST00000292363.9	protein_coding	663047,652826,652233,651611,650234,649679,648882,648372,647526	663277,652884,652296,651855,650296,649748,648975,648487,648277	Gene ID= ENSG00000070423.17 TPM= 117.29 Transcript Type= protein_coding
chr19	647526	663194	647526	663194	-	ENST00000605891.5@RNF126	ENST00000605891.5	protein_coding	663047,652826,652233,651611,650234,649679,648882,648372,647526	663194,652884,652296,651915,650296,649748,648975,648487,648277	Gene ID= ENSG00000070423.17 TPM= 13.03 Transcript Type= nonsense_mediated_decay
chr19	676365	683399	676365	683399	+	ENST00000166139.8@FSTL3	ENST00000166139.8	protein_coding	676365,677792,680274,681333,681650	676526,677977,680489,681560,683399	Gene ID= ENSG00000070404.9 TPM= 5.79 Transcript Type= protein_coding
chr19	680707	683392	680707	683392	+	ENST00000592947.5@FSTL3	ENST00000592947.5	protein_coding	680707,681333,681650	680879,681560,683392	Gene ID= ENSG00000070404.9 TPM= 3.86 Transcript Type= protein_coding
chr19	709101	748329	709101	748329	+	ENST00000338448.9@PALM	ENST00000338448.9	protein_coding	709101,726138,727008,727564,731095,734173,736019,740352,746285	709151,726189,727088,727694,731245,734194,736078,740483,748329	Gene ID= ENSG00000099864.17 TPM= 3.86 Transcript Type= protein_coding
chr19	797075	812327	797075	812327	+	ENST00000356948.10@PTBP1	ENST00000356948.10	protein_coding	797075,799413,803561,804036,804292,804532,804829,805013,805492,806408,807869,808360,808546,810543,810694	797505,799443,803636,804208,804438,804702,804939,805187,805569,806556,807902,808452,808762,810620,812327	Gene ID= ENSG00000011304.19 TPM= 18.34 Transcript Type= protein_coding
chr19	797425	812312	797425	812312	+	ENST00000349038.8@PTBP1	ENST00000349038.8	protein_coding	797425,799413,803561,804036,804292,804532,804829,805013,806408,807869,808360,808546,810543,810694	797505,799443,803636,804208,804438,804702,804939,805187,806556,807902,808452,808762,810620,812312	Gene ID= ENSG00000011304.19 TPM= 14.48 Transcript Type= protein_coding
chr19	859643	863630	859643	863630	+	ENST00000327726.10@CFD	ENST00000327726.10	protein_coding	859643,860617,860861,861699,863092	859744,860773,861005,861956,863630	Gene ID= ENSG00000197766.7 TPM= 5.79 Transcript Type= protein_coding
chr19	859664	863238	859664	863238	+	ENST00000592860.2@CFD	ENST00000592860.2	protein_coding	859664,860617,860861,861699,863092	859765,860773,861005,861956,863238	Gene ID= ENSG00000197766.7 TPM= 1.93 Transcript Type= protein_coding
chr19	867630	893218	867630	893218	-	ENST00000395808.7@MED16	ENST00000395808.7	protein_coding	893086,890963,890137,889638,885770,884903,881559,879937,876974,875244,873449,871926,871037,868863,867630	893218,891149,890244,889807,886201,885008,881714,880148,877180,875454,873582,872118,871253,868946,868499	Gene ID= ENSG00000175221.14 TPM= 11.42 Transcript Type= protein_coding
chr19	867964	893218	867964	893218	-	ENST00000325464.5@MED16	ENST00000325464.5	protein_coding	893086,890963,890137,889638,885770,884903,881559,879937,876974,875244,873449,871926,871037,868863,868416,867964	893218,891149,890244,889807,886201,885008,881714,880148,877180,875454,873582,872118,871253,868946,868499,868251	Gene ID= ENSG00000175221.14 TPM= 23 Transcript Type= protein_coding
chr19	896503	913231	896503	913231	-	ENST00000361574.9@R3HDM4	ENST00000361574.9	protein_coding	913087,901976,901422,900829,900061,899601,899440,896503	913231,902130,901546,900952,900146,899686,899495,897540	Gene ID= ENSG00000198858.9 TPM= 59.85 Transcript Type= protein_coding
chr19	896504	913226	896504	913226	-	transcript181.chr19.nnic@R3HDM4	transcript181.chr19.nnic	protein_coding	913087,901976,901422,900829,900061,899440,896504	913226,902130,901546,900952,900146,899495,897540	Gene ID= ENSG00000198858.9 TPM= 20.27 Transcript Type= NA
chr19	926037	975934	926037	975934	+	ENST00000263620.7@ARID3A	ENST00000263620.7	protein_coding	926037,929262,932418,960092,964248,964833,966572,968405,971878	926059,929896,932742,960164,964431,965080,966868,968503,975934	Gene ID= ENSG00000116017.10 TPM= 5.79 Transcript Type= protein_coding
chr19	1009650	1021143	1009650	1021143	-	transcript134.chr19.nic@TMEM259	transcript134.chr19.nic	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011367,1011096,1009650	1021143,1014473,1013340,1012573,1012188,1011992,1011798,1011612,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 24.69 Transcript Type= NA
chr19	1009650	1021127	1009650	1021127	-	transcript143.chr19.nic@TMEM259	transcript143.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011367,1011096,1009650	1021127,1014473,1013340,1012573,1011992,1011798,1011612,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 15.17 Transcript Type= NA
chr19	1009650	1021140	1009650	1021140	-	transcript145.chr19.nic@TMEM259	transcript145.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011367,1011096,1009650	1021140,1014473,1013340,1012573,1011992,1011798,1011663,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 38.33 Transcript Type= NA
chr19	1009650	1021209	1009650	1021209	-	transcript152.chr19.nic@TMEM259	transcript152.chr19.nic	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011096,1009650	1021209,1014473,1013340,1012573,1012188,1011992,1011798,1011663,1011499,1010895	Gene ID= ENSG00000182087.12 TPM= 16.11 Transcript Type= NA
chr19	1009650	1021127	1009650	1021127	-	transcript159.chr19.nic@TMEM259	transcript159.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011580,1011367,1011096,1009650	1021127,1014473,1013340,1012573,1011992,1011798,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 12.27 Transcript Type= NA
chr19	1009650	1021209	1009650	1021209	-	transcript165.chr19.nic@TMEM259	transcript165.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011096,1009650	1021209,1014473,1013340,1012573,1011992,1011798,1011663,1011499,1010895	Gene ID= ENSG00000182087.12 TPM= 26.85 Transcript Type= NA
chr19	1009648	1021179	1009648	1021179	-	ENST00000356663.7@TMEM259	ENST00000356663.7	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011367,1011096,1009648	1021179,1014473,1013340,1012573,1012188,1011992,1011798,1011663,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 117.36 Transcript Type= protein_coding
chr19	1026581	1039068	1026581	1039068	+	ENST00000263097.8@CNN2	ENST00000263097.8	protein_coding	1026581,1031071,1032392,1032559,1036130,1036416,1037625	1026724,1031192,1032458,1032696,1036246,1036562,1039068	Gene ID= ENSG00000064666.14 TPM= 3.86 Transcript Type= protein_coding
chr19	1067166	1086628	1067166	1086628	+	ENST00000313093.6@ARHGAP45	ENST00000313093.6	protein_coding	1067166,1068414,1073149,1073506,1073674,1073948,1074104,1074343,1074614,1074799,1077857,1079703,1079928,1080255,1080464,1080682,1080892,1081550,1081824,1082840,1083143,1084238,1085660	1067495,1068744,1073292,1073590,1073746,1074014,1074241,1074407,1074724,1074879,1078045,1079840,1080118,1080379,1080547,1080786,1081064,1081738,1081961,1083066,1083353,1084346,1086628	Gene ID= ENSG00000180448.10 TPM= 4.83 Transcript Type= protein_coding
chr19	1067498	1086628	1067498	1086628	+	ENST00000586866.5@ARHGAP45	ENST00000586866.5	protein_coding	1067498,1068414,1073149,1073506,1073674,1073948,1074104,1074343,1074614,1074799,1077857,1079703,1079928,1080255,1080464,1080682,1080892,1081550,1081824,1082840,1083143,1084238,1085660	1067674,1068744,1073292,1073590,1073746,1074014,1074241,1074407,1074724,1074879,1078045,1079840,1080118,1080379,1080547,1080786,1081064,1081738,1081961,1083066,1083353,1084346,1086628	Gene ID= ENSG00000180448.10 TPM= 2.9 Transcript Type= protein_coding
chr19	1085109	1087558	1085109	1087558	-	transcript200.chr19.nnic@NA	transcript200.chr19.nnic	NA	1085109	1087558	Gene ID= novel_gene_chr19_201 TPM= 4.83 Transcript Type= NA
chr19	1088164	1095386	1088164	1095386	-	transcript192.chr19.nnic@POLR2E	transcript192.chr19.nnic	protein_coding	1095259,1093904,1091792,1090908,1090087,1089884,1089472,1088529,1088164	1095386,1094078,1091907,1090988,1090145,1089962,1089551,1088720,1088264	Gene ID= ENSG00000099817.11 TPM= 6.11 Transcript Type= NA
chr19	1086579	1095357	1086579	1095357	-	ENST00000615234.4@POLR2E	ENST00000615234.4	protein_coding	1095259,1093904,1091792,1090908,1090087,1089884,1089472,1086579	1095357,1094078,1091907,1090988,1090145,1089962,1089551,1088720	Gene ID= ENSG00000099817.11 TPM= 5.15 Transcript Type= protein_coding
chr19	1088163	1095374	1088163	1095374	-	ENST00000215587.11@POLR2E	ENST00000215587.11	protein_coding	1095259,1093904,1091792,1090908,1090087,1089884,1089472,1088163	1095374,1094078,1091907,1090988,1090145,1089962,1089573,1088720	Gene ID= ENSG00000099817.11 TPM= 155.9 Transcript Type= nonsense_mediated_decay
chr19	1088148	1095375	1088148	1095375	-	ENST00000589737.5@POLR2E	ENST00000589737.5	protein_coding	1095259,1091792,1090908,1090087,1089884,1089472,1088148	1095375,1091907,1090988,1090145,1089962,1089551,1088720	Gene ID= ENSG00000099817.11 TPM= 34.59 Transcript Type= nonsense_mediated_decay
chr19	1103937	1106790	1103937	1106790	+	ENST00000354171.12@GPX4	ENST00000354171.12	protein_coding	1103937,1105186,1105366,1105658,1106242,1106400,1106540	1104127,1105280,1105510,1105809,1106266,1106459,1106790	Gene ID= ENSG00000167468.16 TPM= 86.08 Transcript Type= protein_coding
chr19	1104020	1106779	1104020	1106779	+	transcript217.chr19.nic@GPX4	transcript217.chr19.nic	protein_coding	1104020,1105186,1105366,1105658,1106242,1106400,1106540	1104929,1105280,1105510,1105809,1106266,1106459,1106779	Gene ID= ENSG00000167468.16 TPM= 18.78 Transcript Type= NA
chr19	1104052	1106779	1104052	1106779	+	ENST00000611653.4@GPX4	ENST00000611653.4	protein_coding	1104052,1105186,1105366,1105658,1106242,1106400,1106540	1104127,1105280,1105510,1105809,1106266,1106459,1106779	Gene ID= ENSG00000167468.16 TPM= 296.54 Transcript Type= protein_coding
chr19	1104073	1106788	1104073	1106788	+	ENST00000588919.5@GPX4	ENST00000588919.5	protein_coding	1104073,1105186,1105366,1105658,1106242,1106378,1106540	1104127,1105280,1105510,1105809,1106266,1106459,1106788	Gene ID= ENSG00000167468.16 TPM= 4.1 Transcript Type= protein_coding
chr19	1104650	1106787	1104650	1106787	+	ENST00000622390.4@GPX4	ENST00000622390.4	protein_coding	1104650,1105186,1105366,1105406,1105658,1106242,1106400,1106540	1104929,1105280,1105402,1105510,1105809,1106266,1106459,1106787	Gene ID= ENSG00000167468.16 TPM= 19.9 Transcript Type= protein_coding
chr19	1105454	1106779	1105454	1106779	+	ENST00000585480.1@GPX4	ENST00000585480.1	protein_coding	1105454,1105658,1106242,1106400,1106573	1105510,1105809,1106266,1106459,1106779	Gene ID= ENSG00000167468.16 TPM= 5.87 Transcript Type= non_stop_decay
chr19	1107637	1154990	1107637	1154990	-	transcript203.chr19.nnic@SBNO2	transcript203.chr19.nnic	protein_coding	1154925,1154184,1149369,1147309,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107637	1154990,1154402,1149442,1147420,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704	Gene ID= ENSG00000064932.15 TPM= 16.73 Transcript Type= NA
chr19	1107637	1155185	1107637	1155185	-	transcript204.chr19.nic@SBNO2	transcript204.chr19.nic	protein_coding	1155086,1154184,1149369,1147309,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107637	1155185,1154402,1149442,1147420,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704	Gene ID= ENSG00000064932.15 TPM= 24.45 Transcript Type= NA
chr19	1107636	1174283	1107636	1174283	-	ENST00000361757.7@SBNO2	ENST00000361757.7	protein_coding	1174172,1154184,1149369,1147309,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107636	1174283,1154402,1149442,1147420,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704	Gene ID= ENSG00000064932.15 TPM= 40.86 Transcript Type= protein_coding
chr19	1107637	1132221	1107637	1132221	-	ENST00000438103.6@SBNO2	ENST00000438103.6	protein_coding	1132090,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107637	1132221,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704	Gene ID= ENSG00000064932.15 TPM= 13.51 Transcript Type= protein_coding
chr19	1172991	1175010	1172991	1175010	+	transcript227.chr19.nnic@NA	transcript227.chr19.nnic	NA	1172991,1174560	1173135,1175010	Gene ID= novel_gene_chr19_228 TPM= 1.93 Transcript Type= NA
chr19	1172991	1175010	1172991	1175010	+	transcript267.chr19.nnic@NA	transcript267.chr19.nnic	NA	1172991,1174560	1173135,1175010	Gene ID= novel_gene_chr19_268 TPM= 2.9 Transcript Type= NA
chr19	1205720	1228095	1205720	1228095	+	transcript235.chr19.nic@STK11	transcript235.chr19.nic	protein_coding	1205720,1218417,1219324,1220373,1220581,1221213,1221949,1222985,1226454,1226603,1227593	1207203,1218500,1219413,1220505,1220717,1221340,1222006,1223172,1226600,1226663,1228095	Gene ID= ENSG00000118046.14 TPM= 193.54 Transcript Type= NA
chr19	1206464	1228435	1206464	1228435	+	ENST00000326873.11@STK11	ENST00000326873.11	protein_coding	1206464,1218417,1219324,1220373,1220581,1221213,1221949,1222985,1226454,1227593	1207203,1218500,1219413,1220505,1220717,1221340,1222006,1223172,1226663,1228435	Gene ID= ENSG00000118046.14 TPM= 27.03 Transcript Type= protein_coding
chr19	1212843	1215164	1212843	1215164	-	transcript270.chr19.nnic@NA	transcript270.chr19.nnic	NA	1212843	1215164	Gene ID= novel_gene_chr19_271 TPM= 1.93 Transcript Type= NA
chr19	1241746	1244825	1241746	1244825	+	ENST00000395633.5@ATP5D	ENST00000395633.5	protein_coding	1241746,1242456,1244097,1244315,1244737	1241991,1242609,1244185,1244440,1244825	Gene ID= ENSG00000099624.7 TPM= 740.39 Transcript Type= protein_coding
chr19	1241750	1244826	1241750	1244826	+	ENST00000215375.6@ATP5D	ENST00000215375.6	protein_coding	1241750,1242456,1244097,1244315	1241991,1242609,1244185,1244826	Gene ID= ENSG00000099624.7 TPM= 249.77 Transcript Type= protein_coding
chr19	1241817	1244825	1241817	1244825	+	ENST00000588538.5@ATP5D	ENST00000588538.5	protein_coding	1241817,1244097,1244315	1242609,1244185,1244825	Gene ID= ENSG00000099624.7 TPM= 10.14 Transcript Type= retained_intron
chr19	1241820	1244786	1241820	1244786	+	ENST00000591660.5@ATP5D	ENST00000591660.5	protein_coding	1241820,1242456,1244097,1244315,1244691	1241991,1242609,1244185,1244440,1244786	Gene ID= ENSG00000099624.7 TPM= 1.77 Transcript Type= protein_coding
chr19	1244058	1244825	1244058	1244825	+	ENST00000614837.1@ATP5D	ENST00000614837.1	protein_coding	1244058,1244315,1244737	1244185,1244440,1244825	Gene ID= ENSG00000099624.7 TPM= 55.99 Transcript Type= retained_intron
chr19	1257968	1259095	1257968	1259095	+	transcript279.chr19.nnic@MIDN	transcript279.chr19.nnic	protein_coding	1257968,1258746	1258696,1259095	Gene ID= ENSG00000167470.12 TPM= 8.69 Transcript Type= NA
chr19	1248553	1259140	1248553	1259140	+	ENST00000300952.6@MIDN	ENST00000300952.6	protein_coding	1248553,1249890,1251562,1251839,1254167,1254902,1255422,1256995	1248660,1250529,1251649,1251901,1254478,1255061,1255694,1259140	Gene ID= ENSG00000167470.12 TPM= 313.73 Transcript Type= protein_coding
chr19	1254273	1256322	1254273	1256322	+	transcript281.chr19.nnic@NA	transcript281.chr19.nnic	NA	1254273	1256322	Gene ID= novel_gene_chr19_282 TPM= 4.83 Transcript Type= NA
chr19	1266653	1273172	1266653	1273172	+	ENST00000586472.5@CIRBP	ENST00000586472.5	protein_coding	1266653,1270928,1271140,1271329,1271551,1271981,1272427	1266701,1271036,1271246,1271467,1271632,1272051,1273172	Gene ID= ENSG00000099622.13 TPM= 13.58 Transcript Type= protein_coding
chr19	1269331	1274810	1269331	1274810	+	transcript299.chr19.nic@CIRBP	transcript299.chr19.nic	protein_coding	1269331,1270928,1271140,1271329,1271551,1271981,1274649	1269410,1271036,1271246,1271467,1271632,1274440,1274810	Gene ID= ENSG00000099622.13 TPM= 16.89 Transcript Type= NA
chr19	1269266	1273172	1269266	1273172	+	ENST00000589710.5@CIRBP	ENST00000589710.5	protein_coding	1269266,1270867,1271140,1271329,1271551,1271981	1269410,1271036,1271246,1271467,1271632,1273172	Gene ID= ENSG00000099622.13 TPM= 2.32 Transcript Type= protein_coding
chr19	1269330	1274807	1269330	1274807	+	transcript312.chr19.nic@CIRBP	transcript312.chr19.nic	protein_coding	1269330,1270867,1271551,1271981	1269410,1271467,1271632,1274807	Gene ID= ENSG00000099622.13 TPM= 13.03 Transcript Type= NA
chr19	1269337	1273172	1269337	1273172	+	ENST00000320936.9@CIRBP	ENST00000320936.9	protein_coding	1269337,1270928,1271140,1271329,1271551,1271981,1272427	1269410,1271036,1271246,1271467,1271632,1272051,1273172	Gene ID= ENSG00000099622.13 TPM= 425.77 Transcript Type= protein_coding
chr19	1269350	1274810	1269350	1274810	+	ENST00000589235.5@CIRBP	ENST00000589235.5	protein_coding	1269350,1270928,1271140,1271329,1271551,1271981,1274307	1269410,1271036,1271246,1271467,1271632,1272051,1274810	Gene ID= ENSG00000099622.13 TPM= 43.44 Transcript Type= protein_coding
chr19	1276054	1279224	1276054	1279224	+	transcript317.chr19.nnic@NA	transcript317.chr19.nnic	NA	1276054	1279224	Gene ID= novel_gene_chr19_318 TPM= 7.72 Transcript Type= NA
chr19	1354967	1378431	1354967	1378431	+	transcript323.chr19.nic@MUM1	transcript323.chr19.nic	protein_coding	1354967,1356324,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1355020,1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431	Gene ID= ENSG00000160953.15 TPM= 14.24 Transcript Type= NA
chr19	1354985	1378431	1354985	1378431	+	transcript325.chr19.nic@MUM1	transcript325.chr19.nic	protein_coding	1354985,1356324,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1355135,1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431	Gene ID= ENSG00000160953.15 TPM= 4.59 Transcript Type= NA
chr19	1354988	1378431	1354988	1378431	+	transcript327.chr19.nic@MUM1	transcript327.chr19.nic	protein_coding	1354988,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1355020,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431	Gene ID= ENSG00000160953.15 TPM= 4.59 Transcript Type= NA
chr19	1354711	1357094	1354711	1357094	+	ENST00000592374.5@MUM1	ENST00000592374.5	protein_coding	1354711,1356324,1357009	1355020,1356449,1357094	Gene ID= ENSG00000160953.15 TPM= 1.93 Transcript Type= protein_coding
chr19	1354977	1360711	1354977	1360711	+	ENST00000591337.5@MUM1	ENST00000591337.5	protein_coding	1354977,1356324,1357009,1358394,1360136	1355135,1356449,1357094,1358464,1360711	Gene ID= ENSG00000160953.15 TPM= 1.93 Transcript Type= protein_coding
chr19	1356314	1378431	1356314	1378431	+	ENST00000591806.5@MUM1	ENST00000591806.5	protein_coding	1356314,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431	Gene ID= ENSG00000160953.15 TPM= 19.06 Transcript Type= protein_coding
chr19	1383900	1395589	1383900	1395589	+	ENST00000539480.5@NDUFS7	ENST00000539480.5	protein_coding	1383900,1387811,1388525,1388833,1390871,1391119,1393242,1394418	1383942,1387847,1388593,1388938,1391050,1391165,1393330,1395589	Gene ID= ENSG00000115286.19 TPM= 36.2 Transcript Type= protein_coding
chr19	1383904	1395581	1383904	1395581	+	ENST00000313408.11@NDUFS7	ENST00000313408.11	protein_coding	1383904,1387811,1388525,1388833,1390871,1391119,1393242	1383942,1387847,1388593,1388938,1391050,1391165,1395581	Gene ID= ENSG00000115286.19 TPM= 13.51 Transcript Type= protein_coding
chr19	1383907	1395576	1383907	1395576	+	ENST00000534853.5@NDUFS7	ENST00000534853.5	protein_coding	1383907,1387811,1388525,1388833,1390871,1391119,1393242,1395391	1383937,1387847,1388593,1388938,1391050,1391165,1393330,1395576	Gene ID= ENSG00000115286.19 TPM= 26.06 Transcript Type= nonsense_mediated_decay
chr19	1383918	1395584	1383918	1395584	+	ENST00000546172.7@NDUFS7	ENST00000546172.7	protein_coding	1383918,1386518,1387811,1388525,1388833,1390871,1391119,1393242,1395391	1383942,1386639,1387847,1388593,1388938,1391050,1391165,1393330,1395584	Gene ID= ENSG00000115286.19 TPM= 35.21 Transcript Type= nonsense_mediated_decay
chr19	1397026	1401553	1397026	1401553	-	ENST00000252288.7@GAMT	ENST00000252288.7	protein_coding	1401296,1399793,1399524,1399128,1398916,1397026	1401553,1399938,1399587,1399195,1399026,1397499	Gene ID= ENSG00000130005.12 TPM= 16.09 Transcript Type= protein_coding
chr19	1397811	1401570	1397811	1401570	-	ENST00000447102.8@GAMT	ENST00000447102.8	protein_coding	1401296,1399793,1399524,1399128,1397811	1401570,1399938,1399587,1399195,1399026	Gene ID= ENSG00000130005.12 TPM= 1.61 Transcript Type= protein_coding
chr19	1407620	1423710	1407620	1423710	+	transcript351.chr19.nnic@DAZAP1	transcript351.chr19.nnic	protein_coding	1407620,1417500,1418204,1418666,1421148,1422348,1423420	1407802,1417540,1418370,1418731,1421258,1422396,1423710	Gene ID= ENSG00000071626.16 TPM= 4.83 Transcript Type= NA
chr19	1407680	1435683	1407680	1435683	+	ENST00000587079.5@DAZAP1	ENST00000587079.5	protein_coding	1407680,1417500,1418204,1418666,1421151,1422348,1425878,1428842,1429967,1430222,1432514,1434737	1407802,1417540,1418370,1418731,1421258,1422396,1425960,1428995,1429996,1430362,1432690,1435683	Gene ID= ENSG00000071626.16 TPM= 18.34 Transcript Type= protein_coding
chr19	1438358	1440494	1438358	1440494	+	ENST00000233609.8@RPS15	ENST00000233609.8	protein_coding	1438358,1438811,1440019,1440349	1438428,1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 771.77 Transcript Type= protein_coding
chr19	1438386	1440494	1438386	1440494	+	ENST00000592588.6@RPS15	ENST00000592588.6	protein_coding	1438386,1438807,1440019,1440349	1438428,1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 775.63 Transcript Type= protein_coding
chr19	1438405	1440488	1438405	1440488	+	ENST00000589656.6@RPS15	ENST00000589656.6	protein_coding	1438405,1438807,1440019,1440349	1438428,1438892,1440241,1440488	Gene ID= ENSG00000115268.9 TPM= 1.93 Transcript Type= protein_coding
chr19	1438420	1440494	1438420	1440494	+	ENST00000592700.2@RPS15	ENST00000592700.2	protein_coding	1438420,1438807,1440349	1438428,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 1.45 Transcript Type= retained_intron
chr19	1438401	1440494	1438401	1440494	+	ENST00000592623.5@RPS15	ENST00000592623.5	protein_coding	1438401,1440019,1440349	1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 4.34 Transcript Type= protein_coding
chr19	1457671	1461733	1457671	1461733	-	transcript375.chr19.nnic@NA	transcript375.chr19.nnic	NA	1457671	1461733	Gene ID= novel_gene_chr19_376 TPM= 3.86 Transcript Type= NA
chr19	1473948	1479556	1473948	1479556	-	ENST00000585675.5@C19orf25	ENST00000585675.5	protein_coding	1479163,1478774,1473948	1479556,1478905,1475258	Gene ID= ENSG00000119559.15 TPM= 19.31 Transcript Type= protein_coding
chr19	1474168	1479181	1474168	1479181	-	ENST00000586564.5@C19orf25	ENST00000586564.5	protein_coding	1479140,1478774,1474168	1479181,1478905,1475258	Gene ID= ENSG00000119559.15 TPM= 23.17 Transcript Type= protein_coding
chr19	1474174	1479183	1474174	1479183	-	ENST00000592872.5@C19orf25	ENST00000592872.5	protein_coding	1479114,1478774,1474174	1479183,1478905,1475258	Gene ID= ENSG00000119559.15 TPM= 2.9 Transcript Type= protein_coding
chr19	1505018	1513250	1505018	1513250	-	transcript384.chr19.nic@ADAMTSL5	transcript384.chr19.nic	protein_coding	1512963,1511625,1510845,1510639,1510368,1510150,1508443,1507998,1507557,1507242,1506739,1506590,1505018	1513250,1511727,1510917,1510730,1510428,1510258,1508570,1508109,1507643,1507405,1506928,1506661,1506316	Gene ID= ENSG00000185761.10 TPM= 4.83 Transcript Type= NA
chr19	1505018	1513251	1505018	1513251	-	transcript389.chr19.nic@ADAMTSL5	transcript389.chr19.nic	protein_coding	1512963,1510845,1510639,1510368,1510150,1508443,1507998,1507557,1507242,1506739,1506590,1505018	1513251,1510917,1510730,1510428,1510258,1508570,1508109,1507643,1507405,1506928,1506661,1506316	Gene ID= ENSG00000185761.10 TPM= 4.83 Transcript Type= NA
chr19	1576678	1592904	1576678	1592904	-	transcript408.chr19.nic@MBD3	transcript408.chr19.nic	protein_coding	1592618,1585055,1584540,1583253,1582622,1581092,1578335,1576678	1592904,1585214,1584677,1583380,1582712,1581269,1578538,1578158	Gene ID= ENSG00000071655.17 TPM= 13.03 Transcript Type= NA
chr19	1576640	1592904	1576640	1592904	-	transcript413.chr19.nic@MBD3	transcript413.chr19.nic	protein_coding	1592618,1585055,1584540,1582622,1581092,1576640	1592904,1585214,1584677,1582712,1581269,1578538	Gene ID= ENSG00000071655.17 TPM= 9.17 Transcript Type= NA
chr19	1576640	1585307	1576640	1585307	-	ENST00000592012.5@MBD3	ENST00000592012.5	protein_coding	1585055,1584540,1582622,1581092,1578335,1576640	1585307,1584677,1582712,1581269,1578534,1578158	Gene ID= ENSG00000071655.17 TPM= 7.24 Transcript Type= nonsense_mediated_decay
chr19	1589526	1590304	1589526	1590304	+	transcript422.chr19.nnic@NA	transcript422.chr19.nnic	NA	1589526	1590304	Gene ID= novel_gene_chr19_423 TPM= 1.93 Transcript Type= NA
chr19	1597172	1605490	1597172	1605490	-	ENST00000591899.7@UQCR11	ENST00000591899.7	protein_coding	1605360,1599412,1597172	1605490,1599560,1598215	Gene ID= ENSG00000127540.11 TPM= 57.44 Transcript Type= protein_coding
chr19	1598049	1605443	1598049	1605443	-	ENST00000593029.1@UQCR11	ENST00000593029.1	protein_coding	1605360,1602294,1599412,1598049	1605443,1602426,1599560,1598215	Gene ID= ENSG00000127540.11 TPM= 9.17 Transcript Type= processed_transcript
chr19	1815246	1820350	1815246	1820350	-	transcript431.chr19.nnic@REXO1	transcript431.chr19.nnic	protein_coding	1820264,1819934,1819018,1818706,1818482,1817700,1817219,1816696,1816431,1816225,1815246	1820350,1820180,1819131,1818845,1818597,1817780,1817328,1816813,1816569,1816347,1816154	Gene ID= ENSG00000079313.13 TPM= 3.86 Transcript Type= NA
chr19	1827648	1848483	1827648	1848483	-	transcript432.chr19.nic@REXO1	transcript432.chr19.nic	protein_coding	1848202,1827648	1848483,1828631	Gene ID= ENSG00000079313.13 TPM= 4.83 Transcript Type= NA
chr19	1815246	1848463	1815246	1848463	-	ENST00000170168.8@REXO1	ENST00000170168.8	protein_coding	1848202,1826878,1825839,1823572,1821519,1820264,1819934,1819018,1818706,1818482,1817707,1817219,1816698,1816431,1816225,1815246	1848463,1828631,1825943,1823785,1821682,1820395,1820057,1819131,1818843,1818595,1817780,1817329,1816813,1816569,1816345,1816154	Gene ID= ENSG00000079313.13 TPM= 37.65 Transcript Type= protein_coding
chr19	1874871	1876169	1874871	1876169	-	ENST00000565797.2@AC012615.1	ENST00000565797.2	lincRNA	1874871	1876169	Gene ID= ENSG00000261526.2 TPM= 6.76 Transcript Type= lincRNA
chr19	1876810	1885547	1876810	1885547	-	ENST00000292577.11@ABHD17A	ENST00000292577.11	protein_coding	1885352,1881235,1879921,1877508,1876810	1885547,1881804,1880115,1877687,1877425	Gene ID= ENSG00000129968.15 TPM= 90.26 Transcript Type= protein_coding
chr19	1876976	1885499	1876976	1885499	-	transcript440.chr19.nnic@ABHD17A	transcript440.chr19.nnic	protein_coding	1885352,1879921,1877508,1876976	1885499,1880115,1877687,1877425	Gene ID= ENSG00000129968.15 TPM= 4.34 Transcript Type= NA
chr19	1876976	1885473	1876976	1885473	-	transcript441.chr19.nic@ABHD17A	transcript441.chr19.nic	protein_coding	1885352,1881235,1877508,1876976	1885473,1881804,1880115,1877425	Gene ID= ENSG00000129968.15 TPM= 15.44 Transcript Type= NA
chr19	1876976	1885433	1876976	1885433	-	ENST00000250974.9@ABHD17A	ENST00000250974.9	protein_coding	1885352,1881235,1880896,1879921,1877508,1876976	1885433,1881804,1881048,1880115,1877687,1877425	Gene ID= ENSG00000129968.15 TPM= 8.21 Transcript Type= protein_coding
chr19	1905214	1926011	1905214	1926011	+	ENST00000316097.12@SCAMP4	ENST00000316097.12	protein_coding	1905214,1914979,1917694,1918127,1918889,1923070,1924108	1905439,1915026,1917822,1918283,1918990,1923187,1926011	Gene ID= ENSG00000227500.9 TPM= 16.41 Transcript Type= protein_coding
chr19	1905378	1913447	1905378	1913447	+	ENST00000329478.3@ADAT3	ENST00000329478.3	protein_coding	1905378,1911890	1905439,1913447	Gene ID= ENSG00000213638.5 TPM= 3.86 Transcript Type= protein_coding
chr19	1941122	1981338	1941122	1981338	+	transcript448.chr19.nic@CSNK1G2	transcript448.chr19.nic	protein_coding	1941122,1969508,1978305,1978442,1978602,1978859,1979319,1979495,1979752,1979911,1980149	1941418,1969959,1978345,1978511,1978750,1979248,1979403,1979643,1979835,1980017,1981338	Gene ID= ENSG00000133275.15 TPM= 3.38 Transcript Type= NA
chr19	1941149	1981338	1941149	1981338	+	ENST00000255641.12@CSNK1G2	ENST00000255641.12	protein_coding	1941149,1969508,1978305,1978442,1978602,1978859,1979163,1979319,1979495,1979752,1979911,1980149	1941418,1969959,1978345,1978511,1978750,1979093,1979248,1979403,1979643,1979835,1980017,1981338	Gene ID= ENSG00000133275.15 TPM= 57.44 Transcript Type= protein_coding
chr19	1985438	2015706	1985438	2015706	-	transcript457.chr19.nnic@BTBD2	transcript457.chr19.nnic	protein_coding	2015297,2013547,1997344,1993020,1990717,1990004,1987500,1987166,1986830,1985438	2015706,2013718,1997463,1993176,1990822,1990201,1987692,1987253,1986976,1986649	Gene ID= ENSG00000133243.8 TPM= 17.06 Transcript Type= NA
chr19	1985438	2015728	1985438	2015728	-	transcript460.chr19.nnic@BTBD2	transcript460.chr19.nnic	protein_coding	2015362,1997344,1993020,1990717,1990004,1987500,1987166,1986830,1985438	2015728,1997463,1993176,1990822,1990201,1987692,1987253,1986976,1986649	Gene ID= ENSG00000133243.8 TPM= 17.06 Transcript Type= NA
chr19	1985438	2015724	1985438	2015724	-	ENST00000255608.8@BTBD2	ENST00000255608.8	protein_coding	2015297,1997344,1993020,1990717,1990004,1987500,1987166,1986830,1985438	2015724,1997463,1993176,1990822,1990201,1987692,1987253,1986976,1986649	Gene ID= ENSG00000133243.8 TPM= 122.28 Transcript Type= protein_coding
chr19	2011864	2013763	2011864	2013763	-	transcript465.chr19.nnic@NA	transcript465.chr19.nnic	NA	2011864	2013763	Gene ID= novel_gene_chr19_466 TPM= 1.93 Transcript Type= NA
chr19	2037465	2050887	2037465	2050887	-	ENST00000591601.5@MKNK2	ENST00000591601.5	protein_coding	2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465	2050887,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2039856	Gene ID= ENSG00000099875.14 TPM= 1373.67 Transcript Type= protein_coding
chr19	2037465	2051224	2037465	2051224	-	ENST00000309340.11@MKNK2	ENST00000309340.11	protein_coding	2051096,2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465	2051224,2050947,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2037829	Gene ID= ENSG00000099875.14 TPM= 254.55 Transcript Type= protein_coding
chr19	2037482	2051244	2037482	2051244	-	ENST00000250896.7@MKNK2	ENST00000250896.7	protein_coding	2051096,2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037482	2051244,2050947,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2039856	Gene ID= ENSG00000099875.14 TPM= 955.2 Transcript Type= protein_coding
chr19	2040174	2044002	2040174	2044002	+	transcript490.chr19.nnic@NA	transcript490.chr19.nnic	NA	2040174	2044002	Gene ID= novel_gene_chr19_491 TPM= 152.52 Transcript Type= NA
chr19	2059248	2061219	2059248	2061219	-	transcript494.chr19.nnic@NA	transcript494.chr19.nnic	NA	2059248	2061219	Gene ID= novel_gene_chr19_495 TPM= 1.93 Transcript Type= NA
chr19	2064524	2066208	2064524	2066208	+	transcript496.chr19.nnic@NA	transcript496.chr19.nnic	NA	2064524	2066208	Gene ID= novel_gene_chr19_497 TPM= 5.79 Transcript Type= NA
chr19	2071038	2096332	2071038	2096332	-	ENST00000357066.7@MOB3A	ENST00000357066.7	protein_coding	2096226,2085175,2078140,2076811,2071038	2096332,2085328,2078679,2077013,2073424	Gene ID= ENSG00000172081.13 TPM= 24.13 Transcript Type= protein_coding
chr19	2100994	2151599	2100994	2151599	-	transcript500.chr19.nnic@AP3D1	transcript500.chr19.nnic	protein_coding	2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2113336,2112860,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100994	2151599,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2113413,2112931,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268	Gene ID= ENSG00000065000.15 TPM= 34.92 Transcript Type= NA
chr19	2114196	2151566	2114196	2151566	-	transcript503.chr19.nnic@AP3D1	transcript503.chr19.nnic	protein_coding	2151239,2138619,2137727,2137011,2132471,2130394,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114196	2151566,2138714,2137807,2137091,2132578,2130511,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302	Gene ID= ENSG00000065000.15 TPM= 16.12 Transcript Type= NA
chr19	2100988	2151557	2100988	2151557	-	ENST00000345016.9@AP3D1	ENST00000345016.9	protein_coding	2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100988	2151557,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268	Gene ID= ENSG00000065000.15 TPM= 31.71 Transcript Type= protein_coding
chr19	2100994	2151541	2100994	2151541	-	ENST00000355272.10@AP3D1	ENST00000355272.10	protein_coding	2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2113336,2112860,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100994	2151541,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2113413,2112967,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268	Gene ID= ENSG00000065000.15 TPM= 44.26 Transcript Type= protein_coding
chr19	2162721	2162886	2162721	2162886	-	transcript515.chr19.nnic@NA	transcript515.chr19.nnic	NA	2162721	2162886	Gene ID= novel_gene_chr19_516 TPM= 1.93 Transcript Type= NA
chr19	2233153	2236314	2233153	2236314	-	transcript520.chr19.nnic@PLEKHJ1	transcript520.chr19.nnic	protein_coding	2236155,2235923,2235762,2234150,2233998,2233153	2236314,2235933,2235828,2234240,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 14.48 Transcript Type= NA
chr19	2233153	2237704	2233153	2237704	-	ENST00000589097.5@PLEKHJ1	ENST00000589097.5	protein_coding	2237295,2236155,2235923,2235762,2234150,2233998,2233153	2237704,2236952,2235990,2235828,2234240,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 128.39 Transcript Type= protein_coding
chr19	2233149	2236326	2233149	2236326	-	ENST00000587962.6@PLEKHJ1	ENST00000587962.6	protein_coding	2236155,2235923,2235762,2234150,2233149	2236326,2235990,2235828,2234240,2234061	Gene ID= ENSG00000104886.11 TPM= 1.93 Transcript Type= protein_coding
chr19	2233153	2236294	2233153	2236294	-	ENST00000591099.6@PLEKHJ1	ENST00000591099.6	protein_coding	2236155,2235923,2235762,2233998,2233153	2236294,2235990,2235828,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 13.51 Transcript Type= protein_coding
chr19	2233156	2236320	2233156	2236320	-	ENST00000326631.6@PLEKHJ1	ENST00000326631.6	protein_coding	2236155,2235923,2235762,2234150,2233998,2233156	2236320,2235990,2235828,2234240,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 36.68 Transcript Type= protein_coding
chr19	2236809	2252073	2236809	2252073	+	transcript529.chr19.nnic@SF3A2	transcript529.chr19.nnic	protein_coding	2236809,2243382,2244544,2244733,2245446,2246753,2246882,2247594,2247767,2250337,2250652,2250849,2251099	2236901,2243544,2244615,2244779,2245555,2246802,2247022,2247662,2247869,2250479,2250760,2251008,2252073	Gene ID= ENSG00000104897.9 TPM= 9.65 Transcript Type= NA
chr19	2236504	2248679	2236504	2248679	+	ENST00000221494.9@SF3A2	ENST00000221494.9	protein_coding	2236504,2243382,2244544,2244733,2245446,2246753,2246882,2247594,2247767	2236901,2243544,2244615,2244779,2245555,2246802,2247022,2247662,2248679	Gene ID= ENSG00000104897.9 TPM= 24.13 Transcript Type= protein_coding
chr19	2252252	2256417	2252252	2256417	-	ENST00000300961.10@JSRP1	ENST00000300961.10	protein_coding	2256383,2255206,2254445,2254187,2253620,2252912,2252252	2256417,2255344,2254482,2254301,2253793,2253003,2252796	Gene ID= ENSG00000167476.10 TPM= 222.16 Transcript Type= protein_coding
chr19	2252074	2256461	2252074	2256461	-	transcript551.chr19.nnic@JSRP1	transcript551.chr19.nnic	protein_coding	2256383,2255206,2254445,2253620,2252912,2252074	2256461,2255344,2254482,2253793,2253003,2252796	Gene ID= ENSG00000167476.10 TPM= 13.17 Transcript Type= NA
chr19	2252253	2256461	2252253	2256461	-	transcript558.chr19.nnic@JSRP1	transcript558.chr19.nnic	protein_coding	2256383,2255206,2254445,2254187,2253620,2252253	2256461,2255344,2254482,2254301,2253793,2252796	Gene ID= ENSG00000167476.10 TPM= 9.79 Transcript Type= NA
chr19	2269509	2273488	2269509	2273488	+	ENST00000590943.6@OAZ1	ENST00000590943.6	protein_coding	2269509,2271782,2272735,2272972	2269744,2271954,2272820,2273488	Gene ID= ENSG00000104904.12 TPM= 17.38 Transcript Type= nonsense_mediated_decay
chr19	2269534	2273331	2269534	2273331	+	ENST00000582888.8@OAZ1	ENST00000582888.8	protein_coding	2269534,2271391,2271444,2271782,2272735,2272972	2269744,2271442,2271530,2271954,2272820,2273331	Gene ID= ENSG00000104904.12 TPM= 334.96 Transcript Type= protein_coding
chr19	2269520	2273221	2269520	2273221	+	ENST00000581150.6@OAZ1	ENST00000581150.6	protein_coding	2269520,2271385,2272735,2272972	2269744,2271954,2272820,2273221	Gene ID= ENSG00000104904.12 TPM= 1.93 Transcript Type= retained_intron
chr19	2321517	2328620	2321517	2328620	-	ENST00000252622.14@LSM7	ENST00000252622.14	protein_coding	2328561,2328387,2324125,2321517	2328620,2328477,2324196,2321822	Gene ID= ENSG00000130332.14 TPM= 20.44 Transcript Type= protein_coding
chr19	2321520	2328586	2321520	2328586	-	ENST00000587502.2@LSM7	ENST00000587502.2	protein_coding	2328387,2324125,2321520	2328586,2324196,2321822	Gene ID= ENSG00000130332.14 TPM= 10.78 Transcript Type= protein_coding
chr19	2321521	2328611	2321521	2328611	-	ENST00000585409.2@LSM7	ENST00000585409.2	protein_coding	2328561,2328387,2324125,2321521	2328611,2328477,2324192,2321822	Gene ID= ENSG00000130332.14 TPM= 4.51 Transcript Type= protein_coding
chr19	2328693	2353933	2328693	2353933	+	ENST00000610743.4@SPPL2B	ENST00000610743.4	protein_coding	2328693,2334602,2337443,2338752,2339069,2339824,2340076,2340898,2343211,2343965,2344362,2344553,2345253,2351434,2352946	2328775,2334721,2337625,2338841,2339208,2339966,2340172,2341014,2343292,2344039,2344424,2344652,2345330,2351657,2353933	Gene ID= ENSG00000005206.16 TPM= 11.58 Transcript Type= protein_coding
chr19	2328696	2342503	2328696	2342503	+	ENST00000618220.4@SPPL2B	ENST00000618220.4	protein_coding	2328696,2334602,2337443,2338752,2339069,2339824,2340076,2340898	2328775,2334721,2337625,2338841,2339208,2339966,2340172,2342503	Gene ID= ENSG00000005206.16 TPM= 2.9 Transcript Type= protein_coding
chr19	2351705	2354802	2351705	2354802	+	transcript610.chr19.nnic@NA	transcript610.chr19.nnic	NA	2351705	2354802	Gene ID= novel_gene_chr19_611 TPM= 15.44 Transcript Type= NA
chr19	2425624	2427894	2425624	2427894	-	ENST00000215570.7@TIMM13	ENST00000215570.7	protein_coding	2427414,2427256,2425624	2427894,2427324,2427046	Gene ID= ENSG00000099800.7 TPM= 25.1 Transcript Type= protein_coding
chr19	2428166	2456996	2428166	2456996	-	ENST00000325327.3@LMNB2	ENST00000325327.3	protein_coding	2456670,2444404,2438375,2438163,2435001,2434788,2434295,2433826,2432416,2431783,2431548,2428166	2456996,2444540,2438531,2438288,2435171,2434913,2434515,2434105,2432523,2431902,2431658,2430952	Gene ID= ENSG00000176619.12 TPM= 22.2 Transcript Type= protein_coding
chr19	2476127	2478259	2476127	2478259	+	ENST00000215631.8@GADD45B	ENST00000215631.8	protein_coding	2476127,2476529,2477029,2477488	2476402,2476630,2477251,2478259	Gene ID= ENSG00000099860.8 TPM= 26.06 Transcript Type= protein_coding
chr19	2714567	2721418	2714567	2721418	-	ENST00000323469.4@DIRAS1	ENST00000323469.4	protein_coding	2721304,2714567	2721418,2717875	Gene ID= ENSG00000176490.4 TPM= 2.9 Transcript Type= protein_coding
chr19	2732524	2740152	2732524	2740152	-	ENST00000269740.8@SLC39A3	ENST00000269740.8	protein_coding	2739945,2737048,2732524	2740152,2737379,2733485	Gene ID= ENSG00000141873.10 TPM= 58.88 Transcript Type= protein_coding
chr19	2754714	2783371	2754714	2783371	-	ENST00000221566.6@SGTA	ENST00000221566.6	protein_coding	2783233,2768969,2767580,2767136,2765186,2763653,2762506,2761460,2759257,2757693,2757337,2754714	2783371,2769091,2767686,2767220,2765285,2763757,2762644,2761522,2759294,2757782,2757457,2755933	Gene ID= ENSG00000104969.9 TPM= 271.25 Transcript Type= protein_coding
chr19	2785460	2815807	2785460	2815807	+	ENST00000307741.10@THOP1	ENST00000307741.10	protein_coding	2785460,2790421,2794764,2796081,2799689,2805016,2806917,2807442,2808243,2810304,2810640,2811598,2813115	2785678,2790633,2794912,2796188,2799791,2805176,2807052,2807808,2808444,2810490,2810768,2811734,2815807	Gene ID= ENSG00000172009.14 TPM= 114.87 Transcript Type= protein_coding
chr19	2785470	2813599	2785470	2813599	+	transcript644.chr19.nic@THOP1	transcript644.chr19.nic	protein_coding	2785470,2790421,2794764,2796081,2799689,2805016,2806917,2807442,2808243,2810304,2810640,2811634,2813115	2785678,2790633,2794912,2796188,2799791,2805176,2807052,2807808,2808444,2810490,2810768,2811734,2813599	Gene ID= ENSG00000172009.14 TPM= 4.83 Transcript Type= NA
chr19	2785498	2813599	2785498	2813599	+	transcript645.chr19.nnic@THOP1	transcript645.chr19.nnic	protein_coding	2785498,2790133,2794764,2796081,2799689,2805016,2806917,2807442,2808243,2810304,2810640,2811598,2813115	2785678,2790633,2794912,2796188,2799791,2805176,2807052,2807808,2808444,2810490,2810768,2811734,2813599	Gene ID= ENSG00000172009.14 TPM= 10.62 Transcript Type= NA
chr19	2785529	2813599	2785529	2813599	+	transcript647.chr19.nic@THOP1	transcript647.chr19.nic	protein_coding	2785529,2790421,2794764,2796081,2799689,2805016,2806917,2807442,2810304,2810640,2811598,2813115	2785678,2790633,2794912,2796188,2799791,2805176,2807052,2808444,2810490,2810768,2811734,2813599	Gene ID= ENSG00000172009.14 TPM= 4.83 Transcript Type= NA
chr19	2819874	2835773	2819874	2835773	+	ENST00000317243.9@ZNF554	ENST00000317243.9	protein_coding	2819874,2823040,2827617,2832303,2833681	2820124,2823112,2827743,2832494,2835773	Gene ID= ENSG00000172006.11 TPM= 8.69 Transcript Type= protein_coding
chr19	2841435	2860484	2841435	2860484	+	ENST00000334241.8@ZNF555	ENST00000334241.8	protein_coding	2841435,2850587,2851468,2852380	2841575,2850713,2851651,2860484	Gene ID= ENSG00000186300.11 TPM= 5.79 Transcript Type= protein_coding
chr19	2900898	2918476	2900898	2918476	+	ENST00000306908.9@ZNF57	ENST00000306908.9	protein_coding	2900898,2915522,2916078,2916924	2901048,2915648,2916249,2918476	Gene ID= ENSG00000171970.12 TPM= 3.86 Transcript Type= protein_coding
chr19	2933218	2944933	2933218	2944933	-	ENST00000314531.4@ZNF77	ENST00000314531.4	protein_coding	2944838,2939281,2936524,2933218	2944933,2939407,2936704,2934815	Gene ID= ENSG00000175691.8 TPM= 3.86 Transcript Type= protein_coding
chr19	2997639	3029279	2997639	3029279	-	transcript672.chr19.nnic@TLE2	transcript672.chr19.nnic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997639	3029279,3028803,3028382,3027873,3025082,3019773,3019463,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002473,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 8.28 Transcript Type= NA
chr19	2997639	3029342	2997639	3029342	-	transcript680.chr19.nnic@TLE2	transcript680.chr19.nnic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009578,3008869,3006420,3005721,3005437,3002353,3000647,2997639	3029342,3028803,3028382,3027873,3025082,3019773,3019463,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 17.89 Transcript Type= NA
chr19	2997639	3029342	2997639	3029342	-	transcript685.chr19.nnic@TLE2	transcript685.chr19.nnic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997639	3029342,3028803,3028382,3027873,3025082,3019773,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 19.26 Transcript Type= NA
chr19	2997638	3029167	2997638	3029167	-	ENST00000262953.10@TLE2	ENST00000262953.10	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997638	3029167,3028803,3028382,3027873,3025082,3019773,3019463,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 51.84 Transcript Type= protein_coding
chr19	3052910	3063107	3052910	3063107	-	ENST00000221561.12@AES	ENST00000221561.12	protein_coding	3062700,3061160,3057679,3056312,3055664,3054120,3052910	3063107,3061257,3057742,3056356,3055726,3054194,3054040	Gene ID= ENSG00000104964.14 TPM= 116.18 Transcript Type= protein_coding
chr19	3053162	3062557	3053162	3062557	-	ENST00000327141.8@AES	ENST00000327141.8	protein_coding	3062174,3061160,3057679,3056312,3055664,3054120,3053162	3062557,3061257,3057742,3056356,3055726,3054194,3054040	Gene ID= ENSG00000104964.14 TPM= 281.24 Transcript Type= protein_coding
chr19	3094410	3124004	3094410	3124004	+	ENST00000078429.8@GNA11	ENST00000078429.8	protein_coding	3094410,3110149,3113330,3114944,3118924,3119206,3120989	3094787,3110333,3113484,3115072,3119053,3119359,3124004	Gene ID= ENSG00000088256.8 TPM= 104.25 Transcript Type= protein_coding
chr19	3178768	3180332	3178768	3180332	+	ENST00000246115.4@S1PR4	ENST00000246115.4	protein_coding	3178768	3180332	Gene ID= ENSG00000125910.5 TPM= 1.93 Transcript Type= protein_coding
chr19	3185600	3209570	3185600	3209570	+	ENST00000246117.8@NCLN	ENST00000246117.8	protein_coding	3185600,3192470,3193284,3196183,3198817,3201523,3203756,3204005,3204573,3205939,3206152,3206262,3207198,3207391,3207629	3186214,3192660,3193428,3196277,3198897,3201626,3203844,3204144,3204751,3206026,3206190,3206425,3207251,3207469,3209570	Gene ID= ENSG00000125912.10 TPM= 40.54 Transcript Type= protein_coding
chr19	3359273	3462967	3359273	3462967	+	transcript757.chr19.nic@NFIC	transcript757.chr19.nic	protein_coding	3359273,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3462752	3359685,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3462967	Gene ID= ENSG00000141905.18 TPM= 35.17 Transcript Type= NA
chr19	3366549	3462967	3366549	3462967	+	ENST00000341919.7@NFIC	ENST00000341919.7	protein_coding	3366549,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3462752	3366666,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3462967	Gene ID= ENSG00000141905.18 TPM= 68.54 Transcript Type= protein_coding
chr19	3366583	3462900	3366583	3462900	+	ENST00000590282.5@NFIC	ENST00000590282.5	protein_coding	3366583,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3456550,3462752	3366666,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3456635,3462900	Gene ID= ENSG00000141905.18 TPM= 59.85 Transcript Type= protein_coding
chr19	3366586	3462907	3366586	3462907	+	ENST00000443272.2@NFIC	ENST00000443272.2	protein_coding	3366586,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3453763,3456550,3462752	3366666,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3453916,3456635,3462907	Gene ID= ENSG00000141905.18 TPM= 86.81 Transcript Type= protein_coding
chr19	3372851	3373699	3372851	3373699	-	transcript774.chr19.nnic@NA	transcript774.chr19.nnic	NA	3372851	3373699	Gene ID= novel_gene_chr19_775 TPM= 2.9 Transcript Type= NA
chr19	3384051	3385325	3384051	3385325	-	transcript778.chr19.nnic@NA	transcript778.chr19.nnic	NA	3384051	3385325	Gene ID= novel_gene_chr19_779 TPM= 4.83 Transcript Type= NA
chr19	3411330	3412493	3411330	3412493	-	transcript780.chr19.nnic@NA	transcript780.chr19.nnic	NA	3411330	3412493	Gene ID= novel_gene_chr19_781 TPM= 2.9 Transcript Type= NA
chr19	3443391	3446856	3443391	3446856	-	transcript782.chr19.nnic@NA	transcript782.chr19.nnic	NA	3443391	3446856	Gene ID= novel_gene_chr19_783 TPM= 2.9 Transcript Type= NA
chr19	3462813	3463676	3462813	3463676	-	transcript776.chr19.nnic@NA	transcript776.chr19.nnic	NA	3462813	3463676	Gene ID= novel_gene_chr19_777 TPM= 15.44 Transcript Type= NA
chr19	3463648	3465372	3463648	3465372	+	transcript766.chr19.nnic@NA	transcript766.chr19.nnic	NA	3463648	3465372	Gene ID= novel_gene_chr19_767 TPM= 144.8 Transcript Type= NA
chr19	3466621	3469106	3466621	3469106	+	transcript772.chr19.nnic@NA	transcript772.chr19.nnic	NA	3466621	3469106	Gene ID= novel_gene_chr19_773 TPM= 62.75 Transcript Type= NA
chr19	3490822	3500940	3490822	3500940	-	ENST00000427575.5@DOHH	ENST00000427575.5	protein_coding	3500561,3496541,3494028,3492262,3490822	3500940,3496886,3494104,3492499,3491811	Gene ID= ENSG00000129932.8 TPM= 153.48 Transcript Type= protein_coding
chr19	3506327	3536187	3506327	3536187	+	transcript788.chr19.nic@FZR1	transcript788.chr19.nic	protein_coding	3506327,3522956,3525868,3526120,3526980,3527631,3530792,3531714,3531911,3532417,3533294,3534421,3534795	3506474,3523058,3525993,3526386,3527062,3527814,3530857,3531816,3532095,3532650,3533398,3534513,3536187	Gene ID= ENSG00000105325.13 TPM= 17.38 Transcript Type= NA
chr19	3538261	3557616	3538261	3557616	-	transcript789.chr19.nic@MFSD12	transcript789.chr19.nic	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3538261	3557616,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3538756	Gene ID= ENSG00000161091.12 TPM= 4.83 Transcript Type= NA
chr19	3544199	3557201	3544199	3557201	-	transcript795.chr19.nic@MFSD12	transcript795.chr19.nic	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546074,3544809,3544199	3557201,3551194,3548267,3548030,3547547,3547364,3546168,3544939,3544732	Gene ID= ENSG00000161091.12 TPM= 4.34 Transcript Type= NA
chr19	3544199	3557573	3544199	3557573	-	ENST00000355415.6@MFSD12	ENST00000355415.6	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3544199	3557573,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3544732	Gene ID= ENSG00000161091.12 TPM= 50.68 Transcript Type= protein_coding
chr19	3572992	3579088	3572992	3579088	+	transcript806.chr19.nic@HMG20B	transcript806.chr19.nic	protein_coding	3572992,3573692,3574383,3575540,3576261,3576553,3576892,3577981,3578509	3573347,3573800,3574586,3575660,3576307,3576625,3577107,3578113,3579088	Gene ID= ENSG00000064961.18 TPM= 3.86 Transcript Type= NA
chr19	3572938	3579088	3572938	3579088	+	ENST00000333651.10@HMG20B	ENST00000333651.10	protein_coding	3572938,3573292,3573692,3574383,3575540,3576261,3576553,3576892,3577981,3578509	3572994,3573347,3573800,3574586,3575660,3576307,3576625,3577107,3578113,3579088	Gene ID= ENSG00000064961.18 TPM= 35.72 Transcript Type= protein_coding
chr19	3610647	3626815	3610647	3626815	-	ENST00000585942.5@CACTIN	ENST00000585942.5	protein_coding	3626596,3623688,3620707,3620127,3619080,3618875,3614397,3613464,3613058,3611900,3611229,3610647	3626815,3624162,3620802,3620272,3619242,3618989,3614589,3613586,3613365,3612413,3611360,3610971	Gene ID= ENSG00000105298.13 TPM= 2.25 Transcript Type= nonsense_mediated_decay
chr19	3610650	3626815	3610650	3626815	-	ENST00000248420.9@CACTIN	ENST00000248420.9	protein_coding	3626596,3623688,3620707,3620127,3619080,3618875,3614397,3613464,3613058,3611904,3610650	3626815,3624162,3620802,3620272,3619242,3618989,3614589,3613586,3613365,3612413,3610971	Gene ID= ENSG00000105298.13 TPM= 9.01 Transcript Type= protein_coding
chr19	3610641	3626815	3610641	3626815	-	ENST00000429344.6@CACTIN	ENST00000429344.6	protein_coding	3626596,3623688,3620707,3620127,3619080,3618875,3614397,3613464,3613058,3610641	3626815,3624162,3620802,3620272,3619242,3618989,3614589,3613586,3613365,3612413	Gene ID= ENSG00000105298.13 TPM= 44.72 Transcript Type= protein_coding
chr19	3630183	3700479	3630183	3700479	-	ENST00000335312.7@PIP5K1C	ENST00000335312.7	protein_coding	3700297,3667322,3664822,3661871,3660966,3656405,3653290,3651826,3648625,3647338,3645974,3644087,3643243,3642907,3641705,3638884,3633437,3630183	3700479,3667353,3664914,3662001,3661083,3656557,3653589,3652031,3648708,3647386,3646058,3644251,3643381,3642939,3641809,3639016,3633520,3633169	Gene ID= ENSG00000186111.9 TPM= 49.71 Transcript Type= protein_coding
chr19	3632876	3700465	3632876	3700465	-	ENST00000539785.5@PIP5K1C	ENST00000539785.5	protein_coding	3700297,3667322,3664822,3661871,3660966,3656405,3653290,3651826,3648625,3647338,3645974,3644087,3643243,3642907,3641705,3638884,3632876	3700465,3667353,3664914,3662001,3661083,3656557,3653589,3652031,3648708,3647386,3646058,3644251,3643381,3642939,3641809,3639016,3633169	Gene ID= ENSG00000186111.9 TPM= 2.41 Transcript Type= protein_coding
chr19	3750880	3761699	3750880	3761699	-	ENST00000316757.3@APBA3	ENST00000316757.3	protein_coding	3761536,3759689,3759561,3754195,3754019,3753765,3752820,3752508,3751434,3751189,3750880	3761699,3760301,3759600,3754340,3754105,3753926,3752990,3752720,3751553,3751329,3751097	Gene ID= ENSG00000011132.11 TPM= 30.89 Transcript Type= protein_coding
chr19	3750880	3761698	3750880	3761698	-	transcript826.chr19.nic@APBA3	transcript826.chr19.nic	protein_coding	3761536,3759561,3754195,3754019,3753765,3752820,3752508,3751434,3751189,3750880	3761698,3760301,3754340,3754105,3753926,3752990,3752720,3751553,3751329,3751097	Gene ID= ENSG00000011132.11 TPM= 10.62 Transcript Type= NA
chr19	3762664	3767565	3762664	3767565	+	ENST00000330133.4@MRPL54	ENST00000330133.4	protein_coding	3762664,3765166,3767261	3762818,3765331,3767565	Gene ID= ENSG00000183617.4 TPM= 25.1 Transcript Type= protein_coding
chr19	3924775	3926956	3924775	3926956	-	transcript878.chr19.nnic@NA	transcript878.chr19.nnic	NA	3924775	3926956	Gene ID= novel_gene_chr19_879 TPM= 1.93 Transcript Type= NA
chr19	3933282	3942416	3933282	3942416	+	transcript848.chr19.nic@NMRK2	transcript848.chr19.nic	protein_coding	3933282,3936575,3937240,3938603,3939900,3941071,3942083	3933697,3936665,3937288,3938759,3939971,3941177,3942416	Gene ID= ENSG00000077009.13 TPM= 127.84 Transcript Type= NA
chr19	3933590	3942416	3933590	3942416	+	transcript850.chr19.nnic@NMRK2	transcript850.chr19.nnic	protein_coding	3933590,3936575,3937240,3938603,3939900,3941071,3942083	3933697,3936665,3937288,3938806,3939971,3941177,3942416	Gene ID= ENSG00000077009.13 TPM= 7.02 Transcript Type= NA
chr19	3933589	3942416	3933589	3942416	+	transcript853.chr19.nnic@NMRK2	transcript853.chr19.nnic	protein_coding	3933589,3936575,3937240,3938603,3939900,3942083	3933697,3936665,3937288,3938759,3939971,3942416	Gene ID= ENSG00000077009.13 TPM= 9.53 Transcript Type= NA
chr19	3933472	3942416	3933472	3942416	+	transcript854.chr19.nnic@NMRK2	transcript854.chr19.nnic	protein_coding	3933472,3936575,3937240,3938603,3941071,3942083	3933697,3936665,3937288,3938759,3941177,3942416	Gene ID= ENSG00000077009.13 TPM= 8.95 Transcript Type= NA
chr19	3933589	3942416	3933589	3942416	+	transcript857.chr19.nic@NMRK2	transcript857.chr19.nic	protein_coding	3933589,3936575,3938603,3939900,3941071,3942083	3933697,3937288,3938759,3939971,3941177,3942416	Gene ID= ENSG00000077009.13 TPM= 10.2 Transcript Type= NA
chr19	3952919	3954392	3952919	3954392	-	transcript880.chr19.nnic@NA	transcript880.chr19.nnic	NA	3952919	3954392	Gene ID= novel_gene_chr19_881 TPM= 1.93 Transcript Type= NA
chr19	3954563	3955293	3954563	3955293	+	transcript876.chr19.nnic@NA	transcript876.chr19.nnic	NA	3954563	3955293	Gene ID= novel_gene_chr19_877 TPM= 1.93 Transcript Type= NA
chr19	3958454	3971155	3958454	3971155	-	transcript836.chr19.nic@DAPK3	transcript836.chr19.nic	protein_coding	3971022,3969674,3964631,3964244,3963871,3963643,3961009,3960059,3958454	3971155,3969829,3964991,3964373,3963919,3963669,3961161,3960104,3959637	Gene ID= ENSG00000167657.13 TPM= 216.88 Transcript Type= NA
chr19	3958453	3971155	3958453	3971155	-	transcript867.chr19.nnic@DAPK3	transcript867.chr19.nnic	protein_coding	3971022,3969674,3964684,3958453	3971155,3969829,3964991,3958661	Gene ID= ENSG00000167657.13 TPM= 17.86 Transcript Type= NA
chr19	3958453	3971070	3958453	3971070	-	ENST00000545797.6@DAPK3	ENST00000545797.6	protein_coding	3970921,3969674,3964631,3964244,3963871,3963643,3961009,3960059,3958453	3971070,3969829,3964991,3964373,3963919,3963669,3961161,3960104,3959637	Gene ID= ENSG00000167657.13 TPM= 30.09 Transcript Type= protein_coding
chr19	3961490	3962810	3961490	3962810	+	transcript874.chr19.nnic@NA	transcript874.chr19.nnic	NA	3961490	3962810	Gene ID= novel_gene_chr19_875 TPM= 29.92 Transcript Type= NA
chr19	3976056	3985466	3976056	3985466	-	transcript885.chr19.nnic@EEF2	transcript885.chr19.nnic	protein_coding	3985378,3984136,3983110,3982807,3982246,3981947,3981339,3980841,3980514,3979808,3979329,3977819,3977428,3977215,3976396,3976056	3985466,3984350,3983291,3983018,3982424,3982052,3981452,3980979,3980709,3980066,3979436,3978172,3977610,3977347,3976747,3976279	Gene ID= ENSG00000167658.15 TPM= 282.5 Transcript Type= NA
chr19	3976056	3985469	3976056	3985469	-	ENST00000309311.6@EEF2	ENST00000309311.6	protein_coding	3985378,3984136,3983110,3982807,3982246,3981947,3981339,3980841,3980514,3979808,3979329,3977819,3977428,3977215,3976056	3985469,3984350,3983291,3983018,3982424,3982052,3981452,3980979,3980709,3980066,3979436,3978172,3977610,3977347,3976747	Gene ID= ENSG00000167658.15 TPM= 1724.84 Transcript Type= protein_coding
chr19	3983857	3985463	3983857	3985463	-	ENST00000594885.1@EEF2	ENST00000594885.1	protein_coding	3985378,3983857	3985463,3984350	Gene ID= ENSG00000167658.15 TPM= 1.93 Transcript Type= retained_intron
chr19	4007646	4039386	4007646	4039386	+	ENST00000262971.2@PIAS4	ENST00000262971.2	protein_coding	4007646,4012923,4024036,4028146,4028510,4028720,4028931,4033100,4033420,4037374,4037616	4007787,4013349,4024120,4028187,4028600,4028848,4029036,4033173,4033580,4037504,4039386	Gene ID= ENSG00000105229.6 TPM= 44.4 Transcript Type= protein_coding
chr19	4046332	4065933	4046332	4065933	-	transcript938.chr19.nnic@ZBTB7A	transcript938.chr19.nnic	protein_coding	4065430,4053971,4047746,4046332	4065933,4055247,4048244,4046449	Gene ID= ENSG00000178951.8 TPM= 6.44 Transcript Type= NA
chr19	4047661	4065301	4047661	4065301	-	transcript946.chr19.nnic@ZBTB7A	transcript946.chr19.nnic	protein_coding	4064248,4053971,4047661	4065301,4055247,4048244	Gene ID= ENSG00000178951.8 TPM= 26.71 Transcript Type= NA
chr19	4047742	4065732	4047742	4065732	-	ENST00000601588.1@ZBTB7A	ENST00000601588.1	protein_coding	4065430,4053971,4047742	4065732,4055247,4048244	Gene ID= ENSG00000178951.8 TPM= 45.05 Transcript Type= protein_coding
chr19	4044663	4045808	4044663	4045808	-	transcript955.chr19.nnic@NA	transcript955.chr19.nnic	NA	4044663	4045808	Gene ID= novel_gene_chr19_956 TPM= 10.62 Transcript Type= NA
chr19	4045215	4046423	4045215	4046423	-	transcript959.chr19.nnic@NA	transcript959.chr19.nnic	NA	4045215	4046423	Gene ID= novel_gene_chr19_960 TPM= 2.9 Transcript Type= NA
chr19	4046344	4047786	4046344	4047786	-	transcript951.chr19.nnic@NA	transcript951.chr19.nnic	NA	4046344	4047786	Gene ID= novel_gene_chr19_952 TPM= 24.13 Transcript Type= NA
chr19	4061612	4065872	4061612	4065872	-	transcript957.chr19.nnic@NA	transcript957.chr19.nnic	NA	4061612	4065872	Gene ID= novel_gene_chr19_958 TPM= 9.65 Transcript Type= NA
chr19	4088650	4089881	4088650	4089881	-	transcript978.chr19.nnic@NA	transcript978.chr19.nnic	NA	4088650	4089881	Gene ID= novel_gene_chr19_979 TPM= 1.93 Transcript Type= NA
chr19	4090321	4124124	4090321	4124124	-	transcript964.chr19.nnic@MAP2K2	transcript964.chr19.nnic	protein_coding	4123784,4117419,4110509,4102376,4101229,4101019,4099201,4097279,4095388,4094453,4090321	4124124,4117629,4110655,4102453,4101280,4101143,4099378,4097343,4095449,4094498,4090708	Gene ID= ENSG00000126934.13 TPM= 34.2 Transcript Type= NA
chr19	4090321	4124129	4090321	4124129	-	ENST00000262948.9@MAP2K2	ENST00000262948.9	protein_coding	4123784,4117419,4110509,4102376,4101229,4101019,4099201,4097279,4095388,4094453,4090321	4124129,4117629,4110655,4102453,4101280,4101143,4099414,4097343,4095449,4094498,4090708	Gene ID= ENSG00000126934.13 TPM= 465.36 Transcript Type= protein_coding
chr19	4174109	4182604	4174109	4182604	-	ENST00000337491.6@SIRT6	ENST00000337491.6	protein_coding	4182474,4180782,4179104,4177079,4175842,4175680,4175028,4174109	4182604,4180909,4179286,4177138,4175937,4175760,4175151,4174946	Gene ID= ENSG00000077463.14 TPM= 4.83 Transcript Type= protein_coding
chr19	4247079	4269090	4247079	4269090	+	ENST00000262962.11@CCDC94	ENST00000262962.11	protein_coding	4247079,4249228,4251027,4254355,4258242,4261994,4267624,4268584	4247170,4249328,4251171,4254489,4258423,4262114,4267774,4269090	Gene ID= ENSG00000105248.15 TPM= 34.75 Transcript Type= protein_coding
chr19	4343559	4360072	4343559	4360072	+	ENST00000599840.5@MPND	ENST00000599840.5	protein_coding	4343559,4343708,4345745,4352897,4354045,4354324,4354949,4355097,4357253,4357515,4358083,4359163,4359916	4343600,4343994,4345981,4353029,4354129,4354420,4355021,4355173,4357421,4357585,4358172,4359255,4360072	Gene ID= ENSG00000008382.15 TPM= 10.62 Transcript Type= protein_coding
chr19	4343527	4360086	4343527	4360086	+	ENST00000262966.12@MPND	ENST00000262966.12	protein_coding	4343527,4343708,4345745,4352897,4354045,4354324,4354949,4355097,4357253,4357515,4359163,4359916	4343600,4343994,4345981,4353029,4354129,4354420,4355021,4355173,4357421,4357585,4359255,4360086	Gene ID= ENSG00000008382.15 TPM= 2.9 Transcript Type= protein_coding
chr19	4360370	4400547	4360370	4400547	-	ENST00000269886.7@SH3GL1	ENST00000269886.7	protein_coding	4400324,4366926,4366501,4365482,4364088,4363720,4363370,4362612,4362329,4360370	4400547,4366994,4366573,4365625,4364221,4363878,4363473,4362736,4362385,4361796	Gene ID= ENSG00000141985.9 TPM= 49.23 Transcript Type= protein_coding
chr19	4402595	4443392	4402595	4443392	+	transcript994.chr19.nnic@CHAF1A	transcript994.chr19.nnic	protein_coding	4402595,4418020,4422566,4423335,4423806,4428664,4429438,4429708,4430549,4431952,4433070,4442245,4442925	4402814,4418076,4422795,4423395,4423874,4428890,4429606,4429788,4430641,4432207,4433539,4442341,4443392	Gene ID= ENSG00000167670.15 TPM= 2.9 Transcript Type= NA
chr19	4402586	4422796	4402586	4422796	+	transcript996.chr19.nic@CHAF1A	transcript996.chr19.nic	protein_coding	4402586,4405912,4408903,4418020,4422566	4402814,4405962,4409759,4418076,4422796	Gene ID= ENSG00000167670.15 TPM= 3.86 Transcript Type= NA
chr19	4402662	4443392	4402662	4443392	+	ENST00000301280.9@CHAF1A	ENST00000301280.9	protein_coding	4402662,4405912,4408903,4418020,4422566,4423335,4423806,4428664,4429438,4429708,4430549,4431952,4433070,4442245,4442925	4402814,4405962,4409759,4418076,4422795,4423395,4423874,4428890,4429606,4429788,4430641,4432207,4433539,4442341,4443392	Gene ID= ENSG00000167670.15 TPM= 4.83 Transcript Type= protein_coding
chr19	4445010	4455053	4445010	4455053	-	transcript998.chr19.nnic@UBXN6	transcript998.chr19.nnic	protein_coding	4454822,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446283,4446049,4445010	4455053,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4446197,4445623	Gene ID= ENSG00000167671.11 TPM= 15.32 Transcript Type= NA
chr19	4445006	4457822	4445006	4457822	-	ENST00000301281.10@UBXN6	ENST00000301281.10	protein_coding	4457615,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446283,4446049,4445006	4457822,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4446197,4445623	Gene ID= ENSG00000167671.11 TPM= 63.83 Transcript Type= protein_coding
chr19	4445010	4455328	4445010	4455328	-	transcript1005.chr19.nic@UBXN6	transcript1005.chr19.nic	protein_coding	4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446283,4446049,4445010	4455328,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4446197,4445623	Gene ID= ENSG00000167671.11 TPM= 10.25 Transcript Type= NA
chr19	4445476	4457823	4445476	4457823	-	transcript1006.chr19.nic@UBXN6	transcript1006.chr19.nic	protein_coding	4457615,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446049,4445476	4457823,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4445623	Gene ID= ENSG00000167671.11 TPM= 5.79 Transcript Type= NA
chr19	4445010	4449410	4445010	4449410	-	transcript1009.chr19.nnic@UBXN6	transcript1009.chr19.nnic	protein_coding	4449127,4448318,4447550,4446836,4446500,4446283,4446049,4445010	4449410,4448415,4447625,4446920,4446719,4446413,4446197,4445623	Gene ID= ENSG00000167671.11 TPM= 10.33 Transcript Type= NA
chr19	4472244	4502208	4472244	4502208	+	transcript1016.chr19.nic@HDGFL2	transcript1016.chr19.nic	protein_coding	4472244,4475275,4475445,4488676,4491566,4491764,4493703,4493982,4494166,4496302,4497958,4498306,4498814,4499491,4501191	4472422,4475351,4475583,4488876,4491682,4491835,4493862,4494057,4494475,4496405,4498031,4498376,4498915,4499704,4502208	Gene ID= ENSG00000167674.14 TPM= 22.68 Transcript Type= NA
chr19	4472306	4502207	4472306	4502207	+	ENST00000621835.4@HDGFL2	ENST00000621835.4	protein_coding	4472306,4475275,4475445,4488676,4491566,4491764,4493703,4493982,4494166,4496302,4497958,4498306,4498814,4499491,4501191,4501914	4472422,4475351,4475583,4488876,4491682,4491835,4493862,4494057,4494475,4496405,4498031,4498376,4498915,4499704,4501317,4502207	Gene ID= ENSG00000167674.14 TPM= 24.13 Transcript Type= protein_coding
chr19	4502192	4520419	4502192	4520419	-	transcript1034.chr19.nnic@PLIN4	transcript1034.chr19.nnic	protein_coding	4518438,4518222,4517554,4516617,4510446,4508768,4504861,4502192	4520419,4518289,4517698,4516678,4513704,4508955,4504947,4504785	Gene ID= ENSG00000167676.4 TPM= 87.43 Transcript Type= NA
chr19	4502192	4518465	4502192	4518465	-	ENST00000633942.1@PLIN4	ENST00000633942.1	protein_coding	4518385,4518222,4517554,4516617,4510446,4508768,4504861,4502192	4518465,4518289,4517698,4516678,4513704,4508955,4504947,4504785	Gene ID= ENSG00000167676.4 TPM= 209.06 Transcript Type= protein_coding
chr19	4503313	4508324	4503313	4508324	+	transcript1062.chr19.nnic@NA	transcript1062.chr19.nnic	NA	4503313	4508324	Gene ID= novel_gene_chr19_1063 TPM= 2.9 Transcript Type= NA
chr19	4522531	4535224	4522531	4535224	-	ENST00000381848.7@PLIN5	ENST00000381848.7	protein_coding	4535165,4534015,4531627,4529784,4529073,4525633,4524963,4522531	4535224,4534095,4531822,4529866,4529253,4525832,4525076,4524085	Gene ID= ENSG00000214456.8 TPM= 198.85 Transcript Type= protein_coding
chr19	4528237	4528522	4528237	4528522	+	transcript1103.chr19.nnic@NA	transcript1103.chr19.nnic	NA	4528237	4528522	Gene ID= novel_gene_chr19_1104 TPM= 2.9 Transcript Type= NA
chr19	4657545	4670370	4657545	4670370	-	ENST00000262947.7@MYDGF	ENST00000262947.7	protein_coding	4670161,4668595,4664876,4660669,4659931,4657545	4670370,4668645,4664937,4660750,4660003,4658084	Gene ID= ENSG00000074842.7 TPM= 86.88 Transcript Type= protein_coding
chr19	4675340	4723835	4675340	4723835	-	transcript1105.chr19.nic@DPP9	transcript1105.chr19.nic	protein_coding	4723674,4722499,4722195,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694661,4690878,4689570,4688757,4685626,4684663,4683477,4683190,4682696,4679835,4675340	4723835,4722551,4722304,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823,4690957,4689722,4688892,4685771,4684809,4683629,4683324,4682838,4679946,4676656	Gene ID= ENSG00000142002.16 TPM= 4.9 Transcript Type= NA
chr19	4675226	4723863	4675226	4723863	-	ENST00000262960.13@DPP9	ENST00000262960.13	protein_coding	4723674,4722499,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694661,4690878,4689570,4688757,4685626,4684663,4683477,4682696,4679835,4675226	4723863,4722551,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823,4690957,4689722,4688892,4685771,4684809,4683629,4682838,4679946,4676656	Gene ID= ENSG00000142002.16 TPM= 73.92 Transcript Type= protein_coding
chr19	4694317	4723750	4694317	4723750	-	ENST00000597849.5@DPP9	ENST00000597849.5	protein_coding	4723674,4722499,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694317	4723750,4722551,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823	Gene ID= ENSG00000142002.16 TPM= 6.27 Transcript Type= protein_coding
chr19	4709444	4711797	4709444	4711797	+	transcript1133.chr19.nnic@NA	transcript1133.chr19.nnic	NA	4709444	4711797	Gene ID= novel_gene_chr19_1134 TPM= 29.92 Transcript Type= NA
chr19	4791681	4801273	4791681	4801273	+	ENST00000269856.4@FEM1A	ENST00000269856.4	protein_coding	4791681	4801273	Gene ID= ENSG00000141965.4 TPM= 270.29 Transcript Type= protein_coding
chr19	4796190	4798431	4796190	4798431	-	transcript1140.chr19.nnic@NA	transcript1140.chr19.nnic	NA	4798374,4797737,4796190	4798431,4798279,4796402	Gene ID= novel_gene_chr19_1141 TPM= 1.93 Transcript Type= NA
chr19	4815932	4831704	4815932	4831704	-	ENST00000248244.5@TICAM1	ENST00000248244.5	protein_coding	4831614,4815932	4831704,4818516	Gene ID= ENSG00000127666.9 TPM= 29.92 Transcript Type= protein_coding
chr19	4838341	4867768	4838341	4867768	-	ENST00000221957.8@PLIN3	ENST00000221957.8	protein_coding	4867609,4861329,4859826,4859590,4852016,4847691,4844668,4838341	4867768,4861411,4860024,4859672,4852301,4847890,4844793,4839536	Gene ID= ENSG00000105355.8 TPM= 258.54 Transcript Type= protein_coding
chr19	4969121	5153595	4969121	5153595	+	ENST00000159111.8@KDM4B	ENST00000159111.8	protein_coding	4969121,5016257,5032866,5039836,5041137,5047476,5071010,5077367,5082367,5110622,5119653,5131076,5131887,5133883,5135339,5137262,5137621,5137962,5143967,5144248,5144783,5150358,5151335	4969230,5016339,5033031,5040011,5041251,5047669,5071059,5077470,5082504,5110818,5119852,5131545,5132007,5134061,5135561,5137338,5137676,5138070,5144152,5144412,5144902,5150450,5153595	Gene ID= ENSG00000127663.14 TPM= 30.41 Transcript Type= protein_coding
chr19	4969113	5153595	4969113	5153595	+	ENST00000611640.4@KDM4B	ENST00000611640.4	protein_coding	4969113,5016257,5032866,5039836,5041137,5047476,5071010,5077367,5082367,5110622,5119118,5119653,5131076,5131887,5133883,5135339,5137262,5137621,5137962,5143967,5144248,5144783,5150358,5151335	4969230,5016339,5033031,5040011,5041251,5047669,5071059,5077470,5082504,5110818,5119219,5119852,5131545,5132007,5134061,5135561,5137338,5137676,5138070,5144152,5144412,5144902,5150450,5153595	Gene ID= ENSG00000127663.14 TPM= 27.51 Transcript Type= protein_coding
chr19	5586999	5622980	5586999	5622980	-	ENST00000252542.8@SAFB2	ENST00000252542.8	protein_coding	5622530,5621309,5616422,5616132,5613465,5612540,5611120,5610639,5609995,5604787,5604583,5600130,5598793,5595361,5593891,5592747,5591748,5590278,5587868,5587701,5586999	5622980,5621396,5616486,5616335,5613527,5612567,5611630,5610688,5610095,5604936,5604695,5600260,5598884,5595497,5594178,5592887,5591793,5590408,5587980,5587767,5587399	Gene ID= ENSG00000130254.11 TPM= 11.58 Transcript Type= protein_coding
chr19	5604583	5622868	5604583	5622868	-	transcript1217.chr19.nic@SAFB2	transcript1217.chr19.nic	protein_coding	5622530,5621309,5616422,5616132,5613465,5611120,5610639,5609995,5604787,5604583	5622868,5621396,5616486,5616335,5613527,5612567,5610688,5610095,5604936,5604695	Gene ID= ENSG00000130254.11 TPM= 3.86 Transcript Type= NA
chr19	5587057	5589789	5587057	5589789	-	transcript1220.chr19.nnic@NA	transcript1220.chr19.nnic	NA	5587057	5589789	Gene ID= novel_gene_chr19_1221 TPM= 1.93 Transcript Type= NA
chr19	5623040	5668478	5623040	5668478	+	transcript1203.chr19.nic@SAFB	transcript1203.chr19.nic	protein_coding	5623040,5626405,5641594,5641740,5645337,5648016,5649926,5650978,5653115,5653338,5654061,5654368,5657241,5661521,5664022,5664397,5667046,5667347,5667820,5668162	5623394,5626489,5641658,5641946,5645399,5648043,5649975,5651072,5653264,5653420,5654200,5654456,5657347,5661808,5664159,5664439,5667164,5667450,5667886,5668478	Gene ID= ENSG00000160633.12 TPM= 8.21 Transcript Type= NA
chr19	5623118	5668466	5623118	5668466	+	ENST00000592224.5@SAFB	ENST00000592224.5	protein_coding	5623118,5626405,5641594,5641740,5645337,5648016,5648989,5649926,5650978,5653115,5653338,5654061,5654368,5657241,5661521,5664022,5664397,5667046,5667347,5667820,5668162	5623394,5626489,5641658,5641946,5645399,5648043,5649499,5649975,5651072,5653264,5653420,5654200,5654456,5657347,5661808,5664159,5664439,5667164,5667450,5667886,5668466	Gene ID= ENSG00000160633.12 TPM= 69.26 Transcript Type= protein_coding
chr19	5678422	5680896	5678422	5680896	-	ENST00000309324.8@C19orf70	ENST00000309324.8	protein_coding	5680458,5679586,5679345,5678422	5680896,5679763,5679396,5678648	Gene ID= ENSG00000174917.8 TPM= 168.93 Transcript Type= protein_coding
chr19	5678420	5680653	5678420	5680653	-	transcript1228.chr19.nnic@C19orf70	transcript1228.chr19.nnic	protein_coding	5680458,5679617,5678420	5680653,5679763,5678636	Gene ID= ENSG00000174917.8 TPM= 5.31 Transcript Type= NA
chr19	5678422	5680252	5678422	5680252	-	ENST00000587950.5@C19orf70	ENST00000587950.5	protein_coding	5680055,5679586,5679345,5678422	5680252,5679763,5679396,5678648	Gene ID= ENSG00000174917.8 TPM= 12.07 Transcript Type= protein_coding
chr19	5681009	5688522	5681009	5688522	+	transcript1232.chr19.nic@HSD11B1L	transcript1232.chr19.nic	protein_coding	5681009,5684781,5684989,5686900,5687282,5687503,5687753	5681271,5684905,5685119,5686991,5687375,5687668,5688522	Gene ID= ENSG00000167733.13 TPM= 2.9 Transcript Type= NA
chr19	5681037	5688522	5681037	5688522	+	ENST00000579562.5@HSD11B1L	ENST00000579562.5	protein_coding	5681037,5684819,5684989,5686900,5687282,5687503,5687753	5681271,5684905,5685119,5686991,5687375,5687668,5688522	Gene ID= ENSG00000167733.13 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr19	5681064	5688522	5681064	5688522	+	ENST00000339423.6@HSD11B1L	ENST00000339423.6	protein_coding	5681064,5684819,5684989,5686416,5686900,5687282,5687503,5687753	5681271,5684905,5685119,5686527,5686991,5687375,5687668,5688522	Gene ID= ENSG00000167733.13 TPM= 1.93 Transcript Type= protein_coding
chr19	5690196	5691876	5690196	5691876	+	ENST00000347512.7@RPL36	ENST00000347512.7	protein_coding	5690196,5690506,5691319,5691532	5690327,5690600,5691453,5691876	Gene ID= ENSG00000130255.12 TPM= 376.95 Transcript Type= protein_coding
chr19	5690316	5691667	5690316	5691667	+	ENST00000394580.2@RPL36	ENST00000394580.2	protein_coding	5690316,5691319,5691532	5690600,5691453,5691667	Gene ID= ENSG00000130255.12 TPM= 58.4 Transcript Type= protein_coding
chr19	5691837	5720146	5691837	5720146	-	transcript1253.chr19.nic@LONP1	transcript1253.chr19.nic	protein_coding	5719704,5714183,5713134,5711771,5708342,5707697,5707060,5705772,5700789,5699027,5696670,5696249,5696054,5694761,5694387,5693552,5693298,5691837	5720146,5714271,5713253,5712002,5708403,5707826,5707143,5705992,5700927,5699205,5696757,5696371,5696170,5694901,5694552,5693769,5693462,5692242	Gene ID= ENSG00000196365.11 TPM= 8.49 Transcript Type= NA
chr19	5691834	5720290	5691834	5720290	-	ENST00000360614.7@LONP1	ENST00000360614.7	protein_coding	5719704,5714183,5713134,5711771,5708342,5707697,5707060,5705772,5700789,5699027,5696670,5696249,5696054,5694761,5694387,5693552,5693298,5691834	5720290,5714271,5713253,5712002,5708403,5707826,5707143,5705992,5700927,5699205,5696757,5696371,5696170,5694901,5694552,5693769,5693462,5692208	Gene ID= ENSG00000196365.11 TPM= 291.01 Transcript Type= protein_coding
chr19	5703372	5705173	5703372	5705173	+	transcript1273.chr19.nnic@NA	transcript1273.chr19.nnic	NA	5703372	5705173	Gene ID= novel_gene_chr19_1274 TPM= 1.93 Transcript Type= NA
chr19	5785140	5791238	5785140	5791238	-	ENST00000309061.11@DUS3L	ENST00000309061.11	protein_coding	5791044,5790047,5789207,5788357,5788024,5787589,5787296,5787061,5786749,5786467,5785603,5785383,5785140	5791238,5790335,5789719,5788398,5788176,5787705,5787361,5787171,5786845,5786542,5785791,5785511,5785275	Gene ID= ENSG00000141994.15 TPM= 51.64 Transcript Type= protein_coding
chr19	5785140	5791182	5785140	5791182	-	transcript1277.chr19.nic@DUS3L	transcript1277.chr19.nic	protein_coding	5791044,5790047,5789207,5788357,5788024,5787589,5787296,5787061,5786749,5786467,5785603,5785140	5791182,5790335,5789719,5788398,5788176,5787705,5787361,5787171,5786845,5786542,5785791,5785511	Gene ID= ENSG00000141994.15 TPM= 5.31 Transcript Type= NA
chr19	5894677	5903756	5894677	5903756	-	ENST00000308961.4@NDUFA11	ENST00000308961.4	protein_coding	5903612,5896905,5896453,5894677	5903756,5896997,5896575,5894854	Gene ID= ENSG00000174886.12 TPM= 259.5 Transcript Type= protein_coding
chr19	5894677	5903754	5894677	5903754	-	ENST00000593233.1@NDUFA11	ENST00000593233.1	protein_coding	5903612,5901335,5896905,5896453,5894677	5903754,5901454,5896997,5896575,5894854	Gene ID= ENSG00000174886.12 TPM= 22.04 Transcript Type= nonsense_mediated_decay
chr19	5894675	5903771	5894675	5903771	-	ENST00000592634.5@NDUFA11	ENST00000592634.5	protein_coding	5903612,5896905,5894675	5903771,5896997,5896575	Gene ID= ENSG00000174886.12 TPM= 9.65 Transcript Type= protein_coding
chr19	5906708	5907634	5906708	5907634	+	transcript1302.chr19.nnic@NA	transcript1302.chr19.nnic	NA	5906708	5907634	Gene ID= novel_gene_chr19_1303 TPM= 1.93 Transcript Type= NA
chr19	5917322	5934462	5917322	5934462	-	ENST00000586344.5@RANBP3	ENST00000586344.5	protein_coding	5933414,5932452,5931419,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5917322	5934462,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653	Gene ID= ENSG00000031823.14 TPM= 2.41 Transcript Type= retained_intron
chr19	5917352	5978086	5917352	5978086	-	ENST00000034275.12@RANBP3	ENST00000034275.12	protein_coding	5978061,5957918,5941799,5941621,5933414,5932452,5931404,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5917352	5978086,5957973,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653	Gene ID= ENSG00000031823.14 TPM= 8.69 Transcript Type= protein_coding
chr19	5917323	5978093	5917323	5978093	-	ENST00000591092.5@RANBP3	ENST00000591092.5	protein_coding	5978061,5957918,5941799,5941621,5933414,5932452,5931419,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5917323	5978093,5957973,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653	Gene ID= ENSG00000031823.14 TPM= 4.34 Transcript Type= protein_coding
chr19	6210379	6279948	6210379	6279948	-	ENST00000252674.8@MLLT1	ENST00000252674.8	protein_coding	6279773,6270579,6262228,6230570,6226977,6222121,6217954,6216405,6213939,6213726,6213337,6210379	6279948,6270759,6262310,6230713,6227102,6222684,6218041,6216513,6214038,6213797,6213408,6213170	Gene ID= ENSG00000130382.8 TPM= 111.01 Transcript Type= protein_coding
chr19	6361452	6368908	6361452	6368908	+	ENST00000245816.8@CLPP	ENST00000245816.8	protein_coding	6361452,6361869,6362446,6364452,6366258,6368538	6361772,6361940,6362542,6364639,6366363,6368908	Gene ID= ENSG00000125656.8 TPM= 96.53 Transcript Type= protein_coding
chr19	6372433	6375251	6372433	6375251	+	ENST00000245812.7@ALKBH7	ENST00000245812.7	protein_coding	6372433,6374203,6374465,6374811	6373024,6374376,6374589,6375251	Gene ID= ENSG00000125652.7 TPM= 103.29 Transcript Type= protein_coding
chr19	6379569	6393460	6379569	6393460	-	ENST00000394456.9@GTF2F1	ENST00000394456.9	protein_coding	6392984,6392857,6391902,6389444,6387389,6383311,6381697,6381554,6381359,6381122,6380904,6380573,6379569	6393460,6392903,6391974,6389637,6387559,6383495,6381850,6381615,6381478,6381195,6381042,6380690,6380485	Gene ID= ENSG00000125651.13 TPM= 52.13 Transcript Type= protein_coding
chr19	6413641	6424818	6413641	6424818	-	transcript1325.chr19.nnic@KHSRP	transcript1325.chr19.nnic	protein_coding	6424682,6424453,6422340,6421650,6421278,6420422,6420073,6419203,6418702,6418483,6417981,6417739,6416987,6416738,6416490,6416298,6415808,6415534,6415380,6415141,6413641	6424818,6424549,6422436,6421688,6421317,6420471,6420144,6419260,6418876,6418581,6418079,6417841,6417087,6416882,6416650,6416407,6415896,6415734,6415457,6415301,6414120	Gene ID= ENSG00000088247.17 TPM= 1.93 Transcript Type= NA
chr19	6413826	6424819	6413826	6424819	-	transcript1335.chr19.nnic@KHSRP	transcript1335.chr19.nnic	protein_coding	6424689,6424453,6422340,6421650,6421278,6420422,6420073,6419203,6418702,6418483,6417981,6417739,6416987,6416738,6416490,6416298,6415808,6415534,6415380,6413826	6424819,6424556,6422436,6421688,6421317,6420471,6420144,6419260,6418876,6418581,6418079,6417841,6417087,6416882,6416650,6416407,6415896,6415734,6415457,6415301	Gene ID= ENSG00000088247.17 TPM= 2.9 Transcript Type= NA
chr19	6413641	6424819	6413641	6424819	-	transcript1338.chr19.nic@KHSRP	transcript1338.chr19.nic	protein_coding	6424453,6422340,6421650,6421278,6420422,6420073,6419203,6418702,6418483,6417981,6417739,6416987,6416738,6416490,6416298,6415808,6415534,6415380,6413641	6424819,6422436,6421688,6421317,6420471,6420144,6419260,6418876,6418581,6418079,6417841,6417087,6416882,6416650,6416407,6415896,6415734,6415457,6415301	Gene ID= ENSG00000088247.17 TPM= 16.41 Transcript Type= NA
chr19	6413348	6424794	6413348	6424794	-	ENST00000398148.7@KHSRP	ENST00000398148.7	protein_coding	6424453,6422340,6421650,6421278,6420422,6420073,6419203,6418702,6418483,6417981,6417739,6416987,6416738,6416490,6416298,6415808,6415534,6415380,6415141,6413348	6424794,6422436,6421688,6421317,6420471,6420144,6419260,6418876,6418581,6418079,6417841,6417087,6416882,6416650,6416407,6415896,6415734,6415457,6415301,6414120	Gene ID= ENSG00000088247.17 TPM= 6.76 Transcript Type= protein_coding
chr19	6436081	6459833	6436081	6459833	-	transcript1347.chr19.nic@SLC25A23	transcript1347.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6438447,6436081	6459833,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6438534,6436464	Gene ID= ENSG00000125648.14 TPM= 6.76 Transcript Type= NA
chr19	6440064	6459773	6440064	6459773	-	transcript1348.chr19.nic@SLC25A23	transcript1348.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6441979,6440064	6459773,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6442159,6441484	Gene ID= ENSG00000125648.14 TPM= 4.34 Transcript Type= NA
chr19	6436079	6459833	6436079	6459833	-	transcript1352.chr19.nic@SLC25A23	transcript1352.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6436079	6459833,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6436464	Gene ID= ENSG00000125648.14 TPM= 8.69 Transcript Type= NA
chr19	6440064	6459735	6440064	6459735	-	ENST00000301454.8@SLC25A23	ENST00000301454.8	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6440064	6459735,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6442159	Gene ID= ENSG00000125648.14 TPM= 31.37 Transcript Type= protein_coding
chr19	6494319	6502584	6494319	6502584	-	ENST00000264071.6@TUBB4A	ENST00000264071.6	protein_coding	6502156,6501515,6501287,6494319	6502584,6501623,6501397,6496221	Gene ID= ENSG00000104833.11 TPM= 6.76 Transcript Type= protein_coding
chr19	6530999	6535928	6530999	6535928	+	ENST00000245817.4@TNFSF9	ENST00000245817.4	protein_coding	6530999,6532786,6534600	6531303,6532816,6535928	Gene ID= ENSG00000125657.4 TPM= 4.83 Transcript Type= protein_coding
chr19	6677704	6720682	6677704	6720682	-	ENST00000245907.10@C3	ENST00000245907.10	protein_coding	6720516,6719211,6718247,6718094,6714352,6714166,6713992,6713407,6713189,6712508,6712257,6710987,6710639,6709684,6707800,6707466,6707076,6702471,6702127,6697652,6697344,6696593,6696379,6694431,6693412,6692924,6690629,6686746,6686124,6684988,6684775,6684560,6684388,6682142,6681941,6680158,6679407,6679125,6678372,6678152,6677704	6720682,6719403,6718412,6718164,6714446,6714248,6714082,6713509,6713315,6712623,6712406,6711196,6710845,6709842,6707929,6707537,6707273,6702579,6702212,6697794,6697556,6696659,6696465,6694634,6693487,6693083,6690727,6686902,6686287,6685146,6684834,6684650,6684439,6682229,6682030,6680263,6679496,6679208,6678455,6678287,6678023	Gene ID= ENSG00000125730.16 TPM= 17.38 Transcript Type= protein_coding
chr19	6729914	6737603	6729914	6737603	-	ENST00000264080.11@GPR108	ENST00000264080.11	protein_coding	6737457,6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732987,6732476,6732263,6732025,6731891,6731473,6731199,6730987,6729914	6737603,6736711,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6733062,6732549,6732380,6732155,6731934,6731522,6731282,6731111,6730384	Gene ID= ENSG00000125734.15 TPM= 1.93 Transcript Type= protein_coding
chr19	6730098	6737560	6730098	6737560	-	ENST00000597706.5@GPR108	ENST00000597706.5	protein_coding	6737457,6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732987,6732472,6732263,6732025,6731891,6731473,6731199,6730987,6730098	6737560,6736711,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6733062,6732549,6732380,6732155,6731934,6731522,6731282,6731111,6730384	Gene ID= ENSG00000125734.15 TPM= 17.38 Transcript Type= nonsense_mediated_decay
chr19	6739645	6751500	6739645	6751500	+	transcript1380.chr19.nic@TRIP10	transcript1380.chr19.nic	protein_coding	6739645,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746178,6746452,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751500	Gene ID= ENSG00000125733.17 TPM= 20.17 Transcript Type= NA
chr19	6739680	6751526	6739680	6751526	+	ENST00000313285.12@TRIP10	ENST00000313285.12	protein_coding	6739680,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746452,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746561,6750066,6750431,6750633,6751526	Gene ID= ENSG00000125733.17 TPM= 20.54 Transcript Type= protein_coding
chr19	6739727	6751523	6739727	6751523	+	ENST00000313244.13@TRIP10	ENST00000313244.13	protein_coding	6739727,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746029,6746452,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751523	Gene ID= ENSG00000125733.17 TPM= 398.91 Transcript Type= protein_coding
chr19	6739714	6751509	6739714	6751509	+	ENST00000600677.5@TRIP10	ENST00000600677.5	protein_coding	6739714,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746178,6746433,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751509	Gene ID= ENSG00000125733.17 TPM= 24.2 Transcript Type= nonsense_mediated_decay
chr19	7069444	7084218	7069444	7084218	+	ENST00000252840.10@ZNF557	ENST00000252840.10	protein_coding	7069444,7070562,7074996,7075655,7076381,7081360,7081970,7082878	7069773,7070653,7075105,7075743,7076507,7081455,7082052,7084218	Gene ID= ENSG00000130544.11 TPM= 1.93 Transcript Type= protein_coding
chr19	7476875	7489019	7476875	7489019	-	ENST00000221480.5@PEX11G	ENST00000221480.5	protein_coding	7488951,7485838,7482033,7478314,7476875	7489019,7486026,7482211,7478376,7477436	Gene ID= ENSG00000104883.7 TPM= 2.9 Transcript Type= protein_coding
chr19	7516118	7521026	7516118	7521026	+	ENST00000597229.1@ZNF358	ENST00000597229.1	protein_coding	7516118,7519205	7516249,7521026	Gene ID= ENSG00000198816.6 TPM= 187.27 Transcript Type= protein_coding
chr19	7522626	7534009	7522626	7534009	+	ENST00000264079.10@MCOLN1	ENST00000264079.10	protein_coding	7522626,7524961,7526439,7526761,7527520,7527864,7528158,7528597,7528821,7529101,7529590,7530286,7533523,7533759	7522781,7525166,7526606,7526926,7527628,7527960,7528257,7528703,7528970,7529202,7529712,7530501,7533653,7534009	Gene ID= ENSG00000090674.15 TPM= 37.65 Transcript Type= protein_coding
chr19	7534188	7561764	7534188	7561764	+	transcript1434.chr19.nnic@PNPLA6	transcript1434.chr19.nnic	protein_coding	7534188,7535509,7535933,7536191,7536449,7539918,7540149,7540630,7540923,7541354,7541522,7541984,7542561,7542761,7543007,7549907,7550298,7550517,7550994,7551362,7553875,7554209,7554555,7554893,7555249,7555607,7556453,7556655,7557168,7558850,7560648,7561014,7561208,7561488	7534239,7535577,7536020,7536273,7536546,7540058,7540308,7540710,7541051,7541434,7541684,7542067,7542670,7542928,7543084,7550112,7550429,7550640,7551107,7551437,7554015,7554272,7554723,7555075,7555367,7555763,7556569,7556724,7557284,7559151,7560764,7561110,7561317,7561764	Gene ID= ENSG00000032444.15 TPM= 39.58 Transcript Type= NA
chr19	7535715	7561764	7535715	7561764	+	transcript1436.chr19.nic@PNPLA6	transcript1436.chr19.nic	protein_coding	7535715,7536191,7536449,7539918,7540149,7540630,7540923,7541354,7541522,7541984,7542561,7542761,7543007,7549907,7550298,7550517,7550994,7551362,7553872,7554209,7554555,7554893,7555249,7555607,7556453,7556655,7557168,7558850,7560648,7561014,7561208,7561488	7536020,7536273,7536546,7540058,7540308,7540710,7541051,7541434,7541684,7542067,7542670,7542928,7543084,7550112,7550429,7550640,7551107,7551437,7554015,7554272,7554723,7555075,7555367,7555763,7556569,7556724,7557284,7559151,7560764,7561110,7561317,7561764	Gene ID= ENSG00000032444.15 TPM= 49.23 Transcript Type= NA
chr19	7619525	7629565	7619525	7629565	-	ENST00000358368.4@XAB2	ENST00000358368.4	protein_coding	7629477,7628150,7627728,7627243,7626136,7625880,7624301,7623731,7623170,7622762,7622530,7622331,7621135,7620846,7620547,7620275,7619946,7619747,7619525	7629565,7628298,7627851,7627440,7626270,7626044,7624445,7623882,7623289,7622893,7622661,7622444,7621297,7621036,7620669,7620446,7620075,7619856,7619647	Gene ID= ENSG00000076924.11 TPM= 64.68 Transcript Type= protein_coding
chr19	7629737	7631956	7629737	7631956	+	ENST00000594797.5@PET100	ENST00000594797.5	protein_coding	7629737,7630573,7630823,7631473	7629860,7630659,7630846,7631956	Gene ID= ENSG00000229833.9 TPM= 31.86 Transcript Type= protein_coding
chr19	7637119	7647873	7637119	7647873	+	ENST00000221283.9@STXBP2	ENST00000221283.9	protein_coding	7637119,7638726,7639019,7639731,7640731,7640900,7641705,7642034,7642203,7642429,7642766,7642983,7643165,7644614,7645197,7646249,7647162,7647354,7647725	7637186,7638775,7639100,7639807,7640809,7641003,7641853,7642118,7642333,7642536,7642823,7643048,7643245,7644752,7645306,7646344,7647247,7647511,7647873	Gene ID= ENSG00000076944.15 TPM= 1.93 Transcript Type= protein_coding
chr19	7680879	7682858	7680879	7682858	+	ENST00000426877.2@TRAPPC5	ENST00000426877.2	protein_coding	7680879,7682242	7681026,7682858	Gene ID= ENSG00000181029.8 TPM= 14.48 Transcript Type= protein_coding
chr19	7680875	7682856	7680875	7682856	+	ENST00000317378.5@TRAPPC5	ENST00000317378.5	protein_coding	7680875,7682242	7681049,7682856	Gene ID= ENSG00000181029.8 TPM= 19.31 Transcript Type= protein_coding
chr19	7830199	7864976	7830199	7864976	+	transcript1455.chr19.nic@EVI5L	transcript1455.chr19.nic	protein_coding	7830199,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7857092,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7857124,7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864976	Gene ID= ENSG00000142459.8 TPM= 16.89 Transcript Type= NA
chr19	7830216	7864976	7830216	7864976	+	transcript1456.chr19.nnic@EVI5L	transcript1456.chr19.nnic	protein_coding	7830216,7846582,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7857092,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7857124,7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864976	Gene ID= ENSG00000142459.8 TPM= 2.41 Transcript Type= NA
chr19	7830199	7864973	7830199	7864973	+	transcript1457.chr19.nic@EVI5L	transcript1457.chr19.nic	protein_coding	7830199,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7857092,7858191,7860561,7861878,7862122,7862388,7862972,7863185	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7857124,7858331,7860689,7862018,7862277,7862534,7863067,7864973	Gene ID= ENSG00000142459.8 TPM= 9.65 Transcript Type= NA
chr19	7830199	7864976	7830199	7864976	+	transcript1458.chr19.nnic@EVI5L	transcript1458.chr19.nnic	protein_coding	7830199,7846496,7847732,7848921,7849256,7849997,7851681,7853086,7853273,7856015,7857092,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424	7830381,7846679,7847921,7849145,7849330,7850122,7851770,7853183,7853333,7856068,7857124,7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864976	Gene ID= ENSG00000142459.8 TPM= 1.93 Transcript Type= NA
chr19	7830233	7864976	7830233	7864976	+	ENST00000270530.8@EVI5L	ENST00000270530.8	protein_coding	7830233,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864976	Gene ID= ENSG00000142459.8 TPM= 5.79 Transcript Type= protein_coding
chr19	7916541	7919090	7916541	7919090	+	transcript1461.chr19.nic@TGFBR3L	transcript1461.chr19.nic	protein_coding	7916541,7917473,7917701,7918057,7918917	7916942,7917599,7917859,7918129,7919090	Gene ID= ENSG00000260001.6 TPM= 7.72 Transcript Type= NA
chr19	7916921	7919090	7916921	7919090	+	transcript1464.chr19.nnic@TGFBR3L	transcript1464.chr19.nnic	protein_coding	7916921,7917473,7917701,7918057,7918917	7917226,7917599,7917859,7918129,7919090	Gene ID= ENSG00000260001.6 TPM= 2.9 Transcript Type= NA
chr19	7916538	7919090	7916538	7919090	+	transcript1475.chr19.nic@TGFBR3L	transcript1475.chr19.nic	protein_coding	7916538,7918917	7918129,7919090	Gene ID= ENSG00000260001.6 TPM= 5.79 Transcript Type= NA
chr19	7917628	7919090	7917628	7919090	+	ENST00000566166.1@TGFBR3L	ENST00000566166.1	protein_coding	7917628,7918057,7918917	7917859,7918129,7919090	Gene ID= ENSG00000260001.6 TPM= 4.83 Transcript Type= retained_intron
chr19	7920316	7923250	7920316	7923250	+	ENST00000221573.10@SNAPC2	ENST00000221573.10	protein_coding	7920316,7921423,7921705,7922035,7922445	7920549,7921542,7921773,7922347,7923250	Gene ID= ENSG00000104976.11 TPM= 10.62 Transcript Type= protein_coding
chr19	7921015	7923250	7921015	7923250	+	ENST00000597584.5@SNAPC2	ENST00000597584.5	protein_coding	7921015,7921423,7921705,7922035,7922445	7921119,7921542,7921773,7922347,7923250	Gene ID= ENSG00000104976.11 TPM= 2.9 Transcript Type= protein_coding
chr19	7926721	7943750	7926721	7943750	-	transcript1483.chr19.nic@TIMM44	transcript1483.chr19.nic	protein_coding	7943607,7941102,7938027,7935065,7934089,7933864,7933485,7932840,7932627,7931138,7927657,7926721	7943750,7941197,7938197,7935145,7934238,7934003,7933570,7932932,7932751,7931188,7927767,7927306	Gene ID= ENSG00000104980.7 TPM= 4.83 Transcript Type= NA
chr19	7926740	7943920	7926740	7943920	-	ENST00000270538.7@TIMM44	ENST00000270538.7	protein_coding	7943607,7941102,7938027,7935065,7934089,7933864,7933485,7932840,7932627,7931138,7928077,7927657,7926740	7943920,7941197,7938197,7935145,7934238,7934003,7933570,7932932,7932751,7931188,7928166,7927767,7927306	Gene ID= ENSG00000104980.7 TPM= 5.79 Transcript Type= protein_coding
chr19	7962275	8005677	7962275	8005677	-	transcript1496.chr19.nnic@ELAVL1	transcript1496.chr19.nnic	protein_coding	8005495,7991644,7981083,7973725,7962275	8005677,7991831,7981186,7973878,7963807	Gene ID= ENSG00000066044.14 TPM= 7.24 Transcript Type= NA
chr19	8302127	8308344	8302127	8308344	-	transcript1518.chr19.nnic@CD320	transcript1518.chr19.nnic	protein_coding	8308149,8305031,8303855,8302777,8302127	8308344,8305156,8303956,8302980,8302605	Gene ID= ENSG00000167775.10 TPM= 2.41 Transcript Type= NA
chr19	8302127	8308364	8302127	8308364	-	transcript1519.chr19.nnic@CD320	transcript1519.chr19.nnic	protein_coding	8308149,8305031,8303855,8302777,8302127	8308364,8305538,8303973,8302980,8302605	Gene ID= ENSG00000167775.10 TPM= 2.41 Transcript Type= NA
chr19	8302127	8308355	8302127	8308355	-	ENST00000301458.9@CD320	ENST00000301458.9	protein_coding	8308149,8305031,8303855,8302777,8302127	8308355,8305156,8304088,8302980,8302605	Gene ID= ENSG00000167775.10 TPM= 87.84 Transcript Type= protein_coding
chr19	8302127	8308350	8302127	8308350	-	ENST00000537716.6@CD320	ENST00000537716.6	protein_coding	8308149,8303855,8302777,8302127	8308350,8304088,8302980,8302605	Gene ID= ENSG00000167775.10 TPM= 1.93 Transcript Type= protein_coding
chr19	8321500	8323340	8321500	8323340	+	ENST00000600659.2@RPS28	ENST00000600659.2	protein_coding	8321500,8321656,8321953,8322272	8321569,8321703,8322091,8323340	Gene ID= ENSG00000233927.4 TPM= 723.02 Transcript Type= protein_coding
chr19	8322584	8343262	8322584	8343262	-	transcript1505.chr19.nnic@KANK3	transcript1505.chr19.nnic	protein_coding	8343051,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8322584	8343262,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8322922	Gene ID= ENSG00000186994.11 TPM= 3.86 Transcript Type= NA
chr19	8322584	8343262	8322584	8343262	-	ENST00000330915.7@KANK3	ENST00000330915.7	protein_coding	8343225,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8322584	8343262,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8322922	Gene ID= ENSG00000186994.11 TPM= 92.19 Transcript Type= protein_coding
chr19	8323315	8343262	8323315	8343262	-	ENST00000593649.5@KANK3	ENST00000593649.5	protein_coding	8343225,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8323315	8343262,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8323538	Gene ID= ENSG00000186994.11 TPM= 5.31 Transcript Type= protein_coding
chr19	8341412	8343266	8341412	8343266	-	transcript1529.chr19.nnic@NA	transcript1529.chr19.nnic	NA	8341412	8343266	Gene ID= novel_gene_chr19_1530 TPM= 5.79 Transcript Type= NA
chr19	8364151	8374370	8364151	8374370	+	transcript1532.chr19.nnic@ANGPTL4	transcript1532.chr19.nnic	protein_coding	8364151,8365954,8366202,8369219,8371056,8371241,8373651	8364639,8366064,8366319,8369332,8371151,8371522,8374370	Gene ID= ENSG00000167772.11 TPM= 5.74 Transcript Type= NA
chr19	8364151	8374373	8364151	8374373	+	ENST00000301455.6@ANGPTL4	ENST00000301455.6	protein_coding	8364151,8365954,8366202,8369219,8371056,8371241,8373705	8364639,8366064,8366319,8369332,8371151,8371522,8374373	Gene ID= ENSG00000167772.11 TPM= 53.36 Transcript Type= protein_coding
chr19	8364151	8374373	8364151	8374373	+	transcript1534.chr19.nic@ANGPTL4	transcript1534.chr19.nic	protein_coding	8364151,8365954,8366202,8369219,8371056,8373705	8364639,8366064,8366319,8369332,8371522,8374373	Gene ID= ENSG00000167772.11 TPM= 9.92 Transcript Type= NA
chr19	8364151	8374373	8364151	8374373	+	transcript1539.chr19.nic@ANGPTL4	transcript1539.chr19.nic	protein_coding	8364151,8365954,8366202,8371056,8373705	8364639,8366064,8366319,8371522,8374373	Gene ID= ENSG00000167772.11 TPM= 4.13 Transcript Type= NA
chr19	8364169	8374331	8364169	8374331	+	ENST00000393962.6@ANGPTL4	ENST00000393962.6	protein_coding	8364169,8365954,8366202,8371056,8371241,8373705	8364639,8366064,8366319,8371151,8371522,8374331	Gene ID= ENSG00000167772.11 TPM= 8.88 Transcript Type= protein_coding
chr19	8374379	8390685	8374379	8390685	-	ENST00000593581.5@RAB11B-AS1	ENST00000593581.5	antisense_RNA	8390009,8376962,8374379	8390685,8377067,8374608	Gene ID= ENSG00000269386.5 TPM= 11.58 Transcript Type= antisense_RNA
chr19	8390199	8404434	8390199	8404434	+	ENST00000328024.10@RAB11B	ENST00000328024.10	protein_coding	8390199,8399863,8402086,8402485,8403413	8390456,8400058,8402279,8402565,8404434	Gene ID= ENSG00000185236.11 TPM= 201.75 Transcript Type= protein_coding
chr19	8413278	8439017	8413278	8439017	+	transcript1569.chr19.nic@MARCH2	transcript1569.chr19.nic	protein_coding	8413278,8418537,8421789,8426609,8430658,8438388	8413420,8418807,8422016,8426804,8430867,8439017	Gene ID= ENSG00000099785.10 TPM= 28.96 Transcript Type= NA
chr19	8413283	8439017	8413283	8439017	+	transcript1570.chr19.nic@MARCH2	transcript1570.chr19.nic	protein_coding	8413283,8418742,8421789,8426609,8430658,8438388	8413420,8418807,8422016,8426804,8430867,8439017	Gene ID= ENSG00000099785.10 TPM= 11.58 Transcript Type= NA
chr19	8413270	8439004	8413270	8439004	+	ENST00000381035.8@MARCH2	ENST00000381035.8	protein_coding	8413270,8421789,8426609,8438388	8413420,8422016,8426804,8439004	Gene ID= ENSG00000099785.10 TPM= 1.93 Transcript Type= protein_coding
chr19	8413303	8439011	8413303	8439011	+	ENST00000215555.6@MARCH2	ENST00000215555.6	protein_coding	8413303,8421789,8426609,8430658,8438388	8413420,8422016,8426804,8430867,8439011	Gene ID= ENSG00000099785.10 TPM= 53.09 Transcript Type= protein_coding
chr19	8444767	8489114	8444767	8489114	+	ENST00000348943.7@HNRNPM	ENST00000348943.7	protein_coding	8444767,8455405,8462529,8463497,8463593,8465324,8465480,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465362,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 33.35 Transcript Type= protein_coding
chr19	8444947	8489114	8444947	8489114	+	transcript1553.chr19.nic@HNRNPM	transcript1553.chr19.nic	protein_coding	8444947,8455405,8462529,8463497,8463593,8465324,8465480,8466235,8467535,8468774,8471326,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465362,8465515,8466388,8467584,8468834,8471427,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 3.43 Transcript Type= NA
chr19	8444947	8489114	8444947	8489114	+	transcript1557.chr19.nic@HNRNPM	transcript1557.chr19.nic	protein_coding	8444947,8455405,8462529,8463497,8463593,8465324,8466235,8467535,8468774,8471326,8473664,8474167,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 4.09 Transcript Type= NA
chr19	8444947	8489114	8444947	8489114	+	transcript1560.chr19.nic@HNRNPM	transcript1560.chr19.nic	protein_coding	8444947,8455405,8463497,8463593,8465324,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8463504,8463686,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 12.11 Transcript Type= NA
chr19	8444947	8489114	8444947	8489114	+	transcript1562.chr19.nnic@HNRNPM	transcript1562.chr19.nnic	protein_coding	8444947,8455405,8462529,8463593,8465324,8466235,8467535,8468774,8471326,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8462581,8463686,8465515,8466388,8467584,8468834,8471427,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 6.32 Transcript Type= NA
chr19	8444958	8489114	8444958	8489114	+	ENST00000325495.8@HNRNPM	ENST00000325495.8	protein_coding	8444958,8455405,8462529,8463497,8463593,8465324,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 48.8 Transcript Type= protein_coding
chr19	8444977	8489110	8444977	8489110	+	ENST00000600806.5@HNRNPM	ENST00000600806.5	protein_coding	8444977,8455405,8463497,8463593,8465324,8466235,8467535,8468774,8471326,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8463504,8463686,8465515,8466388,8467584,8468834,8471427,8474244,8483211,8486405,8487075,8489110	Gene ID= ENSG00000099783.11 TPM= 2.17 Transcript Type= nonsense_mediated_decay
chr19	8455946	8459564	8455946	8459564	-	transcript1581.chr19.nnic@NA	transcript1581.chr19.nnic	NA	8455946	8459564	Gene ID= novel_gene_chr19_1582 TPM= 3.86 Transcript Type= NA
chr19	8510580	8514167	8510580	8514167	-	transcript1585.chr19.nic@ZNF414	transcript1585.chr19.nic	protein_coding	8514044,8513029,8512604,8512387,8511617,8511486,8510580	8514167,8513341,8512711,8512492,8511960,8511536,8511024	Gene ID= ENSG00000133250.13 TPM= 3.86 Transcript Type= NA
chr19	8511335	8514148	8511335	8514148	-	ENST00000255616.8@ZNF414	ENST00000255616.8	protein_coding	8514044,8513029,8512604,8512387,8511617,8511335	8514148,8513341,8512711,8512492,8511960,8511536	Gene ID= ENSG00000133250.13 TPM= 1.93 Transcript Type= protein_coding
chr19	8809706	8832304	8809706	8832304	-	transcript1593.chr19.nic@ZNF558	transcript1593.chr19.nic	protein_coding	8832079,8831318,8825002,8824082,8822629,8822003,8821180,8813127,8812561,8809706	8832304,8831401,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063	Gene ID= ENSG00000167785.8 TPM= 3.86 Transcript Type= NA
chr19	8816775	8832304	8816775	8832304	-	transcript1595.chr19.nnic@ZNF558	transcript1595.chr19.nnic	protein_coding	8832079,8831318,8825002,8824082,8822629,8822003,8821180,8816775	8832304,8831401,8825108,8824417,8822724,8822091,8821306,8818443	Gene ID= ENSG00000167785.8 TPM= 1.93 Transcript Type= NA
chr19	9140380	9163413	9140380	9163413	+	ENST00000247956.10@ZNF317	ENST00000247956.10	protein_coding	9140380,9155925,9156612,9157268,9157980,9158826,9160114	9140592,9156041,9156748,9157394,9158075,9158908,9163413	Gene ID= ENSG00000130803.14 TPM= 16.73 Transcript Type= protein_coding
chr19	9157682	9163413	9157682	9163413	+	transcript1601.chr19.nic@ZNF317	transcript1601.chr19.nic	protein_coding	9157682,9158826,9160114	9158075,9158908,9163413	Gene ID= ENSG00000130803.14 TPM= 6.11 Transcript Type= NA
chr19	9140397	9163408	9140397	9163408	+	ENST00000360385.7@ZNF317	ENST00000360385.7	protein_coding	9140397,9155925,9156612,9157268,9158826,9160114	9140592,9156041,9156748,9157394,9158908,9163408	Gene ID= ENSG00000130803.14 TPM= 6.11 Transcript Type= protein_coding
chr19	9412598	9435576	9412598	9435576	-	transcript1618.chr19.nnic@ZNF266	transcript1618.chr19.nnic	protein_coding	9435284,9435108,9434798,9420065,9419217,9418505,9417828,9415654,9412598	9435576,9435193,9434859,9420218,9419299,9418631,9417908,9415742,9414720	Gene ID= ENSG00000174652.17 TPM= 4.34 Transcript Type= NA
chr19	9412598	9435576	9412598	9435576	-	transcript1619.chr19.nnic@ZNF266	transcript1619.chr19.nnic	protein_coding	9435284,9435108,9420065,9419217,9418505,9417828,9415654,9412598	9435576,9435193,9420218,9419299,9418631,9417908,9415742,9414720	Gene ID= ENSG00000174652.17 TPM= 2.41 Transcript Type= NA
chr19	9528007	9538615	9528007	9538615	-	transcript1623.chr19.nic@ZNF426	transcript1623.chr19.nic	protein_coding	9538259,9536208,9535188,9533840,9532845,9530985,9528007	9538615,9536356,9535279,9533966,9532925,9531067,9529636	Gene ID= ENSG00000130818.11 TPM= 6.76 Transcript Type= NA
chr19	9610051	9621225	9610051	9621225	-	transcript1634.chr19.nic@ZNF561	transcript1634.chr19.nic	protein_coding	9620916,9619432,9618091,9617045,9614021,9610051	9621225,9619582,9618179,9617171,9614103,9611336	Gene ID= ENSG00000171469.10 TPM= 1.93 Transcript Type= NA
chr19	9810267	9819079	9810267	9819079	-	ENST00000589626.5@FBXL12	ENST00000589626.5	protein_coding	9818728,9818545,9813231,9810267	9819079,9818617,9813274,9811717	Gene ID= ENSG00000127452.8 TPM= 24.13 Transcript Type= protein_coding
chr19	9810271	9819076	9810271	9819076	-	ENST00000588922.5@FBXL12	ENST00000588922.5	protein_coding	9818754,9818545,9810271	9819076,9818617,9811717	Gene ID= ENSG00000127452.8 TPM= 9.17 Transcript Type= protein_coding
chr19	9810267	9819055	9810267	9819055	-	ENST00000247977.8@FBXL12	ENST00000247977.8	protein_coding	9818728,9818545,9810267	9819055,9818617,9811717	Gene ID= ENSG00000127452.8 TPM= 12.07 Transcript Type= protein_coding
chr19	9827892	9830115	9827892	9830115	+	ENST00000358666.7@UBL5	ENST00000358666.7	protein_coding	9827892,9828327,9828592,9828837,9829965	9828064,9828393,9828675,9828874,9830115	Gene ID= ENSG00000198258.10 TPM= 46.02 Transcript Type= protein_coding
chr19	9827892	9830114	9827892	9830114	+	ENST00000586895.5@UBL5	ENST00000586895.5	protein_coding	9827892,9828327,9828592,9828837,9829965	9827984,9828393,9828675,9828874,9830114	Gene ID= ENSG00000198258.10 TPM= 98.63 Transcript Type= protein_coding
chr19	9827915	9830113	9827915	9830113	+	ENST00000593087.1@UBL5	ENST00000593087.1	protein_coding	9827915,9828327,9828837,9829965	9827984,9828389,9828874,9830113	Gene ID= ENSG00000198258.10 TPM= 7.24 Transcript Type= protein_coding
chr19	9835323	9849682	9835323	9849682	+	ENST00000247970.8@PIN1	ENST00000247970.8	protein_coding	9835323,9838436,9848030,9849090	9835402,9838648,9848140,9849682	Gene ID= ENSG00000127445.13 TPM= 165.07 Transcript Type= protein_coding
chr19	9835341	9849682	9835341	9849682	+	ENST00000588695.5@PIN1	ENST00000588695.5	protein_coding	9835341,9838436,9848030,9849090,9849533	9835402,9838648,9848140,9849201,9849682	Gene ID= ENSG00000127445.13 TPM= 6.76 Transcript Type= protein_coding
chr19	9835331	9849682	9835331	9849682	+	ENST00000586025.5@PIN1	ENST00000586025.5	protein_coding	9835331,9848030,9849090	9838648,9848140,9849682	Gene ID= ENSG00000127445.13 TPM= 2.9 Transcript Type= retained_intron
chr19	9959561	10010471	9959561	10010471	-	ENST00000264828.3@COL5A3	ENST00000264828.3	protein_coding	10010298,10006073,10005796,10005558,10004041,10003565,10001768,10001524,9998102,9997984,9997371,9996615,9996433,9996206,9996066,9995564,9993753,9993619,9993380,9993023,9992827,9992004,9991788,9991610,9989469,9989322,9989124,9986714,9986553,9986315,9985842,9982065,9981088,9980806,9980648,9979994,9979839,9979364,9979132,9978891,9978574,9977594,9977365,9977229,9976558,9974301,9974171,9973919,9973756,9973570,9972919,9971205,9970975,9970622,9969869,9969575,9969349,9968675,9968385,9968026,9967904,9967347,9966536,9966314,9962819,9960651,9959561	10010471,10006231,10005985,10005714,10004145,10003714,10001881,10001670,9998149,9998025,9997433,9996689,9996516,9996262,9996119,9995617,9993806,9993672,9993433,9993067,9992880,9992048,9991841,9991654,9989522,9989366,9989177,9986758,9986606,9986422,9985895,9982118,9981132,9980859,9980692,9980047,9979892,9979417,9979239,9978980,9978627,9977701,9977472,9977282,9976611,9974408,9974224,9973972,9973809,9973623,9973026,9971258,9971028,9970675,9969922,9969682,9969402,9968728,9968492,9968079,9967939,9967400,9966746,9966426,9962887,9960890,9960557	Gene ID= ENSG00000080573.6 TPM= 14.48 Transcript Type= protein_coding
chr19	10086130	10093245	10086130	10093245	+	ENST00000253110.15@C19orf66	ENST00000253110.15	protein_coding	10086130,10086929,10087251,10089657,10089898,10091250,10091476,10092070	10086448,10087052,10087300,10089695,10090047,10091353,10091630,10093245	Gene ID= ENSG00000130813.17 TPM= 4.83 Transcript Type= protein_coding
chr19	10106289	10111294	10106289	10111294	+	ENST00000253107.11@PPAN	ENST00000253107.11	protein_coding	10106289,10106501,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110485,10110697,10110945	10106412,10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110402,10110614,10110866,10111294	Gene ID= ENSG00000130810.19 TPM= 178.9 Transcript Type= protein_coding
chr19	10106419	10111254	10106419	10111254	+	ENST00000393793.5@PPAN	ENST00000393793.5	protein_coding	10106419,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110485,10110697,10110945	10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110402,10110614,10110866,10111254	Gene ID= ENSG00000130810.19 TPM= 4.83 Transcript Type= protein_coding
chr19	10115017	10119902	10115017	10119902	-	ENST00000253108.8@EIF3G	ENST00000253108.8	protein_coding	10119840,10119654,10119088,10118868,10118668,10117084,10116800,10115967,10115684,10115479,10115017	10119902,10119700,10119171,10118956,10118727,10117188,10116989,10116074,10115820,10115585,10115129	Gene ID= ENSG00000130811.11 TPM= 425.7 Transcript Type= protein_coding
chr19	10133540	10195079	10133540	10195079	-	ENST00000359526.8@DNMT1	ENST00000359526.8	protein_coding	10194820,10182041,10180778,10180350,10180187,10177292,10175540,10173871,10173090,10168330,10166598,10163326,10162667,10160384,10160018,10159842,10159658,10156391,10155853,10154905,10154586,10154293,10151750,10151398,10149853,10149453,10148884,10146351,10143766,10142028,10141105,10140781,10140046,10139676,10138439,10137832,10137085,10136121,10135736,10134217,10133540	10195079,10182077,10180885,10180569,10180234,10177367,10175618,10173905,10173174,10168364,10166685,10163360,10162748,10160418,10160063,10159922,10159767,10156509,10155945,10155056,10154773,10154479,10151847,10151545,10149968,10149657,10149017,10146524,10143987,10142220,10141189,10140909,10140328,10139817,10138605,10138009,10137280,10136287,10135852,10134307,10133701	Gene ID= ENSG00000130816.14 TPM= 1.93 Transcript Type= protein_coding
chr19	10133346	10195135	10133346	10195135	-	ENST00000340748.8@DNMT1	ENST00000340748.8	protein_coding	10194820,10182041,10180778,10180350,10177292,10175540,10173871,10173090,10168330,10166598,10163326,10162667,10160384,10160018,10159842,10159658,10156391,10155853,10154905,10154586,10154293,10151750,10151398,10149853,10149453,10148884,10146351,10143766,10142028,10141105,10140781,10140046,10139676,10138439,10137832,10137085,10136121,10135736,10134217,10133346	10195135,10182077,10180885,10180569,10177367,10175618,10173905,10173174,10168364,10166685,10163360,10162748,10160418,10160063,10159922,10159767,10156509,10155945,10155056,10154773,10154479,10151847,10151545,10149968,10149657,10149017,10146524,10143987,10142220,10141189,10140909,10140328,10139817,10138605,10138009,10137280,10136287,10135852,10134307,10133701	Gene ID= ENSG00000130816.14 TPM= 2.9 Transcript Type= protein_coding
chr19	10252242	10260045	10252242	10260045	+	transcript1713.chr19.nic@MRPL4	transcript1713.chr19.nic	protein_coding	10252242,10252397,10252551,10254589,10256708,10258222,10258413,10259617	10252310,10252463,10252701,10254640,10256825,10258328,10258685,10260045	Gene ID= ENSG00000105364.13 TPM= 2.9 Transcript Type= NA
chr19	10252213	10259125	10252213	10259125	+	transcript1714.chr19.nic@MRPL4	transcript1714.chr19.nic	protein_coding	10252213,10252397,10252551,10254589,10256708,10258222,10258413	10252310,10252463,10252701,10254640,10256825,10258328,10259125	Gene ID= ENSG00000105364.13 TPM= 5.79 Transcript Type= NA
chr19	10251967	10260045	10251967	10260045	+	ENST00000253099.10@MRPL4	ENST00000253099.10	protein_coding	10251967,10252397,10252551,10254589,10256708,10258222,10258413,10258609,10259617	10252310,10252463,10252701,10254640,10256825,10258328,10258522,10258685,10260045	Gene ID= ENSG00000105364.13 TPM= 82.05 Transcript Type= protein_coding
chr19	10333436	10336248	10333436	10336248	+	ENST00000612689.1@AC114271.1	ENST00000612689.1	antisense_RNA	10333436	10336248	Gene ID= ENSG00000274425.1 TPM= 4.83 Transcript Type= antisense_RNA
chr19	10350533	10380676	10350533	10380676	-	ENST00000525621.5@TYK2	ENST00000525621.5	protein_coding	10380380,10379615,10378214,10368295,10368055,10366417,10365517,10364851,10364614,10362549,10362264,10362078,10361770,10361511,10359175,10358003,10357764,10356568,10354512,10354042,10353528,10352926,10352434,10351052,10350533	10380676,10379779,10378426,10368418,10368202,10366580,10365898,10365048,10364771,10362657,10362456,10362181,10361955,10361598,10359302,10358138,10357918,10356718,10354609,10354234,10353646,10353098,10352551,10351162,10350968	Gene ID= ENSG00000105397.13 TPM= 50.2 Transcript Type= protein_coding
chr19	10350533	10380601	10350533	10380601	-	transcript1737.chr19.nic@TYK2	transcript1737.chr19.nic	protein_coding	10380380,10379615,10378214,10368295,10368055,10366417,10365517,10364851,10364614,10362549,10362264,10362078,10361770,10361511,10359175,10358003,10357764,10356568,10354512,10353528,10352926,10352434,10351052,10350533	10380601,10379779,10378426,10368418,10368202,10366580,10365898,10365048,10364771,10362657,10362456,10362181,10361955,10361598,10359302,10358138,10357918,10356718,10354609,10354234,10353098,10352551,10351162,10350968	Gene ID= ENSG00000105397.13 TPM= 5.79 Transcript Type= NA
chr19	10391134	10403533	10391134	10403533	-	ENST00000222005.6@CDC37	ENST00000222005.6	protein_coding	10403378,10395928,10395435,10395228,10395021,10393259,10393086,10391134	10403533,10396203,10395543,10395343,10395143,10393441,10393157,10391706	Gene ID= ENSG00000105401.8 TPM= 341 Transcript Type= protein_coding
chr19	10391453	10403530	10391453	10403530	-	ENST00000591248.5@CDC37	ENST00000591248.5	protein_coding	10403378,10395928,10395228,10395021,10393259,10393086,10391453	10403530,10396203,10395543,10395143,10393441,10393157,10391706	Gene ID= ENSG00000105401.8 TPM= 5.07 Transcript Type= retained_intron
chr19	10486120	10503741	10486120	10503741	-	ENST00000171111.9@KEAP1	ENST00000171111.9	protein_coding	10503241,10499395,10491577,10489648,10489192,10486120	10503741,10500080,10492262,10489853,10489368,10486818	Gene ID= ENSG00000079999.13 TPM= 97.54 Transcript Type= protein_coding
chr19	10486126	10502896	10486126	10502896	-	ENST00000393623.6@KEAP1	ENST00000393623.6	protein_coding	10502697,10499395,10491577,10489648,10489192,10486126	10502896,10500080,10492262,10489853,10489368,10486818	Gene ID= ENSG00000079999.13 TPM= 808.97 Transcript Type= protein_coding
chr19	10543882	10553418	10543882	10553418	+	transcript1803.chr19.nic@ATG4D	transcript1803.chr19.nic	protein_coding	10543882,10544709,10544957,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 5.96 Transcript Type= NA
chr19	10543894	10553418	10543894	10553418	+	transcript1804.chr19.nic@ATG4D	transcript1804.chr19.nic	protein_coding	10543894,10544783,10544957,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 11.75 Transcript Type= NA
chr19	10543918	10553418	10543918	10553418	+	ENST00000309469.8@ATG4D	ENST00000309469.8	protein_coding	10543918,10544783,10544957,10546839,10547189,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10547115,10547253,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 86.32 Transcript Type= protein_coding
chr19	10543971	10553418	10543971	10553418	+	ENST00000588667.5@ATG4D	ENST00000588667.5	protein_coding	10543971,10544783,10544957,10547189,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10547253,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 9.09 Transcript Type= nonsense_mediated_decay
chr19	10553078	10566037	10553078	10566037	-	ENST00000312962.10@KRI1	ENST00000312962.10	protein_coding	10565906,10565717,10564929,10562729,10561791,10561667,10561169,10561003,10560312,10559810,10559613,10559359,10558164,10557972,10557769,10557552,10555285,10555087,10553078	10566037,10565790,10565034,10562837,10561845,10561716,10561265,10561080,10560448,10559936,10559708,10559529,10558239,10558060,10557895,10557682,10555349,10555185,10554281	Gene ID= ENSG00000129347.19 TPM= 3.86 Transcript Type= protein_coding
chr19	10553576	10566004	10553576	10566004	-	transcript1790.chr19.nic@KRI1	transcript1790.chr19.nic	protein_coding	10564929,10562729,10561791,10561667,10561169,10561003,10560312,10559810,10559613,10559359,10558164,10557972,10557769,10557552,10555285,10555087,10553576	10566004,10562837,10561845,10561716,10561265,10561080,10560448,10559936,10559708,10559529,10558239,10558060,10557895,10557682,10555349,10555185,10554281	Gene ID= ENSG00000129347.19 TPM= 2.9 Transcript Type= NA
chr19	10553576	10566004	10553576	10566004	-	transcript1791.chr19.nic@KRI1	transcript1791.chr19.nic	protein_coding	10565906,10562729,10561791,10561667,10561169,10561003,10560312,10559810,10559613,10559359,10558164,10557972,10557769,10557552,10555285,10555087,10553576	10566004,10562837,10561845,10561716,10561265,10561080,10560448,10559936,10559708,10559529,10558239,10558060,10557895,10557682,10555349,10555185,10554281	Gene ID= ENSG00000129347.19 TPM= 2.9 Transcript Type= NA
chr19	10566462	10568978	10566462	10568978	-	ENST00000393599.2@CDKN2D	ENST00000393599.2	protein_coding	10568513,10566462	10568978,10567417	Gene ID= ENSG00000129355.6 TPM= 25.1 Transcript Type= protein_coding
chr19	10625517	10644557	10625517	10644557	+	transcript1812.chr19.nic@SLC44A2	transcript1812.chr19.nic	protein_coding	10625517,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10642897,10643279	10625670,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10643021,10644557	Gene ID= ENSG00000129353.14 TPM= 14.84 Transcript Type= NA
chr19	10625258	10644559	10625258	10644559	+	ENST00000335757.9@SLC44A2	ENST00000335757.9	protein_coding	10625258,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10643279	10625670,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644559	Gene ID= ENSG00000129353.14 TPM= 31.26 Transcript Type= protein_coding
chr19	10602510	10644550	10602510	10644550	+	ENST00000407327.8@SLC44A2	ENST00000407327.8	protein_coding	10602510,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10643279	10602561,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644550	Gene ID= ENSG00000129353.14 TPM= 9.45 Transcript Type= protein_coding
chr19	10625525	10644557	10625525	10644557	+	ENST00000586078.5@SLC44A2	ENST00000586078.5	protein_coding	10625525,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10642897	10625670,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644557	Gene ID= ENSG00000129353.14 TPM= 27.07 Transcript Type= protein_coding
chr19	10652349	10653841	10652349	10653841	-	transcript1874.chr19.nnic@ILF3-AS1	transcript1874.chr19.nnic	lincRNA	10653719,10652349	10653841,10653268	Gene ID= ENSG00000267100.1 TPM= 2.9 Transcript Type= NA
chr19	10651862	10653844	10651862	10653844	-	ENST00000591501.1@ILF3-AS1	ENST00000591501.1	lincRNA	10651862	10653844	Gene ID= ENSG00000267100.1 TPM= 13.51 Transcript Type= lincRNA
chr19	10654261	10692417	10654261	10692417	+	ENST00000449870.5@ILF3	ENST00000449870.5	protein_coding	10654261,10670516,10670974,10671358,10677163,10678613,10679097,10679816,10680346,10681019,10681219,10681993,10682537,10683125,10683366,10683636,10683917,10687346,10688550,10689179	10654487,10670608,10671203,10671535,10677310,10678704,10679192,10679927,10680443,10681130,10681329,10682192,10682704,10683262,10683542,10683789,10683970,10687708,10688678,10692417	Gene ID= ENSG00000129351.17 TPM= 73.36 Transcript Type= protein_coding
chr19	10654328	10685765	10654328	10685765	+	ENST00000407004.7@ILF3	ENST00000407004.7	protein_coding	10654328,10670516,10670974,10671358,10677163,10678613,10679097,10679816,10680346,10681019,10681219,10681993,10682537,10683125,10683366,10683636,10683917,10684416	10654487,10670608,10671203,10671535,10677310,10678704,10679192,10679927,10680443,10681130,10681329,10682192,10682704,10683262,10683542,10683789,10683970,10685765	Gene ID= ENSG00000129351.17 TPM= 45.37 Transcript Type= protein_coding
chr19	10701440	10708492	10701440	10708492	+	transcript1863.chr19.nic@QTRT1	transcript1863.chr19.nic	protein_coding	10701440,10701950,10702116,10707302,10707500	10701703,10702018,10702254,10707380,10708492	Gene ID= ENSG00000213339.8 TPM= 4.83 Transcript Type= NA
chr19	10701430	10713345	10701430	10713345	+	ENST00000589488.5@QTRT1	ENST00000589488.5	protein_coding	10701430,10701950,10702116,10707302,10707500,10712161,10712758,10712953,10713118	10701703,10702018,10702254,10707380,10707615,10712628,10712867,10713040,10713345	Gene ID= ENSG00000213339.8 TPM= 2.9 Transcript Type= retained_intron
chr19	10701451	10713365	10701451	10713365	+	ENST00000250237.9@QTRT1	ENST00000250237.9	protein_coding	10701451,10701950,10702116,10707302,10707500,10712161,10712553,10712758,10712953,10713118	10701703,10702018,10702254,10707380,10707615,10712299,10712628,10712867,10713040,10713365	Gene ID= ENSG00000213339.8 TPM= 13.51 Transcript Type= protein_coding
chr19	10718003	10831903	10718003	10831903	+	transcript1830.chr19.nic@DNM2	transcript1830.chr19.nic	protein_coding	10718003,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10797380,10798486,10802288,10803639,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10797518,10798572,10802358,10803668,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10831903	Gene ID= ENSG00000079805.16 TPM= 104.98 Transcript Type= NA
chr19	10718003	10831903	10718003	10831903	+	transcript1832.chr19.nic@DNM2	transcript1832.chr19.nic	protein_coding	10718003,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10796061,10798486,10802288,10803639,10805916,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10796199,10798572,10802358,10803668,10805967,10812377,10820089,10823899,10825221,10829268,10830378,10831903	Gene ID= ENSG00000079805.16 TPM= 59.61 Transcript Type= NA
chr19	10718093	10831884	10718093	10831884	+	ENST00000359692.10@DNM2	ENST00000359692.10	protein_coding	10718093,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10796061,10798486,10802288,10805916,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10796199,10798572,10802358,10805967,10812377,10820089,10823899,10825221,10829268,10830378,10831884	Gene ID= ENSG00000079805.16 TPM= 21.31 Transcript Type= protein_coding
chr19	10718131	10831903	10718131	10831903	+	ENST00000389253.8@DNM2	ENST00000389253.8	protein_coding	10718131,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10797380,10798486,10802288,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10797518,10798572,10802358,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10831903	Gene ID= ENSG00000079805.16 TPM= 98.87 Transcript Type= protein_coding
chr19	10832438	10835583	10832438	10835583	-	transcript1865.chr19.nnic@TMED1	transcript1865.chr19.nnic	protein_coding	10835463,10835256,10834934,10832438	10835583,10835353,10835117,10833213	Gene ID= ENSG00000099203.6 TPM= 1.93 Transcript Type= NA
chr19	10832438	10836290	10832438	10836290	-	ENST00000214869.6@TMED1	ENST00000214869.6	protein_coding	10836009,10835256,10834934,10832438	10836290,10835353,10835117,10833213	Gene ID= ENSG00000099203.6 TPM= 50.2 Transcript Type= protein_coding
chr19	10871513	10923070	10871513	10923070	+	ENST00000327064.8@CARM1	ENST00000327064.8	protein_coding	10871513,10904951,10908039,10909103,10912184,10913877,10916407,10916696,10919595,10919877,10920436,10920659,10920834,10921050,10921375,10921615	10871922,10905076,10908145,10909207,10912294,10914054,10916497,10916777,10919680,10919966,10920573,10920748,10920946,10921127,10921443,10923070	Gene ID= ENSG00000142453.11 TPM= 144.96 Transcript Type= protein_coding
chr19	10871703	10922721	10871703	10922721	+	ENST00000344150.8@CARM1	ENST00000344150.8	protein_coding	10871703,10904951,10908039,10909103,10912184,10913877,10916407,10916696,10919595,10919877,10920436,10920659,10920834,10921050,10921615	10871922,10905076,10908145,10909207,10912294,10914054,10916497,10916777,10919680,10919966,10920573,10920748,10920946,10921127,10922721	Gene ID= ENSG00000142453.11 TPM= 15.37 Transcript Type= protein_coding
chr19	10922185	10928681	10922185	10928681	-	ENST00000253031.6@YIPF2	ENST00000253031.6	protein_coding	10928585,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922185	10928681,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923174	Gene ID= ENSG00000130733.10 TPM= 14.72 Transcript Type= protein_coding
chr19	10922185	10928662	10922185	10928662	-	transcript1907.chr19.nic@YIPF2	transcript1907.chr19.nic	protein_coding	10928511,10928380,10927799,10925686,10924076,10923833,10923495,10923272,10922185	10928662,10928440,10927959,10925773,10924192,10923999,10923677,10923407,10923174	Gene ID= ENSG00000130733.10 TPM= 9.89 Transcript Type= NA
chr19	10922768	10928653	10922768	10928653	-	ENST00000586748.5@YIPF2	ENST00000586748.5	protein_coding	10928511,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922768	10928653,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923174	Gene ID= ENSG00000130733.10 TPM= 1.93 Transcript Type= protein_coding
chr19	10928733	10930254	10928733	10930254	+	ENST00000270502.6@TIMM29	ENST00000270502.6	protein_coding	10928733,10929014	10928916,10930254	Gene ID= ENSG00000142444.6 TPM= 48.27 Transcript Type= protein_coding
chr19	10960885	10996361	10960885	10996361	+	transcript1919.chr19.nnic@SMARCA4	transcript1919.chr19.nnic	protein_coding	10960885,10980777,10984124,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213	10961174,10980852,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996361	Gene ID= ENSG00000127616.17 TPM= 15.44 Transcript Type= NA
chr19	10960844	10996361	10960844	10996361	+	transcript1921.chr19.nic@SMARCA4	transcript1921.chr19.nic	protein_coding	10960844,10984121,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213	10961174,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996361	Gene ID= ENSG00000127616.17 TPM= 57.92 Transcript Type= NA
chr19	10961001	11062059	10961001	11062059	+	ENST00000344626.8@SMARCA4	ENST00000344626.8	protein_coding	10961001,10984121,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213,10996494,11003029,11003340,11007902,11010381,11012949,11018957,11019591,11021725,11023518,11024331,11025422,11026300,11027784,11030730,11033290,11033767,11034123,11034914,11041307,11058255,11058788,11059753,11060045,11061784	10961174,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996380,10996544,11003159,11003397,11008023,11010531,11013112,11019023,11019701,11021967,11023631,11024438,11025508,11026346,11027950,11030893,11033517,11033865,11034200,11035132,11041560,11058363,11058889,11059885,11060187,11062059	Gene ID= ENSG00000127616.17 TPM= 21.24 Transcript Type= protein_coding
chr19	11145494	11155808	11145494	11155808	-	ENST00000592540.5@SPC24	ENST00000592540.5	protein_coding	11155617,11149094,11148013,11147818,11145494	11155808,11149238,11148117,11147894,11147289	Gene ID= ENSG00000161888.11 TPM= 3.86 Transcript Type= protein_coding
chr19	11165573	11197566	11165573	11197566	-	transcript1929.chr19.nic@KANK2	transcript1929.chr19.nic	protein_coding	11197485,11196050,11195556,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11165573	11197566,11196227,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 6.54 Transcript Type= NA
chr19	11164267	11197573	11164267	11197573	-	transcript1932.chr19.nic@KANK2	transcript1932.chr19.nic	protein_coding	11197485,11195556,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164267	11197573,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 12.02 Transcript Type= NA
chr19	11165573	11197573	11165573	11197573	-	transcript1939.chr19.nic@KANK2	transcript1939.chr19.nic	protein_coding	11197485,11195622,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11165573	11197573,11195820,11194590,11194042,11178720,11178471,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 5.34 Transcript Type= NA
chr19	11164267	11197521	11164267	11197521	-	ENST00000586659.5@KANK2	ENST00000586659.5	protein_coding	11197485,11195622,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164267	11197521,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 17.33 Transcript Type= protein_coding
chr19	11199295	11262452	11199295	11262452	-	ENST00000294618.11@DOCK6	ENST00000294618.11	protein_coding	11262397,11253639,11252783,11252482,11252119,11250874,11248066,11245812,11245563,11243802,11243557,11243258,11243059,11242045,11238187,11238045,11237641,11237456,11236793,11236346,11235598,11233203,11228940,11227337,11222993,11222735,11222109,11221851,11217231,11216914,11215801,11215387,11214553,11214275,11213176,11211993,11211776,11208911,11208686,11204200,11204081,11202584,11202394,11201889,11200909,11200716,11200308,11199295	11262452,11253726,11252958,11252550,11252248,11251086,11248151,11245878,11245712,11243882,11243710,11243385,11243152,11242207,11238304,11238115,11237779,11237557,11236879,11236577,11235759,11233366,11229035,11227477,11223106,11222905,11222248,11222020,11217391,11217096,11215927,11215471,11214649,11214409,11213328,11212151,11211876,11209103,11208829,11204331,11204095,11202709,11202483,11202125,11201052,11200822,11200469,11199539	Gene ID= ENSG00000130158.13 TPM= 7.72 Transcript Type= protein_coding
chr19	11203619	11206402	11203619	11206402	+	transcript1950.chr19.nic@AC011472.1	transcript1950.chr19.nic	antisense_RNA	11203619,11205810	11203865,11206402	Gene ID= ENSG00000267082.1 TPM= 2.9 Transcript Type= NA
chr19	11322046	11339668	11322046	11339668	-	ENST00000222120.7@RAB3D	ENST00000222120.7	protein_coding	11339469,11337172,11335665,11335447,11322046	11339668,11337460,11335783,11335571,11325585	Gene ID= ENSG00000105514.7 TPM= 3.86 Transcript Type= protein_coding
chr19	11342776	11346305	11342776	11346305	-	ENST00000447337.5@TMEM205	ENST00000447337.5	protein_coding	11346008,11345520,11345252,11342776	11346305,11345628,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 8.72 Transcript Type= protein_coding
chr19	11342785	11346248	11342785	11346248	-	ENST00000588560.5@TMEM205	ENST00000588560.5	protein_coding	11346127,11345520,11345252,11342785	11346248,11345737,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 11.29 Transcript Type= protein_coding
chr19	11342776	11346300	11342776	11346300	-	ENST00000593256.6@TMEM205	ENST00000593256.6	protein_coding	11346127,11345520,11345252,11342776	11346300,11345628,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 28.02 Transcript Type= protein_coding
chr19	11342778	11346268	11342778	11346268	-	ENST00000586590.5@TMEM205	ENST00000586590.5	protein_coding	11346208,11345520,11345252,11342778	11346268,11345628,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 6.3 Transcript Type= protein_coding
chr19	11342779	11346271	11342779	11346271	-	ENST00000589555.5@TMEM205	ENST00000589555.5	protein_coding	11346208,11345520,11345252,11342779	11346271,11345737,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 4.54 Transcript Type= protein_coding
chr19	11342810	11346256	11342810	11346256	-	ENST00000588321.1@TMEM205	ENST00000588321.1	protein_coding	11345238,11342810	11346256,11343100	Gene ID= ENSG00000105518.13 TPM= 2.9 Transcript Type= retained_intron
chr19	11355386	11365698	11355386	11365698	+	ENST00000251473.9@PLPPR2	ENST00000251473.9	protein_coding	11355386,11356802,11357660,11359532,11359821,11361217,11362513,11363713,11364161,11364347	11355572,11356976,11357739,11359720,11359956,11361488,11362689,11363819,11364212,11365698	Gene ID= ENSG00000105520.10 TPM= 28.96 Transcript Type= protein_coding
chr19	11377205	11384312	11377205	11384312	-	ENST00000222139.10@EPOR	ENST00000222139.10	protein_coding	11384093,11383097,11381930,11381692,11381056,11380884,11378691,11377205	11384312,11383232,11382105,11381849,11381209,11380971,11378778,11378595	Gene ID= ENSG00000187266.13 TPM= 1.93 Transcript Type= protein_coding
chr19	11435628	11450968	11435628	11450968	+	transcript1976.chr19.nic@PRKCSH	transcript1976.chr19.nic	protein_coding	11435628,11436041,11436389,11437876,11438067,11441240,11442386,11445389,11446272,11447074,11447439,11447693,11448222,11448540,11448914,11449076,11449266,11450646	11435706,11436196,11436505,11437971,11438124,11441357,11442515,11445473,11446350,11447160,11447597,11447789,11448291,11448629,11448988,11449175,11449428,11450968	Gene ID= ENSG00000130175.9 TPM= 15.13 Transcript Type= NA
chr19	11435635	11450968	11435635	11450968	+	ENST00000592741.5@PRKCSH	ENST00000592741.5	protein_coding	11435635,11436041,11436389,11437876,11438067,11441240,11442386,11445389,11446272,11447074,11447439,11447693,11448222,11448540,11448914,11449076,11449266,11450646	11435710,11436196,11436505,11437971,11438124,11441357,11442515,11445473,11446350,11447160,11447618,11447789,11448291,11448629,11448988,11449175,11449428,11450968	Gene ID= ENSG00000130175.9 TPM= 10.3 Transcript Type= protein_coding
chr19	11483427	11505923	11483427	11505923	-	ENST00000293771.9@ZNF653	ENST00000293771.9	protein_coding	11505488,11498296,11495950,11487292,11486987,11486769,11485656,11484042,11483427	11505923,11498339,11496165,11487903,11487158,11486880,11485770,11484141,11483859	Gene ID= ENSG00000161914.9 TPM= 10.62 Transcript Type= protein_coding
chr19	11505916	11529174	11505916	11529174	-	ENST00000270517.11@ECSIT	ENST00000270517.11	protein_coding	11529062,11519075,11513804,11513056,11507991,11507702,11507457,11505916	11529174,11519193,11514221,11513279,11508048,11507850,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 212.05 Transcript Type= protein_coding
chr19	11505929	11529153	11505929	11529153	-	transcript1992.chr19.nic@ECSIT	transcript1992.chr19.nic	protein_coding	11529062,11513804,11513056,11507991,11507702,11507457,11505929	11529153,11514221,11513279,11508048,11507850,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 12.23 Transcript Type= NA
chr19	11505929	11529137	11505929	11529137	-	ENST00000252440.11@ECSIT	ENST00000252440.11	protein_coding	11529062,11519075,11513804,11513056,11507991,11507457,11505929	11529137,11519193,11514221,11513279,11508048,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 8.85 Transcript Type= protein_coding
chr19	11505929	11529096	11505929	11529096	-	ENST00000588998.5@ECSIT	ENST00000588998.5	protein_coding	11529062,11519075,11507991,11507457,11505929	11529096,11519193,11508048,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 6.92 Transcript Type= protein_coding
chr19	11538717	11550323	11538717	11550323	+	ENST00000252456.6@CNN1	ENST00000252456.6	protein_coding	11538717,11541076,11546675,11546832,11547797,11549323,11549550	11538990,11541197,11546741,11546969,11547907,11549469,11550323	Gene ID= ENSG00000130176.7 TPM= 1.93 Transcript Type= protein_coding
chr19	11553047	11559245	11553047	11559245	-	transcript2003.chr19.nnic@ELOF1	transcript2003.chr19.nnic	protein_coding	11559191,11555174,11554232,11554011,11553047	11559245,11555253,11554365,11554081,11553810	Gene ID= ENSG00000130165.10 TPM= 7.72 Transcript Type= NA
chr19	11553047	11559236	11553047	11559236	-	transcript2005.chr19.nnic@ELOF1	transcript2005.chr19.nnic	protein_coding	11559191,11555522,11554232,11554011,11553047	11559236,11555653,11554365,11554081,11553810	Gene ID= ENSG00000130165.10 TPM= 13.51 Transcript Type= NA
chr19	11553043	11559236	11553043	11559236	-	ENST00000252445.7@ELOF1	ENST00000252445.7	protein_coding	11559191,11554232,11554011,11553043	11559236,11554365,11554081,11553810	Gene ID= ENSG00000130165.10 TPM= 19.31 Transcript Type= protein_coding
chr19	11597420	11619135	11597420	11619135	+	ENST00000361113.9@ZNF627	ENST00000361113.9	protein_coding	11597420,11614527,11614827,11616695	11597630,11614653,11614887,11619135	Gene ID= ENSG00000198551.9 TPM= 16.41 Transcript Type= protein_coding
chr19	11721265	11738973	11721265	11738973	-	ENST00000341191.10@ZNF823	ENST00000341191.10	protein_coding	11738817,11725201,11724194,11721265	11738973,11725327,11724254,11723342	Gene ID= ENSG00000197933.12 TPM= 3.86 Transcript Type= protein_coding
chr19	11925068	11950763	11925068	11950763	+	ENST00000254321.9@ZNF700	ENST00000254321.9	protein_coding	11925068,11947181,11947514,11948276	11925273,11947307,11947574,11950763	Gene ID= ENSG00000196757.7 TPM= 1.93 Transcript Type= protein_coding
chr19	12014732	12035688	12014732	12035688	-	ENST00000419886.6@ZNF433	ENST00000419886.6	protein_coding	12035537,12034828,12018166,12017876,12014732	12035688,12034874,12018292,12017936,12016666	Gene ID= ENSG00000197647.11 TPM= 4.83 Transcript Type= protein_coding
chr19	12014758	12035710	12014758	12035710	-	ENST00000344980.10@ZNF433	ENST00000344980.10	protein_coding	12035537,12018166,12017876,12014758	12035710,12018301,12017936,12016666	Gene ID= ENSG00000197647.11 TPM= 1.93 Transcript Type= protein_coding
chr19	12163064	12189881	12163064	12189881	+	ENST00000343979.5@ZNF136	ENST00000343979.5	protein_coding	12163064,12185785,12186114,12186570	12163206,12185911,12186174,12189881	Gene ID= ENSG00000196646.11 TPM= 3.86 Transcript Type= protein_coding
chr19	12272163	12294853	12272163	12294853	-	transcript2044.chr19.nnic@ZNF44	transcript2044.chr19.nnic	protein_coding	12294692,12275956,12274966,12272163	12294853,12276082,12275033,12274063	Gene ID= ENSG00000197857.13 TPM= 1.93 Transcript Type= NA
chr19	12390016	12401271	12390016	12401271	-	ENST00000430385.3@ZNF799	ENST00000430385.3	protein_coding	12401068,12393297,12392603,12390016	12401271,12393423,12392663,12392206	Gene ID= ENSG00000196466.10 TPM= 4.83 Transcript Type= protein_coding
chr19	12610918	12631921	12610918	12631921	+	ENST00000343325.8@ZNF791	ENST00000343325.8	protein_coding	12610918,12623700,12624650,12627721	12611082,12623826,12624710,12631921	Gene ID= ENSG00000173875.13 TPM= 3.86 Transcript Type= protein_coding
chr19	12646513	12666742	12646513	12666742	-	ENST00000456935.6@MAN2B1	ENST00000456935.6	protein_coding	12666543,12665703,12665352,12664792,12663703,12663317,12661260,12658428,12658224,12658063,12657446,12656949,12656571,12655694,12652363,12652153,12650104,12649913,12649341,12649136,12648175,12647443,12647233,12646513	12666742,12665805,12665525,12664985,12663835,12663462,12661376,12658510,12658344,12658141,12657555,12657056,12656687,12655879,12652460,12652270,12650222,12650014,12649428,12649216,12648402,12647598,12647335,12646732	Gene ID= ENSG00000104774.12 TPM= 20.27 Transcript Type= protein_coding
chr19	12666800	12675832	12666800	12675832	+	ENST00000418543.7@WDR83	ENST00000418543.7	protein_coding	12666800,12668508,12669755,12669977,12670180,12670563,12670695,12672847,12673008,12673202,12675523	12666992,12668627,12669893,12670097,12670285,12670611,12670821,12672914,12673116,12673316,12675832	Gene ID= ENSG00000123154.11 TPM= 1.93 Transcript Type= protein_coding
chr19	12666807	12675832	12666807	12675832	+	transcript2073.chr19.nic@WDR83	transcript2073.chr19.nic	protein_coding	12666807,12668508,12669755,12669977,12670180,12672847,12673008,12673202,12675523	12666992,12668627,12669893,12670097,12670285,12672914,12673116,12673316,12675832	Gene ID= ENSG00000123154.11 TPM= 1.93 Transcript Type= NA
chr19	12668071	12671356	12668071	12671356	-	ENST00000596731.5@WDR83OS	ENST00000596731.5	protein_coding	12669354,12669128,12668520,12668071	12671356,12669233,12668617,12668425	Gene ID= ENSG00000105583.9 TPM= 109.08 Transcript Type= protein_coding
chr19	12668071	12669418	12668071	12669418	-	transcript2096.chr19.nnic@WDR83OS	transcript2096.chr19.nnic	protein_coding	12669354,12668520,12668071	12669418,12668617,12668425	Gene ID= ENSG00000105583.9 TPM= 3.86 Transcript Type= NA
chr19	12675721	12681902	12675721	12681902	-	ENST00000210060.11@DHPS	ENST00000210060.11	protein_coding	12681560,12680161,12679801,12679623,12679457,12677291,12677108,12676017,12675721	12681902,12680325,12679922,12679719,12679543,12677396,12677211,12676142,12675933	Gene ID= ENSG00000095059.15 TPM= 118.15 Transcript Type= protein_coding
chr19	12675717	12681900	12675717	12681900	-	transcript2090.chr19.nic@DHPS	transcript2090.chr19.nic	protein_coding	12681560,12680161,12679801,12679623,12679457,12676017,12675717	12681900,12680325,12679922,12679719,12679543,12677396,12675933	Gene ID= ENSG00000095059.15 TPM= 6.42 Transcript Type= NA
chr19	12675762	12681860	12675762	12681860	-	ENST00000601537.5@DHPS	ENST00000601537.5	protein_coding	12681560,12680161,12679801,12679623,12679457,12677291,12676017,12675762	12681860,12680325,12679922,12679719,12679543,12677396,12676142,12675933	Gene ID= ENSG00000095059.15 TPM= 12.55 Transcript Type= nonsense_mediated_decay
chr19	12688917	12696643	12688917	12696643	-	ENST00000393261.7@FBXW9	ENST00000393261.7	protein_coding	12696173,12694799,12694594,12691342,12691166,12689962,12689761,12689541,12689372,12688917	12696643,12694938,12694722,12691454,12691257,12690110,12689874,12689630,12689437,12689290	Gene ID= ENSG00000132004.12 TPM= 12.55 Transcript Type= protein_coding
chr19	12730640	12734775	12730640	12734775	-	ENST00000242784.4@TRIR	ENST00000242784.4	protein_coding	12734313,12731344,12730640	12734775,12731421,12731068	Gene ID= ENSG00000123144.10 TPM= 179.55 Transcript Type= protein_coding
chr19	12730640	12734657	12730640	12734657	-	ENST00000591254.1@TRIR	ENST00000591254.1	protein_coding	12734313,12731344,12730640	12734657,12731557,12731068	Gene ID= ENSG00000123144.10 TPM= 23.17 Transcript Type= nonsense_mediated_decay
chr19	12733082	12734684	12733082	12734684	-	transcript2107.chr19.nnic@NA	transcript2107.chr19.nnic	NA	12733082	12734684	Gene ID= novel_gene_chr19_2108 TPM= 3.86 Transcript Type= NA
chr19	12737139	12748323	12737139	12748323	+	ENST00000591090.5@ASNA1	ENST00000591090.5	protein_coding	12737139,12737459,12738511,12745377,12745609,12747197,12747395,12747973	12737193,12737666,12738658,12745525,12745759,12747304,12747592,12748323	Gene ID= ENSG00000198356.11 TPM= 56.95 Transcript Type= protein_coding
chr19	12763003	12778449	12763003	12778449	-	transcript2110.chr19.nic@HOOK2	transcript2110.chr19.nic	protein_coding	12778300,12774812,12774635,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763003	12778449,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431	Gene ID= ENSG00000095066.11 TPM= 4.1 Transcript Type= NA
chr19	12763003	12775543	12763003	12775543	-	transcript2111.chr19.nnic@HOOK2	transcript2111.chr19.nnic	protein_coding	12775219,12774812,12774669,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763003	12775543,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431	Gene ID= ENSG00000095066.11 TPM= 3.14 Transcript Type= NA
chr19	12763004	12775620	12763004	12775620	-	ENST00000264827.9@HOOK2	ENST00000264827.9	protein_coding	12775405,12774812,12774669,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763004	12775620,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431	Gene ID= ENSG00000095066.11 TPM= 72.64 Transcript Type= protein_coding
chr19	12763003	12772550	12763003	12772550	-	transcript2116.chr19.nic@HOOK2	transcript2116.chr19.nic	protein_coding	12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763003	12772550,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431	Gene ID= ENSG00000095066.11 TPM= 8.93 Transcript Type= NA
chr19	12774078	12775544	12774078	12775544	-	ENST00000589134.5@HOOK2	ENST00000589134.5	protein_coding	12775405,12774812,12774078	12775544,12774897,12774741	Gene ID= ENSG00000095066.11 TPM= 2.9 Transcript Type= retained_intron
chr19	12791496	12793315	12791496	12793315	+	ENST00000302754.5@JUNB	ENST00000302754.5	protein_coding	12791496	12793315	Gene ID= ENSG00000171223.5 TPM= 141.9 Transcript Type= protein_coding
chr19	12796820	12801859	12796820	12801859	-	ENST00000301522.2@PRDX2	ENST00000301522.2	protein_coding	12801740,12801159,12800916,12800177,12799859,12796820	12801859,12801270,12801069,12800299,12799989,12797166	Gene ID= ENSG00000167815.11 TPM= 630.83 Transcript Type= protein_coding
chr19	12796820	12801787	12796820	12801787	-	ENST00000334482.9@PRDX2	ENST00000334482.9	protein_coding	12801740,12801159,12800916,12800177,12796820	12801787,12801270,12801069,12800299,12797166	Gene ID= ENSG00000167815.11 TPM= 8.21 Transcript Type= protein_coding
chr19	12875211	12881468	12875211	12881468	-	ENST00000222219.7@DNASE2	ENST00000222219.7	protein_coding	12881290,12880972,12880802,12878670,12878382,12875211	12881468,12881152,12880880,12878834,12878579,12876363	Gene ID= ENSG00000105612.8 TPM= 3.86 Transcript Type= protein_coding
chr19	12891026	12899969	12891026	12899969	+	ENST00000222214.9@GCDH	ENST00000222214.9	protein_coding	12891026,12891271,12891487,12891831,12892116,12893483,12895992,12896205,12896910,12897303,12897703,12899468	12891202,12891395,12891522,12891974,12892178,12893653,12896121,12896421,12897013,12897428,12897863,12899969	Gene ID= ENSG00000105607.12 TPM= 22.2 Transcript Type= protein_coding
chr19	12922479	12933729	12922479	12933729	-	transcript2147.chr19.nic@FARSA	transcript2147.chr19.nic	protein_coding	12933550,12930612,12930429,12930223,12928755,12928535,12928342,12924904,12924639,12924449,12924151,12922479	12933729,12930749,12930527,12930341,12928847,12928663,12928457,12925174,12924807,12924526,12924265,12922886	Gene ID= ENSG00000179115.10 TPM= 10.62 Transcript Type= NA
chr19	12922480	12933715	12922480	12933715	-	ENST00000314606.8@FARSA	ENST00000314606.8	protein_coding	12933550,12930612,12930429,12930223,12928755,12928535,12928342,12925090,12924904,12924639,12924449,12924151,12922480	12933715,12930749,12930527,12930341,12928847,12928663,12928457,12925174,12925003,12924807,12924526,12924265,12922886	Gene ID= ENSG00000179115.10 TPM= 112.94 Transcript Type= protein_coding
chr19	12922480	12933714	12922480	12933714	-	ENST00000423140.6@FARSA	ENST00000423140.6	protein_coding	12933550,12930612,12930429,12930223,12928535,12928342,12925090,12924904,12924639,12924449,12924151,12922480	12933714,12930749,12930527,12930341,12928663,12928457,12925174,12925003,12924807,12924526,12924265,12922886	Gene ID= ENSG00000179115.10 TPM= 16.41 Transcript Type= protein_coding
chr19	12938607	12944489	12938607	12944489	+	ENST00000316448.9@CALR	ENST00000316448.9	protein_coding	12938607,12939134,12939428,12940053,12940243,12940541,12940744,12943537,12943713	12938770,12939235,12939631,12940147,12940452,12940654,12940887,12943629,12944489	Gene ID= ENSG00000179218.13 TPM= 134.66 Transcript Type= protein_coding
chr19	12948689	12953405	12948689	12953405	+	ENST00000586375.1@RAD23A	ENST00000586375.1	protein_coding	12948689,12949275,12952689,12952936	12948813,12949408,12952853,12953405	Gene ID= ENSG00000179262.9 TPM= 8.69 Transcript Type= nonsense_mediated_decay
chr19	12945888	12953642	12945888	12953642	+	ENST00000586534.5@RAD23A	ENST00000586534.5	protein_coding	12945888,12947848,12948177,12948497,12948686,12949081,12949275,12952689,12952936	12946020,12948009,12948358,12948552,12948813,12949159,12949408,12952853,12953642	Gene ID= ENSG00000179262.9 TPM= 73.2 Transcript Type= protein_coding
chr19	12945876	12953623	12945876	12953623	+	ENST00000316856.7@RAD23A	ENST00000316856.7	protein_coding	12945876,12947848,12948177,12948497,12948686,12949081,12949278,12952689,12952936	12946020,12948009,12948358,12948552,12948813,12949159,12949408,12952853,12953623	Gene ID= ENSG00000179262.9 TPM= 207.95 Transcript Type= protein_coding
chr19	12945894	12953613	12945894	12953613	+	ENST00000593114.5@RAD23A	ENST00000593114.5	protein_coding	12945894,12947848,12948177,12948514,12948686,12949081,12949278,12952689,12952936	12946020,12948009,12948358,12948552,12948813,12949159,12949408,12952853,12953613	Gene ID= ENSG00000179262.9 TPM= 2.49 Transcript Type= nonsense_mediated_decay
chr19	12953119	12957236	12953119	12957236	-	ENST00000316939.2@GADD45GIP1	ENST00000316939.2	protein_coding	12956863,12953119	12957236,12954526	Gene ID= ENSG00000179271.2 TPM= 130.32 Transcript Type= protein_coding
chr19	12995475	13094755	12995475	13094755	+	transcript2210.chr19.nic@NFIX	transcript2210.chr19.nic	protein_coding	12995475,13025021,13073047,13073422,13073906,13075535,13081680,13090299,13094635	12995864,13025552,13073109,13073496,13074026,13075671,13081855,13090390,13094755	Gene ID= ENSG00000008441.16 TPM= 14 Transcript Type= NA
chr19	13013642	13014646	13013642	13014646	-	transcript2213.chr19.nnic@AC138474.1	transcript2213.chr19.nnic	antisense_RNA	13014206,13013642	13014646,13013981	Gene ID= ENSG00000267417.1 TPM= 1.93 Transcript Type= NA
chr19	13013888	13014646	13013888	13014646	-	transcript2215.chr19.nnic@AC138474.1	transcript2215.chr19.nnic	antisense_RNA	13014206,13013888	13014646,13013981	Gene ID= ENSG00000267417.1 TPM= 3.86 Transcript Type= NA
chr19	13094910	13097066	13094910	13097066	+	transcript2216.chr19.nnic@NA	transcript2216.chr19.nnic	NA	13094910	13097066	Gene ID= novel_gene_chr19_2217 TPM= 8.69 Transcript Type= NA
chr19	13099033	13102723	13099033	13102723	-	transcript2222.chr19.nic@LYL1	transcript2222.chr19.nic	protein_coding	13102531,13100837,13100657,13099033	13102723,13101048,13100748,13099734	Gene ID= ENSG00000104903.4 TPM= 2.41 Transcript Type= NA
chr19	13099033	13102867	13099033	13102867	-	ENST00000264824.4@LYL1	ENST00000264824.4	protein_coding	13102531,13100837,13100657,13099033	13102867,13101195,13100748,13099734	Gene ID= ENSG00000104903.4 TPM= 6.27 Transcript Type= protein_coding
chr19	13104907	13117567	13104907	13117567	-	ENST00000592062.5@TRMT1	ENST00000592062.5	protein_coding	13117489,13116653,13116146,13115997,13115626,13115279,13112896,13112705,13110158,13109915,13109769,13109550,13109381,13107751,13107574,13105487,13105267,13104907	13117567,13117112,13116431,13116052,13115768,13115466,13113011,13112817,13110306,13110001,13109838,13109684,13109466,13107859,13107650,13105606,13105396,13105081	Gene ID= ENSG00000104907.12 TPM= 23 Transcript Type= protein_coding
chr19	13104907	13116770	13104907	13116770	-	transcript2228.chr19.nic@TRMT1	transcript2228.chr19.nic	protein_coding	13116653,13116146,13115997,13115626,13115279,13112896,13112705,13110158,13109769,13109550,13109381,13107751,13107574,13105487,13105267,13104907	13116770,13116431,13116052,13115768,13115466,13113011,13112817,13110306,13109838,13109684,13109466,13107859,13107650,13105606,13105396,13105081	Gene ID= ENSG00000104907.12 TPM= 13.35 Transcript Type= NA
chr19	13104907	13116740	13104907	13116740	-	ENST00000593157.5@TRMT1	ENST00000593157.5	protein_coding	13116653,13116146,13115997,13115626,13115279,13112896,13112705,13110158,13109915,13109769,13109550,13109381,13107751,13107574,13105267,13104907	13116740,13116340,13116052,13115768,13115466,13113011,13112817,13110306,13110001,13109838,13109684,13109466,13107859,13107650,13105606,13105081	Gene ID= ENSG00000104907.12 TPM= 4.18 Transcript Type= retained_intron
chr19	13104907	13116770	13104907	13116770	-	transcript2231.chr19.nic@TRMT1	transcript2231.chr19.nic	protein_coding	13116653,13116146,13115997,13115626,13115279,13112896,13112705,13110158,13109915,13109769,13109550,13109381,13107751,13107574,13105267,13104907	13116770,13116431,13116052,13115768,13115466,13113011,13112817,13110306,13110001,13109838,13109684,13109466,13107859,13107650,13105606,13105081	Gene ID= ENSG00000104907.12 TPM= 4.18 Transcript Type= NA
chr19	13104907	13116770	13104907	13116770	-	transcript2235.chr19.nic@TRMT1	transcript2235.chr19.nic	protein_coding	13116653,13116146,13115997,13115626,13115279,13112896,13112705,13110158,13109769,13109550,13109381,13107751,13107574,13105267,13104907	13116770,13116431,13116052,13115768,13115466,13113011,13112817,13110306,13109838,13109684,13109466,13107859,13107650,13105606,13105081	Gene ID= ENSG00000104907.12 TPM= 6.59 Transcript Type= NA
chr19	13104902	13116749	13104902	13116749	-	ENST00000357720.8@TRMT1	ENST00000357720.8	protein_coding	13116653,13116146,13115997,13115626,13115279,13112896,13112705,13110158,13109915,13109769,13109550,13109381,13107751,13107574,13105487,13105267,13104902	13116749,13116431,13116052,13115768,13115466,13113011,13112817,13110306,13110001,13109838,13109684,13109466,13107859,13107650,13105606,13105396,13105081	Gene ID= ENSG00000104907.12 TPM= 5.63 Transcript Type= protein_coding
chr19	13118337	13141141	13118337	13141141	+	ENST00000292431.4@NACC1	ENST00000292431.4	protein_coding	13118337,13135200,13136232,13137271,13137478,13138147	13118454,13136153,13136405,13137376,13137575,13141141	Gene ID= ENSG00000160877.5 TPM= 29.92 Transcript Type= protein_coding
chr19	13144062	13150381	13144062	13150381	-	transcript2245.chr19.nic@STX10	transcript2245.chr19.nic	protein_coding	13149728,13149499,13149029,13145288,13144764,13144577,13144062	13150381,13149593,13149091,13145395,13144870,13144671,13144486	Gene ID= ENSG00000104915.14 TPM= 12.55 Transcript Type= NA
chr19	13144089	13150238	13144089	13150238	-	ENST00000587230.5@STX10	ENST00000587230.5	protein_coding	13150139,13149728,13149499,13149029,13145288,13144764,13144577,13144089	13150238,13149897,13149593,13149091,13145395,13144870,13144671,13144486	Gene ID= ENSG00000104915.14 TPM= 16.41 Transcript Type= protein_coding
chr19	13151509	13154899	13151509	13154899	+	transcript2251.chr19.nnic@NA	transcript2251.chr19.nnic	NA	13151509	13154899	Gene ID= novel_gene_chr19_2252 TPM= 46.33 Transcript Type= NA
chr19	13747850	13763292	13747850	13763292	+	transcript2256.chr19.nic@CCDC130	transcript2256.chr19.nic	protein_coding	13747850,13751608,13754289,13756197,13757418,13757786,13758868,13759100,13761491,13762299,13762590	13747954,13751811,13754342,13756279,13757473,13757846,13759010,13759272,13761568,13762437,13763292	Gene ID= ENSG00000104957.13 TPM= 3.38 Transcript Type= NA
chr19	13747779	13763292	13747779	13763292	+	ENST00000221554.12@CCDC130	ENST00000221554.12	protein_coding	13747779,13751608,13754289,13756197,13757418,13757786,13758868,13759100,13762299,13762590	13747954,13751811,13754342,13756279,13757473,13757846,13759010,13759272,13762437,13763292	Gene ID= ENSG00000104957.13 TPM= 15.93 Transcript Type= protein_coding
chr19	13764549	13772866	13764549	13772866	+	ENST00000040663.7@MRI1	ENST00000040663.7	protein_coding	13764549,13764871,13765954,13768561,13768824,13772121	13764720,13765109,13766129,13768737,13769048,13772866	Gene ID= ENSG00000037757.13 TPM= 1.93 Transcript Type= protein_coding
chr19	13774168	13778461	13774168	13778461	+	ENST00000588234.5@C19orf53	ENST00000588234.5	protein_coding	13774168,13774652,13778052	13774574,13774707,13778461	Gene ID= ENSG00000104979.8 TPM= 156.38 Transcript Type= protein_coding
chr19	13795460	13832230	13795460	13832230	+	ENST00000254323.6@ZSWIM4	ENST00000254323.6	protein_coding	13795460,13799720,13804792,13808836,13809070,13812997,13817216,13817722,13819357,13823346,13825550,13828645,13830191	13795801,13799921,13805148,13808984,13809220,13813164,13817353,13817976,13819492,13823500,13825713,13828726,13832230	Gene ID= ENSG00000132003.9 TPM= 1.93 Transcript Type= protein_coding
chr19	13834517	13842919	13834517	13842919	-	transcript2275.chr19.nnic@AC020916.1	transcript2275.chr19.nnic	lincRNA	13842776,13834517	13842919,13836706	Gene ID= ENSG00000267519.5 TPM= 1.93 Transcript Type= NA
chr19	13834516	13836289	13834516	13836289	-	ENST00000587762.1@AC020916.1	ENST00000587762.1	lincRNA	13834516	13836289	Gene ID= ENSG00000267519.5 TPM= 12.55 Transcript Type= lincRNA
chr19	13839815	13840939	13839815	13840939	+	transcript2276.chr19.nnic@NA	transcript2276.chr19.nnic	NA	13839815	13840939	Gene ID= novel_gene_chr19_2277 TPM= 10.62 Transcript Type= NA
chr19	13906201	13930879	13906201	13930879	+	ENST00000318003.11@CC2D1A	ENST00000318003.11	protein_coding	13906201,13909823,13912323,13912528,13913168,13913404,13918070,13918504,13918746,13918912,13919130,13919818,13920557,13920750,13923333,13923548,13923695,13926517,13926667,13926821,13926978,13927175,13927893,13928124,13929379,13929534,13930078,13930242,13930375	13906501,13909958,13912438,13912593,13913302,13913638,13918194,13918576,13918817,13919042,13919202,13919951,13920668,13920922,13923455,13923606,13923811,13926590,13926725,13926872,13927077,13927265,13928030,13928188,13929442,13929660,13930154,13930289,13930879	Gene ID= ENSG00000132024.17 TPM= 28.96 Transcript Type= protein_coding
chr19	13952459	13961449	13952459	13961449	+	transcript2285.chr19.nic@DCAF15	transcript2285.chr19.nic	protein_coding	13952459,13954340,13954526,13955912,13956123,13956352,13959045,13959582,13959767,13959984,13960287,13960940	13952644,13954437,13954661,13956018,13956262,13956522,13959479,13959673,13959895,13960069,13960580,13961449	Gene ID= ENSG00000132017.10 TPM= 2.25 Transcript Type= NA
chr19	13952459	13961449	13952459	13961449	+	transcript2286.chr19.nnic@DCAF15	transcript2286.chr19.nnic	protein_coding	13952459,13954340,13954526,13955912,13956123,13956352,13959045,13959582,13959767,13959984,13960465,13960940	13952644,13954437,13954661,13956018,13956262,13956522,13959479,13959673,13959895,13960069,13960580,13961449	Gene ID= ENSG00000132017.10 TPM= 3.21 Transcript Type= NA
chr19	13952492	13961449	13952492	13961449	+	ENST00000254337.10@DCAF15	ENST00000254337.10	protein_coding	13952492,13954340,13954526,13955912,13956123,13956352,13959045,13959582,13959767,13959984,13960287,13960465,13960940	13952644,13954437,13954661,13956018,13956262,13956522,13959479,13959673,13959895,13960069,13960391,13960580,13961449	Gene ID= ENSG00000132017.10 TPM= 17.69 Transcript Type= protein_coding
chr19	14031748	14053216	14031748	14053216	+	ENST00000263379.3@IL27RA	ENST00000263379.3	protein_coding	14031748,14032386,14039508,14039753,14042453,14042716,14046154,14046430,14048981,14049156,14050758,14051607,14051880,14052096	14031972,14032503,14039665,14039910,14042612,14042789,14046337,14046618,14049082,14049314,14050883,14051700,14051973,14053216	Gene ID= ENSG00000104998.3 TPM= 1.93 Transcript Type= protein_coding
chr19	14071483	14073768	14071483	14073768	-	transcript2310.chr19.nnic@NA	transcript2310.chr19.nnic	NA	14071483	14073768	Gene ID= novel_gene_chr19_2311 TPM= 1.93 Transcript Type= NA
chr19	14087840	14090824	14087840	14090824	-	transcript2301.chr19.nnic@SAMD1	transcript2301.chr19.nnic	protein_coding	14090708,14089785,14089068,14088880,14088671,14087840	14090824,14090575,14089362,14088976,14088782,14088575	Gene ID= ENSG00000141858.11 TPM= 44.09 Transcript Type= NA
chr19	14087840	14091011	14087840	14091011	-	transcript2302.chr19.nic@SAMD1	transcript2302.chr19.nic	protein_coding	14090938,14089785,14089068,14088880,14088671,14087840	14091011,14090575,14089362,14088976,14088782,14088575	Gene ID= ENSG00000141858.11 TPM= 44.09 Transcript Type= NA
chr19	14091688	14117762	14091688	14117762	-	transcript2293.chr19.nnic@PRKACA	transcript2293.chr19.nnic	protein_coding	14117502,14107348,14106760,14102816,14100826,14097764,14097579,14097361,14093628,14093207,14091688	14117762,14107409,14106888,14102914,14100908,14097890,14097674,14097483,14093792,14093237,14091811	Gene ID= ENSG00000072062.13 TPM= 103.77 Transcript Type= NA
chr19	14097248	14117762	14097248	14117762	-	transcript2295.chr19.nic@PRKACA	transcript2295.chr19.nic	protein_coding	14117502,14107348,14106760,14102816,14100826,14097764,14097579,14097248	14117762,14107409,14106888,14102914,14100908,14097890,14097674,14097483	Gene ID= ENSG00000072062.13 TPM= 2.41 Transcript Type= NA
chr19	14381489	14408725	14381489	14408725	+	transcript2318.chr19.nnic@ADGRE5	transcript2318.chr19.nnic	protein_coding	14381489,14388450,14388702,14390924,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406382,14406700,14406869,14407061,14407908,14408092	14381545,14388500,14388818,14391079,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405912,14406557,14406766,14406960,14407229,14408009,14408725	Gene ID= ENSG00000123146.19 TPM= 4.83 Transcript Type= NA
chr19	14381490	14408721	14381490	14408721	+	transcript2322.chr19.nnic@ADGRE5	transcript2322.chr19.nnic	protein_coding	14381490,14388450,14388702,14390924,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406382,14406700,14406869,14407061,14407908	14381545,14388500,14388818,14391079,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405912,14406557,14406766,14406960,14407229,14408721	Gene ID= ENSG00000123146.19 TPM= 2.9 Transcript Type= NA
chr19	14381444	14408721	14381444	14408721	+	ENST00000242786.5@ADGRE5	ENST00000242786.5	protein_coding	14381444,14388450,14388702,14390924,14396342,14397077,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406331,14406700,14406869,14407061,14407908,14408092	14381545,14388500,14388818,14391079,14396473,14397223,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405939,14406557,14406766,14406960,14407229,14408009,14408721	Gene ID= ENSG00000123146.19 TPM= 16.41 Transcript Type= protein_coding
chr19	14381435	14408725	14381435	14408725	+	ENST00000357355.7@ADGRE5	ENST00000357355.7	protein_coding	14381435,14388450,14388702,14390924,14396342,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406331,14406700,14406869,14407061,14407908,14408092	14381545,14388500,14388818,14391079,14396473,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405939,14406557,14406766,14406960,14407229,14408009,14408725	Gene ID= ENSG00000123146.19 TPM= 28.96 Transcript Type= protein_coding
chr19	14408819	14419372	14408819	14419372	-	transcript2330.chr19.nic@DDX39A	transcript2330.chr19.nic	protein_coding	14419270,14413013,14412551,14411506,14410989,14410548,14409742,14409536,14409303,14409037,14408819	14419372,14413224,14412678,14411598,14411172,14410605,14410334,14409645,14409447,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 4.1 Transcript Type= NA
chr19	14408819	14419372	14408819	14419372	-	transcript2336.chr19.nic@DDX39A	transcript2336.chr19.nic	protein_coding	14419270,14413013,14412551,14411506,14410989,14410216,14409742,14409303,14409037,14408819	14419372,14413224,14412678,14411598,14411172,14410334,14409873,14409645,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 5.07 Transcript Type= NA
chr19	14408851	14419367	14408851	14419367	-	ENST00000242776.8@DDX39A	ENST00000242776.8	protein_coding	14419270,14413013,14412551,14411506,14410989,14410216,14409742,14409536,14409303,14409037,14408851	14419367,14413224,14412678,14411598,14411172,14410334,14409873,14409645,14409447,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 53.33 Transcript Type= protein_coding
chr19	14408819	14419337	14408819	14419337	-	ENST00000589318.5@DDX39A	ENST00000589318.5	protein_coding	14419270,14413013,14412551,14411506,14410989,14409742,14409303,14409037,14408819	14419337,14413224,14412678,14411598,14411172,14410334,14409645,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 2.17 Transcript Type= retained_intron
chr19	14433323	14471859	14433323	14471859	+	transcript2345.chr19.nic@PKN1	transcript2345.chr19.nic	protein_coding	14433323,14434590,14441143,14443470,14446426,14450318,14450896,14451829,14458031,14458232,14463667,14463828,14464060,14467565,14467718,14467876,14469341,14469752,14469912,14470163,14470575,14470771,14471581	14433542,14434654,14441443,14443621,14446561,14450463,14451109,14452023,14458140,14458375,14463742,14463969,14464153,14467641,14467793,14467967,14469517,14469814,14469988,14470305,14470682,14470851,14471859	Gene ID= ENSG00000123143.12 TPM= 6.59 Transcript Type= NA
chr19	14440260	14471866	14440260	14471866	+	ENST00000342216.8@PKN1	ENST00000342216.8	protein_coding	14440260,14441143,14443470,14446426,14450318,14450896,14451829,14458031,14458232,14463667,14463828,14464060,14467565,14467718,14467876,14469341,14469752,14469912,14470163,14470575,14470771,14471581	14440329,14441443,14443621,14446561,14450463,14451109,14452023,14458140,14458375,14463742,14463969,14464153,14467641,14467793,14467967,14469517,14469814,14469988,14470305,14470682,14470851,14471866	Gene ID= ENSG00000123143.12 TPM= 7.08 Transcript Type= protein_coding
chr19	14433357	14471859	14433357	14471859	+	ENST00000242783.10@PKN1	ENST00000242783.10	protein_coding	14433357,14441143,14443470,14446426,14450318,14450896,14451829,14458031,14458232,14463667,14463828,14464060,14467565,14467718,14467876,14469341,14469752,14469912,14470163,14470575,14470771,14471581	14433542,14441443,14443621,14446561,14450463,14451109,14452023,14458140,14458375,14463742,14463969,14464153,14467641,14467793,14467967,14469517,14469814,14469988,14470305,14470682,14470851,14471859	Gene ID= ENSG00000123143.12 TPM= 167.8 Transcript Type= protein_coding
chr19	14433323	14471867	14433323	14471867	+	ENST00000585839.5@PKN1	ENST00000585839.5	protein_coding	14433323,14441143,14443470,14446426,14450318,14450896,14451829,14458031,14458232,14463667,14463828,14464060,14467565,14467876,14469341,14470163,14470575,14470771,14471581	14433542,14441443,14443621,14446561,14450463,14451109,14452023,14458140,14458375,14463742,14463969,14464153,14467793,14467967,14469988,14470305,14470682,14470851,14471867	Gene ID= ENSG00000123143.12 TPM= 5.79 Transcript Type= retained_intron
chr19	14477762	14496157	14477762	14496157	-	transcript2363.chr19.nnic@GIPC1	transcript2363.chr19.nnic	protein_coding	14496037,14492857,14482689,14480593,14480305,14479412,14478684,14477762	14496157,14492912,14483006,14480778,14480485,14479524,14478765,14478567	Gene ID= ENSG00000123159.15 TPM= 4.68 Transcript Type= NA
chr19	14477762	14496157	14477762	14496157	-	transcript2364.chr19.nic@GIPC1	transcript2364.chr19.nic	protein_coding	14496037,14492857,14491656,14480593,14480305,14479412,14478684,14477762	14496157,14492912,14491743,14480778,14480485,14479524,14478765,14478567	Gene ID= ENSG00000123159.15 TPM= 4.44 Transcript Type= NA
chr19	14477762	14496132	14477762	14496132	-	ENST00000393033.8@GIPC1	ENST00000393033.8	protein_coding	14496037,14492857,14491656,14482689,14480593,14480305,14479412,14478684,14477762	14496132,14492912,14491743,14483006,14480778,14480485,14479524,14478765,14478567	Gene ID= ENSG00000123159.15 TPM= 84.8 Transcript Type= protein_coding
chr19	14477762	14496132	14477762	14496132	-	ENST00000345425.6@GIPC1	ENST00000345425.6	protein_coding	14496037,14482689,14480593,14480305,14479412,14478684,14477762	14496132,14483006,14480778,14480485,14479524,14478765,14478567	Gene ID= ENSG00000123159.15 TPM= 2.75 Transcript Type= protein_coding
chr19	14514770	14518420	14514770	14518420	-	ENST00000254322.2@DNAJB1	ENST00000254322.2	protein_coding	14518139,14516466,14514770	14518420,14517046,14516170	Gene ID= ENSG00000132002.7 TPM= 313.73 Transcript Type= protein_coding
chr19	14529595	14565977	14529595	14565977	+	ENST00000598987.5@TECR	ENST00000598987.5	protein_coding	14529595,14545114,14562525,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14529711,14545180,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565977	Gene ID= ENSG00000099797.13 TPM= 23.26 Transcript Type= nonsense_mediated_decay
chr19	14529560	14565978	14529560	14565978	+	ENST00000215567.9@TECR	ENST00000215567.9	protein_coding	14529560,14562525,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14529711,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565978	Gene ID= ENSG00000099797.13 TPM= 30.26 Transcript Type= protein_coding
chr19	14562192	14565980	14562192	14565980	+	transcript2385.chr19.nic@TECR	transcript2385.chr19.nic	protein_coding	14562192,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565980	Gene ID= ENSG00000099797.13 TPM= 153.18 Transcript Type= NA
chr19	14566078	14572062	14566078	14572062	-	ENST00000593353.5@NDUFB7	ENST00000593353.5	protein_coding	14571889,14566765,14566078	14572062,14566931,14566265	Gene ID= ENSG00000099795.6 TPM= 194.99 Transcript Type= nonsense_mediated_decay
chr19	14690049	14706552	14690049	14706552	+	transcript2403.chr19.nic@ZNF333	transcript2403.chr19.nic	protein_coding	14690049,14693451,14695010,14695566,14699199,14705054,14706091	14690150,14693494,14695133,14695661,14699281,14705170,14706552	Gene ID= ENSG00000160961.11 TPM= 2.9 Transcript Type= NA
chr19	15107403	15114988	15107403	15114988	+	ENST00000342784.6@SYDE1	ENST00000342784.6	protein_coding	15107403,15109056,15109704,15110521,15111313,15111632,15112346,15113560	15107521,15109397,15110348,15110735,15111439,15111792,15112571,15114988	Gene ID= ENSG00000105137.12 TPM= 3.86 Transcript Type= protein_coding
chr19	15114987	15125675	15114987	15125675	-	transcript2408.chr19.nic@ILVBL	transcript2408.chr19.nic	protein_coding	15125380,15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114987	15125675,15125069,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430	Gene ID= ENSG00000105135.15 TPM= 10.62 Transcript Type= NA
chr19	15114987	15125785	15114987	15125785	-	ENST00000263383.7@ILVBL	ENST00000263383.7	protein_coding	15125656,15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114987	15125785,15125069,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430	Gene ID= ENSG00000105135.15 TPM= 32.82 Transcript Type= protein_coding
chr19	15115016	15125722	15115016	15125722	-	ENST00000534378.5@ILVBL	ENST00000534378.5	protein_coding	15125656,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15115016	15125722,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430	Gene ID= ENSG00000105135.15 TPM= 1.93 Transcript Type= protein_coding
chr19	15249225	15332539	15249225	15332539	-	transcript2424.chr19.nnic@BRD4	transcript2424.chr19.nnic	protein_coding	15332290,15272815,15268905,15267416,15265354,15264404,15263420,15256964,15256062,15255297,15254152,15249225	15332539,15273133,15269042,15267551,15265643,15264766,15263548,15257173,15256263,15255592,15254262,15249290	Gene ID= ENSG00000141867.17 TPM= 14.96 Transcript Type= NA
chr19	15256099	15331906	15256099	15331906	-	ENST00000594841.5@BRD4	ENST00000594841.5	protein_coding	15331836,15272815,15268905,15267416,15265354,15264404,15263420,15256964,15256099	15331906,15273133,15269042,15267551,15265643,15264766,15263548,15257173,15256263	Gene ID= ENSG00000141867.17 TPM= 3.38 Transcript Type= protein_coding
chr19	15252992	15332545	15252992	15332545	-	ENST00000360016.9@BRD4	ENST00000360016.9	protein_coding	15332290,15272815,15268905,15267416,15265354,15264404,15263420,15256964,15256064,15255297,15254152,15252992	15332545,15273133,15269042,15267551,15265643,15264766,15263548,15257173,15256263,15255592,15254262,15253783	Gene ID= ENSG00000141867.17 TPM= 81.09 Transcript Type= protein_coding
chr19	15235519	15280451	15235519	15280451	-	ENST00000263377.6@BRD4	ENST00000263377.6	protein_coding	15280264,15272815,15268905,15267416,15265354,15264404,15263420,15256964,15256064,15255297,15254152,15244710,15244231,15242900,15239910,15239659,15239392,15239059,15238743,15235519	15280451,15273133,15269042,15267551,15265643,15264766,15263548,15257173,15256263,15255592,15254262,15244762,15244600,15243487,15240022,15239821,15239522,15239264,15238980,15238445	Gene ID= ENSG00000141867.17 TPM= 1.93 Transcript Type= protein_coding
chr19	15368296	15379774	15368296	15379774	-	transcript2444.chr19.nic@AKAP8	transcript2444.chr19.nic	protein_coding	15379713,15376976,15374603,15373786,15372851,15372218,15371952,15370146,15368296	15379774,15377014,15374635,15374065,15373340,15372347,15371998,15370179,15368322	Gene ID= ENSG00000105127.8 TPM= 3.86 Transcript Type= NA
chr19	15353385	15379792	15353385	15379792	-	ENST00000269701.6@AKAP8	ENST00000269701.6	protein_coding	15379713,15376976,15374603,15373786,15372851,15372218,15371952,15370146,15368235,15362110,15361729,15360848,15358967,15353385	15379792,15377014,15374635,15374065,15373340,15372347,15371998,15370179,15368322,15362251,15361822,15360978,15359062,15355370	Gene ID= ENSG00000105127.8 TPM= 2.9 Transcript Type= protein_coding
chr19	15380050	15419121	15380050	15419121	-	ENST00000594594.6@AKAP8L	ENST00000594594.6	protein_coding	15418911,15410520,15404010,15403653,15403475,15401150,15400947,15400794,15400295,15399302,15398630,15397714,15397520,15397150,15380517,15380050	15419121,15410594,15404042,15403715,15403555,15401603,15401043,15400864,15400358,15399410,15398766,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 1.96 Transcript Type= nonsense_mediated_decay
chr19	15380050	15419043	15380050	15419043	-	transcript2448.chr19.nic@AKAP8L	transcript2448.chr19.nic	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15399302,15398630,15397714,15397520,15397150,15380517,15380050	15419043,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15398766,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 6.79 Transcript Type= NA
chr19	15380050	15419043	15380050	15419043	-	transcript2449.chr19.nic@AKAP8L	transcript2449.chr19.nic	protein_coding	15418911,15410520,15404010,15403658,15403475,15401150,15400947,15400794,15400295,15399302,15397714,15397520,15397150,15380517,15380050	15419043,15410594,15404042,15403715,15403555,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 8.72 Transcript Type= NA
chr19	15380048	15419054	15380048	15419054	-	ENST00000397410.9@AKAP8L	ENST00000397410.9	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15399302,15397714,15397520,15397150,15380517,15380048	15419054,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 53.12 Transcript Type= protein_coding
chr19	15380051	15418988	15380051	15418988	-	ENST00000593845.5@AKAP8L	ENST00000593845.5	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15398630,15397714,15397520,15397150,15380517,15380051	15418988,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 6.59 Transcript Type= retained_intron
chr19	15380050	15418988	15380050	15418988	-	ENST00000609519.5@AKAP8L	ENST00000609519.5	protein_coding	15418911,15410520,15404010,15403658,15403475,15401150,15400947,15400794,15400295,15399302,15398630,15397714,15397520,15397150,15380517,15380050	15418988,15410594,15404042,15403715,15403555,15401603,15401043,15400864,15400358,15399410,15398766,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 1.96 Transcript Type= nonsense_mediated_decay
chr19	15419980	15449951	15419980	15449951	-	ENST00000263381.11@WIZ	ENST00000263381.11	protein_coding	15449798,15448103,15436806,15426982,15425241,15424613,15424183,15419980	15449951,15448367,15437129,15427533,15425768,15425032,15424378,15423235	Gene ID= ENSG00000011451.17 TPM= 13.51 Transcript Type= protein_coding
chr19	15451624	15464571	15451624	15464571	-	ENST00000343625.11@RASAL3	ENST00000343625.11	protein_coding	15464505,15464031,15461471,15461218,15461060,15460203,15458529,15458328,15457292,15456502,15456104,15454657,15454361,15454149,15453107,15452658,15452045,15451624	15464571,15464377,15461607,15461296,15461121,15460258,15458655,15458426,15457834,15456646,15456248,15454893,15454562,15454267,15453497,15452815,15452108,15451938	Gene ID= ENSG00000105122.12 TPM= 1.93 Transcript Type= protein_coding
chr19	16076306	16103005	16076306	16103005	+	ENST00000300933.8@TPM4	ENST00000300933.8	protein_coding	16076306,16081913,16086423,16088027,16089045,16093536,16093684,16101264	16076697,16082046,16086540,16088097,16089120,16093598,16093753,16103005	Gene ID= ENSG00000167460.14 TPM= 65.64 Transcript Type= protein_coding
chr19	16111629	16134234	16111629	16134234	+	ENST00000300935.7@RAB8A	ENST00000300935.7	protein_coding	16111629,16118226,16121750,16125470,16127437,16128026,16129554,16132212	16112025,16118286,16121810,16125547,16127526,16128091,16129604,16134234	Gene ID= ENSG00000167461.11 TPM= 6.76 Transcript Type= protein_coding
chr19	16185418	16192046	16185418	16192046	+	ENST00000263384.11@FAM32A	ENST00000263384.11	protein_coding	16185418,16185624,16190520,16190887	16185516,16185765,16190573,16192046	Gene ID= ENSG00000105058.11 TPM= 64.68 Transcript Type= protein_coding
chr19	16197578	16245907	16197578	16245907	+	ENST00000291439.7@AP1M1	ENST00000291439.7	protein_coding	16197578,16203459,16206341,16208019,16209030,16226421,16227548,16228137,16228770,16233493,16234199,16234413	16198068,16203615,16206408,16208149,16209177,16226547,16227690,16228208,16228928,16233618,16234274,16245907	Gene ID= ENSG00000072958.8 TPM= 167 Transcript Type= protein_coding
chr19	16197934	16235345	16197934	16235345	+	ENST00000444449.6@AP1M1	ENST00000444449.6	protein_coding	16197934,16203459,16206341,16208019,16209030,16210360,16226421,16227548,16228137,16228770,16233493,16234199,16234413	16198068,16203615,16206408,16208149,16209177,16210395,16226547,16227690,16228208,16228928,16233618,16234274,16235345	Gene ID= ENSG00000072958.8 TPM= 11.58 Transcript Type= protein_coding
chr19	16324817	16327874	16324817	16327874	+	ENST00000248071.5@KLF2	ENST00000248071.5	protein_coding	16324817,16325216,16326856	16324998,16326032,16327874	Gene ID= ENSG00000127528.5 TPM= 20.27 Transcript Type= protein_coding
chr19	16325096	16327534	16325096	16327534	+	transcript2492.chr19.nic@KLF2	transcript2492.chr19.nic	protein_coding	16325096,16326856	16326032,16327534	Gene ID= ENSG00000127528.5 TPM= 8.69 Transcript Type= NA
chr19	16355239	16471973	16355239	16471973	-	transcript2493.chr19.nnic@EPS15L1	transcript2493.chr19.nnic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16373915,16361779,16355239	16471973,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16373962,16361984,16355851	Gene ID= ENSG00000127527.13 TPM= 41.04 Transcript Type= NA
chr19	16361578	16472057	16361578	16472057	-	transcript2499.chr19.nnic@EPS15L1	transcript2499.chr19.nnic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16373915,16361578	16472057,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16373962,16361984	Gene ID= ENSG00000127527.13 TPM= 18.83 Transcript Type= NA
chr19	16361581	16472085	16361581	16472085	-	ENST00000248070.10@EPS15L1	ENST00000248070.10	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16361581	16472085,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16361984	Gene ID= ENSG00000127527.13 TPM= 2.91 Transcript Type= protein_coding
chr19	16355244	16471990	16355244	16471990	-	transcript2505.chr19.nnic@EPS15L1	transcript2505.chr19.nnic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16355244	16471990,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16355851	Gene ID= ENSG00000127527.13 TPM= 18.35 Transcript Type= NA
chr19	16382989	16472057	16382989	16472057	-	transcript2508.chr19.nic@EPS15L1	transcript2508.chr19.nic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16382989	16472057,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16384275	Gene ID= ENSG00000127527.13 TPM= 5.8 Transcript Type= NA
chr19	16426751	16471965	16426751	16471965	-	transcript2514.chr19.nnic@EPS15L1	transcript2514.chr19.nnic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16426751	16471965,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16427256	Gene ID= ENSG00000127527.13 TPM= 2.9 Transcript Type= NA
chr19	16355239	16471961	16355239	16471961	-	ENST00000602022.5@EPS15L1	ENST00000602022.5	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16361779,16355239	16471961,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16361984,16355851	Gene ID= ENSG00000127527.13 TPM= 13.21 Transcript Type= nonsense_mediated_decay
chr19	16361597	16471976	16361597	16471976	-	ENST00000535753.6@EPS15L1	ENST00000535753.6	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16361597	16471976,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16361984	Gene ID= ENSG00000127527.13 TPM= 3.87 Transcript Type= protein_coding
chr19	16400631	16471950	16400631	16471950	-	ENST00000597937.5@EPS15L1	ENST00000597937.5	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16400631	16471950,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485	Gene ID= ENSG00000127527.13 TPM= 21.48 Transcript Type= protein_coding
chr19	16356329	16358327	16356329	16358327	-	ENST00000623994.1@AC020917.4	ENST00000623994.1	TEC	16356329	16358327	Gene ID= ENSG00000280332.1 TPM= 1.93 Transcript Type= TEC
chr19	16496311	16521350	16496311	16521350	+	ENST00000221671.7@C19orf44	ENST00000221671.7	protein_coding	16496311,16500792,16503065,16506701,16509499,16513014,16514497,16517230,16520094	16496465,16501551,16503380,16506774,16509988,16513109,16514663,16517341,16521350	Gene ID= ENSG00000105072.8 TPM= 3.86 Transcript Type= protein_coding
chr19	16517889	16542530	16517889	16542530	-	ENST00000546361.6@CHERP	ENST00000546361.6	protein_coding	16542354,16541870,16535452,16533011,16532598,16530769,16530585,16529648,16528080,16525242,16523052,16521521,16520826,16520364,16520149,16519621,16517889	16542530,16542043,16535636,16533148,16532749,16530880,16530674,16529900,16528255,16525677,16523290,16521654,16520912,16520507,16520265,16519715,16519352	Gene ID= ENSG00000085872.14 TPM= 52.13 Transcript Type= protein_coding
chr19	16549831	16572382	16549831	16572382	-	ENST00000595753.5@SLC35E1	ENST00000595753.5	protein_coding	16571944,16571512,16568032,16566532,16555152,16549831	16572382,16571582,16568169,16566657,16555397,16553909	Gene ID= ENSG00000127526.14 TPM= 9.65 Transcript Type= protein_coding
chr19	16574919	16628206	16574919	16628206	-	ENST00000263390.7@MED26	ENST00000263390.7	protein_coding	16627872,16578335,16574919	16628206,16578409,16577682	Gene ID= ENSG00000105085.10 TPM= 23.17 Transcript Type= protein_coding
chr19	16630751	16660130	16630751	16660130	-	ENST00000465250.6@SMIM7	ENST00000465250.6	protein_coding	16660085,16659959,16659395,16647096,16630751	16660130,16660000,16659447,16647261,16631724	Gene ID= ENSG00000214046.8 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr19	16646588	16660144	16646588	16660144	-	ENST00000602194.5@SMIM7	ENST00000602194.5	protein_coding	16660085,16659959,16659395,16647096,16646588	16660144,16660000,16659447,16647261,16646800	Gene ID= ENSG00000214046.8 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr19	16652356	16660142	16652356	16660142	-	ENST00000358726.6@SMIM7	ENST00000358726.6	protein_coding	16660085,16659959,16659395,16654035,16652356	16660142,16660000,16659447,16654125,16652961	Gene ID= ENSG00000214046.8 TPM= 2.9 Transcript Type= protein_coding
chr19	16660964	16695673	16660964	16695673	+	transcript2539.chr19.nnic@TMEM38A	transcript2539.chr19.nnic	protein_coding	16660964,16679984,16680397,16682421,16686288,16688144,16695659	16661341,16680140,16680581,16682508,16686405,16688993,16695673	Gene ID= ENSG00000072954.6 TPM= 15.44 Transcript Type= NA
chr19	16661127	16690029	16661127	16690029	+	ENST00000187762.6@TMEM38A	ENST00000187762.6	protein_coding	16661127,16679984,16680397,16682421,16686288,16688144	16661341,16680140,16680581,16682508,16686405,16690029	Gene ID= ENSG00000072954.6 TPM= 139 Transcript Type= protein_coding
chr19	16829407	16880353	16829407	16880353	+	ENST00000379803.5@SIN3B	ENST00000379803.5	protein_coding	16829407,16829791,16831494,16841768,16846970,16851412,16853069,16854143,16862352,16862884,16863680,16865410,16866373,16869460,16871229,16876055,16876486,16877545,16878183,16878497	16829540,16829897,16831647,16841968,16847113,16851534,16853158,16854261,16862559,16862979,16863796,16865648,16866556,16870075,16871398,16876228,16876578,16877639,16878390,16880353	Gene ID= ENSG00000127511.9 TPM= 8.69 Transcript Type= protein_coding
chr19	16829400	16880350	16829400	16880350	+	ENST00000248054.9@SIN3B	ENST00000248054.9	protein_coding	16829400,16829791,16831494,16841768,16846970,16851412,16853069,16854143,16862352,16863680,16865410,16866373,16869460,16871229,16876055,16876486,16877545,16878183,16878497	16829540,16829897,16831647,16841968,16847113,16851534,16853158,16854261,16862559,16863796,16865648,16866556,16870075,16871398,16876228,16876578,16877639,16878390,16880350	Gene ID= ENSG00000127511.9 TPM= 5.79 Transcript Type= protein_coding
chr19	16892947	17026815	16892947	17026815	-	ENST00000443236.5@CPAMD8	ENST00000443236.5	protein_coding	17026551,17022030,17020331,17011592,17011464,17009303,17008505,17004273,17002266,17000414,16997111,16993416,16989643,16980497,16977368,16976002,16975097,16970891,16957853,16951969,16947074,16945549,16938395,16928942,16928009,16925196,16921905,16914657,16914424,16906952,16904466,16904226,16903702,16903561,16902649,16901210,16899475,16897889,16897691,16896456,16896176,16892947	17026815,17022181,17020353,17011757,17011516,17009320,17008559,17004386,17002350,17000522,16997338,16993586,16989771,16980686,16977540,16976151,16975258,16971033,16957915,16952200,16947227,16945679,16938446,16929240,16928234,16925372,16921986,16914813,16914498,16907117,16904552,16904362,16903857,16903623,16902863,16901297,16899549,16897994,16897801,16896665,16896326,16893339	Gene ID= ENSG00000160111.12 TPM= 3.86 Transcript Type= protein_coding
chr19	17075744	17104071	17075744	17104071	+	transcript2589.chr19.nic@MYO9B	transcript2589.chr19.nic	protein_coding	17075744,17101660,17103257	17075874,17102557,17104071	Gene ID= ENSG00000099331.13 TPM= 7.72 Transcript Type= NA
chr19	17215359	17219829	17215359	17219829	+	ENST00000263897.9@USE1	ENST00000263897.9	protein_coding	17215359,17215802,17215992,17216169,17217453,17218364,17219213,17219631	17215507,17215851,17216070,17216321,17217462,17218391,17219387,17219829	Gene ID= ENSG00000053501.12 TPM= 44.89 Transcript Type= protein_coding
chr19	17215398	17219829	17215398	17219829	+	ENST00000445667.6@USE1	ENST00000445667.6	protein_coding	17215398,17215802,17215992,17216169,17218364,17219213,17219631	17215507,17215851,17216070,17216322,17218391,17219387,17219829	Gene ID= ENSG00000053501.12 TPM= 3.38 Transcript Type= protein_coding
chr19	17226570	17229215	17226570	17229215	+	transcript2606.chr19.nic@OCEL1	transcript2606.chr19.nic	protein_coding	17226570,17227840,17228256,17228803	17227199,17228005,17228309,17229215	Gene ID= ENSG00000099330.8 TPM= 2.9 Transcript Type= NA
chr19	17226606	17229215	17226606	17229215	+	transcript2613.chr19.nic@OCEL1	transcript2613.chr19.nic	protein_coding	17226606,17228256,17228803	17227199,17228309,17229215	Gene ID= ENSG00000099330.8 TPM= 1.93 Transcript Type= NA
chr19	17226204	17229219	17226204	17229219	+	ENST00000215061.8@OCEL1	ENST00000215061.8	protein_coding	17226204,17226693,17226994,17227840,17228256,17228803	17226316,17226869,17227199,17228005,17228309,17229219	Gene ID= ENSG00000099330.8 TPM= 5.79 Transcript Type= protein_coding
chr19	17231883	17245940	17231883	17245940	-	ENST00000291442.3@NR2F6	ENST00000291442.3	protein_coding	17244943,17240671,17235499,17231883	17245940,17240765,17236065,17232626	Gene ID= ENSG00000160113.5 TPM= 283.8 Transcript Type= protein_coding
chr19	17267350	17279337	17267350	17279337	+	ENST00000598188.5@BABAM1	ENST00000598188.5	protein_coding	17267350,17268794,17271597,17273904,17274107,17275801,17276495,17276823,17278845	17267527,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 43.05 Transcript Type= protein_coding
chr19	17267386	17279337	17267386	17279337	+	ENST00000359435.8@BABAM1	ENST00000359435.8	protein_coding	17267386,17268756,17271597,17273904,17274107,17275801,17276495,17276823,17278845	17267527,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 22.78 Transcript Type= protein_coding
chr19	17267443	17279337	17267443	17279337	+	transcript2621.chr19.nnic@BABAM1	transcript2621.chr19.nnic	protein_coding	17267443,17268794,17271597,17273904,17274107,17275801,17276495,17276823,17278845	17267477,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 5.41 Transcript Type= NA
chr19	17267443	17279337	17267443	17279337	+	ENST00000601043.5@BABAM1	ENST00000601043.5	protein_coding	17267443,17268794,17271597,17273904,17274107,17275801,17276495,17276823,17278845	17267516,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 6.37 Transcript Type= protein_coding
chr19	17267446	17268264	17267446	17268264	+	transcript2630.chr19.nnic@NA	transcript2630.chr19.nnic	NA	17267446	17268264	Gene ID= novel_gene_chr19_2631 TPM= 1.93 Transcript Type= NA
chr19	17292131	17303473	17292131	17303473	-	ENST00000247706.3@ABHD8	ENST00000247706.3	protein_coding	17303242,17300856,17294675,17294288,17292131	17303473,17301624,17294845,17294504,17292831	Gene ID= ENSG00000127220.5 TPM= 25.1 Transcript Type= protein_coding
chr19	17305668	17306843	17305668	17306843	+	ENST00000252602.1@MRPL34	ENST00000252602.1	protein_coding	17305668,17306166	17305957,17306843	Gene ID= ENSG00000130312.6 TPM= 139 Transcript Type= protein_coding
chr19	17309531	17323301	17309531	17323301	+	ENST00000359866.8@DDA1	ENST00000359866.8	protein_coding	17309531,17314023,17314338,17315934,17319546	17309657,17314103,17314389,17315995,17323301	Gene ID= ENSG00000130311.10 TPM= 32.82 Transcript Type= protein_coding
chr19	17337544	17342735	17337544	17342735	+	ENST00000324894.12@GTPBP3	ENST00000324894.12	protein_coding	17337544,17338008,17338365,17338539,17338954,17339123,17339434,17341044,17341478	17337664,17338255,17338451,17338741,17339026,17339266,17339599,17341322,17342735	Gene ID= ENSG00000130299.16 TPM= 2.9 Transcript Type= protein_coding
chr19	17337555	17342723	17337555	17342723	+	ENST00000600625.5@GTPBP3	ENST00000600625.5	protein_coding	17337555,17338008,17338365,17338539,17338954,17339123,17339434,17341107,17341478	17337664,17338255,17338451,17338741,17339026,17339266,17339599,17341322,17342723	Gene ID= ENSG00000130299.16 TPM= 4.83 Transcript Type= protein_coding
chr19	17351448	17377350	17351448	17377350	-	ENST00000252590.8@PLVAP	ENST00000252590.8	protein_coding	17376920,17366099,17365286,17360772,17360528,17351448	17377350,17366195,17365998,17360832,17360609,17352368	Gene ID= ENSG00000130300.8 TPM= 24.13 Transcript Type= protein_coding
chr19	17402939	17405648	17402939	17405648	-	ENST00000252593.6@BST2	ENST00000252593.6	protein_coding	17405291,17404371,17404129,17403680,17402939	17405648,17404437,17404189,17403824,17403326	Gene ID= ENSG00000130303.12 TPM= 20.27 Transcript Type= protein_coding
chr19	17419081	17425339	17419081	17425339	+	ENST00000317040.11@MVB12A	ENST00000317040.11	protein_coding	17419081,17420313,17420538,17422332,17423498,17423693,17424006,17424621,17424931	17420225,17420411,17420634,17422458,17423617,17423799,17424067,17424677,17425339	Gene ID= ENSG00000141971.12 TPM= 32.34 Transcript Type= protein_coding
chr19	17420029	17425339	17420029	17425339	+	transcript2650.chr19.nic@MVB12A	transcript2650.chr19.nic	protein_coding	17420029,17420313,17420538,17423498,17423693,17424006,17424621,17424931	17420225,17420411,17420634,17423617,17423799,17424067,17424677,17425339	Gene ID= ENSG00000141971.12 TPM= 4.34 Transcript Type= NA
chr19	17468702	17506168	17468702	17506168	+	transcript2654.chr19.nnic@SLC27A1	transcript2654.chr19.nnic	protein_coding	17468702,17470540,17486563,17487174,17487460,17488848,17489008,17491393,17497255,17500278,17500495,17500712,17501273,17504455	17469010,17470707,17486957,17487335,17487529,17488939,17489117,17491428,17497464,17500404,17500632,17500876,17501419,17506168	Gene ID= ENSG00000130304.16 TPM= 7.72 Transcript Type= NA
chr19	17467584	17506168	17467584	17506168	+	transcript2655.chr19.nnic@SLC27A1	transcript2655.chr19.nnic	protein_coding	17467584,17470540,17486563,17487174,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455	17467815,17470707,17486957,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506168	Gene ID= ENSG00000130304.16 TPM= 8.21 Transcript Type= NA
chr19	17468702	17506168	17468702	17506168	+	transcript2656.chr19.nic@SLC27A1	transcript2656.chr19.nic	protein_coding	17468702,17470540,17486563,17487174,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455	17469010,17470707,17486957,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506168	Gene ID= ENSG00000130304.16 TPM= 8.69 Transcript Type= NA
chr19	17470444	17506168	17470444	17506168	+	ENST00000252595.11@SLC27A1	ENST00000252595.11	protein_coding	17470444,17486563,17487174,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455	17470707,17486957,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506168	Gene ID= ENSG00000130304.16 TPM= 6.27 Transcript Type= protein_coding
chr19	17511629	17521288	17511629	17521288	+	ENST00000252603.6@PGLS	ENST00000252603.6	protein_coding	17511629,17516173,17517288,17517710,17520944	17511960,17516280,17517389,17517850,17521288	Gene ID= ENSG00000130313.6 TPM= 16.41 Transcript Type= protein_coding
chr19	17555594	17583159	17555594	17583159	+	ENST00000252599.8@COLGALT1	ENST00000252599.8	protein_coding	17555594,17559311,17560348,17567406,17568509,17572483,17577195,17577361,17577957,17579482,17580699,17581177	17555973,17559421,17560465,17567540,17568713,17572602,17577271,17577467,17578089,17579609,17580905,17583159	Gene ID= ENSG00000130309.10 TPM= 23.65 Transcript Type= protein_coding
chr19	17579951	17583162	17579951	17583162	+	ENST00000593832.1@COLGALT1	ENST00000593832.1	protein_coding	17579951,17581177	17580905,17583162	Gene ID= ENSG00000130309.10 TPM= 7.24 Transcript Type= retained_intron
chr19	17719352	17734516	17719352	17734516	+	ENST00000324096.8@MAP1S	ENST00000324096.8	protein_coding	17719352,17720936,17724126,17725049,17725829,17733193,17734273	17719620,17721037,17724208,17725189,17728172,17733428,17734516	Gene ID= ENSG00000130479.10 TPM= 93.64 Transcript Type= protein_coding
chr19	17859876	17863316	17859876	17863316	+	ENST00000222247.9@RPL18A	ENST00000222247.9	protein_coding	17859876,17861293,17862094,17862918,17863171	17859974,17861472,17862223,17863027,17863316	Gene ID= ENSG00000105640.12 TPM= 1246.22 Transcript Type= protein_coding
chr19	17859932	17863315	17859932	17863315	+	ENST00000599898.5@RPL18A	ENST00000599898.5	protein_coding	17859932,17861293,17861425,17862094,17862918,17863171	17859974,17861307,17861472,17862223,17863027,17863315	Gene ID= ENSG00000105640.12 TPM= 38.61 Transcript Type= protein_coding
chr19	17933016	17943937	17933016	17943937	+	ENST00000445755.6@CCDC124	ENST00000445755.6	protein_coding	17933016,17936410,17942656,17943261,17943508	17933048,17936579,17942845,17943375,17943937	Gene ID= ENSG00000007080.10 TPM= 83.98 Transcript Type= protein_coding
chr19	18001132	18014102	18001132	18014102	+	ENST00000379656.7@ARRDC2	ENST00000379656.7	protein_coding	18001132,18008711,18008971,18009592,18009783,18010196,18010572,18012913	18001573,18008777,18009118,18009694,18010039,18010358,18010729,18014102	Gene ID= ENSG00000105643.9 TPM= 87.07 Transcript Type= protein_coding
chr19	18008168	18014102	18008168	18014102	+	ENST00000222250.4@ARRDC2	ENST00000222250.4	protein_coding	18008168,18008711,18008971,18009592,18009783,18010196,18010572,18012913	18008584,18008777,18009118,18009694,18010039,18010358,18010729,18014102	Gene ID= ENSG00000105643.9 TPM= 386.8 Transcript Type= protein_coding
chr19	18013104	18015693	18013104	18015693	+	transcript2700.chr19.nnic@NA	transcript2700.chr19.nnic	NA	18013104	18015693	Gene ID= novel_gene_chr19_2701 TPM= 9.85 Transcript Type= NA
chr19	18097793	18151692	18097793	18151692	+	ENST00000262811.10@MAST3	ENST00000262811.10	protein_coding	18097793,18107587,18121685,18121850,18122673,18123217,18123580,18123939,18124265,18124642,18128400,18128866,18130494,18131909,18134579,18134817,18135740,18137239,18139015,18141882,18143763,18144466,18145003,18145743,18146881,18147443,18149191	18097831,18107618,18121773,18121922,18122751,18123374,18123655,18124148,18124366,18124774,18128458,18128951,18130702,18132047,18134711,18134982,18135841,18137361,18139124,18142015,18144007,18144693,18145229,18145865,18147017,18147624,18151692	Gene ID= ENSG00000099308.10 TPM= 3.86 Transcript Type= protein_coding
chr19	18153118	18170540	18153118	18170540	+	ENST00000222254.12@PIK3R2	ENST00000222254.12	protein_coding	18153118,18155457,18160471,18160919,18161054,18161279,18161966,18162202,18162408,18162967,18163263,18166160,18167130,18168475,18168726,18169087	18153294,18156201,18160563,18160969,18161185,18161495,18162051,18162310,18162506,18163147,18163388,18166302,18167306,18168546,18168896,18170540	Gene ID= ENSG00000105647.16 TPM= 5.79 Transcript Type= protein_coding
chr19	18173667	18178117	18173667	18178117	+	ENST00000407280.3@IFI30	ENST00000407280.3	protein_coding	18173667,18175040,18175311,18175605,18177140,18177711,18177849	18173973,18175222,18175385,18175697,18177292,18177764,18178117	Gene ID= ENSG00000216490.3 TPM= 14.48 Transcript Type= protein_coding
chr19	18193182	18196742	18193182	18196742	+	ENST00000599612.2@MPV17L2	ENST00000599612.2	protein_coding	18193182,18193864,18194777,18194958,18195999	18193468,18194034,18194853,18195086,18196742	Gene ID= ENSG00000254858.9 TPM= 22.2 Transcript Type= protein_coding
chr19	18196784	18204074	18196784	18204074	-	ENST00000222256.8@RAB3A	ENST00000222256.8	protein_coding	18203896,18202513,18200327,18198725,18196784	18204074,18202740,18200445,18198849,18197660	Gene ID= ENSG00000105649.9 TPM= 1.93 Transcript Type= protein_coding
chr19	18279760	18281622	18279760	18281622	-	ENST00000252818.4@JUND	ENST00000252818.4	protein_coding	18279760	18281622	Gene ID= ENSG00000130522.5 TPM= 335.93 Transcript Type= protein_coding
chr19	18306230	18323274	18306230	18323274	-	ENST00000593829.5@LSM4	ENST00000593829.5	protein_coding	18323018,18316024,18312604,18309678,18306230	18323274,18316065,18312702,18309861,18307555	Gene ID= ENSG00000130520.10 TPM= 148.66 Transcript Type= protein_coding
chr19	18306916	18323060	18306916	18323060	-	ENST00000600289.6@LSM4	ENST00000600289.6	protein_coding	18323018,18316024,18312604,18310110,18309678,18306916	18323060,18316065,18312702,18310214,18309861,18307555	Gene ID= ENSG00000130520.10 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr19	18340587	18369950	18340587	18369950	+	ENST00000269919.10@PGPEP1	ENST00000269919.10	protein_coding	18340587,18342859,18355895,18357383,18363391	18340715,18342911,18356011,18357615,18369950	Gene ID= ENSG00000130517.13 TPM= 11.58 Transcript Type= protein_coding
chr19	18419343	18434562	18419343	18434562	+	transcript2723.chr19.nic@SSBP4	transcript2723.chr19.nic	protein_coding	18419343,18427351,18427752,18427898,18430841,18431353,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431418,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433932,18434562	Gene ID= ENSG00000130511.15 TPM= 2.9 Transcript Type= NA
chr19	18419336	18434562	18419336	18434562	+	ENST00000348495.10@SSBP4	ENST00000348495.10	protein_coding	18419336,18427351,18427752,18427898,18430841,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433817,18434562	Gene ID= ENSG00000130511.15 TPM= 32.34 Transcript Type= protein_coding
chr19	18419343	18434562	18419343	18434562	+	transcript2730.chr19.nic@SSBP4	transcript2730.chr19.nic	protein_coding	18419343,18427351,18427752,18427898,18430841,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433932,18434562	Gene ID= ENSG00000130511.15 TPM= 19.31 Transcript Type= NA
chr19	18419355	18434562	18419355	18434562	+	ENST00000270061.11@SSBP4	ENST00000270061.11	protein_coding	18419355,18427351,18427752,18427898,18430841,18431353,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431418,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433817,18434562	Gene ID= ENSG00000130511.15 TPM= 8.21 Transcript Type= protein_coding
chr19	18432200	18434562	18432200	18434562	+	ENST00000593641.3@SSBP4	ENST00000593641.3	protein_coding	18432200,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433932,18434562	Gene ID= ENSG00000130511.15 TPM= 2.9 Transcript Type= protein_coding
chr19	18434388	18438301	18434388	18438301	-	ENST00000338128.12@ISYNA1	ENST00000338128.12	protein_coding	18438093,18437860,18437599,18436973,18436684,18436330,18436032,18435757,18435563,18435266,18434388	18438301,18437988,18437760,18437105,18436877,18436479,18436247,18435921,18435676,18435483,18435117	Gene ID= ENSG00000105655.18 TPM= 8.69 Transcript Type= protein_coding
chr19	18434822	18438109	18434822	18438109	-	transcript2736.chr19.nic@ISYNA1	transcript2736.chr19.nic	protein_coding	18437860,18437599,18436973,18436684,18436330,18436032,18435757,18435563,18435266,18434822	18438109,18437760,18437105,18436877,18436479,18436247,18435921,18435676,18435483,18435117	Gene ID= ENSG00000105655.18 TPM= 4.34 Transcript Type= NA
chr19	18434809	18438167	18434809	18438167	-	ENST00000457269.8@ISYNA1	ENST00000457269.8	protein_coding	18438093,18437860,18436973,18436684,18436330,18436032,18435757,18435563,18435266,18434809	18438167,18437988,18437105,18436877,18436479,18436247,18435921,18435676,18435483,18435117	Gene ID= ENSG00000105655.18 TPM= 1.45 Transcript Type= protein_coding
chr19	18442663	18522127	18442663	18522127	-	ENST00000262809.8@ELL	ENST00000262809.8	protein_coding	18521921,18472835,18465797,18465412,18461578,18458205,18451552,18450477,18446748,18446309,18445224,18442663	18522127,18472882,18465918,18465575,18461852,18458329,18451648,18450975,18446814,18446480,18445268,18444868	Gene ID= ENSG00000105656.12 TPM= 89.77 Transcript Type= protein_coding
chr19	18454047	18456974	18454047	18456974	+	transcript2750.chr19.nnic@NA	transcript2750.chr19.nnic	NA	18454047	18456974	Gene ID= novel_gene_chr19_2751 TPM= 3.86 Transcript Type= NA
chr19	18531762	18543660	18531762	18543660	-	ENST00000608443.5@FKBP8	ENST00000608443.5	protein_coding	18543486,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531762	18543660,18541995,18539720,18539459,18538436,18537773,18533347,18532795,18532255	Gene ID= ENSG00000105701.15 TPM= 131.6 Transcript Type= protein_coding
chr19	18531762	18543524	18531762	18543524	-	ENST00000222308.8@FKBP8	ENST00000222308.8	protein_coding	18543486,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531762	18543524,18541995,18539720,18539459,18538433,18537773,18533347,18532795,18532255	Gene ID= ENSG00000105701.15 TPM= 13.83 Transcript Type= protein_coding
chr19	18531752	18543573	18531752	18543573	-	ENST00000544835.7@FKBP8	ENST00000544835.7	protein_coding	18543486,18541679,18537601,18533270,18532664,18531752	18543573,18541995,18537773,18533347,18532795,18532255	Gene ID= ENSG00000105701.15 TPM= 6.11 Transcript Type= protein_coding
chr19	18557762	18569387	18557762	18569387	+	ENST00000540691.5@KXD1	ENST00000540691.5	protein_coding	18557762,18560420,18562036,18564869,18567132,18568402	18557914,18560550,18562157,18565021,18567178,18569387	Gene ID= ENSG00000105700.10 TPM= 13.51 Transcript Type= protein_coding
chr19	18557788	18569378	18557788	18569378	+	ENST00000222307.8@KXD1	ENST00000222307.8	protein_coding	18557788,18562036,18564869,18567132,18568402	18557914,18562157,18565021,18567178,18569378	Gene ID= ENSG00000105700.10 TPM= 99.43 Transcript Type= protein_coding
chr19	18571802	18575241	18571802	18575241	+	ENST00000430157.6@UBA52	ENST00000430157.6	protein_coding	18571802,18573293,18573662,18574870,18575057	18571887,18573403,18573748,18574972,18575241	Gene ID= ENSG00000221983.7 TPM= 287.18 Transcript Type= protein_coding
chr19	18571730	18575202	18571730	18575202	+	ENST00000596304.5@UBA52	ENST00000596304.5	protein_coding	18571730,18573293,18573662,18574870,18575057	18571836,18573403,18573748,18574972,18575202	Gene ID= ENSG00000221983.7 TPM= 1.45 Transcript Type= protein_coding
chr19	18571855	18575229	18571855	18575229	+	ENST00000596273.5@UBA52	ENST00000596273.5	protein_coding	18571855,18572351,18573293,18573662,18574870,18575057	18571887,18572607,18573403,18573748,18574972,18575229	Gene ID= ENSG00000221983.7 TPM= 5.79 Transcript Type= protein_coding
chr19	18575272	18577459	18575272	18577459	+	transcript2785.chr19.nnic@NA	transcript2785.chr19.nnic	NA	18575272	18577459	Gene ID= novel_gene_chr19_2786 TPM= 2.9 Transcript Type= NA
chr19	18588561	18589146	18588561	18589146	-	transcript2804.chr19.nnic@NA	transcript2804.chr19.nnic	NA	18588561	18589146	Gene ID= novel_gene_chr19_2805 TPM= 2.9 Transcript Type= NA
chr19	18588725	18592336	18588725	18592336	+	ENST00000358607.10@C19orf60	ENST00000358607.10	protein_coding	18588725,18588995,18589413,18590854,18592108	18588900,18589077,18589683,18590933,18592336	Gene ID= ENSG00000006015.17 TPM= 60.84 Transcript Type= protein_coding
chr19	18588796	18592336	18588796	18592336	+	ENST00000450195.6@C19orf60	ENST00000450195.6	protein_coding	18588796,18588995,18589479,18590854,18592108	18588900,18589077,18589683,18590933,18592336	Gene ID= ENSG00000006015.17 TPM= 51.19 Transcript Type= protein_coding
chr19	18588809	18592327	18588809	18592327	+	ENST00000597371.1@C19orf60	ENST00000597371.1	protein_coding	18588809,18588995,18590854,18592108	18588900,18589683,18590933,18592327	Gene ID= ENSG00000006015.17 TPM= 37.6 Transcript Type= retained_intron
chr19	18588798	18592336	18588798	18592336	+	ENST00000600997.5@C19orf60	ENST00000600997.5	protein_coding	18588798,18588995,18590854	18588900,18589683,18592336	Gene ID= ENSG00000006015.17 TPM= 5.79 Transcript Type= retained_intron
chr19	18588802	18592336	18588802	18592336	+	ENST00000601736.1@C19orf60	ENST00000601736.1	protein_coding	18588802,18588995,18590854,18592108	18588900,18589077,18590933,18592336	Gene ID= ENSG00000006015.17 TPM= 11.54 Transcript Type= nonsense_mediated_decay
chr19	18589602	18592336	18589602	18592336	+	ENST00000595490.1@C19orf60	ENST00000595490.1	protein_coding	18589602,18590854,18592089	18589683,18590933,18592336	Gene ID= ENSG00000006015.17 TPM= 9.65 Transcript Type= protein_coding
chr19	18593237	18607080	18593237	18607080	-	transcript2809.chr19.nnic@CRLF1	transcript2809.chr19.nnic	protein_coding	18606542,18599565,18598772,18598432,18596892,18596622,18594247,18594065,18593237	18607080,18599846,18598901,18598601,18597049,18596790,18594434,18594112,18593579	Gene ID= ENSG00000006016.10 TPM= 13.51 Transcript Type= NA
chr19	18593237	18606788	18593237	18606788	-	transcript2810.chr19.nnic@CRLF1	transcript2810.chr19.nnic	protein_coding	18606542,18599565,18598772,18598432,18596892,18596664,18594247,18594065,18593237	18606788,18599846,18598901,18598601,18597049,18596790,18594434,18594112,18593579	Gene ID= ENSG00000006016.10 TPM= 3.86 Transcript Type= NA
chr19	18593237	18606850	18593237	18606850	-	ENST00000392386.7@CRLF1	ENST00000392386.7	protein_coding	18606542,18599565,18598772,18598432,18596892,18596622,18594247,18594065,18593237	18606850,18599846,18598901,18598601,18597049,18596790,18594434,18594107,18593579	Gene ID= ENSG00000006016.10 TPM= 37.65 Transcript Type= protein_coding
chr19	18593237	18594134	18593237	18594134	-	ENST00000596360.1@CRLF1	ENST00000596360.1	protein_coding	18594065,18593237	18594134,18593579	Gene ID= ENSG00000006016.10 TPM= 1.93 Transcript Type= retained_intron
chr19	18607430	18621039	18607430	18621039	+	ENST00000600490.5@TMEM59L	ENST00000600490.5	protein_coding	18607430,18612851,18613872,18614104,18615975,18617000,18618155,18618375,18620408	18607506,18613129,18614016,18614195,18616127,18617102,18618272,18618492,18621039	Gene ID= ENSG00000105696.8 TPM= 3.86 Transcript Type= protein_coding
chr19	18636965	18671714	18636965	18671714	+	ENST00000300976.8@KLHL26	ENST00000300976.8	protein_coding	18636965,18664261,18667664	18637137,18664443,18671714	Gene ID= ENSG00000167487.11 TPM= 1.93 Transcript Type= protein_coding
chr19	18831938	18868236	18831938	18868236	+	ENST00000262803.9@UPF1	ENST00000262803.9	protein_coding	18831938,18845980,18847744,18850075,18850688,18852135,18852987,18853252,18854601,18854879,18855124,18855925,18856186,18856877,18857320,18860321,18860826,18862010,18863438,18864170,18865289,18865561,18866044,18866521	18832440,18846119,18847833,18850242,18850868,18852296,18853071,18853350,18854709,18855038,18855242,18856089,18856300,18857020,18857533,18860438,18860982,18862152,18863612,18864251,18865450,18865778,18866166,18868236	Gene ID= ENSG00000005007.12 TPM= 69.02 Transcript Type= protein_coding
chr19	18832001	18868229	18832001	18868229	+	ENST00000599848.5@UPF1	ENST00000599848.5	protein_coding	18832001,18845980,18847744,18850075,18850688,18852135,18852987,18853252,18854601,18854879,18855124,18855925,18856186,18856877,18857320,18860321,18860826,18862010,18863438,18864170,18865289,18865561,18866044,18866521	18832440,18846119,18847833,18850242,18850868,18852296,18853104,18853350,18854709,18855038,18855242,18856089,18856300,18857020,18857533,18860438,18860982,18862152,18863612,18864251,18865450,18865778,18866166,18868229	Gene ID= ENSG00000005007.12 TPM= 32.34 Transcript Type= protein_coding
chr19	18877917	18896170	18877917	18896170	-	transcript2831.chr19.nic@CERS1	transcript2831.chr19.nic	protein_coding	18895824,18893416,18884087,18880274,18879241,18878930,18877917	18896170,18893575,18884267,18880435,18879388,18879039,18878098	Gene ID= ENSG00000223802.7 TPM= 2.9 Transcript Type= NA
chr19	18868552	18896144	18868552	18896144	-	ENST00000623927.1@CERS1	ENST00000623927.1	protein_coding	18895824,18893416,18884087,18880274,18879241,18878930,18869983,18868552	18896144,18893575,18884267,18880435,18879388,18879039,18870619,18869390	Gene ID= ENSG00000223802.7 TPM= 5.79 Transcript Type= protein_coding
chr19	18877909	18896135	18877909	18896135	-	ENST00000429504.6@CERS1	ENST00000429504.6	protein_coding	18895824,18893416,18884087,18880274,18879241,18877909	18896135,18893575,18884267,18880435,18879388,18879039	Gene ID= ENSG00000223802.7 TPM= 8.69 Transcript Type= protein_coding
chr19	18899514	18919397	18899514	18919397	-	ENST00000262812.8@COPE	ENST00000262812.8	protein_coding	18919223,18912984,18910971,18906960,18905576,18904771,18903268,18900381,18899873,18899514	18919397,18913046,18911071,18907112,18905629,18904852,18903423,18900449,18899947,18899726	Gene ID= ENSG00000105669.13 TPM= 244.71 Transcript Type= protein_coding
chr19	18919675	18928633	18919675	18928633	+	ENST00000629999.2@DDX49	ENST00000629999.2	protein_coding	18919675,18920580,18920834,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128	18919856,18920703,18920909,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928633	Gene ID= ENSG00000105671.11 TPM= 5.15 Transcript Type= protein_coding
chr19	18919675	18928627	18919675	18928627	+	ENST00000247003.8@DDX49	ENST00000247003.8	protein_coding	18919675,18920580,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128	18919856,18920703,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928627	Gene ID= ENSG00000105671.11 TPM= 41.83 Transcript Type= protein_coding
chr19	18919738	18928622	18919738	18928622	+	ENST00000602113.5@DDX49	ENST00000602113.5	protein_coding	18919738,18920651,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128	18919856,18920703,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928622	Gene ID= ENSG00000105671.11 TPM= 5.15 Transcript Type= nonsense_mediated_decay
chr19	18929203	18941289	18929203	18941289	-	transcript2851.chr19.nic@HOMER3	transcript2851.chr19.nic	protein_coding	18941193,18938969,18938728,18938353,18934303,18932924,18931976,18931509,18931325,18929203	18941289,18939049,18938884,18938484,18934410,18933045,18932132,18931625,18931411,18929634	Gene ID= ENSG00000051128.18 TPM= 31.37 Transcript Type= NA
chr19	18929203	18941214	18929203	18941214	-	ENST00000392351.7@HOMER3	ENST00000392351.7	protein_coding	18941051,18938969,18938728,18938353,18934303,18932924,18931976,18931509,18931325,18929203	18941214,18939049,18938884,18938484,18934410,18933045,18932132,18931625,18931411,18929634	Gene ID= ENSG00000051128.18 TPM= 119.22 Transcript Type= protein_coding
chr19	18990888	19033547	18990888	19033547	-	transcript2868.chr19.nic@SUGP2	transcript2868.chr19.nic	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18993638,18990888	19033547,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18993740,18991149	Gene ID= ENSG00000064607.16 TPM= 6.03 Transcript Type= NA
chr19	18990893	19033559	18990893	19033559	-	ENST00000337018.10@SUGP2	ENST00000337018.10	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18990893	19033559,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18991149	Gene ID= ENSG00000064607.16 TPM= 10.86 Transcript Type= protein_coding
chr19	18990893	19033842	18990893	19033842	-	transcript2878.chr19.nic@SUGP2	transcript2878.chr19.nic	protein_coding	19033762,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18990893	19033842,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18991149	Gene ID= ENSG00000064607.16 TPM= 3.86 Transcript Type= NA
chr19	18990888	19033499	18990888	19033499	-	ENST00000452918.6@SUGP2	ENST00000452918.6	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18990888	19033499,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18993740	Gene ID= ENSG00000064607.16 TPM= 10.86 Transcript Type= protein_coding
chr19	19033583	19058178	19033583	19058178	+	transcript2888.chr19.nic@ARMC6	transcript2888.chr19.nic	protein_coding	19033583,19034131,19037552,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19033930,19034238,19037707,19042877,19044074,19052195,19054321,19055396,19055928,19058178	Gene ID= ENSG00000105676.13 TPM= 2.51 Transcript Type= NA
chr19	19033578	19058178	19033578	19058178	+	ENST00000535612.5@ARMC6	ENST00000535612.5	protein_coding	19033578,19034131,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19033930,19034238,19042877,19044074,19052195,19054321,19055396,19055928,19058178	Gene ID= ENSG00000105676.13 TPM= 24.71 Transcript Type= protein_coding
chr19	19033585	19058178	19033585	19058178	+	transcript2896.chr19.nnic@ARMC6	transcript2896.chr19.nnic	protein_coding	19033585,19034131,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19034013,19034238,19042877,19044074,19052195,19054321,19055396,19055928,19058178	Gene ID= ENSG00000105676.13 TPM= 2.51 Transcript Type= NA
chr19	19033610	19058178	19033610	19058178	+	transcript2898.chr19.nic@ARMC6	transcript2898.chr19.nic	protein_coding	19033610,19037552,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19033930,19037707,19042877,19044074,19052195,19054321,19055396,19055928,19058178	Gene ID= ENSG00000105676.13 TPM= 3.48 Transcript Type= NA
chr19	19033575	19058178	19033575	19058178	+	ENST00000392335.6@ARMC6	ENST00000392335.6	protein_coding	19033575,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19033930,19042877,19044074,19052195,19054321,19055396,19055928,19058178	Gene ID= ENSG00000105676.13 TPM= 32.43 Transcript Type= protein_coding
chr19	19033610	19058159	19033610	19058159	+	ENST00000269932.10@ARMC6	ENST00000269932.10	protein_coding	19033610,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19034013,19042877,19044074,19052195,19054321,19055396,19055928,19058159	Gene ID= ENSG00000105676.13 TPM= 15.44 Transcript Type= protein_coding
chr19	19063976	19112888	19063976	19112888	+	transcript2905.chr19.nic@SLC25A42	transcript2905.chr19.nic	protein_coding	19063976,19096091,19101781,19104913,19105561,19106269,19107894,19110569	19064046,19096205,19101886,19104938,19105727,19106385,19108045,19112888	Gene ID= ENSG00000181035.13 TPM= 2.9 Transcript Type= NA
chr19	19063966	19112888	19063966	19112888	+	transcript2909.chr19.nic@SLC25A42	transcript2909.chr19.nic	protein_coding	19063966,19096091,19104913,19105561,19106269,19107894,19110569	19064115,19096205,19104938,19105727,19106385,19108045,19112888	Gene ID= ENSG00000181035.13 TPM= 1.93 Transcript Type= NA
chr19	19063999	19112888	19063999	19112888	+	ENST00000318596.7@SLC25A42	ENST00000318596.7	protein_coding	19063999,19096091,19101781,19104913,19105561,19106269,19107894,19110569	19064115,19096205,19101886,19104938,19105727,19106385,19108045,19112888	Gene ID= ENSG00000181035.13 TPM= 47.3 Transcript Type= protein_coding
chr19	19119615	19138493	19119615	19138493	-	ENST00000162044.13@TMEM161A	ENST00000162044.13	protein_coding	19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121525,19121308,19120992,19120765,19119615	19138493,19134887,19133210,19132754,19132508,19130307,19121819,19121668,19121421,19121166,19120861,19120183	Gene ID= ENSG00000064545.14 TPM= 116.97 Transcript Type= protein_coding
chr19	19119615	19138465	19119615	19138465	-	transcript2929.chr19.nic@TMEM161A	transcript2929.chr19.nic	protein_coding	19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121525,19120992,19120765,19119615	19138465,19134887,19133210,19132754,19132508,19130307,19121819,19121668,19121166,19120861,19120183	Gene ID= ENSG00000064545.14 TPM= 11.27 Transcript Type= NA
chr19	19119615	19138493	19119615	19138493	-	ENST00000587406.5@TMEM161A	ENST00000587406.5	protein_coding	19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121308,19120992,19120765,19119615	19138493,19134887,19133210,19132754,19132508,19130307,19121819,19121668,19121166,19120861,19120183	Gene ID= ENSG00000064545.14 TPM= 23.33 Transcript Type= retained_intron
chr19	19119660	19138447	19119660	19138447	-	ENST00000587583.6@TMEM161A	ENST00000587583.6	protein_coding	19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121525,19121308,19120992,19120765,19119660	19138447,19134887,19133210,19132754,19132433,19130307,19121819,19121668,19121421,19121166,19120861,19120183	Gene ID= ENSG00000064545.14 TPM= 4.83 Transcript Type= protein_coding
chr19	19176906	19192589	19176906	19192589	-	ENST00000462790.7@BORCS8	ENST00000462790.7	protein_coding	19192081,19186893,19186034,19182573,19180686,19176906	19192589,19187005,19186098,19182683,19180761,19177460	Gene ID= ENSG00000254901.7 TPM= 43.44 Transcript Type= protein_coding
chr19	19181882	19192589	19181882	19192589	-	ENST00000477565.3@BORCS8	ENST00000477565.3	protein_coding	19192081,19186893,19186034,19181882	19192589,19187005,19186098,19182683	Gene ID= ENSG00000254901.7 TPM= 2.9 Transcript Type= protein_coding
chr19	19176906	19192139	19176906	19192139	-	ENST00000585679.1@BORCS8	ENST00000585679.1	protein_coding	19192081,19182573,19180686,19176906	19192139,19182683,19180761,19177460	Gene ID= ENSG00000254901.7 TPM= 14.48 Transcript Type= protein_coding
chr19	19192823	19201866	19192823	19201866	+	transcript2949.chr19.nic@RFXANK	transcript2949.chr19.nic	protein_coding	19192823,19193939,19196966,19197186,19197521,19198107,19198657,19199154,19201649	19193100,19194133,19197046,19197251,19197621,19198232,19198723,19199234,19201866	Gene ID= ENSG00000064490.13 TPM= 22.68 Transcript Type= NA
chr19	19192911	19201866	19192911	19201866	+	ENST00000392324.8@RFXANK	ENST00000392324.8	protein_coding	19192911,19193939,19196966,19197521,19198107,19198657,19199154,19201649	19193100,19194133,19197046,19197621,19198232,19198723,19199234,19201866	Gene ID= ENSG00000064490.13 TPM= 3.38 Transcript Type= protein_coding
chr19	19201416	19203424	19201416	19203424	-	ENST00000331552.11@NR2C2AP	ENST00000331552.11	protein_coding	19203023,19202791,19202470,19202331,19201416	19203424,19202881,19202575,19202398,19202041	Gene ID= ENSG00000184162.14 TPM= 8.69 Transcript Type= protein_coding
chr19	19276511	19320844	19276511	19320844	-	ENST00000247001.9@SUGP1	ENST00000247001.9	protein_coding	19320463,19316422,19310097,19305849,19303724,19303348,19302265,19296989,19280185,19279213,19278690,19277734,19276947,19276511	19320844,19316593,19310200,19306076,19303847,19303448,19302388,19297344,19280291,19279390,19278796,19277879,19277076,19276674	Gene ID= ENSG00000105705.15 TPM= 25.58 Transcript Type= protein_coding
chr19	19276515	19320509	19276515	19320509	-	transcript2969.chr19.nic@SUGP1	transcript2969.chr19.nic	protein_coding	19320463,19316422,19310097,19305849,19303724,19303348,19302265,19296989,19280185,19279213,19278690,19277734,19276947,19276515	19320509,19316593,19310200,19306076,19303912,19303448,19302388,19297344,19280291,19279390,19278796,19277879,19277076,19276674	Gene ID= ENSG00000105705.15 TPM= 4.34 Transcript Type= NA
chr19	19320681	19358755	19320681	19358755	+	ENST00000262815.12@MAU2	ENST00000262815.12	protein_coding	19320681,19335718,19336122,19337170,19338845,19340846,19341252,19342535,19342776,19343837,19344849,19345304,19347280,19348889,19349155,19349325,19354355,19355264,19355708	19321135,19335735,19336187,19337265,19338939,19340873,19341407,19342681,19342866,19343940,19344926,19345369,19347366,19348938,19349232,19349436,19354445,19355391,19358755	Gene ID= ENSG00000129933.20 TPM= 27.03 Transcript Type= protein_coding
chr19	19629476	19643667	19629476	19643667	-	ENST00000203556.8@GMIP	ENST00000203556.8	protein_coding	19643511,19642535,19641976,19641810,19640446,19640296,19640085,19638402,19638159,19637920,19637365,19636917,19636707,19635644,19635415,19635025,19634792,19634507,19633803,19630471,19629476	19643667,19642619,19642051,19641867,19640571,19640360,19640192,19638482,19638329,19638057,19637561,19637029,19636796,19635721,19635569,19635213,19634929,19634703,19634190,19630537,19630336	Gene ID= ENSG00000089639.10 TPM= 1.93 Transcript Type= protein_coding
chr19	19645200	19663685	19645200	19663685	-	transcript2994.chr19.nic@ATP13A1	transcript2994.chr19.nic	protein_coding	19663271,19659898,19659601,19657336,19656994,19656847,19656660,19656054,19655878,19655528,19655316,19655119,19654543,19653969,19653784,19652595,19651689,19649741,19649567,19647599,19647414,19647129,19646205,19645874,19645647,19645200	19663685,19659987,19659791,19657408,19657149,19656916,19656766,19656183,19655933,19655654,19655453,19655239,19654700,19654074,19653894,19652720,19651797,19649940,19649663,19647759,19647528,19647325,19646347,19645985,19645790,19645532	Gene ID= ENSG00000105726.16 TPM= 24.62 Transcript Type= NA
chr19	19645203	19663693	19645203	19663693	-	ENST00000357324.10@ATP13A1	ENST00000357324.10	protein_coding	19663271,19659898,19659601,19657336,19656994,19656847,19656660,19656054,19655878,19655528,19655316,19655119,19654543,19653969,19653784,19652595,19651689,19649741,19649567,19647599,19647414,19647129,19646205,19645874,19645647,19645203	19663693,19659987,19659791,19657408,19657149,19656916,19656766,19656183,19655933,19655654,19655453,19655239,19654700,19654144,19653894,19652720,19651797,19649940,19649663,19647759,19647528,19647325,19646347,19645985,19645790,19645532	Gene ID= ENSG00000105726.16 TPM= 11.1 Transcript Type= protein_coding
chr19	19710471	19733097	19710471	19733097	-	ENST00000344099.3@ZNF14	ENST00000344099.3	protein_coding	19732956,19714361,19714091,19710471	19733097,19714487,19714151,19713089	Gene ID= ENSG00000105708.8 TPM= 2.9 Transcript Type= protein_coding
chr19	19865907	19893648	19865907	19893648	+	ENST00000355650.4@ZNF253	ENST00000355650.4	protein_coding	19865907,19891474	19865999,19893648	Gene ID= ENSG00000256771.3 TPM= 1.93 Transcript Type= protein_coding
chr19	19895552	19897770	19895552	19897770	+	transcript3009.chr19.nnic@NA	transcript3009.chr19.nnic	NA	19895552	19897770	Gene ID= novel_gene_chr19_3010 TPM= 1.93 Transcript Type= NA
chr19	20640567	20660984	20640567	20660984	-	transcript3015.chr19.nnic@ZNF626	transcript3015.chr19.nnic	protein_coding	20660427,20646279,20645684,20640567	20660984,20646405,20645779,20645448	Gene ID= ENSG00000188171.15 TPM= 3.86 Transcript Type= NA
chr19	21020620	21060050	21020620	21060050	+	ENST00000261560.9@ZNF430	ENST00000261560.9	protein_coding	21020620,21022789,21033456,21034086,21056631	21020803,21022881,21033582,21034184,21060050	Gene ID= ENSG00000118620.12 TPM= 2.9 Transcript Type= protein_coding
chr19	21142016	21185954	21142016	21185954	+	transcript3028.chr19.nnic@ZNF431	transcript3028.chr19.nnic	protein_coding	21142016,21143551,21166335,21167571,21169803,21175453,21182623	21142186,21143643,21166461,21167666,21169882,21175474,21185954	Gene ID= ENSG00000196705.8 TPM= 1.93 Transcript Type= NA
chr19	21505564	21538078	21505564	21538078	+	ENST00000358491.8@ZNF429	ENST00000358491.8	protein_coding	21505564,21529658,21530589,21536280	21505774,21529784,21530684,21538078	Gene ID= ENSG00000197013.9 TPM= 1.93 Transcript Type= protein_coding
chr19	21729436	21731424	21729436	21731424	+	transcript3059.chr19.nnic@NA	transcript3059.chr19.nnic	NA	21729436	21731424	Gene ID= novel_gene_chr19_3060 TPM= 1.93 Transcript Type= NA
chr19	21765538	21767597	21765538	21767597	-	transcript3061.chr19.nnic@NA	transcript3061.chr19.nnic	NA	21765538	21767597	Gene ID= novel_gene_chr19_3062 TPM= 1.93 Transcript Type= NA
chr19	21807326	21836208	21807326	21836208	-	ENST00000354959.8@ZNF43	ENST00000354959.8	protein_coding	21836036,21819095,21817888,21807326	21836208,21819221,21817986,21809807	Gene ID= ENSG00000198521.11 TPM= 1.93 Transcript Type= protein_coding
chr19	23357696	23395560	23357696	23395560	-	ENST00000300619.11@ZNF91	ENST00000300619.11	protein_coding	23395325,23374638,23373742,23357696	23395560,23374764,23373837,23362725	Gene ID= ENSG00000167232.13 TPM= 3.86 Transcript Type= protein_coding
chr19	23359227	23492679	23359227	23492679	-	transcript3083.chr19.nnic@ZNF91	transcript3083.chr19.nnic	protein_coding	23492637,23491315,23490701,23359227	23492679,23492048,23490729,23362725	Gene ID= ENSG00000167232.13 TPM= 7.72 Transcript Type= NA
chr19	23368792	23395505	23368792	23395505	-	transcript3085.chr19.nic@ZNF91	transcript3085.chr19.nic	protein_coding	23395325,23374638,23368792	23395505,23374764,23373837	Gene ID= ENSG00000167232.13 TPM= 1.93 Transcript Type= NA
chr19	27730267	27793924	27730267	27793924	-	transcript3103.chr19.nnic@LINC00662	transcript3103.chr19.nnic	lincRNA	27793532,27793000,27746098,27732796,27730267	27793924,27793232,27746340,27732967,27730707	Gene ID= ENSG00000261824.6 TPM= 3.86 Transcript Type= NA
chr19	27793494	27806782	27793494	27806782	+	ENST00000590628.1@AC006504.5	ENST00000590628.1	lincRNA	27793494,27805605	27793650,27806782	Gene ID= ENSG00000267575.6 TPM= 2.9 Transcript Type= lincRNA
chr19	29205321	29213541	29205321	29213541	-	ENST00000304863.5@UQCRFS1	ENST00000304863.5	protein_coding	29212905,29205321	29213541,29208158	Gene ID= ENSG00000169021.5 TPM= 409.29 Transcript Type= protein_coding
chr19	29604017	29615800	29604017	29615800	+	ENST00000585603.5@POP4	ENST00000585603.5	protein_coding	29604017,29608657,29610409,29611862,29612117,29613871,29615244	29606325,29608709,29610632,29611939,29612178,29613972,29615800	Gene ID= ENSG00000105171.9 TPM= 27.99 Transcript Type= protein_coding
chr19	29665441	29675477	29665441	29675477	+	transcript3127.chr19.nnic@PLEKHF1	transcript3127.chr19.nnic	protein_coding	29665441,29666891,29673824	29665505,29667180,29675477	Gene ID= ENSG00000166289.5 TPM= 24.33 Transcript Type= NA
chr19	29665456	29675477	29665456	29675477	+	transcript3129.chr19.nnic@PLEKHF1	transcript3129.chr19.nnic	protein_coding	29665456,29666891,29673824	29665795,29667180,29675477	Gene ID= ENSG00000166289.5 TPM= 21.43 Transcript Type= NA
chr19	29665056	29675457	29665056	29675457	+	ENST00000436066.3@PLEKHF1	ENST00000436066.3	protein_coding	29665056,29673824	29665505,29675457	Gene ID= ENSG00000166289.5 TPM= 380.53 Transcript Type= protein_coding
chr19	29665456	29668733	29665456	29668733	+	transcript3137.chr19.nnic@NA	transcript3137.chr19.nnic	NA	29665456	29668733	Gene ID= novel_gene_chr19_3138 TPM= 4.83 Transcript Type= NA
chr19	29679265	29680876	29679265	29680876	-	transcript3141.chr19.nnic@NA	transcript3141.chr19.nnic	NA	29679265	29680876	Gene ID= novel_gene_chr19_3142 TPM= 1.93 Transcript Type= NA
chr19	29701163	29715221	29701163	29715221	-	ENST00000392276.1@C19orf12	ENST00000392276.1	protein_coding	29715125,29701163	29715221,29702977	Gene ID= ENSG00000131943.17 TPM= 50.2 Transcript Type= protein_coding
chr19	29811975	29824308	29811975	29824308	+	transcript3172.chr19.nnic@CCNE1	transcript3172.chr19.nnic	protein_coding	29811975,29812689,29812969,29817137,29817406,29820702,29821722,29821996,29822240,29822446,29823655	29812152,29812776,29813037,29817282,29817541,29820848,29821817,29822130,29822351,29822603,29824308	Gene ID= ENSG00000105173.13 TPM= 1.93 Transcript Type= NA
chr19	29942218	30015704	29942218	30015704	+	transcript3173.chr19.nnic@URI1	transcript3173.chr19.nnic	protein_coding	29942218,29971193,29985223,29986282,30004405,30005361,30005651,30007470,30009005,30011094,30012285,30014887	29942664,29971227,29985301,29986417,30004556,30005452,30005708,30007638,30009353,30011236,30012531,30015704	Gene ID= ENSG00000105176.17 TPM= 1.93 Transcript Type= NA
chr19	29942218	30015695	29942218	30015695	+	transcript3177.chr19.nic@URI1	transcript3177.chr19.nic	protein_coding	29942218,29971193,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30015536	29942664,29971227,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30015695	Gene ID= ENSG00000105176.17 TPM= 8.69 Transcript Type= NA
chr19	29942456	30014305	29942456	30014305	+	transcript3182.chr19.nic@URI1	transcript3182.chr19.nic	protein_coding	29942456,29971193,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285	29942664,29971227,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30014305	Gene ID= ENSG00000105176.17 TPM= 1.93 Transcript Type= NA
chr19	29942218	30015704	29942218	30015704	+	transcript3184.chr19.nnic@URI1	transcript3184.chr19.nnic	protein_coding	29942218,29971193,30005361,30005651,30007470,30009005,30011094,30012285,30014887	29942664,29971227,30005452,30005708,30007638,30009353,30011236,30012531,30015704	Gene ID= ENSG00000105176.17 TPM= 1.93 Transcript Type= NA
chr19	29942261	30015704	29942261	30015704	+	ENST00000574110.5@URI1	ENST00000574110.5	protein_coding	29942261,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30014887	29942664,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30015704	Gene ID= ENSG00000105176.17 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr19	32345594	32387667	32345594	32387667	+	ENST00000311921.8@ZNF507	ENST00000311921.8	protein_coding	32345594,32352829,32356616,32360504,32382467,32382717	32345783,32354957,32356733,32360618,32382601,32387667	Gene ID= ENSG00000168813.16 TPM= 2.9 Transcript Type= protein_coding
chr19	32405702	32413187	32405702	32413187	+	transcript3192.chr19.nic@DPY19L3	transcript3192.chr19.nic	protein_coding	32405702,32408217,32411239	32406302,32408356,32413187	Gene ID= ENSG00000178904.18 TPM= 1.93 Transcript Type= NA
chr19	32581068	32587427	32581068	32587427	+	ENST00000590247.6@PDCD5	ENST00000590247.6	protein_coding	32581068,32582195,32584950,32585816,32586858,32587253	32581327,32582232,32585011,32585907,32586929,32587427	Gene ID= ENSG00000105185.11 TPM= 76.26 Transcript Type= protein_coding
chr19	32581209	32587416	32581209	32587416	+	transcript3197.chr19.nic@PDCD5	transcript3197.chr19.nic	protein_coding	32581209,32582195	32581327,32587416	Gene ID= ENSG00000105185.11 TPM= 4.83 Transcript Type= NA
chr19	32581202	32587425	32581202	32587425	+	ENST00000221784.8@PDCD5	ENST00000221784.8	protein_coding	32581202,32582195,32584955,32585816,32586858,32587253	32581327,32582232,32585011,32585907,32586929,32587425	Gene ID= ENSG00000105185.11 TPM= 13.51 Transcript Type= nonsense_mediated_decay
chr19	32597007	32675215	32597007	32675215	-	transcript3200.chr19.nic@ANKRD27	transcript3200.chr19.nic	protein_coding	32675071,32658914,32649682,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597007	32675215,32659045,32649792,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378	Gene ID= ENSG00000105186.15 TPM= 3.86 Transcript Type= NA
chr19	32597007	32675199	32597007	32675199	-	ENST00000306065.8@ANKRD27	ENST00000306065.8	protein_coding	32675071,32658914,32649682,32646459,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597007	32675199,32659045,32649792,32646615,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378	Gene ID= ENSG00000105186.15 TPM= 64.68 Transcript Type= protein_coding
chr19	32637300	32675169	32637300	32675169	-	ENST00000587352.5@ANKRD27	ENST00000587352.5	protein_coding	32675071,32658914,32649682,32646459,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32637300	32675169,32659045,32649792,32646615,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488	Gene ID= ENSG00000105186.15 TPM= 1.93 Transcript Type= protein_coding
chr19	32675865	32678176	32675865	32678176	+	transcript3212.chr19.nnic@NA	transcript3212.chr19.nnic	NA	32675865	32678176	Gene ID= novel_gene_chr19_3213 TPM= 22.2 Transcript Type= NA
chr19	32691961	32713796	32691961	32713796	+	ENST00000397061.3@NUDT19	ENST00000397061.3	protein_coding	32691961,32709185,32711752	32692674,32709392,32713796	Gene ID= ENSG00000213965.3 TPM= 18.34 Transcript Type= protein_coding
chr19	32968909	32971991	32968909	32971991	-	ENST00000591863.1@CEP89	ENST00000591863.1	protein_coding	32971836,32968909	32971991,32971655	Gene ID= ENSG00000121289.17 TPM= 8.69 Transcript Type= protein_coding
chr19	33080880	33130542	33080880	33130542	+	ENST00000170564.6@GPATCH1	ENST00000170564.6	protein_coding	33080880,33088134,33090780,33093359,33094172,33095762,33096207,33097755,33101495,33106695,33109717,33111724,33112486,33113767,33114253,33117825,33119010,33125105,33126588,33130130	33081266,33088268,33090865,33093519,33094269,33095820,33096446,33097902,33101574,33106899,33110016,33111902,33112613,33113903,33114419,33118041,33119117,33125202,33126733,33130542	Gene ID= ENSG00000076650.6 TPM= 2.9 Transcript Type= protein_coding
chr19	33194262	33207639	33194262	33207639	+	transcript3234.chr19.nnic@LRP3	transcript3234.chr19.nnic	protein_coding	33194262,33196730,33202848,33204638,33205246,33206556,33206988	33194858,33196777,33202986,33204852,33206362,33206733,33207639	Gene ID= ENSG00000130881.13 TPM= 22.2 Transcript Type= NA
chr19	33207129	33207639	33207129	33207639	+	ENST00000609744.1@AC008738.7	ENST00000609744.1	3prime_overlapping_ncRNA	33207129	33207639	Gene ID= ENSG00000273420.1 TPM= 4.83 Transcript Type= 3prime_overlapping_ncRNA
chr19	33299934	33302564	33299934	33302564	-	ENST00000498907.2@CEBPA	ENST00000498907.2	protein_coding	33299934	33302564	Gene ID= ENSG00000245848.2 TPM= 51.16 Transcript Type= protein_coding
chr19	33302857	33305054	33302857	33305054	+	ENST00000592982.2@CEBPA-AS1	ENST00000592982.2	antisense_RNA	33302857	33305054	Gene ID= ENSG00000267296.2 TPM= 5.79 Transcript Type= antisense_RNA
chr19	33373330	33382686	33373330	33382686	+	ENST00000284000.8@CEBPG	ENST00000284000.8	protein_coding	33373330,33379144	33373895,33382686	Gene ID= ENSG00000153879.8 TPM= 74.33 Transcript Type= protein_coding
chr19	33386950	33521794	33386950	33521794	-	ENST00000244137.11@PEPD	ENST00000244137.11	protein_coding	33521744,33512593,33511028,33500938,33493290,33489996,33478046,33463987,33462995,33413575,33411672,33401721,33391295,33387890,33386950	33521794,33512776,33511155,33501001,33493337,33490057,33478090,33464062,33463041,33413643,33411749,33401869,33391479,33388081,33387481	Gene ID= ENSG00000124299.13 TPM= 110.53 Transcript Type= protein_coding
chr19	33386980	33521791	33386980	33521791	-	ENST00000397032.8@PEPD	ENST00000397032.8	protein_coding	33521744,33512593,33511028,33500938,33493290,33489996,33478046,33413575,33411672,33401721,33391295,33387890,33386980	33521791,33512776,33511155,33501001,33493337,33490057,33478090,33413643,33411749,33401869,33391479,33388081,33387481	Gene ID= ENSG00000124299.13 TPM= 3.38 Transcript Type= protein_coding
chr19	33796951	33815223	33796951	33815223	+	transcript3261.chr19.nic@KCTD15	transcript3261.chr19.nic	protein_coding	33796951,33798668,33800428,33801167,33806863,33811247,33812790	33796987,33798766,33800520,33801342,33807007,33811552,33815223	Gene ID= ENSG00000153885.14 TPM= 1.93 Transcript Type= NA
chr19	34172516	34229288	34172516	34229288	+	transcript3275.chr19.nic@LSM14A	transcript3275.chr19.nic	protein_coding	34172516,34194478,34196634,34208929,34215596,34219391,34219706,34221507,34226408,34227365	34172763,34194641,34196763,34209051,34215661,34219573,34219877,34221738,34226464,34229288	Gene ID= ENSG00000257103.8 TPM= 7.48 Transcript Type= NA
chr19	34172568	34229288	34172568	34229288	+	ENST00000433627.9@LSM14A	ENST00000433627.9	protein_coding	34172568,34194478,34196634,34208929,34215124,34215596,34219391,34219706,34221507,34226408,34227365	34172763,34194641,34196763,34209051,34215300,34215661,34219573,34219877,34221738,34226464,34229288	Gene ID= ENSG00000257103.8 TPM= 24.62 Transcript Type= protein_coding
chr19	34254537	34355586	34254537	34355586	+	ENST00000299505.6@KIAA0355	ENST00000299505.6	protein_coding	34254537,34299679,34319907,34327421,34327771,34327990,34330189,34333704,34339867,34341422,34347877,34349016,34351514,34352647	34254614,34300968,34320116,34327561,34327866,34328151,34330347,34333801,34339992,34342455,34348042,34349153,34351592,34355586	Gene ID= ENSG00000166398.12 TPM= 7.72 Transcript Type= protein_coding
chr19	34364982	34400335	34364982	34400335	+	ENST00000588991.6@GPI	ENST00000588991.6	protein_coding	34364982,34365260,34366345,34366783,34368583,34377503,34377735,34378934,34379518,34381466,34393248,34393728,34393914,34396301,34396581,34399207,34399556,34399719,34399901	34365019,34365388,34366435,34366851,34368702,34377586,34377881,34379005,34379562,34381519,34393308,34393771,34394066,34396430,34396657,34399335,34399631,34399785,34400335	Gene ID= ENSG00000105220.14 TPM= 24.62 Transcript Type= protein_coding
chr19	34365026	34400328	34365026	34400328	+	ENST00000356487.9@GPI	ENST00000356487.9	protein_coding	34365026,34366345,34366783,34368583,34377503,34377735,34378934,34379518,34381466,34393248,34393728,34393914,34396301,34396581,34399207,34399556,34399719,34399901	34365388,34366435,34366851,34368702,34377586,34377881,34379005,34379562,34381519,34393308,34393771,34394066,34396430,34396657,34399335,34399631,34399785,34400328	Gene ID= ENSG00000105220.14 TPM= 194.51 Transcript Type= protein_coding
chr19	34400853	34402413	34400853	34402413	+	transcript3304.chr19.nnic@NA	transcript3304.chr19.nnic	NA	34400853	34402413	Gene ID= novel_gene_chr19_3305 TPM= 29.92 Transcript Type= NA
chr19	34404384	34426167	34404384	34426167	+	ENST00000246535.3@PDCD2L	ENST00000246535.3	protein_coding	34404384,34404649,34404930,34409161,34413737,34421519,34425990	34404538,34404815,34404990,34409510,34413847,34421667,34426167	Gene ID= ENSG00000126249.7 TPM= 7.72 Transcript Type= protein_coding
chr19	34428356	34469890	34428356	34469890	+	transcript3307.chr19.nic@UBA2	transcript3307.chr19.nic	protein_coding	34428356,34430093,34430576,34431861,34433348,34434868,34438645,34443844,34445000,34450265,34451981,34454260,34454444,34458769,34460470,34464026,34466878,34469040	34428570,34430186,34430659,34431931,34433412,34434968,34438766,34443911,34445121,34450364,34452147,34454353,34454556,34458924,34460566,34464131,34467014,34469890	Gene ID= ENSG00000126261.12 TPM= 47.23 Transcript Type= NA
chr19	34428344	34469890	34428344	34469890	+	transcript3315.chr19.nnic@UBA2	transcript3315.chr19.nnic	protein_coding	34428344,34430576,34431861,34433348,34434868,34438645,34443844,34445000,34450265,34451981,34454260,34454444,34458769,34464026,34466878,34469040	34428570,34430659,34431931,34433412,34434968,34438766,34443911,34445121,34450364,34452147,34454353,34454556,34458924,34464131,34467014,34469890	Gene ID= ENSG00000126261.12 TPM= 7.34 Transcript Type= NA
chr19	34428356	34469890	34428356	34469890	+	transcript3322.chr19.nic@UBA2	transcript3322.chr19.nic	protein_coding	34428356,34431861,34433348,34434868,34438645,34443844,34445000,34450265,34451981,34454260,34454444,34458769,34460470,34464026,34466878,34469040	34428570,34431931,34433412,34434968,34438766,34443911,34445121,34450364,34452147,34454353,34454556,34458924,34460566,34464131,34467014,34469890	Gene ID= ENSG00000126261.12 TPM= 14.41 Transcript Type= NA
chr19	34481722	34501168	34481722	34501168	+	transcript3334.chr19.nnic@WTIP	transcript3334.chr19.nnic	protein_coding	34481722,34483030,34490376,34493037,34493263,34493492,34494586,34495703,34500129	34482641,34483147,34490477,34493104,34493325,34493622,34494637,34495771,34501168	Gene ID= ENSG00000142279.12 TPM= 2.9 Transcript Type= NA
chr19	34677639	34685237	34677639	34685237	+	ENST00000627982.2@ZNF302	ENST00000627982.2	protein_coding	34677639,34678737,34682777,34683152,34683992,34684192,34684308	34677856,34678813,34682897,34683238,34684169,34684303,34685237	Gene ID= ENSG00000089335.20 TPM= 4.83 Transcript Type= protein_coding
chr19	34677672	34686396	34677672	34686396	+	transcript3348.chr19.nic@ZNF302	transcript3348.chr19.nic	protein_coding	34677672,34678737,34682777,34683155,34683992	34677833,34678813,34682897,34683238,34686396	Gene ID= ENSG00000089335.20 TPM= 5.07 Transcript Type= NA
chr19	34677662	34686397	34677662	34686397	+	ENST00000457781.6@ZNF302	ENST00000457781.6	protein_coding	34677662,34678737,34682777,34683155,34684252	34677833,34678813,34682897,34683238,34686397	Gene ID= ENSG00000089335.20 TPM= 6.03 Transcript Type= protein_coding
chr19	34677678	34686392	34677678	34686392	+	ENST00000505242.5@ZNF302	ENST00000505242.5	protein_coding	34677678,34678737,34682777,34683155,34684252	34678103,34678813,34682897,34683238,34686392	Gene ID= ENSG00000089335.20 TPM= 4.1 Transcript Type= protein_coding
chr19	34677654	34684172	34677654	34684172	+	ENST00000506901.5@ZNF302	ENST00000506901.5	protein_coding	34677654,34678737,34682777,34683152,34683992	34677862,34678813,34682897,34683238,34684172	Gene ID= ENSG00000089335.20 TPM= 5.79 Transcript Type= protein_coding
chr19	34677689	34686391	34677689	34686391	+	ENST00000423823.6@ZNF302	ENST00000423823.6	protein_coding	34677689,34678737,34682777,34683155,34684252	34677856,34678813,34682897,34683238,34686391	Gene ID= ENSG00000089335.20 TPM= 16.65 Transcript Type= protein_coding
chr19	34733298	34733837	34733298	34733837	-	ENST00000612269.1@AC020910.4	ENST00000612269.1	lincRNA	34733298	34733837	Gene ID= ENSG00000274104.1 TPM= 1.93 Transcript Type= lincRNA
chr19	34734165	34742872	34734165	34742872	+	transcript3362.chr19.nic@ZNF181	transcript3362.chr19.nic	protein_coding	34734165,34734970,34739148,34739523,34740611	34734360,34735046,34739268,34739621,34742872	Gene ID= ENSG00000197841.14 TPM= 16.89 Transcript Type= NA
chr19	34766968	34773200	34766968	34773200	-	ENST00000588760.1@ZNF599	ENST00000588760.1	protein_coding	34772824,34769429,34766968	34773200,34769555,34767411	Gene ID= ENSG00000153896.17 TPM= 1.93 Transcript Type= protein_coding
chr19	34926980	34945168	34926980	34945168	+	ENST00000601957.5@ZNF30	ENST00000601957.5	protein_coding	34926980,34929884,34931843,34933628,34942594,34943223	34927216,34929956,34931993,34933723,34942673,34945168	Gene ID= ENSG00000168661.14 TPM= 2.9 Transcript Type= protein_coding
chr19	35000287	35026469	35000287	35026469	+	ENST00000317991.9@GRAMD1A	ENST00000317991.9	protein_coding	35000287,35009119,35009423,35009888,35010092,35010284,35011474,35013256,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35022900,35023236,35023427,35026049	35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013368,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35022038,35022911,35023343,35023547,35026469	Gene ID= ENSG00000089351.14 TPM= 65.96 Transcript Type= protein_coding
chr19	35000323	35026469	35000323	35026469	+	ENST00000600231.5@GRAMD1A	ENST00000600231.5	protein_coding	35000323,35009119,35009423,35009888,35010092,35010284,35011474,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35023236,35023427,35026049	35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35022038,35023343,35023547,35026469	Gene ID= ENSG00000089351.14 TPM= 24.78 Transcript Type= nonsense_mediated_decay
chr19	35030393	35040449	35030393	35040449	+	transcript3401.chr19.nnic@SCN1B	transcript3401.chr19.nnic	protein_coding	35030393,35032528,35033499,35039117,35039635,35039797,35040086	35030860,35032694,35033739,35039258,35039706,35040014,35040449	Gene ID= ENSG00000105711.11 TPM= 213.6 Transcript Type= NA
chr19	35030466	35040449	35030466	35040449	+	ENST00000262631.10@SCN1B	ENST00000262631.10	protein_coding	35030466,35032528,35033499,35039117,35039635,35039797	35030860,35032694,35033739,35039258,35039706,35040449	Gene ID= ENSG00000105711.11 TPM= 507.54 Transcript Type= protein_coding
chr19	35041327	35066571	35041327	35066571	+	transcript3413.chr19.nic@HPN	transcript3413.chr19.nic	protein_coding	35041327,35042453,35049290,35049475,35059673,35059874,35060129,35060347,35060627,35065250,35065539,35065868,35066249	35041872,35042522,35049391,35049516,35059802,35059996,35060169,35060512,35060817,35065345,35065681,35066032,35066571	Gene ID= ENSG00000105707.13 TPM= 8.45 Transcript Type= NA
chr19	35041790	35066571	35041790	35066571	+	transcript3418.chr19.nic@HPN	transcript3418.chr19.nic	protein_coding	35041790,35049290,35049475,35059673,35060129,35060347,35060627,35065250,35065539,35065868,35066249	35042522,35049391,35049516,35059996,35060169,35060512,35060817,35065345,35065681,35066032,35066571	Gene ID= ENSG00000105707.13 TPM= 4.1 Transcript Type= NA
chr19	35049110	35066571	35049110	35066571	+	transcript3419.chr19.nic@HPN	transcript3419.chr19.nic	protein_coding	35049110,35049475,35059673,35059874,35060129,35060347,35060627,35065250,35065539,35065868,35066249	35049391,35049516,35059802,35059996,35060169,35060512,35060817,35065345,35065681,35066032,35066571	Gene ID= ENSG00000105707.13 TPM= 3.62 Transcript Type= NA
chr19	35049263	35066571	35049263	35066571	+	transcript3421.chr19.nic@HPN	transcript3421.chr19.nic	protein_coding	35049263,35059673,35059874,35060129,35060347,35060627,35065250,35065539,35065868,35066249	35049516,35059802,35059996,35060169,35060512,35060817,35065345,35065681,35066032,35066571	Gene ID= ENSG00000105707.13 TPM= 4.1 Transcript Type= NA
chr19	35124513	35135009	35124513	35135009	-	transcript3427.chr19.nic@LGI4	transcript3427.chr19.nic	protein_coding	35134511,35134033,35133693,35133318,35131971,35131789,35131386,35126853,35126270,35124513	35135009,35134104,35133764,35133444,35132042,35131860,35131555,35127017,35126775,35125507	Gene ID= ENSG00000153902.13 TPM= 5.96 Transcript Type= NA
chr19	35124513	35135200	35124513	35135200	-	ENST00000310123.7@LGI4	ENST00000310123.7	protein_coding	35134511,35134033,35133693,35131971,35131789,35131386,35126853,35126270,35124513	35135200,35134104,35133764,35132042,35131860,35131555,35127017,35126775,35125507	Gene ID= ENSG00000153902.13 TPM= 9.82 Transcript Type= protein_coding
chr19	35124513	35135200	35124513	35135200	-	ENST00000392225.7@LGI4	ENST00000392225.7	protein_coding	35134511,35134033,35133693,35131971,35131789,35131386,35126270,35124513	35135200,35134104,35133764,35132042,35131860,35131555,35127017,35125507	Gene ID= ENSG00000153902.13 TPM= 3.54 Transcript Type= protein_coding
chr19	35139441	35143050	35139441	35143050	+	ENST00000455515.6@FXYD1	ENST00000455515.6	protein_coding	35139441,35140076,35140597,35141132,35141536,35142472,35142720,35142917	35139588,35140140,35140629,35141206,35141572,35142521,35142771,35143050	Gene ID= ENSG00000266964.5 TPM= 14.07 Transcript Type= protein_coding
chr19	35138717	35143050	35138717	35143050	+	transcript3444.chr19.nic@FXYD1	transcript3444.chr19.nic	protein_coding	35138717,35140076,35140597,35141132,35141536,35142472,35142720	35138894,35140140,35140629,35141206,35141572,35142521,35143050	Gene ID= ENSG00000266964.5 TPM= 27.9 Transcript Type= NA
chr19	35139634	35143050	35139634	35143050	+	transcript3448.chr19.nic@FXYD1	transcript3448.chr19.nic	protein_coding	35139634,35140076,35140597,35141132,35141536,35142472,35142720	35139767,35140140,35140629,35141206,35141572,35142521,35143050	Gene ID= ENSG00000266964.5 TPM= 20.18 Transcript Type= NA
chr19	35139726	35143048	35139726	35143048	+	ENST00000588715.5@FXYD1	ENST00000588715.5	protein_coding	35139726,35140076,35140597,35141132,35141536,35142472,35142720,35142917	35139767,35140140,35140629,35141206,35141572,35142521,35142771,35143048	Gene ID= ENSG00000266964.5 TPM= 31.4 Transcript Type= protein_coding
chr19	35138993	35143054	35138993	35143054	+	ENST00000612146.4@FXYD1	ENST00000612146.4	protein_coding	35138993,35140076,35140597,35141132,35141536,35142472,35142720,35142917	35139232,35140140,35140629,35141206,35141572,35142521,35142771,35143054	Gene ID= ENSG00000266964.5 TPM= 18.57 Transcript Type= protein_coding
chr19	35139738	35143036	35139738	35143036	+	ENST00000588607.5@FXYD1	ENST00000588607.5	protein_coding	35139738,35139919,35140597,35141132,35141536,35142472,35142720,35142917	35139767,35140140,35140629,35141206,35141572,35142521,35142771,35143036	Gene ID= ENSG00000266964.5 TPM= 4.58 Transcript Type= protein_coding
chr19	35154743	35169883	35154743	35169883	+	ENST00000392219.6@FXYD5	ENST00000392219.6	protein_coding	35154743,35155551,35157421,35158344,35160709,35164156,35166142,35166251,35169566	35154809,35155611,35157501,35158400,35160801,35164245,35166171,35166325,35169883	Gene ID= ENSG00000089327.14 TPM= 3.86 Transcript Type= protein_coding
chr19	35248392	35267962	35248392	35267962	+	ENST00000602122.5@LSR	ENST00000602122.5	protein_coding	35248392,35250315,35258945,35262546,35266359,35266679,35266839,35267109,35267824	35249131,35250659,35259064,35262692,35266532,35266738,35266967,35267734,35267962	Gene ID= ENSG00000105699.16 TPM= 8.69 Transcript Type= protein_coding
chr19	35269065	35279812	35269065	35279812	+	ENST00000222305.7@USF2	ENST00000222305.7	protein_coding	35269065,35269446,35269581,35269803,35270447,35270718,35271083,35278698,35278946,35279167	35269163,35269492,35269699,35270003,35270597,35270805,35271141,35278792,35279074,35279812	Gene ID= ENSG00000105698.15 TPM= 83.02 Transcript Type= protein_coding
chr19	35329187	35347355	35329187	35347355	+	ENST00000085219.9@CD22	ENST00000085219.9	protein_coding	35329187,35332019,35332547,35336036,35337755,35338168,35340881,35341343,35341702,35344829,35345051,35345602,35346151,35346566	35329230,35332074,35332924,35336341,35338021,35338431,35341138,35341606,35341965,35344925,35345126,35345720,35346235,35347355	Gene ID= ENSG00000012124.16 TPM= 2.9 Transcript Type= protein_coding
chr19	35545595	35547526	35545595	35547526	+	ENST00000222284.9@TMEM147	ENST00000222284.9	protein_coding	35545595,35545888,35546526,35546672,35546945,35547119,35547324	35545816,35545957,35546585,35546808,35547029,35547240,35547526	Gene ID= ENSG00000105677.11 TPM= 136.11 Transcript Type= protein_coding
chr19	35545630	35547526	35545630	35547526	+	ENST00000392204.6@TMEM147	ENST00000392204.6	protein_coding	35545630,35546526,35546672,35546945,35547119,35547324	35545957,35546585,35546808,35547029,35547240,35547526	Gene ID= ENSG00000105677.11 TPM= 23.17 Transcript Type= protein_coding
chr19	35629035	35637686	35629035	35637686	+	transcript3484.chr19.nnic@RBM42	transcript3484.chr19.nnic	protein_coding	35629035,35629520,35631140,35631331,35632936,35633098,35633687,35634256,35637158,35637442	35629281,35629673,35631224,35631405,35633001,35633252,35634019,35634373,35637352,35637686	Gene ID= ENSG00000126254.11 TPM= 23.17 Transcript Type= NA
chr19	35629030	35637686	35629030	35637686	+	ENST00000588161.5@RBM42	ENST00000588161.5	protein_coding	35629030,35629520,35631140,35631331,35633101,35633687,35634256,35637158,35637442	35629281,35629673,35631224,35631405,35633252,35634019,35634373,35637352,35637686	Gene ID= ENSG00000126254.11 TPM= 53.09 Transcript Type= protein_coding
chr19	35629049	35637686	35629049	35637686	+	ENST00000262633.8@RBM42	ENST00000262633.8	protein_coding	35629049,35629520,35631140,35631331,35632936,35633077,35633687,35634256,35637158,35637442	35629281,35629673,35631224,35631405,35633001,35633252,35634019,35634373,35637352,35637686	Gene ID= ENSG00000126254.11 TPM= 97.5 Transcript Type= protein_coding
chr19	35648223	35658861	35648223	35658861	+	ENST00000246554.7@COX6B1	ENST00000246554.7	protein_coding	35648223,35651233,35654571,35658594	35648403,35651349,35654671,35658861	Gene ID= ENSG00000126267.8 TPM= 362.96 Transcript Type= protein_coding
chr19	35717992	35720439	35717992	35720439	+	transcript3498.chr19.nic@KMT2B	transcript3498.chr19.nic	protein_coding	35717992,35719469,35719784	35718381,35719541,35720439	Gene ID= ENSG00000272333.5 TPM= 2.9 Transcript Type= NA
chr19	35718019	35738878	35718019	35738878	+	ENST00000420124.2@KMT2B	ENST00000420124.2	protein_coding	35718019,35719469,35719784,35722359,35722568,35722995,35723447,35723732,35724637,35724989,35725220,35725479,35725723,35726236,35727156,35727438,35727698,35727881,35728098,35728774,35728985,35729159,35729967,35730342,35730538,35730707,35731908,35732215,35733597,35733763,35736690,35736912,35737086,35737636,35737859,35738062,35738282	35718381,35719541,35721804,35722472,35722718,35723274,35723502,35724007,35724731,35725087,35725333,35725625,35725818,35726353,35727269,35727622,35727787,35727985,35728171,35728889,35729076,35729296,35730125,35730462,35730616,35730867,35732135,35733508,35733686,35733872,35736827,35736986,35737263,35737743,35737942,35738191,35738878	Gene ID= ENSG00000272333.5 TPM= 19.31 Transcript Type= protein_coding
chr19	35733170	35738878	35733170	35738878	+	transcript3502.chr19.nic@KMT2B	transcript3502.chr19.nic	protein_coding	35733170,35733763,35736690,35736912,35737086,35737636,35737859,35738062,35738282	35733686,35733872,35736827,35736986,35737263,35737743,35737942,35738191,35738878	Gene ID= ENSG00000272333.5 TPM= 5.79 Transcript Type= NA
chr19	35722005	35723650	35722005	35723650	-	transcript3524.chr19.nnic@NA	transcript3524.chr19.nnic	NA	35722005	35723650	Gene ID= novel_gene_chr19_3525 TPM= 1.93 Transcript Type= NA
chr19	35738809	35740516	35738809	35740516	-	transcript3522.chr19.nnic@IGFLR1	transcript3522.chr19.nnic	protein_coding	35740380,35738809	35740516,35739626	Gene ID= ENSG00000126246.9 TPM= 3.86 Transcript Type= NA
chr19	35739242	35740653	35739242	35740653	-	transcript3523.chr19.nnic@IGFLR1	transcript3523.chr19.nnic	protein_coding	35740380,35739242	35740653,35739626	Gene ID= ENSG00000126246.9 TPM= 6.76 Transcript Type= NA
chr19	35739252	35740572	35739252	35740572	-	transcript3520.chr19.nic@AD000671.2	transcript3520.chr19.nic	protein_coding	35740380,35739710,35739252	35740572,35740088,35739626	Gene ID= ENSG00000267120.3 TPM= 5.79 Transcript Type= NA
chr19	35742531	35745432	35742531	35745432	-	transcript3507.chr19.nic@U2AF1L4	transcript3507.chr19.nic	protein_coding	35745348,35745125,35744626,35744323,35744070,35743809,35742531	35745432,35745212,35744692,35744421,35744145,35743904,35742803	Gene ID= ENSG00000161265.14 TPM= 2.58 Transcript Type= NA
chr19	35742532	35745445	35742532	35745445	-	ENST00000292879.9@U2AF1L4	ENST00000292879.9	protein_coding	35745348,35745125,35744323,35744070,35743809,35742532	35745445,35745212,35744421,35744145,35743904,35742803	Gene ID= ENSG00000161265.14 TPM= 6.44 Transcript Type= protein_coding
chr19	35742531	35745419	35742531	35745419	-	transcript3514.chr19.nic@U2AF1L4	transcript3514.chr19.nic	protein_coding	35745348,35744323,35744070,35743809,35742531	35745419,35745187,35744145,35743904,35742803	Gene ID= ENSG00000161265.14 TPM= 2.9 Transcript Type= NA
chr19	35742531	35745419	35742531	35745419	-	transcript3515.chr19.nic@U2AF1L4	transcript3515.chr19.nic	protein_coding	35745348,35745125,35744070,35743809,35742531	35745419,35745187,35744421,35743904,35742803	Gene ID= ENSG00000161265.14 TPM= 2.58 Transcript Type= NA
chr19	35745591	35747002	35745591	35747002	+	transcript3527.chr19.nnic@PSENEN	transcript3527.chr19.nnic	protein_coding	35745591,35745835,35746419,35746708,35746921	35745700,35745991,35746523,35746763,35747002	Gene ID= ENSG00000205155.7 TPM= 1.93 Transcript Type= NA
chr19	35745114	35747519	35745114	35747519	+	ENST00000587708.6@PSENEN	ENST00000587708.6	protein_coding	35745114,35745835,35746419,35746708	35745700,35745991,35746523,35747519	Gene ID= ENSG00000205155.7 TPM= 27.99 Transcript Type= protein_coding
chr19	35745619	35747004	35745619	35747004	+	ENST00000222266.2@PSENEN	ENST00000222266.2	protein_coding	35745619,35745873,35746419,35746708	35745700,35745991,35746523,35747004	Gene ID= ENSG00000205155.7 TPM= 3.86 Transcript Type= protein_coding
chr19	35745600	35746993	35745600	35746993	+	ENST00000591949.1@PSENEN	ENST00000591949.1	protein_coding	35745600,35745835,35746419	35745700,35745991,35746993	Gene ID= ENSG00000205155.7 TPM= 1.93 Transcript Type= protein_coding
chr19	35748555	35754519	35748555	35754519	+	transcript3536.chr19.nic@LIN37	transcript3536.chr19.nic	protein_coding	35748555,35752176,35752434,35752804,35752914,35753087,35754017,35754246,35754393	35748758,35752251,35752484,35752833,35752999,35753193,35754157,35754319,35754519	Gene ID= ENSG00000267796.7 TPM= 2.9 Transcript Type= NA
chr19	35748361	35754519	35748361	35754519	+	ENST00000301159.13@LIN37	ENST00000301159.13	protein_coding	35748361,35752176,35752434,35752804,35752914,35753087,35754017,35754246,35754393	35748758,35752251,35752484,35752833,35752999,35753253,35754157,35754319,35754519	Gene ID= ENSG00000267796.7 TPM= 9.65 Transcript Type= protein_coding
chr19	35754569	35757029	35754569	35757029	-	ENST00000004982.5@HSPB6	ENST00000004982.5	protein_coding	35756811,35755772,35754569	35757029,35755894,35755683	Gene ID= ENSG00000004776.12 TPM= 526.09 Transcript Type= protein_coding
chr19	35868445	35879788	35868445	35879788	+	ENST00000221891.8@APLP1	ENST00000221891.8	protein_coding	35868445,35869667,35870896,35871237,35871612,35871858,35872483,35873639,35874504,35874741,35876517,35877718,35878082,35878584,35878890,35879074,35879343	35868783,35869810,35871028,35871349,35871745,35872036,35872613,35873713,35874662,35874869,35876616,35877825,35878108,35878654,35878952,35879217,35879788	Gene ID= ENSG00000105290.11 TPM= 1.93 Transcript Type= protein_coding
chr19	35904401	35908295	35904401	35908295	-	ENST00000587837.5@TYROBP	ENST00000587837.5	protein_coding	35908175,35907730,35907446,35907218,35904401	35908295,35907762,35907580,35907264,35904634	Gene ID= ENSG00000011600.11 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr19	35904403	35908275	35904403	35908275	-	ENST00000544690.6@TYROBP	ENST00000544690.6	protein_coding	35908168,35907446,35907218,35904403	35908275,35907580,35907264,35904634	Gene ID= ENSG00000011600.11 TPM= 2.9 Transcript Type= protein_coding
chr19	35937120	35945193	35937120	35945193	+	ENST00000246529.3@LRFN3	ENST00000246529.3	protein_coding	35937120,35939410,35944548	35937555,35940840,35945193	Gene ID= ENSG00000126243.8 TPM= 7.72 Transcript Type= protein_coding
chr19	35995199	35996315	35995199	35996315	+	ENST00000378887.3@SDHAF1	ENST00000378887.3	protein_coding	35995199	35996315	Gene ID= ENSG00000205138.3 TPM= 59.85 Transcript Type= protein_coding
chr19	36009121	36014219	36009121	36014219	-	transcript3554.chr19.nic@ALKBH6	transcript3554.chr19.nic	protein_coding	36014175,36013344,36013021,36011404,36010894,36010567,36009121	36014219,36013422,36013089,36011464,36011045,36010645,36009553	Gene ID= ENSG00000239382.10 TPM= 2.9 Transcript Type= NA
chr19	36009121	36014219	36009121	36014219	-	transcript3558.chr19.nic@ALKBH6	transcript3558.chr19.nic	protein_coding	36014175,36013344,36013021,36011404,36010567,36009121	36014219,36013422,36013089,36011464,36010683,36009553	Gene ID= ENSG00000239382.10 TPM= 1.93 Transcript Type= NA
chr19	36034985	36054762	36034985	36054762	-	ENST00000292894.1@THAP8	ENST00000292894.1	protein_coding	36054135,36039944,36039323,36034985	36054762,36040136,36039718,36035592	Gene ID= ENSG00000161277.10 TPM= 7.24 Transcript Type= protein_coding
chr19	36034985	36054406	36034985	36054406	-	transcript3566.chr19.nic@THAP8	transcript3566.chr19.nic	protein_coding	36054349,36039944,36039323,36034985	36054406,36040136,36039718,36035592	Gene ID= ENSG00000161277.10 TPM= 3.38 Transcript Type= NA
chr19	36100595	36105103	36100595	36105103	+	transcript3569.chr19.nic@WDR62	transcript3569.chr19.nic	protein_coding	36100595,36101214,36101664,36102014,36102737,36102948,36103156,36103343,36104518,36104768	36100875,36101317,36101774,36102151,36102851,36103074,36103207,36103981,36104675,36105103	Gene ID= ENSG00000075702.16 TPM= 12.55 Transcript Type= NA
chr19	36101005	36105103	36101005	36105103	+	transcript3573.chr19.nnic@WDR62	transcript3573.chr19.nnic	protein_coding	36101005,36101214,36101664,36102014,36102737,36102948,36103156,36103343,36104518,36104768	36101035,36101317,36101774,36102151,36102851,36103074,36103207,36103981,36104675,36105103	Gene ID= ENSG00000075702.16 TPM= 8.69 Transcript Type= NA
chr19	36113710	36115346	36113710	36115346	-	ENST00000221859.8@POLR2I	ENST00000221859.8	protein_coding	36114798,36114659,36114339,36114177,36114015,36113710	36115346,36114713,36114412,36114251,36114066,36113817	Gene ID= ENSG00000105258.8 TPM= 109.4 Transcript Type= protein_coding
chr19	36113710	36114891	36113710	36114891	-	ENST00000589591.5@POLR2I	ENST00000589591.5	protein_coding	36114659,36114339,36114177,36114015,36113710	36114891,36114412,36114251,36114066,36113817	Gene ID= ENSG00000105258.8 TPM= 8.04 Transcript Type= retained_intron
chr19	36113714	36114860	36113714	36114860	-	ENST00000585842.5@POLR2I	ENST00000585842.5	protein_coding	36114798,36114339,36114177,36114015,36113714	36114860,36114412,36114251,36114066,36113817	Gene ID= ENSG00000105258.8 TPM= 4.18 Transcript Type= nonsense_mediated_decay
chr19	36113716	36114906	36113716	36114906	-	ENST00000592962.5@POLR2I	ENST00000592962.5	protein_coding	36114798,36114659,36114339,36114151,36114015,36113716	36114906,36114713,36114412,36114251,36114066,36113817	Gene ID= ENSG00000105258.8 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr19	36115468	36125945	36115468	36125945	+	transcript3575.chr19.nnic@TBCB	transcript3575.chr19.nnic	protein_coding	36115468,36116041,36120710,36121527,36124250,36125451,36125668	36115674,36116184,36120806,36121718,36124363,36125523,36125945	Gene ID= ENSG00000105254.11 TPM= 7.24 Transcript Type= NA
chr19	36114986	36125945	36114986	36125945	+	ENST00000221855.7@TBCB	ENST00000221855.7	protein_coding	36114986,36116041,36120710,36121527,36125451,36125668	36115674,36116184,36120806,36121718,36125523,36125945	Gene ID= ENSG00000105254.11 TPM= 72.88 Transcript Type= protein_coding
chr19	36139575	36150352	36139575	36150352	+	ENST00000246533.7@CAPNS1	ENST00000246533.7	protein_coding	36139575,36140997,36142300,36142652,36142909,36143064,36145806,36145976,36146196,36149578,36149813	36140157,36141220,36142333,36142741,36142966,36143128,36145874,36146054,36146312,36149636,36150352	Gene ID= ENSG00000126247.10 TPM= 163.14 Transcript Type= protein_coding
chr19	36150922	36152869	36150922	36152869	-	ENST00000292907.7@COX7A1	ENST00000292907.7	protein_coding	36152393,36151669,36151462,36150922	36152869,36151755,36151546,36151034	Gene ID= ENSG00000161281.10 TPM= 1674.81 Transcript Type= protein_coding
chr19	36150922	36152447	36150922	36152447	-	transcript3593.chr19.nnic@COX7A1	transcript3593.chr19.nnic	protein_coding	36152393,36151462,36150922	36152447,36151546,36151034	Gene ID= ENSG00000161281.10 TPM= 203.68 Transcript Type= NA
chr19	36150922	36152449	36150922	36152449	-	ENST00000481297.1@COX7A1	ENST00000481297.1	protein_coding	36152393,36151462,36150922	36152449,36151755,36151034	Gene ID= ENSG00000161281.10 TPM= 87.84 Transcript Type= retained_intron
chr19	36215106	36238771	36215106	36238771	+	transcript3597.chr19.nnic@ZNF146	transcript3597.chr19.nnic	protein_coding	36215106,36218122,36225954,36228748,36235659	36215196,36218195,36226073,36228819,36238771	Gene ID= ENSG00000167635.11 TPM= 10.7 Transcript Type= NA
chr19	36214724	36238771	36214724	36238771	+	transcript3602.chr19.nnic@ZNF146	transcript3602.chr19.nnic	protein_coding	36214724,36218122,36228748,36235659	36215155,36218195,36228819,36238771	Gene ID= ENSG00000167635.11 TPM= 15.52 Transcript Type= NA
chr19	36214602	36238771	36214602	36238771	+	ENST00000456324.5@ZNF146	ENST00000456324.5	protein_coding	36214602,36228748,36235659	36215196,36228819,36238771	Gene ID= ENSG00000167635.11 TPM= 28.07 Transcript Type= protein_coding
chr19	36215133	36238774	36215133	36238774	+	ENST00000443387.2@ZNF146	ENST00000443387.2	protein_coding	36215133,36218122,36228748,36235659	36215196,36218195,36228819,36238774	Gene ID= ENSG00000167635.11 TPM= 50.92 Transcript Type= protein_coding
chr19	36324907	36331770	36324907	36331770	-	transcript3614.chr19.nnic@LINC00665	transcript3614.chr19.nnic	lincRNA	36331447,36330253,36324907	36331770,36330492,36325764	Gene ID= ENSG00000232677.6 TPM= 1.93 Transcript Type= NA
chr19	36391960	36418656	36391960	36418656	-	ENST00000392161.3@ZFP82	ENST00000392161.3	protein_coding	36418492,36409781,36407887,36405580,36391960	36418656,36409867,36408013,36405672,36394110	Gene ID= ENSG00000181007.8 TPM= 1.93 Transcript Type= protein_coding
chr19	36511022	36528265	36511022	36528265	-	transcript3627.chr19.nnic@ZNF260	transcript3627.chr19.nnic	protein_coding	36528219,36511022	36528265,36515699	Gene ID= ENSG00000254004.6 TPM= 1.93 Transcript Type= NA
chr19	36605313	36628267	36605313	36628267	+	transcript3632.chr19.nic@ZNF382	transcript3632.chr19.nic	protein_coding	36605313,36607552,36609902,36610650,36626130	36605730,36607622,36610053,36610742,36628267	Gene ID= ENSG00000161298.17 TPM= 1.93 Transcript Type= NA
chr19	36646679	36666831	36646679	36666831	-	transcript3634.chr19.nnic@ZNF461	transcript3634.chr19.nnic	protein_coding	36666690,36664698,36658299,36656448,36646679	36666831,36664786,36658425,36656543,36648151	Gene ID= ENSG00000197808.11 TPM= 1.93 Transcript Type= NA
chr19	36687597	36721326	36687597	36721326	+	transcript3636.chr19.nnic@ZNF567	transcript3636.chr19.nnic	protein_coding	36687597,36689397,36694802,36712386,36712781,36718948	36687634,36689497,36694876,36712512,36712867,36721326	Gene ID= ENSG00000189042.13 TPM= 2.41 Transcript Type= NA
chr19	36689400	36721326	36689400	36721326	+	ENST00000360729.8@ZNF567	ENST00000360729.8	protein_coding	36689400,36712386,36712781,36718948	36689497,36712512,36712867,36721326	Gene ID= ENSG00000189042.13 TPM= 1.45 Transcript Type= protein_coding
chr19	36817428	36838384	36817428	36838384	-	ENST00000356725.8@ZNF790	ENST00000356725.8	protein_coding	36838337,36825611,36823667,36823285,36817428	36838384,36825692,36823790,36823380,36820114	Gene ID= ENSG00000197863.8 TPM= 1.93 Transcript Type= protein_coding
chr19	37078435	37130311	37078435	37130311	+	transcript3652.chr19.nnic@ZNF420	transcript3652.chr19.nnic	protein_coding	37078435,37080345,37085026,37089039,37090995,37127128	37078570,37080388,37085058,37089127,37091121,37130311	Gene ID= ENSG00000197050.10 TPM= 1.93 Transcript Type= NA
chr19	37078435	37130317	37078435	37130317	+	transcript3655.chr19.nnic@ZNF420	transcript3655.chr19.nnic	protein_coding	37078435,37080345,37089039,37090995,37096031,37127128	37078570,37080388,37089127,37091121,37096115,37130317	Gene ID= ENSG00000197050.10 TPM= 4.83 Transcript Type= NA
chr19	37078480	37130311	37078480	37130311	+	ENST00000337995.3@ZNF420	ENST00000337995.3	protein_coding	37078480,37080345,37089039,37090995,37127128	37078570,37080388,37089127,37091121,37130311	Gene ID= ENSG00000197050.10 TPM= 2.9 Transcript Type= protein_coding
chr19	37150082	37172714	37150082	37172714	-	transcript3659.chr19.nnic@ZNF585A	transcript3659.chr19.nnic	protein_coding	37172627,37169839,37156229,37155865,37150082	37172714,37170054,37156355,37155957,37154737	Gene ID= ENSG00000196967.10 TPM= 1.93 Transcript Type= NA
chr19	37165385	37172694	37165385	37172694	-	ENST00000588354.1@ZNF585A	ENST00000588354.1	protein_coding	37172627,37169839,37165385	37172694,37170054,37165696	Gene ID= ENSG00000196967.10 TPM= 3.86 Transcript Type= protein_coding
chr19	37184820	37210559	37184820	37210559	-	transcript3663.chr19.nic@ZNF585B	transcript3663.chr19.nic	protein_coding	37210441,37207040,37198939,37190024,37189661,37184820	37210559,37207254,37199054,37190150,37189753,37187244	Gene ID= ENSG00000245680.9 TPM= 1.93 Transcript Type= NA
chr19	37317902	37364447	37317902	37364447	+	transcript3673.chr19.nic@HKR1	transcript3673.chr19.nic	protein_coding	37317902,37322185,37323533,37324208,37347190,37347777,37362109	37318186,37322232,37323570,37324265,37347316,37347872,37364447	Gene ID= ENSG00000181666.17 TPM= 2.58 Transcript Type= NA
chr19	37317911	37364446	37317911	37364446	+	ENST00000544914.5@HKR1	ENST00000544914.5	protein_coding	37317911,37322185,37323533,37324208,37347777,37362109	37318186,37322232,37323570,37324265,37347872,37364446	Gene ID= ENSG00000181666.17 TPM= 2.58 Transcript Type= protein_coding
chr19	37334666	37364451	37334666	37364451	+	ENST00000392153.7@HKR1	ENST00000392153.7	protein_coding	37334666,37335169,37347190,37347777,37362109	37334782,37335257,37347316,37347872,37364451	Gene ID= ENSG00000181666.17 TPM= 10.3 Transcript Type= protein_coding
chr19	37371161	37390770	37371161	37390770	+	ENST00000436120.6@ZNF527	ENST00000436120.6	protein_coding	37371161,37374158,37379120,37380277,37388306	37371226,37374231,37379246,37380372,37390770	Gene ID= ENSG00000189164.14 TPM= 1.93 Transcript Type= protein_coding
chr19	37696363	37719790	37696363	37719790	-	ENST00000355202.8@ZNF607	ENST00000355202.8	protein_coding	37719269,37711610,37709696,37707914,37696363	37719790,37711692,37709822,37708012,37699895	Gene ID= ENSG00000198182.12 TPM= 3.86 Transcript Type= protein_coding
chr19	38173641	38208372	38173641	38208372	+	transcript3698.chr19.nic@SIPA1L3	transcript3698.chr19.nic	protein_coding	38173641,38182519,38192145,38193537,38198389,38201862,38204127,38206097	38173672,38182740,38192310,38193780,38198532,38201997,38204208,38208372	Gene ID= ENSG00000105738.10 TPM= 7.72 Transcript Type= NA
chr19	38251237	38256591	38251237	38256591	-	ENST00000301242.8@PPP1R14A	ENST00000301242.8	protein_coding	38256139,38252894,38252306,38251237	38256591,38252974,38252338,38251446	Gene ID= ENSG00000167641.10 TPM= 12.55 Transcript Type= protein_coding
chr19	38304161	38305009	38304161	38305009	+	ENST00000301246.9@C19orf33	ENST00000301246.9	protein_coding	38304161,38304375,38304624,38304845	38304283,38304490,38304686,38305009	Gene ID= ENSG00000167644.11 TPM= 3.86 Transcript Type= protein_coding
chr19	38305118	38315963	38305118	38315963	-	ENST00000339413.10@YIF1B	ENST00000339413.10	protein_coding	38315860,38309405,38309224,38308979,38308792,38307597,38307428,38305118	38315963,38309643,38309328,38309057,38308849,38307752,38307521,38305507	Gene ID= ENSG00000167645.16 TPM= 9.65 Transcript Type= protein_coding
chr19	38374536	38383824	38374536	38383824	+	ENST00000215071.8@PSMD8	ENST00000215071.8	protein_coding	38374536,38376160,38376352,38379240,38380899,38382117,38383253	38374961,38376232,38376454,38379405,38380999,38382228,38383824	Gene ID= ENSG00000099341.11 TPM= 852.66 Transcript Type= protein_coding
chr19	38374772	38382254	38374772	38382254	+	ENST00000592561.5@PSMD8	ENST00000592561.5	protein_coding	38374772,38376160,38376352,38379240,38380899,38382117	38374961,38376232,38376454,38379405,38380999,38382254	Gene ID= ENSG00000099341.11 TPM= 4.05 Transcript Type= protein_coding
chr19	38403135	38409084	38403135	38409084	+	ENST00000252530.9@FAM98C	ENST00000252530.9	protein_coding	38403135,38403338,38403560,38404908,38405344,38405519,38406910,38408751	38403218,38403486,38403694,38405113,38405421,38405635,38407077,38409084	Gene ID= ENSG00000130244.12 TPM= 2.9 Transcript Type= protein_coding
chr19	38433699	38587564	38433699	38587564	+	ENST00000355481.8@RYR1	ENST00000355481.8	protein_coding	38433699,38440745,38442349,38443558,38443718,38444149,38444584,38446472,38446694,38448355,38448649,38451764,38452819,38455235,38455451,38455633,38457497,38458051,38459146,38460375,38463423,38463747,38464639,38466091,38467610,38468966,38469305,38473377,38475318,38477710,38478435,38483027,38483290,38485590,38489177,38490076,38490621,38492490,38494352,38496215,38496409,38496860,38499108,38499635,38499908,38500606,38500821,38502507,38502880,38504220,38504748,38505003,38505309,38505806,38506303,38506471,38506829,38507712,38510498,38510660,38511561,38512072,38512245,38515026,38516087,38517359,38519214,38523028,38523217,38525332,38526993,38527647,38528306,38528599,38528951,38532490,38532671,38534720,38535141,38535316,38535997,38536750,38537880,38543347,38543532,38543771,38546445,38548233,38561113,38564959,38566911,38567773,38570607,38572019,38573177,38575919,38577918,38578144,38579982,38580370,38584943,38585938,38586091,38586525,38587325	38433874,38440864,38442453,38443632,38443796,38444261,38444677,38446565,38446768,38448511,38448813,38451885,38453014,38455370,38455546,38455751,38457630,38458292,38459338,38460591,38463527,38463850,38464722,38466398,38467812,38469140,38469513,38473771,38475450,38477870,38478600,38483113,38483516,38486202,38489443,38490276,38490732,38492636,38494625,38496329,38496541,38496954,38499243,38499821,38500016,38500726,38500990,38502727,38502970,38504360,38504911,38505081,38505398,38505946,38506377,38506546,38506952,38507827,38510565,38510781,38511610,38512132,38512483,38515107,38516217,38517691,38519454,38523115,38523309,38525502,38527052,38527784,38528418,38528695,38529057,38532541,38532736,38534819,38535220,38535392,38536070,38536767,38537960,38543435,38543660,38543875,38546526,38548420,38561454,38565771,38566987,38567917,38570693,38572270,38573307,38575961,38578048,38578204,38580128,38580504,38585099,38586002,38586191,38586576,38587564	Gene ID= ENSG00000196218.12 TPM= 883.26 Transcript Type= protein_coding
chr19	38438618	38440289	38438618	38440289	-	transcript3784.chr19.nnic@NA	transcript3784.chr19.nnic	NA	38438618	38440289	Gene ID= novel_gene_chr19_3785 TPM= 11.58 Transcript Type= NA
chr19	38619097	38636955	38619097	38636955	+	ENST00000248342.8@EIF3K	ENST00000248342.8	protein_coding	38619097,38620337,38624077,38626028,38632430,38632601,38634993,38636889	38619327,38620435,38624197,38626102,38632496,38632678,38635118,38636955	Gene ID= ENSG00000178982.9 TPM= 381.3 Transcript Type= protein_coding
chr19	38619095	38636953	38619095	38636953	+	ENST00000593149.5@EIF3K	ENST00000593149.5	protein_coding	38619095,38620337,38624077,38626028,38632430,38632601,38634993,38636889	38619223,38620435,38624197,38626102,38632496,38632678,38635118,38636953	Gene ID= ENSG00000178982.9 TPM= 37.65 Transcript Type= protein_coding
chr19	38619082	38636955	38619082	38636955	+	ENST00000614624.4@EIF3K	ENST00000614624.4	protein_coding	38619082,38624077,38626028,38632430,38632601,38634993,38636889	38619327,38624197,38626102,38632496,38632678,38635118,38636955	Gene ID= ENSG00000178982.9 TPM= 42.16 Transcript Type= protein_coding
chr19	38619211	38636953	38619211	38636953	+	ENST00000592558.1@EIF3K	ENST00000592558.1	protein_coding	38619211,38620337,38624077,38626028,38632430,38634993,38636889	38619327,38620435,38624197,38626102,38632496,38635118,38636953	Gene ID= ENSG00000178982.9 TPM= 36.36 Transcript Type= protein_coding
chr19	38647649	38730102	38647649	38730102	+	transcript3800.chr19.nnic@ACTN4	transcript3800.chr19.nnic	protein_coding	38647649,38700600,38701002,38704934,38706044,38708117,38709395,38710257,38714469,38717086,38717927,38721535,38723614,38723937,38724157,38724431,38725724,38726957,38727944,38728994,38729274	38647907,38700714,38701121,38705020,38706131,38708195,38709476,38710342,38714561,38717316,38718074,38721688,38723722,38724077,38724339,38724565,38725903,38727103,38728026,38729154,38730102	Gene ID= ENSG00000130402.11 TPM= 16.41 Transcript Type= NA
chr19	38659067	38661895	38659067	38661895	-	transcript3806.chr19.nnic@NA	transcript3806.chr19.nnic	NA	38659067	38661895	Gene ID= novel_gene_chr19_3807 TPM= 2.9 Transcript Type= NA
chr19	38815422	38832005	38815422	38832005	-	ENST00000221418.8@ECH1	ENST00000221418.8	protein_coding	38831721,38831309,38831078,38817451,38817316,38817065,38816453,38816284,38815857,38815422	38832005,38831516,38831166,38817575,38817364,38817129,38816523,38816355,38816007,38815717	Gene ID= ENSG00000104823.8 TPM= 599.46 Transcript Type= protein_coding
chr19	38836388	38849985	38836388	38849985	-	transcript3826.chr19.nic@HNRNPL	transcript3826.chr19.nic	protein_coding	38849700,38847316,38845853,38845650,38844008,38843842,38841613,38840488,38840096,38838894,38838397,38837594,38837384,38836388	38849985,38847434,38846090,38845735,38844104,38843914,38841682,38840559,38840376,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 15.2 Transcript Type= NA
chr19	38836388	38850333	38836388	38850333	-	ENST00000221419.9@HNRNPL	ENST00000221419.9	protein_coding	38849700,38847316,38845853,38845650,38844008,38843842,38840488,38840096,38838894,38838397,38837594,38837384,38836388	38850333,38847434,38846090,38845735,38844104,38843914,38840559,38840376,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 93.39 Transcript Type= protein_coding
chr19	38836388	38849981	38836388	38849981	-	transcript3834.chr19.nic@HNRNPL	transcript3834.chr19.nic	protein_coding	38849700,38847316,38845853,38845650,38844008,38843842,38840096,38838894,38838397,38837594,38837384,38836388	38849981,38847434,38846090,38845735,38844104,38843914,38840559,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 23.09 Transcript Type= NA
chr19	38842106	38849986	38842106	38849986	-	transcript3836.chr19.nic@HNRNPL	transcript3836.chr19.nic	protein_coding	38849700,38847316,38845853,38845650,38844008,38842106	38849986,38847434,38846090,38845735,38844104,38843914	Gene ID= ENSG00000104824.16 TPM= 22.68 Transcript Type= NA
chr19	38836395	38852347	38836395	38852347	-	ENST00000388749.7@HNRNPL	ENST00000388749.7	protein_coding	38852296,38847316,38845853,38845650,38844008,38843842,38841613,38840488,38840096,38838894,38838397,38837594,38837384,38836395	38852347,38847434,38846090,38845735,38844104,38843914,38841682,38840559,38840376,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 12.14 Transcript Type= nonsense_mediated_decay
chr19	38878557	38899646	38878557	38899646	-	transcript3843.chr19.nic@SIRT2	transcript3843.chr19.nic	protein_coding	38899506,38898794,38898379,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899646,38898918,38898425,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 76.39 Transcript Type= NA
chr19	38878557	38899823	38878557	38899823	-	ENST00000249396.11@SIRT2	ENST00000249396.11	protein_coding	38899506,38898379,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899823,38898425,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 31.98 Transcript Type= protein_coding
chr19	38878557	38899646	38878557	38899646	-	transcript3850.chr19.nic@SIRT2	transcript3850.chr19.nic	protein_coding	38899506,38898794,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899646,38898918,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 34.88 Transcript Type= NA
chr19	38878557	38899862	38878557	38899862	-	ENST00000392081.6@SIRT2	ENST00000392081.6	protein_coding	38899506,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899862,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 143.96 Transcript Type= protein_coding
chr19	38878557	38899615	38878557	38899615	-	transcript3855.chr19.nic@SIRT2	transcript3855.chr19.nic	protein_coding	38899506,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899615,38893971,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 20.4 Transcript Type= NA
chr19	38897529	38899409	38897529	38899409	-	transcript3861.chr19.nnic@NA	transcript3861.chr19.nnic	NA	38897529	38899409	Gene ID= novel_gene_chr19_3862 TPM= 1.93 Transcript Type= NA
chr19	38899980	38908893	38899980	38908893	+	ENST00000509705.3@NFKBIB	ENST00000509705.3	protein_coding	38899980,38905071,38905202,38907221,38907399	38900211,38905120,38905535,38907309,38908893	Gene ID= ENSG00000104825.16 TPM= 6.27 Transcript Type= nonsense_mediated_decay
chr19	38899952	38908538	38899952	38908538	+	ENST00000572515.5@NFKBIB	ENST00000572515.5	protein_coding	38899952,38905015,38905202,38907221,38907399	38900211,38905120,38905535,38907309,38908538	Gene ID= ENSG00000104825.16 TPM= 42.47 Transcript Type= protein_coding
chr19	38899999	38908886	38899999	38908886	+	ENST00000313582.5@NFKBIB	ENST00000313582.5	protein_coding	38899999,38905015,38905202,38907221,38907399,38908731	38900211,38905120,38905535,38907309,38907659,38908886	Gene ID= ENSG00000104825.16 TPM= 14.96 Transcript Type= protein_coding
chr19	38915266	38930896	38915266	38930896	-	ENST00000221431.10@SARS2	ENST00000221431.10	protein_coding	38930470,38926205,38922238,38921527,38921392,38920086,38919762,38918766,38918422,38918094,38917921,38917724,38916221,38916037,38915841,38915266	38930896,38926300,38922267,38921667,38921446,38920149,38919867,38918813,38918530,38918139,38918008,38917833,38916314,38916129,38915906,38915749	Gene ID= ENSG00000104835.14 TPM= 27.99 Transcript Type= protein_coding
chr19	38930548	38933020	38930548	38933020	+	ENST00000308018.8@MRPS12	ENST00000308018.8	protein_coding	38930548,38931276,38932333	38930998,38931343,38933020	Gene ID= ENSG00000128626.11 TPM= 28.96 Transcript Type= protein_coding
chr19	38930954	38933162	38930954	38933162	+	ENST00000407800.2@MRPS12	ENST00000407800.2	protein_coding	38930954,38932333	38931343,38933162	Gene ID= ENSG00000128626.11 TPM= 2.9 Transcript Type= protein_coding
chr19	38930999	38933020	38930999	38933020	+	ENST00000402029.3@MRPS12	ENST00000402029.3	protein_coding	38930999,38931276,38932333	38931171,38931343,38933020	Gene ID= ENSG00000128626.11 TPM= 4.83 Transcript Type= protein_coding
chr19	38941401	38975910	38941401	38975910	-	ENST00000292852.8@FBXO17	ENST00000292852.8	protein_coding	38975586,38949971,38948567,38946472,38944969,38941401	38975910,38950336,38948678,38946567,38945104,38942751	Gene ID= ENSG00000269190.5 TPM= 4.83 Transcript Type= protein_coding
chr19	39125787	39179401	39125787	39179401	+	transcript3884.chr19.nic@PAK4	transcript3884.chr19.nic	protein_coding	39125787,39168230,39169532,39172918,39173576,39174931,39175312,39176590,39177675,39178424	39125919,39168302,39169757,39173376,39174010,39175064,39175438,39176715,39177809,39179401	Gene ID= ENSG00000130669.17 TPM= 5.79 Transcript Type= NA
chr19	39342432	39384926	39342432	39384926	+	transcript3893.chr19.nic@SAMD4B	transcript3893.chr19.nic	protein_coding	39342432,39354006,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383499	39342576,39354066,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39384926	Gene ID= ENSG00000179134.15 TPM= 25.48 Transcript Type= NA
chr19	39342431	39384926	39342431	39384926	+	transcript3900.chr19.nic@SAMD4B	transcript3900.chr19.nic	protein_coding	39342431,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383499	39342576,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39384926	Gene ID= ENSG00000179134.15 TPM= 24.52 Transcript Type= NA
chr19	39342431	39384926	39342431	39384926	+	transcript3904.chr19.nic@SAMD4B	transcript3904.chr19.nic	protein_coding	39342431,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208	39342576,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39384926	Gene ID= ENSG00000179134.15 TPM= 21.3 Transcript Type= NA
chr19	39385121	39385698	39385121	39385698	+	ENST00000596271.1@SAMD4B	ENST00000596271.1	protein_coding	39385121	39385698	Gene ID= ENSG00000179134.15 TPM= 2.9 Transcript Type= retained_intron
chr19	39342442	39384188	39342442	39384188	+	ENST00000598913.5@SAMD4B	ENST00000598913.5	protein_coding	39342442,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383708	39342576,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39384188	Gene ID= ENSG00000179134.15 TPM= 4.25 Transcript Type= protein_coding
chr19	39385852	39391195	39385852	39391195	-	ENST00000221265.7@PAF1	ENST00000221265.7	protein_coding	39390818,39390260,39390069,39389640,39389480,39389282,39389093,39388947,39388762,39388560,39388339,39386694,39386482,39385852	39391195,39390289,39390161,39389761,39389546,39389383,39389198,39389015,39388865,39388676,39388467,39386799,39386572,39386403	Gene ID= ENSG00000006712.14 TPM= 87.84 Transcript Type= protein_coding
chr19	39385852	39391088	39385852	39391088	-	transcript3903.chr19.nic@PAF1	transcript3903.chr19.nic	protein_coding	39390818,39390260,39390069,39389640,39389480,39389282,39389093,39388762,39388560,39388339,39386694,39386482,39385852	39391088,39390289,39390161,39389761,39389546,39389383,39389198,39389015,39388676,39388467,39386799,39386572,39386403	Gene ID= ENSG00000006712.14 TPM= 2.9 Transcript Type= NA
chr19	39391396	39399559	39391396	39399559	+	ENST00000599213.6@MED29	ENST00000599213.6	protein_coding	39391396,39392464,39393553,39397457	39391638,39392522,39393637,39399559	Gene ID= ENSG00000063322.13 TPM= 3.86 Transcript Type= protein_coding
chr19	39406813	39409412	39406813	39409412	+	ENST00000597629.1@ZFP36	ENST00000597629.1	protein_coding	39406813,39407743	39406928,39409412	Gene ID= ENSG00000128016.5 TPM= 755.84 Transcript Type= protein_coding
chr19	39406858	39409368	39406858	39409368	+	ENST00000594442.1@ZFP36	ENST00000594442.1	protein_coding	39406858,39407745	39406932,39409368	Gene ID= ENSG00000128016.5 TPM= 56.95 Transcript Type= protein_coding
chr19	39433207	39435948	39433207	39435948	-	ENST00000251453.7@RPS16	ENST00000251453.7	protein_coding	39435848,39435607,39433665,39433522,39433207	39435948,39435708,39433761,39433569,39433418	Gene ID= ENSG00000105193.8 TPM= 865.88 Transcript Type= protein_coding
chr19	39433207	39435915	39433207	39435915	-	ENST00000599539.5@RPS16	ENST00000599539.5	protein_coding	39435848,39435607,39433665,39433494,39433207	39435915,39435708,39433761,39433569,39433418	Gene ID= ENSG00000105193.8 TPM= 2.41 Transcript Type= protein_coding
chr19	39433217	39435941	39433217	39435941	-	ENST00000601655.5@RPS16	ENST00000601655.5	protein_coding	39435848,39435658,39433665,39433522,39433217	39435941,39435708,39433761,39433569,39433418	Gene ID= ENSG00000105193.8 TPM= 25.1 Transcript Type= protein_coding
chr19	39433207	39435936	39433207	39435936	-	ENST00000339471.8@RPS16	ENST00000339471.8	protein_coding	39435848,39435607,39433522,39433207	39435936,39435708,39433761,39433418	Gene ID= ENSG00000105193.8 TPM= 1.45 Transcript Type= protein_coding
chr19	39441643	39476670	39441643	39476670	+	ENST00000599117.5@SUPT5H	ENST00000599117.5	protein_coding	39441643,39445441,39445804,39453356,39457675,39458294,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39441725,39445637,39445965,39453521,39457740,39458305,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670	Gene ID= ENSG00000196235.13 TPM= 66.29 Transcript Type= protein_coding
chr19	39445581	39476670	39445581	39476670	+	transcript3932.chr19.nic@SUPT5H	transcript3932.chr19.nic	protein_coding	39445581,39445882,39453356,39457675,39458294,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39445637,39445965,39453521,39457740,39458305,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670	Gene ID= ENSG00000196235.13 TPM= 39.26 Transcript Type= NA
chr19	39445684	39476670	39445684	39476670	+	ENST00000598725.5@SUPT5H	ENST00000598725.5	protein_coding	39445684,39453356,39457675,39458294,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39445965,39453521,39457740,39458305,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670	Gene ID= ENSG00000196235.13 TPM= 39.26 Transcript Type= protein_coding
chr19	39480412	39489928	39480412	39489928	+	ENST00000314349.8@TIMM50	ENST00000314349.8	protein_coding	39480412,39481883,39482885,39483135,39485544,39485688,39486187,39486397,39488061,39488539,39489719	39480961,39482033,39482916,39483156,39485602,39485807,39486291,39486495,39488217,39488645,39489928	Gene ID= ENSG00000105197.10 TPM= 110.05 Transcript Type= protein_coding
chr19	39480412	39490888	39480412	39490888	+	ENST00000544017.5@TIMM50	ENST00000544017.5	protein_coding	39480412,39481883,39482885,39483135,39485544,39485688,39486187,39486397,39488061,39488539,39489719	39480961,39482033,39482916,39483156,39485602,39485807,39486291,39486495,39488217,39488645,39490888	Gene ID= ENSG00000105197.10 TPM= 56.95 Transcript Type= protein_coding
chr19	39480832	39490074	39480832	39490074	+	ENST00000607714.5@TIMM50	ENST00000607714.5	protein_coding	39480832,39481883,39482885,39483135,39485544,39485688,39486187,39486397,39488061,39488539,39489719	39480961,39482033,39482916,39483156,39485602,39485807,39486291,39486495,39488217,39488645,39490074	Gene ID= ENSG00000105197.10 TPM= 56.95 Transcript Type= protein_coding
chr19	39491414	39493071	39491414	39493071	+	transcript3949.chr19.nnic@NA	transcript3949.chr19.nnic	NA	39491414	39493071	Gene ID= novel_gene_chr19_3950 TPM= 1.93 Transcript Type= NA
chr19	39538705	39540333	39538705	39540333	-	ENST00000390658.3@EID2	ENST00000390658.3	protein_coding	39538705	39540333	Gene ID= ENSG00000176396.10 TPM= 3.86 Transcript Type= protein_coding
chr19	39821347	39822653	39821347	39822653	-	transcript3956.chr19.nnic@NA	transcript3956.chr19.nnic	NA	39821347	39822653	Gene ID= novel_gene_chr19_3957 TPM= 4.83 Transcript Type= NA
chr19	39825353	39834201	39825353	39834201	-	ENST00000348817.7@DYRK1B	ENST00000348817.7	protein_coding	39834023,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826952,39826672,39826180,39825353	39834201,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826987,39826867,39826286,39826086	Gene ID= ENSG00000105204.13 TPM= 9.89 Transcript Type= protein_coding
chr19	39825350	39833414	39825350	39833414	-	transcript3961.chr19.nic@DYRK1B	transcript3961.chr19.nic	protein_coding	39833267,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826672,39826180,39825350	39833414,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826867,39826286,39826086	Gene ID= ENSG00000105204.13 TPM= 22.93 Transcript Type= NA
chr19	39825350	39833634	39825350	39833634	-	ENST00000593685.5@DYRK1B	ENST00000593685.5	protein_coding	39833267,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826672,39826180,39825350	39833634,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826987,39826286,39826086	Gene ID= ENSG00000105204.13 TPM= 34.51 Transcript Type= protein_coding
chr19	39825350	39834201	39825350	39834201	-	ENST00000323039.9@DYRK1B	ENST00000323039.9	protein_coding	39834023,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826672,39826180,39825350	39834201,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826987,39826286,39826086	Gene ID= ENSG00000105204.13 TPM= 20.51 Transcript Type= protein_coding
chr19	39834458	39846382	39834458	39846382	-	transcript3972.chr19.nic@FBL	transcript3972.chr19.nic	protein_coding	39846291,39840414,39840233,39839035,39837711,39836556,39834668,39834458	39846382,39840515,39840327,39839205,39837843,39836668,39834813,39834562	Gene ID= ENSG00000105202.8 TPM= 24.13 Transcript Type= NA
chr19	39834458	39846414	39834458	39846414	-	ENST00000221801.7@FBL	ENST00000221801.7	protein_coding	39846291,39840617,39840414,39840233,39839035,39837711,39836556,39834668,39834458	39846414,39840787,39840515,39840327,39839205,39837843,39836668,39834813,39834562	Gene ID= ENSG00000105202.8 TPM= 74.33 Transcript Type= protein_coding
chr19	39863323	39906323	39863323	39906323	-	ENST00000616721.5@FCGBP	ENST00000616721.5	protein_coding	39905731,39902243,39901925,39899556,39895806,39893922,39892911,39891643,39889479,39885991,39885673,39883305,39879555,39877663,39876658,39875388,39873224,39872078,39870216,39866737,39863621,39863323	39906323,39902837,39902124,39899697,39896143,39894495,39893527,39892186,39890071,39886585,39885872,39883446,39879892,39878236,39877274,39875931,39873795,39872651,39870415,39867120,39863892,39863496	Gene ID= ENSG00000275395.5 TPM= 5.79 Transcript Type= protein_coding
chr19	39971005	39981441	39971005	39981441	+	ENST00000157812.6@PSMC4	ENST00000157812.6	protein_coding	39971005,39972146,39972369,39974294,39974524,39974735,39979817,39980070,39980286,39980662,39981192	39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980146,39980454,39980717,39981441	Gene ID= ENSG00000013275.7 TPM= 196.92 Transcript Type= protein_coding
chr19	39971170	39981408	39971170	39981408	+	ENST00000593455.5@PSMC4	ENST00000593455.5	protein_coding	39971170,39972146,39972369,39974294,39974524,39974735,39979817,39980070,39980662,39981192	39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980454,39980717,39981408	Gene ID= ENSG00000013275.7 TPM= 3.38 Transcript Type= retained_intron
chr19	39971170	39981441	39971170	39981441	+	ENST00000455878.2@PSMC4	ENST00000455878.2	protein_coding	39971170,39972146,39972462,39974294,39974524,39974735,39979817,39980070,39980286,39980662,39981192	39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980146,39980454,39980717,39981441	Gene ID= ENSG00000013275.7 TPM= 8.21 Transcript Type= protein_coding
chr19	40072993	40090903	40072993	40090903	-	ENST00000340963.9@ZNF780A	ENST00000340963.9	protein_coding	40090794,40090166,40084745,40083111,40081819,40072993	40090903,40090235,40084798,40083237,40081914,40076209	Gene ID= ENSG00000197782.14 TPM= 1.93 Transcript Type= protein_coding
chr19	40190199	40191396	40190199	40191396	-	transcript3998.chr19.nnic@NA	transcript3998.chr19.nnic	NA	40190199	40191396	Gene ID= novel_gene_chr19_3999 TPM= 1.93 Transcript Type= NA
chr19	40191418	40215575	40191418	40215575	+	transcript3992.chr19.nnic@MAP3K10	transcript3992.chr19.nnic	protein_coding	40191418,40198375,40204485,40205121,40205911,40209103,40212805,40213076,40214970	40192713,40198555,40204633,40205296,40206157,40209219,40212976,40213188,40215575	Gene ID= ENSG00000130758.7 TPM= 2.58 Transcript Type= NA
chr19	40191418	40213400	40191418	40213400	+	transcript3993.chr19.nic@MAP3K10	transcript3993.chr19.nic	protein_coding	40191418,40198375,40204485,40205121,40205911,40209103,40212805	40192713,40198555,40204633,40205296,40206157,40209219,40213400	Gene ID= ENSG00000130758.7 TPM= 2.58 Transcript Type= NA
chr19	40191418	40209394	40191418	40209394	+	transcript3994.chr19.nic@MAP3K10	transcript3994.chr19.nic	protein_coding	40191418,40198375,40204485,40205121,40205911,40209103	40192713,40198555,40204633,40205296,40206157,40209394	Gene ID= ENSG00000130758.7 TPM= 2.58 Transcript Type= NA
chr19	40214969	40216681	40214969	40216681	+	transcript3996.chr19.nnic@NA	transcript3996.chr19.nnic	NA	40214969	40216681	Gene ID= novel_gene_chr19_3997 TPM= 3.86 Transcript Type= NA
chr19	40230317	40285395	40230317	40285395	-	ENST00000392038.6@AKT2	ENST00000392038.6	protein_coding	40285181,40265222,40256926,40255158,40242534,40241938,40240045,40238905,40237969,40236257,40235890,40235263,40235045,40230317	40285395,40265351,40257054,40255269,40242687,40242069,40240110,40238973,40238091,40236385,40236104,40235350,40235147,40233951	Gene ID= ENSG00000105221.16 TPM= 19.31 Transcript Type= protein_coding
chr19	40260015	40261545	40260015	40261545	+	transcript4004.chr19.nnic@NA	transcript4004.chr19.nnic	NA	40260015	40261545	Gene ID= novel_gene_chr19_4005 TPM= 1.93 Transcript Type= NA
chr19	40314637	40317980	40314637	40317980	-	transcript4008.chr19.nnic@NA	transcript4008.chr19.nnic	NA	40314637	40317980	Gene ID= novel_gene_chr19_4009 TPM= 6.76 Transcript Type= NA
chr19	40321080	40348397	40321080	40348397	-	transcript4023.chr19.nnic@C19orf47	transcript4023.chr19.nnic	protein_coding	40348324,40347189,40341839,40336320,40336110,40333851,40328413,40326334,40324006,40322028,40321080	40348397,40347311,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376,40321350	Gene ID= ENSG00000160392.13 TPM= 18.31 Transcript Type= NA
chr19	40321080	40348440	40321080	40348440	-	transcript4028.chr19.nic@C19orf47	transcript4028.chr19.nic	protein_coding	40348324,40341786,40336320,40336110,40333851,40328413,40326334,40324006,40322028,40321080	40348440,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376,40321350	Gene ID= ENSG00000160392.13 TPM= 13.87 Transcript Type= NA
chr19	40321080	40348440	40321080	40348440	-	transcript4029.chr19.nic@C19orf47	transcript4029.chr19.nic	protein_coding	40348324,40341839,40336320,40336110,40333851,40328413,40326334,40324006,40322028,40321080	40348440,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376,40321350	Gene ID= ENSG00000160392.13 TPM= 47.27 Transcript Type= NA
chr19	40321080	40341985	40321080	40341985	-	transcript4034.chr19.nic@C19orf47	transcript4034.chr19.nic	protein_coding	40341839,40336320,40336110,40333851,40328413,40326334,40324006,40322028,40321080	40341985,40336407,40336224,40333929,40328550,40326486,40324076,40322376,40321350	Gene ID= ENSG00000160392.13 TPM= 91.19 Transcript Type= NA
chr19	40321080	40322339	40321080	40322339	-	ENST00000584868.1@C19orf47	ENST00000584868.1	protein_coding	40322028,40321080	40322339,40321350	Gene ID= ENSG00000160392.13 TPM= 27.99 Transcript Type= processed_transcript
chr19	40348585	40378483	40348585	40378483	+	transcript4013.chr19.nic@PLD3	transcript4013.chr19.nic	protein_coding	40348585,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348724,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 11.75 Transcript Type= NA
chr19	40348669	40378483	40348669	40378483	+	transcript4014.chr19.nic@PLD3	transcript4014.chr19.nic	protein_coding	40348669,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365585,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 12.55 Transcript Type= NA
chr19	40348669	40378483	40348669	40378483	+	transcript4015.chr19.nic@PLD3	transcript4015.chr19.nic	protein_coding	40348669,40365553,40366384,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 8.21 Transcript Type= NA
chr19	40348669	40378483	40348669	40378483	+	transcript4016.chr19.nic@PLD3	transcript4016.chr19.nic	protein_coding	40348669,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 31.54 Transcript Type= NA
chr19	40348690	40378483	40348690	40378483	+	ENST00000409735.8@PLD3	ENST00000409735.8	protein_coding	40348690,40365718,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 11.27 Transcript Type= protein_coding
chr19	40348700	40378483	40348700	40378483	+	ENST00000356508.9@PLD3	ENST00000356508.9	protein_coding	40348700,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348724,40365585,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 17.38 Transcript Type= protein_coding
chr19	40421592	40426025	40421592	40426025	-	ENST00000357949.4@SERTAD1	ENST00000357949.4	protein_coding	40425867,40421592	40426025,40423546	Gene ID= ENSG00000197019.4 TPM= 32.82 Transcript Type= protein_coding
chr19	40440844	40444705	40440844	40444705	-	ENST00000322354.3@SERTAD3	ENST00000322354.3	protein_coding	40444215,40440844	40444705,40442086	Gene ID= ENSG00000167565.12 TPM= 41.51 Transcript Type= protein_coding
chr19	40447789	40465840	40447789	40465840	-	ENST00000263368.8@BLVRB	ENST00000263368.8	protein_coding	40465610,40458381,40458155,40451364,40447789	40465840,40458545,40458244,40451492,40448046	Gene ID= ENSG00000090013.9 TPM= 190.48 Transcript Type= protein_coding
chr19	40447789	40465745	40447789	40465745	-	ENST00000595483.5@BLVRB	ENST00000595483.5	protein_coding	40465610,40458381,40458155,40447789	40465745,40458545,40458244,40448046	Gene ID= ENSG00000090013.9 TPM= 4.18 Transcript Type= protein_coding
chr19	40464258	40465746	40464258	40465746	-	transcript4045.chr19.nnic@NA	transcript4045.chr19.nnic	NA	40464258	40465746	Gene ID= novel_gene_chr19_4046 TPM= 1.93 Transcript Type= NA
chr19	40576851	40591397	40576851	40591397	+	ENST00000291842.9@SHKBP1	ENST00000291842.9	protein_coding	40576851,40577231,40577396,40577557,40578154,40578462,40580324,40580566,40580746,40582351,40583398,40583601,40586774,40588624,40589082,40590244,40590730,40590976	40576985,40577284,40577441,40577630,40578212,40578542,40580485,40580656,40580936,40582466,40583485,40583717,40586944,40588779,40589178,40590422,40590853,40591397	Gene ID= ENSG00000160410.14 TPM= 39.58 Transcript Type= protein_coding
chr19	40601344	40629818	40601344	40629818	+	transcript4059.chr19.nic@LTBP4	transcript4059.chr19.nic	protein_coding	40601344,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484,40609530,40609746,40610532,40611152,40611859,40612073,40613065,40613404,40613916,40614315,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396	40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608603,40609661,40609871,40610657,40611394,40611984,40612192,40613196,40613529,40614038,40614446,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629818	Gene ID= ENSG00000090006.17 TPM= 28.96 Transcript Type= NA
chr19	40691530	40716897	40691530	40716897	-	transcript4062.chr19.nnic@COQ8B	transcript4062.chr19.nnic	protein_coding	40716862,40716587,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40716897,40716703,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 2.25 Transcript Type= NA
chr19	40691530	40715098	40691530	40715098	-	transcript4066.chr19.nic@COQ8B	transcript4066.chr19.nic	protein_coding	40715057,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40715098,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 4.18 Transcript Type= NA
chr19	40691530	40715769	40691530	40715769	-	transcript4067.chr19.nnic@COQ8B	transcript4067.chr19.nnic	protein_coding	40715707,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40715769,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 2.25 Transcript Type= NA
chr19	40691530	40716896	40691530	40716896	-	transcript4069.chr19.nic@COQ8B	transcript4069.chr19.nic	protein_coding	40716862,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40716896,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 4.18 Transcript Type= NA
chr19	40691529	40716885	40691529	40716885	-	ENST00000324464.7@COQ8B	ENST00000324464.7	protein_coding	40716587,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691529	40716885,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 6.11 Transcript Type= protein_coding
chr19	40717015	40738011	40717015	40738011	+	transcript4083.chr19.nic@ITPKC	transcript4083.chr19.nic	protein_coding	40717015,40725340,40729202,40733160,40736986,40737698	40718290,40725439,40729415,40733364,40737087,40738011	Gene ID= ENSG00000086544.2 TPM= 1.93 Transcript Type= NA
chr19	40717103	40740860	40717103	40740860	+	ENST00000263370.2@ITPKC	ENST00000263370.2	protein_coding	40717103,40725340,40729202,40733160,40736986,40737698,40739357	40718290,40725439,40729415,40733364,40737087,40737769,40740860	Gene ID= ENSG00000086544.2 TPM= 52.13 Transcript Type= protein_coding
chr19	40750859	40765389	40750859	40765389	+	ENST00000243563.7@SNRPA	ENST00000243563.7	protein_coding	40750859,40757332,40759431,40762901,40763587,40765008	40751481,40757504,40759610,40763074,40763675,40765389	Gene ID= ENSG00000077312.8 TPM= 19.31 Transcript Type= protein_coding
chr19	40778266	40796935	40778266	40796935	+	ENST00000357052.7@RAB4B	ENST00000357052.7	protein_coding	40778266,40780019,40780385,40783778,40783921,40786665,40786848,40796570	40778391,40780099,40780499,40783840,40784075,40786760,40786978,40796935	Gene ID= ENSG00000167578.17 TPM= 21.24 Transcript Type= protein_coding
chr19	40799187	40808432	40799187	40808432	+	ENST00000303961.8@EGLN2	ENST00000303961.8	protein_coding	40799187,40800339,40806555,40807138,40807484,40807809	40799262,40801415,40806674,40807274,40807551,40808432	Gene ID= ENSG00000269858.5 TPM= 159.76 Transcript Type= protein_coding
chr19	41219203	41261766	41219203	41261766	+	ENST00000301178.8@AXL	ENST00000301178.8	protein_coding	41219203,41220636,41221146,41221880,41230967,41231183,41237944,41238470,41239164,41239694,41242883,41243616,41248514,41248743,41252351,41252846,41253599,41256452,41257493,41259553	41219477,41220858,41221246,41222056,41231047,41231298,41238154,41238609,41239314,41239720,41243015,41243707,41248609,41248820,41252443,41252967,41253708,41256611,41257629,41261766	Gene ID= ENSG00000167601.11 TPM= 22.2 Transcript Type= protein_coding
chr19	41219235	41260294	41219235	41260294	+	ENST00000359092.7@AXL	ENST00000359092.7	protein_coding	41219235,41220636,41221146,41221880,41230967,41231183,41237944,41238470,41239164,41242883,41243616,41248514,41248743,41252351,41252846,41253599,41256452,41257493,41259553	41219477,41220858,41221246,41222056,41231047,41231298,41238154,41238609,41239314,41243015,41243707,41248609,41248820,41252443,41252967,41253708,41256611,41257629,41260294	Gene ID= ENSG00000167601.11 TPM= 1.93 Transcript Type= protein_coding
chr19	41264331	41307376	41264331	41307376	+	ENST00000392006.7@HNRNPUL1	ENST00000392006.7	protein_coding	41264331,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449	41264798,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307376	Gene ID= ENSG00000105323.16 TPM= 34.43 Transcript Type= protein_coding
chr19	41264350	41307029	41264350	41307029	+	transcript4110.chr19.nic@HNRNPUL1	transcript4110.chr19.nic	protein_coding	41264350,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305646,41306449	41264692,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307029	Gene ID= ENSG00000105323.16 TPM= 6.44 Transcript Type= NA
chr19	41264411	41307050	41264411	41307050	+	ENST00000595196.5@HNRNPUL1	ENST00000595196.5	protein_coding	41264411,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449	41264692,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307050	Gene ID= ENSG00000105323.16 TPM= 27.68 Transcript Type= nonsense_mediated_decay
chr19	41310189	41324883	41310189	41324883	+	ENST00000269967.3@CCDC97	ENST00000269967.3	protein_coding	41310189,41316384,41319574,41320341,41322595	41310356,41316839,41319852,41320470,41324883	Gene ID= ENSG00000142039.3 TPM= 47.78 Transcript Type= protein_coding
chr19	41310218	41320981	41310218	41320981	+	transcript4122.chr19.nic@CCDC97	transcript4122.chr19.nic	protein_coding	41310218,41316384,41319574,41320341	41310356,41316839,41319852,41320981	Gene ID= ENSG00000142039.3 TPM= 3.38 Transcript Type= NA
chr19	41386374	41397479	41386374	41397479	-	ENST00000221233.8@EXOSC5	ENST00000221233.8	protein_coding	41397181,41392867,41391841,41389765,41387514,41386374	41397479,41392980,41391962,41389905,41387603,41386725	Gene ID= ENSG00000077348.8 TPM= 30.89 Transcript Type= protein_coding
chr19	41397460	41425005	41397460	41425005	+	ENST00000269980.6@BCKDHA	ENST00000269980.6	protein_coding	41397460,41410637,41410923,41414049,41419135,41422164,41422629,41422998,41424438	41397935,41410816,41411009,41414157,41419296,41422370,41422770,41423169,41425005	Gene ID= ENSG00000248098.11 TPM= 116.8 Transcript Type= protein_coding
chr19	41397786	41425002	41397786	41425002	+	transcript4132.chr19.nic@BCKDHA	transcript4132.chr19.nic	protein_coding	41397786,41410637,41410923,41414049,41419135,41422164,41422629,41422998,41424502	41397935,41410816,41411009,41414157,41419296,41422370,41422770,41423169,41425002	Gene ID= ENSG00000248098.11 TPM= 26.06 Transcript Type= NA
chr19	41431319	41439938	41431319	41439938	-	transcript4140.chr19.nnic@DMAC2	transcript4140.chr19.nnic	protein_coding	41439882,41438218,41436378,41433537,41433272,41431319	41439938,41438414,41436472,41433673,41433434,41432408	Gene ID= ENSG00000105341.18 TPM= 3.86 Transcript Type= NA
chr19	41431319	41439905	41431319	41439905	-	ENST00000221943.13@DMAC2	ENST00000221943.13	protein_coding	41439882,41438218,41436392,41433537,41433272,41431319	41439905,41438414,41436472,41433673,41433434,41432408	Gene ID= ENSG00000105341.18 TPM= 52.13 Transcript Type= protein_coding
chr19	41431339	41439936	41431339	41439936	-	ENST00000592922.6@DMAC2	ENST00000592922.6	protein_coding	41439882,41438218,41433537,41433272,41431339	41439936,41438414,41433673,41433434,41432408	Gene ID= ENSG00000105341.18 TPM= 3.86 Transcript Type= protein_coding
chr19	41431318	41439910	41431318	41439910	-	ENST00000438807.7@DMAC2	ENST00000438807.7	protein_coding	41439882,41438218,41433537,41431318	41439910,41438414,41433673,41432408	Gene ID= ENSG00000105341.18 TPM= 4.83 Transcript Type= protein_coding
chr19	41479128	41500644	41479128	41500644	-	transcript4147.chr19.nnic@PCAT19	transcript4147.chr19.nnic	lincRNA	41500584,41495302,41479128	41500644,41495427,41479284	Gene ID= ENSG00000267107.6 TPM= 2.9 Transcript Type= NA
chr19	41859918	41872926	41859918	41872926	+	ENST00000598742.5@RPS19	ENST00000598742.5	protein_coding	41859918,41860775,41861112,41869031,41869699,41871351	41860289,41860845,41861212,41869214,41869753,41872926	Gene ID= ENSG00000105372.6 TPM= 49.71 Transcript Type= protein_coding
chr19	41860257	41871416	41860257	41871416	+	ENST00000221975.6@RPS19	ENST00000221975.6	protein_coding	41860257,41860785,41861112,41869031,41869699,41871351	41860289,41860845,41861212,41869214,41869753,41871416	Gene ID= ENSG00000105372.6 TPM= 620.69 Transcript Type= protein_coding
chr19	41883179	41907443	41883179	41907443	+	transcript4155.chr19.nic@ARHGEF1	transcript4155.chr19.nic	protein_coding	41883179,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41897946,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906703,41907105	41883289,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898113,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906803,41907443	Gene ID= ENSG00000076928.17 TPM= 2.41 Transcript Type= NA
chr19	41883161	41907443	41883161	41907443	+	ENST00000354532.7@ARHGEF1	ENST00000354532.7	protein_coding	41883161,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41883289,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907443	Gene ID= ENSG00000076928.17 TPM= 11.58 Transcript Type= protein_coding
chr19	41884382	41907443	41884382	41907443	+	transcript4157.chr19.nic@ARHGEF1	transcript4157.chr19.nic	protein_coding	41884382,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41897946,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906703,41907105	41884493,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898113,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906803,41907443	Gene ID= ENSG00000076928.17 TPM= 5.31 Transcript Type= NA
chr19	41884382	41907443	41884382	41907443	+	transcript4158.chr19.nnic@ARHGEF1	transcript4158.chr19.nnic	protein_coding	41884382,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902586,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41884493,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907443	Gene ID= ENSG00000076928.17 TPM= 1.93 Transcript Type= NA
chr19	41883184	41907448	41883184	41907448	+	ENST00000599846.5@ARHGEF1	ENST00000599846.5	protein_coding	41883184,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41897946,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41883289,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898113,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907448	Gene ID= ENSG00000076928.17 TPM= 8.69 Transcript Type= protein_coding
chr19	41956681	41959390	41956681	41959390	-	ENST00000222008.10@RABAC1	ENST00000222008.10	protein_coding	41959237,41958736,41958286,41957018,41956681	41959390,41958948,41958383,41957119,41956934	Gene ID= ENSG00000105404.10 TPM= 116.8 Transcript Type= protein_coding
chr19	41956681	41959299	41956681	41959299	-	ENST00000601891.5@RABAC1	ENST00000601891.5	protein_coding	41959237,41958736,41958286,41956681	41959299,41958948,41958383,41956934	Gene ID= ENSG00000105404.10 TPM= 6.76 Transcript Type= protein_coding
chr19	42198598	42220159	42198598	42220159	-	transcript4166.chr19.nnic@DEDD2	transcript4166.chr19.nnic	protein_coding	42220074,42217632,42216680,42215133,42209700,42198598	42220159,42217829,42217045,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 8.93 Transcript Type= NA
chr19	42198598	42220134	42198598	42220134	-	transcript4169.chr19.nic@DEDD2	transcript4169.chr19.nic	protein_coding	42220074,42215133,42209700,42198598	42220134,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 3.14 Transcript Type= NA
chr19	42198613	42220123	42198613	42220123	-	ENST00000595337.5@DEDD2	ENST00000595337.5	protein_coding	42220074,42216680,42215133,42209700,42198613	42220123,42217045,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 8.93 Transcript Type= protein_coding
chr19	42198598	42217669	42198598	42217669	-	ENST00000336034.8@DEDD2	ENST00000336034.8	protein_coding	42217632,42216680,42215148,42209700,42198598	42217669,42217045,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 20.51 Transcript Type= protein_coding
chr19	42198616	42217742	42198616	42217742	-	ENST00000593804.5@DEDD2	ENST00000593804.5	protein_coding	42217632,42215133,42209700,42198616	42217742,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 2.9 Transcript Type= processed_transcript
chr19	42220271	42228201	42220271	42228201	+	ENST00000301215.7@ZNF526	ENST00000301215.7	protein_coding	42220271,42224215,42224387	42220387,42224305,42228201	Gene ID= ENSG00000167625.10 TPM= 5.79 Transcript Type= protein_coding
chr19	42229157	42231887	42229157	42231887	+	transcript4177.chr19.nnic@NA	transcript4177.chr19.nnic	NA	42229157	42231887	Gene ID= novel_gene_chr19_4178 TPM= 1.93 Transcript Type= NA
chr19	42230186	42242593	42230186	42242593	-	ENST00000222330.7@GSK3A	ENST00000222330.7	protein_coding	42242183,42239955,42236858,42236606,42234548,42234353,42233286,42233110,42232496,42232057,42230186	42242593,42240142,42236941,42236716,42234678,42234459,42233383,42233205,42232682,42232149,42230867	Gene ID= ENSG00000105723.11 TPM= 47.3 Transcript Type= protein_coding
chr19	42230222	42242625	42230222	42242625	-	ENST00000453535.1@GSK3A	ENST00000453535.1	protein_coding	42242183,42239955,42236858,42236606,42234548,42234353,42233286,42233110,42232496,42232057,42230679,42230222	42242625,42240142,42236941,42236716,42234678,42234459,42233383,42233205,42232682,42232149,42230867,42230391	Gene ID= ENSG00000105723.11 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr19	42297033	42302777	42297033	42302777	-	ENST00000538771.5@PAFAH1B3	ENST00000538771.5	protein_coding	42302437,42302232,42301950,42300171,42299970,42297033	42302777,42302325,42302039,42300287,42300092,42297365	Gene ID= ENSG00000079462.7 TPM= 5.31 Transcript Type= protein_coding
chr19	42297033	42302571	42297033	42302571	-	ENST00000262890.7@PAFAH1B3	ENST00000262890.7	protein_coding	42302232,42301950,42300171,42299970,42297033	42302571,42302039,42300287,42300092,42297365	Gene ID= ENSG00000079462.7 TPM= 7.24 Transcript Type= protein_coding
chr19	43506719	43527244	43506719	43527244	-	ENST00000292147.6@ETHE1	ENST00000292147.6	protein_coding	43527097,43526515,43526201,43511437,43508775,43507944,43506719	43527244,43526659,43526349,43511566,43508864,43508060,43506902	Gene ID= ENSG00000105755.7 TPM= 11.58 Transcript Type= protein_coding
chr19	43543040	43576006	43543040	43576006	-	ENST00000262887.9@XRCC1	ENST00000262887.9	protein_coding	43575408,43574910,43560910,43554646,43553609,43553401,43552982,43552797,43552017,43551571,43546884,43546595,43546052,43545818,43544144,43543612,43543040	43576006,43575002,43561020,43554804,43553683,43553512,43553091,43552908,43552275,43551687,43546977,43546727,43546106,43545957,43544234,43543687,43543505	Gene ID= ENSG00000073050.11 TPM= 4.83 Transcript Type= protein_coding
chr19	43584369	43596135	43584369	43596135	-	ENST00000422989.5@IRGQ	ENST00000422989.5	protein_coding	43595982,43594809,43584369	43596135,43595340,43593367	Gene ID= ENSG00000167378.8 TPM= 212.37 Transcript Type= protein_coding
chr19	43585936	43589687	43585936	43589687	-	ENST00000596409.1@IRGQ	ENST00000596409.1	protein_coding	43585936	43589687	Gene ID= ENSG00000167378.8 TPM= 6.76 Transcript Type= retained_intron
chr19	43596392	43600004	43596392	43600004	+	ENST00000391965.6@ZNF576	ENST00000391965.6	protein_coding	43596392,43597094,43598831	43596585,43597193,43600004	Gene ID= ENSG00000124444.15 TPM= 1.93 Transcript Type= protein_coding
chr19	43596595	43599414	43596595	43599414	+	ENST00000529930.1@ZNF576	ENST00000529930.1	protein_coding	43596595,43597097,43598831	43596743,43597193,43599414	Gene ID= ENSG00000124444.15 TPM= 7.72 Transcript Type= protein_coding
chr19	43607219	43619874	43607219	43619874	-	ENST00000300811.7@ZNF428	ENST00000300811.7	protein_coding	43619558,43614229,43607219	43619874,43614434,43608107	Gene ID= ENSG00000131116.11 TPM= 14.48 Transcript Type= protein_coding
chr19	43622368	43639839	43622368	43639839	-	ENST00000222374.2@CADM4	ENST00000222374.2	protein_coding	43639727,43627644,43627166,43626784,43626124,43625911,43625078,43624114,43622368	43639839,43627790,43627318,43626918,43626288,43626001,43625250,43624242,43623439	Gene ID= ENSG00000105767.2 TPM= 1.93 Transcript Type= protein_coding
chr19	43648580	43670350	43648580	43670350	-	ENST00000340093.7@PLAUR	ENST00000340093.7	protein_coding	43670066,43667581,43665316,43656479,43655439,43652225,43648580	43670350,43667691,43665459,43656640,43655573,43652371,43649143	Gene ID= ENSG00000011422.11 TPM= 2.9 Transcript Type= protein_coding
chr19	43727992	43754990	43727992	43754990	-	ENST00000270066.10@SMG9	ENST00000270066.10	protein_coding	43754654,43750592,43747978,43747633,43747442,43744772,43740107,43738122,43737597,43734389,43733626,43733324,43732858,43727992	43754990,43750747,43748052,43747897,43747539,43744884,43740218,43738217,43737682,43734495,43733733,43733452,43733002,43731674	Gene ID= ENSG00000105771.13 TPM= 2.9 Transcript Type= protein_coding
chr19	44094361	44109823	44094361	44109823	+	transcript4237.chr19.nic@ZNF224	transcript4237.chr19.nic	protein_coding	44094361,44096343,44097806,44100801,44101133,44106396	44094530,44096431,44097888,44100927,44101225,44109823	Gene ID= ENSG00000267680.5 TPM= 2.9 Transcript Type= NA
chr19	44094392	44109886	44094392	44109886	+	ENST00000336976.10@ZNF224	ENST00000336976.10	protein_coding	44094392,44096343,44097806,44100801,44101133,44106396	44094488,44096431,44097888,44100927,44101225,44109886	Gene ID= ENSG00000267680.5 TPM= 1.93 Transcript Type= protein_coding
chr19	44113358	44134816	44113358	44134816	+	ENST00000262894.10@ZNF225	ENST00000262894.10	protein_coding	44113358,44115760,44118188,44118482,44130850	44113569,44115842,44118314,44118574,44134816	Gene ID= ENSG00000256294.7 TPM= 1.93 Transcript Type= protein_coding
chr19	44165104	44175429	44165104	44175429	+	ENST00000300823.10@ZNF226	ENST00000300823.10	protein_coding	44165104,44165757,44170035,44172088,44172860,44174984	44165142,44165807,44170095,44172214,44172952,44175429	Gene ID= ENSG00000167380.16 TPM= 1.93 Transcript Type= protein_coding
chr19	44212528	44237267	44212528	44237267	+	ENST00000621083.4@ZNF227	ENST00000621083.4	protein_coding	44212528,44213087,44217791,44228446,44229733,44234702	44212585,44213244,44217852,44228572,44229816,44237267	Gene ID= ENSG00000131115.15 TPM= 2.41 Transcript Type= protein_coding
chr19	44212528	44237267	44212528	44237267	+	ENST00000391961.6@ZNF227	ENST00000391961.6	protein_coding	44212528,44213087,44228446,44229733,44234702	44212585,44213244,44228572,44229816,44237267	Gene ID= ENSG00000131115.15 TPM= 1.45 Transcript Type= protein_coding
chr19	44643798	44663583	44643798	44663583	+	ENST00000425690.7@PVR	ENST00000425690.7	protein_coding	44643798,44647223,44649809,44653900,44657762,44658742,44661292,44661740	44644175,44647570,44650105,44654017,44657910,44658900,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 38.69 Transcript Type= protein_coding
chr19	44643798	44663583	44643798	44663583	+	ENST00000344956.8@PVR	ENST00000344956.8	protein_coding	44643798,44647223,44649809,44653900,44657762,44661292,44661740	44644175,44647570,44650105,44654017,44657910,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 9.73 Transcript Type= protein_coding
chr19	44643834	44663583	44643834	44663583	+	transcript4264.chr19.nic@PVR	transcript4264.chr19.nic	protein_coding	44643834,44647223,44649809,44653900,44661292,44661740	44644175,44647570,44650105,44654017,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 8.77 Transcript Type= NA
chr19	44643910	44663583	44643910	44663583	+	ENST00000403059.8@PVR	ENST00000403059.8	protein_coding	44643910,44647223,44649809,44653900,44657762,44658742,44661292,44661740	44644175,44647570,44650105,44654017,44657910,44658765,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 16.17 Transcript Type= protein_coding
chr19	44748547	44760044	44748547	44760044	+	ENST00000164227.9@BCL3	ENST00000164227.9	protein_coding	44748547,44751227,44756232,44757017,44757327,44757646,44758246,44758724,44759428	44749046,44751380,44756340,44757221,44757415,44757723,44758413,44758841,44760044	Gene ID= ENSG00000069399.14 TPM= 17.38 Transcript Type= protein_coding
chr19	44809103	44821414	44809103	44821414	+	ENST00000270233.10@BCAM	ENST00000270233.10	protein_coding	44809103,44811225,44812163,44812478,44813250,44813438,44814152,44814604,44818522,44818741,44819056,44819346,44819582,44820705,44820916	44809206,44811346,44812391,44812548,44813346,44813620,44814288,44814760,44818637,44818882,44819192,44819490,44819726,44820822,44821414	Gene ID= ENSG00000187244.10 TPM= 14.48 Transcript Type= protein_coding
chr19	44846175	44878941	44846175	44878941	+	ENST00000252485.8@NECTIN2	ENST00000252485.8	protein_coding	44846175,44865271,44871853,44873916,44874330,44878223	44846613,44865660,44872149,44874033,44874478,44878941	Gene ID= ENSG00000130202.9 TPM= 76.74 Transcript Type= protein_coding
chr19	44846299	44878941	44846299	44878941	+	transcript4275.chr19.nnic@NECTIN2	transcript4275.chr19.nnic	protein_coding	44846299,44871853,44873916,44874330,44878223	44846613,44872149,44874033,44874478,44878941	Gene ID= ENSG00000130202.9 TPM= 7.24 Transcript Type= NA
chr19	44891215	44903686	44891215	44903686	+	transcript4276.chr19.nnic@TOMM40	transcript4276.chr19.nnic	protein_coding	44891215,44891407,44892393,44892837,44893780,44893961,44900730,44901028,44901208,44901388,44903030	44891314,44891689,44892460,44892929,44893881,44894066,44900852,44901104,44901310,44901452,44903686	Gene ID= ENSG00000130204.12 TPM= 13.83 Transcript Type= NA
chr19	44891220	44903688	44891220	44903688	+	ENST00000405636.6@TOMM40	ENST00000405636.6	protein_coding	44891220,44891407,44892393,44892837,44893780,44893961,44900730,44901028,44901208,44903030	44891314,44891689,44892460,44892929,44893881,44894066,44900852,44901104,44901310,44903688	Gene ID= ENSG00000130204.12 TPM= 314.04 Transcript Type= protein_coding
chr19	44891236	44903628	44891236	44903628	+	ENST00000426677.6@TOMM40	ENST00000426677.6	protein_coding	44891236,44892393,44892837,44893780,44893961,44900730,44901028,44901208,44903030	44891689,44892460,44892929,44893881,44894066,44900852,44901104,44901310,44903628	Gene ID= ENSG00000130204.12 TPM= 37 Transcript Type= protein_coding
chr19	44905754	44909393	44905754	44909393	+	ENST00000252486.8@APOE	ENST00000252486.8	protein_coding	44905754,44906602,44907760,44908533	44905841,44906667,44907952,44909393	Gene ID= ENSG00000130203.9 TPM= 18.34 Transcript Type= protein_coding
chr19	44914247	44919342	44914247	44919342	+	ENST00000588750.5@APOC1	ENST00000588750.5	protein_coding	44914247,44914672,44914872,44916190,44919173	44914489,44914733,44914949,44916325,44919342	Gene ID= ENSG00000130208.9 TPM= 1.93 Transcript Type= protein_coding
chr19	44955246	44993341	44955246	44993341	+	ENST00000337392.9@CLPTM1	ENST00000337392.9	protein_coding	44955246,44961963,44973087,44974439,44977343,44985218,44986455,44987179,44988080,44990395,44990850,44991238,44992233,44992611	44955467,44962075,44973210,44974597,44977460,44985303,44986575,44987423,44988173,44990585,44990945,44991373,44992400,44993341	Gene ID= ENSG00000104853.15 TPM= 128.39 Transcript Type= protein_coding
chr19	45001430	45038194	45001430	45038194	+	ENST00000221452.12@RELB	ENST00000221452.12	protein_coding	45001430,45002949,45009814,45011936,45022053,45025329,45025606,45028888,45032534,45034244,45034451,45037405	45001685,45002996,45009822,45012276,45022210,45025420,45025737,45028992,45032749,45034312,45034528,45038194	Gene ID= ENSG00000104856.13 TPM= 17.38 Transcript Type= protein_coding
chr19	45001461	45038159	45001461	45038159	+	ENST00000505236.1@RELB	ENST00000505236.1	protein_coding	45001461,45002949,45011936,45022053,45025329,45025606,45028888,45032534,45034244,45034451,45037405	45001685,45002996,45012276,45022210,45025420,45025737,45028992,45032749,45034312,45034528,45038159	Gene ID= ENSG00000104856.13 TPM= 5.79 Transcript Type= protein_coding
chr19	45039040	45070956	45039040	45070956	+	ENST00000221455.7@CLASRP	ENST00000221455.7	protein_coding	45039040,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012,45064343,45067337,45068015,45068420,45069066,45069202,45070022,45070537,45070803	45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45064227,45064630,45067594,45068054,45068480,45069124,45069248,45070104,45070561,45070956	Gene ID= ENSG00000104859.14 TPM= 26.55 Transcript Type= protein_coding
chr19	45039065	45070956	45039065	45070956	+	ENST00000391952.7@CLASRP	ENST00000391952.7	protein_coding	45039065,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012,45064343,45067337,45068015,45068420,45069066,45069202,45070022,45070537,45070803	45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45064227,45064630,45067594,45068058,45068480,45069124,45069248,45070104,45070561,45070956	Gene ID= ENSG00000104859.14 TPM= 18.82 Transcript Type= nonsense_mediated_decay
chr19	45079262	45091524	45079262	45091524	+	ENST00000270257.8@GEMIN7	ENST00000270257.8	protein_coding	45079262,45079907,45090107	45079377,45080029,45091524	Gene ID= ENSG00000142252.10 TPM= 11.58 Transcript Type= protein_coding
chr19	45087126	45090916	45087126	45090916	+	transcript4320.chr19.nnic@NA	transcript4320.chr19.nnic	NA	45087126	45090916	Gene ID= novel_gene_chr19_4321 TPM= 2.9 Transcript Type= NA
chr19	45092962	45147285	45092962	45147285	+	ENST00000221462.8@PPP1R37	ENST00000221462.8	protein_coding	45092962,45138514,45140236,45140506,45141322,45142061,45142303,45143521,45144854,45145094,45145353,45146390,45146571	45093527,45138611,45140281,45140606,45141441,45142211,45142458,45143633,45144995,45145260,45146049,45146480,45147285	Gene ID= ENSG00000104866.10 TPM= 18.34 Transcript Type= protein_coding
chr19	45162928	45178237	45162928	45178237	-	ENST00000006275.8@TRAPPC6A	ENST00000006275.8	protein_coding	45178093,45165127,45164853,45164164,45163916,45162928	45178237,45165194,45164970,45164247,45164009,45163223	Gene ID= ENSG00000007255.10 TPM= 8.69 Transcript Type= protein_coding
chr19	45178745	45181801	45178745	45181801	+	ENST00000433642.2@BLOC1S3	ENST00000433642.2	protein_coding	45178745,45179288	45178831,45181801	Gene ID= ENSG00000189114.6 TPM= 45.37 Transcript Type= protein_coding
chr19	45306414	45322977	45306414	45322977	-	ENST00000221476.3@CKM	ENST00000221476.3	protein_coding	45322821,45319521,45317825,45315465,45311749,45308409,45307461,45306414	45322977,45319731,45317979,45315597,45311920,45308532,45307650,45306928	Gene ID= ENSG00000104879.4 TPM= 65046.29 Transcript Type= protein_coding
chr19	45349837	45370618	45349837	45370618	-	ENST00000391945.8@ERCC2	ENST00000391945.8	protein_coding	45370536,45370133,45369070,45368930,45368630,45365042,45364838,45364424,45364235,45363986,45363743,45361524,45357630,45357474,45357270,45355665,45354730,45353242,45353083,45352746,45352506,45352209,45349837	45370618,45370232,45369147,45368992,45368743,45365158,45364954,45364547,45364331,45364119,45363911,45361642,45357699,45357543,45357371,45355728,45354851,45353334,45353155,45352816,45352649,45352352,45351721	Gene ID= ENSG00000104884.14 TPM= 1.93 Transcript Type= protein_coding
chr19	45406209	45410766	45406209	45410766	+	ENST00000309424.7@CD3EAP	ENST00000309424.7	protein_coding	45406209,45407094,45408133	45406718,45407235,45410766	Gene ID= ENSG00000117877.10 TPM= 3.86 Transcript Type= protein_coding
chr19	45406691	45409786	45406691	45409786	+	ENST00000589804.1@CD3EAP	ENST00000589804.1	protein_coding	45406691,45407094,45408133	45406724,45407235,45409786	Gene ID= ENSG00000117877.10 TPM= 1.93 Transcript Type= protein_coding
chr19	45409616	45423908	45409616	45423908	-	transcript4623.chr19.nic@ERCC1	transcript4623.chr19.nic	protein_coding	45423823,45423270,45421178,45420324,45419098,45416821,45414861,45413677,45409616	45423908,45423381,45421393,45420427,45419197,45416897,45414960,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 3.86 Transcript Type= NA
chr19	45412736	45423899	45412736	45423899	-	transcript4624.chr19.nic@ERCC1	transcript4624.chr19.nic	protein_coding	45423781,45423270,45421178,45420324,45419098,45416821,45414861,45413963,45412736	45423899,45423381,45421393,45420427,45419197,45416897,45414960,45414034,45413745	Gene ID= ENSG00000012061.15 TPM= 2.9 Transcript Type= NA
chr19	45413436	45423923	45413436	45423923	-	transcript4627.chr19.nic@ERCC1	transcript4627.chr19.nic	protein_coding	45423823,45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413436	45423923,45423381,45421393,45420427,45419197,45416897,45414960,45414034,45413745	Gene ID= ENSG00000012061.15 TPM= 6.76 Transcript Type= NA
chr19	45409614	45423839	45409614	45423839	-	ENST00000340192.11@ERCC1	ENST00000340192.11	protein_coding	45423781,45423270,45421178,45420324,45419098,45416821,45414861,45413677,45409614	45423839,45423381,45421393,45420427,45419197,45416897,45414960,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 4.83 Transcript Type= protein_coding
chr19	45409668	45424367	45409668	45424367	-	ENST00000589165.5@ERCC1	ENST00000589165.5	protein_coding	45423823,45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413677,45409668	45424367,45423381,45421393,45420427,45419197,45416897,45414960,45414034,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 17.38 Transcript Type= protein_coding
chr19	45483073	45485090	45483073	45485090	-	transcript4654.chr19.nnic@NA	transcript4654.chr19.nnic	NA	45483073	45485090	Gene ID= novel_gene_chr19_4655 TPM= 7.72 Transcript Type= NA
chr19	45485294	45497055	45485294	45497055	-	ENST00000344680.8@RTN2	ENST00000344680.8	protein_coding	45496792,45495095,45494526,45494166,45489346,45488848,45488637,45488471,45486055,45485294	45497055,45495139,45495005,45494420,45489553,45488986,45488706,45488517,45486113,45485789	Gene ID= ENSG00000125744.11 TPM= 12.55 Transcript Type= protein_coding
chr19	45485294	45493267	45485294	45493267	-	ENST00000430715.6@RTN2	ENST00000430715.6	protein_coding	45493160,45489346,45488848,45488637,45488471,45486055,45485294	45493267,45489553,45488986,45488706,45488517,45486113,45485789	Gene ID= ENSG00000125744.11 TPM= 83.98 Transcript Type= protein_coding
chr19	45507416	45526983	45507416	45526983	+	ENST00000245932.10@VASP	ENST00000245932.10	protein_coding	45507416,45517663,45517929,45521322,45522168,45522340,45522718,45523644,45523841,45524097,45524570,45525946,45526140	45507776,45517834,45518094,45521406,45522217,45522581,45522818,45523695,45523877,45524142,45524660,45526003,45526983	Gene ID= ENSG00000125753.13 TPM= 41.51 Transcript Type= protein_coding
chr19	45549156	45584811	45549156	45584811	-	transcript4648.chr19.nnic@OPA3	transcript4648.chr19.nnic	protein_coding	45584623,45551153,45549156	45584811,45553911,45549668	Gene ID= ENSG00000125741.4 TPM= 3.86 Transcript Type= NA
chr19	45527427	45584842	45527427	45584842	-	ENST00000323060.3@OPA3	ENST00000323060.3	protein_coding	45584623,45527427	45584842,45529456	Gene ID= ENSG00000125741.4 TPM= 1.93 Transcript Type= protein_coding
chr19	45546281	45584819	45546281	45584819	-	ENST00000263275.4@OPA3	ENST00000263275.4	protein_coding	45584623,45546281	45584819,45553911	Gene ID= ENSG00000125741.4 TPM= 4.83 Transcript Type= protein_coding
chr19	45687462	45691940	45687462	45691940	-	ENST00000587367.5@SNRPD2	ENST00000587367.5	protein_coding	45691887,45690572,45688387,45687462	45691940,45690667,45688566,45687727	Gene ID= ENSG00000125743.10 TPM= 23.49 Transcript Type= protein_coding
chr19	45687463	45691941	45687463	45691941	-	ENST00000391932.7@SNRPD2	ENST00000391932.7	protein_coding	45691887,45689233,45688387,45687463	45691941,45689347,45688566,45687727	Gene ID= ENSG00000125743.10 TPM= 21.56 Transcript Type= protein_coding
chr19	45687454	45692333	45687454	45692333	-	ENST00000342669.7@SNRPD2	ENST00000342669.7	protein_coding	45691887,45688387,45687454	45692333,45688566,45687727	Gene ID= ENSG00000125743.10 TPM= 167.32 Transcript Type= protein_coding
chr19	45764785	45769226	45764785	45769226	-	ENST00000317578.6@SIX5	ENST00000317578.6	protein_coding	45768042,45766350,45764785	45769226,45767155,45766111	Gene ID= ENSG00000177045.7 TPM= 15.44 Transcript Type= protein_coding
chr19	45768145	45772497	45768145	45772497	+	transcript4734.chr19.nnic@DM1-AS	transcript4734.chr19.nnic	antisense_RNA	45768145,45771490	45768836,45772497	Gene ID= ENSG00000267395.5 TPM= 1.93 Transcript Type= NA
chr19	45769717	45782504	45769717	45782504	-	transcript4679.chr19.nnic@DMPK	transcript4679.chr19.nnic	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717	45782504,45779869,45779522,45779359,45778641,45778220,45777723,45777590,45775034,45772752,45771928,45771665,45771396,45771056,45770640	Gene ID= ENSG00000104936.17 TPM= 11.27 Transcript Type= NA
chr19	45769717	45782520	45769717	45782520	-	transcript4680.chr19.nic@DMPK	transcript4680.chr19.nic	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717	45782520,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771056,45770640	Gene ID= ENSG00000104936.17 TPM= 63.08 Transcript Type= NA
chr19	45769717	45782478	45769717	45782478	-	ENST00000291270.8@DMPK	ENST00000291270.8	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717	45782478,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771060,45770640	Gene ID= ENSG00000104936.17 TPM= 131.36 Transcript Type= protein_coding
chr19	45769717	45782552	45769717	45782552	-	ENST00000588522.5@DMPK	ENST00000588522.5	protein_coding	45782193,45780323,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717	45782552,45780381,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771060,45770640	Gene ID= ENSG00000104936.17 TPM= 21.31 Transcript Type= nonsense_mediated_decay
chr19	45769736	45782479	45769736	45782479	-	ENST00000447742.6@DMPK	ENST00000447742.6	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777342,45774949,45772641,45771771,45771568,45771350,45770971,45769736	45782479,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771060,45770640	Gene ID= ENSG00000104936.17 TPM= 29.92 Transcript Type= protein_coding
chr19	45782984	45792963	45782984	45792963	-	transcript4727.chr19.nic@DMWD	transcript4727.chr19.nic	protein_coding	45792316,45790905,45782984	45792963,45791087,45786871	Gene ID= ENSG00000185800.11 TPM= 7.92 Transcript Type= NA
chr19	45789395	45790176	45789395	45790176	-	ENST00000602469.1@DMWD	ENST00000602469.1	protein_coding	45789395	45790176	Gene ID= ENSG00000185800.11 TPM= 3.86 Transcript Type= retained_intron
chr19	45782947	45792802	45782947	45792802	-	ENST00000377735.7@DMWD	ENST00000377735.7	protein_coding	45792316,45790905,45785594,45782947	45792802,45791087,45786871,45784290	Gene ID= ENSG00000185800.11 TPM= 4.18 Transcript Type= protein_coding
chr19	45783009	45792802	45783009	45792802	-	ENST00000270223.6@DMWD	ENST00000270223.6	protein_coding	45792316,45790905,45785594,45784641,45783009	45792802,45791087,45786871,45784715,45784290	Gene ID= ENSG00000185800.11 TPM= 20.59 Transcript Type= protein_coding
chr19	45815435	45863290	45815435	45863290	-	ENST00000245934.11@SYMPK	ENST00000245934.11	protein_coding	45863058,45854391,45854175,45852482,45852312,45848750,45847752,45844030,45842250,45838461,45835078,45831384,45830054,45828970,45827837,45827510,45826226,45825171,45823767,45823372,45822756,45821384,45817959,45816798,45816482,45815851,45815435	45863290,45854507,45854240,45852535,45852385,45848876,45848001,45844200,45842489,45838615,45835228,45831588,45830204,45829205,45827918,45827623,45826373,45825331,45823875,45823472,45822846,45821485,45818146,45816974,45816577,45816183,45815697	Gene ID= ENSG00000125755.18 TPM= 21.24 Transcript Type= protein_coding
chr19	45883607	45886170	45883607	45886170	-	ENST00000302165.4@IRF2BP1	ENST00000302165.4	protein_coding	45883607	45886170	Gene ID= ENSG00000170604.4 TPM= 35.72 Transcript Type= protein_coding
chr19	45995467	46018616	45995467	46018616	+	ENST00000595358.5@CCDC61	ENST00000595358.5	protein_coding	45995467,46003008,46003419,46006559,46008140,46015049,46015345,46016054,46016318,46016694,46016991,46017247,46018078,46018290	45995504,46003166,46003501,46006716,46008301,46015259,46015427,46016223,46016393,46016833,46017069,46017304,46018150,46018616	Gene ID= ENSG00000104983.8 TPM= 11.58 Transcript Type= protein_coding
chr19	46346994	46390852	46346994	46390852	+	ENST00000012443.8@PPP5C	ENST00000012443.8	protein_coding	46346994,46353748,46375604,46376453,46383411,46383780,46384804,46387093,46387366,46388408,46388553,46390051,46390284	46347217,46353989,46375751,46376574,46383476,46383878,46384909,46387235,46387453,46388448,46388731,46390132,46390852	Gene ID= ENSG00000011485.14 TPM= 89.29 Transcript Type= protein_coding
chr19	46347108	46390852	46347108	46390852	+	ENST00000391919.1@PPP5C	ENST00000391919.1	protein_coding	46347108,46353748,46375604,46376453,46383780,46384804,46387093,46387366,46388408,46388553,46390051,46390284	46347217,46353989,46375751,46376574,46383878,46384909,46387235,46387453,46388448,46388731,46390132,46390852	Gene ID= ENSG00000011485.14 TPM= 14.96 Transcript Type= protein_coding
chr19	46410372	46413584	46410372	46413584	-	ENST00000307522.3@CCDC8	ENST00000307522.3	protein_coding	46410372	46413584	Gene ID= ENSG00000169515.5 TPM= 1.93 Transcript Type= protein_coding
chr19	46601074	46609305	46601074	46609305	+	ENST00000391918.6@CALM3	ENST00000391918.6	protein_coding	46601074,46605827,46608197,46608482,46608846,46609125	46601176,46605857,46608340,46608588,46608981,46609305	Gene ID= ENSG00000160014.16 TPM= 11.58 Transcript Type= protein_coding
chr19	46601309	46609275	46601309	46609275	+	ENST00000477244.5@CALM3	ENST00000477244.5	protein_coding	46601309,46605827,46608199,46608482,46608846,46609125	46601437,46605857,46608340,46608588,46608981,46609275	Gene ID= ENSG00000160014.16 TPM= 93.64 Transcript Type= processed_transcript
chr19	46620468	46625118	46620468	46625118	-	ENST00000291294.6@PTGIR	ENST00000291294.6	protein_coding	46624997,46623458,46620468	46625118,46624237,46621672	Gene ID= ENSG00000160013.8 TPM= 3.86 Transcript Type= protein_coding
chr19	46719511	46746494	46719511	46746494	-	transcript4782.chr19.nic@STRN4	transcript4782.chr19.nic	protein_coding	46746149,46738785,46738164,46736823,46733816,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719511	46746494,46738888,46738237,46736901,46733875,46733236,46730873,46728777,46728007,46727567,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 27.75 Transcript Type= NA
chr19	46719511	46746881	46719511	46746881	-	ENST00000391910.7@STRN4	ENST00000391910.7	protein_coding	46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719511	46746881,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727567,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 43.68 Transcript Type= protein_coding
chr19	46719511	46746494	46719511	46746494	-	transcript4794.chr19.nic@STRN4	transcript4794.chr19.nic	protein_coding	46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46719511	46746494,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727567,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771	Gene ID= ENSG00000090372.14 TPM= 10.78 Transcript Type= NA
chr19	46719507	46746480	46719507	46746480	-	ENST00000263280.10@STRN4	ENST00000263280.10	protein_coding	46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719507	46746480,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727546,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 14.89 Transcript Type= protein_coding
chr19	46746046	46758485	46746046	46758485	+	ENST00000318584.9@FKRP	ENST00000318584.9	protein_coding	46746046,46748027,46748515,46755412	46746090,46748088,46748665,46758485	Gene ID= ENSG00000181027.10 TPM= 28.48 Transcript Type= protein_coding
chr19	46747388	46758393	46747388	46758393	+	transcript4811.chr19.nic@FKRP	transcript4811.chr19.nic	protein_coding	46747388,46755412	46748088,46758393	Gene ID= ENSG00000181027.10 TPM= 2.41 Transcript Type= NA
chr19	46747388	46749089	46747388	46749089	+	transcript4812.chr19.nic@FKRP	transcript4812.chr19.nic	protein_coding	46747388,46748515	46748088,46749089	Gene ID= ENSG00000181027.10 TPM= 5.79 Transcript Type= NA
chr19	46774883	46788594	46774883	46788594	-	ENST00000542575.6@SLC1A5	ENST00000542575.6	protein_coding	46787400,46784517,46784097,46782383,46778675,46777211,46776975,46774883	46788594,46784559,46784144,46782549,46778908,46777405,46777109,46775747	Gene ID= ENSG00000105281.12 TPM= 9.65 Transcript Type= protein_coding
chr19	46838158	46850316	46838158	46850316	-	ENST00000601498.5@AP2S1	ENST00000601498.5	protein_coding	46850134,46845993,46839465,46838740,46838158	46850316,46846142,46839578,46838799,46838548	Gene ID= ENSG00000042753.11 TPM= 6.11 Transcript Type= protein_coding
chr19	46838167	46850992	46838167	46850992	-	ENST00000263270.10@AP2S1	ENST00000263270.10	protein_coding	46850764,46845993,46839465,46838740,46838167	46850992,46846142,46839578,46838799,46838548	Gene ID= ENSG00000042753.11 TPM= 74.65 Transcript Type= protein_coding
chr19	46838136	46850777	46838136	46850777	-	ENST00000352203.8@AP2S1	ENST00000352203.8	protein_coding	46850764,46845993,46839465,46838740,46838136	46850777,46846142,46839620,46838799,46838548	Gene ID= ENSG00000042753.11 TPM= 2.25 Transcript Type= protein_coding
chr19	46943040	46945066	46943040	46945066	-	transcript4826.chr19.nnic@NA	transcript4826.chr19.nnic	NA	46944774,46943040	46945066,46943742	Gene ID= novel_gene_chr19_4827 TPM= 1.93 Transcript Type= NA
chr19	47000773	47004509	47000773	47004509	+	transcript4828.chr19.nnic@NA	transcript4828.chr19.nnic	NA	47000773	47004509	Gene ID= novel_gene_chr19_4829 TPM= 18.34 Transcript Type= NA
chr19	47045907	47048630	47045907	47048630	-	ENST00000253047.6@TMEM160	ENST00000253047.6	protein_coding	47048407,47046593,47045907	47048630,47046685,47046252	Gene ID= ENSG00000130748.6 TPM= 33.79 Transcript Type= protein_coding
chr19	47130910	47176492	47130910	47176492	+	transcript4844.chr19.nnic@SAE1	transcript4844.chr19.nnic	protein_coding	47130910,47143494,47150202,47152898,47155114,47169818,47176215	47131028,47143605,47150375,47153040,47155213,47169923,47176492	Gene ID= ENSG00000142230.11 TPM= 1.93 Transcript Type= NA
chr19	47130863	47210191	47130863	47210191	+	ENST00000270225.11@SAE1	ENST00000270225.11	protein_coding	47130863,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47209159	47131028,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47210191	Gene ID= ENSG00000142230.11 TPM= 64.68 Transcript Type= protein_coding
chr19	47256525	47274081	47256525	47274081	+	transcript4847.chr19.nnic@CCDC9	transcript4847.chr19.nnic	protein_coding	47256525,47258330,47258559,47260321,47260588,47264603,47264773,47266611,47270407,47270553,47271082,47271274,47272069,47273357,47273966	47256609,47258403,47258663,47260422,47260839,47264686,47264946,47266792,47270453,47270688,47271187,47271649,47272161,47273406,47274081	Gene ID= ENSG00000105321.12 TPM= 6.27 Transcript Type= NA
chr19	47256459	47271953	47256459	47271953	+	ENST00000221922.10@CCDC9	ENST00000221922.10	protein_coding	47256459,47258330,47258559,47260321,47260588,47264603,47264773,47266611,47270407,47270553,47271082,47271274	47256609,47258403,47258663,47260422,47260839,47264686,47264946,47266792,47270453,47270688,47271187,47271953	Gene ID= ENSG00000105321.12 TPM= 15.93 Transcript Type= protein_coding
chr19	47274385	47275708	47274385	47275708	+	transcript4852.chr19.nnic@INAFM1	transcript4852.chr19.nnic	protein_coding	47274385,47275047	47274498,47275708	Gene ID= ENSG00000257704.3 TPM= 5.79 Transcript Type= NA
chr19	47349281	47382704	47349281	47382704	+	ENST00000328771.8@DHX34	ENST00000328771.8	protein_coding	47349281,47352754,47355039,47357866,47359968,47362476,47366981,47372730,47373599,47375466,47375924,47376443,47377100,47379710,47380816,47381186,47381980	47349352,47353735,47355350,47358120,47360070,47362693,47367155,47372923,47373700,47375708,47376097,47376560,47377206,47379985,47380992,47381324,47382704	Gene ID= ENSG00000134815.18 TPM= 9.65 Transcript Type= protein_coding
chr19	47475144	47484268	47475144	47484268	-	ENST00000338134.7@KPTN	ENST00000338134.7	protein_coding	47483935,47483502,47483295,47483161,47480958,47480760,47480298,47479863,47477706,47476803,47476532,47475144	47484268,47483584,47483379,47483215,47481033,47480833,47480407,47479940,47477781,47476938,47476714,47475544	Gene ID= ENSG00000118162.13 TPM= 11.58 Transcript Type= protein_coding
chr19	47475144	47484252	47475144	47484252	-	transcript4858.chr19.nic@KPTN	transcript4858.chr19.nic	protein_coding	47483935,47483161,47480958,47480760,47480298,47479863,47477706,47476803,47476532,47475144	47484252,47483215,47481033,47480833,47480407,47479940,47477781,47476938,47476714,47475544	Gene ID= ENSG00000118162.13 TPM= 2.9 Transcript Type= NA
chr19	47484282	47496382	47484282	47496382	+	ENST00000593284.5@NAPA-AS1	ENST00000593284.5	antisense_RNA	47484282,47493447,47495028	47484524,47493601,47496382	Gene ID= ENSG00000268061.5 TPM= 1.93 Transcript Type= antisense_RNA
chr19	47487637	47515091	47487637	47515091	-	transcript4863.chr19.nnic@NAPA	transcript4863.chr19.nnic	protein_coding	47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487856,47487637	47515091,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389,47487801	Gene ID= ENSG00000105402.7 TPM= 6.54 Transcript Type= NA
chr19	47487642	47515091	47487642	47515091	-	transcript4867.chr19.nic@NAPA	transcript4867.chr19.nic	protein_coding	47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47488235,47487642	47515091,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389,47487890	Gene ID= ENSG00000105402.7 TPM= 14.01 Transcript Type= NA
chr19	47487637	47515240	47487637	47515240	-	ENST00000263354.7@NAPA	ENST00000263354.7	protein_coding	47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487637	47515240,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389	Gene ID= ENSG00000105402.7 TPM= 195.42 Transcript Type= protein_coding
chr19	47487680	47515058	47487680	47515058	-	ENST00000594001.5@NAPA	ENST00000594001.5	protein_coding	47514843,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487680	47515058,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389	Gene ID= ENSG00000105402.7 TPM= 1.56 Transcript Type= nonsense_mediated_decay
chr19	47493646	47494754	47493646	47494754	+	transcript4878.chr19.nnic@NA	transcript4878.chr19.nnic	NA	47493646	47494754	Gene ID= novel_gene_chr19_4879 TPM= 4.83 Transcript Type= NA
chr19	47607872	47608734	47607872	47608734	-	transcript4881.chr19.nnic@NA	transcript4881.chr19.nnic	NA	47607872	47608734	Gene ID= novel_gene_chr19_4882 TPM= 6.76 Transcript Type= NA
chr19	47699965	47703276	47699965	47703276	+	ENST00000602258.1@BICRA	ENST00000602258.1	protein_coding	47699965	47703276	Gene ID= ENSG00000063169.10 TPM= 26.06 Transcript Type= retained_intron
chr19	47608196	47703277	47608196	47703277	+	ENST00000396720.7@BICRA	ENST00000396720.7	protein_coding	47608196,47670443,47673570,47673720,47675851,47679321,47681976,47694115,47694900,47695365,47696451,47698634,47698965,47699303,47701328	47608282,47670544,47673615,47673762,47675916,47681276,47682152,47694726,47695080,47695474,47696512,47698782,47699059,47699405,47703277	Gene ID= ENSG00000063169.10 TPM= 5.79 Transcript Type= protein_coding
chr19	47713343	47743134	47713343	47743134	+	ENST00000263277.7@EHD2	ENST00000263277.7	protein_coding	47713343,47716558,47718509,47725812,47736369,47740881	47713538,47717016,47718606,47726224,47736533,47743134	Gene ID= ENSG00000024422.11 TPM= 51.16 Transcript Type= protein_coding
chr19	47745522	47757058	47745522	47757058	+	ENST00000246802.9@NOP53	ENST00000246802.9	protein_coding	47745522,47746967,47750178,47750908,47751520,47752512,47754527,47754709,47755348,47755756,47756528,47756688,47756999	47745783,47747031,47750286,47751107,47751590,47752607,47754631,47754891,47755523,47755822,47756604,47756744,47757058	Gene ID= ENSG00000105373.18 TPM= 449.83 Transcript Type= protein_coding
chr19	47782180	47784682	47782180	47784682	+	ENST00000602163.1@SELENOW	ENST00000602163.1	protein_coding	47782180	47784682	Gene ID= ENSG00000178980.14 TPM= 2.9 Transcript Type= retained_intron
chr19	47778572	47784681	47778572	47784681	+	ENST00000601048.5@SELENOW	ENST00000601048.5	protein_coding	47778572,47780725,47780864,47781108,47781290,47784290	47778814,47780749,47780917,47781182,47781388,47784681	Gene ID= ENSG00000178980.14 TPM= 752.94 Transcript Type= protein_coding
chr19	48061574	48110817	48061574	48110817	-	transcript4913.chr19.nnic@PLA2G4C	transcript4913.chr19.nnic	protein_coding	48110487,48106522,48105333,48104588,48099671,48098139,48095464,48090364,48088686,48085059,48077771,48074767,48067791,48061998,48061574	48110817,48106561,48105444,48104724,48099860,48098259,48095604,48090417,48088712,48085112,48077824,48074874,48067886,48062152,48061668	Gene ID= ENSG00000105499.13 TPM= 2.9 Transcript Type= NA
chr19	48092905	48110817	48092905	48110817	-	transcript4917.chr19.nnic@PLA2G4C	transcript4917.chr19.nnic	protein_coding	48110487,48106522,48105333,48104588,48099671,48098139,48095464,48092905	48110817,48106561,48105444,48104724,48099860,48098259,48095604,48094198	Gene ID= ENSG00000105499.13 TPM= 1.93 Transcript Type= NA
chr19	48047844	48110782	48047844	48110782	-	ENST00000354276.7@PLA2G4C	ENST00000354276.7	protein_coding	48110487,48106522,48105333,48104588,48099671,48098139,48095464,48090364,48088686,48085059,48077771,48074767,48067791,48061998,48054878,48052954,48047844	48110782,48106561,48105444,48104724,48099860,48098259,48095604,48090417,48088712,48085112,48077824,48074874,48067886,48062152,48055049,48053147,48048388	Gene ID= ENSG00000105499.13 TPM= 9.65 Transcript Type= protein_coding
chr19	48047846	48051188	48047846	48051188	-	transcript4918.chr19.nnic@NA	transcript4918.chr19.nnic	NA	48047846	48051188	Gene ID= novel_gene_chr19_4919 TPM= 1.93 Transcript Type= NA
chr19	48255675	48258199	48255675	48258199	+	ENST00000602172.1@CARD8-AS1	ENST00000602172.1	antisense_RNA	48255675,48256351	48255794,48258199	Gene ID= ENSG00000268001.1 TPM= 2.9 Transcript Type= antisense_RNA
chr19	48325325	48330553	48325325	48330553	+	ENST00000270221.10@EMP3	ENST00000270221.10	protein_coding	48325325,48326830,48327521,48329352,48330301	48325610,48326922,48327623,48329492,48330553	Gene ID= ENSG00000142227.10 TPM= 18.82 Transcript Type= protein_coding
chr19	48325347	48330553	48325347	48330553	+	ENST00000596315.5@EMP3	ENST00000596315.5	protein_coding	48325347,48327521,48329352,48330301	48325610,48327623,48329492,48330553	Gene ID= ENSG00000142227.10 TPM= 3.38 Transcript Type= protein_coding
chr19	48332361	48363939	48332361	48363939	-	transcript4928.chr19.nnic@TMEM143	transcript4928.chr19.nnic	protein_coding	48363898,48363291,48360072,48345160,48343321,48342530,48334008,48333372,48332361	48363939,48363531,48360176,48345354,48343451,48342809,48334197,48333433,48332817	Gene ID= ENSG00000161558.10 TPM= 4.83 Transcript Type= NA
chr19	48332356	48364237	48332356	48364237	-	ENST00000293261.7@TMEM143	ENST00000293261.7	protein_coding	48363898,48363291,48360072,48345160,48343321,48342530,48334008,48332356	48364237,48363531,48360176,48345354,48343451,48342809,48334197,48333433	Gene ID= ENSG00000161558.10 TPM= 47.3 Transcript Type= protein_coding
chr19	48382570	48391553	48382570	48391553	-	ENST00000330720.6@KDELR1	ENST00000330720.6	protein_coding	48391268,48390424,48389553,48384230,48382570	48391553,48390524,48389711,48384482,48383327	Gene ID= ENSG00000105438.8 TPM= 47.3 Transcript Type= protein_coding
chr19	48382578	48390855	48382578	48390855	-	ENST00000597017.5@KDELR1	ENST00000597017.5	protein_coding	48390424,48389553,48384230,48382578	48390855,48389711,48384482,48383327	Gene ID= ENSG00000105438.8 TPM= 8.69 Transcript Type= protein_coding
chr19	48445773	48457022	48445773	48457022	+	ENST00000253237.9@GRWD1	ENST00000253237.9	protein_coding	48445773,48446385,48446681,48450313,48450666,48451034,48452708	48446192,48446502,48446843,48450526,48450808,48451231,48457022	Gene ID= ENSG00000105447.12 TPM= 19.31 Transcript Type= protein_coding
chr19	48469221	48479382	48469221	48479382	+	transcript4949.chr19.nnic@CYTH2	transcript4949.chr19.nnic	protein_coding	48469221,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123	48469526,48470471,48470669,48472443,48473378,48474017,48474330,48474949,48478145,48478346,48478592,48479382	Gene ID= ENSG00000105443.14 TPM= 3.86 Transcript Type= NA
chr19	48469032	48482314	48469032	48482314	+	ENST00000452733.6@CYTH2	ENST00000452733.6	protein_coding	48469032,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123	48469526,48470500,48470669,48472443,48473378,48474017,48474330,48474949,48478145,48478346,48478592,48482314	Gene ID= ENSG00000105443.14 TPM= 51.16 Transcript Type= protein_coding
chr19	48469321	48479365	48469321	48479365	+	ENST00000391881.7@CYTH2	ENST00000391881.7	protein_coding	48469321,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123	48469526,48470500,48470669,48472443,48473378,48474017,48474330,48474953,48478145,48478346,48478592,48479365	Gene ID= ENSG00000105443.14 TPM= 55.99 Transcript Type= nonsense_mediated_decay
chr19	48615328	48619536	48615328	48619536	-	ENST00000549920.5@RPL18	ENST00000549920.5	protein_coding	48619141,48617791,48617316,48616726,48616079,48615877,48615328	48619536,48617877,48617423,48616824,48616202,48615946,48615447	Gene ID= ENSG00000063177.12 TPM= 217.68 Transcript Type= protein_coding
chr19	48615332	48619175	48615332	48619175	-	ENST00000547892.1@RPL18	ENST00000547892.1	protein_coding	48615332	48619175	Gene ID= ENSG00000063177.12 TPM= 1.93 Transcript Type= retained_intron
chr19	48615331	48617884	48615331	48617884	-	ENST00000084795.9@RPL18	ENST00000084795.9	protein_coding	48617791,48617316,48616726,48616079,48615877,48615331	48617884,48617423,48616824,48616202,48615946,48615447	Gene ID= ENSG00000063177.12 TPM= 37.16 Transcript Type= protein_coding
chr19	48619291	48630405	48619291	48630405	+	ENST00000245222.8@SPHK2	ENST00000245222.8	protein_coding	48619291,48620402,48625891,48627692,48627975,48628162,48628681	48619543,48620553,48626362,48627841,48628069,48628277,48630405	Gene ID= ENSG00000063176.15 TPM= 7.24 Transcript Type= protein_coding
chr19	48624374	48630405	48624374	48630405	+	transcript4962.chr19.nic@SPHK2	transcript4962.chr19.nic	protein_coding	48624374,48625891,48627692,48627975,48628162,48628681	48624430,48626362,48627841,48628069,48628277,48630405	Gene ID= ENSG00000063176.15 TPM= 4.34 Transcript Type= NA
chr19	48712742	48719948	48712742	48719948	-	transcript4976.chr19.nic@MAMSTR	transcript4976.chr19.nic	protein_coding	48719679,48718974,48716705,48715625,48715262,48714806,48713860,48713716,48712742	48719948,48719052,48716743,48715767,48715446,48714908,48714045,48713770,48713550	Gene ID= ENSG00000176909.11 TPM= 1.93 Transcript Type= NA
chr19	48712997	48719727	48712997	48719727	-	transcript4979.chr19.nic@MAMSTR	transcript4979.chr19.nic	protein_coding	48719679,48718974,48716705,48715625,48715262,48714806,48713860,48713716,48712997	48719727,48719052,48716743,48715917,48715446,48714908,48714045,48713770,48713550	Gene ID= ENSG00000176909.11 TPM= 1.93 Transcript Type= NA
chr19	48720587	48740721	48720587	48740721	-	ENST00000222145.8@RASIP1	ENST00000222145.8	protein_coding	48740521,48740146,48738960,48735196,48728937,48727393,48727007,48726785,48724717,48724337,48721854,48720587	48740721,48740286,48739645,48735551,48729590,48727430,48727158,48726888,48724960,48724509,48722001,48720997	Gene ID= ENSG00000105538.9 TPM= 27.99 Transcript Type= protein_coding
chr19	48795066	48811514	48795066	48811514	-	transcript4992.chr19.nnic@BCAT2	transcript4992.chr19.nnic	protein_coding	48811278,48810984,48807000,48806517,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795066	48811514,48811180,48807074,48806717,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464	Gene ID= ENSG00000105552.14 TPM= 9.49 Transcript Type= NA
chr19	48795062	48811012	48795062	48811012	-	ENST00000545387.6@BCAT2	ENST00000545387.6	protein_coding	48810984,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795062	48811012,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464	Gene ID= ENSG00000105552.14 TPM= 2.73 Transcript Type= protein_coding
chr19	48795066	48811020	48795066	48811020	-	ENST00000316273.10@BCAT2	ENST00000316273.10	protein_coding	48810984,48807000,48806517,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795066	48811020,48807074,48806717,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464	Gene ID= ENSG00000105552.14 TPM= 17.69 Transcript Type= protein_coding
chr19	48795110	48810916	48795110	48810916	-	ENST00000597011.5@BCAT2	ENST00000597011.5	protein_coding	48810809,48807000,48806517,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795110	48810916,48807074,48806717,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464	Gene ID= ENSG00000105552.14 TPM= 4.83 Transcript Type= protein_coding
chr19	48872392	48876057	48872392	48876057	+	ENST00000200453.5@PPP1R15A	ENST00000200453.5	protein_coding	48872392,48873225,48875614	48872651,48874898,48876057	Gene ID= ENSG00000087074.7 TPM= 705.64 Transcript Type= protein_coding
chr19	48900050	48923372	48900050	48923372	+	ENST00000405315.8@NUCB1	ENST00000405315.8	protein_coding	48900050,48900786,48904347,48905753,48911149,48913011,48913474,48918726,48919030,48919194,48921154,48921827,48922318	48900372,48900931,48904454,48905885,48911252,48913196,48913564,48918784,48919122,48919286,48921324,48921932,48923372	Gene ID= ENSG00000104805.15 TPM= 5.79 Transcript Type= protein_coding
chr19	48954877	48961798	48954877	48961798	+	ENST00000345358.11@BAX	ENST00000345358.11	protein_coding	48954877,48955548,48955687,48956198,48960810,48961532	48954962,48955599,48955833,48956333,48960914,48961798	Gene ID= ENSG00000087088.19 TPM= 1.93 Transcript Type= protein_coding
chr19	48965301	48966878	48965301	48966878	+	ENST00000331825.10@FTL	ENST00000331825.10	protein_coding	48965301,48965770,48966281,48966583	48965609,48965916,48966406,48966878	Gene ID= ENSG00000087086.14 TPM= 1409.84 Transcript Type= protein_coding
chr19	48968130	48993332	48968130	48993332	-	transcript5042.chr19.nnic@GYS1	transcript5042.chr19.nnic	protein_coding	48992995,48991302,48987194,48985850,48985461,48982720,48982248,48981530,48978098,48977924,48974620,48974213,48970928,48970546,48969775,48968130	48993332,48991483,48987385,48986035,48985605,48982837,48982375,48981630,48978157,48978002,48974733,48974339,48971023,48970709,48969855,48969611	Gene ID= ENSG00000104812.14 TPM= 42.96 Transcript Type= NA
chr19	48968125	48993309	48968125	48993309	-	ENST00000323798.7@GYS1	ENST00000323798.7	protein_coding	48992995,48991302,48987194,48985850,48985461,48982720,48982255,48981530,48978098,48977924,48974620,48974213,48970928,48970546,48969775,48968125	48993309,48991483,48987385,48986035,48985605,48982837,48982375,48981636,48978157,48978002,48974733,48974339,48971023,48970709,48969855,48969611	Gene ID= ENSG00000104812.14 TPM= 68.05 Transcript Type= protein_coding
chr19	48993448	49015995	48993448	49015995	+	ENST00000595090.5@RUVBL2	ENST00000595090.5	protein_coding	48993448,48999319,49003279,49004277,49007018,49007302,49009776,49009973,49010488,49010999,49011192,49014484,49015021,49015572,49015817	48993923,48999373,49003334,49004418,49007147,49007368,49009882,49010066,49010611,49011093,49011310,49014603,49015150,49015686,49015995	Gene ID= ENSG00000183207.13 TPM= 119.05 Transcript Type= protein_coding
chr19	48993899	49015926	48993899	49015926	+	ENST00000221413.10@RUVBL2	ENST00000221413.10	protein_coding	48993899,48999319,49003279,49004277,49007018,49007302,49009776,49009973,49010488,49010999,49011192,49014484,49015021,49015572,49015817	48993923,48999373,49003334,49004418,49007147,49007368,49009871,49010066,49010611,49011093,49011310,49014603,49015150,49015686,49015926	Gene ID= ENSG00000183207.13 TPM= 114.87 Transcript Type= nonsense_mediated_decay
chr19	48999319	49015894	48999319	49015894	+	ENST00000594338.1@RUVBL2	ENST00000594338.1	protein_coding	48999319,49003279,49004277,49007018,49007302,49009776,49009973,49010999,49011192,49014484,49015021,49015572,49015817	48999373,49003334,49004418,49007147,49007368,49009882,49010611,49011093,49011310,49014603,49015150,49015686,49015894	Gene ID= ENSG00000183207.13 TPM= 1.28 Transcript Type= retained_intron
chr19	49037023	49037138	49037023	49037138	+	transcript5087.chr19.nnic@NA	transcript5087.chr19.nnic	NA	49037023	49037138	Gene ID= novel_gene_chr19_5088 TPM= 2.9 Transcript Type= NA
chr19	49061128	49061961	49061128	49061961	-	transcript5089.chr19.nnic@NA	transcript5089.chr19.nnic	NA	49061128	49061961	Gene ID= novel_gene_chr19_5090 TPM= 1.93 Transcript Type= NA
chr19	49066221	49068385	49066221	49068385	-	transcript5091.chr19.nnic@NA	transcript5091.chr19.nnic	NA	49066221	49068385	Gene ID= novel_gene_chr19_5092 TPM= 2.9 Transcript Type= NA
chr19	49085432	49108602	49085432	49108602	+	transcript5067.chr19.nic@SNRNP70	transcript5067.chr19.nic	protein_coding	49085432,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49107625,49107795	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108602	Gene ID= ENSG00000104852.14 TPM= 90.53 Transcript Type= NA
chr19	49085440	49108605	49085440	49108605	+	transcript5068.chr19.nic@SNRNP70	transcript5068.chr19.nic	protein_coding	49085440,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49107625,49107822	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108605	Gene ID= ENSG00000104852.14 TPM= 61.62 Transcript Type= NA
chr19	49085451	49108603	49085451	49108603	+	ENST00000401730.5@SNRNP70	ENST00000401730.5	protein_coding	49085451,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49104634,49107625,49107795	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49103587,49104735,49107712,49108603	Gene ID= ENSG00000104852.14 TPM= 5.58 Transcript Type= nonsense_mediated_decay
chr19	49085419	49108598	49085419	49108598	+	ENST00000601065.5@SNRNP70	ENST00000601065.5	protein_coding	49085419,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49104634,49107625,49107795	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49102173,49104735,49107712,49108598	Gene ID= ENSG00000104852.14 TPM= 28.02 Transcript Type= nonsense_mediated_decay
chr19	49085451	49108563	49085451	49108563	+	ENST00000221448.9@SNRNP70	ENST00000221448.9	protein_coding	49085451,49086405,49090291,49090466,49098427,49098642,49101390,49104634,49107625,49107822	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108563	Gene ID= ENSG00000104852.14 TPM= 28.16 Transcript Type= protein_coding
chr19	49114348	49118460	49114348	49118460	+	transcript5093.chr19.nnic@LIN7B	transcript5093.chr19.nnic	protein_coding	49114348,49114849,49115213,49115825,49116263,49117855,49118352	49114441,49114967,49115331,49116024,49116472,49118018,49118460	Gene ID= ENSG00000104863.11 TPM= 1.93 Transcript Type= NA
chr19	49114348	49118460	49114348	49118460	+	transcript5099.chr19.nnic@LIN7B	transcript5099.chr19.nnic	protein_coding	49114348,49114849,49116263,49117855,49118352	49114441,49114967,49116472,49118018,49118460	Gene ID= ENSG00000104863.11 TPM= 3.86 Transcript Type= NA
chr19	49114361	49118460	49114361	49118460	+	ENST00000221459.6@LIN7B	ENST00000221459.6	protein_coding	49114361,49114849,49115260,49116263,49117855,49118352	49114441,49114967,49115331,49116472,49118018,49118460	Gene ID= ENSG00000104863.11 TPM= 19.31 Transcript Type= protein_coding
chr19	49151044	49155496	49151044	49155496	-	transcript5106.chr19.nnic@HRC	transcript5106.chr19.nnic	protein_coding	49153407,49153261,49152310,49152004,49151517,49151198,49151044	49155496,49153331,49152378,49152058,49151553,49151332,49151050	Gene ID= ENSG00000130528.11 TPM= 36.54 Transcript Type= NA
chr19	49151198	49155424	49151198	49155424	-	ENST00000252825.8@HRC	ENST00000252825.8	protein_coding	49153407,49153261,49152310,49152004,49151517,49151198	49155424,49153331,49152378,49152058,49151553,49151332	Gene ID= ENSG00000130528.11 TPM= 226.06 Transcript Type= protein_coding
chr19	49157792	49159921	49157792	49159921	+	ENST00000599628.5@TRPM4	ENST00000599628.5	protein_coding	49157792,49158192	49157890,49159921	Gene ID= ENSG00000130529.15 TPM= 9.65 Transcript Type= protein_coding
chr19	49340595	49362402	49340595	49362402	-	transcript5150.chr19.nic@TEAD2	transcript5150.chr19.nic	protein_coding	49362373,49359844,49359435,49357252,49355959,49355312,49355148,49351301,49348703,49347190,49343231,49342438,49340595	49362402,49360081,49359499,49357314,49355970,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437	Gene ID= ENSG00000074219.13 TPM= 13.03 Transcript Type= NA
chr19	49340595	49362457	49340595	49362457	-	ENST00000311227.6@TEAD2	ENST00000311227.6	protein_coding	49362373,49359844,49359435,49357252,49355312,49355148,49351301,49348703,49347190,49343231,49342438,49340595	49362457,49360081,49359499,49357314,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437	Gene ID= ENSG00000074219.13 TPM= 13.03 Transcript Type= protein_coding
chr19	49446299	49451832	49446299	49451832	-	transcript5174.chr19.nic@PIH1D1	transcript5174.chr19.nic	protein_coding	49451485,49450782,49447827,49447338,49447024,49446551,49446299	49451832,49450939,49449654,49447467,49447099,49446694,49446423	Gene ID= ENSG00000104872.10 TPM= 3.38 Transcript Type= NA
chr19	49446299	49451810	49446299	49451810	-	ENST00000262265.9@PIH1D1	ENST00000262265.9	protein_coding	49451485,49450782,49449475,49448001,49447827,49447338,49447024,49446551,49446299	49451810,49450848,49449654,49448062,49447908,49447467,49447099,49446694,49446423	Gene ID= ENSG00000104872.10 TPM= 31.37 Transcript Type= protein_coding
chr19	49453169	49471048	49453169	49471048	+	ENST00000293350.8@ALDH16A1	ENST00000293350.8	protein_coding	49453169,49458486,49458960,49459670,49460822,49461619,49461884,49462570,49463854,49464127,49464417,49464632,49465738,49466082,49468381,49468864,49470306	49453421,49458588,49459086,49459848,49460899,49461800,49462036,49462755,49463949,49464263,49464522,49464762,49465905,49466283,49468566,49468986,49471048	Gene ID= ENSG00000161618.9 TPM= 13.51 Transcript Type= protein_coding
chr19	49474228	49486231	49474228	49486231	+	ENST00000596435.5@FLT3LG	ENST00000596435.5	protein_coding	49474228,49474603,49475691,49476145,49476423,49478963,49480298,49480552,49485964	49474281,49474672,49475801,49476198,49476566,49479047,49480476,49480620,49486231	Gene ID= ENSG00000090554.12 TPM= 2.9 Transcript Type= protein_coding
chr19	49487603	49492308	49487603	49492308	+	ENST00000624069.3@RPL13A	ENST00000624069.3	protein_coding	49487603,49489850,49490232,49490475,49490779,49491040,49491425,49491729	49487644,49489912,49490297,49490576,49490864,49491099,49491547,49492308	Gene ID= ENSG00000142541.16 TPM= 23.97 Transcript Type= nonsense_mediated_decay
chr19	49487554	49492308	49487554	49492308	+	ENST00000391857.8@RPL13A	ENST00000391857.8	protein_coding	49487554,49489850,49490232,49490475,49490779,49491040,49491425,49491729	49487644,49489922,49490297,49490576,49490864,49491099,49491547,49492308	Gene ID= ENSG00000142541.16 TPM= 1169.79 Transcript Type= protein_coding
chr19	49487634	49491843	49487634	49491843	+	ENST00000467825.2@RPL13A	ENST00000467825.2	protein_coding	49487634,49489850,49490232,49490475,49490779,49491040,49491425,49491729	49487644,49489922,49490297,49490600,49490864,49491099,49491547,49491843	Gene ID= ENSG00000142541.16 TPM= 929.91 Transcript Type= protein_coding
chr19	49496374	49499689	49496374	49499689	+	ENST00000270625.6@RPS11	ENST00000270625.6	protein_coding	49496374,49497194,49497520,49497917,49499512	49496471,49497325,49497595,49498046,49499689	Gene ID= ENSG00000142534.6 TPM= 210.27 Transcript Type= protein_coding
chr19	49496466	49499688	49496466	49499688	+	ENST00000601306.1@RPS11	ENST00000601306.1	protein_coding	49496466,49497194,49497520,49497917,49499512	49496497,49497325,49497595,49498046,49499688	Gene ID= ENSG00000142534.6 TPM= 20.59 Transcript Type= nonsense_mediated_decay
chr19	49496431	49499689	49496431	49499689	+	ENST00000602252.5@RPS11	ENST00000602252.5	protein_coding	49496431,49497194,49497917,49499512	49496471,49497595,49498046,49499689	Gene ID= ENSG00000142534.6 TPM= 13.35 Transcript Type= retained_intron
chr19	49512279	49526333	49512279	49526333	+	ENST00000221466.9@FCGRT	ENST00000221466.9	protein_coding	49512279,49513387,49513882,49514211,49524507,49525457,49526010	49512750,49513473,49514133,49514486,49524776,49525573,49526333	Gene ID= ENSG00000104870.12 TPM= 31.37 Transcript Type= protein_coding
chr19	49513154	49526333	49513154	49526333	+	ENST00000426395.7@FCGRT	ENST00000426395.7	protein_coding	49513154,49513882,49514211,49524507,49525457,49526010	49513473,49514133,49514486,49524776,49525573,49526333	Gene ID= ENSG00000104870.12 TPM= 25.58 Transcript Type= protein_coding
chr19	49513171	49526333	49513171	49526333	+	transcript5203.chr19.nnic@FCGRT	transcript5203.chr19.nnic	protein_coding	49513171,49513882,49514211,49524507,49526010	49513473,49514133,49514486,49524776,49526333	Gene ID= ENSG00000104870.12 TPM= 1.93 Transcript Type= NA
chr19	49513379	49526329	49513379	49526329	+	ENST00000596975.5@FCGRT	ENST00000596975.5	protein_coding	49513379,49513882,49524507,49525457,49526010	49513473,49514133,49524776,49525573,49526329	Gene ID= ENSG00000104870.12 TPM= 2.9 Transcript Type= protein_coding
chr19	49525628	49526331	49525628	49526331	+	transcript5205.chr19.nnic@NA	transcript5205.chr19.nnic	NA	49525628	49526331	Gene ID= novel_gene_chr19_5206 TPM= 2.9 Transcript Type= NA
chr19	49555711	49580572	49555711	49580572	-	ENST00000596358.5@NOSIP	ENST00000596358.5	protein_coding	49580515,49560622,49559934,49558897,49557090,49556875,49556549,49556317,49555711	49580572,49560692,49560039,49558978,49557249,49556993,49556736,49556425,49555822	Gene ID= ENSG00000142546.13 TPM= 24.13 Transcript Type= protein_coding
chr19	49635292	49640201	49635292	49640201	-	ENST00000246792.3@RRAS	ENST00000246792.3	protein_coding	49639946,49637043,49636824,49636619,49635734,49635292	49640201,49637130,49636926,49636727,49635852,49635660	Gene ID= ENSG00000126458.3 TPM= 64.68 Transcript Type= protein_coding
chr19	49659572	49665875	49659572	49665875	-	ENST00000377139.7@IRF3	ENST00000377139.7	protein_coding	49665631,49664674,49663343,49663188,49662425,49661948,49660713,49659572	49665875,49664846,49663514,49663258,49662617,49662328,49660828,49659833	Gene ID= ENSG00000126456.15 TPM= 1.93 Transcript Type= protein_coding
chr19	49659579	49665705	49659579	49665705	-	ENST00000593922.5@IRF3	ENST00000593922.5	protein_coding	49665631,49664443,49663343,49663188,49662425,49661948,49660713,49659579	49665705,49664673,49663514,49663258,49662617,49662328,49660828,49659833	Gene ID= ENSG00000126456.15 TPM= 3.86 Transcript Type= protein_coding
chr19	49665566	49673916	49665566	49673916	+	ENST00000246785.7@BCL2L12	ENST00000246785.7	protein_coding	49665566,49666685,49667019,49668851,49669024,49670216,49673698	49666067,49666799,49667161,49668937,49669115,49670488,49673916	Gene ID= ENSG00000126453.9 TPM= 1.45 Transcript Type= protein_coding
chr19	49665961	49673916	49665961	49673916	+	ENST00000598979.5@BCL2L12	ENST00000598979.5	protein_coding	49665961,49666685,49668851,49669024,49670216,49673698	49666067,49666799,49668937,49669115,49670488,49673916	Gene ID= ENSG00000126453.9 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chr19	49672746	49673915	49672746	49673915	+	transcript5227.chr19.nnic@NA	transcript5227.chr19.nnic	NA	49672746	49673915	Gene ID= novel_gene_chr19_5228 TPM= 5.79 Transcript Type= NA
chr19	49677230	49688447	49677230	49688447	+	transcript5230.chr19.nic@PRMT1	transcript5230.chr19.nic	protein_coding	49677230,49679872,49680140,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605,49688162	49677316,49679929,49680238,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49686726,49688447	Gene ID= ENSG00000126457.21 TPM= 10.38 Transcript Type= NA
chr19	49677152	49688447	49677152	49688447	+	ENST00000391851.8@PRMT1	ENST00000391851.8	protein_coding	49677152,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605,49688162	49677316,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49686726,49688447	Gene ID= ENSG00000126457.21 TPM= 104.98 Transcript Type= protein_coding
chr19	49677272	49688447	49677272	49688447	+	ENST00000454376.6@PRMT1	ENST00000454376.6	protein_coding	49677272,49679872,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605,49688162	49677316,49679925,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49686726,49688447	Gene ID= ENSG00000126457.21 TPM= 46.09 Transcript Type= protein_coding
chr19	49766968	49807112	49766968	49807112	+	ENST00000354293.9@AP2A1	ENST00000354293.9	protein_coding	49766968,49781757,49781947,49782531,49791935,49792991,49795630,49798802,49799327,49799629,49799968,49800961,49801390,49801722,49801981,49802949,49803107,49803287,49805453,49805661,49805872,49806119,49806681	49767200,49781825,49782089,49782724,49792064,49793092,49795738,49798952,49799495,49799766,49800150,49801058,49801621,49801889,49802141,49803005,49803189,49803376,49805576,49805777,49805941,49806253,49807112	Gene ID= ENSG00000196961.12 TPM= 99.43 Transcript Type= protein_coding
chr19	49767134	49807110	49767134	49807110	+	ENST00000359032.9@AP2A1	ENST00000359032.9	protein_coding	49767134,49781757,49781947,49782531,49791935,49792991,49795630,49798802,49799327,49799629,49799968,49800961,49801390,49801722,49801981,49802534,49802949,49803107,49803287,49805453,49805661,49805872,49806119,49806681	49767200,49781825,49782089,49782724,49792064,49793092,49795738,49798952,49799495,49799766,49800150,49801058,49801621,49801889,49802141,49802599,49803005,49803189,49803376,49805576,49805777,49805941,49806253,49807110	Gene ID= ENSG00000196961.12 TPM= 34.75 Transcript Type= protein_coding
chr19	49806869	49813301	49806869	49813301	-	transcript5260.chr19.nic@FUZ	transcript5260.chr19.nic	protein_coding	49812996,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806869	49813301,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 3.86 Transcript Type= NA
chr19	49806869	49809533	49806869	49809533	-	transcript5272.chr19.nnic@FUZ	transcript5272.chr19.nnic	protein_coding	49809163,49808574,49808414,49806869	49809533,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 2.9 Transcript Type= NA
chr19	49806897	49813270	49806897	49813270	-	ENST00000313777.8@FUZ	ENST00000313777.8	protein_coding	49812996,49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806897	49813270,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 11.58 Transcript Type= protein_coding
chr19	49808958	49810698	49808958	49810698	+	transcript5273.chr19.nnic@NA	transcript5273.chr19.nnic	NA	49808958	49810698	Gene ID= novel_gene_chr19_5274 TPM= 2.9 Transcript Type= NA
chr19	49818271	49840384	49818271	49840384	+	transcript5276.chr19.nic@MED25	transcript5276.chr19.nic	protein_coding	49818271,49818571,49819172,49828449,49828970,49829786,49830088,49830511,49830694,49831333,49831936,49832100,49832308,49834986,49835534,49835727,49836226,49838580	49818475,49818616,49819296,49828547,49829090,49829948,49830218,49830598,49830887,49831461,49832021,49832157,49832415,49835177,49835605,49835945,49836406,49840384	Gene ID= ENSG00000104973.16 TPM= 28.8 Transcript Type= NA
chr19	49833930	49836980	49833930	49836980	+	transcript5304.chr19.nnic@MED25	transcript5304.chr19.nnic	protein_coding	49833930,49834986,49835534,49835727,49836226,49836847	49834022,49835177,49835605,49835945,49836406,49836980	Gene ID= ENSG00000104973.16 TPM= 10.94 Transcript Type= NA
chr19	49818289	49836979	49818289	49836979	+	ENST00000312865.10@MED25	ENST00000312865.10	protein_coding	49818289,49818571,49819172,49828449,49828970,49829786,49830088,49830511,49830694,49831333,49831936,49832100,49832308,49834986,49835534,49835727,49836226,49836847	49818475,49818616,49819296,49828547,49829090,49829948,49830218,49830598,49830887,49831461,49832021,49832157,49832415,49835177,49835605,49835945,49836406,49836979	Gene ID= ENSG00000104973.16 TPM= 44.24 Transcript Type= protein_coding
chr19	49848567	49851452	49848567	49851452	-	transcript5311.chr19.nnic@NA	transcript5311.chr19.nnic	NA	49848567	49851452	Gene ID= novel_gene_chr19_5312 TPM= 2.9 Transcript Type= NA
chr19	49851159	49860733	49851159	49860733	+	ENST00000391842.5@PTOV1	ENST00000391842.5	protein_coding	49851159,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268	49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860733	Gene ID= ENSG00000104960.15 TPM= 11.9 Transcript Type= protein_coding
chr19	49851191	49860744	49851191	49860744	+	ENST00000599732.5@PTOV1	ENST00000599732.5	protein_coding	49851191,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268,49860614	49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860744	Gene ID= ENSG00000104960.15 TPM= 133.94 Transcript Type= protein_coding
chr19	49851225	49860740	49851225	49860740	+	ENST00000601675.5@PTOV1	ENST00000601675.5	protein_coding	49851225,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268,49860566	49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860740	Gene ID= ENSG00000104960.15 TPM= 14 Transcript Type= protein_coding
chr19	49861204	49867886	49861204	49867886	-	ENST00000322344.7@PNKP	ENST00000322344.7	protein_coding	49867469,49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861204	49867886,49867217,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365	Gene ID= ENSG00000039650.11 TPM= 18.34 Transcript Type= protein_coding
chr19	49861231	49867286	49861231	49867286	-	ENST00000596014.5@PNKP	ENST00000596014.5	protein_coding	49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861231	49867286,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365	Gene ID= ENSG00000039650.11 TPM= 3.86 Transcript Type= protein_coding
chr19	49869039	49876619	49869039	49876619	-	transcript5326.chr19.nnic@AKT1S1	transcript5326.chr19.nnic	protein_coding	49876603,49872917,49871812,49871547,49869039	49876619,49873302,49871891,49871716,49870060	Gene ID= ENSG00000204673.10 TPM= 31.86 Transcript Type= NA
chr19	49869038	49875285	49869038	49875285	-	ENST00000391833.5@AKT1S1	ENST00000391833.5	protein_coding	49872917,49871812,49871547,49869038	49875285,49871889,49871716,49870060	Gene ID= ENSG00000204673.10 TPM= 6.76 Transcript Type= protein_coding
chr19	49876938	49878029	49876938	49878029	-	transcript5328.chr19.nnic@NA	transcript5328.chr19.nnic	NA	49876938	49878029	Gene ID= novel_gene_chr19_5329 TPM= 5.79 Transcript Type= NA
chr19	49877666	49888749	49877666	49888749	+	transcript5318.chr19.nnic@TBC1D17	transcript5318.chr19.nnic	protein_coding	49877666,49878143,49878498,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888231,49888424	49877744,49878241,49878572,49880402,49881475,49882152,49882388,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888749	Gene ID= ENSG00000104946.12 TPM= 17.86 Transcript Type= NA
chr19	49877666	49888743	49877666	49888743	+	ENST00000535102.6@TBC1D17	ENST00000535102.6	protein_coding	49877666,49878498,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888231,49888424	49877744,49878572,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888743	Gene ID= ENSG00000104946.12 TPM= 23.65 Transcript Type= protein_coding
chr19	49889654	49896955	49889654	49896955	-	ENST00000391826.6@IL4I1	ENST00000391826.6	protein_coding	49896835,49896148,49895815,49895068,49894268,49891405,49890971,49889654	49896955,49896182,49896053,49895180,49894469,49891473,49891107,49890600	Gene ID= ENSG00000104951.15 TPM= 1.93 Transcript Type= protein_coding
chr19	49906828	49929539	49906828	49929539	-	transcript5348.chr19.nnic@IL4I1	transcript5348.chr19.nnic	protein_coding	49929417,49906828	49929539,49909884	Gene ID= ENSG00000104951.15 TPM= 11 Transcript Type= NA
chr19	49907538	49929539	49907538	49929539	-	transcript5351.chr19.nnic@IL4I1	transcript5351.chr19.nnic	protein_coding	49929417,49907538	49929539,49909884	Gene ID= ENSG00000104951.15 TPM= 6.18 Transcript Type= NA
chr19	49907543	49929731	49907543	49929731	-	ENST00000352066.7@NUP62	ENST00000352066.7	protein_coding	49929326,49927694,49907543	49929731,49927815,49909884	Gene ID= ENSG00000213024.11 TPM= 5.21 Transcript Type= protein_coding
chr19	49907543	49929514	49907543	49929514	-	transcript5341.chr19.nic@NUP62	transcript5341.chr19.nic	protein_coding	49929417,49927694,49907543	49929514,49927815,49909884	Gene ID= ENSG00000213024.11 TPM= 2.32 Transcript Type= NA
chr19	49906825	49929744	49906825	49929744	-	ENST00000422090.2@NUP62	ENST00000422090.2	protein_coding	49929326,49906825	49929744,49909884	Gene ID= ENSG00000213024.11 TPM= 11.97 Transcript Type= protein_coding
chr19	49976467	50025386	49976467	50025386	-	ENST00000316763.7@VRK3	ENST00000316763.7	protein_coding	50025267,50020585,50016024,50009236,50007569,50000790,49997504,49995191,49994814,49992860,49989639,49988372,49980955,49979083,49976467	50025386,50020647,50016163,50009385,50007826,50000854,49997570,49995275,49994919,49992952,49989771,49988492,49981013,49979242,49976784	Gene ID= ENSG00000105053.10 TPM= 8.21 Transcript Type= protein_coding
chr19	49976467	50025372	49976467	50025372	-	transcript5362.chr19.nnic@VRK3	transcript5362.chr19.nnic	protein_coding	50025346,50020585,50016024,50009236,50007569,50000790,49997504,49995191,49994814,49992860,49988372,49980955,49979083,49976467	50025372,50020647,50016163,50009385,50007826,50000854,49997570,49995275,49994919,49992952,49988492,49981013,49979242,49976784	Gene ID= ENSG00000105053.10 TPM= 2.41 Transcript Type= NA
chr19	50025806	50048772	50025806	50048772	+	ENST00000391821.6@ZNF473	ENST00000391821.6	protein_coding	50025806,50031014,50039161,50041730,50044670	50026122,50031091,50039287,50041819,50048772	Gene ID= ENSG00000142528.15 TPM= 13.51 Transcript Type= protein_coding
chr19	50026005	50047167	50026005	50047167	+	ENST00000445728.7@ZNF473	ENST00000445728.7	protein_coding	50026005,50039161,50041730,50044670	50026122,50039287,50041819,50047167	Gene ID= ENSG00000142528.15 TPM= 2.9 Transcript Type= protein_coding
chr19	50203628	50310542	50203628	50310542	+	ENST00000376970.6@MYH14	ENST00000376970.6	protein_coding	50203628,50210363,50217615,50223083,50223247,50225585,50226903,50230525,50231930,50244242,50247004,50248987,50249650,50250515,50252639,50257299,50259144,50260646,50261475,50263312,50266877,50268161,50271409,50271849,50272560,50275991,50276757,50278083,50280037,50280231,50281594,50286482,50289436,50290887,50292261,50293233,50293564,50301661,50307049,50309005,50309640	50203671,50210770,50217771,50223110,50223349,50225677,50226966,50230623,50232070,50244337,50247122,50249139,50249823,50250688,50252753,50257486,50259265,50260715,50261635,50263420,50267008,50268367,50271546,50271972,50272731,50276203,50276901,50278289,50280141,50280383,50281842,50286694,50289648,50291048,50292389,50293321,50293687,50301869,50307157,50309177,50310542	Gene ID= ENSG00000105357.15 TPM= 99.26 Transcript Type= protein_coding
chr19	50203628	50310542	50203628	50310542	+	ENST00000425460.5@MYH14	ENST00000425460.5	protein_coding	50203628,50210363,50217615,50223083,50223247,50224154,50225585,50226903,50230525,50231930,50244242,50247004,50248987,50249650,50250515,50252639,50257299,50259144,50260646,50261475,50263312,50266877,50268161,50271409,50271849,50272560,50275991,50276757,50278083,50280037,50280231,50281594,50286482,50289436,50290887,50292261,50293233,50293564,50301661,50307049,50309005,50309640	50203671,50210770,50217771,50223110,50223349,50224177,50225677,50226966,50230623,50232070,50244337,50247122,50249139,50249823,50250688,50252753,50257486,50259265,50260715,50261635,50263420,50267008,50268367,50271546,50271972,50272731,50276203,50276901,50278289,50280141,50280383,50281842,50286694,50289648,50291048,50292389,50293321,50293687,50301869,50307157,50309177,50310542	Gene ID= ENSG00000105357.15 TPM= 98.3 Transcript Type= protein_coding
chr19	50203637	50271482	50203637	50271482	+	ENST00000599920.5@MYH14	ENST00000599920.5	protein_coding	50203637,50210363,50217615,50223083,50223247,50224154,50225585,50226903,50230525,50231930,50244242,50247004,50248987,50249650,50250515,50252639,50257299,50259144,50260646,50261475,50263312,50266877,50268161,50271409	50203671,50210770,50217771,50223110,50223349,50224177,50225677,50226966,50230623,50232070,50244337,50247122,50249139,50249823,50250688,50252753,50257486,50259265,50260715,50261635,50263420,50267008,50268367,50271482	Gene ID= ENSG00000105357.15 TPM= 8.04 Transcript Type= protein_coding
chr19	50329692	50382979	50329692	50382979	+	ENST00000593532.5@NR1H2	ENST00000593532.5	protein_coding	50329692,50338002,50352491,50372871,50376235,50376719,50377587,50377733,50378149,50378522,50379134,50379780,50381966,50382456	50329795,50338076,50352606,50372985,50376576,50376826,50377648,50377870,50378312,50378796,50379181,50379879,50382174,50382979	Gene ID= ENSG00000131408.13 TPM= 1.59 Transcript Type= nonsense_mediated_decay
chr19	50376403	50382982	50376403	50382982	+	transcript5395.chr19.nic@NR1H2	transcript5395.chr19.nic	protein_coding	50376403,50376719,50377587,50377733,50378149,50379002,50379780,50381966,50382456	50376576,50376826,50377648,50377870,50378796,50379181,50379879,50382174,50382982	Gene ID= ENSG00000131408.13 TPM= 11.56 Transcript Type= NA
chr19	50376469	50382982	50376469	50382982	+	ENST00000253727.9@NR1H2	ENST00000253727.9	protein_coding	50376469,50376719,50377587,50377733,50378149,50378522,50379002,50379780,50381966,50382456	50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382982	Gene ID= ENSG00000131408.13 TPM= 363.42 Transcript Type= protein_coding
chr19	50376473	50382950	50376473	50382950	+	ENST00000599105.5@NR1H2	ENST00000599105.5	protein_coding	50376473,50376719,50377587,50377733,50378149,50378522,50379134,50379780,50381966,50382456	50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382950	Gene ID= ENSG00000131408.13 TPM= 8.69 Transcript Type= protein_coding
chr19	50384339	50418014	50384339	50418014	+	ENST00000440232.6@POLD1	ENST00000440232.6	protein_coding	50384339,50398851,50399371,50401778,50401999,50402205,50402454,50402612,50403053,50403493,50406182,50406407,50406983,50407327,50408785,50409122,50409519,50413426,50413742,50414815,50415438,50415724,50416396,50416610,50417045,50417172,50417842	50384390,50399053,50399484,50401924,50402124,50402373,50402535,50402741,50403219,50403597,50406322,50406517,50407174,50407415,50408901,50409235,50409666,50413521,50413879,50414990,50415590,50415826,50416528,50416723,50417097,50417269,50418014	Gene ID= ENSG00000062822.12 TPM= 7.72 Transcript Type= protein_coding
chr19	50384351	50418014	50384351	50418014	+	ENST00000599857.5@POLD1	ENST00000599857.5	protein_coding	50384351,50398848,50399371,50401778,50401999,50402205,50402454,50402612,50403053,50403493,50406182,50406407,50406983,50407327,50408785,50409122,50409519,50413426,50413742,50414815,50415438,50415724,50416396,50416610,50417045,50417172,50417842	50384390,50399053,50399484,50401924,50402124,50402373,50402535,50402741,50403219,50403597,50406322,50406517,50407174,50407415,50408901,50409235,50409666,50413521,50413879,50414990,50415590,50415826,50416528,50416723,50417097,50417269,50418014	Gene ID= ENSG00000062822.12 TPM= 5.79 Transcript Type= protein_coding
chr19	50432903	50466321	50432903	50466321	+	ENST00000357701.5@MYBPC2	ENST00000357701.5	protein_coding	50432903,50435161,50435776,50436012,50436617,50437473,50437659,50440880,50442181,50443494,50443711,50445880,50448225,50450829,50451280,50451864,50454020,50454265,50455108,50455510,50458587,50458918,50459111,50460040,50461542,50461900,50464346,50466195	50432972,50435250,50435862,50436160,50436734,50437521,50437718,50441076,50442313,50443618,50443816,50446052,50448390,50450935,50451309,50452003,50454179,50454369,50455296,50455644,50458754,50459006,50459306,50460179,50461701,50462036,50464532,50466321	Gene ID= ENSG00000086967.9 TPM= 3703.46 Transcript Type= protein_coding
chr19	50476499	50490870	50476499	50490870	+	ENST00000334976.10@EMC10	ENST00000334976.10	protein_coding	50476499,50477929,50478957,50480111,50480581,50480884,50482149	50476658,50478001,50479066,50480215,50480762,50480977,50490870	Gene ID= ENSG00000161671.16 TPM= 10.62 Transcript Type= protein_coding
chr19	50497272	50500265	50497272	50500265	-	transcript5491.chr19.nnic@NA	transcript5491.chr19.nnic	NA	50497272	50500265	Gene ID= novel_gene_chr19_5492 TPM= 8.69 Transcript Type= NA
chr19	50505998	50511353	50505998	50511353	-	ENST00000598418.5@JOSD2	ENST00000598418.5	protein_coding	50511117,50510286,50507574,50506378,50505998	50511353,50510448,50507699,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 26.98 Transcript Type= protein_coding
chr19	50506002	50511218	50506002	50511218	-	transcript5498.chr19.nnic@JOSD2	transcript5498.chr19.nnic	protein_coding	50511075,50510286,50507574,50506378,50506002	50511218,50510448,50507699,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 3.81 Transcript Type= NA
chr19	50506002	50511221	50506002	50511221	-	transcript5503.chr19.nnic@JOSD2	transcript5503.chr19.nnic	protein_coding	50511117,50507574,50506378,50506002	50511221,50507699,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 3.33 Transcript Type= NA
chr19	50506002	50508143	50506002	50508143	-	transcript5506.chr19.nic@JOSD2	transcript5506.chr19.nic	protein_coding	50507574,50506378,50506002	50508143,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 2.37 Transcript Type= NA
chr19	50506002	50511220	50506002	50511220	-	ENST00000595669.5@JOSD2	ENST00000595669.5	protein_coding	50511117,50510286,50506378,50506002	50511220,50510448,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 5.02 Transcript Type= protein_coding
chr19	50797705	50804717	50797705	50804717	-	ENST00000391812.5@C19orf48	ENST00000391812.5	protein_coding	50804572,50802454,50802217,50799294,50797705	50804717,50802614,50802257,50799357,50798958	Gene ID= ENSG00000167747.14 TPM= 6.76 Transcript Type= protein_coding
chr19	50797704	50804929	50797704	50804929	-	ENST00000641834.1@C19orf48	ENST00000641834.1	protein_coding	50804572,50802217,50799294,50797704	50804929,50802257,50799357,50798958	Gene ID= ENSG00000167747.14 TPM= 41.51 Transcript Type= processed_transcript
chr19	51097606	51108370	51097606	51108370	-	ENST00000421832.2@CTU1	ENST00000421832.2	protein_coding	51108347,51104062,51097606	51108370,51104590,51099139	Gene ID= ENSG00000142544.6 TPM= 4.83 Transcript Type= protein_coding
chr19	51345171	51366418	51345171	51366418	-	ENST00000309244.8@ETFB	ENST00000309244.8	protein_coding	51366270,51354150,51353132,51350329,51346900,51345171	51366418,51354308,51353290,51350391,51347058,51345381	Gene ID= ENSG00000105379.9 TPM= 178.58 Transcript Type= protein_coding
chr19	51872003	51887951	51872003	51887951	-	transcript5531.chr19.nic@ZNF577	transcript5531.chr19.nic	protein_coding	51887844,51886821,51880679,51880323,51878389,51877282,51872003	51887951,51886912,51880877,51880401,51878515,51877377,51873706	Gene ID= ENSG00000161551.14 TPM= 1.93 Transcript Type= NA
chr19	51927220	51946623	51927220	51946623	+	ENST00000293471.10@ZNF613	ENST00000293471.10	protein_coding	51927220,51929732,51936028,51940209,51940617,51944119	51927540,51929896,51936235,51940335,51940709,51946623	Gene ID= ENSG00000176024.17 TPM= 1.93 Transcript Type= protein_coding
chr19	51964343	51986826	51964343	51986826	-	ENST00000243644.8@ZNF350	ENST00000243644.8	protein_coding	51986770,51974346,51969005,51968578,51964343	51986826,51974531,51969131,51968673,51966214	Gene ID= ENSG00000256683.6 TPM= 1.93 Transcript Type= protein_coding
chr19	52013325	52028570	52013325	52028570	-	ENST00000270649.10@ZNF614	ENST00000270649.10	protein_coding	52028242,52025731,52018368,52018008,52013325	52028570,52025961,52018494,52018103,52017359	Gene ID= ENSG00000142556.18 TPM= 3.86 Transcript Type= protein_coding
chr19	52048676	52050021	52048676	52050021	+	transcript5558.chr19.nnic@NA	transcript5558.chr19.nnic	NA	52048676	52050021	Gene ID= novel_gene_chr19_5559 TPM= 2.9 Transcript Type= NA
chr19	52160321	52171643	52160321	52171643	-	ENST00000597065.1@ZNF836	ENST00000597065.1	protein_coding	52171336,52169648,52168058,52160321	52171643,52169781,52168152,52160591	Gene ID= ENSG00000196267.12 TPM= 1.93 Transcript Type= protein_coding
chr19	52190012	52226417	52190012	52226417	+	transcript5565.chr19.nnic@PPP2R1A	transcript5565.chr19.nnic	protein_coding	52190012,52201944,52205963,52211260,52212686,52212955,52215779,52216004,52216529,52219691,52220189,52220979,52222099,52225717,52225965	52190174,52202034,52206063,52211492,52212833,52213110,52215862,52216074,52216663,52219864,52220249,52221133,52222241,52225808,52226417	Gene ID= ENSG00000105568.17 TPM= 46.33 Transcript Type= NA
chr19	52388284	52389369	52388284	52389369	-	transcript5592.chr19.nnic@NA	transcript5592.chr19.nnic	NA	52388284	52389369	Gene ID= novel_gene_chr19_5593 TPM= 3.86 Transcript Type= NA
chr19	52570275	52584566	52570275	52584566	+	ENST00000391785.7@ZNF701	ENST00000391785.7	protein_coding	52570275,52574077,52575895,52582202	52570330,52574162,52576021,52584566	Gene ID= ENSG00000167562.12 TPM= 2.9 Transcript Type= protein_coding
chr19	52797409	52821642	52797409	52821642	-	transcript5619.chr19.nic@ZNF28	transcript5619.chr19.nic	protein_coding	52821586,52817944,52808007,52805145,52797409	52821642,52818031,52808133,52805262,52801702	Gene ID= ENSG00000198538.10 TPM= 1.93 Transcript Type= NA
chr19	52838536	52857649	52838536	52857649	-	ENST00000243639.8@ZNF468	ENST00000243639.8	protein_coding	52857572,52854258,52849087,52845179,52838536	52857649,52854345,52849213,52845296,52842151	Gene ID= ENSG00000204604.9 TPM= 2.9 Transcript Type= protein_coding
chr19	52835764	52857620	52835764	52857620	-	transcript5625.chr19.nnic@ZNF468	transcript5625.chr19.nnic	protein_coding	52857572,52854258,52849087,52835764	52857620,52854345,52849213,52836069	Gene ID= ENSG00000204604.9 TPM= 1.93 Transcript Type= NA
chr19	52838008	52857619	52838008	52857619	-	ENST00000595646.5@ZNF468	ENST00000595646.5	protein_coding	52857572,52854258,52849087,52838008	52857619,52854345,52849213,52842151	Gene ID= ENSG00000204604.9 TPM= 1.93 Transcript Type= protein_coding
chr19	53066614	53103434	53066614	53103434	-	ENST00000418871.5@ZNF160	ENST00000418871.5	protein_coding	53103265,53091637,53086262,53075057,53074140,53066614	53103434,53091720,53086321,53075183,53074268,53070262	Gene ID= ENSG00000170949.17 TPM= 7.72 Transcript Type= protein_coding
chr19	53333749	53354869	53333749	53354869	+	ENST00000595091.6@ZNF845	ENST00000595091.6	protein_coding	53333749,53340824,53341235,53345506,53350818	53333792,53340925,53341322,53345632,53354869	Gene ID= ENSG00000213799.11 TPM= 1.93 Transcript Type= protein_coding
chr19	53395150	53412007	53395150	53412007	+	ENST00000396408.7@ZNF765	ENST00000396408.7	protein_coding	53395150,53397943,53402065,53407698	53395193,53398030,53402191,53412007	Gene ID= ENSG00000196417.12 TPM= 2.9 Transcript Type= protein_coding
chr19	53521024	53580269	53521024	53580269	+	ENST00000253144.13@ZNF331	ENST00000253144.13	protein_coding	53521024,53522617,53539216,53555845,53569304,53571604,53576697	53522084,53522684,53539282,53555908,53569385,53571730,53580269	Gene ID= ENSG00000130844.16 TPM= 4.83 Transcript Type= protein_coding
chr19	53554530	53578389	53554530	53578389	+	ENST00000512387.5@ZNF331	ENST00000512387.5	protein_coding	53554530,53555845,53569304,53571604,53576697	53554693,53555908,53569385,53571730,53578389	Gene ID= ENSG00000130844.16 TPM= 1.93 Transcript Type= protein_coding
chr19	53867883	53876437	53867883	53876437	+	ENST00000391770.8@MYADM	ENST00000391770.8	protein_coding	53867883,53869754,53873528	53867943,53869838,53876437	Gene ID= ENSG00000179820.15 TPM= 8.69 Transcript Type= protein_coding
chr19	53869406	53876435	53869406	53876435	+	ENST00000391769.2@MYADM	ENST00000391769.2	protein_coding	53869406,53869754,53873528	53869598,53869838,53876435	Gene ID= ENSG00000179820.15 TPM= 7.72 Transcript Type= protein_coding
chr19	53991605	54002616	53991605	54002616	+	transcript5672.chr19.nnic@CACNG6	transcript5672.chr19.nnic	protein_coding	53991605,53998239,53999634,54002303,54002539	53993208,53998313,53999771,54002396,54002616	Gene ID= ENSG00000130433.7 TPM= 7.56 Transcript Type= NA
chr19	53991605	54012656	53991605	54012656	+	transcript5673.chr19.nnic@CACNG6	transcript5673.chr19.nnic	protein_coding	53991605,53998239,53999634,54011785,54011951	53993208,53998313,53999771,54011820,54012656	Gene ID= ENSG00000130433.7 TPM= 13.35 Transcript Type= NA
chr19	53992288	54012669	53992288	54012669	+	ENST00000252729.6@CACNG6	ENST00000252729.6	protein_coding	53992288,53998239,53999634,54011951	53993208,53998313,53999771,54012669	Gene ID= ENSG00000130433.7 TPM= 8.04 Transcript Type= protein_coding
chr19	54102885	54106961	54102885	54106961	+	ENST00000303553.5@NDUFA3	ENST00000303553.5	protein_coding	54102885,54103114,54105934,54106811	54102959,54103188,54106011,54106961	Gene ID= ENSG00000170906.15 TPM= 34.59 Transcript Type= protein_coding
chr19	54102869	54106965	54102869	54106965	+	ENST00000391763.3@NDUFA3	ENST00000391763.3	protein_coding	54102869,54103114,54105934,54106811	54102898,54103188,54106011,54106965	Gene ID= ENSG00000170906.15 TPM= 290.39 Transcript Type= protein_coding
chr19	54102852	54106961	54102852	54106961	+	ENST00000391762.5@NDUFA3	ENST00000391762.5	protein_coding	54102852,54103114,54105934,54106353,54106811	54102888,54103188,54106011,54106446,54106961	Gene ID= ENSG00000170906.15 TPM= 9.65 Transcript Type= protein_coding
chr19	54102855	54106961	54102855	54106961	+	ENST00000451517.5@NDUFA3	ENST00000451517.5	protein_coding	54102855,54103114,54105597,54105934,54106811	54102888,54103188,54105703,54106011,54106961	Gene ID= ENSG00000170906.15 TPM= 17.69 Transcript Type= nonsense_mediated_decay
chr19	54106609	54106959	54106609	54106959	+	transcript5687.chr19.nnic@NA	transcript5687.chr19.nnic	NA	54106609	54106959	Gene ID= novel_gene_chr19_5688 TPM= 1.93 Transcript Type= NA
chr19	54107013	54115675	54107013	54115675	-	ENST00000391759.5@TFPT	ENST00000391759.5	protein_coding	54115247,54114442,54110051,54108326,54108026,54107013	54115675,54114700,54110121,54108395,54108244,54107169	Gene ID= ENSG00000105619.13 TPM= 2.9 Transcript Type= protein_coding
chr19	54115457	54131709	54115457	54131709	+	ENST00000321030.8@PRPF31	ENST00000321030.8	protein_coding	54115457,54118271,54118573,54121860,54122497,54123454,54123749,54124499,54126528,54128073,54128305,54129057,54129272,54131307	54115797,54118455,54118633,54121943,54122594,54123560,54123918,54124656,54126617,54128200,54128377,54129185,54129370,54131709	Gene ID= ENSG00000105618.13 TPM= 70.47 Transcript Type= protein_coding
chr19	54137728	54155681	54137728	54155681	+	ENST00000221232.9@CNOT3	ENST00000221232.9	protein_coding	54137728,54142929,54143119,54143442,54143660,54144006,54144237,54145598,54145910,54146601,54148148,54148620,54149560,54152226,54152428,54152867,54153715,54155309	54137993,54143003,54143186,54143516,54143749,54144134,54144332,54145817,54146043,54146657,54148535,54148743,54149758,54152325,54152626,54152999,54153840,54155681	Gene ID= ENSG00000088038.17 TPM= 5.79 Transcript Type= protein_coding
chr19	54155161	54159882	54155161	54159882	-	ENST00000222224.3@LENG1	ENST00000222224.3	protein_coding	54159564,54158282,54156763,54155161	54159882,54158461,54157025,54155940	Gene ID= ENSG00000105617.3 TPM= 17.38 Transcript Type= protein_coding
chr19	54173415	54189815	54173415	54189815	-	ENST00000245615.5@MBOAT7	ENST00000245615.5	protein_coding	54189338,54188433,54188217,54187161,54183521,54180773,54178765,54173415	54189815,54188511,54188346,54187287,54183680,54181133,54178941,54174431	Gene ID= ENSG00000125505.16 TPM= 18.34 Transcript Type= protein_coding
chr19	54190083	54193666	54190083	54193666	+	transcript5702.chr19.nic@TSEN34	transcript5702.chr19.nic	protein_coding	54190083,54191361,54191721,54192116,54193175	54190162,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 4.1 Transcript Type= NA
chr19	54190264	54193666	54190264	54193666	+	transcript5706.chr19.nic@TSEN34	transcript5706.chr19.nic	protein_coding	54190264,54191361,54191721,54192116,54193175	54190371,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 8.93 Transcript Type= NA
chr19	54190731	54193666	54190731	54193666	+	ENST00000396383.5@TSEN34	ENST00000396383.5	protein_coding	54190731,54191361,54191721,54192116,54193175	54191037,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 1.21 Transcript Type= protein_coding
chr19	54190268	54194536	54190268	54194536	+	ENST00000302937.8@TSEN34	ENST00000302937.8	protein_coding	54190268,54191361,54191721,54192116,54193175	54190450,54191607,54191964,54192373,54194536	Gene ID= ENSG00000170892.10 TPM= 5.79 Transcript Type= protein_coding
chr19	54191253	54193666	54191253	54193666	+	ENST00000396388.2@TSEN34	ENST00000396388.2	protein_coding	54191253,54191721,54192116,54193175	54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 5.07 Transcript Type= protein_coding
chr19	54200742	54207647	54200742	54207647	+	ENST00000302907.8@RPS9	ENST00000302907.8	protein_coding	54200742,54201160,54201487,54206276,54207398	54200888,54201281,54201609,54206462,54207647	Gene ID= ENSG00000170889.13 TPM= 459.97 Transcript Type= protein_coding
chr19	54200874	54207647	54200874	54207647	+	ENST00000391751.7@RPS9	ENST00000391751.7	protein_coding	54200874,54201160,54201487,54207398	54200888,54201281,54201609,54207647	Gene ID= ENSG00000170889.13 TPM= 24.13 Transcript Type= protein_coding
chr19	54201133	54207647	54201133	54207647	+	ENST00000391753.6@RPS9	ENST00000391753.6	protein_coding	54201133,54201487,54206276,54207398	54201281,54201609,54206462,54207647	Gene ID= ENSG00000170889.13 TPM= 87.36 Transcript Type= protein_coding
chr19	54201160	54207630	54201160	54207630	+	ENST00000441429.1@RPS9	ENST00000441429.1	protein_coding	54201160,54201487,54206276	54201281,54201609,54207630	Gene ID= ENSG00000170889.13 TPM= 1.93 Transcript Type= protein_coding
chr19	54236592	54241699	54236592	54241699	-	transcript5713.chr19.nic@LILRA6	transcript5713.chr19.nic	protein_coding	54241662,54240831,54240274,54239901,54238486,54236592	54241699,54241127,54240576,54239951,54239089,54237193	Gene ID= ENSG00000244482.10 TPM= 1.93 Transcript Type= NA
chr19	54307070	54313139	54307070	54313139	-	ENST00000432233.7@LILRA5	ENST00000432233.7	protein_coding	54313017,54312537,54312335,54311864,54311414,54307698,54307070	54313139,54312621,54312370,54312148,54311716,54307748,54307549	Gene ID= ENSG00000187116.13 TPM= 1.93 Transcript Type= protein_coding
chr19	54351384	54364957	54351384	54364957	-	ENST00000391742.6@LAIR1	ENST00000391742.6	protein_coding	54364771,54364295,54360916,54360022,54356928,54356491,54356356,54356230,54355954,54351384	54364957,54364330,54361209,54360072,54356966,54356619,54356398,54356267,54356006,54355414	Gene ID= ENSG00000167613.15 TPM= 1.93 Transcript Type= protein_coding
chr19	54447791	54449430	54447791	54449430	-	transcript5730.chr19.nnic@NA	transcript5730.chr19.nnic	NA	54447791	54449430	Gene ID= novel_gene_chr19_5731 TPM= 1.93 Transcript Type= NA
chr19	54448887	54462037	54448887	54462037	+	ENST00000326764.9@LENG8	ENST00000326764.9	protein_coding	54448887,54451290,54452093,54452651,54453546,54454430,54454951,54455364,54455967,54456325,54456636,54457747,54457934,54458103,54458314,54460766	54449310,54451382,54452267,54452752,54453656,54454682,54455092,54455567,54456245,54456465,54456921,54457848,54458002,54458232,54458521,54462037	Gene ID= ENSG00000167615.16 TPM= 51.16 Transcript Type= protein_coding
chr19	54465026	54473264	54465026	54473264	-	ENST00000301200.2@CDC42EP5	ENST00000301200.2	protein_coding	54473064,54471545,54465026	54473264,54471685,54465547	Gene ID= ENSG00000167617.2 TPM= 3.86 Transcript Type= protein_coding
chr19	54662995	54668397	54662995	54668397	+	ENST00000430952.6@LILRB4	ENST00000430952.6	protein_coding	54662995,54663532,54663754,54664186,54664799,54665130,54665815,54666240,54666399,54666697,54667638,54667873	54663067,54663567,54664038,54664485,54664849,54665180,54665931,54666315,54666436,54666749,54667793,54668397	Gene ID= ENSG00000186818.12 TPM= 1.93 Transcript Type= protein_coding
chr19	55044324	55063217	55044324	55063217	-	ENST00000610356.4@RDH13	ENST00000610356.4	protein_coding	55062968,55059157,55056653,55048659,55048329,55047387,55044324	55063217,55059275,55056808,55048763,55048541,55047488,55045309	Gene ID= ENSG00000160439.15 TPM= 36.68 Transcript Type= protein_coding
chr19	55090914	55095369	55090914	55095369	-	transcript5785.chr19.nic@PPP1R12C	transcript5785.chr19.nic	protein_coding	55095291,55094661,55094345,55093153,55093016,55092783,55092622,55092442,55092222,55091859,55091650,55090914	55095369,55094798,55094435,55093233,55093076,55092865,55092662,55092544,55092326,55091909,55091700,55091558	Gene ID= ENSG00000125503.12 TPM= 5.79 Transcript Type= NA
chr19	55090913	55117559	55090913	55117559	-	ENST00000263433.7@PPP1R12C	ENST00000263433.7	protein_coding	55117223,55112665,55112467,55103409,55098951,55098784,55096262,55096051,55095867,55095445,55095291,55094661,55094345,55093153,55093016,55092783,55092622,55092442,55092222,55091859,55091650,55090913	55117559,55112795,55112585,55103568,55099095,55098858,55096335,55096178,55095940,55095603,55095358,55094798,55094435,55093233,55093076,55092868,55092662,55092544,55092326,55091909,55091700,55091558	Gene ID= ENSG00000125503.12 TPM= 39.58 Transcript Type= protein_coding
chr19	55132794	55149206	55132794	55149206	-	ENST00000291901.12@TNNT1	ENST00000291901.12	protein_coding	55149161,55147126,55147008,55146681,55146434,55145544,55141857,55141186,55140883,55137961,55137103,55134066,55133887,55132794	55149206,55147168,55147021,55146707,55146466,55145565,55141920,55141302,55140960,55138074,55137212,55134156,55133927,55132960	Gene ID= ENSG00000105048.16 TPM= 5891.69 Transcript Type= protein_coding
chr19	55132794	55149206	55132794	55149206	-	ENST00000356783.9@TNNT1	ENST00000356783.9	protein_coding	55149161,55147126,55147008,55146681,55145544,55141857,55141186,55140883,55137961,55137103,55134066,55133887,55132794	55149206,55147168,55147021,55146707,55145565,55141920,55141302,55140960,55138074,55137212,55134156,55133927,55132960	Gene ID= ENSG00000105048.16 TPM= 1440.34 Transcript Type= protein_coding
chr19	55132794	55149354	55132794	55149354	-	ENST00000588981.5@TNNT1	ENST00000588981.5	protein_coding	55149161,55147126,55147008,55146681,55146434,55145544,55141857,55141186,55140883,55137961,55137103,55134066,55133887,55132794	55149354,55147168,55147021,55146707,55146466,55145565,55141920,55141302,55140960,55138074,55137212,55134204,55133927,55132960	Gene ID= ENSG00000105048.16 TPM= 45.82 Transcript Type= protein_coding
chr19	55132794	55149193	55132794	55149193	-	ENST00000587758.5@TNNT1	ENST00000587758.5	protein_coding	55149161,55147999,55147126,55147008,55146681,55145544,55141857,55141186,55140883,55137961,55137103,55134066,55133887,55132794	55149193,55148093,55147168,55147021,55146707,55145565,55141920,55141302,55140960,55138074,55137212,55134156,55133927,55132960	Gene ID= ENSG00000105048.16 TPM= 589.9 Transcript Type= protein_coding
chr19	55132865	55146942	55132865	55146942	-	ENST00000585321.6@TNNT1	ENST00000585321.6	protein_coding	55146681,55145544,55141857,55141186,55140883,55137961,55137103,55134066,55133887,55132865	55146942,55145565,55141920,55141302,55140960,55138074,55137212,55134156,55133927,55132960	Gene ID= ENSG00000105048.16 TPM= 6.66 Transcript Type= protein_coding
chr19	55132835	55146949	55132835	55146949	-	ENST00000587465.6@TNNT1	ENST00000587465.6	protein_coding	55146681,55146434,55145544,55141857,55141186,55140883,55137961,55137103,55134066,55133887,55132835	55146949,55146466,55145565,55141920,55141302,55140960,55138074,55137212,55134156,55133927,55132960	Gene ID= ENSG00000105048.16 TPM= 162.17 Transcript Type= protein_coding
chr19	55132828	55140922	55132828	55140922	-	ENST00000589745.5@TNNT1	ENST00000589745.5	protein_coding	55140883,55137961,55137103,55134066,55133887,55132828	55140922,55138074,55137212,55134156,55133927,55132960	Gene ID= ENSG00000105048.16 TPM= 610.07 Transcript Type= protein_coding
chr19	55151767	55156481	55151767	55156481	-	ENST00000585806.5@TNNI3	ENST00000585806.5	protein_coding	55156201,55154741,55154030,55151767	55156481,55154830,55154206,55151917	Gene ID= ENSG00000129991.12 TPM= 4.83 Transcript Type= retained_intron
chr19	55229780	55258978	55229780	55258978	-	transcript5838.chr19.nnic@PPP6R1	transcript5838.chr19.nnic	protein_coding	55258435,55256951,55252094,55246877,55245492,55245265,55245120,55242376,55242166,55241477,55241239,55240945,55240236,55239999,55239826,55239594,55239405,55236913,55236643,55232075,55231802,55231598,55231410,55230774,55230613,55229780	55258978,55257070,55252129,55247109,55245678,55245402,55245185,55242488,55242279,55241639,55241391,55241079,55240300,55240114,55239911,55239683,55239502,55236970,55236821,55232211,55231982,55231668,55231491,55230884,55230684,55230531	Gene ID= ENSG00000105063.18 TPM= 11.58 Transcript Type= NA
chr19	55229780	55259048	55229780	55259048	-	transcript5840.chr19.nnic@PPP6R1	transcript5840.chr19.nnic	protein_coding	55258435,55252094,55246877,55245492,55245265,55245120,55242376,55242166,55241477,55241239,55240945,55240236,55239999,55239826,55239594,55239405,55236913,55236643,55232075,55231802,55231598,55231410,55230774,55230613,55229780	55259048,55252129,55247109,55245678,55245402,55245185,55242488,55242279,55241639,55241391,55241079,55240300,55240114,55239911,55239683,55239502,55236970,55236821,55232211,55231982,55231668,55231491,55230884,55230684,55230531	Gene ID= ENSG00000105063.18 TPM= 44.4 Transcript Type= NA
chr19	55229780	55258995	55229780	55258995	-	ENST00000412770.6@PPP6R1	ENST00000412770.6	protein_coding	55258435,55246877,55245492,55245265,55245120,55242376,55242166,55241477,55241239,55240945,55240236,55239999,55239826,55239594,55239405,55236913,55236643,55232075,55231802,55231598,55231410,55230774,55230613,55229780	55258995,55247109,55245678,55245402,55245185,55242488,55242279,55241639,55241391,55241079,55240300,55240114,55239911,55239683,55239502,55236970,55236821,55232211,55231982,55231668,55231491,55230884,55230684,55230531	Gene ID= ENSG00000105063.18 TPM= 70.47 Transcript Type= protein_coding
chr19	55262353	55280251	55262353	55280251	-	transcript5852.chr19.nnic@HSPBP1	transcript5852.chr19.nnic	protein_coding	55280035,55279399,55277642,55274398,55266131,55265886,55265278,55262353	55280251,55279702,55277846,55274622,55266286,55265982,55265378,55262682	Gene ID= ENSG00000133265.10 TPM= 2.25 Transcript Type= NA
chr19	55262353	55280071	55262353	55280071	-	transcript5853.chr19.nic@HSPBP1	transcript5853.chr19.nic	protein_coding	55279930,55279399,55277642,55274398,55266131,55265886,55265278,55262353	55280071,55279702,55277846,55274622,55266286,55265982,55265389,55262682	Gene ID= ENSG00000133265.10 TPM= 2.25 Transcript Type= NA
chr19	55262231	55280360	55262231	55280360	-	ENST00000255631.9@HSPBP1	ENST00000255631.9	protein_coding	55280218,55280035,55279399,55277642,55274398,55266131,55265886,55265278,55262231	55280360,55280108,55279702,55277846,55274622,55266286,55265982,55265389,55262682	Gene ID= ENSG00000133265.10 TPM= 8.04 Transcript Type= protein_coding
chr19	55339853	55348120	55339853	55348120	+	ENST00000255613.7@KMT5C	ENST00000255613.7	protein_coding	55339853,55341794,55342215,55342742,55343680,55343978,55346213,55346500,55346956	55339957,55342046,55342380,55342851,55343843,55343997,55346349,55346687,55348120	Gene ID= ENSG00000133247.13 TPM= 1.93 Transcript Type= protein_coding
chr19	55379245	55384598	55379245	55384598	-	ENST00000444469.3@TMEM238	ENST00000444469.3	protein_coding	55383722,55379245	55384598,55379367	Gene ID= ENSG00000233493.3 TPM= 4.83 Transcript Type= protein_coding
chr19	55385345	55392085	55385345	55392085	+	ENST00000344063.6@RPL28	ENST00000344063.6	protein_coding	55385345,55386350,55386570,55387930,55388243	55385965,55386438,55386693,55388048,55392085	Gene ID= ENSG00000108107.14 TPM= 8.45 Transcript Type= protein_coding
chr19	55385932	55391803	55385932	55391803	+	ENST00000558815.5@RPL28	ENST00000558815.5	protein_coding	55385932,55386350,55386570,55387930,55391554	55385965,55386438,55386693,55388048,55391803	Gene ID= ENSG00000108107.14 TPM= 2.65 Transcript Type= protein_coding
chr19	55385943	55388343	55385943	55388343	+	ENST00000560881.5@RPL28	ENST00000560881.5	protein_coding	55385943,55386350,55386570,55388243	55385965,55386438,55388048,55388343	Gene ID= ENSG00000108107.14 TPM= 2.17 Transcript Type= retained_intron
chr19	55385961	55388373	55385961	55388373	+	ENST00000559463.5@RPL28	ENST00000559463.5	protein_coding	55385961,55386570,55387930,55388243	55386438,55386693,55388048,55388373	Gene ID= ENSG00000108107.14 TPM= 104.49 Transcript Type= protein_coding
chr19	55485004	55487568	55485004	55487568	+	ENST00000205194.4@NAT14	ENST00000205194.4	protein_coding	55485004,55485661,55486408	55485258,55485780,55487568	Gene ID= ENSG00000090971.4 TPM= 1.93 Transcript Type= protein_coding
chr19	55539139	55546749	55539139	55546749	-	transcript5887.chr19.nnic@SBK3	transcript5887.chr19.nnic	protein_coding	55546476,55544799,55544100,55539139	55546749,55544949,55544302,55541526	Gene ID= ENSG00000231274.5 TPM= 39.1 Transcript Type= NA
chr19	55539139	55547305	55539139	55547305	-	transcript5888.chr19.nnic@SBK3	transcript5888.chr19.nnic	protein_coding	55547263,55544799,55544100,55539139	55547305,55544949,55544302,55541526	Gene ID= ENSG00000231274.5 TPM= 40.06 Transcript Type= NA
chr19	55577525	55580853	55577525	55580853	-	transcript5894.chr19.nnic@ZNF579	transcript5894.chr19.nnic	protein_coding	55580795,55577525	55580853,55580142	Gene ID= ENSG00000218891.4 TPM= 3.86 Transcript Type= NA
chr19	55576770	55580821	55576770	55580821	-	ENST00000325421.6@ZNF579	ENST00000325421.6	protein_coding	55580795,55576770	55580821,55579641	Gene ID= ENSG00000218891.4 TPM= 10.62 Transcript Type= protein_coding
chr19	55591376	55599503	55591376	55599503	-	transcript5899.chr19.nic@FIZ1	transcript5899.chr19.nic	protein_coding	55599474,55597572,55595620,55591376	55599503,55597901,55595734,55593646	Gene ID= ENSG00000179943.7 TPM= 1.93 Transcript Type= NA
chr19	55591371	55599527	55591371	55599527	-	ENST00000221665.4@FIZ1	ENST00000221665.4	protein_coding	55599474,55597572,55591371	55599527,55597901,55593646	Gene ID= ENSG00000179943.7 TPM= 25.1 Transcript Type= protein_coding
chr19	55601879	55603138	55601879	55603138	+	ENST00000591046.1@ZNF524	ENST00000591046.1	protein_coding	55601879	55603138	Gene ID= ENSG00000171443.6 TPM= 12.07 Transcript Type= protein_coding
chr19	55600369	55603136	55600369	55603136	+	ENST00000301073.3@ZNF524	ENST00000301073.3	protein_coding	55600369,55602075	55600408,55603136	Gene ID= ENSG00000171443.6 TPM= 58.4 Transcript Type= protein_coding
chr19	55600265	55603173	55600265	55603173	+	transcript5911.chr19.nnic@NA	transcript5911.chr19.nnic	NA	55600265	55603173	Gene ID= novel_gene_chr19_5912 TPM= 4.83 Transcript Type= NA
chr19	55620742	55624601	55620742	55624601	-	ENST00000325351.4@ZNF784	ENST00000325351.4	protein_coding	55624484,55620742	55624601,55622644	Gene ID= ENSG00000179922.5 TPM= 42.47 Transcript Type= protein_coding
chr19	55640896	55643469	55640896	55643469	+	ENST00000325333.9@ZNF580	ENST00000325333.9	protein_coding	55640896,55642497	55641183,55643469	Gene ID= ENSG00000213015.8 TPM= 24.13 Transcript Type= protein_coding
chr19	55643798	55645622	55643798	55645622	+	transcript5925.chr19.nnic@ZNF581	transcript5925.chr19.nnic	protein_coding	55643798,55644553	55644026,55645622	Gene ID= ENSG00000171425.9 TPM= 3.21 Transcript Type= NA
chr19	55643547	55645622	55643547	55645622	+	ENST00000270451.5@ZNF581	ENST00000270451.5	protein_coding	55643547,55644553	55643774,55645622	Gene ID= ENSG00000171425.9 TPM= 21.56 Transcript Type= protein_coding
chr19	55643810	55645621	55643810	55645621	+	ENST00000588537.1@ZNF581	ENST00000588537.1	protein_coding	55643810,55644553	55643840,55645621	Gene ID= ENSG00000171425.9 TPM= 2.25 Transcript Type= protein_coding
chr19	55648233	55653161	55648233	55653161	+	ENST00000588740.5@CCDC106	ENST00000588740.5	protein_coding	55648233,55648946,55649205,55649408,55651283,55652430	55648277,55649077,55649309,55649584,55651495,55653161	Gene ID= ENSG00000173581.7 TPM= 3.7 Transcript Type= protein_coding
chr19	55648143	55653161	55648143	55653161	+	ENST00000586790.5@CCDC106	ENST00000586790.5	protein_coding	55648143,55649205,55649408,55651283,55652430	55649077,55649309,55649584,55651495,55653161	Gene ID= ENSG00000173581.7 TPM= 4.18 Transcript Type= protein_coding
chr19	55648035	55653161	55648035	55653161	+	ENST00000308964.7@CCDC106	ENST00000308964.7	protein_coding	55648035,55649002,55649205,55649408,55651283,55652430	55648277,55649077,55649309,55649584,55651495,55653161	Gene ID= ENSG00000173581.7 TPM= 9.49 Transcript Type= protein_coding
chr19	55655039	55674714	55655039	55674714	+	transcript5915.chr19.nnic@U2AF2	transcript5915.chr19.nnic	protein_coding	55655039,55659210,55660177,55660516,55661038,55662502,55663606,55668507,55668670,55669083,55669444,55673934,55674637	55655153,55659345,55660221,55660619,55661189,55662618,55663744,55668586,55668792,55669169,55669692,55673964,55674714	Gene ID= ENSG00000063244.12 TPM= 1.93 Transcript Type= NA
chr19	55654146	55674715	55654146	55674715	+	ENST00000450554.6@U2AF2	ENST00000450554.6	protein_coding	55654146,55659210,55660177,55660516,55661038,55662502,55663606,55668507,55668670,55669083,55669444,55673934	55655153,55659345,55660221,55660619,55661189,55662618,55663744,55668586,55668792,55669169,55669692,55674715	Gene ID= ENSG00000063244.12 TPM= 6.76 Transcript Type= protein_coding
chr19	55675204	55695766	55675204	55695766	+	transcript5933.chr19.nic@EPN1	transcript5933.chr19.nic	protein_coding	55675204,55678527,55685396,55688870,55689297,55689867,55691754,55692686,55692954,55694726,55695148	55675435,55678855,55685645,55688994,55689371,55689950,55692057,55692796,55693037,55694983,55695766	Gene ID= ENSG00000063245.14 TPM= 31.21 Transcript Type= NA
chr19	55675204	55695766	55675204	55695766	+	transcript5940.chr19.nic@EPN1	transcript5940.chr19.nic	protein_coding	55675204,55678527,55685396,55688870,55689867,55691754,55692686,55692951,55694726,55695148	55675435,55678855,55685645,55688994,55689950,55692057,55692796,55693037,55694983,55695766	Gene ID= ENSG00000063245.14 TPM= 12.07 Transcript Type= NA
chr19	55675204	55679029	55675204	55679029	+	transcript5945.chr19.nic@EPN1	transcript5945.chr19.nic	protein_coding	55675204,55678527	55675435,55679029	Gene ID= ENSG00000063245.14 TPM= 3.86 Transcript Type= NA
chr19	55675245	55695766	55675245	55695766	+	ENST00000085079.11@EPN1	ENST00000085079.11	protein_coding	55675245,55678527,55685396,55688870,55689867,55691754,55692686,55692954,55694726,55695148	55675435,55678855,55685645,55688994,55689950,55692057,55692796,55693037,55694983,55695766	Gene ID= ENSG00000063245.14 TPM= 86.23 Transcript Type= protein_coding
chr19	56087366	56121309	56087366	56121309	-	transcript5947.chr19.nnic@ZNF787	transcript5947.chr19.nnic	protein_coding	56121172,56103139,56088086,56087366	56121309,56103227,56089092,56087973	Gene ID= ENSG00000142409.5 TPM= 8.69 Transcript Type= NA
chr19	56087366	56121280	56087366	56121280	-	ENST00000610935.1@ZNF787	ENST00000610935.1	protein_coding	56121172,56103139,56087366	56121280,56103227,56089092	Gene ID= ENSG00000142409.5 TPM= 78.19 Transcript Type= protein_coding
chr19	56221312	56314875	56221312	56314875	-	transcript5957.chr19.nic@ZSCAN5A	transcript5957.chr19.nic	protein_coding	56314681,56313283,56224663,56223631,56222591,56221312	56314875,56313384,56225048,56223834,56222741,56222326	Gene ID= ENSG00000131848.9 TPM= 1.93 Transcript Type= NA
chr19	56280602	56314793	56280602	56314793	-	ENST00000585670.5@ZSCAN5A	ENST00000585670.5	protein_coding	56314681,56313283,56280602	56314793,56313384,56280700	Gene ID= ENSG00000131848.9 TPM= 1.93 Transcript Type= processed_transcript
chr19	56368321	56379828	56368321	56379828	+	ENST00000495307.5@ZNF542P	ENST00000495307.5	transcribed_unprocessed_pseudogene	56368321,56368866,56373157,56373531,56376867	56368460,56368936,56373283,56373623,56379828	Gene ID= ENSG00000240225.10 TPM= 2.9 Transcript Type= processed_transcript
chr19	56478131	56495432	56478131	56495432	+	ENST00000585445.1@ZNF667-AS1	ENST00000585445.1	lincRNA	56478131,56494163	56478381,56495432	Gene ID= ENSG00000166770.10 TPM= 2.9 Transcript Type= lincRNA
chr19	56538948	56556810	56538948	56556810	+	ENST00000301318.7@ZFP28	ENST00000301318.7	protein_coding	56538948,56539625,56547508,56547807,56548958,56550067,56550510,56553684	56539226,56539716,56547634,56547902,56549121,56550181,56550605,56556810	Gene ID= ENSG00000196867.7 TPM= 1.93 Transcript Type= protein_coding
chr19	57258439	57259329	57258439	57259329	-	transcript6024.chr19.nnic@NA	transcript6024.chr19.nnic	NA	57258439	57259329	Gene ID= novel_gene_chr19_6025 TPM= 3.86 Transcript Type= NA
chr19	57299923	57304059	57299923	57304059	-	transcript6026.chr19.nnic@NA	transcript6026.chr19.nnic	NA	57299923	57304059	Gene ID= novel_gene_chr19_6027 TPM= 1.93 Transcript Type= NA
chr19	57302118	57305056	57302118	57305056	+	transcript6020.chr19.nnic@NA	transcript6020.chr19.nnic	NA	57302118	57305056	Gene ID= novel_gene_chr19_6021 TPM= 3.86 Transcript Type= NA
chr19	57304305	57308562	57304305	57308562	+	ENST00000593427.1@AC005261.2	ENST00000593427.1	lincRNA	57304305	57308562	Gene ID= ENSG00000268205.1 TPM= 2.9 Transcript Type= lincRNA
chr19	57320509	57330776	57320509	57330776	+	ENST00000321545.4@ZNF543	ENST00000321545.4	protein_coding	57320509,57323682,57326633,57327704	57320871,57323808,57326728,57330776	Gene ID= ENSG00000178229.7 TPM= 2.9 Transcript Type= protein_coding
chr19	57351302	57359895	57351302	57359895	+	transcript6034.chr19.nnic@ZNF304	transcript6034.chr19.nnic	protein_coding	57351302,57353725,57356490	57351697,57353851,57359895	Gene ID= ENSG00000131845.14 TPM= 5.79 Transcript Type= NA
chr19	57363511	57365353	57363511	57365353	+	ENST00000543226.1@AC003002.1	ENST00000543226.1	protein_coding	57363511,57364815	57363703,57365353	Gene ID= ENSG00000256060.2 TPM= 22.2 Transcript Type= protein_coding
chr19	57411164	57421939	57411164	57421939	+	ENST00000307658.11@ZNF17	ENST00000307658.11	protein_coding	57411164,57413596,57417912,57419635	57411406,57413636,57418038,57421939	Gene ID= ENSG00000186272.12 TPM= 1.93 Transcript Type= protein_coding
chr19	57435347	57438457	57435347	57438457	+	ENST00000597296.1@ZNF749	ENST00000597296.1	protein_coding	57435347,57438102	57435667,57438457	Gene ID= ENSG00000186230.6 TPM= 4.83 Transcript Type= processed_transcript
chr19	57487711	57494672	57487711	57494672	+	ENST00000426954.6@ZNF419	ENST00000426954.6	protein_coding	57487711,57491468,57492113,57492856	57487983,57491597,57492211,57494672	Gene ID= ENSG00000105136.20 TPM= 1.93 Transcript Type= protein_coding
chr19	57487719	57494669	57487719	57494669	+	transcript6071.chr19.nnic@ZNF419	transcript6071.chr19.nnic	protein_coding	57487719,57491471,57492113,57494368	57487983,57491597,57492211,57494669	Gene ID= ENSG00000105136.20 TPM= 8.69 Transcript Type= NA
chr19	57527393	57540876	57527393	57540876	+	ENST00000376233.7@ZNF549	ENST00000376233.7	protein_coding	57527393,57531070,57535144,57537204	57527606,57531108,57535270,57540876	Gene ID= ENSG00000121406.8 TPM= 4.83 Transcript Type= protein_coding
chr19	57541836	57559863	57541836	57559863	-	ENST00000457177.5@ZNF550	ENST00000457177.5	protein_coding	57559656,57556231,57552627,57546457,57541836	57559863,57556357,57552722,57547993,57543243	Gene ID= ENSG00000251369.8 TPM= 1.93 Transcript Type= protein_coding
chr19	57541836	57559865	57541836	57559865	-	transcript6085.chr19.nnic@ZNF550	transcript6085.chr19.nnic	protein_coding	57559656,57556231,57552627,57541836	57559865,57556357,57552722,57543243	Gene ID= ENSG00000251369.8 TPM= 2.9 Transcript Type= NA
chr19	57571566	57578927	57571566	57578927	-	ENST00000196489.3@ZNF416	ENST00000196489.3	protein_coding	57578672,57578057,57575804,57571566	57578927,57578098,57575930,57573701	Gene ID= ENSG00000083817.8 TPM= 6.76 Transcript Type= protein_coding
chr19	57571568	57578910	57571568	57578910	-	transcript6088.chr19.nnic@ZNF416	transcript6088.chr19.nnic	protein_coding	57578672,57578057,57571568	57578910,57578098,57573701	Gene ID= ENSG00000083817.8 TPM= 1.93 Transcript Type= NA
chr19	57614251	57624723	57614251	57624723	+	ENST00000396161.9@ZNF134	ENST00000396161.9	protein_coding	57614251,57619412,57620160	57614503,57619508,57624723	Gene ID= ENSG00000213762.11 TPM= 1.93 Transcript Type= protein_coding
chr19	57719751	57727624	57719751	57727624	-	ENST00000317398.10@ZNF671	ENST00000317398.10	protein_coding	57727391,57723214,57722316,57719751	57727624,57723340,57722438,57721697	Gene ID= ENSG00000083814.13 TPM= 21.72 Transcript Type= protein_coding
chr19	57719751	57727613	57719751	57727613	-	ENST00000600125.5@ZNF671	ENST00000600125.5	protein_coding	57726908,57723214,57722316,57719751	57727613,57723340,57722438,57721697	Gene ID= ENSG00000083814.13 TPM= 4.34 Transcript Type= nonsense_mediated_decay
chr19	57746796	57758159	57746796	57758159	+	ENST00000317178.9@ZNF776	ENST00000317178.9	protein_coding	57746796,57750785,57753291	57747091,57750911,57758159	Gene ID= ENSG00000152443.12 TPM= 7.72 Transcript Type= protein_coding
chr19	57746818	57758159	57746818	57758159	+	transcript6125.chr19.nic@ZNF776	transcript6125.chr19.nic	protein_coding	57746818,57750785,57756872	57747091,57750911,57758159	Gene ID= ENSG00000152443.12 TPM= 1.93 Transcript Type= NA
chr19	57769670	57780577	57769670	57780577	+	ENST00000396154.6@ZNF586	ENST00000396154.6	protein_coding	57769670,57776543,57778751	57769878,57776669,57780577	Gene ID= ENSG00000083828.15 TPM= 9.65 Transcript Type= protein_coding
chr19	57807082	57814913	57807082	57814913	-	ENST00000391701.1@ZNF552	ENST00000391701.1	protein_coding	57814711,57813294,57807082	57814913,57813420,57809103	Gene ID= ENSG00000178935.5 TPM= 1.93 Transcript Type= protein_coding
chr19	57940833	57947671	57940833	57947671	-	ENST00000282308.3@ZNF256	ENST00000282308.3	protein_coding	57947442,57943934,57940833	57947671,57944060,57942647	Gene ID= ENSG00000152454.3 TPM= 2.9 Transcript Type= protein_coding
chr19	58083838	58098258	58083838	58098258	-	transcript6159.chr19.nic@ZSCAN18	transcript6159.chr19.nic	protein_coding	58098174,58089865,58088688,58087316,58086906,58086174,58083838	58098258,58090386,58088837,58087404,58087008,58086266,58085376	Gene ID= ENSG00000121413.12 TPM= 14.48 Transcript Type= NA
chr19	58087637	58098204	58087637	58098204	-	transcript6162.chr19.nic@ZSCAN18	transcript6162.chr19.nic	protein_coding	58098174,58089865,58087637	58098204,58090386,58088837	Gene ID= ENSG00000121413.12 TPM= 1.93 Transcript Type= NA
chr19	58152854	58155075	58152854	58155075	-	transcript6163.chr19.nnic@NA	transcript6163.chr19.nnic	NA	58152854	58155075	Gene ID= novel_gene_chr19_6164 TPM= 1.93 Transcript Type= NA
chr19	58183407	58213562	58183407	58213562	+	transcript6169.chr19.nic@ZNF274	transcript6169.chr19.nic	protein_coding	58183407,58185712,58186947,58206720,58209961,58211560,58212161	58183998,58185838,58187042,58207202,58210073,58211686,58213562	Gene ID= ENSG00000171606.17 TPM= 11.58 Transcript Type= NA
chr19	58278951	58302805	58278951	58302805	+	ENST00000621650.1@ZNF8	ENST00000621650.1	protein_coding	58278951,58285717,58286110,58294098	58279147,58285843,58286205,58302805	Gene ID= ENSG00000278129.1 TPM= 3.86 Transcript Type= protein_coding
chr19	58305319	58315663	58305319	58315663	+	ENST00000413518.5@AC020915.1	ENST00000413518.5	protein_coding	58305319,58306088,58312166,58314748	58305445,58306216,58312462,58315663	Gene ID= ENSG00000142396.10 TPM= 27.03 Transcript Type= protein_coding
chr19	58305374	58315202	58305374	58315202	+	ENST00000427361.5@AC020915.1	ENST00000427361.5	protein_coding	58305374,58306088,58312197,58314748	58305445,58306216,58312462,58315202	Gene ID= ENSG00000142396.10 TPM= 6.76 Transcript Type= protein_coding
chr19	58314788	58327248	58314788	58327248	-	transcript6183.chr19.nic@AC010642.2	transcript6183.chr19.nic	antisense_RNA	58326823,58325275,58314788	58327248,58325361,58315036	Gene ID= ENSG00000283103.1 TPM= 11.58 Transcript Type= NA
chr19	58327019	58342332	58327019	58342332	+	ENST00000329665.4@ZSCAN22	ENST00000329665.4	protein_coding	58327019,58334752,58338254	58327114,58335205,58342332	Gene ID= ENSG00000182318.5 TPM= 2.9 Transcript Type= protein_coding
chr19	58346860	58347657	58346860	58347657	-	ENST00000598345.1@A1BG	ENST00000598345.1	protein_coding	58347353,58346860	58347657,58347029	Gene ID= ENSG00000121410.11 TPM= 3.86 Transcript Type= retained_intron
chr19	58380407	58381229	58380407	58381229	-	transcript6197.chr19.nnic@NA	transcript6197.chr19.nnic	NA	58380407	58381229	Gene ID= novel_gene_chr19_6198 TPM= 2.9 Transcript Type= NA
chr19	58386400	58394806	58386400	58394806	+	ENST00000601521.5@RPS5	ENST00000601521.5	protein_coding	58386400,58387032,58388137,58392976,58393359,58394497,58394682	58386622,58387339,58388245,58393185,58393487,58394595,58394806	Gene ID= ENSG00000083845.8 TPM= 483.14 Transcript Type= protein_coding
chr19	58387269	58394803	58387269	58394803	+	ENST00000196551.7@RPS5	ENST00000196551.7	protein_coding	58387269,58388137,58392976,58393359,58394497,58394682	58387339,58388245,58393185,58393487,58394595,58394803	Gene ID= ENSG00000083845.8 TPM= 442.6 Transcript Type= protein_coding
chr19	58387264	58394804	58387264	58394804	+	ENST00000598098.5@RPS5	ENST00000598098.5	protein_coding	58387264,58388137,58393359,58394497,58394682	58387339,58388245,58393487,58394595,58394804	Gene ID= ENSG00000083845.8 TPM= 11.27 Transcript Type= protein_coding
chr19	58408650	58418327	58408650	58418327	+	transcript6203.chr19.nnic@ZNF584	transcript6203.chr19.nnic	protein_coding	58408650,58410006,58415524,58415882,58416811	58409165,58410091,58415646,58415940,58418327	Gene ID= ENSG00000171574.17 TPM= 2.65 Transcript Type= NA
chr19	58408625	58418327	58408625	58418327	+	ENST00000306910.8@ZNF584	ENST00000306910.8	protein_coding	58408625,58409941,58415524,58416811	58409165,58410091,58415646,58418327	Gene ID= ENSG00000171574.17 TPM= 7.48 Transcript Type= protein_coding
chr19	58408639	58418327	58408639	58418327	+	transcript6214.chr19.nic@ZNF584	transcript6214.chr19.nic	protein_coding	58408639,58415524,58416811	58409165,58415646,58418327	Gene ID= ENSG00000171574.17 TPM= 6.52 Transcript Type= NA
chr19	58408688	58418310	58408688	58418310	+	ENST00000593920.5@ZNF584	ENST00000593920.5	protein_coding	58408688,58410006,58415524,58416811	58409165,58410091,58415646,58418310	Gene ID= ENSG00000171574.17 TPM= 1.69 Transcript Type= protein_coding
chr19	58406389	58408502	58406389	58408502	-	transcript6221.chr19.nnic@NA	transcript6221.chr19.nnic	NA	58406389	58408502	Gene ID= novel_gene_chr19_6222 TPM= 2.9 Transcript Type= NA
chr19	58432814	58440222	58432814	58440222	-	ENST00000254166.3@ZNF132	ENST00000254166.3	protein_coding	58439759,58437047,58432814	58440222,58437215,58435211	Gene ID= ENSG00000131849.11 TPM= 7.72 Transcript Type= protein_coding
chr19	58451604	58457833	58451604	58457833	+	ENST00000336614.8@ZNF324B	ENST00000336614.8	protein_coding	58451604,58453696,58454228,58455183	58451704,58453822,58454344,58457833	Gene ID= ENSG00000249471.7 TPM= 8.69 Transcript Type= protein_coding
chr19	58459112	58460427	58459112	58460427	-	transcript6219.chr19.nnic@NA	transcript6219.chr19.nnic	NA	58459112	58460427	Gene ID= novel_gene_chr19_6220 TPM= 5.79 Transcript Type= NA
chr19	58467096	58473398	58467096	58473398	+	ENST00000196482.3@ZNF324	ENST00000196482.3	protein_coding	58467096,58469180,58469728,58470731	58467183,58469306,58469844,58473398	Gene ID= ENSG00000083812.11 TPM= 26.06 Transcript Type= protein_coding
chr19	58475917	58481230	58475917	58481230	+	transcript6226.chr19.nic@ZNF446	transcript6226.chr19.nic	protein_coding	58475917,58477179,58477637,58478087,58479643,58479930,58480176	58476196,58477560,58477826,58478181,58479727,58480019,58481230	Gene ID= ENSG00000083838.15 TPM= 20.03 Transcript Type= NA
chr19	58476164	58481230	58476164	58481230	+	ENST00000594369.5@ZNF446	ENST00000594369.5	protein_coding	58476164,58477179,58477637,58478087,58479643,58479930,58480176	58476504,58477560,58477826,58478181,58479727,58480019,58481230	Gene ID= ENSG00000083838.15 TPM= 5.55 Transcript Type= protein_coding
chr19	58475917	58481230	58475917	58481230	+	transcript6230.chr19.nic@ZNF446	transcript6230.chr19.nic	protein_coding	58475917,58477179,58477637,58478087,58479643,58480176	58476196,58477560,58477826,58478181,58480019,58481230	Gene ID= ENSG00000083838.15 TPM= 5.55 Transcript Type= NA
chr19	58476127	58481228	58476127	58481228	+	transcript6233.chr19.nic@ZNF446	transcript6233.chr19.nic	protein_coding	58476127,58477179,58477637,58478087,58479930	58476196,58477560,58477826,58478181,58481228	Gene ID= ENSG00000083838.15 TPM= 3.62 Transcript Type= NA
chr19	58498333	58499275	58498333	58499275	-	ENST00000594786.1@SLC27A5	ENST00000594786.1	protein_coding	58499123,58498785,58498333	58499275,58498915,58498691	Gene ID= ENSG00000083807.9 TPM= 1.93 Transcript Type= protein_coding
chr19	58513530	58520222	58513530	58520222	-	ENST00000594051.5@ZBTB45	ENST00000594051.5	protein_coding	58519742,58516395,58513530	58520222,58517673,58514310	Gene ID= ENSG00000119574.12 TPM= 10.62 Transcript Type= protein_coding
chr19	58544469	58550716	58544469	58550716	+	ENST00000253024.9@TRIM28	ENST00000253024.9	protein_coding	58544469,58545425,58545764,58547376,58547597,58547792,58548034,58548294,58548486,58548740,58548862,58548988,58549331,58549737,58549949,58550147,58550377	58545097,58545537,58545896,58547511,58547713,58547906,58548180,58548408,58548592,58548776,58548910,58549240,58549650,58549860,58550035,58550284,58550716	Gene ID= ENSG00000130726.11 TPM= 243.26 Transcript Type= protein_coding
chr19	58544473	58550715	58544473	58550715	+	ENST00000341753.10@TRIM28	ENST00000341753.10	protein_coding	58544473,58547376,58547597,58547792,58548034,58548294,58548486,58548740,58548862,58548988,58549331,58549737,58549949,58550147,58550377	58545097,58547511,58547713,58547906,58548180,58548408,58548592,58548776,58548910,58549240,58549650,58549860,58550035,58550284,58550715	Gene ID= ENSG00000130726.11 TPM= 15.44 Transcript Type= protein_coding
chr19	58551566	58555124	58551566	58555124	-	ENST00000312547.6@CHMP2A	ENST00000312547.6	protein_coding	58554988,58554045,58552259,58552055,58551906,58551566	58555124,58554236,58552438,58552185,58551967,58551776	Gene ID= ENSG00000130724.8 TPM= 65.16 Transcript Type= protein_coding
chr19	58551566	58554973	58551566	58554973	-	ENST00000601220.5@CHMP2A	ENST00000601220.5	protein_coding	58554865,58554045,58552259,58552055,58551906,58551566	58554973,58554236,58552438,58552185,58551967,58551776	Gene ID= ENSG00000130724.8 TPM= 40.06 Transcript Type= protein_coding
chr19	58555712	58558960	58555712	58558960	-	ENST00000253023.7@UBE2M	ENST00000253023.7	protein_coding	58558273,58557063,58556892,58556687,58556316,58555712	58558960,58557157,58556930,58556790,58556379,58556229	Gene ID= ENSG00000130725.7 TPM= 194.99 Transcript Type= protein_coding
chr19	58558698	58559427	58558698	58559427	+	transcript6276.chr19.nnic@NA	transcript6276.chr19.nnic	NA	58558698	58559427	Gene ID= novel_gene_chr19_6277 TPM= 1.93 Transcript Type= NA
chr19	58561933	58573575	58561933	58573575	-	ENST00000215057.6@MZF1	ENST00000215057.6	protein_coding	58573055,58570994,58570344,58569516,58569277,58561933	58573575,58571429,58570527,58569586,58569397,58563504	Gene ID= ENSG00000099326.8 TPM= 6.27 Transcript Type= protein_coding
chr19	58561933	58573575	58561933	58573575	-	ENST00000599369.5@MZF1	ENST00000599369.5	protein_coding	58573373,58570994,58570344,58569516,58569277,58561933	58573575,58571429,58570527,58569586,58569397,58563504	Gene ID= ENSG00000099326.8 TPM= 7.24 Transcript Type= protein_coding
chr19	58575460	58584397	58575460	58584397	+	ENST00000493504.1@CENPBD1P1	ENST00000493504.1	transcribed_processed_pseudogene	58575460,58581245	58575588,58584397	Gene ID= ENSG00000213753.10 TPM= 14.48 Transcript Type= processed_transcript
chr19	58601254	58605166	58601254	58605166	+	transcript6285.chr19.nnic@NA	transcript6285.chr19.nnic	NA	58601254	58605166	Gene ID= novel_gene_chr19_6286 TPM= 1.93 Transcript Type= NA
chr20	296968	300321	296968	300321	+	ENST00000500893.3@ZCCHC3	ENST00000500893.3	protein_coding	296968	300321	Gene ID= ENSG00000247315.3 TPM= 43.44 Transcript Type= protein_coding
chr20	380617	397559	380617	397559	+	ENST00000217233.7@TRIB3	ENST00000217233.7	protein_coding	380617,388011,391287,396198	381169,388301,391579,397559	Gene ID= ENSG00000101255.10 TPM= 7.72 Transcript Type= protein_coding
chr20	408034	430966	408034	430966	+	transcript5.chr20.nnic@RBCK1	transcript5.chr20.nnic	protein_coding	408034,409881,417526,417732,419347,419558,420871,422127,427313,428491,428963,430350	408779,410025,417619,417930,419468,419731,421031,422238,427492,428589,429094,430966	Gene ID= ENSG00000125826.20 TPM= 5.21 Transcript Type= NA
chr20	408062	430966	408062	430966	+	transcript6.chr20.nic@RBCK1	transcript6.chr20.nic	protein_coding	408062,409830,417526,417732,419347,419558,420871,422127,427313,428491,428951,430350	408779,410025,417619,417930,419468,419731,421031,422238,427492,428589,429094,430966	Gene ID= ENSG00000125826.20 TPM= 12.45 Transcript Type= NA
chr20	408171	430966	408171	430966	+	ENST00000353660.7@RBCK1	ENST00000353660.7	protein_coding	408171,417526,417732,419347,419558,420871,422127,427313,428491,428951,430350	408779,417619,417930,419468,419731,421031,422238,427492,428589,429094,430966	Gene ID= ENSG00000125826.20 TPM= 7.63 Transcript Type= protein_coding
chr20	408053	430966	408053	430966	+	ENST00000356286.9@RBCK1	ENST00000356286.9	protein_coding	408053,409881,417526,417732,419347,419558,420871,422127,427313,428491,428951,430350	408779,410025,417619,417930,419468,419731,421031,422238,427492,428589,429094,430966	Gene ID= ENSG00000125826.20 TPM= 68.44 Transcript Type= protein_coding
chr20	408078	410764	408078	410764	+	ENST00000475269.5@RBCK1	ENST00000475269.5	protein_coding	408078,409881,410412	408779,410025,410764	Gene ID= ENSG00000125826.20 TPM= 18.82 Transcript Type= protein_coding
chr20	408305	410764	408305	410764	+	ENST00000400245.3@RBCK1	ENST00000400245.3	protein_coding	408305,409830,410412	408779,410025,410764	Gene ID= ENSG00000125826.20 TPM= 4.34 Transcript Type= processed_transcript
chr20	422154	430966	422154	430966	+	ENST00000468272.1@RBCK1	ENST00000468272.1	protein_coding	422154,427313,428491,430350	422238,427492,429094,430966	Gene ID= ENSG00000125826.20 TPM= 3.86 Transcript Type= retained_intron
chr20	435480	462572	435480	462572	-	transcript21.chr20.nic@TBC1D20	transcript21.chr20.nic	protein_coding	462336,447889,445050,441857,441588,440248,439108,438550,435480	462572,448074,445130,442043,441689,440389,439295,438841,437598	Gene ID= ENSG00000125875.13 TPM= 5.79 Transcript Type= NA
chr20	438485	462572	438485	462572	-	transcript29.chr20.nnic@TBC1D20	transcript29.chr20.nnic	protein_coding	462336,447889,445050,441857,441588,440248,439108,438485	462572,448074,445130,442043,441689,440389,439220,438841	Gene ID= ENSG00000125875.13 TPM= 1.93 Transcript Type= NA
chr20	438485	462549	438485	462549	-	transcript32.chr20.nnic@TBC1D20	transcript32.chr20.nnic	protein_coding	462336,445050,441857,441588,440248,439108,438485	462549,445130,442043,441689,440389,439295,438841	Gene ID= ENSG00000125875.13 TPM= 2.9 Transcript Type= NA
chr20	444548	462572	444548	462572	-	transcript33.chr20.nic@TBC1D20	transcript33.chr20.nic	protein_coding	462336,447889,444548	462572,448074,445130	Gene ID= ENSG00000125875.13 TPM= 10.62 Transcript Type= NA
chr20	435480	462531	435480	462531	-	ENST00000461304.5@TBC1D20	ENST00000461304.5	protein_coding	462336,447889,445050,441857,441588,440248,439108,438550,437440,435480	462531,448074,445130,442043,441689,440389,439295,438841,437598,435970	Gene ID= ENSG00000125875.13 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr20	435480	462553	435480	462553	-	ENST00000354200.4@TBC1D20	ENST00000354200.4	protein_coding	462336,447889,445050,441857,441588,440248,439108,435480	462553,448074,445130,442043,441689,440389,439295,438841	Gene ID= ENSG00000125875.13 TPM= 11.58 Transcript Type= protein_coding
chr20	481097	543821	481097	543821	-	ENST00000217244.7@CSNK2A1	ENST00000217244.7	protein_coding	543672,527933,508451,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,481097	543821,528049,508660,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076	Gene ID= ENSG00000101266.17 TPM= 12.07 Transcript Type= protein_coding
chr20	481097	543821	481097	543821	-	ENST00000349736.9@CSNK2A1	ENST00000349736.9	protein_coding	543672,508451,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,481097	543821,508660,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076	Gene ID= ENSG00000101266.17 TPM= 17.86 Transcript Type= protein_coding
chr20	603797	610398	603797	610398	-	ENST00000246080.3@TCF15	ENST00000246080.3	protein_coding	609713,603797	610398,604665	Gene ID= ENSG00000125878.6 TPM= 55.02 Transcript Type= protein_coding
chr20	644379	646523	644379	646523	+	transcript49.chr20.nnic@NA	transcript49.chr20.nnic	NA	644379	646523	Gene ID= novel_gene_chr20_50 TPM= 1.93 Transcript Type= NA
chr20	646615	653370	646615	653370	-	ENST00000381962.3@SRXN1	ENST00000381962.3	protein_coding	652976,646615	653370,648917	Gene ID= ENSG00000271303.1 TPM= 666.06 Transcript Type= protein_coding
chr20	653557	655181	653557	655181	+	transcript59.chr20.nnic@NA	transcript59.chr20.nnic	NA	653557	655181	Gene ID= novel_gene_chr20_60 TPM= 1.93 Transcript Type= NA
chr20	1118623	1165475	1118623	1165475	+	transcript68.chr20.nnic@PSMF1	transcript68.chr20.nnic	protein_coding	1118623,1125498,1127426,1135121,1163130,1164318,1165029	1118902,1125650,1127508,1135306,1163183,1164492,1165475	Gene ID= ENSG00000125818.17 TPM= 7.72 Transcript Type= NA
chr20	1118598	1167328	1118598	1167328	+	ENST00000246015.8@PSMF1	ENST00000246015.8	protein_coding	1118598,1125498,1127426,1135121,1163130,1164318,1166227	1118902,1125650,1127508,1135306,1163183,1164476,1167328	Gene ID= ENSG00000125818.17 TPM= 88.81 Transcript Type= protein_coding
chr20	1266316	1309328	1266316	1309328	+	ENST00000381873.7@SNPH	ENST00000381873.7	protein_coding	1266316,1266654,1296325,1297145,1300562,1304878	1266397,1266760,1296421,1297252,1300711,1309328	Gene ID= ENSG00000101298.13 TPM= 12.55 Transcript Type= protein_coding
chr20	1309975	1393054	1309975	1393054	-	transcript79.chr20.nic@SDCBP2	transcript79.chr20.nic	protein_coding	1392962,1392834,1320363,1319590,1318318,1313340,1312587,1312337,1310800,1309975	1393054,1392881,1320435,1319659,1318418,1313498,1312762,1312508,1310891,1310495	Gene ID= ENSG00000125775.14 TPM= 2.41 Transcript Type= NA
chr20	1309975	1329239	1309975	1329239	-	ENST00000360779.3@SDCBP2	ENST00000360779.3	protein_coding	1329085,1320363,1319590,1318318,1313340,1312587,1312337,1310800,1309975	1329239,1320435,1319659,1318418,1313498,1312762,1312508,1310891,1310495	Gene ID= ENSG00000125775.14 TPM= 1.45 Transcript Type= protein_coding
chr20	1368979	1393172	1368979	1393172	-	ENST00000439640.4@FKBP1A	ENST00000439640.4	protein_coding	1392962,1375491,1372076,1368979	1393172,1375603,1372240,1370072	Gene ID= ENSG00000088832.16 TPM= 5.79 Transcript Type= protein_coding
chr20	1368978	1393162	1368978	1393162	-	ENST00000400137.8@FKBP1A	ENST00000400137.8	protein_coding	1392962,1392834,1375491,1372076,1368978	1393162,1392881,1375603,1372240,1370072	Gene ID= ENSG00000088832.16 TPM= 61.78 Transcript Type= protein_coding
chr20	1442162	1467692	1442162	1467692	-	ENST00000216879.8@NSFL1C	ENST00000216879.8	protein_coding	1466720,1464329,1458200,1454967,1454213,1453031,1452493,1445666,1442162	1467692,1464426,1458274,1455132,1454305,1453140,1452630,1445830,1443911	Gene ID= ENSG00000088833.17 TPM= 12.23 Transcript Type= protein_coding
chr20	1443523	1466842	1443523	1466842	-	transcript99.chr20.nic@NSFL1C	transcript99.chr20.nic	protein_coding	1466720,1464329,1458200,1454967,1454213,1453031,1452493,1445666,1443523	1466842,1464426,1458274,1455037,1454305,1453140,1452630,1445830,1443911	Gene ID= ENSG00000088833.17 TPM= 5.15 Transcript Type= NA
chr20	1442162	1466905	1442162	1466905	-	ENST00000555944.5@NSFL1C	ENST00000555944.5	protein_coding	1466720,1458200,1454967,1454213,1453031,1452493,1445666,1442162	1466905,1458274,1455037,1454305,1453140,1452630,1445830,1443911	Gene ID= ENSG00000088833.17 TPM= 7.4 Transcript Type= nonsense_mediated_decay
chr20	1443523	1466864	1443523	1466864	-	transcript104.chr20.nic@NSFL1C	transcript104.chr20.nic	protein_coding	1466720,1458200,1454967,1454213,1453031,1452493,1445666,1443523	1466864,1458274,1455132,1454305,1453140,1452630,1445830,1443911	Gene ID= ENSG00000088833.17 TPM= 5.15 Transcript Type= NA
chr20	1442162	1457090	1442162	1457090	-	ENST00000461211.5@NSFL1C	ENST00000461211.5	protein_coding	1455714,1454967,1454213,1453031,1452493,1445666,1442162	1457090,1455132,1454305,1453140,1452630,1445830,1443911	Gene ID= ENSG00000088833.17 TPM= 6.44 Transcript Type= processed_transcript
chr20	1894167	1939894	1894167	1939894	+	ENST00000400068.7@SIRPA	ENST00000400068.7	protein_coding	1894167,1895439,1915099,1921395,1922313,1924764,1927875,1934715,1937320	1894517,1895526,1915455,1921712,1922645,1924877,1927899,1934754,1939894	Gene ID= ENSG00000198053.11 TPM= 15.44 Transcript Type= protein_coding
chr20	2101610	2103277	2101610	2103277	-	transcript118.chr20.nnic@NA	transcript118.chr20.nnic	NA	2101610	2103277	Gene ID= novel_gene_chr20_119 TPM= 2.9 Transcript Type= NA
chr20	2101611	2148555	2101611	2148555	+	ENST00000381482.7@STK35	ENST00000381482.7	protein_coding	2101611,2102768,2116666,2143784	2102175,2103365,2117415,2148555	Gene ID= ENSG00000125834.12 TPM= 12.55 Transcript Type= protein_coding
chr20	2461634	2470853	2461634	2470853	-	ENST00000438552.6@SNRPB	ENST00000438552.6	protein_coding	2470688,2467607,2465708,2463747,2463089,2462636,2461634	2470853,2467758,2465819,2463899,2463227,2462761,2461793	Gene ID= ENSG00000125835.18 TPM= 14 Transcript Type= protein_coding
chr20	2461634	2470853	2461634	2470853	-	ENST00000381342.6@SNRPB	ENST00000381342.6	protein_coding	2470688,2467607,2465708,2463747,2463089,2462636,2461634	2470853,2467758,2465819,2463899,2463227,2462761,2461939	Gene ID= ENSG00000125835.18 TPM= 99.43 Transcript Type= protein_coding
chr20	2461634	2508935	2461634	2508935	-	transcript120.chr20.nnic@ZNF343	transcript120.chr20.nnic	protein_coding	2508881,2500656,2493778,2493519,2492699,2486641,2483559,2467607,2465708,2463747,2463089,2462636,2461634	2508935,2500742,2494044,2493577,2492825,2486763,2484656,2467758,2465819,2463899,2463227,2462761,2461939	Gene ID= ENSG00000088876.11 TPM= 5.79 Transcript Type= NA
chr20	2481823	2508915	2481823	2508915	-	transcript131.chr20.nic@ZNF343	transcript131.chr20.nic	protein_coding	2508800,2500656,2493778,2493519,2492699,2486641,2481823	2508915,2500742,2494044,2493577,2492825,2486763,2484656	Gene ID= ENSG00000088876.11 TPM= 4.44 Transcript Type= NA
chr20	2481823	2508935	2481823	2508935	-	transcript132.chr20.nic@ZNF343	transcript132.chr20.nic	protein_coding	2508881,2500656,2493778,2493519,2492699,2486641,2481823	2508935,2500742,2494044,2493577,2492825,2486763,2484656	Gene ID= ENSG00000088876.11 TPM= 6.37 Transcript Type= NA
chr20	2481817	2508915	2481817	2508915	-	transcript135.chr20.nic@ZNF343	transcript135.chr20.nic	protein_coding	2508800,2500656,2493778,2493519,2492699,2481817	2508915,2500742,2494044,2493577,2492825,2484656	Gene ID= ENSG00000088876.11 TPM= 3.48 Transcript Type= NA
chr20	2481817	2509132	2481817	2509132	-	ENST00000278772.8@ZNF343	ENST00000278772.8	protein_coding	2508881,2500656,2493778,2493519,2492699,2481817	2509132,2500742,2494044,2493577,2492825,2484656	Gene ID= ENSG00000088876.11 TPM= 17.95 Transcript Type= protein_coding
chr20	2491849	2508935	2491849	2508935	-	transcript138.chr20.nic@AL049650.1	transcript138.chr20.nic	protein_coding	2508881,2500656,2493778,2493519,2491849	2508935,2500742,2494044,2493577,2492825	Gene ID= ENSG00000256566.1 TPM= 2.9 Transcript Type= NA
chr20	2624469	2643576	2624469	2643576	+	transcript139.chr20.nnic@TMC2	transcript139.chr20.nnic	protein_coding	2624469,2635926,2637474,2641134	2624531,2636004,2637591,2643576	Gene ID= ENSG00000149488.12 TPM= 2.41 Transcript Type= NA
chr20	2624469	2643576	2624469	2643576	+	transcript141.chr20.nnic@TMC2	transcript141.chr20.nnic	protein_coding	2624469,2637474,2641134	2624531,2637591,2643576	Gene ID= ENSG00000149488.12 TPM= 3.38 Transcript Type= NA
chr20	2652145	2658393	2652145	2658393	+	ENST00000329276.9@NOP56	ENST00000329276.9	protein_coding	2652145,2652842,2653279,2654414,2654749,2655325,2655595,2655934,2656401,2656774,2657081,2657929	2652663,2652931,2653393,2654575,2654947,2655512,2655746,2656034,2656549,2656895,2657218,2658393	Gene ID= ENSG00000101361.16 TPM= 49.23 Transcript Type= protein_coding
chr20	2652566	2658393	2652566	2658393	+	transcript165.chr20.nic@NOP56	transcript165.chr20.nic	protein_coding	2652566,2652842,2653279,2654414,2654749,2655325,2655595,2655934,2657081,2657929	2652663,2652931,2653393,2654575,2654947,2655512,2655746,2656895,2657218,2658393	Gene ID= ENSG00000101361.16 TPM= 2.9 Transcript Type= NA
chr20	2655413	2658392	2655413	2658392	+	ENST00000612233.1@NOP56	ENST00000612233.1	protein_coding	2655413	2658392	Gene ID= ENSG00000101361.16 TPM= 1.93 Transcript Type= retained_intron
chr20	2658399	2664219	2658399	2664219	-	transcript146.chr20.nnic@IDH3B	transcript146.chr20.nnic	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2659109,2658399	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2659312,2658837	Gene ID= ENSG00000101365.20 TPM= 5.31 Transcript Type= NA
chr20	2658395	2664219	2658395	2664219	-	ENST00000380851.9@IDH3B	ENST00000380851.9	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658395	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658522	Gene ID= ENSG00000101365.20 TPM= 103.12 Transcript Type= protein_coding
chr20	2658395	2664219	2658395	2664219	-	transcript153.chr20.nic@IDH3B	transcript153.chr20.nic	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660068,2659699,2659525,2658395	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658522	Gene ID= ENSG00000101365.20 TPM= 9.49 Transcript Type= NA
chr20	2658395	2664219	2658395	2664219	-	ENST00000380843.8@IDH3B	ENST00000380843.8	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658395	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837	Gene ID= ENSG00000101365.20 TPM= 10.14 Transcript Type= protein_coding
chr20	2658395	2664189	2658395	2664189	-	ENST00000474315.5@IDH3B	ENST00000474315.5	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658759,2658395	2664189,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837,2658522	Gene ID= ENSG00000101365.20 TPM= 3.86 Transcript Type= protein_coding
chr20	2840703	2866732	2840703	2866732	+	ENST00000380445.7@VPS16	ENST00000380445.7	protein_coding	2840703,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861615,2861805,2862054,2862579,2862807,2863065,2863290,2863949,2864179,2864365,2864547,2864978,2865148,2865399,2866212,2866430	2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861704,2861899,2862130,2862710,2862934,2863100,2863398,2864083,2864287,2864462,2864654,2865055,2865317,2865495,2866315,2866732	Gene ID= ENSG00000215305.9 TPM= 42.67 Transcript Type= protein_coding
chr20	2840703	2866732	2840703	2866732	+	transcript173.chr20.nnic@VPS16	transcript173.chr20.nnic	protein_coding	2840703,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861615,2861805,2862054,2862807,2863065,2863290,2863949,2864179,2864365,2864547,2864978,2865148,2865399,2866212,2866430	2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861704,2861899,2862130,2862934,2863100,2863398,2864083,2864287,2864462,2864654,2865055,2865317,2865495,2866315,2866732	Gene ID= ENSG00000215305.9 TPM= 2.12 Transcript Type= NA
chr20	2840703	2866732	2840703	2866732	+	transcript176.chr20.nic@VPS16	transcript176.chr20.nic	protein_coding	2840703,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861615,2861805,2862054,2862579,2863065,2863290,2863949,2864179,2864547,2864978,2865148,2865399,2866212,2866430	2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861704,2861899,2862130,2862934,2863100,2863398,2864083,2864462,2864654,2865055,2865317,2865495,2866315,2866732	Gene ID= ENSG00000215305.9 TPM= 3.09 Transcript Type= NA
chr20	2840703	2866732	2840703	2866732	+	transcript177.chr20.nnic@VPS16	transcript177.chr20.nnic	protein_coding	2840703,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861776,2862054,2862579,2863065,2863290,2863949,2864179,2864365,2864547,2864978,2865148,2865399,2866212,2866430	2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861899,2862130,2862934,2863100,2863398,2864083,2864287,2864462,2864654,2865055,2865317,2865495,2866315,2866732	Gene ID= ENSG00000215305.9 TPM= 2.12 Transcript Type= NA
chr20	2840703	2866732	2840703	2866732	+	ENST00000380469.7@VPS16	ENST00000380469.7	protein_coding	2840703,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861615,2863065,2863290,2863949,2864179,2864365,2864547,2864978,2865148,2865399,2866212,2866430	2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861704,2863100,2863398,2864083,2864287,2864462,2864654,2865055,2865317,2865495,2866315,2866732	Gene ID= ENSG00000215305.9 TPM= 5.02 Transcript Type= protein_coding
chr20	2840713	2843516	2840713	2843516	+	transcript191.chr20.nnic@VPS16	transcript191.chr20.nnic	protein_coding	2840713,2843134	2840827,2843516	Gene ID= ENSG00000215305.9 TPM= 1.93 Transcript Type= NA
chr20	2873478	3038355	2873478	3038355	+	transcript196.chr20.nnic@PTPRA	transcript196.chr20.nnic	protein_coding	2873478,2923207,2947982,2964272,2964861,2986765,2988032,2988338,2999331,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2923285,2948024,2964350,2965202,2986849,2988105,2988474,2999425,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038355	Gene ID= ENSG00000132670.20 TPM= 2.9 Transcript Type= NA
chr20	2873478	3038668	2873478	3038668	+	transcript201.chr20.nnic@PTPRA	transcript201.chr20.nnic	protein_coding	2873478,2923207,2964272,2964861,2975215,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2923285,2964350,2965202,2975241,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038668	Gene ID= ENSG00000132670.20 TPM= 4.83 Transcript Type= NA
chr20	2873496	3038668	2873496	3038668	+	ENST00000399903.6@PTPRA	ENST00000399903.6	protein_coding	2873496,2923207,2947982,2964272,2964861,2975215,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2923285,2948024,2964350,2965202,2975241,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038668	Gene ID= ENSG00000132670.20 TPM= 11.58 Transcript Type= protein_coding
chr20	2873491	2874402	2873491	2874402	+	transcript206.chr20.nnic@NA	transcript206.chr20.nnic	NA	2873491	2874402	Gene ID= novel_gene_chr20_207 TPM= 1.93 Transcript Type= NA
chr20	3045945	3048254	3045945	3048254	+	ENST00000380325.3@MRPS26	ENST00000380325.3	protein_coding	3045945,3046373,3046614,3047735	3046280,3046519,3046737,3048254	Gene ID= ENSG00000125901.5 TPM= 130 Transcript Type= protein_coding
chr20	3107573	3160196	3107573	3160196	-	ENST00000217173.6@UBOX5	ENST00000217173.6	protein_coding	3159766,3123312,3121384,3115305,3107573	3160196,3123406,3122584,3115466,3110314	Gene ID= ENSG00000185019.16 TPM= 19.79 Transcript Type= protein_coding
chr20	3107573	3160196	3107573	3160196	-	ENST00000348031.6@UBOX5	ENST00000348031.6	protein_coding	3159766,3123312,3121384,3107573	3160196,3123406,3122584,3110314	Gene ID= ENSG00000185019.16 TPM= 17.86 Transcript Type= protein_coding
chr20	3146525	3159886	3146525	3159886	-	transcript221.chr20.nnic@UBOX5	transcript221.chr20.nnic	protein_coding	3159766,3156073,3155865,3146525	3159886,3156126,3155958,3149260	Gene ID= ENSG00000185019.16 TPM= 11.58 Transcript Type= NA
chr20	3146519	3159897	3146519	3159897	-	ENST00000380266.3@FASTKD5	ENST00000380266.3	protein_coding	3159766,3146519	3159897,3149260	Gene ID= ENSG00000215251.3 TPM= 76.26 Transcript Type= protein_coding
chr20	3162618	3173592	3162618	3173592	-	ENST00000337576.6@LZTS3	ENST00000337576.6	protein_coding	3173455,3167738,3166705,3165497,3162618	3173592,3167961,3167181,3166360,3165152	Gene ID= ENSG00000088899.14 TPM= 4.34 Transcript Type= protein_coding
chr20	3162618	3173595	3162618	3173595	-	transcript226.chr20.nnic@LZTS3	transcript226.chr20.nnic	protein_coding	3173455,3167799,3166705,3165497,3162618	3173595,3167961,3167181,3166360,3165152	Gene ID= ENSG00000088899.14 TPM= 8.21 Transcript Type= NA
chr20	3173697	3175470	3173697	3175470	+	transcript231.chr20.nnic@NA	transcript231.chr20.nnic	NA	3173697	3175470	Gene ID= novel_gene_chr20_232 TPM= 1.93 Transcript Type= NA
chr20	3190520	3204693	3190520	3204693	-	transcript235.chr20.nnic@DDRGK1	transcript235.chr20.nnic	protein_coding	3204537,3203213,3200342,3200001,3195231,3194830,3191648,3191190,3190520	3204693,3203416,3200454,3200102,3195353,3194868,3191821,3191238,3190819	Gene ID= ENSG00000198171.12 TPM= 2.9 Transcript Type= NA
chr20	3190350	3204685	3190350	3204685	-	ENST00000354488.7@DDRGK1	ENST00000354488.7	protein_coding	3204537,3203213,3200342,3200001,3195231,3194830,3191765,3191190,3190350	3204685,3203416,3200454,3200102,3195353,3194868,3191821,3191238,3190819	Gene ID= ENSG00000198171.12 TPM= 13.51 Transcript Type= protein_coding
chr20	3209360	3223870	3209360	3223870	+	ENST00000380113.7@ITPA	ENST00000380113.7	protein_coding	3209360,3213169,3213319,3213985,3215281,3218517,3221841,3223366	3209617,3213226,3213383,3214058,3215312,3218632,3221917,3223870	Gene ID= ENSG00000125877.12 TPM= 26.06 Transcript Type= protein_coding
chr20	3209525	3223870	3209525	3223870	+	ENST00000399838.3@ITPA	ENST00000399838.3	protein_coding	3209525,3213985,3215281,3218517,3221841,3223366	3209617,3214058,3215312,3218632,3221917,3223870	Gene ID= ENSG00000125877.12 TPM= 4.83 Transcript Type= protein_coding
chr20	3251142	3307261	3251142	3307261	-	transcript246.chr20.nnic@C20orf194	transcript246.chr20.nnic	protein_coding	3306884,3304440,3298029,3296861,3294528,3294139,3290129,3287632,3281641,3278912,3270427,3264438,3259922,3259480,3256006,3255219,3253726,3251142	3307261,3304543,3298175,3296949,3294629,3294256,3290217,3287790,3281766,3278949,3270562,3264524,3260028,3259554,3256211,3255284,3253819,3252684	Gene ID= ENSG00000088854.12 TPM= 9.65 Transcript Type= NA
chr20	3293966	3307261	3293966	3307261	-	transcript249.chr20.nnic@C20orf194	transcript249.chr20.nnic	protein_coding	3306884,3304440,3298029,3296861,3294528,3293966	3307261,3304543,3298175,3296949,3294629,3294256	Gene ID= ENSG00000088854.12 TPM= 2.9 Transcript Type= NA
chr20	3471030	3629295	3471030	3629295	+	transcript252.chr20.nnic@ATRN	transcript252.chr20.nnic	protein_coding	3471030,3535253,3540222,3545762,3547284,3549170,3559393,3560662,3562276,3563209,3565348,3572731,3575827,3576859,3578582,3582135,3583898,3584647,3591169,3594479,3596377,3597906,3600946,3604105,3624511,3628900	3471517,3535336,3540335,3545890,3547489,3549338,3559483,3560905,3562459,3563363,3565432,3572951,3575948,3576997,3578772,3582354,3584083,3584880,3591306,3594572,3596429,3598000,3601024,3604262,3624572,3629295	Gene ID= ENSG00000088812.17 TPM= 7.24 Transcript Type= NA
chr20	3470969	3629295	3470969	3629295	+	transcript254.chr20.nnic@ATRN	transcript254.chr20.nnic	protein_coding	3470969,3535253,3545762,3547284,3549170,3559393,3560662,3562276,3563209,3565348,3572731,3575827,3576859,3578582,3582135,3583898,3584647,3591169,3594479,3596377,3597906,3600946,3604105,3624511,3628900	3471517,3535336,3545890,3547489,3549338,3559483,3560905,3562459,3563363,3565432,3572951,3575948,3576997,3578772,3582354,3584083,3584880,3591306,3594572,3596429,3598000,3601024,3604262,3624572,3629295	Gene ID= ENSG00000088812.17 TPM= 3.86 Transcript Type= NA
chr20	3470969	3616064	3470969	3616064	+	transcript255.chr20.nnic@ATRN	transcript255.chr20.nnic	protein_coding	3470969,3535253,3545762,3547284,3549170,3559393,3560662,3562276,3563209,3565348,3572731,3575827,3576859,3578582,3582135,3583898,3584647,3591169,3594479,3596377,3597906,3600946,3604105,3615828	3471517,3535336,3545890,3547489,3549338,3559483,3560905,3562459,3563363,3565432,3572951,3575948,3576997,3578772,3582354,3584083,3584880,3591306,3594572,3596429,3598000,3601024,3604262,3616064	Gene ID= ENSG00000088812.17 TPM= 5.31 Transcript Type= NA
chr20	3667965	3672830	3667965	3672830	-	transcript257.chr20.nic@ADAM33	transcript257.chr20.nic	protein_coding	3672721,3672537,3672134,3671877,3671581,3671419,3671237,3671006,3669546,3669299,3667965	3672830,3672626,3672329,3671985,3671779,3671496,3671345,3671153,3669637,3669370,3669000	Gene ID= ENSG00000149451.17 TPM= 4.34 Transcript Type= NA
chr20	3667970	3682246	3667970	3682246	-	ENST00000379861.8@ADAM33	ENST00000379861.8	protein_coding	3681908,3679492,3677067,3675027,3674773,3674504,3674219,3674064,3673745,3673574,3673354,3672721,3672537,3672134,3671877,3671581,3671419,3671237,3671006,3669546,3669299,3667970	3682246,3679571,3677143,3675105,3674849,3674693,3674284,3674135,3673911,3673658,3673496,3672898,3672626,3672329,3671985,3671779,3671496,3671345,3671153,3669637,3669370,3668997	Gene ID= ENSG00000149451.17 TPM= 1.45 Transcript Type= protein_coding
chr20	3686970	3693216	3686970	3693216	-	transcript260.chr20.nic@SIGLEC1	transcript260.chr20.nic	protein_coding	3692862,3692521,3691903,3691340,3689962,3689600,3689155,3686970	3693216,3692772,3692202,3691600,3690264,3689702,3689227,3688619	Gene ID= ENSG00000088827.12 TPM= 6.76 Transcript Type= NA
chr20	3732696	3753111	3732696	3753111	+	transcript265.chr20.nnic@HSPA12B	transcript265.chr20.nnic	protein_coding	3732696,3738658,3740815,3742284,3744902,3745493,3745915,3748217,3749232,3749508,3749969,3750804,3751511	3732794,3738717,3740912,3742408,3745088,3745597,3746031,3748391,3749318,3749854,3750227,3750907,3753111	Gene ID= ENSG00000132622.10 TPM= 4.18 Transcript Type= NA
chr20	3732667	3753111	3732667	3753111	+	ENST00000254963.6@HSPA12B	ENST00000254963.6	protein_coding	3732667,3738658,3740815,3742284,3744902,3745493,3745915,3748217,3749232,3749750,3749969,3750804,3751511	3732794,3738717,3740912,3742408,3745088,3745597,3746031,3748391,3749318,3749854,3750227,3750907,3753111	Gene ID= ENSG00000132622.10 TPM= 22.52 Transcript Type= protein_coding
chr20	3732711	3753111	3732711	3753111	+	ENST00000399701.1@HSPA12B	ENST00000399701.1	protein_coding	3732711,3738658,3742284,3744902,3745493,3745915,3748217,3749232,3749750,3749969,3750804,3751511	3732794,3738717,3742408,3745088,3745597,3746031,3748391,3749318,3749854,3750227,3750907,3753111	Gene ID= ENSG00000132622.10 TPM= 12.87 Transcript Type= protein_coding
chr20	3753508	3768387	3753508	3768387	-	ENST00000379772.3@C20orf27	ENST00000379772.3	protein_coding	3767663,3760082,3758536,3755469,3754397,3753508	3768387,3760186,3758678,3755607,3754519,3754158	Gene ID= ENSG00000101220.17 TPM= 25.74 Transcript Type= protein_coding
chr20	3753511	3767797	3753511	3767797	-	transcript300.chr20.nic@C20orf27	transcript300.chr20.nic	protein_coding	3767663,3760082,3758536,3755469,3753511	3767797,3760186,3758678,3755607,3754519	Gene ID= ENSG00000101220.17 TPM= 3.54 Transcript Type= NA
chr20	3753508	3767728	3753508	3767728	-	ENST00000217195.12@C20orf27	ENST00000217195.12	protein_coding	3767663,3760007,3758536,3755469,3754397,3753508	3767728,3760186,3758678,3755607,3754519,3754158	Gene ID= ENSG00000101220.17 TPM= 3.54 Transcript Type= protein_coding
chr20	3783851	3786690	3783851	3786690	-	ENST00000379751.4@CENPB	ENST00000379751.4	protein_coding	3783851	3786690	Gene ID= ENSG00000125817.7 TPM= 31.86 Transcript Type= protein_coding
chr20	3795835	3806118	3795835	3806118	+	ENST00000245960.9@CDC25B	ENST00000245960.9	protein_coding	3795835,3797622,3798412,3800288,3800462,3800743,3800971,3801254,3801722,3801924,3802281,3802910,3803108,3803404,3804569,3804821	3796731,3797749,3798463,3800329,3800498,3800865,3801093,3801388,3801802,3802100,3802376,3802972,3803206,3803537,3804680,3806118	Gene ID= ENSG00000101224.17 TPM= 2.9 Transcript Type= protein_coding
chr20	3820524	3825307	3820524	3825307	+	ENST00000246041.6@AP5S1	ENST00000246041.6	protein_coding	3820524,3822102,3823871	3820854,3822293,3825307	Gene ID= ENSG00000125843.10 TPM= 2.09 Transcript Type= protein_coding
chr20	3820531	3825302	3820531	3825302	+	ENST00000379573.6@AP5S1	ENST00000379573.6	protein_coding	3820531,3822102,3823875	3820758,3822293,3825302	Gene ID= ENSG00000125843.10 TPM= 1.61 Transcript Type= protein_coding
chr20	3820536	3825302	3820536	3825302	+	ENST00000379567.6@AP5S1	ENST00000379567.6	protein_coding	3820536,3822102,3823871	3820702,3822293,3825302	Gene ID= ENSG00000125843.10 TPM= 2.09 Transcript Type= protein_coding
chr20	3846823	3875452	3846823	3875452	+	transcript286.chr20.nnic@MAVS	transcript286.chr20.nnic	protein_coding	3846823,3854558,3857635,3861332,3862254,3864256,3873794	3846903,3854741,3857809,3861504,3862413,3864788,3875452	Gene ID= ENSG00000088888.17 TPM= 9.65 Transcript Type= NA
chr20	3846823	3857969	3846823	3857969	+	transcript307.chr20.nic@MAVS	transcript307.chr20.nic	protein_coding	3846823,3854558,3857635	3846903,3854741,3857969	Gene ID= ENSG00000088888.17 TPM= 2.9 Transcript Type= NA
chr20	3870573	3874397	3870573	3874397	+	transcript313.chr20.nnic@NA	transcript313.chr20.nnic	NA	3870573	3874397	Gene ID= novel_gene_chr20_314 TPM= 11.58 Transcript Type= NA
chr20	3889334	3923702	3889334	3923702	+	transcript279.chr20.nnic@PANK2	transcript279.chr20.nnic	protein_coding	3889334,3901552,3907926,3910577,3912458,3916927,3918671,3923244	3889728,3901617,3908278,3910830,3912634,3917050,3918796,3923702	Gene ID= ENSG00000125779.21 TPM= 2.9 Transcript Type= NA
chr20	3889095	3923855	3889095	3923855	+	ENST00000316562.8@PANK2	ENST00000316562.8	protein_coding	3889095,3907926,3910577,3912458,3916927,3918671,3923244	3889728,3908278,3910830,3912634,3917050,3918796,3923855	Gene ID= ENSG00000125779.21 TPM= 2.9 Transcript Type= protein_coding
chr20	3889334	3908620	3889334	3908620	+	transcript310.chr20.nic@PANK2	transcript310.chr20.nic	protein_coding	3889334,3907926	3889728,3908620	Gene ID= ENSG00000125779.21 TPM= 7.72 Transcript Type= NA
chr20	3889415	3923702	3889415	3923702	+	ENST00000610179.5@PANK2	ENST00000610179.5	protein_coding	3889415,3907926,3910577,3912458,3916927,3918671,3923244	3889728,3908278,3910830,3912634,3917050,3918796,3923702	Gene ID= ENSG00000125779.21 TPM= 7.72 Transcript Type= protein_coding
chr20	4148779	4187747	4148779	4187747	+	ENST00000305958.8@SMOX	ENST00000305958.8	protein_coding	4148779,4175030,4177351,4181803,4182089,4183494,4187270	4148977,4175263,4177577,4181976,4182848,4183654,4187747	Gene ID= ENSG00000088826.17 TPM= 5.79 Transcript Type= protein_coding
chr20	4686236	4701590	4686236	4701590	+	ENST00000379440.8@PRNP	ENST00000379440.8	protein_coding	4686236,4699211	4686512,4701590	Gene ID= ENSG00000171867.16 TPM= 161.21 Transcript Type= protein_coding
chr20	5099840	5113042	5099840	5113042	-	ENST00000379286.6@TMEM230	ENST00000379286.6	protein_coding	5112743,5111500,5109332,5106188,5099840	5113042,5111605,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 2.47 Transcript Type= protein_coding
chr20	5099840	5113087	5099840	5113087	-	ENST00000342308.9@TMEM230	ENST00000342308.9	protein_coding	5112961,5111500,5109332,5106188,5099840	5113087,5111605,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 5.37 Transcript Type= protein_coding
chr20	5099840	5113057	5099840	5113057	-	transcript340.chr20.nnic@TMEM230	transcript340.chr20.nnic	protein_coding	5112730,5109332,5106188,5099840	5113057,5109445,5106222,5100931	Gene ID= ENSG00000089063.14 TPM= 6 Transcript Type= NA
chr20	5099840	5113118	5099840	5113118	-	transcript342.chr20.nnic@TMEM230	transcript342.chr20.nnic	protein_coding	5112961,5109332,5106188,5099840	5113118,5109445,5106222,5100931	Gene ID= ENSG00000089063.14 TPM= 13.73 Transcript Type= NA
chr20	5099840	5113050	5099840	5113050	-	ENST00000379283.6@TMEM230	ENST00000379283.6	protein_coding	5112720,5109332,5106188,5099840	5113050,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 3.44 Transcript Type= protein_coding
chr20	5099840	5113049	5099840	5113049	-	ENST00000379279.6@TMEM230	ENST00000379279.6	protein_coding	5112743,5109332,5106188,5099840	5113049,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 10.19 Transcript Type= protein_coding
chr20	5099840	5113103	5099840	5113103	-	ENST00000202834.11@TMEM230	ENST00000202834.11	protein_coding	5112961,5109332,5106188,5099840	5113103,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 126.03 Transcript Type= protein_coding
chr20	5099840	5113042	5099840	5113042	-	ENST00000379299.6@TMEM230	ENST00000379299.6	protein_coding	5112730,5109332,5106188,5099840	5113042,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 26.6 Transcript Type= protein_coding
chr20	5114953	5120026	5114953	5120026	-	ENST00000379143.9@PCNA	ENST00000379143.9	protein_coding	5119578,5118769,5118610,5117470,5115449,5114953	5120026,5118866,5118677,5117664,5115572,5115362	Gene ID= ENSG00000132646.10 TPM= 5.79 Transcript Type= protein_coding
chr20	5126786	5197887	5126786	5197887	+	ENST00000460006.5@CDS2	ENST00000460006.5	protein_coding	5126786,5173523,5175183,5176648,5178817,5182387,5183061,5184858,5185758,5186687,5189067,5189735,5190102	5127149,5173659,5175279,5176745,5178956,5182445,5183143,5184945,5185826,5186839,5189186,5189838,5197887	Gene ID= ENSG00000101290.13 TPM= 22.2 Transcript Type= protein_coding
chr20	5557855	5611059	5557855	5611059	-	transcript368.chr20.nic@GPCPD1	transcript368.chr20.nic	protein_coding	5610842,5604364,5598725,5593327,5586194,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557855	5611059,5604440,5598821,5593411,5586269,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105	Gene ID= ENSG00000125772.12 TPM= 6.76 Transcript Type= NA
chr20	5544404	5611026	5544404	5611026	-	ENST00000379019.5@GPCPD1	ENST00000379019.5	protein_coding	5610842,5604364,5598725,5593327,5586194,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557945,5544404	5611026,5604440,5598821,5593411,5586269,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105,5547850	Gene ID= ENSG00000125772.12 TPM= 13.51 Transcript Type= protein_coding
chr20	5589406	5590551	5589406	5590551	+	transcript372.chr20.nnic@NA	transcript372.chr20.nnic	NA	5589406	5590551	Gene ID= novel_gene_chr20_373 TPM= 1.93 Transcript Type= NA
chr20	5750393	5773447	5750393	5773447	+	ENST00000378979.8@C20orf196	ENST00000378979.8	protein_coding	5750393,5772862,5773132	5750479,5773043,5773447	Gene ID= ENSG00000171984.14 TPM= 1.93 Transcript Type= protein_coding
chr20	5750397	5863912	5750397	5863912	+	ENST00000303142.10@C20orf196	ENST00000303142.10	protein_coding	5750397,5772862,5863024	5750479,5773043,5863912	Gene ID= ENSG00000171984.14 TPM= 3.86 Transcript Type= protein_coding
chr20	5911430	5925361	5911430	5925361	+	ENST00000378961.8@CHGB	ENST00000378961.8	protein_coding	5911430,5916326,5916826,5922335,5924972	5911682,5916372,5916919,5924100,5925361	Gene ID= ENSG00000089199.9 TPM= 1.93 Transcript Type= protein_coding
chr20	5937833	5950558	5937833	5950558	-	ENST00000453074.6@TRMT6	ENST00000453074.6	protein_coding	5950278,5946406,5944162,5943948,5943559,5942428,5941951,5941243,5941053,5937833	5950558,5946533,5944253,5944031,5943683,5942786,5942036,5941345,5941139,5938726	Gene ID= ENSG00000089195.14 TPM= 1.45 Transcript Type= protein_coding
chr20	5944162	5950556	5944162	5950556	-	transcript383.chr20.nic@TRMT6	transcript383.chr20.nic	protein_coding	5950278,5946406,5944805,5944162	5950556,5946533,5944914,5944253	Gene ID= ENSG00000089195.14 TPM= 10.62 Transcript Type= NA
chr20	5937833	5950536	5937833	5950536	-	ENST00000203001.6@TRMT6	ENST00000203001.6	protein_coding	5950278,5946406,5944805,5944162,5943948,5943559,5942428,5941951,5941243,5941053,5937833	5950536,5946533,5944914,5944253,5944031,5943683,5942786,5942036,5941345,5941139,5938726	Gene ID= ENSG00000089195.14 TPM= 20.75 Transcript Type= protein_coding
chr20	6006125	6040057	6006125	6040057	+	transcript401.chr20.nnic@CRLS1	transcript401.chr20.nnic	protein_coding	6006125,6009775,6015361,6031285,6032012,6034464,6039760	6006552,6009912,6015490,6031370,6032080,6034555,6040057	Gene ID= ENSG00000088766.11 TPM= 4.34 Transcript Type= NA
chr20	6006123	6038044	6006123	6038044	+	transcript405.chr20.nnic@CRLS1	transcript405.chr20.nnic	protein_coding	6006123,6009775,6015361,6031285,6032012,6034464,6037074	6006834,6009912,6015490,6031370,6032080,6034555,6038044	Gene ID= ENSG00000088766.11 TPM= 7.72 Transcript Type= NA
chr20	6006090	6040053	6006090	6040053	+	ENST00000378863.8@CRLS1	ENST00000378863.8	protein_coding	6006090,6009775,6015361,6031285,6032012,6034464,6037074	6006552,6009912,6015490,6031370,6032080,6034555,6040053	Gene ID= ENSG00000088766.11 TPM= 14.48 Transcript Type= protein_coding
chr20	6767664	6780280	6767664	6780280	+	ENST00000378827.4@BMP2	ENST00000378827.4	protein_coding	6767664,6770120,6778245	6768875,6770472,6780280	Gene ID= ENSG00000125845.6 TPM= 2.9 Transcript Type= protein_coding
chr20	6767686	6779166	6767686	6779166	+	transcript420.chr20.nnic@BMP2	transcript420.chr20.nnic	protein_coding	6767686,6778245	6768875,6779166	Gene ID= ENSG00000125845.6 TPM= 1.93 Transcript Type= NA
chr20	7977348	8019829	7977348	8019829	-	ENST00000246024.6@TMX4	ENST00000246024.6	protein_coding	8019438,8010200,8001496,7999732,7996026,7987288,7983794,7977348	8019829,8010315,8001541,7999860,7996071,7987389,7983857,7982621	Gene ID= ENSG00000125827.8 TPM= 25.1 Transcript Type= protein_coding
chr20	8628292	8788521	8628292	8788521	+	transcript428.chr20.nic@PLCB1	transcript428.chr20.nic	protein_coding	8628292,8646102,8647900,8649374,8657184,8658538,8684932,8697626,8708670,8716264,8717671,8722354,8724656,8727309,8729050,8733238,8737028,8739261,8740344,8741464,8757046,8760407,8765139,8774539,8788449	8628431,8646181,8647953,8649449,8657284,8658704,8685078,8697783,8708752,8716348,8717848,8722421,8724752,8727393,8729174,8733392,8737192,8739360,8740448,8741573,8757178,8760460,8765358,8774719,8788521	Gene ID= ENSG00000182621.17 TPM= 5.79 Transcript Type= NA
chr20	8881619	8883396	8881619	8883396	+	transcript430.chr20.nnic@NA	transcript430.chr20.nnic	NA	8881619	8883396	Gene ID= novel_gene_chr20_431 TPM= 1.93 Transcript Type= NA
chr20	10405184	10434227	10405184	10434227	-	transcript438.chr20.nnic@MKKS	transcript438.chr20.nnic	protein_coding	10434108,10428730,10420528,10412530,10408628,10407616,10405184	10434227,10428816,10420758,10413931,10408803,10407726,10405687	Gene ID= ENSG00000125863.18 TPM= 9.89 Transcript Type= NA
chr20	10405184	10434258	10405184	10434258	-	transcript440.chr20.nnic@MKKS	transcript440.chr20.nnic	protein_coding	10434108,10420528,10413796,10408628,10407616,10405184	10434258,10420758,10413931,10408803,10407726,10405687	Gene ID= ENSG00000125863.18 TPM= 5.07 Transcript Type= NA
chr20	10405184	10434196	10405184	10434196	-	transcript442.chr20.nnic@MKKS	transcript442.chr20.nnic	protein_coding	10434108,10420528,10408628,10407616,10405184	10434196,10420758,10408803,10407726,10405687	Gene ID= ENSG00000125863.18 TPM= 4.1 Transcript Type= NA
chr20	10413520	10434206	10413520	10434206	-	transcript445.chr20.nic@MKKS	transcript445.chr20.nic	protein_coding	10434108,10420528,10413520	10434206,10420758,10413931	Gene ID= ENSG00000125863.18 TPM= 11.58 Transcript Type= NA
chr20	10637684	10674107	10637684	10674107	-	ENST00000254958.9@JAG1	ENST00000254958.9	protein_coding	10673450,10672701,10663963,10658468,10656398,10652468,10652131,10651581,10650247,10649522,10649061,10648549,10647960,10646939,10645971,10645356,10645143,10644863,10644357,10643778,10642488,10641783,10641460,10641113,10640783,10637684	10674107,10673006,10664014,10658722,10656458,10652598,10652250,10651694,10650360,10649635,10649107,10648722,10648110,10647103,10646084,10645469,10645256,10644979,10644384,10643863,10642601,10641892,10641693,10641244,10640933,10639955	Gene ID= ENSG00000101384.11 TPM= 10.62 Transcript Type= protein_coding
chr20	11890723	11926609	11890723	11926609	+	ENST00000254977.7@BTBD3	ENST00000254977.7	protein_coding	11890723,11918334,11919086,11919718,11922634	11890954,11918601,11919176,11919836,11926609	Gene ID= ENSG00000132640.14 TPM= 5.79 Transcript Type= protein_coding
chr20	13389392	13638940	13389392	13638940	-	ENST00000337743.8@TASP1	ENST00000337743.8	protein_coding	13638894,13629934,13625185,13623446,13587250,13580897,13569507,13559008,13534022,13528433,13483227,13435044,13417448,13389392	13638940,13630152,13625252,13623514,13587370,13580981,13569586,13559114,13534141,13528511,13483337,13435154,13417521,13390452	Gene ID= ENSG00000089123.15 TPM= 6.76 Transcript Type= protein_coding
chr20	13710319	13712868	13710319	13712868	-	transcript452.chr20.nnic@NA	transcript452.chr20.nnic	NA	13710319	13712868	Gene ID= novel_gene_chr20_453 TPM= 2.9 Transcript Type= NA
chr20	13782865	13785406	13782865	13785406	-	transcript467.chr20.nnic@ESF1	transcript467.chr20.nnic	protein_coding	13784880,13782865	13785406,13783183	Gene ID= ENSG00000089048.14 TPM= 3.86 Transcript Type= NA
chr20	13784950	13821582	13784950	13821582	+	ENST00000378106.9@NDUFAF5	ENST00000378106.9	protein_coding	13784950,13787312,13788589,13793180,13794838,13798461,13801486,13808842,13816463,13816875,13817118	13785290,13787352,13788652,13793227,13794941,13798500,13801683,13808902,13816546,13816957,13821582	Gene ID= ENSG00000101247.17 TPM= 2.9 Transcript Type= protein_coding
chr20	13784976	13811204	13784976	13811204	+	transcript465.chr20.nic@NDUFAF5	transcript465.chr20.nic	protein_coding	13784976,13787312,13788589,13793180,13794838,13798461,13801486,13808842	13785290,13787352,13788652,13793227,13794941,13798500,13801683,13811204	Gene ID= ENSG00000101247.17 TPM= 1.93 Transcript Type= NA
chr20	16379162	16573463	16379162	16573463	-	transcript475.chr20.nic@KIF16B	transcript475.chr20.nic	protein_coding	16573229,16528371,16526092,16515548,16512826,16511418,16507958,16506022,16505722,16504372,16497613,16494291,16429863,16428953,16427104,16406374,16404813,16382098,16381694,16379162	16573463,16528440,16526205,16515664,16512923,16511527,16508100,16506190,16505853,16504547,16497678,16494350,16429982,16429004,16427241,16406456,16404901,16382130,16381747,16380163	Gene ID= ENSG00000089177.18 TPM= 15.93 Transcript Type= NA
chr20	16379162	16573463	16379162	16573463	-	transcript476.chr20.nic@KIF16B	transcript476.chr20.nic	protein_coding	16573229,16528371,16526092,16515548,16512826,16511418,16507958,16506022,16505722,16504372,16497613,16494291,16429863,16428953,16427104,16406374,16404813,16381694,16379162	16573463,16528440,16526205,16515664,16512923,16511527,16508100,16506190,16505853,16504547,16497678,16494350,16429982,16429004,16427241,16406456,16404901,16381747,16380163	Gene ID= ENSG00000089177.18 TPM= 8.21 Transcript Type= NA
chr20	16272104	16573433	16272104	16573433	-	ENST00000354981.6@KIF16B	ENST00000354981.6	protein_coding	16573229,16528371,16526092,16515548,16512826,16511418,16507958,16506022,16505722,16504372,16497613,16494291,16429863,16428953,16427104,16406374,16404813,16381694,16378805,16374257,16371665,16370586,16356330,16335926,16312335,16272104	16573433,16528440,16526205,16515664,16512923,16511527,16508100,16506190,16505853,16504547,16497678,16494350,16429982,16429004,16427241,16406456,16404901,16381747,16380163,16374409,16371761,16370636,16356452,16336015,16312418,16273411	Gene ID= ENSG00000089177.18 TPM= 3.86 Transcript Type= protein_coding
chr20	16366927	16368791	16366927	16368791	-	transcript483.chr20.nnic@NA	transcript483.chr20.nnic	NA	16366927	16368791	Gene ID= novel_gene_chr20_484 TPM= 6.76 Transcript Type= NA
chr20	16729961	16741776	16729961	16741776	+	ENST00000377943.9@SNRPB2	ENST00000377943.9	protein_coding	16729961,16731668,16732164,16737261,16738852,16740325,16740846	16730064,16731766,16732336,16737401,16738902,16740413,16741776	Gene ID= ENSG00000125870.10 TPM= 10.62 Transcript Type= protein_coding
chr20	16729984	16742563	16729984	16742563	+	ENST00000246071.7@SNRPB2	ENST00000246071.7	protein_coding	16729984,16731668,16732164,16737261,16738852,16740325,16740846	16730164,16731766,16732336,16737401,16738902,16740413,16742563	Gene ID= ENSG00000125870.10 TPM= 9.65 Transcript Type= protein_coding
chr20	17570082	17608242	17570082	17608242	+	ENST00000474024.5@DSTN	ENST00000474024.5	protein_coding	17570082,17591932,17600738,17604555,17607037	17570211,17592063,17601045,17604631,17608242	Gene ID= ENSG00000125868.15 TPM= 10.62 Transcript Type= protein_coding
chr20	17608152	17608631	17608152	17608631	+	transcript514.chr20.nnic@NA	transcript514.chr20.nnic	NA	17608152	17608631	Gene ID= novel_gene_chr20_515 TPM= 1.93 Transcript Type= NA
chr20	17613678	17682271	17613678	17682271	-	transcript519.chr20.nic@RRBP1	transcript519.chr20.nic	protein_coding	17682028,17658596,17642979,17641797,17636577,17635546,17633460,17629823,17627504,17627348,17625512,17624576,17621855,17621690,17621458,17620715,17620299,17619633,17618596,17616732,17615926,17615431,17614737,17613678	17682271,17660528,17643127,17641919,17636729,17635664,17633613,17629961,17627682,17627382,17625602,17624668,17621947,17621773,17621547,17620807,17620370,17619728,17618679,17616839,17616009,17615529,17614880,17614220	Gene ID= ENSG00000125844.15 TPM= 6.76 Transcript Type= NA
chr20	17613678	17682233	17613678	17682233	-	ENST00000377813.5@RRBP1	ENST00000377813.5	protein_coding	17682028,17679999,17658596,17642979,17641797,17636577,17635546,17633460,17629823,17627504,17627348,17625512,17624576,17621855,17621690,17621458,17620715,17620299,17619633,17618596,17616732,17615926,17615431,17614737,17613678	17682233,17680075,17660528,17643127,17641919,17636729,17635664,17633613,17629961,17627682,17627382,17625602,17624668,17621947,17621773,17621547,17620807,17620370,17619728,17618679,17616839,17616009,17615529,17614880,17614220	Gene ID= ENSG00000125844.15 TPM= 8.69 Transcript Type= protein_coding
chr20	17941597	17968980	17941597	17968980	-	ENST00000377768.7@SNX5	ENST00000377768.7	protein_coding	17968700,17968375,17956933,17955365,17953996,17952587,17951500,17950291,17950132,17949064,17948890,17947486,17943110,17941597	17968980,17968457,17957037,17955475,17954117,17952710,17951595,17950396,17950207,17949103,17948976,17947645,17943195,17942407	Gene ID= ENSG00000089006.16 TPM= 3.38 Transcript Type= protein_coding
chr20	17942206	17968560	17942206	17968560	-	transcript534.chr20.nnic@SNX5	transcript534.chr20.nnic	protein_coding	17968375,17956933,17955365,17951500,17950291,17950132,17949064,17948890,17947486,17943110,17942206	17968560,17957037,17955475,17951595,17950396,17950207,17949103,17948976,17947645,17943195,17942407	Gene ID= ENSG00000089006.16 TPM= 2.9 Transcript Type= NA
chr20	17947148	17968604	17947148	17968604	-	transcript536.chr20.nic@SNX5	transcript536.chr20.nic	protein_coding	17968375,17956933,17955365,17953996,17952587,17951500,17950291,17950132,17949064,17948890,17947148	17968604,17957037,17955475,17954117,17952710,17951595,17950396,17950207,17949103,17948976,17947645	Gene ID= ENSG00000089006.16 TPM= 12.55 Transcript Type= NA
chr20	17967688	17968774	17967688	17968774	-	ENST00000606557.1@SNX5	ENST00000606557.1	protein_coding	17967688	17968774	Gene ID= ENSG00000089006.16 TPM= 5.79 Transcript Type= protein_coding
chr20	17968881	17991122	17968881	17991122	+	transcript538.chr20.nnic@MGME1	transcript538.chr20.nnic	protein_coding	17968881,17969801,17972707,17975684,17988166,17989939	17969141,17970370,17972751,17975903,17988298,17991122	Gene ID= ENSG00000125871.13 TPM= 7.72 Transcript Type= NA
chr20	17968913	17991122	17968913	17991122	+	ENST00000377710.9@MGME1	ENST00000377710.9	protein_coding	17968913,17969801,17975684,17988166,17989939	17969141,17970370,17975903,17988298,17991122	Gene ID= ENSG00000125871.13 TPM= 3.86 Transcript Type= protein_coding
chr20	18137849	18188387	18137849	18188387	+	transcript546.chr20.nic@KAT14	transcript546.chr20.nic	protein_coding	18137849,18142208,18145233,18150821,18159084,18161820,18162377,18181710,18183123,18184602,18187286	18138051,18142919,18145351,18150942,18159265,18162239,18162945,18181846,18183298,18184792,18188387	Gene ID= ENSG00000149474.13 TPM= 3.38 Transcript Type= NA
chr20	18138069	18188035	18138069	18188035	+	transcript549.chr20.nic@KAT14	transcript549.chr20.nic	protein_coding	18138069,18142208,18145233,18150821,18159084,18161820,18162377,18181710,18183123,18184602,18187286	18138444,18142919,18145351,18150942,18159265,18162239,18162945,18181846,18183298,18184792,18188035	Gene ID= ENSG00000149474.13 TPM= 1.93 Transcript Type= NA
chr20	18137873	18143169	18137873	18143169	+	ENST00000432901.3@PET117	ENST00000432901.3	protein_coding	18137873,18142208	18138051,18143169	Gene ID= ENSG00000232838.3 TPM= 25.1 Transcript Type= protein_coding
chr20	18288477	18316996	18288477	18316996	+	ENST00000377671.7@ZNF133	ENST00000377671.7	protein_coding	18288477,18297985,18298289,18305008,18305681,18306298,18315072	18288604,18298062,18298464,18305178,18305807,18306393,18316996	Gene ID= ENSG00000125846.15 TPM= 3.86 Transcript Type= protein_coding
chr20	18288283	18316994	18288283	18316994	+	ENST00000401790.5@ZNF133	ENST00000401790.5	protein_coding	18288283,18305008,18305681,18306298,18315069	18288604,18305178,18305807,18306393,18316994	Gene ID= ENSG00000125846.15 TPM= 2.9 Transcript Type= protein_coding
chr20	18288509	18316991	18288509	18316991	+	transcript565.chr20.nnic@ZNF133	transcript565.chr20.nnic	protein_coding	18288509,18305681,18306298,18315069	18288604,18305807,18306393,18316991	Gene ID= ENSG00000125846.15 TPM= 11.58 Transcript Type= NA
chr20	18288283	18316994	18288283	18316994	+	ENST00000535822.5@ZNF133	ENST00000535822.5	protein_coding	18288283,18306298,18315072	18288604,18306393,18316994	Gene ID= ENSG00000125846.15 TPM= 2.9 Transcript Type= protein_coding
chr20	18467393	18484643	18467393	18484643	+	transcript569.chr20.nnic@POLR3F	transcript569.chr20.nnic	protein_coding	18467393,18468944,18472842,18473242,18473391,18475075,18480038,18480402,18481619,18483481	18467568,18469061,18472909,18473262,18473458,18475187,18480181,18480509,18481810,18484643	Gene ID= ENSG00000132664.11 TPM= 1.93 Transcript Type= NA
chr20	18467127	18484643	18467127	18484643	+	ENST00000377603.4@POLR3F	ENST00000377603.4	protein_coding	18467127,18468944,18472842,18473391,18475075,18480038,18480402,18481619,18483481	18467568,18469061,18472909,18473458,18475187,18480181,18480509,18481810,18484643	Gene ID= ENSG00000132664.11 TPM= 13.51 Transcript Type= protein_coding
chr20	18486540	18497243	18486540	18497243	-	ENST00000337227.8@RBBP9	ENST00000337227.8	protein_coding	18497069,18495838,18493958,18490395,18486540	18497243,18495880,18494063,18490480,18489990	Gene ID= ENSG00000089050.15 TPM= 2.9 Transcript Type= protein_coding
chr20	18567347	18569563	18567347	18569563	+	ENST00000435844.3@SMIM26	ENST00000435844.3	protein_coding	18567347,18569239	18567596,18569563	Gene ID= ENSG00000232388.4 TPM= 104.25 Transcript Type= protein_coding
chr20	18567420	18569563	18567420	18569563	+	ENST00000411646.1@SMIM26	ENST00000411646.1	protein_coding	18567420,18569236	18567596,18569563	Gene ID= ENSG00000232388.4 TPM= 53.09 Transcript Type= protein_coding
chr20	18587893	18763917	18587893	18763917	+	ENST00000377452.3@DTD1	ENST00000377452.3	protein_coding	18587893,18593731,18596006,18628127,18744100,18763360	18588115,18593821,18596241,18628233,18744271,18763917	Gene ID= ENSG00000125821.11 TPM= 26.06 Transcript Type= protein_coding
chr20	19515486	19722899	19515486	19722899	+	transcript587.chr20.nic@SLC24A3	transcript587.chr20.nic	protein_coding	19515486,19580000,19584971,19585441,19654062,19665864,19673601,19681858,19684176,19685100,19693259,19696797,19698568,19717528,19720991	19515564,19580074,19585055,19585544,19654136,19665889,19673654,19681991,19684336,19685361,19693425,19696911,19698680,19717593,19722899	Gene ID= ENSG00000185052.11 TPM= 10.62 Transcript Type= NA
chr20	20017116	20033629	20017116	20033629	+	ENST00000334982.8@NAA20	ENST00000334982.8	protein_coding	20017116,20022456,20025677,20026784,20032508,20033102	20017449,20022480,20025767,20026919,20032653,20033629	Gene ID= ENSG00000173418.11 TPM= 120.18 Transcript Type= protein_coding
chr20	20017390	20033655	20017390	20033655	+	ENST00000398602.2@NAA20	ENST00000398602.2	protein_coding	20017390,20022456,20025677,20026784,20032508,20033102	20018041,20022480,20025767,20026919,20032653,20033655	Gene ID= ENSG00000173418.11 TPM= 1.45 Transcript Type= protein_coding
chr20	20075365	20076892	20075365	20076892	-	transcript629.chr20.nnic@NA	transcript629.chr20.nnic	NA	20075365	20076892	Gene ID= novel_gene_chr20_630 TPM= 168.93 Transcript Type= NA
chr20	20080621	20089214	20080621	20089214	-	transcript619.chr20.nnic@NA	transcript619.chr20.nnic	NA	20088852,20088367,20080621	20089214,20088435,20080997	Gene ID= novel_gene_chr20_620 TPM= 11.58 Transcript Type= NA
chr20	20084237	20089214	20084237	20089214	-	transcript621.chr20.nnic@NA	transcript621.chr20.nnic	NA	20088852,20088367,20084237	20089214,20088435,20084589	Gene ID= novel_gene_chr20_622 TPM= 5.79 Transcript Type= NA
chr20	20088337	20089194	20088337	20089194	-	transcript635.chr20.nnic@NA	transcript635.chr20.nnic	NA	20088337	20089194	Gene ID= novel_gene_chr20_636 TPM= 2.9 Transcript Type= NA
chr20	20605198	20712671	20605198	20712671	-	transcript638.chr20.nic@RALGAPA2	transcript638.chr20.nic	protein_coding	20712375,20680691,20676236,20653530,20643506,20640701,20639785,20637363,20635418,20629363,20620463,20619277,20616043,20611315,20605198	20712671,20680801,20676288,20653587,20643549,20640878,20639900,20637501,20635617,20629590,20620630,20619414,20616191,20611426,20605412	Gene ID= ENSG00000188559.13 TPM= 5.79 Transcript Type= NA
chr20	20604673	20712638	20604673	20712638	-	transcript641.chr20.nnic@RALGAPA2	transcript641.chr20.nnic	protein_coding	20712375,20653530,20643506,20640701,20639785,20637363,20635418,20629363,20620463,20619277,20616043,20611315,20604673	20712638,20653587,20643549,20640878,20639900,20637501,20635617,20629590,20620630,20619414,20616191,20611426,20605412	Gene ID= ENSG00000188559.13 TPM= 1.93 Transcript Type= NA
chr20	21126050	21246618	21126050	21246618	+	transcript654.chr20.nic@KIZ	transcript654.chr20.nic	protein_coding	21126050,21132097,21136390,21145565,21161871,21162850,21205491,21214535,21215583,21229011,21244245,21246479	21126204,21132159,21136552,21145654,21162507,21163159,21205584,21214700,21215648,21229115,21244288,21246618	Gene ID= ENSG00000088970.15 TPM= 1.93 Transcript Type= NA
chr20	21126054	21246622	21126054	21246622	+	ENST00000619189.4@KIZ	ENST00000619189.4	protein_coding	21126054,21132097,21136390,21145565,21161871,21162850,21205491,21214535,21215583,21229011,21232734,21244245,21246479	21126204,21132159,21136552,21145654,21162507,21163159,21205584,21214700,21215648,21229115,21232830,21244288,21246622	Gene ID= ENSG00000088970.15 TPM= 15.44 Transcript Type= protein_coding
chr20	21302731	21303704	21302731	21303704	-	ENST00000622628.1@AL117332.1	ENST00000622628.1	antisense_RNA	21302731	21303704	Gene ID= ENSG00000275457.1 TPM= 3.86 Transcript Type= antisense_RNA
chr20	21303311	21389827	21303311	21389827	+	transcript659.chr20.nnic@XRN2	transcript659.chr20.nnic	protein_coding	21303311,21326279,21326490,21328559,21330481,21330616,21331561,21331768,21332283,21333544,21333704,21333937,21334078,21339044,21340721,21344090,21345834,21346415,21348146,21348341,21349389,21354789,21356080,21356586,21357736,21365421,21365573,21368463,21381994,21386868,21389273	21303473,21326406,21326601,21328670,21330539,21330705,21331633,21331818,21332440,21333618,21333837,21333994,21334185,21339088,21340852,21344208,21345887,21346550,21348253,21348430,21349461,21354872,21356177,21356665,21357792,21365489,21365704,21368590,21382057,21387006,21389827	Gene ID= ENSG00000088930.7 TPM= 4.34 Transcript Type= NA
chr20	21303304	21389827	21303304	21389827	+	ENST00000377191.4@XRN2	ENST00000377191.4	protein_coding	21303304,21326279,21326490,21328559,21330481,21330616,21331561,21331768,21332283,21333544,21333704,21333937,21334078,21339044,21340721,21344090,21346415,21348146,21348341,21349389,21354789,21356080,21356586,21357736,21365421,21365573,21368463,21381994,21386868,21389273	21303473,21326406,21326601,21328670,21330539,21330705,21331633,21331818,21332440,21333618,21333837,21333994,21334185,21339088,21340852,21344208,21346550,21348253,21348430,21349461,21354872,21356177,21356665,21357792,21365489,21365704,21368590,21382057,21387006,21389827	Gene ID= ENSG00000088930.7 TPM= 48.75 Transcript Type= protein_coding
chr20	21303321	21339074	21303321	21339074	+	transcript668.chr20.nnic@XRN2	transcript668.chr20.nnic	protein_coding	21303321,21330481,21330616,21331561,21331768,21332283,21333544,21333704,21333937,21334078,21339044	21303473,21330539,21330705,21331633,21331818,21332440,21333618,21333837,21333994,21334185,21339074	Gene ID= ENSG00000088930.7 TPM= 1.93 Transcript Type= NA
chr20	23045633	23049741	23045633	23049741	-	ENST00000377103.2@THBD	ENST00000377103.2	protein_coding	23045633	23049741	Gene ID= ENSG00000178726.6 TPM= 46.33 Transcript Type= protein_coding
chr20	23079349	23086340	23079349	23086340	-	ENST00000246006.4@CD93	ENST00000246006.4	protein_coding	23084259,23079349	23086340,23083974	Gene ID= ENSG00000125810.9 TPM= 6.76 Transcript Type= protein_coding
chr20	23149853	23152891	23149853	23152891	+	transcript682.chr20.nnic@NA	transcript682.chr20.nnic	NA	23149853	23152891	Gene ID= novel_gene_chr20_683 TPM= 2.9 Transcript Type= NA
chr20	23350736	23354777	23350736	23354777	+	ENST00000254998.2@NXT1	ENST00000254998.2	protein_coding	23350736,23353981	23351061,23354777	Gene ID= ENSG00000132661.3 TPM= 25.1 Transcript Type= protein_coding
chr20	23362182	23373063	23362182	23373063	+	ENST00000338121.9@GZF1	ENST00000338121.9	protein_coding	23362182,23364363,23367003,23368762,23369584,23370091	23362237,23365747,23367097,23368929,23369741,23373063	Gene ID= ENSG00000125812.15 TPM= 3.86 Transcript Type= protein_coding
chr20	23374522	23421488	23374522	23421488	-	ENST00000377026.4@NAPB	ENST00000377026.4	protein_coding	23421305,23402993,23397072,23395139,23394922,23390209,23389946,23381213,23379867,23379445,23374522	23421488,23403072,23397188,23395185,23394999,23390264,23390030,23381317,23379935,23379495,23377486	Gene ID= ENSG00000125814.17 TPM= 1.45 Transcript Type= protein_coding
chr20	23374519	23421519	23374519	23421519	-	ENST00000398425.7@NAPB	ENST00000398425.7	protein_coding	23421305,23402993,23397072,23394922,23390209,23389946,23381213,23379867,23379445,23374519	23421519,23403072,23397188,23394999,23390264,23390030,23381317,23379935,23379495,23377486	Gene ID= ENSG00000125814.17 TPM= 4.34 Transcript Type= protein_coding
chr20	23633648	23638026	23633648	23638026	-	ENST00000376925.7@CST3	ENST00000376925.7	protein_coding	23637620,23635254,23633648	23638026,23635367,23633999	Gene ID= ENSG00000101439.8 TPM= 950.83 Transcript Type= protein_coding
chr20	23637194	23637959	23637194	23637959	-	transcript704.chr20.nnic@NA	transcript704.chr20.nnic	NA	23637194	23637959	Gene ID= novel_gene_chr20_705 TPM= 8.69 Transcript Type= NA
chr20	24962925	24992979	24962925	24992979	-	ENST00000217456.2@APMAP	ENST00000217456.2	protein_coding	24992594,24983903,24978767,24973645,24971460,24970197,24969526,24968892,24962925	24992979,24984019,24978882,24973737,24971576,24970371,24969660,24969084,24964022	Gene ID= ENSG00000101474.11 TPM= 56.47 Transcript Type= protein_coding
chr20	24962944	24992775	24962944	24992775	-	transcript732.chr20.nnic@APMAP	transcript732.chr20.nnic	protein_coding	24992594,24983903,24978767,24973645,24971460,24970197,24969526,24962944	24992775,24984019,24978882,24973737,24971576,24970371,24969660,24964022	Gene ID= ENSG00000101474.11 TPM= 21.72 Transcript Type= NA
chr20	25006232	25058173	25006232	25058173	-	transcript720.chr20.nnic@ACSS1	transcript720.chr20.nnic	protein_coding	25057769,25048085,25030759,25022940,25021389,25020010,25015138,25013961,25013536,25012812,25012601,25009270,25006232	25058173,25048181,25030958,25023092,25021536,25020147,25015230,25014073,25013662,25012939,25012664,25009388,25007941	Gene ID= ENSG00000154930.14 TPM= 14.33 Transcript Type= NA
chr20	25045938	25058980	25045938	25058980	-	ENST00000376726.3@ACSS1	ENST00000376726.3	protein_coding	25057769,25048085,25045938	25058980,25048181,25046872	Gene ID= ENSG00000154930.14 TPM= 1.93 Transcript Type= protein_coding
chr20	25055299	25058139	25055299	25058139	-	transcript735.chr20.nnic@ACSS1	transcript735.chr20.nnic	protein_coding	25057769,25055299	25058139,25055900	Gene ID= ENSG00000154930.14 TPM= 2.9 Transcript Type= NA
chr20	25006232	25058182	25006232	25058182	-	ENST00000323482.8@ACSS1	ENST00000323482.8	protein_coding	25057769,25048085,25030759,25023466,25022940,25021389,25020010,25015138,25013961,25013536,25012812,25012601,25009270,25006232	25058182,25048181,25030958,25023641,25023092,25021536,25020147,25015230,25014073,25013662,25012939,25012664,25009388,25007941	Gene ID= ENSG00000154930.14 TPM= 155.75 Transcript Type= protein_coding
chr20	25055226	25057253	25055226	25057253	-	transcript736.chr20.nnic@NA	transcript736.chr20.nnic	NA	25055226	25057253	Gene ID= novel_gene_chr20_737 TPM= 1.93 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	transcript744.chr20.nnic@ENTPD6	transcript744.chr20.nnic	protein_coding	25195693,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25224880,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 5.79 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	transcript745.chr20.nic@ENTPD6	transcript745.chr20.nic	protein_coding	25195693,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225162,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 8.69 Transcript Type= NA
chr20	25195680	25226729	25195680	25226729	+	transcript748.chr20.nic@ENTPD6	transcript748.chr20.nic	protein_coding	25195680,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225162,25225499	25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 7.72 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	transcript750.chr20.nnic@ENTPD6	transcript750.chr20.nnic	protein_coding	25195693,25206522,25207076,25209849,25210003,25213263,25214867,25215676,25216648,25217502,25221232,25224101,25225162,25225499	25195867,25206590,25207397,25209925,25210193,25213406,25214942,25215711,25216736,25218614,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 2.9 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	transcript753.chr20.nic@ENTPD6	transcript753.chr20.nic	protein_coding	25195693,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25224101,25225205,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 3.06 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	transcript757.chr20.nic@ENTPD6	transcript757.chr20.nic	protein_coding	25195693,25206522,25207076,25209849,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25206590,25207397,25209925,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 4.51 Transcript Type= NA
chr20	25195680	25226729	25195680	25226729	+	transcript760.chr20.nic@ENTPD6	transcript760.chr20.nic	protein_coding	25195680,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25222838,25224101,25225205,25225499	25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 4.99 Transcript Type= NA
chr20	25195700	25226729	25195700	25226729	+	transcript763.chr20.nic@ENTPD6	transcript763.chr20.nic	protein_coding	25195700,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225162,25225499	25195867,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 5.79 Transcript Type= NA
chr20	25195700	25226729	25195700	25226729	+	transcript764.chr20.nic@ENTPD6	transcript764.chr20.nic	protein_coding	25195700,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 18.99 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	ENST00000354989.9@ENTPD6	ENST00000354989.9	protein_coding	25195693,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 23.81 Transcript Type= protein_coding
chr20	25195720	25226729	25195720	25226729	+	ENST00000376652.8@ENTPD6	ENST00000376652.8	protein_coding	25195720,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 23.81 Transcript Type= protein_coding
chr20	25274010	25298014	25274010	25298014	+	transcript774.chr20.nnic@PYGB	transcript774.chr20.nnic	protein_coding	25274010,25274592,25276646,25277244,25278319,25279057,25280266,25280949,25282033,25283176,25284104,25288425,25290481,25292406,25294158,25295604,25296370	25274460,25274723,25276757,25277326,25278462,25279149,25280412,25281112,25282147,25283277,25284251,25288483,25290622,25292613,25294292,25295670,25298014	Gene ID= ENSG00000100994.11 TPM= 15.44 Transcript Type= NA
chr20	25248069	25298014	25248069	25298014	+	ENST00000216962.8@PYGB	ENST00000216962.8	protein_coding	25248069,25259237,25269129,25271383,25274592,25276646,25277244,25278319,25279057,25280266,25280949,25282033,25283176,25284104,25288425,25290481,25292406,25294158,25295604,25296370	25248421,25259338,25269207,25271486,25274723,25276757,25277326,25278462,25279149,25280412,25281112,25282147,25283277,25284251,25288483,25290622,25292613,25294292,25295670,25298014	Gene ID= ENSG00000100994.11 TPM= 42.47 Transcript Type= protein_coding
chr20	25300198	25390865	25300198	25390865	-	transcript782.chr20.nic@ABHD12	transcript782.chr20.nic	protein_coding	25390513,25339227,25338885,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25300198	25390865,25339351,25339004,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25300884	Gene ID= ENSG00000100997.18 TPM= 2.61 Transcript Type= NA
chr20	25300206	25390865	25300206	25390865	-	transcript783.chr20.nnic@ABHD12	transcript783.chr20.nnic	protein_coding	25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25301719,25300206	25390865,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25301833,25300884	Gene ID= ENSG00000100997.18 TPM= 2.61 Transcript Type= NA
chr20	25294743	25390983	25294743	25390983	-	ENST00000376542.7@ABHD12	ENST00000376542.7	protein_coding	25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25294743	25390983,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25295030	Gene ID= ENSG00000100997.18 TPM= 2.12 Transcript Type= protein_coding
chr20	25300198	25390976	25300198	25390976	-	ENST00000339157.9@ABHD12	ENST00000339157.9	protein_coding	25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25300198	25390976,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25300884	Gene ID= ENSG00000100997.18 TPM= 28.67 Transcript Type= protein_coding
chr20	25300198	25390865	25300198	25390865	-	transcript787.chr20.nnic@ABHD12	transcript787.chr20.nnic	protein_coding	25390513,25339227,25338885,25323325,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25300198	25390865,25339351,25339004,25323430,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25300884	Gene ID= ENSG00000100997.18 TPM= 2.61 Transcript Type= NA
chr20	25612935	25624175	25612935	25624175	-	ENST00000304788.3@NANP	ENST00000304788.3	protein_coding	25623859,25612935	25624175,25616581	Gene ID= ENSG00000170191.4 TPM= 5.79 Transcript Type= protein_coding
chr20	25674215	25696751	25674215	25696751	-	transcript800.chr20.nnic@ZNF337	transcript800.chr20.nnic	protein_coding	25696459,25686391,25685996,25685567,25674215	25696751,25686466,25686122,25685662,25677037	Gene ID= ENSG00000130684.13 TPM= 1.93 Transcript Type= NA
chr20	25674215	25696853	25674215	25696853	-	transcript802.chr20.nnic@ZNF337	transcript802.chr20.nnic	protein_coding	25696759,25686391,25685996,25674215	25696853,25686466,25686122,25677037	Gene ID= ENSG00000130684.13 TPM= 7.72 Transcript Type= NA
chr20	25674215	25696841	25674215	25696841	-	ENST00000252979.5@ZNF337	ENST00000252979.5	protein_coding	25696759,25686391,25685996,25685567,25674215	25696841,25686466,25686122,25685662,25677037	Gene ID= ENSG00000130684.13 TPM= 18.34 Transcript Type= protein_coding
chr20	29457115	29459544	29457115	29459544	-	transcript814.chr20.nnic@NA	transcript814.chr20.nnic	NA	29457115	29459544	Gene ID= novel_gene_chr20_815 TPM= 1.93 Transcript Type= NA
chr20	30377214	30377426	30377214	30377426	+	transcript821.chr20.nnic@NA	transcript821.chr20.nnic	NA	30377214	30377426	Gene ID= novel_gene_chr20_822 TPM= 1.93 Transcript Type= NA
chr20	30404772	30406578	30404772	30406578	+	transcript819.chr20.nnic@NA	transcript819.chr20.nnic	NA	30404772	30406578	Gene ID= novel_gene_chr20_820 TPM= 13.51 Transcript Type= NA
chr20	31475293	31484905	31475293	31484905	+	ENST00000201979.2@REM1	ENST00000201979.2	protein_coding	31475293,31476227,31477828,31482287,31484159	31475366,31476785,31477910,31482488,31484905	Gene ID= ENSG00000088320.3 TPM= 1.93 Transcript Type= protein_coding
chr20	31514428	31571606	31514428	31571606	+	ENST00000398174.7@HM13	ENST00000398174.7	protein_coding	31514428,31527484,31538179,31544947,31549029,31549207,31550064,31554746,31559611,31561634,31566210,31568078,31569120	31514734,31527582,31538261,31545035,31549114,31549332,31550121,31554829,31559647,31561736,31566295,31568224,31571606	Gene ID= ENSG00000101294.16 TPM= 42.86 Transcript Type= protein_coding
chr20	31514428	31569567	31514428	31569567	+	ENST00000335574.9@HM13	ENST00000335574.9	protein_coding	31514428,31527484,31538179,31544947,31549029,31549207,31550064,31554746,31559611,31561634,31566210,31568078,31569120	31514734,31527582,31538261,31545035,31549114,31549332,31550121,31554829,31559647,31561736,31566295,31568280,31569567	Gene ID= ENSG00000101294.16 TPM= 59.06 Transcript Type= protein_coding
chr20	31514428	31569567	31514428	31569567	+	ENST00000340852.9@HM13	ENST00000340852.9	protein_coding	31514428,31527484,31538179,31544947,31549029,31549207,31550064,31554746,31559611,31561634,31566210,31569120	31514734,31527582,31538261,31545035,31549114,31549332,31550121,31554829,31559647,31561736,31566295,31569567	Gene ID= ENSG00000101294.16 TPM= 22.38 Transcript Type= protein_coding
chr20	31605283	31606515	31605283	31606515	+	ENST00000376112.3@ID1	ENST00000376112.3	protein_coding	31605283,31606053	31605813,31606515	Gene ID= ENSG00000125968.8 TPM= 4.83 Transcript Type= protein_coding
chr20	31605283	31606515	31605283	31606515	+	ENST00000376105.4@ID1	ENST00000376105.4	protein_coding	31605283	31606515	Gene ID= ENSG00000125968.8 TPM= 2.9 Transcript Type= protein_coding
chr20	31637888	31645006	31637888	31645006	+	ENST00000376075.3@COX4I2	ENST00000376075.3	protein_coding	31637888,31639018,31639933,31643404,31644768	31637962,31639099,31640097,31643535,31645006	Gene ID= ENSG00000131055.4 TPM= 3.86 Transcript Type= protein_coding
chr20	31664452	31722926	31664452	31722926	-	transcript862.chr20.nic@BCL2L1	transcript862.chr20.nic	protein_coding	31722618,31721655,31664452	31722926,31722330,31666086	Gene ID= ENSG00000171552.12 TPM= 17.38 Transcript Type= NA
chr20	31664452	31723968	31664452	31723968	-	transcript866.chr20.nic@BCL2L1	transcript866.chr20.nic	protein_coding	31723735,31721655,31664452	31723968,31722348,31666086	Gene ID= ENSG00000171552.12 TPM= 12.55 Transcript Type= NA
chr20	31664452	31722898	31664452	31722898	-	ENST00000307677.4@BCL2L1	ENST00000307677.4	protein_coding	31722618,31721655,31664452	31722898,31722348,31666086	Gene ID= ENSG00000171552.12 TPM= 32.82 Transcript Type= protein_coding
chr20	31819308	31834689	31819308	31834689	+	ENST00000375994.6@MYLK2	ENST00000375994.6	protein_coding	31819308,31820126,31821439,31823477,31824259,31826605,31826797,31830819,31831013,31831703,31832004,31833717	31819632,31820546,31821737,31823582,31824352,31826714,31826938,31830889,31831141,31831855,31832136,31834689	Gene ID= ENSG00000101306.10 TPM= 48.27 Transcript Type= protein_coding
chr20	31819373	31834689	31819373	31834689	+	ENST00000375985.4@MYLK2	ENST00000375985.4	protein_coding	31819373,31819533,31820126,31821439,31823477,31824259,31826605,31826797,31830819,31831013,31831703,31832004,31833717	31819428,31819632,31820546,31821737,31823582,31824352,31826714,31826938,31830889,31831141,31831855,31832136,31834689	Gene ID= ENSG00000101306.10 TPM= 156.38 Transcript Type= protein_coding
chr20	31944342	31952092	31944342	31952092	-	ENST00000202017.5@PDRG1	ENST00000202017.5	protein_coding	31951875,31950312,31948808,31946496,31944342	31952092,31950387,31948882,31946576,31945889	Gene ID= ENSG00000088356.5 TPM= 2.9 Transcript Type= protein_coding
chr20	32010426	32032180	32010426	32032180	+	transcript887.chr20.nic@CCM2L	transcript887.chr20.nic	protein_coding	32010426,32014904,32017800,32017979,32018943,32022660,32025856,32028995,32029700,32031001	32010484,32015071,32017883,32018162,32019409,32022795,32025919,32029124,32029838,32032180	Gene ID= ENSG00000101331.15 TPM= 3.86 Transcript Type= NA
chr20	32109506	32167258	32109506	32167258	+	ENST00000398022.6@TM9SF4	ENST00000398022.6	protein_coding	32109506,32133013,32136074,32141497,32141766,32142982,32145091,32145312,32146785,32149634,32150622,32150800,32155103,32157794,32158451,32159992,32161276,32165295	32109755,32133126,32136173,32141665,32141895,32143105,32145209,32145423,32146855,32149766,32150703,32150875,32155186,32157969,32158514,32160111,32161365,32167258	Gene ID= ENSG00000101337.15 TPM= 13.03 Transcript Type= protein_coding
chr20	32109714	32170489	32109714	32170489	+	transcript895.chr20.nnic@TM9SF4	transcript895.chr20.nnic	protein_coding	32109714,32133013,32136074,32141497,32141766,32142982,32145091,32145312,32146785,32149634,32150622,32150800,32155103,32157794,32158451,32159992,32161276,32170358	32109755,32133126,32136173,32141665,32141895,32143105,32145209,32145423,32146855,32149766,32150703,32150875,32155186,32157969,32158514,32160111,32161365,32170489	Gene ID= ENSG00000101337.15 TPM= 1.93 Transcript Type= NA
chr20	32109736	32167258	32109736	32167258	+	ENST00000217315.9@TM9SF4	ENST00000217315.9	protein_coding	32109736,32133013,32136074,32141497,32141766,32142982,32145091,32145312,32146785,32149634,32150622,32150800,32155103,32157794,32158451,32159992,32161276,32165295	32110039,32133126,32136173,32141665,32141895,32143105,32145209,32145423,32146855,32149766,32150703,32150875,32155186,32157969,32158514,32160111,32161365,32167258	Gene ID= ENSG00000101337.15 TPM= 3.38 Transcript Type= protein_coding
chr20	32109741	32112248	32109741	32112248	+	transcript900.chr20.nnic@NA	transcript900.chr20.nnic	NA	32109741	32112248	Gene ID= novel_gene_chr20_901 TPM= 1.93 Transcript Type= NA
chr20	32186477	32190360	32186477	32190360	-	ENST00000565928.1@TSPY26P	ENST00000565928.1	transcribed_processed_pseudogene	32186477	32190360	Gene ID= ENSG00000235217.6 TPM= 2.9 Transcript Type= processed_transcript
chr20	32207880	32238667	32207880	32238667	+	ENST00000375749.7@POFUT1	ENST00000375749.7	protein_coding	32207880,32210071,32215269,32216609,32228263,32230819,32234473	32208065,32210192,32215451,32216721,32228455,32231061,32238667	Gene ID= ENSG00000101346.13 TPM= 24.13 Transcript Type= protein_coding
chr20	32277664	32335011	32277664	32335011	+	ENST00000375712.3@KIF3B	ENST00000375712.3	protein_coding	32277664,32309713,32316218,32316527,32316756,32326771,32327556,32330141,32331223	32277765,32311181,32316319,32316649,32316874,32326884,32327661,32330319,32335011	Gene ID= ENSG00000101350.7 TPM= 2.9 Transcript Type= protein_coding
chr20	32434431	32438345	32434431	32438345	+	transcript917.chr20.nnic@NA	transcript917.chr20.nnic	NA	32434431	32438345	Gene ID= novel_gene_chr20_918 TPM= 5.79 Transcript Type= NA
chr20	32702691	32743997	32702691	32743997	-	ENST00000278980.10@COMMD7	ENST00000278980.10	protein_coding	32743308,32728089,32727893,32706704,32706583,32704814,32704440,32704023,32702691	32743997,32728142,32727995,32706760,32706620,32704904,32704489,32704071,32703458	Gene ID= ENSG00000149600.11 TPM= 82.05 Transcript Type= protein_coding
chr20	32702708	32743472	32702708	32743472	-	transcript922.chr20.nnic@COMMD7	transcript922.chr20.nnic	protein_coding	32743308,32728089,32727893,32706704,32706583,32704814,32704440,32704023,32702708	32743472,32728142,32727995,32706760,32706620,32704904,32704489,32704071,32703922	Gene ID= ENSG00000149600.11 TPM= 3.86 Transcript Type= NA
chr20	32702703	32743622	32702703	32743622	-	transcript924.chr20.nic@COMMD7	transcript924.chr20.nic	protein_coding	32743308,32728089,32727893,32706704,32706583,32704814,32704440,32702703	32743622,32728142,32727995,32706760,32706620,32704904,32704489,32704071	Gene ID= ENSG00000149600.11 TPM= 2.9 Transcript Type= NA
chr20	32702703	32743455	32702703	32743455	-	ENST00000446419.6@COMMD7	ENST00000446419.6	protein_coding	32743308,32728089,32727893,32706704,32706583,32704814,32704440,32704023,32702703	32743455,32728139,32727995,32706760,32706620,32704904,32704489,32704071,32703458	Gene ID= ENSG00000149600.11 TPM= 9.65 Transcript Type= protein_coding
chr20	32819893	32850405	32819893	32850405	+	ENST00000375571.5@MAPRE1	ENST00000375571.5	protein_coding	32819893,32825925,32833717,32836634,32839735,32846618,32848672	32820028,32826048,32833862,32836841,32839856,32846770,32850405	Gene ID= ENSG00000101367.8 TPM= 66.61 Transcript Type= protein_coding
chr20	33358839	33401534	33358839	33401534	-	transcript944.chr20.nnic@CDK5RAP1	transcript944.chr20.nnic	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33358839	33401534,33396852,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 1.93 Transcript Type= NA
chr20	33358839	33401561	33358839	33401561	-	ENST00000346416.6@CDK5RAP1	ENST00000346416.6	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33358839	33401561,33397084,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 45.85 Transcript Type= protein_coding
chr20	33348617	33401556	33348617	33401556	-	transcript946.chr20.nnic@CDK5RAP1	transcript946.chr20.nnic	protein_coding	33401428,33396761,33395013,33394032,33392135,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33348617	33401556,33397084,33395116,33394066,33392242,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33350302	Gene ID= ENSG00000101391.20 TPM= 1.93 Transcript Type= NA
chr20	33358839	33401556	33358839	33401556	-	transcript948.chr20.nnic@CDK5RAP1	transcript948.chr20.nnic	protein_coding	33401428,33396761,33395013,33394032,33392135,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33358839	33401556,33397084,33395116,33394066,33392242,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 2.9 Transcript Type= NA
chr20	33358839	33401561	33358839	33401561	-	ENST00000339269.5@CDK5RAP1	ENST00000339269.5	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33374115,33372642,33370499,33366859,33360351,33358839	33401561,33397084,33395116,33394066,33392242,33387533,33385770,33374212,33372697,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 1.93 Transcript Type= protein_coding
chr20	33358839	33401556	33358839	33401556	-	transcript950.chr20.nnic@CDK5RAP1	transcript950.chr20.nnic	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33374115,33372642,33370499,33366859,33358839	33401556,33397084,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33372697,33370629,33367008,33359123	Gene ID= ENSG00000101391.20 TPM= 6.27 Transcript Type= NA
chr20	33407955	33443892	33407955	33443892	-	ENST00000217381.2@SNTA1	ENST00000217381.2	protein_coding	33443311,33438841,33417719,33412575,33412296,33410135,33408701,33407955	33443892,33439026,33417923,33412782,33412426,33410331,33408888,33408599	Gene ID= ENSG00000101400.5 TPM= 527.33 Transcript Type= protein_coding
chr20	33490087	33645541	33490087	33645541	+	ENST00000342704.10@CBFA2T2	ENST00000342704.10	protein_coding	33490087,33606956,33611094,33619517,33623115,33624764,33628350,33629719,33636640,33640341,33644347	33490301,33607099,33611335,33619606,33623296,33625017,33628435,33629914,33636708,33640531,33645541	Gene ID= ENSG00000078699.21 TPM= 5.79 Transcript Type= protein_coding
chr20	33657087	33674388	33657087	33674388	-	transcript999.chr20.nic@NECAB3	transcript999.chr20.nic	protein_coding	33674224,33672398,33670684,33669687,33669375,33660259,33659885,33659653,33658722,33658477,33657942,33657087	33674388,33672422,33670792,33669712,33669472,33660395,33660003,33659732,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 6.83 Transcript Type= NA
chr20	33657087	33674463	33657087	33674463	-	ENST00000375238.8@NECAB3	ENST00000375238.8	protein_coding	33674224,33672398,33670684,33669687,33669375,33660259,33659885,33659653,33659497,33658722,33658477,33657942,33657087	33674463,33672422,33670792,33669712,33669472,33660395,33660003,33659732,33659550,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 34.51 Transcript Type= protein_coding
chr20	33657087	33674408	33657087	33674408	-	ENST00000246190.10@NECAB3	ENST00000246190.10	protein_coding	33674224,33672398,33670684,33669687,33669375,33660259,33659885,33659497,33658722,33658477,33657942,33657087	33674408,33672422,33670792,33669712,33669472,33660395,33660003,33659732,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 10.38 Transcript Type= protein_coding
chr20	33657088	33674420	33657088	33674420	-	ENST00000488489.5@NECAB3	ENST00000488489.5	protein_coding	33674224,33672398,33670684,33669687,33669375,33659885,33659653,33659497,33658722,33658477,33657942,33657088	33674420,33672422,33670781,33669712,33669472,33660395,33659732,33659550,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 6.2 Transcript Type= nonsense_mediated_decay
chr20	33675683	33686404	33675683	33686404	-	ENST00000343380.5@E2F1	ENST00000343380.5	protein_coding	33686004,33680326,33679755,33678201,33677426,33677105,33675683	33686404,33680416,33679974,33678353,33677540,33677330,33676979	Gene ID= ENSG00000101412.12 TPM= 1.93 Transcript Type= protein_coding
chr20	33705927	33720330	33705927	33720330	-	transcript1012.chr20.nnic@PXMP4	transcript1012.chr20.nnic	protein_coding	33720095,33714674,33710555,33707125,33705927	33720330,33714736,33710753,33707969,33706170	Gene ID= ENSG00000101417.11 TPM= 1.93 Transcript Type= NA
chr20	33731657	33792269	33731657	33792269	+	ENST00000342427.6@ZNF341	ENST00000342427.6	protein_coding	33731657,33740902,33745103,33748923,33753172,33757148,33758716,33761862,33766851,33770084,33781291,33783732,33788863,33789518,33790988	33732052,33741012,33745299,33749072,33753423,33757322,33758806,33762055,33767041,33770292,33781387,33783864,33788974,33789588,33792269	Gene ID= ENSG00000131061.13 TPM= 4.83 Transcript Type= protein_coding
chr20	33811293	33852203	33811293	33852203	+	transcript1019.chr20.nic@CHMP4B	transcript1019.chr20.nic	protein_coding	33811293,33848467,33850952,33852077	33811658,33848644,33851066,33852203	Gene ID= ENSG00000101421.3 TPM= 4.83 Transcript Type= NA
chr20	33993722	34080271	33993722	34080271	+	ENST00000246194.7@RALY	ENST00000246194.7	protein_coding	33993722,34031522,34072066,34073563,34073819,34075874,34076702,34077028,34078505,34079910	33994131,34031604,34072330,34073635,34073866,34076040,34076815,34077245,34078553,34080271	Gene ID= ENSG00000125970.11 TPM= 227.95 Transcript Type= protein_coding
chr20	34088298	34112332	34088298	34112332	-	ENST00000374980.2@EIF2S2	ENST00000374980.2	protein_coding	34112096,34105368,34103462,34098498,34097416,34096657,34093675,34090517,34088298	34112332,34105545,34103565,34098633,34097516,34096805,34093731,34090602,34089905	Gene ID= ENSG00000125977.6 TPM= 21 Transcript Type= protein_coding
chr20	34272889	34275064	34272889	34275064	-	transcript1053.chr20.nnic@NA	transcript1053.chr20.nnic	NA	34272889	34275064	Gene ID= novel_gene_chr20_1054 TPM= 3.86 Transcript Type= NA
chr20	34280268	34303357	34280268	34303357	-	transcript1055.chr20.nnic@AHCY	transcript1055.chr20.nnic	protein_coding	34303243,34295395,34294081,34292358,34291419,34290731,34290551,34290332,34285440,34281027,34280268	34303357,34295585,34294156,34292507,34291531,34290938,34290638,34290449,34285634,34281165,34280650	Gene ID= ENSG00000101444.12 TPM= 5.79 Transcript Type= NA
chr20	34280268	34303357	34280268	34303357	-	transcript1057.chr20.nnic@AHCY	transcript1057.chr20.nnic	protein_coding	34303220,34295395,34294081,34292358,34291419,34290731,34290551,34290332,34285440,34280268	34303357,34295585,34294156,34292507,34291531,34290938,34290638,34290449,34285634,34281165	Gene ID= ENSG00000101444.12 TPM= 9.01 Transcript Type= NA
chr20	34280268	34303348	34280268	34303348	-	ENST00000217426.6@AHCY	ENST00000217426.6	protein_coding	34303243,34295395,34294081,34292358,34291419,34290731,34290551,34290332,34285440,34280268	34303348,34295585,34294156,34292507,34291531,34290938,34290638,34290449,34285634,34281165	Gene ID= ENSG00000101444.12 TPM= 96.85 Transcript Type= protein_coding
chr20	34363235	34511393	34363235	34511393	+	ENST00000374864.8@ITCH	ENST00000374864.8	protein_coding	34363235,34369394,34393791,34408651,34412515,34413742,34424480,34438474,34440155,34442208,34445287,34449411,34457390,34462093,34470048,34471444,34477772,34479630,34480599,34481066,34489266,34489822,34492501,34504331,34507695	34363349,34369470,34393881,34408792,34412639,34413879,34424525,34438631,34440344,34442303,34445461,34449480,34457474,34462221,34470120,34471515,34477860,34479789,34480732,34481206,34489386,34489926,34492597,34504403,34511393	Gene ID= ENSG00000078747.14 TPM= 6.76 Transcript Type= protein_coding
chr20	34516423	34540958	34516423	34540958	+	transcript1069.chr20.nnic@DYNLRB1	transcript1069.chr20.nnic	protein_coding	34516423,34519420,34526272,34534628,34540581	34516461,34519498,34526343,34534795,34540958	Gene ID= ENSG00000125971.16 TPM= 4.51 Transcript Type= NA
chr20	34516455	34540958	34516455	34540958	+	ENST00000374846.3@DYNLRB1	ENST00000374846.3	protein_coding	34516455,34526268,34534628,34540581	34516876,34526343,34534795,34540958	Gene ID= ENSG00000125971.16 TPM= 3.54 Transcript Type= protein_coding
chr20	34516409	34540958	34516409	34540958	+	ENST00000357156.6@DYNLRB1	ENST00000357156.6	protein_coding	34516409,34526268,34534628,34540581	34516461,34526343,34534795,34540958	Gene ID= ENSG00000125971.16 TPM= 37.33 Transcript Type= protein_coding
chr20	34558108	34560345	34558108	34560345	+	ENST00000360668.7@MAP1LC3A	ENST00000360668.7	protein_coding	34558108,34559208,34559347,34559736	34558908,34559263,34559453,34560345	Gene ID= ENSG00000101460.12 TPM= 43.92 Transcript Type= protein_coding
chr20	34558718	34560345	34558718	34560345	+	transcript1078.chr20.nnic@MAP1LC3A	transcript1078.chr20.nnic	protein_coding	34558718,34559208,34559347,34559736	34558973,34559263,34559453,34560345	Gene ID= ENSG00000101460.12 TPM= 4.83 Transcript Type= NA
chr20	34558775	34560345	34558775	34560345	+	ENST00000476428.1@MAP1LC3A	ENST00000476428.1	protein_coding	34558775,34559347,34559736	34558908,34559453,34560345	Gene ID= ENSG00000101460.12 TPM= 3.38 Transcript Type= processed_transcript
chr20	34560542	34677085	34560542	34677085	-	ENST00000217446.7@PIGU	ENST00000217446.7	protein_coding	34676956,34657180,34645275,34644164,34637876,34634615,34616042,34588453,34585437,34581548,34575104,34560542	34677085,34657244,34645334,34644226,34637985,34634715,34616139,34588607,34585580,34581672,34575246,34560979	Gene ID= ENSG00000101464.10 TPM= 7.72 Transcript Type= protein_coding
chr20	34714775	34741686	34714775	34741686	-	transcript1083.chr20.nic@NCOA6	transcript1083.chr20.nic	protein_coding	34740363,34736690,34732559,34727259,34714775	34741686,34736758,34732595,34727407,34715365	Gene ID= ENSG00000198646.13 TPM= 6.76 Transcript Type= NA
chr20	34860638	34863944	34860638	34863944	-	transcript1092.chr20.nic@GGT7	transcript1092.chr20.nic	protein_coding	34863680,34863313,34862814,34860638	34863944,34863548,34862965,34861562	Gene ID= ENSG00000131067.16 TPM= 4.18 Transcript Type= NA
chr20	34860638	34872856	34860638	34872856	-	transcript1093.chr20.nic@GGT7	transcript1093.chr20.nic	protein_coding	34872647,34863313,34862814,34860638	34872856,34863548,34862965,34861562	Gene ID= ENSG00000131067.16 TPM= 7.08 Transcript Type= NA
chr20	34860638	34863866	34860638	34863866	-	transcript1095.chr20.nic@GGT7	transcript1095.chr20.nic	protein_coding	34863313,34862814,34860638	34863866,34862965,34861562	Gene ID= ENSG00000131067.16 TPM= 3.21 Transcript Type= NA
chr20	34876542	34927962	34876542	34927962	+	transcript1100.chr20.nnic@ACSS2	transcript1100.chr20.nnic	protein_coding	34876542,34882794,34913096,34913393,34913753,34914096,34914323,34915218,34919435,34920539,34921006,34921330,34921544,34921786,34921963,34923323,34925698,34926105,34926877,34927087	34876823,34882989,34913187,34913496,34913825,34914171,34914437,34915256,34919572,34920709,34921139,34921462,34921600,34921866,34921992,34923431,34925766,34926281,34926951,34927962	Gene ID= ENSG00000131069.19 TPM= 11.78 Transcript Type= NA
chr20	34876435	34927962	34876435	34927962	+	ENST00000360596.6@ACSS2	ENST00000360596.6	protein_coding	34876435,34882794,34913096,34913393,34913753,34914096,34914323,34919435,34920539,34921006,34921330,34921544,34921786,34923323,34925698,34926105,34926877,34927087	34876823,34882989,34913187,34913496,34913825,34914171,34914437,34919572,34920709,34921139,34921462,34921600,34921866,34923431,34925766,34926281,34926951,34927962	Gene ID= ENSG00000131069.19 TPM= 22.71 Transcript Type= protein_coding
chr20	34876542	34882996	34876542	34882996	+	transcript1112.chr20.nic@ACSS2	transcript1112.chr20.nic	protein_coding	34876542,34882794	34876823,34882996	Gene ID= ENSG00000131069.19 TPM= 4.83 Transcript Type= NA
chr20	34876614	34927962	34876614	34927962	+	ENST00000253382.5@ACSS2	ENST00000253382.5	protein_coding	34876614,34882794,34913096,34913393,34913753,34914096,34914323,34915218,34919435,34920539,34921006,34921330,34921544,34921786,34923323,34925698,34926105,34926877,34927087	34876823,34882989,34913187,34913496,34913825,34914171,34914437,34915256,34919572,34920709,34921139,34921462,34921600,34921866,34923431,34925766,34926281,34926951,34927962	Gene ID= ENSG00000131069.19 TPM= 91.25 Transcript Type= protein_coding
chr20	34876590	34927962	34876590	34927962	+	ENST00000477932.5@ACSS2	ENST00000477932.5	protein_coding	34876590,34882794,34919435,34920539,34921006,34921330,34921544,34921786,34923323,34925698,34926105,34926877,34927087	34876823,34882989,34919572,34920709,34921139,34921462,34921600,34921866,34923431,34925766,34926281,34926951,34927962	Gene ID= ENSG00000131069.19 TPM= 7.27 Transcript Type= nonsense_mediated_decay
chr20	34928430	34955817	34928430	34955817	-	ENST00000216951.6@GSS	ENST00000216951.6	protein_coding	34955727,34951724,34945953,34942931,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34929401,34928430	34955817,34951860,34946098,34943006,34942627,34941829,34937023,34936840,34935642,34932133,34931417,34929590,34928951	Gene ID= ENSG00000100983.9 TPM= 37.89 Transcript Type= protein_coding
chr20	34928430	34955813	34928430	34955813	-	transcript1119.chr20.nic@GSS	transcript1119.chr20.nic	protein_coding	34955727,34951724,34945953,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34929401,34928430	34955813,34951860,34946098,34943006,34941829,34937023,34936840,34935642,34932133,34931417,34929590,34928951	Gene ID= ENSG00000100983.9 TPM= 7.48 Transcript Type= NA
chr20	34928433	34955813	34928433	34955813	-	transcript1121.chr20.nic@GSS	transcript1121.chr20.nic	protein_coding	34955727,34951724,34945953,34942931,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34928433	34955813,34951860,34946098,34943006,34942627,34941829,34937023,34936840,34935642,34932133,34931417,34929590	Gene ID= ENSG00000100983.9 TPM= 3.14 Transcript Type= NA
chr20	34928433	34955813	34928433	34955813	-	transcript1126.chr20.nic@GSS	transcript1126.chr20.nic	protein_coding	34955727,34951724,34945953,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34928433	34955813,34951860,34946098,34943006,34941829,34937023,34936840,34935642,34932133,34931417,34929590	Gene ID= ENSG00000100983.9 TPM= 7.48 Transcript Type= NA
chr20	35002404	35092871	35002404	35092871	-	ENST00000252015.2@TRPC4AP	ENST00000252015.2	protein_coding	35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35004458,35003410,35002404	35092871,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021356,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003616,35003283	Gene ID= ENSG00000100991.11 TPM= 147.32 Transcript Type= protein_coding
chr20	35002404	35092807	35002404	35092807	-	ENST00000451813.6@TRPC4AP	ENST00000451813.6	protein_coding	35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35004458,35003410,35002404	35092807,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021332,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003616,35003283	Gene ID= ENSG00000100991.11 TPM= 53.03 Transcript Type= protein_coding
chr20	35115364	35147350	35115364	35147350	-	transcript1151.chr20.nnic@EDEM2	transcript1151.chr20.nnic	protein_coding	35147152,35146825,35144979,35142373,35137880,35134738,35134105,35131642,35126251,35123890,35118598,35115364	35147350,35146935,35145018,35142478,35138005,35134949,35134155,35131783,35126375,35124034,35118719,35115933	Gene ID= ENSG00000088298.12 TPM= 3.38 Transcript Type= NA
chr20	35115357	35147364	35115357	35147364	-	ENST00000374492.7@EDEM2	ENST00000374492.7	protein_coding	35147152,35146825,35144979,35142373,35137880,35134738,35131642,35126251,35123890,35118598,35115357	35147364,35146935,35145018,35142478,35138005,35134949,35131783,35126375,35124034,35118719,35115933	Gene ID= ENSG00000088298.12 TPM= 17.86 Transcript Type= protein_coding
chr20	35153098	35177362	35153098	35177362	+	transcript1154.chr20.nnic@PROCR	transcript1154.chr20.nnic	protein_coding	35153098,35170926,35171090,35172089,35174702,35176168,35176698	35153567,35170999,35171219,35172224,35174953,35176446,35177362	Gene ID= ENSG00000101000.5 TPM= 1.93 Transcript Type= NA
chr20	35172073	35177362	35172073	35177362	+	ENST00000216968.4@PROCR	ENST00000216968.4	protein_coding	35172073,35174702,35176168,35176698	35172224,35174953,35176446,35177362	Gene ID= ENSG00000101000.5 TPM= 1.93 Transcript Type= protein_coding
chr20	35268563	35278115	35268563	35278115	-	transcript1162.chr20.nnic@MMP24-AS1	transcript1162.chr20.nnic	protein_coding	35278009,35272005,35268563	35278115,35272145,35269023	Gene ID= ENSG00000126005.16 TPM= 1.93 Transcript Type= NA
chr20	35276934	35278153	35276934	35278153	-	transcript1165.chr20.nic@MMP24-AS1	transcript1165.chr20.nic	protein_coding	35278046,35277390,35276934	35278153,35277932,35277297	Gene ID= ENSG00000126005.16 TPM= 1.93 Transcript Type= NA
chr20	35277342	35278129	35277342	35278129	-	ENST00000456790.1@MMP24-AS1	ENST00000456790.1	protein_coding	35278009,35277342	35278129,35277932	Gene ID= ENSG00000126005.16 TPM= 2.9 Transcript Type= protein_coding
chr20	35276361	35278027	35276361	35278027	-	ENST00000435366.2@MMP24-AS1	ENST00000435366.2	protein_coding	35278009,35277390,35276361	35278027,35277932,35277297	Gene ID= ENSG00000126005.16 TPM= 4.83 Transcript Type= nonsense_mediated_decay
chr20	35278911	35284985	35278911	35284985	-	ENST00000374450.7@EIF6	ENST00000374450.7	protein_coding	35284726,35284381,35284176,35280654,35279942,35279566,35278911	35284985,35284492,35284261,35280829,35280118,35279747,35279206	Gene ID= ENSG00000242372.6 TPM= 33.79 Transcript Type= protein_coding
chr20	35278911	35284715	35278911	35284715	-	ENST00000374436.7@EIF6	ENST00000374436.7	protein_coding	35284381,35284176,35280654,35279942,35279566,35278911	35284715,35284261,35280829,35280118,35279747,35279206	Gene ID= ENSG00000242372.6 TPM= 8.69 Transcript Type= protein_coding
chr20	35278911	35284804	35278911	35284804	-	ENST00000447927.6@EIF6	ENST00000447927.6	protein_coding	35284726,35284381,35284176,35279942,35279566,35278911	35284804,35284492,35284261,35280118,35279747,35279206	Gene ID= ENSG00000242372.6 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr20	35302566	35411994	35302566	35411994	-	transcript1181.chr20.nic@UQCC1	transcript1181.chr20.nic	protein_coding	35411940,35394092,35392236,35384038,35381918,35374184,35366557,35347164,35314688,35306666,35302566	35411994,35394196,35392277,35384133,35382025,35374256,35366614,35347272,35314765,35306779,35304069	Gene ID= ENSG00000101019.21 TPM= 10.7 Transcript Type= NA
chr20	35302566	35412141	35302566	35412141	-	ENST00000374385.9@UQCC1	ENST00000374385.9	protein_coding	35411940,35394092,35384038,35381918,35374184,35366557,35347164,35314688,35306666,35302566	35412141,35394196,35384133,35382025,35374256,35366614,35347272,35314765,35306779,35304069	Gene ID= ENSG00000101019.21 TPM= 47.38 Transcript Type= protein_coding
chr20	35301560	35411994	35301560	35411994	-	transcript1185.chr20.nic@UQCC1	transcript1185.chr20.nic	protein_coding	35411940,35394092,35384038,35381918,35374184,35366557,35347164,35314688,35301560	35411994,35394196,35384133,35382025,35374256,35366614,35347272,35314765,35306779	Gene ID= ENSG00000101019.21 TPM= 2.25 Transcript Type= NA
chr20	35302566	35411970	35302566	35411970	-	ENST00000359226.6@UQCC1	ENST00000359226.6	protein_coding	35411940,35394092,35384038,35381918,35314688,35306666,35302566	35411970,35394196,35384133,35382025,35314765,35306779,35304069	Gene ID= ENSG00000101019.21 TPM= 2.65 Transcript Type= protein_coding
chr20	35302566	35411973	35302566	35411973	-	ENST00000374384.6@UQCC1	ENST00000374384.6	protein_coding	35411940,35394092,35384038,35381918,35374184,35366557,35347164,35306666,35302566	35411973,35394196,35384133,35382025,35374256,35366614,35347272,35306779,35304069	Gene ID= ENSG00000101019.21 TPM= 2.65 Transcript Type= protein_coding
chr20	35344110	35411974	35344110	35411974	-	ENST00000397554.5@UQCC1	ENST00000397554.5	protein_coding	35411940,35394092,35384038,35381918,35374184,35366557,35344110	35411974,35394196,35384133,35382025,35374256,35366614,35347272	Gene ID= ENSG00000101019.21 TPM= 3.86 Transcript Type= protein_coding
chr20	35542021	35557634	35542021	35557634	+	ENST00000348547.6@ERGIC3	ENST00000348547.6	protein_coding	35542021,35542323,35542513,35542822,35547412,35548509,35548808,35555044,35556033,35556207,35556973,35557194,35557425	35542185,35542393,35542600,35542941,35547505,35548674,35548865,35555075,35556129,35556271,35557109,35557249,35557634	Gene ID= ENSG00000125991.19 TPM= 113.91 Transcript Type= protein_coding
chr20	35626044	35664907	35626044	35664907	-	transcript1210.chr20.nic@CPNE1	transcript1210.chr20.nic	protein_coding	35664760,35658930,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664907,35658982,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 4.51 Transcript Type= NA
chr20	35626044	35664937	35626044	35664937	-	transcript1213.chr20.nic@CPNE1	transcript1213.chr20.nic	protein_coding	35664802,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664937,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 9.33 Transcript Type= NA
chr20	35626044	35664911	35626044	35664911	-	transcript1217.chr20.nic@CPNE1	transcript1217.chr20.nic	protein_coding	35664760,35632795,35632517,35632311,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664911,35632923,35632696,35632385,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 3.86 Transcript Type= NA
chr20	35626044	35664876	35626044	35664876	-	ENST00000397443.6@CPNE1	ENST00000397443.6	protein_coding	35664760,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664876,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 9.33 Transcript Type= protein_coding
chr20	35626044	35626853	35626044	35626853	-	ENST00000462352.5@CPNE1	ENST00000462352.5	protein_coding	35626567,35626044	35626853,35626381	Gene ID= ENSG00000214078.12 TPM= 1.93 Transcript Type= processed_transcript
chr20	35626066	35664875	35626066	35664875	-	ENST00000397442.5@CPNE1	ENST00000397442.5	protein_coding	35664802,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626735,35626066	35664875,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 3.86 Transcript Type= protein_coding
chr20	35648925	35664916	35648925	35664916	-	ENST00000374114.7@RBM12	ENST00000374114.7	protein_coding	35664760,35658930,35648925	35664916,35659014,35655344	Gene ID= ENSG00000244462.7 TPM= 4.83 Transcript Type= protein_coding
chr20	35668055	35699359	35668055	35699359	-	ENST00000374092.8@NFS1	ENST00000374092.8	protein_coding	35699192,35698481,35697684,35696377,35690413,35681888,35680737,35675045,35674512,35674350,35673601,35672755,35668055	35699359,35698590,35697800,35696460,35690565,35681981,35680871,35675202,35674617,35674431,35673684,35672844,35669685	Gene ID= ENSG00000244005.12 TPM= 2.9 Transcript Type= protein_coding
chr20	35668983	35699349	35668983	35699349	-	ENST00000397425.5@NFS1	ENST00000397425.5	protein_coding	35699310,35698481,35697684,35696377,35690413,35681888,35680737,35675045,35674512,35674350,35673601,35672755,35668983	35699349,35698590,35697800,35696460,35690565,35681981,35680871,35675202,35674617,35674431,35673684,35672844,35669685	Gene ID= ENSG00000244005.12 TPM= 18.34 Transcript Type= protein_coding
chr20	35699360	35713697	35699360	35713697	+	transcript1275.chr20.nnic@ROMO1	transcript1275.chr20.nnic	protein_coding	35699360,35699633,35700798,35713667	35699456,35699763,35700980,35713697	Gene ID= ENSG00000125995.15 TPM= 5.79 Transcript Type= NA
chr20	35699353	35700984	35699353	35700984	+	ENST00000374077.7@ROMO1	ENST00000374077.7	protein_coding	35699353,35699633,35700798	35699456,35699763,35700984	Gene ID= ENSG00000125995.15 TPM= 170.38 Transcript Type= protein_coding
chr20	35699451	35700980	35699451	35700980	+	ENST00000336695.4@ROMO1	ENST00000336695.4	protein_coding	35699451,35700798	35699763,35700980	Gene ID= ENSG00000125995.15 TPM= 48.75 Transcript Type= protein_coding
chr20	35703611	35742274	35703611	35742274	-	ENST00000403542.6@RBM39	ENST00000403542.6	protein_coding	35741941,35740824,35740525,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703611	35742274,35740887,35740597,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709274,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 30.21 Transcript Type= nonsense_mediated_decay
chr20	35703610	35742312	35703610	35742312	-	ENST00000361162.10@RBM39	ENST00000361162.10	protein_coding	35741941,35740824,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703610	35742312,35740887,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709256,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 52.9 Transcript Type= protein_coding
chr20	35704326	35742248	35704326	35742248	-	ENST00000444878.5@RBM39	ENST00000444878.5	protein_coding	35741941,35740824,35740525,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35704326	35742248,35740887,35740597,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709256,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 16.41 Transcript Type= nonsense_mediated_decay
chr20	35721867	35742258	35721867	35742258	-	ENST00000374038.7@RBM39	ENST00000374038.7	protein_coding	35741941,35740824,35738968,35731941,35729462,35729312,35725038,35724570,35721867	35742258,35740887,35739017,35732135,35729527,35729362,35725155,35724722,35721877	Gene ID= ENSG00000131051.22 TPM= 1.93 Transcript Type= protein_coding
chr20	35771950	35913335	35771950	35913335	+	transcript1292.chr20.nic@PHF20	transcript1292.chr20.nic	protein_coding	35771950,35801491,35842573,35847350,35858302,35863013,35869438,35870955,35871650,35899370,35913249	35772079,35801605,35842744,35847434,35858381,35863400,35869551,35871134,35871829,35899648,35913335	Gene ID= ENSG00000025293.16 TPM= 37.3 Transcript Type= NA
chr20	35771950	35913307	35771950	35913307	+	transcript1298.chr20.nnic@PHF20	transcript1298.chr20.nnic	protein_coding	35771950,35801491,35842573,35847350,35858302,35863013,35869438,35870955,35871650,35913249	35772079,35801605,35842744,35847434,35858381,35863400,35869551,35871134,35871829,35913307	Gene ID= ENSG00000025293.16 TPM= 5.93 Transcript Type= NA
chr20	35772032	35913335	35772032	35913335	+	transcript1299.chr20.nnic@PHF20	transcript1299.chr20.nnic	protein_coding	35772032,35801491,35842573,35858302,35863013,35869438,35870955,35871650,35899370,35913249	35772079,35801605,35842744,35858381,35863400,35869551,35871134,35871829,35899648,35913335	Gene ID= ENSG00000025293.16 TPM= 2.07 Transcript Type= NA
chr20	35771950	35872110	35771950	35872110	+	transcript1302.chr20.nic@PHF20	transcript1302.chr20.nic	protein_coding	35771950,35801491,35842573,35847350,35858302,35863013,35869438,35870955,35871650	35772079,35801605,35842744,35847434,35858381,35863400,35869551,35871134,35872110	Gene ID= ENSG00000025293.16 TPM= 4 Transcript Type= NA
chr20	35772026	35913335	35772026	35913335	+	ENST00000374000.8@PHF20	ENST00000374000.8	protein_coding	35772026,35800094,35801491,35842573,35847350,35858302,35863013,35869438,35870955,35871650,35899370,35913249	35772079,35800173,35801605,35842744,35847434,35858381,35863400,35869551,35871134,35871829,35899648,35913335	Gene ID= ENSG00000025293.16 TPM= 5.31 Transcript Type= protein_coding
chr20	35772033	35775058	35772033	35775058	+	ENST00000617560.1@PHF20	ENST00000617560.1	protein_coding	35772033,35774488	35772079,35775058	Gene ID= ENSG00000025293.16 TPM= 18.34 Transcript Type= processed_transcript
chr20	35771983	35950381	35771983	35950381	+	ENST00000374012.7@PHF20	ENST00000374012.7	protein_coding	35771983,35801491,35842573,35847350,35858302,35863013,35869438,35870955,35871650,35899370,35913249,35914033,35917484,35927780,35931249,35938697,35940864,35947485	35772079,35801605,35842744,35847434,35858381,35863400,35869551,35871134,35871829,35899648,35913347,35914197,35917662,35927879,35931444,35939108,35941047,35950381	Gene ID= ENSG00000025293.16 TPM= 34.89 Transcript Type= protein_coding
chr20	35953617	35954626	35953617	35954626	-	ENST00000305978.6@SCAND1	ENST00000305978.6	protein_coding	35954448,35953617	35954626,35954339	Gene ID= ENSG00000171222.10 TPM= 76.26 Transcript Type= protein_coding
chr20	35954707	35955368	35954707	35955368	+	ENST00000614708.1@CNBD2	ENST00000614708.1	protein_coding	35954707	35955368	Gene ID= ENSG00000149646.12 TPM= 9.65 Transcript Type= protein_coding
chr20	36045622	36050960	36045622	36050960	-	ENST00000565493.1@NORAD	ENST00000565493.1	lincRNA	36045622	36050960	Gene ID= ENSG00000260032.1 TPM= 72.4 Transcript Type= lincRNA
chr20	36236465	36256933	36236465	36256933	+	transcript1325.chr20.nnic@AAR2	transcript1325.chr20.nnic	protein_coding	36236465,36236882,36239821,36244697,36255578	36236782,36237037,36240625,36244926,36256933	Gene ID= ENSG00000131043.11 TPM= 10.62 Transcript Type= NA
chr20	36236465	36256933	36236465	36256933	+	ENST00000320849.8@AAR2	ENST00000320849.8	protein_coding	36236465,36239821,36244697,36255578	36236503,36240625,36244926,36256933	Gene ID= ENSG00000131043.11 TPM= 75.78 Transcript Type= protein_coding
chr20	36236563	36256933	36236563	36256933	+	transcript1334.chr20.nnic@AAR2	transcript1334.chr20.nnic	protein_coding	36236563,36239821,36244697,36255578	36236966,36240625,36244926,36256933	Gene ID= ENSG00000131043.11 TPM= 9.65 Transcript Type= NA
chr20	36236465	36241355	36236465	36241355	+	transcript1335.chr20.nnic@AAR2	transcript1335.chr20.nnic	protein_coding	36236465,36236882,36239821	36236782,36236966,36241355	Gene ID= ENSG00000131043.11 TPM= 2.9 Transcript Type= NA
chr20	36236485	36256933	36236485	36256933	+	ENST00000373932.3@AAR2	ENST00000373932.3	protein_coding	36236485,36239821,36244697,36255578	36236782,36240625,36244926,36256933	Gene ID= ENSG00000131043.11 TPM= 21.24 Transcript Type= protein_coding
chr20	36461747	36527239	36461747	36527239	+	ENST00000340491.8@DLGAP4	ENST00000340491.8	protein_coding	36461747,36496705,36499588,36500199,36524250,36525851,36526813	36462599,36497066,36499676,36500611,36524341,36526006,36527239	Gene ID= ENSG00000080845.17 TPM= 10.62 Transcript Type= protein_coding
chr20	36605773	36612557	36605773	36612557	+	transcript1354.chr20.nnic@C20orf24	transcript1354.chr20.nnic	protein_coding	36605773,36607715,36607869,36609601,36612010	36606065,36607818,36608000,36609730,36612557	Gene ID= ENSG00000101084.17 TPM= 17.07 Transcript Type= NA
chr20	36605734	36612557	36605734	36612557	+	ENST00000344795.7@C20orf24	ENST00000344795.7	protein_coding	36605734,36607715,36609601,36612010	36606065,36607818,36609730,36612557	Gene ID= ENSG00000101084.17 TPM= 375.2 Transcript Type= protein_coding
chr20	36605789	36612557	36605789	36612557	+	ENST00000483815.5@C20orf24	ENST00000483815.5	protein_coding	36605789,36607715,36607890,36609601,36612010	36606065,36607818,36608000,36609730,36612557	Gene ID= ENSG00000101084.17 TPM= 42.16 Transcript Type= nonsense_mediated_decay
chr20	36605785	36612557	36605785	36612557	+	ENST00000492721.5@C20orf24	ENST00000492721.5	protein_coding	36605785,36607715,36607890,36612010	36606065,36607818,36608000,36612557	Gene ID= ENSG00000101084.17 TPM= 1.38 Transcript Type= nonsense_mediated_decay
chr20	36605822	36612557	36605822	36612557	+	ENST00000342422.3@C20orf24	ENST00000342422.3	protein_coding	36605822,36607715,36612010	36606065,36607818,36612557	Gene ID= ENSG00000101084.17 TPM= 4.28 Transcript Type= protein_coding
chr20	36605817	36612557	36605817	36612557	+	ENST00000373852.9@C20orf24	ENST00000373852.9	protein_coding	36605817,36607715,36609601,36612010	36606065,36607818,36609758,36612557	Gene ID= ENSG00000101084.17 TPM= 1.38 Transcript Type= protein_coding
chr20	36608558	36609537	36608558	36609537	-	transcript1372.chr20.nnic@NA	transcript1372.chr20.nnic	NA	36608558	36609537	Gene ID= novel_gene_chr20_1373 TPM= 3.86 Transcript Type= NA
chr20	36651766	36746078	36651766	36746078	-	ENST00000349004.5@NDRG3	ENST00000349004.5	protein_coding	36746045,36721679,36706972,36688679,36687492,36684413,36682518,36680816,36671341,36666289,36665236,36665046,36660337,36656497,36656360,36651766	36746078,36721783,36707007,36688784,36687612,36684475,36682578,36680902,36671397,36666392,36665301,36665097,36660384,36656532,36656411,36653701	Gene ID= ENSG00000101079.20 TPM= 8.69 Transcript Type= protein_coding
chr20	36777442	36863686	36777442	36863686	-	ENST00000237536.8@SOGA1	ENST00000237536.8	protein_coding	36862658,36839217,36829054,36817407,36815126,36812704,36809982,36808513,36805853,36804735,36802856,36797502,36796882,36793249,36777442	36863686,36839441,36829212,36817469,36816307,36812844,36810107,36808743,36805957,36804902,36803107,36797573,36796952,36794599,36786637	Gene ID= ENSG00000149639.14 TPM= 1.93 Transcript Type= protein_coding
chr20	36890229	36951843	36890229	36951843	-	ENST00000262878.4@SAMHD1	ENST00000262878.4	protein_coding	36951436,36946738,36941039,36935029,36930760,36927182,36919364,36916949,36916722,36912461,36911218,36905364,36904157,36898440,36897822,36890229	36951843,36946804,36941111,36935189,36930875,36927252,36919519,36917049,36916830,36912552,36911333,36905503,36904249,36898544,36897959,36893066	Gene ID= ENSG00000101347.8 TPM= 13.51 Transcript Type= protein_coding
chr20	37178748	37241619	37178748	37241619	+	transcript1394.chr20.nic@RPN2	transcript1394.chr20.nic	protein_coding	37178748,37184180,37198397,37199050,37203885,37204767,37207273,37210047,37213760,37223878,37225688,37228550,37229973,37232296,37234020,37236580,37238402,37241303	37179369,37184373,37198492,37199225,37203960,37204901,37207449,37210165,37213865,37223969,37225802,37228744,37230059,37232391,37234095,37236709,37238449,37241619	Gene ID= ENSG00000118705.16 TPM= 139.81 Transcript Type= NA
chr20	37179046	37241623	37179046	37241623	+	ENST00000237530.10@RPN2	ENST00000237530.10	protein_coding	37179046,37184180,37198397,37199050,37203885,37204767,37207273,37210047,37213760,37223878,37225688,37228550,37229973,37232296,37234020,37236580,37241303	37179369,37184373,37198492,37199225,37203960,37204901,37207449,37210165,37213865,37223969,37225802,37228744,37230059,37232391,37234095,37236709,37241623	Gene ID= ENSG00000118705.16 TPM= 30.89 Transcript Type= protein_coding
chr20	37289639	37317260	37289639	37317260	+	transcript1422.chr20.nnic@MANBAL	transcript1422.chr20.nnic	protein_coding	37289639,37298763,37301208,37316308	37289686,37298879,37301413,37317260	Gene ID= ENSG00000101363.12 TPM= 8.21 Transcript Type= NA
chr20	37289638	37317260	37289638	37317260	+	ENST00000373606.7@MANBAL	ENST00000373606.7	protein_coding	37289638,37301208,37316308	37289686,37301413,37317260	Gene ID= ENSG00000101363.12 TPM= 12.55 Transcript Type= protein_coding
chr20	37289663	37317260	37289663	37317260	+	ENST00000397152.7@MANBAL	ENST00000397152.7	protein_coding	37289663,37297296,37298763,37301208,37316308	37289686,37297534,37298879,37301413,37317260	Gene ID= ENSG00000101363.12 TPM= 4.34 Transcript Type= protein_coding
chr20	37517418	37527931	37517418	37527931	-	ENST00000414542.6@BLCAP	ENST00000414542.6	protein_coding	37527793,37521319,37517418	37527931,37521451,37519350	Gene ID= ENSG00000166619.12 TPM= 34.75 Transcript Type= protein_coding
chr20	37517417	37527931	37517417	37527931	-	ENST00000373537.6@BLCAP	ENST00000373537.6	protein_coding	37527793,37517417	37527931,37519350	Gene ID= ENSG00000166619.12 TPM= 546.37 Transcript Type= protein_coding
chr20	37526626	37527870	37526626	37527870	-	transcript1440.chr20.nnic@BLCAP	transcript1440.chr20.nnic	protein_coding	37527793,37526626	37527870,37527067	Gene ID= ENSG00000166619.12 TPM= 2.9 Transcript Type= NA
chr20	37519122	37522189	37519122	37522189	+	transcript1441.chr20.nnic@NA	transcript1441.chr20.nnic	NA	37519122	37522189	Gene ID= novel_gene_chr20_1442 TPM= 24.13 Transcript Type= NA
chr20	37694042	37872117	37694042	37872117	+	transcript1450.chr20.nic@CTNNBL1	transcript1450.chr20.nic	protein_coding	37694042,37694927,37732879,37737378,37746468,37757559,37765197,37767953,37777345,37777654,37779187,37802867,37840102,37842339,37859899,37860272,37871925	37694152,37695033,37733067,37737484,37746607,37757656,37765290,37768044,37777417,37777712,37779335,37803048,37840199,37842419,37860036,37860344,37872117	Gene ID= ENSG00000132792.18 TPM= 4.03 Transcript Type= NA
chr20	37693955	37872128	37693955	37872128	+	ENST00000621317.4@CTNNBL1	ENST00000621317.4	protein_coding	37693955,37732879,37737378,37746468,37757046,37757571,37765197,37767953,37777345,37777654,37779187,37802867,37840102,37842339,37859899,37860272,37871925	37694152,37733067,37737484,37746630,37757049,37757656,37765290,37768044,37777417,37777712,37779335,37803048,37840199,37842419,37860036,37860344,37872128	Gene ID= ENSG00000132792.18 TPM= 2.58 Transcript Type= protein_coding
chr20	37694006	37872129	37694006	37872129	+	ENST00000361383.10@CTNNBL1	ENST00000361383.10	protein_coding	37694006,37732879,37737378,37746468,37757559,37765197,37767953,37777345,37777654,37779187,37802867,37840102,37842339,37859899,37860272,37871925	37694152,37733067,37737484,37746607,37757656,37765290,37768044,37777417,37777712,37779335,37803048,37840199,37842419,37860036,37860344,37872129	Gene ID= ENSG00000132792.18 TPM= 60.01 Transcript Type= protein_coding
chr20	37983007	38033468	37983007	38033468	-	ENST00000373447.7@TTI1	ENST00000373447.7	protein_coding	38033404,38011515,38006197,38002628,37999188,37996749,37996375,37983007	38033468,38013857,38006397,38002776,37999328,37996953,37996462,37983639	Gene ID= ENSG00000101407.12 TPM= 13.51 Transcript Type= protein_coding
chr20	37983022	38033461	37983022	38033461	-	transcript1459.chr20.nnic@TTI1	transcript1459.chr20.nnic	protein_coding	38033404,38011515,38006197,38002628,37999188,37996375,37983022	38033461,38013857,38006397,38002776,37999328,37996462,37983639	Gene ID= ENSG00000101407.12 TPM= 3.86 Transcript Type= NA
chr20	38033725	38092366	38033725	38092366	+	transcript1468.chr20.nic@RPRD1B	transcript1468.chr20.nic	protein_coding	38033725,38040435,38057532,38059394,38066081,38089726	38034098,38040564,38057644,38059520,38066256,38092366	Gene ID= ENSG00000101413.11 TPM= 1.93 Transcript Type= NA
chr20	38033546	38092366	38033546	38092366	+	ENST00000373433.8@RPRD1B	ENST00000373433.8	protein_coding	38033546,38040435,38048348,38057532,38059394,38066081,38089726	38034098,38040564,38048481,38057644,38059520,38066256,38092366	Gene ID= ENSG00000101413.11 TPM= 52.13 Transcript Type= protein_coding
chr20	38346356	38377023	38346356	38377023	+	ENST00000217407.2@LBP	ENST00000217407.2	protein_coding	38346356,38349548,38350811,38354284,38355346,38360704,38363975,38364576,38366769,38368995,38370738,38371280,38373072,38373937,38376625	38346640,38349662,38350939,38354439,38355409,38360767,38364066,38364752,38366828,38369162,38370805,38371322,38373135,38374013,38377023	Gene ID= ENSG00000129988.5 TPM= 192.1 Transcript Type= protein_coding
chr20	38378769	38382776	38378769	38382776	+	transcript1483.chr20.nnic@NA	transcript1483.chr20.nnic	NA	38378769	38382776	Gene ID= novel_gene_chr20_1484 TPM= 5.79 Transcript Type= NA
chr20	38420592	38435377	38420592	38435377	-	transcript1487.chr20.nic@SNHG17	transcript1487.chr20.nic	processed_transcript	38435027,38434504,38431041,38426419,38422092,38421006,38420592	38435377,38434626,38431112,38426503,38422241,38421098,38420900	Gene ID= ENSG00000196756.11 TPM= 6.76 Transcript Type= NA
chr20	38420592	38435377	38420592	38435377	-	transcript1491.chr20.nic@SNHG17	transcript1491.chr20.nic	processed_transcript	38435027,38434504,38431041,38426419,38421006,38420592	38435377,38434626,38431112,38426503,38421098,38420900	Gene ID= ENSG00000196756.11 TPM= 3.86 Transcript Type= NA
chr20	38420592	38435381	38420592	38435381	-	transcript1492.chr20.nic@SNHG17	transcript1492.chr20.nic	processed_transcript	38435197,38434504,38431041,38426419,38421006,38420592	38435381,38434626,38431112,38426503,38421098,38420900	Gene ID= ENSG00000196756.11 TPM= 2.9 Transcript Type= NA
chr20	38420588	38435333	38420588	38435333	-	ENST00000436764.5@SNHG17	ENST00000436764.5	processed_transcript	38435197,38434504,38431041,38426419,38422092,38421006,38420588	38435333,38434626,38431112,38426503,38422241,38421098,38420900	Gene ID= ENSG00000196756.11 TPM= 2.9 Transcript Type= lincRNA
chr20	38446724	38450921	38446724	38450921	+	ENST00000432153.5@SNHG11	ENST00000432153.5	processed_transcript	38446724,38447466,38447930,38448662,38450336,38450533	38447012,38447623,38448093,38448730,38450447,38450921	Gene ID= ENSG00000174365.19 TPM= 6.76 Transcript Type= lincRNA
chr20	38446678	38450921	38446678	38450921	+	transcript1499.chr20.nnic@NA	transcript1499.chr20.nnic	NA	38446678	38450921	Gene ID= novel_gene_chr20_1500 TPM= 1.93 Transcript Type= NA
chr20	38472816	38578859	38472816	38578859	+	ENST00000397042.7@RALGAPB	ENST00000397042.7	protein_coding	38472816,38488403,38492930,38497353,38499447,38509077,38516192,38517506,38517784,38521497,38524778,38525404,38525895,38531167,38532730,38535086,38539776,38541041,38546243,38548689,38551071,38553867,38558295,38562532,38565356,38567096,38569888,38570769,38574150,38574774	38473069,38488618,38493132,38497516,38499633,38509208,38516370,38517654,38518000,38521698,38524945,38525518,38526042,38531231,38532859,38535207,38539958,38541192,38546430,38548795,38551223,38554076,38558453,38562697,38565478,38567232,38569996,38570847,38574298,38578859	Gene ID= ENSG00000170471.14 TPM= 3.86 Transcript Type= protein_coding
chr20	38748442	38772520	38748442	38772520	+	ENST00000243903.5@ACTR5	ENST00000243903.5	protein_coding	38748442,38750010,38752131,38754957,38755857,38765402,38766238,38767464,38771559	38748853,38750239,38752300,38755174,38756039,38765518,38766377,38767596,38772520	Gene ID= ENSG00000101442.9 TPM= 27.99 Transcript Type= protein_coding
chr20	38962335	39039723	38962335	39039723	+	ENST00000252011.7@DHX35	ENST00000252011.7	protein_coding	38962335,38969081,38972559,38983699,38988813,38991454,38992356,38994821,39001730,39002772,39003749,39006146,39010280,39014880,39018804,39021841,39023690,39025230,39028418,39030704,39034206,39038499	38962407,38969214,38972651,38983776,38988917,38991515,38992425,38994880,39001842,39002868,39003907,39006356,39010404,39014934,39018899,39021935,39023767,39025359,39028499,39030775,39034317,39039723	Gene ID= ENSG00000101452.14 TPM= 8.69 Transcript Type= protein_coding
chr20	40685848	40689240	40685848	40689240	-	ENST00000373313.2@MAFB	ENST00000373313.2	protein_coding	40685848	40689240	Gene ID= ENSG00000204103.3 TPM= 43.44 Transcript Type= protein_coding
chr20	41028791	41081210	41028791	41081210	+	transcript1525.chr20.nic@TOP1	transcript1525.chr20.nic	protein_coding	41028791,41029431,41061394,41076171,41077582,41080085,41081165	41029100,41029455,41061490,41076294,41077637,41080180,41081210	Gene ID= ENSG00000198900.5 TPM= 5.79 Transcript Type= NA
chr20	41028818	41124487	41028818	41124487	+	ENST00000361337.2@TOP1	ENST00000361337.2	protein_coding	41028818,41029431,41061394,41076171,41077582,41080085,41081165,41084462,41092472,41097220,41098215,41100056,41101209,41112782,41113970,41115371,41116278,41118169,41121696,41122006,41123195	41029100,41029455,41061490,41076294,41077637,41080180,41081240,41084568,41092587,41097341,41098337,41100243,41101353,41112925,41114155,41115439,41116392,41118296,41121790,41122155,41124487	Gene ID= ENSG00000198900.5 TPM= 6.76 Transcript Type= protein_coding
chr20	41136960	41175721	41136960	41175721	+	ENST00000244007.7@PLCG1	ENST00000244007.7	protein_coding	41136960,41137521,41159606,41159870,41160106,41162452,41162642,41162958,41163203,41163378,41163715,41163921,41164081,41164933,41165245,41165450,41165639,41166194,41166476,41166679,41167852,41168767,41169079,41169457,41170112,41172193,41172421,41172729,41173420,41173652,41173923,41174124,41174467	41137035,41137858,41159758,41159963,41160153,41162536,41162725,41162992,41163275,41163479,41163833,41164006,41164201,41165101,41165367,41165551,41165826,41166394,41166595,41166859,41167929,41168870,41169175,41169526,41170269,41172289,41172645,41172877,41173534,41173813,41174011,41174311,41175721	Gene ID= ENSG00000124181.14 TPM= 4.83 Transcript Type= protein_coding
chr20	41182115	41317602	41182115	41317602	-	ENST00000559234.5@ZHX3	ENST00000559234.5	protein_coding	41317509,41268979,41202057,41182115	41317602,41269083,41205066,41185201	Gene ID= ENSG00000174306.21 TPM= 9.65 Transcript Type= protein_coding
chr20	41402101	41618494	41402101	41618494	-	ENST00000373233.7@CHD6	ENST00000373233.7	protein_coding	41618340,41551305,41533050,41514805,41512846,41499295,41498168,41497384,41493858,41493538,41491698,41489778,41488428,41487665,41484352,41483309,41473322,41457264,41455800,41454626,41452740,41451826,41450946,41447882,41445665,41440000,41437274,41426093,41425178,41423492,41420508,41417198,41416588,41415186,41413324,41412144,41402101	41618494,41551360,41533570,41514952,41512995,41499357,41498226,41497501,41493944,41493672,41491819,41490021,41488604,41487808,41484607,41483519,41473517,41457428,41455979,41454736,41452942,41452025,41451105,41447971,41445768,41440129,41437334,41426153,41425394,41423700,41422079,41417349,41416794,41415638,41413515,41412263,41405489	Gene ID= ENSG00000124177.14 TPM= 2.9 Transcript Type= protein_coding
chr20	43457883	43463601	43457883	43463601	+	transcript1539.chr20.nnic@SRSF6	transcript1539.chr20.nnic	protein_coding	43457883,43458361,43459153,43459771,43460033,43460515,43463344	43458140,43458509,43459420,43459895,43460241,43460598,43463601	Gene ID= ENSG00000124193.14 TPM= 1.93 Transcript Type= NA
chr20	43590931	43647296	43590931	43647296	+	ENST00000373030.7@IFT52	ENST00000373030.7	protein_coding	43590931,43594693,43596435,43603760,43604183,43605002,43613850,43618940,43620857,43623891,43635926,43637145,43642479,43646936	43591054,43594817,43596522,43603889,43604258,43605073,43613976,43619026,43620925,43624045,43636013,43637253,43642624,43647296	Gene ID= ENSG00000101052.12 TPM= 2.9 Transcript Type= protein_coding
chr20	43590990	43647222	43590990	43647222	+	ENST00000373039.4@IFT52	ENST00000373039.4	protein_coding	43590990,43594693,43596435,43603760,43604183,43605002,43613850,43618940,43620857,43623891,43635926,43637145,43642479,43646936	43591029,43594817,43596522,43603889,43604258,43605073,43613976,43619026,43620925,43624045,43636013,43637253,43642624,43647222	Gene ID= ENSG00000101052.12 TPM= 1.93 Transcript Type= protein_coding
chr20	44107797	44108645	44107797	44108645	+	transcript1561.chr20.nnic@NA	transcript1561.chr20.nnic	NA	44107797	44108645	Gene ID= novel_gene_chr20_1562 TPM= 1.93 Transcript Type= NA
chr20	44109621	44112606	44109621	44112606	-	transcript1565.chr20.nnic@NA	transcript1565.chr20.nnic	NA	44109621	44112606	Gene ID= novel_gene_chr20_1566 TPM= 1.93 Transcript Type= NA
chr20	44111695	44187578	44111695	44187578	-	ENST00000372980.3@JPH2	ENST00000372980.3	protein_coding	44186327,44159618,44118505,44115665,44114782,44111695	44187578,44160407,44118623,44116386,44114876,44113503	Gene ID= ENSG00000149596.6 TPM= 344.62 Transcript Type= protein_coding
chr20	44180507	44187188	44180507	44187188	-	transcript1559.chr20.nnic@JPH2	transcript1559.chr20.nnic	protein_coding	44186327,44180507	44187188,44181570	Gene ID= ENSG00000149596.6 TPM= 1.93 Transcript Type= NA
chr20	44181235	44187478	44181235	44187478	-	transcript1560.chr20.nnic@JPH2	transcript1560.chr20.nnic	protein_coding	44186327,44181235	44187478,44181570	Gene ID= ENSG00000149596.6 TPM= 1.93 Transcript Type= NA
chr20	44196501	44210767	44196501	44210767	-	transcript1588.chr20.nnic@OSER1	transcript1588.chr20.nnic	protein_coding	44210696,44196501	44210767,44197739	Gene ID= ENSG00000132823.10 TPM= 4.1 Transcript Type= NA
chr20	44196496	44210791	44196496	44210791	-	ENST00000255174.2@OSER1	ENST00000255174.2	protein_coding	44210696,44206881,44202961,44196496	44210791,44206998,44203074,44197739	Gene ID= ENSG00000132823.10 TPM= 98.7 Transcript Type= protein_coding
chr20	44210969	44213295	44210969	44213295	+	transcript1589.chr20.nnic@NA	transcript1589.chr20.nnic	NA	44210969	44213295	Gene ID= novel_gene_chr20_1590 TPM= 1.93 Transcript Type= NA
chr20	44302840	44311182	44302840	44311182	-	transcript1593.chr20.nnic@FITM2	transcript1593.chr20.nnic	protein_coding	44310976,44306251,44302840	44311182,44307240,44305580	Gene ID= ENSG00000197296.5 TPM= 4.83 Transcript Type= NA
chr20	44302840	44311240	44302840	44311240	-	transcript1594.chr20.nnic@FITM2	transcript1594.chr20.nnic	protein_coding	44310976,44306158,44302840	44311240,44307240,44305583	Gene ID= ENSG00000197296.5 TPM= 13.51 Transcript Type= NA
chr20	44475888	44494603	44475888	44494603	+	ENST00000372904.7@TTPAL	ENST00000372904.7	protein_coding	44475888,44478624,44479985,44484337,44486596,44489263	44475991,44478647,44480444,44484530,44486706,44494603	Gene ID= ENSG00000124120.10 TPM= 4.83 Transcript Type= protein_coding
chr20	44496224	44522085	44496224	44522085	-	ENST00000255175.5@SERINC3	ENST00000255175.5	protein_coding	44521913,44513879,44512801,44511289,44509891,44506827,44504801,44503815,44501073,44500258,44496224	44522085,44514040,44512994,44511368,44510028,44506996,44504891,44503995,44501300,44500434,44496355	Gene ID= ENSG00000132824.13 TPM= 1.93 Transcript Type= protein_coding
chr20	44497431	44522109	44497431	44522109	-	ENST00000342374.4@SERINC3	ENST00000342374.4	protein_coding	44521913,44513879,44512801,44511289,44509891,44506827,44504801,44503815,44501073,44497431	44522109,44514040,44512994,44511368,44510028,44506996,44504891,44503995,44501300,44500434	Gene ID= ENSG00000132824.13 TPM= 23.17 Transcript Type= protein_coding
chr20	44531785	44619037	44531785	44619037	+	ENST00000372892.7@PKIG	ENST00000372892.7	protein_coding	44531785,44582585,44589797,44614534,44618285	44531978,44582731,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 23.89 Transcript Type= protein_coding
chr20	44531785	44619037	44531785	44619037	+	ENST00000372891.7@PKIG	ENST00000372891.7	protein_coding	44531785,44582585,44585100,44589797,44614534,44618285	44531978,44582731,44585204,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 5.07 Transcript Type= protein_coding
chr20	44531785	44619037	44531785	44619037	+	ENST00000372894.7@PKIG	ENST00000372894.7	protein_coding	44531785,44589797,44614534,44618285	44531978,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 8.93 Transcript Type= protein_coding
chr20	44582549	44619037	44582549	44619037	+	ENST00000372886.5@PKIG	ENST00000372886.5	protein_coding	44582549,44589797,44614534,44618285	44582731,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 29.68 Transcript Type= protein_coding
chr20	44619522	44651742	44619522	44651742	-	ENST00000372874.8@ADA	ENST00000372874.8	protein_coding	44651575,44636227,44629047,44626456,44625569,44624202,44623007,44622829,44622588,44621018,44620299,44619522	44651742,44636288,44629169,44626599,44625684,44624329,44623078,44622930,44622652,44621147,44620401,44619847	Gene ID= ENSG00000196839.12 TPM= 13.51 Transcript Type= protein_coding
chr20	44714844	44727811	44714844	44727811	+	ENST00000372868.6@WISP2	ENST00000372868.6	protein_coding	44714844,44715366,44719897,44724738,44727087	44715161,44715450,44720113,44724992,44727811	Gene ID= ENSG00000064205.10 TPM= 4.83 Transcript Type= protein_coding
chr20	44885676	44908532	44885676	44908532	+	ENST00000353703.8@YWHAB	ENST00000353703.8	protein_coding	44885676,44901531,44903993,44904968,44906001,44906382	44885886,44901833,44904116,44905131,44906096,44908532	Gene ID= ENSG00000166913.12 TPM= 13.03 Transcript Type= protein_coding
chr20	44885711	44908532	44885711	44908532	+	ENST00000372839.7@YWHAB	ENST00000372839.7	protein_coding	44885711,44887648,44901531,44903993,44904968,44906001,44906382	44885886,44887742,44901833,44904116,44905131,44906096,44908532	Gene ID= ENSG00000166913.12 TPM= 7.24 Transcript Type= protein_coding
chr20	44942130	44960486	44942130	44960486	-	ENST00000372813.3@TOMM34	ENST00000372813.3	protein_coding	44960207,44956386,44955068,44951833,44948730,44943453,44942130	44960486,44956485,44955220,44952002,44948877,44943579,44943213	Gene ID= ENSG00000025772.7 TPM= 3.86 Transcript Type= protein_coding
chr20	44942221	44960438	44942221	44960438	-	transcript1662.chr20.nnic@TOMM34	transcript1662.chr20.nnic	protein_coding	44960207,44956386,44955068,44951833,44943453,44942221	44960438,44956485,44955220,44952002,44943579,44943213	Gene ID= ENSG00000025772.7 TPM= 2.9 Transcript Type= NA
chr20	44966474	45079959	44966474	45079959	+	ENST00000372806.7@STK4	ENST00000372806.7	protein_coding	44966474,44972078,44978443,44981829,44987132,44995090,44997169,45000392,45001167,45024973,45075018	44966603,44972158,44978571,44981943,44987296,44995257,44997306,45000520,45001353,45025130,45079959	Gene ID= ENSG00000101109.11 TPM= 1.93 Transcript Type= protein_coding
chr20	45252239	45254564	45252239	45254564	-	ENST00000338380.2@SLPI	ENST00000338380.2	protein_coding	45254459,45253575,45253002,45252239	45254564,45253733,45253151,45252419	Gene ID= ENSG00000124107.5 TPM= 134.18 Transcript Type= protein_coding
chr20	45325288	45348430	45325288	45348430	-	transcript1669.chr20.nnic@SDC4	transcript1669.chr20.nnic	protein_coding	45348325,45335782,45333023,45330366,45326897,45325288	45348430,45335920,45333069,45330564,45327415,45325429	Gene ID= ENSG00000124145.6 TPM= 1.93 Transcript Type= NA
chr20	45325288	45348430	45325288	45348430	-	transcript1670.chr20.nnic@SDC4	transcript1670.chr20.nnic	protein_coding	45348325,45335782,45333023,45330366,45326808,45325288	45348430,45335920,45333069,45330564,45327415,45325488	Gene ID= ENSG00000124145.6 TPM= 1.93 Transcript Type= NA
chr20	45325292	45348430	45325292	45348430	-	transcript1673.chr20.nnic@SDC4	transcript1673.chr20.nnic	protein_coding	45348325,45335782,45333023,45330366,45326868,45325292	45348430,45335920,45333069,45330564,45327415,45326362	Gene ID= ENSG00000124145.6 TPM= 7.72 Transcript Type= NA
chr20	45325288	45348424	45325288	45348424	-	ENST00000372733.3@SDC4	ENST00000372733.3	protein_coding	45348325,45335782,45333023,45330366,45325288	45348424,45335920,45333069,45330564,45327415	Gene ID= ENSG00000124145.6 TPM= 389.02 Transcript Type= protein_coding
chr20	45363028	45369215	45363028	45369215	+	ENST00000243918.9@SYS1	ENST00000243918.9	protein_coding	45363028,45363529,45365619,45366875	45363315,45363693,45365686,45369215	Gene ID= ENSG00000204070.9 TPM= 105.22 Transcript Type= protein_coding
chr20	45363200	45410610	45363200	45410610	+	ENST00000419593.5@SYS1-DBNDD2	ENST00000419593.5	protein_coding	45363200,45363529,45365619,45408460,45408801,45409932	45363315,45363693,45365686,45408606,45408938,45410610	Gene ID= ENSG00000254806.5 TPM= 5.59 Transcript Type= nonsense_mediated_decay
chr20	45406057	45410610	45406057	45410610	+	ENST00000372723.7@DBNDD2	ENST00000372723.7	protein_coding	45406057,45408460,45408801,45409932	45406210,45408606,45408938,45410610	Gene ID= ENSG00000244274.7 TPM= 4.62 Transcript Type= protein_coding
chr20	45407207	45410610	45407207	45410610	+	ENST00000372712.6@DBNDD2	ENST00000372712.6	protein_coding	45407207,45408460,45408801,45409932	45407779,45408606,45408938,45410610	Gene ID= ENSG00000244274.7 TPM= 9.45 Transcript Type= protein_coding
chr20	45406619	45410610	45406619	45410610	+	ENST00000360981.8@DBNDD2	ENST00000360981.8	protein_coding	45406619,45408460,45408801,45409932	45406732,45408606,45408938,45410610	Gene ID= ENSG00000244274.7 TPM= 288.43 Transcript Type= protein_coding
chr20	45406588	45410610	45406588	45410610	+	ENST00000372717.5@DBNDD2	ENST00000372717.5	protein_coding	45406588,45408460,45408801,45409932	45406732,45408606,45409036,45410610	Gene ID= ENSG00000244274.7 TPM= 7.24 Transcript Type= protein_coding
chr20	45416067	45426244	45416067	45426244	+	ENST00000279036.11@PIGT	ENST00000279036.11	protein_coding	45416067,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426244	Gene ID= ENSG00000124155.17 TPM= 23.97 Transcript Type= protein_coding
chr20	45416133	45426241	45416133	45426241	+	transcript1706.chr20.nnic@PIGT	transcript1706.chr20.nnic	protein_coding	45416133,45416517,45418852,45419339,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426241	Gene ID= ENSG00000124155.17 TPM= 10.45 Transcript Type= NA
chr20	45416133	45426241	45416133	45426241	+	transcript1707.chr20.nnic@PIGT	transcript1707.chr20.nnic	protein_coding	45416133,45416517,45418852,45419375,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426241	Gene ID= ENSG00000124155.17 TPM= 7.24 Transcript Type= NA
chr20	45416133	45426241	45416133	45426241	+	transcript1709.chr20.nic@PIGT	transcript1709.chr20.nic	protein_coding	45416133,45416517,45418852,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574	45416343,45416694,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426241	Gene ID= ENSG00000124155.17 TPM= 6.59 Transcript Type= NA
chr20	45791937	45811427	45791937	45811427	+	ENST00000372622.7@DNTTIP1	ENST00000372622.7	protein_coding	45791937,45792677,45793921,45795345,45801074,45801402,45801999,45803333,45805146,45805306,45809114,45810885,45811057	45792109,45792747,45794017,45795443,45801142,45801458,45802057,45803378,45805204,45805366,45809185,45810940,45811427	Gene ID= ENSG00000101457.12 TPM= 106.18 Transcript Type= protein_coding
chr20	45823214	45827341	45823214	45827341	-	ENST00000372555.7@TNNC2	ENST00000372555.7	protein_coding	45827246,45824783,45824495,45824292,45823991,45823214	45827341,45824834,45824638,45824406,45824127,45823379	Gene ID= ENSG00000101470.9 TPM= 7779.44 Transcript Type= protein_coding
chr20	45823214	45827312	45823214	45827312	-	transcript1740.chr20.nnic@TNNC2	transcript1740.chr20.nnic	protein_coding	45827286,45823214	45827312,45823343	Gene ID= ENSG00000101470.9 TPM= 55.02 Transcript Type= NA
chr20	45833895	45841730	45833895	45841730	+	ENST00000372542.5@SNX21	ENST00000372542.5	protein_coding	45833895,45834959,45840639	45834468,45835116,45841730	Gene ID= ENSG00000124104.18 TPM= 6.27 Transcript Type= protein_coding
chr20	45833852	45841730	45833852	45841730	+	ENST00000491381.5@SNX21	ENST00000491381.5	protein_coding	45833852,45834201,45834959,45840639	45833940,45834468,45835116,45841730	Gene ID= ENSG00000124104.18 TPM= 3.38 Transcript Type= protein_coding
chr20	45841721	45857406	45841721	45857406	-	ENST00000217455.8@ACOT8	ENST00000217455.8	protein_coding	45857188,45855159,45848450,45844263,45843527,45841721	45857406,45855292,45848675,45844420,45843721,45841956	Gene ID= ENSG00000101473.16 TPM= 29.92 Transcript Type= protein_coding
chr20	45841726	45857389	45841726	45857389	-	ENST00000461272.5@ACOT8	ENST00000461272.5	protein_coding	45857188,45855159,45848450,45844263,45843527,45841726	45857389,45855292,45848675,45844420,45843772,45841956	Gene ID= ENSG00000101473.16 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr20	45857617	45879122	45857617	45879122	+	ENST00000255152.2@ZSWIM3	ENST00000255152.2	protein_coding	45857617,45876714	45857980,45879122	Gene ID= ENSG00000132801.6 TPM= 2.9 Transcript Type= protein_coding
chr20	45881241	45885265	45881241	45885265	+	ENST00000372520.1@ZSWIM1	ENST00000372520.1	protein_coding	45881241,45882533,45884985	45881261,45884398,45885265	Gene ID= ENSG00000168612.4 TPM= 1.93 Transcript Type= protein_coding
chr20	45888634	45891287	45888634	45891287	-	ENST00000372518.4@NEURL2	ENST00000372518.4	protein_coding	45890250,45888634	45891287,45888873	Gene ID= ENSG00000124257.6 TPM= 11.58 Transcript Type= protein_coding
chr20	45891341	45898820	45891341	45898820	+	ENST00000191018.9@CTSA	ENST00000191018.9	protein_coding	45891341,45891569,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891425,45891762,45892027,45892323,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820	Gene ID= ENSG00000064601.16 TPM= 15.93 Transcript Type= protein_coding
chr20	45891044	45898820	45891044	45898820	+	ENST00000372484.7@CTSA	ENST00000372484.7	protein_coding	45891044,45891569,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891379,45891762,45892027,45892323,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820	Gene ID= ENSG00000064601.16 TPM= 75.78 Transcript Type= protein_coding
chr20	45891322	45898820	45891322	45898820	+	ENST00000354880.9@CTSA	ENST00000354880.9	protein_coding	45891322,45891569,45891916,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891379,45891762,45892027,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820	Gene ID= ENSG00000064601.16 TPM= 12.23 Transcript Type= protein_coding
chr20	45891376	45898786	45891376	45898786	+	ENST00000372459.6@CTSA	ENST00000372459.6	protein_coding	45891376,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891762,45892027,45892323,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898786	Gene ID= ENSG00000064601.16 TPM= 2.25 Transcript Type= protein_coding
chr20	45898760	45912147	45898760	45912147	-	ENST00000372431.7@PLTP	ENST00000372431.7	protein_coding	45912079,45911353,45911152,45909942,45909516,45907841,45907692,45906268,45904942,45904800,45902440,45902267,45899836,45899622,45899462,45898760	45912147,45911463,45911251,45910070,45909671,45907904,45907755,45906359,45905118,45904859,45902604,45902334,45899878,45899685,45899538,45899063	Gene ID= ENSG00000100979.14 TPM= 32.82 Transcript Type= protein_coding
chr20	45933512	45935078	45933512	45935078	-	transcript1776.chr20.nnic@NA	transcript1776.chr20.nnic	NA	45933512	45935078	Gene ID= novel_gene_chr20_1777 TPM= 2.9 Transcript Type= NA
chr20	45934676	45948023	45934676	45948023	+	transcript1761.chr20.nnic@PCIF1	transcript1761.chr20.nnic	protein_coding	45934676,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944245,45944868,45945711,45946029,45946200,45947073,45947263,45947524	45934804,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45944320,45945030,45945883,45946115,45946384,45947166,45947438,45948023	Gene ID= ENSG00000100982.11 TPM= 7.65 Transcript Type= NA
chr20	45934674	45948023	45934674	45948023	+	transcript1762.chr20.nnic@PCIF1	transcript1762.chr20.nnic	protein_coding	45934674,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45946200,45947073,45947263,45947524	45935365,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45946384,45947166,45947438,45948023	Gene ID= ENSG00000100982.11 TPM= 10.86 Transcript Type= NA
chr20	45934628	45948023	45934628	45948023	+	ENST00000372409.7@PCIF1	ENST00000372409.7	protein_coding	45934628,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45946200,45947073,45947263,45947524	45934804,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45946384,45947166,45947438,45948023	Gene ID= ENSG00000100982.11 TPM= 59.61 Transcript Type= protein_coding
chr20	45934676	45948020	45934676	45948020	+	transcript1765.chr20.nnic@PCIF1	transcript1765.chr20.nnic	protein_coding	45934676,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45946200,45947073,45947263,45947576	45934804,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45946384,45947166,45947438,45948020	Gene ID= ENSG00000100982.11 TPM= 7.8 Transcript Type= NA
chr20	45934733	45937972	45934733	45937972	+	ENST00000616084.1@PCIF1	ENST00000616084.1	protein_coding	45934733,45937418	45934804,45937972	Gene ID= ENSG00000100982.11 TPM= 3.86 Transcript Type= processed_transcript
chr20	45948653	45972172	45948653	45972172	-	ENST00000322927.2@ZNF335	ENST00000322927.2	protein_coding	45972122,45971210,45969451,45968285,45967734,45967494,45965628,45963738,45963473,45962070,45960864,45960616,45960449,45960208,45959201,45957835,45957586,45953689,45952598,45952147,45950453,45950219,45949966,45949800,45949485,45949333,45949170,45948653	45972172,45971460,45969691,45968362,45968027,45967634,45965774,45963990,45963650,45962182,45960882,45960732,45960525,45960368,45959433,45957928,45957680,45953948,45952709,45952521,45950595,45950373,45950069,45949877,45949568,45949398,45949251,45949080	Gene ID= ENSG00000198026.7 TPM= 12.55 Transcript Type= protein_coding
chr20	46060985	46089952	46060985	46089952	-	ENST00000290231.10@NCOA5	ENST00000290231.10	protein_coding	46089817,46079387,46070210,46068502,46067055,46065029,46063360,46060985	46089952,46079453,46070536,46068638,46067181,46065228,46063680,46062889	Gene ID= ENSG00000124160.11 TPM= 14.16 Transcript Type= protein_coding
chr20	46060985	46089951	46060985	46089951	-	transcript1782.chr20.nic@NCOA5	transcript1782.chr20.nic	protein_coding	46089817,46070210,46068502,46067055,46065029,46063360,46060985	46089951,46070536,46068638,46067181,46065228,46063680,46062889	Gene ID= ENSG00000124160.11 TPM= 9.33 Transcript Type= NA
chr20	46060999	46089951	46060999	46089951	-	transcript1783.chr20.nic@NCOA5	transcript1783.chr20.nic	protein_coding	46089817,46070210,46068502,46067055,46065029,46060999	46089951,46070536,46068638,46067181,46065228,46063680	Gene ID= ENSG00000124160.11 TPM= 3.54 Transcript Type= NA
chr20	46118265	46129659	46118265	46129659	+	transcript1791.chr20.nnic@CD40	transcript1791.chr20.nnic	protein_coding	46118265,46122233,46122610,46126640,46128138,46128330,46128882	46118394,46122358,46122756,46126701,46128224,46128358,46129659	Gene ID= ENSG00000101017.13 TPM= 1.93 Transcript Type= NA
chr20	46349734	46364460	46349734	46364460	-	transcript1799.chr20.nic@SLC35C2	transcript1799.chr20.nic	protein_coding	46364371,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46349734	46364460,46358763,46357773,46356637,46355874,46355241,46354965,46352226,46350890	Gene ID= ENSG00000080189.14 TPM= 5.79 Transcript Type= NA
chr20	46366050	46406615	46366050	46406615	-	transcript1809.chr20.nnic@ELMO2	transcript1809.chr20.nnic	protein_coding	46406548,46399903,46398697,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406615,46399971,46398771,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 3.76 Transcript Type= NA
chr20	46366050	46406636	46366050	46406636	-	transcript1812.chr20.nic@ELMO2	transcript1812.chr20.nic	protein_coding	46406548,46398697,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406636,46398771,46394503,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 7.63 Transcript Type= NA
chr20	46366050	46406635	46366050	46406635	-	transcript1816.chr20.nic@ELMO2	transcript1816.chr20.nic	protein_coding	46406548,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406635,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 7.63 Transcript Type= NA
chr20	46366055	46406632	46366055	46406632	-	ENST00000396391.5@ELMO2	ENST00000396391.5	protein_coding	46406548,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366055	46406632,46394503,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 10.52 Transcript Type= protein_coding
chr20	46366049	46406617	46366049	46406617	-	ENST00000290246.10@ELMO2	ENST00000290246.10	protein_coding	46406548,46398697,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366049	46406617,46398771,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 36.39 Transcript Type= protein_coding
chr20	46366050	46406559	46366050	46406559	-	ENST00000372176.5@ELMO2	ENST00000372176.5	protein_coding	46406548,46398697,46394405,46393981,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406559,46398771,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 3.57 Transcript Type= protein_coding
chr20	46684365	46689779	46684365	46689779	-	ENST00000372114.3@TP53RK	ENST00000372114.3	protein_coding	46689132,46684365	46689779,46687231	Gene ID= ENSG00000172315.5 TPM= 4.83 Transcript Type= protein_coding
chr20	46709487	46736347	46709487	46736347	+	ENST00000359271.3@SLC2A10	ENST00000359271.3	protein_coding	46709487,46725041,46726864,46729353,46733756	46709740,46726324,46726986,46729488,46736347	Gene ID= ENSG00000197496.5 TPM= 2.9 Transcript Type= protein_coding
chr20	46894624	47188844	46894624	47188844	+	ENST00000327619.9@EYA2	ENST00000327619.9	protein_coding	46894624,46990001,47001428,47004942,47016181,47072185,47074158,47089239,47097085,47143059,47169139,47172707,47179798,47180815,47183291,47188053	46894987,46990119,47001473,47005084,47016297,47072252,47074335,47089381,47097168,47143148,47169197,47172867,47179912,47180936,47183391,47188844	Gene ID= ENSG00000064655.18 TPM= 4.83 Transcript Type= protein_coding
chr20	47210440	47319053	47210440	47319053	-	transcript1836.chr20.nic@ZMYND8	transcript1836.chr20.nic	protein_coding	47318951,47310056,47298729,47294666,47291796,47290187,47287229,47283571,47282102,47276314,47262288,47249287,47246008,47238896,47236326,47229726,47227203,47224317,47221314,47220258,47212642,47210440	47319053,47310204,47298872,47294779,47291888,47290274,47287284,47283648,47282217,47276795,47262428,47249439,47246517,47239138,47236516,47229806,47227281,47224556,47221474,47220324,47212725,47210897	Gene ID= ENSG00000101040.19 TPM= 3.86 Transcript Type= NA
chr20	47210247	47356720	47210247	47356720	-	ENST00000458360.6@ZMYND8	ENST00000458360.6	protein_coding	47356657,47347856,47310056,47298729,47294666,47291796,47290187,47287229,47283571,47282102,47276314,47262288,47249287,47246008,47236326,47229726,47227203,47224317,47221314,47220258,47210247	47356720,47347926,47310204,47298872,47294779,47291888,47290274,47287284,47283648,47282217,47276795,47262428,47249439,47246517,47236516,47229806,47227281,47224556,47221474,47220324,47210897	Gene ID= ENSG00000101040.19 TPM= 1.93 Transcript Type= protein_coding
chr20	47352561	47354633	47352561	47354633	+	ENST00000413818.2@AL031666.1	ENST00000413818.2	antisense_RNA	47352561,47353005	47352740,47354633	Gene ID= ENSG00000231119.2 TPM= 1.93 Transcript Type= antisense_RNA
chr20	47353697	47356344	47353697	47356344	+	transcript1845.chr20.nnic@NA	transcript1845.chr20.nnic	NA	47353697	47356344	Gene ID= novel_gene_chr20_1846 TPM= 1.93 Transcript Type= NA
chr20	47501902	47656877	47501902	47656877	+	ENST00000372004.7@NCOA3	ENST00000372004.7	protein_coding	47501902,47583183,47622229,47623911,47625381,47627002,47627561,47627922,47633496,47634048,47635322,47635891,47637648,47639008,47639577,47639925,47642213,47647073,47649005,47650982,47652406,47652931,47653406	47502019,47583261,47622330,47624083,47625481,47627176,47627749,47628023,47633636,47634195,47635713,47636762,47637783,47639202,47639822,47640051,47642384,47647366,47649097,47651276,47652580,47653072,47656877	Gene ID= ENSG00000124151.18 TPM= 9.65 Transcript Type= protein_coding
chr20	47628411	47630368	47628411	47630368	-	transcript1851.chr20.nnic@NA	transcript1851.chr20.nnic	NA	47628411	47630368	Gene ID= novel_gene_chr20_1852 TPM= 2.9 Transcript Type= NA
chr20	47657406	47785505	47657406	47785505	-	transcript1853.chr20.nic@SULF2	transcript1853.chr20.nic	protein_coding	47785343,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47657406	47785505,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659730,47659452,47658392	Gene ID= ENSG00000196562.14 TPM= 1.93 Transcript Type= NA
chr20	47656912	47786586	47656912	47786586	-	ENST00000359930.8@SULF2	ENST00000359930.8	protein_coding	47785835,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47656912	47786586,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659730,47659452,47658392	Gene ID= ENSG00000196562.14 TPM= 2.9 Transcript Type= protein_coding
chr20	48921890	49036693	48921890	49036693	+	ENST00000371917.4@ARFGEF2	ENST00000371917.4	protein_coding	48921890,48941199,48941864,48951323,48952705,48953556,48963830,48965872,48969147,48971120,48972326,48973145,48974766,48976016,48984729,48985408,48988304,48988491,48989285,48989556,48991040,48994451,48995783,48998193,48998336,49005070,49010232,49011924,49013564,49013831,49016280,49017249,49017496,49018884,49023051,49025313,49028530,49032049,49033023	48922010,48941229,48941987,48951469,48952884,48953790,48963898,48966023,48969277,48971354,48972425,48973284,48974874,48976199,48984840,48985613,48988388,48988662,48989436,48989684,48991198,48994598,48995882,48998233,48998505,49005221,49010404,49012084,49013694,49013960,49016415,49017387,49017550,49018998,49023181,49025481,49028668,49032166,49036693	Gene ID= ENSG00000124198.8 TPM= 9.65 Transcript Type= protein_coding
chr20	49046312	49096952	49046312	49096952	+	ENST00000262982.2@CSE1L	ENST00000262982.2	protein_coding	49046312,49058453,49063202,49066192,49066365,49067190,49068715,49070205,49072286,49072568,49074785,49075318,49076980,49078561,49084026,49085283,49088009,49089247,49089538,49090742,49090937,49092046,49094140,49094732,49096349	49046423,49058548,49063344,49066293,49066510,49067280,49068822,49070297,49072453,49072697,49074850,49075520,49077064,49078622,49084162,49085386,49088106,49089397,49089746,49090839,49091022,49092127,49094286,49094963,49096952	Gene ID= ENSG00000124207.16 TPM= 13.51 Transcript Type= protein_coding
chr20	49113339	49188367	49113339	49188367	-	ENST00000371856.6@STAU1	ENST00000371856.6	protein_coding	49188116,49174195,49165997,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113339	49188367,49174269,49166285,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 8.3 Transcript Type= protein_coding
chr20	49113523	49188367	49113523	49188367	-	ENST00000340954.11@STAU1	ENST00000340954.11	protein_coding	49188116,49179122,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523	49188367,49179244,49174269,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 5.09 Transcript Type= protein_coding
chr20	49113341	49188337	49113341	49188337	-	transcript1890.chr20.nnic@STAU1	transcript1890.chr20.nnic	protein_coding	49188116,49165997,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113341	49188337,49166285,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 7.02 Transcript Type= NA
chr20	49113341	49188367	49113341	49188367	-	ENST00000371828.7@STAU1	ENST00000371828.7	protein_coding	49188116,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113341	49188367,49174269,49154071,49151747,49135931,49124605,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 13.03 Transcript Type= protein_coding
chr20	49113523	49188367	49113523	49188367	-	ENST00000360426.8@STAU1	ENST00000360426.8	protein_coding	49188116,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523	49188367,49174269,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 15.06 Transcript Type= protein_coding
chr20	49113523	49188367	49113523	49188367	-	ENST00000347458.9@STAU1	ENST00000347458.9	protein_coding	49188116,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523	49188367,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 3.64 Transcript Type= protein_coding
chr20	49219355	49244075	49219355	49244075	+	transcript1902.chr20.nic@DDX27	transcript1902.chr20.nic	protein_coding	49219355,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49231023,49233306,49233568,49234935,49236150,49236333,49238949,49239236,49241893,49242083,49242594,49243629,49243816	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49231115,49233405,49233709,49235088,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49243703,49244075	Gene ID= ENSG00000124228.14 TPM= 13.37 Transcript Type= NA
chr20	49219355	49244075	49219355	49244075	+	transcript1907.chr20.nic@DDX27	transcript1907.chr20.nic	protein_coding	49219355,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49233306,49233568,49234935,49236333,49238949,49239236,49241893,49242083,49242594,49243629,49243816	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49233405,49233709,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49243703,49244075	Gene ID= ENSG00000124228.14 TPM= 3.72 Transcript Type= NA
chr20	49219347	49244077	49219347	49244077	+	ENST00000484427.5@DDX27	ENST00000484427.5	protein_coding	49219347,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49233306,49233568,49236333,49238949,49239236,49241893,49242083,49242594,49243629,49243816	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49233405,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49243703,49244077	Gene ID= ENSG00000124228.14 TPM= 2.03 Transcript Type= retained_intron
chr20	49219355	49241924	49219355	49241924	+	transcript1915.chr20.nic@DDX27	transcript1915.chr20.nic	protein_coding	49219355,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49233306,49233568,49234935,49236150,49236333,49238949,49239236,49241893	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49233405,49233709,49235088,49236231,49236510,49239055,49239338,49241924	Gene ID= ENSG00000124228.14 TPM= 12.4 Transcript Type= NA
chr20	49219416	49244070	49219416	49244070	+	ENST00000618172.4@DDX27	ENST00000618172.4	protein_coding	49219416,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49233306,49233568,49234935,49236150,49236333,49238949,49239236,49241893,49242083,49242594,49243629,49243816	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49233405,49233709,49235088,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49243703,49244070	Gene ID= ENSG00000124228.14 TPM= 69.12 Transcript Type= protein_coding
chr20	49255928	49278134	49255928	49278134	-	transcript1921.chr20.nic@ZNFX1	transcript1921.chr20.nic	protein_coding	49278021,49275779,49269942,49266135,49264716,49263334,49260463,49257417,49255928	49278134,49275887,49271750,49266266,49264864,49263483,49260577,49257664,49255947	Gene ID= ENSG00000124201.14 TPM= 10.62 Transcript Type= NA
chr20	49278178	49289260	49278178	49289260	+	ENST00000371743.7@ZFAS1	ENST00000371743.7	antisense_RNA	49278178,49279104,49280485,49280903,49289045	49278716,49279208,49280570,49280964,49289260	Gene ID= ENSG00000177410.12 TPM= 17.38 Transcript Type= antisense_RNA
chr20	49278178	49289260	49278178	49289260	+	ENST00000417721.5@ZFAS1	ENST00000417721.5	antisense_RNA	49278178,49279104,49289045	49278716,49279208,49289260	Gene ID= ENSG00000177410.12 TPM= 1.93 Transcript Type= antisense_RNA
chr20	49371968	49484297	49371968	49484297	-	ENST00000635465.1@KCNB1	ENST00000635465.1	protein_coding	49483942,49481914,49371968	49484297,49482646,49374992	Gene ID= ENSG00000158445.9 TPM= 6.76 Transcript Type= protein_coding
chr20	49632945	49713864	49632945	49713864	-	transcript1941.chr20.nnic@B4GALT5	transcript1941.chr20.nnic	protein_coding	49713576,49656568,49646965,49643526,49642468,49640478,49639678,49637341,49635777,49632945	49713864,49656702,49647078,49643650,49642584,49640665,49639800,49637442,49636459,49633296	Gene ID= ENSG00000158470.5 TPM= 1.93 Transcript Type= NA
chr20	49632945	49713878	49632945	49713878	-	ENST00000371711.4@B4GALT5	ENST00000371711.4	protein_coding	49713576,49656568,49646965,49643526,49642468,49640478,49639678,49637341,49632945	49713878,49656702,49647078,49643650,49642584,49640665,49639800,49637442,49636459	Gene ID= ENSG00000158470.5 TPM= 64.68 Transcript Type= protein_coding
chr20	49812713	49892241	49812713	49892241	+	ENST00000417961.5@SLC9A8	ENST00000417961.5	protein_coding	49812713,49815008,49823061,49839541,49845036,49849579,49850762,49855438,49862929,49864739,49874705,49877981,49880924,49883846,49886752,49887829	49812948,49815189,49823141,49839599,49845119,49849680,49850844,49855581,49863067,49864844,49874821,49878063,49881035,49884066,49886898,49892241	Gene ID= ENSG00000197818.11 TPM= 19.31 Transcript Type= protein_coding
chr20	49903391	49915508	49903391	49915508	-	ENST00000289431.9@SPATA2	ENST00000289431.9	protein_coding	49915380,49908155,49903391	49915508,49908592,49906845	Gene ID= ENSG00000158480.10 TPM= 18.34 Transcript Type= protein_coding
chr20	49936348	49953892	49936348	49953892	+	ENST00000244061.5@RNF114	ENST00000244061.5	protein_coding	49936348,49941561,49945382,49946136,49949248,49952076	49936552,49941711,49945488,49946250,49949355,49953892	Gene ID= ENSG00000124226.10 TPM= 142.87 Transcript Type= protein_coding
chr20	49936401	49939764	49936401	49939764	+	transcript1972.chr20.nnic@NA	transcript1972.chr20.nnic	NA	49936401	49939764	Gene ID= novel_gene_chr20_1973 TPM= 6.76 Transcript Type= NA
chr20	50081124	50113172	50081124	50113172	-	ENST00000396059.7@UBE2V1	ENST00000396059.7	protein_coding	50113107,50084129,50081124	50113172,50084254,50082914	Gene ID= ENSG00000244687.11 TPM= 6.27 Transcript Type= processed_transcript
chr20	50095415	50113136	50095415	50113136	-	transcript1988.chr20.nic@UBE2V1	transcript1988.chr20.nic	protein_coding	50113107,50095415	50113136,50096820	Gene ID= ENSG00000244687.11 TPM= 1.93 Transcript Type= NA
chr20	50096584	50113194	50096584	50113194	-	transcript1989.chr20.nic@UBE2V1	transcript1989.chr20.nic	protein_coding	50113107,50096584	50113194,50096820	Gene ID= ENSG00000244687.11 TPM= 1.93 Transcript Type= NA
chr20	50081124	50113173	50081124	50113173	-	ENST00000371674.7@UBE2V1	ENST00000371674.7	protein_coding	50113107,50096672,50084129,50081124	50113173,50096820,50084254,50082914	Gene ID= ENSG00000244687.11 TPM= 16.89 Transcript Type= protein_coding
chr20	50124044	50153734	50124044	50153734	-	ENST00000453505.6@TMEM189	ENST00000453505.6	protein_coding	50153517,50151212,50143502,50130856,50129546,50127975,50124044	50153734,50151315,50143621,50130947,50129690,50128187,50125179	Gene ID= ENSG00000240849.10 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr20	50118254	50153734	50118254	50153734	-	ENST00000371652.8@TMEM189	ENST00000371652.8	protein_coding	50153517,50143502,50130856,50129546,50127975,50118254	50153734,50143621,50130947,50129690,50128187,50125179	Gene ID= ENSG00000240849.10 TPM= 17.38 Transcript Type= protein_coding
chr20	50123737	50153734	50123737	50153734	-	ENST00000371650.9@TMEM189	ENST00000371650.9	protein_coding	50153517,50143502,50130865,50129546,50127975,50123737	50153734,50143621,50130947,50129690,50128187,50125179	Gene ID= ENSG00000240849.10 TPM= 30.89 Transcript Type= protein_coding
chr20	50139681	50142552	50139681	50142552	-	transcript1996.chr20.nnic@NA	transcript1996.chr20.nnic	NA	50139681	50142552	Gene ID= novel_gene_chr20_1997 TPM= 1.93 Transcript Type= NA
chr20	50190830	50192582	50190830	50192582	+	transcript2005.chr20.nnic@CEBPB	transcript2005.chr20.nnic	protein_coding	50190830,50192368	50192209,50192582	Gene ID= ENSG00000172216.5 TPM= 12.79 Transcript Type= NA
chr20	50190830	50192668	50190830	50192668	+	transcript2006.chr20.nnic@CEBPB	transcript2006.chr20.nnic	protein_coding	50190830,50192368	50192209,50192668	Gene ID= ENSG00000172216.5 TPM= 12.79 Transcript Type= NA
chr20	50191048	50192583	50191048	50192583	+	transcript2007.chr20.nnic@CEBPB	transcript2007.chr20.nnic	protein_coding	50191048,50191589	50191415,50192583	Gene ID= ENSG00000172216.5 TPM= 3.14 Transcript Type= NA
chr20	50190734	50192689	50190734	50192689	+	ENST00000303004.4@CEBPB	ENST00000303004.4	protein_coding	50190734	50192689	Gene ID= ENSG00000172216.5 TPM= 1026.37 Transcript Type= protein_coding
chr20	50193230	50196052	50193230	50196052	+	transcript2015.chr20.nnic@NA	transcript2015.chr20.nnic	NA	50193230	50196052	Gene ID= novel_gene_chr20_2016 TPM= 2.9 Transcript Type= NA
chr20	50510349	50583403	50510349	50583403	+	transcript2027.chr20.nic@PTPN1	transcript2027.chr20.nic	protein_coding	50510349,50561363,50564969,50568380,50574517,50578420,50579168,50579703,50581265	50510590,50561453,50565069,50568478,50574654,50578629,50579329,50579926,50583403	Gene ID= ENSG00000196396.9 TPM= 5.55 Transcript Type= NA
chr20	50510413	50583637	50510413	50583637	+	transcript2029.chr20.nnic@PTPN1	transcript2029.chr20.nnic	protein_coding	50510413,50561363,50564969,50568380,50574517,50579168,50579703,50581265,50582692	50510590,50561453,50565069,50568478,50574654,50579329,50579926,50581460,50583637	Gene ID= ENSG00000196396.9 TPM= 4.1 Transcript Type= NA
chr20	50510412	50576726	50510412	50576726	+	transcript2032.chr20.nic@PTPN1	transcript2032.chr20.nic	protein_coding	50510412,50561363,50564969,50568380,50574517	50510590,50561453,50565069,50568478,50576726	Gene ID= ENSG00000196396.9 TPM= 2.17 Transcript Type= NA
chr20	50890354	50931430	50890354	50931430	-	transcript2041.chr20.nnic@ADNP	transcript2041.chr20.nnic	protein_coding	50930826,50902017,50890354	50931430,50902109,50894512	Gene ID= ENSG00000101126.15 TPM= 16.41 Transcript Type= NA
chr20	50934867	50958555	50934867	50958555	-	ENST00000371582.8@DPM1	ENST00000371582.8	protein_coding	50958363,50955186,50948629,50945847,50945737,50942031,50941129,50940865,50936148,50934867	50958555,50955285,50948662,50945923,50945762,50942126,50941209,50940933,50936262,50935236	Gene ID= ENSG00000000419.12 TPM= 1.45 Transcript Type= protein_coding
chr20	50934867	50958550	50934867	50958550	-	ENST00000371588.9@DPM1	ENST00000371588.9	protein_coding	50958363,50955186,50948629,50945847,50945737,50942031,50940865,50936148,50934867	50958550,50955285,50948662,50945923,50945762,50942126,50940933,50936262,50935236	Gene ID= ENSG00000000419.12 TPM= 41.99 Transcript Type= protein_coding
chr20	50934867	50958550	50934867	50958550	-	transcript2048.chr20.nnic@DPM1	transcript2048.chr20.nnic	protein_coding	50958363,50955186,50948629,50945847,50945737,50942031,50936148,50934867	50958550,50955285,50948662,50945923,50945762,50942126,50936262,50935236	Gene ID= ENSG00000000419.12 TPM= 1.93 Transcript Type= NA
chr20	50958811	50961088	50958811	50961088	+	transcript2049.chr20.nnic@NA	transcript2049.chr20.nnic	NA	50958811	50961088	Gene ID= novel_gene_chr20_2050 TPM= 18.34 Transcript Type= NA
chr20	52151278	52191986	52151278	52191986	-	ENST00000216923.4@ZFP64	ENST00000216923.4	protein_coding	52191591,52186832,52165864,52164695,52160123,52151278	52191986,52187071,52166025,52164757,52160374,52153428	Gene ID= ENSG00000020256.19 TPM= 3.86 Transcript Type= protein_coding
chr20	52151278	52191760	52151278	52191760	-	ENST00000346617.8@ZFP64	ENST00000346617.8	protein_coding	52191591,52186832,52164695,52160123,52151278	52191760,52187071,52164757,52160374,52153428	Gene ID= ENSG00000020256.19 TPM= 2.9 Transcript Type= protein_coding
chr20	54207847	54219953	54207847	54219953	+	ENST00000371419.6@PFDN4	ENST00000371419.6	protein_coding	54207847,54214351,54215300,54219019	54208124,54214458,54215440,54219953	Gene ID= ENSG00000101132.9 TPM= 2.9 Transcript Type= protein_coding
chr20	54475988	54651171	54475988	54651171	+	transcript2073.chr20.nnic@DOK5	transcript2073.chr20.nnic	protein_coding	54475988,54554933,54588483,54588687,54591616,54610388,54643458,54650415	54476185,54555040,54588597,54588806,54591805,54610523,54643578,54651171	Gene ID= ENSG00000101134.11 TPM= 1.93 Transcript Type= NA
chr20	54475677	54614734	54475677	54614734	+	transcript2077.chr20.nic@DOK5	transcript2077.chr20.nic	protein_coding	54475677,54554933,54588483,54588687,54591616,54610388	54476012,54555040,54588597,54588806,54591805,54614734	Gene ID= ENSG00000101134.11 TPM= 1.93 Transcript Type= NA
chr20	54475626	54495154	54475626	54495154	+	ENST00000491469.1@DOK5	ENST00000491469.1	protein_coding	54475626,54494800	54476012,54495154	Gene ID= ENSG00000101134.11 TPM= 6.76 Transcript Type= processed_transcript
chr20	54475597	54651171	54475597	54651171	+	ENST00000262593.9@DOK5	ENST00000262593.9	protein_coding	54475597,54554933,54588483,54588687,54591616,54610388,54643458,54650415	54476012,54555040,54588597,54588806,54591805,54610523,54643578,54651171	Gene ID= ENSG00000101134.11 TPM= 53.09 Transcript Type= protein_coding
chr20	56358915	56368663	56358915	56368663	+	ENST00000371384.3@FAM210B	ENST00000371384.3	protein_coding	56358915,56365087,56366071	56359191,56365262,56368663	Gene ID= ENSG00000124098.9 TPM= 13.51 Transcript Type= protein_coding
chr20	56392394	56406369	56392394	56406369	+	ENST00000217109.8@CSTF1	ENST00000217109.8	protein_coding	56392394,56395521,56397207,56397644,56398967,56403468	56392713,56395721,56397484,56397841,56399357,56406369	Gene ID= ENSG00000101138.11 TPM= 11.58 Transcript Type= protein_coding
chr20	56392637	56404260	56392637	56404260	+	transcript2100.chr20.nnic@CSTF1	transcript2100.chr20.nnic	protein_coding	56392637,56395521,56397207,56397644,56398967,56403468	56393917,56395721,56397484,56397841,56399357,56404260	Gene ID= ENSG00000101138.11 TPM= 1.93 Transcript Type= NA
chr20	56468585	56518886	56468585	56518886	+	ENST00000023939.8@RTFDC1	ENST00000023939.8	protein_coding	56468585,56472326,56473301,56474678,56476985,56484111,56513315,56516935,56517106,56518087	56468766,56472415,56473395,56474771,56477124,56484189,56513428,56516989,56517201,56518886	Gene ID= ENSG00000022277.12 TPM= 4.42 Transcript Type= protein_coding
chr20	56468591	56519449	56468591	56519449	+	ENST00000357348.9@RTFDC1	ENST00000357348.9	protein_coding	56468591,56473301,56474678,56476985,56484111,56513315,56516935,56517106,56518087	56468766,56473395,56474771,56477124,56484189,56513428,56516989,56517201,56519449	Gene ID= ENSG00000022277.12 TPM= 217.92 Transcript Type= protein_coding
chr20	56468614	56518887	56468614	56518887	+	ENST00000395881.7@RTFDC1	ENST00000395881.7	protein_coding	56468614,56473301,56474678,56476985,56484111,56513315,56517106,56518087	56468766,56473395,56474771,56477124,56484189,56513428,56517201,56518887	Gene ID= ENSG00000022277.12 TPM= 1.53 Transcript Type= protein_coding
chr20	57351010	57379211	57351010	57379211	+	ENST00000395841.6@RAE1	ENST00000395841.6	protein_coding	57351010,57354032,57354712,57356446,57365356,57366807,57367008,57368705,57373475,57373663,57374607,57378013	57351422,57354128,57354816,57356538,57365442,57366893,57367079,57368812,57373581,57373738,57374801,57379211	Gene ID= ENSG00000101146.12 TPM= 43.44 Transcript Type= protein_coding
chr20	57351223	57379211	57351223	57379211	+	ENST00000371242.6@RAE1	ENST00000371242.6	protein_coding	57351223,57354032,57354712,57356446,57365356,57366807,57367008,57368705,57373475,57373663,57374607,57378013	57351358,57354128,57354816,57356538,57365442,57366893,57367079,57368812,57373581,57373738,57374801,57379211	Gene ID= ENSG00000101146.12 TPM= 2.9 Transcript Type= protein_coding
chr20	57391398	57409333	57391398	57409333	+	transcript2122.chr20.nnic@RBM38	transcript2122.chr20.nnic	protein_coding	57391398,57392654,57393279,57407543	57391795,57392777,57393333,57409333	Gene ID= ENSG00000132819.16 TPM= 37.65 Transcript Type= NA
chr20	57391407	57409333	57391407	57409333	+	ENST00000356208.9@RBM38	ENST00000356208.9	protein_coding	57391407,57392654,57393279,57407543	57391818,57392777,57393333,57409333	Gene ID= ENSG00000132819.16 TPM= 245.19 Transcript Type= protein_coding
chr20	57710183	57712780	57710183	57712780	+	ENST00000614771.1@NKILA	ENST00000614771.1	antisense_RNA	57710183	57712780	Gene ID= ENSG00000278709.1 TPM= 1.93 Transcript Type= antisense_RNA
chr20	58309696	58367507	58309696	58367507	+	ENST00000244040.3@RAB22A	ENST00000244040.3	protein_coding	58309696,58311043,58343718,58353273,58353432,58354156,58359606	58310012,58311122,58343799,58353344,58353538,58354265,58367507	Gene ID= ENSG00000124209.3 TPM= 28.96 Transcript Type= protein_coding
chr20	58389122	58451101	58389122	58451101	+	ENST00000475243.5@VAPB	ENST00000475243.5	protein_coding	58389122,58418211,58434602,58438945,58440907,58444077	58389517,58418363,58434705,58439025,58441083,58451101	Gene ID= ENSG00000124164.15 TPM= 198.85 Transcript Type= protein_coding
chr20	58389233	58445552	58389233	58445552	+	transcript2144.chr20.nnic@VAPB	transcript2144.chr20.nnic	protein_coding	58389233,58418211,58434602,58440907,58444077	58389517,58418363,58434705,58441083,58445552	Gene ID= ENSG00000124164.15 TPM= 12.55 Transcript Type= NA
chr20	58692613	58715844	58692613	58715844	+	ENST00000356091.10@NPEPL1	ENST00000356091.10	protein_coding	58692613,58693737,58694422,58698684,58699197,58701016,58707123,58712479,58713420,58713917,58714560,58715168	58693050,58693922,58694592,58698773,58699278,58701158,58707200,58712579,58713543,58714093,58714670,58715844	Gene ID= ENSG00000215440.11 TPM= 130.32 Transcript Type= protein_coding
chr20	58852714	58911192	58852714	58911192	+	ENST00000371100.8@GNAS	ENST00000371100.8	protein_coding	58852714,58895612,58898941,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58855333,58895684,58898985,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192	Gene ID= ENSG00000087460.24 TPM= 4.16 Transcript Type= protein_coding
chr20	58889100	58911192	58889100	58911192	+	ENST00000477931.5@GNAS	ENST00000477931.5	protein_coding	58889100,58895612,58898941,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58889353,58895684,58898985,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192	Gene ID= ENSG00000087460.24 TPM= 26.63 Transcript Type= processed_transcript
chr20	58889171	58911179	58889171	58911179	+	ENST00000480975.5@GNAS	ENST00000480975.5	protein_coding	58889171,58895612,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58889353,58895684,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911179	Gene ID= ENSG00000087460.24 TPM= 37.57 Transcript Type= processed_transcript
chr20	58891303	58911192	58891303	58911192	+	ENST00000371085.7@GNAS	ENST00000371085.7	protein_coding	58891303,58895612,58898941,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58891865,58895684,58898985,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192	Gene ID= ENSG00000087460.24 TPM= 968.98 Transcript Type= protein_coding
chr20	58891364	58911192	58891364	58911192	+	ENST00000265620.11@GNAS	ENST00000265620.11	protein_coding	58891364,58895612,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58891865,58895684,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192	Gene ID= ENSG00000087460.24 TPM= 1208.64 Transcript Type= protein_coding
chr20	58981208	58995133	58981208	58995133	+	transcript2279.chr20.nic@NELFCD	transcript2279.chr20.nic	protein_coding	58981208,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642	58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58993675,58994239,58995133	Gene ID= ENSG00000101158.13 TPM= 7.72 Transcript Type= NA
chr20	58981208	58995133	58981208	58995133	+	ENST00000602795.5@NELFCD	ENST00000602795.5	protein_coding	58981208,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642	58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58993764,58994239,58995133	Gene ID= ENSG00000101158.13 TPM= 38.61 Transcript Type= protein_coding
chr20	58981276	58995133	58981276	58995133	+	transcript2281.chr20.nic@NELFCD	transcript2281.chr20.nic	protein_coding	58981276,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642	58981369,58986208,58986863,58987817,58989021,58989640,58990232,58991075,58991446,58992020,58993112,58993544,58993675,58994239,58995133	Gene ID= ENSG00000101158.13 TPM= 2.9 Transcript Type= NA
chr20	58981275	58995133	58981275	58995133	+	ENST00000460601.5@NELFCD	ENST00000460601.5	protein_coding	58981275,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642,58994926	58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58993764,58994239,58994824,58995133	Gene ID= ENSG00000101158.13 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr20	59025467	59032382	59025467	59032382	-	ENST00000243997.7@ATP5E	ENST00000243997.7	protein_coding	59032220,59030303,59025467	59032382,59030429,59028841	Gene ID= ENSG00000124172.9 TPM= 483.62 Transcript Type= protein_coding
chr20	59028678	59032345	59028678	59032345	-	ENST00000395659.1@ATP5E	ENST00000395659.1	protein_coding	59032220,59028678	59032345,59030429	Gene ID= ENSG00000124172.9 TPM= 1.93 Transcript Type= protein_coding
chr20	59033145	59042909	59033145	59042909	-	ENST00000355937.8@PRELID3B	ENST00000355937.8	protein_coding	59042699,59038466,59037191,59036690,59036471,59033145	59042909,59038634,59037280,59036760,59036573,59035126	Gene ID= ENSG00000101166.15 TPM= 47.3 Transcript Type= protein_coding
chr20	59936835	59940299	59936835	59940299	-	transcript2308.chr20.nnic@NA	transcript2308.chr20.nnic	NA	59936835	59940299	Gene ID= novel_gene_chr20_2309 TPM= 15.44 Transcript Type= NA
chr20	62003294	62064936	62003294	62064936	-	transcript2314.chr20.nic@TAF4	transcript2314.chr20.nic	protein_coding	62064451,62014547,62012815,62010046,62009052,62007547,62006510,62003294	62064936,62014707,62012934,62010165,62009174,62007636,62006758,62003878	Gene ID= ENSG00000130699.18 TPM= 1.93 Transcript Type= NA
chr20	62066494	62067503	62066494	62067503	+	transcript2318.chr20.nnic@NA	transcript2318.chr20.nnic	NA	62066494	62067503	Gene ID= novel_gene_chr20_2319 TPM= 1.93 Transcript Type= NA
chr20	62119083	62121686	62119083	62121686	-	transcript2320.chr20.nnic@NA	transcript2320.chr20.nnic	NA	62119083	62121686	Gene ID= novel_gene_chr20_2321 TPM= 1.93 Transcript Type= NA
chr20	62122408	62134459	62122408	62134459	+	transcript2322.chr20.nic@LSM14B	transcript2322.chr20.nic	protein_coding	62122408,62124617,62126304,62127585,62129785,62130219,62130530,62131356,62133290,62134163	62122793,62124780,62126439,62127701,62129952,62130296,62130691,62131506,62133475,62134459	Gene ID= ENSG00000149657.19 TPM= 6.76 Transcript Type= NA
chr20	62136735	62143430	62136735	62143430	-	ENST00000370873.8@PSMA7	ENST00000370873.8	protein_coding	62143208,62140818,62139781,62139075,62138171,62137364,62136735	62143430,62140944,62139905,62139197,62138290,62137426,62136949	Gene ID= ENSG00000101182.14 TPM= 740.39 Transcript Type= protein_coding
chr20	62183023	62203568	62183023	62203568	+	transcript2347.chr20.nic@MTG2	transcript2347.chr20.nic	protein_coding	62183023,62193416,62195802,62197852,62198634,62199119,62200683,62203084	62183057,62193624,62195949,62197967,62198852,62199257,62202843,62203568	Gene ID= ENSG00000101181.17 TPM= 17.38 Transcript Type= NA
chr20	62183011	62203568	62183011	62203568	+	transcript2349.chr20.nnic@MTG2	transcript2349.chr20.nnic	protein_coding	62183011,62195802,62197852,62198634,62199119,62200683,62203084	62183057,62195949,62197967,62198852,62199257,62202843,62203568	Gene ID= ENSG00000101181.17 TPM= 15.44 Transcript Type= NA
chr20	62188831	62188991	62188831	62188991	+	transcript2361.chr20.nnic@NA	transcript2361.chr20.nnic	NA	62188831	62188991	Gene ID= novel_gene_chr20_2362 TPM= 3.86 Transcript Type= NA
chr20	62238485	62296212	62238485	62296212	+	ENST00000313733.7@OSBPL2	ENST00000313733.7	protein_coding	62238485,62256057,62259981,62263616,62272125,62273309,62279157,62281058,62281790,62284046,62286583,62289207,62291703,62293785	62238597,62256221,62260125,62263691,62272259,62273406,62279339,62281165,62281879,62284169,62286711,62289330,62291793,62296212	Gene ID= ENSG00000130703.15 TPM= 12.55 Transcript Type= protein_coding
chr20	62302093	62308862	62302093	62308862	+	ENST00000491935.5@ADRM1	ENST00000491935.5	protein_coding	62302093,62302896,62303568,62304461,62306197,62306648,62307371,62307596,62308021,62308368,62308655	62302142,62303049,62303781,62304577,62306320,62306734,62307452,62307828,62308178,62308470,62308862	Gene ID= ENSG00000130706.12 TPM= 1023.23 Transcript Type= protein_coding
chr20	62385589	62386987	62385589	62386987	-	transcript2396.chr20.nnic@NA	transcript2396.chr20.nnic	NA	62385589	62386987	Gene ID= novel_gene_chr20_2397 TPM= 1.93 Transcript Type= NA
chr20	62386303	62386970	62386303	62386970	-	ENST00000610979.1@AL121832.2	ENST00000610979.1	antisense_RNA	62386303	62386970	Gene ID= ENSG00000273619.1 TPM= 2.9 Transcript Type= antisense_RNA
chr20	62387116	62388519	62387116	62388519	+	ENST00000343986.8@RPS21	ENST00000343986.8	protein_coding	62387116,62387321,62387611,62387843,62388309,62388457	62387136,62387388,62387674,62387914,62388364,62388519	Gene ID= ENSG00000171858.17 TPM= 281.39 Transcript Type= protein_coding
chr20	62387123	62388519	62387123	62388519	+	ENST00000492356.2@RPS21	ENST00000492356.2	protein_coding	62387123,62387321,62387611,62387843,62388309	62387136,62387388,62387674,62387914,62388519	Gene ID= ENSG00000171858.17 TPM= 4.34 Transcript Type= processed_transcript
chr20	62388632	62407285	62388632	62407285	-	ENST00000279101.9@CABLES2	ENST00000279101.9	protein_coding	62406915,62396521,62396315,62394937,62394157,62393440,62392920,62392389,62391249,62388632	62407285,62396592,62396407,62395014,62394265,62393605,62393023,62392495,62391453,62391111	Gene ID= ENSG00000149679.11 TPM= 5.79 Transcript Type= protein_coding
chr20	62550451	62570764	62550451	62570764	+	transcript2408.chr20.nnic@MIR1-1HG	transcript2408.chr20.nnic	antisense_RNA	62550451,62550873,62553465,62564989,62570444	62550679,62551038,62553665,62565100,62570764	Gene ID= ENSG00000174407.13 TPM= 45.83 Transcript Type= NA
chr20	62550453	62570764	62550453	62570764	+	transcript2413.chr20.nnic@MIR1-1HG	transcript2413.chr20.nnic	antisense_RNA	62550453,62550873,62553465,62564989,62570444	62550491,62551038,62553665,62565100,62570764	Gene ID= ENSG00000174407.13 TPM= 31.35 Transcript Type= NA
chr20	62550453	62570764	62550453	62570764	+	transcript2416.chr20.nnic@MIR1-1HG	transcript2416.chr20.nnic	antisense_RNA	62550453,62551953,62553465,62564989,62570444	62551038,62552178,62553665,62565100,62570764	Gene ID= ENSG00000174407.13 TPM= 12.04 Transcript Type= NA
chr20	62550448	62570764	62550448	62570764	+	transcript2430.chr20.nnic@MIR1-1HG	transcript2430.chr20.nnic	antisense_RNA	62550448,62553465,62565030,62570444	62551038,62553665,62565100,62570764	Gene ID= ENSG00000174407.13 TPM= 30.54 Transcript Type= NA
chr20	62550453	62570764	62550453	62570764	+	ENST00000624914.3@MIR1-1HG	ENST00000624914.3	antisense_RNA	62550453,62553465,62564989,62570444	62551038,62553665,62565100,62570764	Gene ID= ENSG00000174407.13 TPM= 224.13 Transcript Type= antisense_RNA
chr20	62550448	62570764	62550448	62570764	+	transcript2443.chr20.nic@MIR1-1HG	transcript2443.chr20.nic	antisense_RNA	62550448,62553465,62570444	62551038,62553665,62570764	Gene ID= ENSG00000174407.13 TPM= 24.07 Transcript Type= NA
chr20	62550453	62552230	62550453	62552230	+	transcript2454.chr20.nnic@NA	transcript2454.chr20.nnic	NA	62550453	62552230	Gene ID= novel_gene_chr20_2455 TPM= 12.55 Transcript Type= NA
chr20	62555039	62557456	62555039	62557456	+	transcript2456.chr20.nnic@NA	transcript2456.chr20.nnic	NA	62555039	62557456	Gene ID= novel_gene_chr20_2457 TPM= 2.9 Transcript Type= NA
chr20	62558059	62562465	62558059	62562465	+	transcript2450.chr20.nnic@NA	transcript2450.chr20.nnic	NA	62558059	62562465	Gene ID= novel_gene_chr20_2451 TPM= 27.99 Transcript Type= NA
chr20	62565331	62570757	62565331	62570757	+	transcript2452.chr20.nnic@NA	transcript2452.chr20.nnic	NA	62565331	62570757	Gene ID= novel_gene_chr20_2453 TPM= 41.51 Transcript Type= NA
chr20	62642445	62672295	62642445	62672295	+	ENST00000217159.5@SLCO4A1	ENST00000217159.5	protein_coding	62642445,62656359,62658677,62660412,62661064,62664934,62666380,62667745,62668012,62668477,62668930,62671750	62642553,62657250,62658767,62660533,62661175,62665088,62666575,62667910,62668184,62668541,62669078,62672295	Gene ID= ENSG00000101187.15 TPM= 16.89 Transcript Type= protein_coding
chr20	62642520	62672293	62642520	62672293	+	ENST00000497209.5@SLCO4A1	ENST00000497209.5	protein_coding	62642520,62656359,62658677,62660412,62661064,62664934,62666380,62667745,62668930,62671750	62642553,62657250,62658767,62660533,62661175,62665088,62666575,62668541,62669078,62672293	Gene ID= ENSG00000101187.15 TPM= 3.38 Transcript Type= nonsense_mediated_decay
chr20	62648961	62650767	62648961	62650767	-	ENST00000617703.1@AL357033.4	ENST00000617703.1	antisense_RNA	62648961	62650767	Gene ID= ENSG00000277496.1 TPM= 2.9 Transcript Type= antisense_RNA
chr20	62796418	62800588	62796418	62800588	+	transcript2464.chr20.nnic@MRGBP	transcript2464.chr20.nnic	protein_coding	62796418,62797110,62798587,62798853,62799456	62796671,62797231,62798668,62799049,62800588	Gene ID= ENSG00000101189.6 TPM= 6.27 Transcript Type= NA
chr20	62796418	62800588	62796418	62800588	+	transcript2470.chr20.nic@MRGBP	transcript2470.chr20.nic	protein_coding	62796418,62797110,62798587,62799456	62796671,62797231,62799049,62800588	Gene ID= ENSG00000101189.6 TPM= 3.38 Transcript Type= NA
chr20	62804817	62806574	62804817	62806574	+	transcript2473.chr20.nnic@NA	transcript2473.chr20.nnic	NA	62804817	62806574	Gene ID= novel_gene_chr20_2474 TPM= 1.93 Transcript Type= NA
chr20	62804835	62814000	62804835	62814000	+	ENST00000290291.10@OGFR	ENST00000290291.10	protein_coding	62804835,62807537,62808247,62809585,62810499,62811462,62812230	62805030,62807605,62808325,62809663,62810565,62811610,62814000	Gene ID= ENSG00000060491.16 TPM= 83.98 Transcript Type= protein_coding
chr20	62851490	62861783	62851490	62861783	-	transcript2479.chr20.nnic@TCFL5	transcript2479.chr20.nnic	protein_coding	62860830,62860125,62859364,62857395,62854016,62851490	62861783,62860308,62859526,62857638,62854157,62852888	Gene ID= ENSG00000101190.12 TPM= 1.93 Transcript Type= NA
chr20	62851490	62861840	62851490	62861840	-	transcript2480.chr20.nnic@TCFL5	transcript2480.chr20.nnic	protein_coding	62861024,62860125,62859364,62857395,62854016,62851490	62861840,62860308,62859526,62857638,62854157,62852888	Gene ID= ENSG00000101190.12 TPM= 6.76 Transcript Type= NA
chr20	62905003	62926478	62905003	62926478	-	transcript2483.chr20.nnic@DIDO1	transcript2483.chr20.nnic	protein_coding	62926432,62914210,62910774,62909699,62909051,62907147,62905003	62926478,62914406,62911614,62910020,62909158,62907359,62906100	Gene ID= ENSG00000101191.16 TPM= 4.51 Transcript Type= NA
chr20	62905642	62937903	62905642	62937903	-	transcript2485.chr20.nnic@DIDO1	transcript2485.chr20.nnic	protein_coding	62937796,62914210,62910774,62909699,62909051,62907147,62905642	62937903,62914406,62911614,62910020,62909158,62907359,62906100	Gene ID= ENSG00000101191.16 TPM= 1.93 Transcript Type= NA
chr20	62904998	62937952	62904998	62937952	-	ENST00000370371.8@DIDO1	ENST00000370371.8	protein_coding	62937796,62914210,62910774,62909699,62907147,62904998	62937952,62914406,62911614,62910020,62907359,62906100	Gene ID= ENSG00000101191.16 TPM= 13.2 Transcript Type= protein_coding
chr20	62905005	62926469	62905005	62926469	-	ENST00000354665.8@DIDO1	ENST00000354665.8	protein_coding	62926432,62914210,62910774,62909699,62907147,62905005	62926469,62914406,62911614,62910020,62907359,62906100	Gene ID= ENSG00000101191.16 TPM= 10.3 Transcript Type= protein_coding
chr20	62878986	62882287	62878986	62882287	-	transcript2495.chr20.nnic@NA	transcript2495.chr20.nnic	NA	62878986	62882287	Gene ID= novel_gene_chr20_2496 TPM= 4.83 Transcript Type= NA
chr20	62938121	62945644	62938121	62945644	+	transcript2497.chr20.nnic@GID8	transcript2497.chr20.nnic	protein_coding	62938121,62941491,62942965,62943495,62944739	62938253,62941620,62943183,62943692,62945644	Gene ID= ENSG00000101193.7 TPM= 3.86 Transcript Type= NA
chr20	62938119	62948475	62938119	62948475	+	ENST00000266069.4@GID8	ENST00000266069.4	protein_coding	62938119,62941491,62942987,62943495,62944739	62938253,62941620,62943183,62943692,62948475	Gene ID= ENSG00000101193.7 TPM= 12.55 Transcript Type= protein_coding
chr20	62952647	62969585	62952647	62969585	+	ENST00000370351.8@SLC17A9	ENST00000370351.8	protein_coding	62952647,62956765,62957441,62960504,62962624,62963273,62963584,62964228,62965132,62965610,62966525,62966703,62967337	62952889,62956962,62957580,62960603,62962754,62963369,62963680,62964315,62965166,62965725,62966580,62966732,62969585	Gene ID= ENSG00000101194.17 TPM= 1.93 Transcript Type= protein_coding
chr20	62952735	62968597	62952735	62968597	+	transcript2505.chr20.nic@SLC17A9	transcript2505.chr20.nic	protein_coding	62952735,62956765,62957441,62960504,62962624,62963584,62965132,62965610,62966525,62966703	62952889,62956962,62957580,62960603,62963369,62964315,62965166,62965725,62966580,62968597	Gene ID= ENSG00000101194.17 TPM= 1.93 Transcript Type= NA
chr20	63195429	63216234	63195429	63216234	-	ENST00000370339.7@YTHDF1	ENST00000370339.7	protein_coding	63215866,63215577,63213864,63202287,63195429	63216234,63215601,63213943,63203807,63196734	Gene ID= ENSG00000149658.17 TPM= 136.91 Transcript Type= protein_coding
chr20	63195429	63216184	63195429	63216184	-	transcript2515.chr20.nic@YTHDF1	transcript2515.chr20.nic	protein_coding	63215577,63213864,63202287,63195429	63216184,63213943,63203807,63196734	Gene ID= ENSG00000149658.17 TPM= 23.49 Transcript Type= NA
chr20	63215761	63218510	63215761	63218510	+	transcript2522.chr20.nnic@NA	transcript2522.chr20.nnic	NA	63215761	63218510	Gene ID= novel_gene_chr20_2523 TPM= 1.93 Transcript Type= NA
chr20	63272785	63289793	63272785	63289793	+	ENST00000370283.8@ARFGAP1	ENST00000370283.8	protein_coding	63272785,63275577,63276091,63276480,63277205,63278117,63278899,63281291,63282819,63284866,63285654,63286366,63287564	63272920,63275640,63276200,63276651,63277305,63278203,63278995,63281347,63282851,63284922,63285713,63286442,63289793	Gene ID= ENSG00000101199.12 TPM= 51.16 Transcript Type= protein_coding
chr20	63272800	63289789	63272800	63289789	+	transcript2528.chr20.nic@ARFGAP1	transcript2528.chr20.nic	protein_coding	63272800,63275577,63276091,63276480,63277205,63278117,63278899,63281291,63282819,63285654,63286366,63287564	63272920,63275640,63276200,63276651,63277305,63278203,63278995,63281347,63284922,63285713,63286442,63289789	Gene ID= ENSG00000101199.12 TPM= 7.72 Transcript Type= NA
chr20	63488013	63499315	63488013	63499315	-	ENST00000217182.4@EEF1A2	ENST00000217182.4	protein_coding	63499058,63497620,63495856,63494805,63493137,63490479,63488918,63488013	63499315,63497834,63496035,63495101,63493287,63490735,63489152,63488425	Gene ID= ENSG00000101210.10 TPM= 2911.13 Transcript Type= protein_coding
chr20	63520724	63522206	63520724	63522206	+	ENST00000370179.7@PPDPF	ENST00000370179.7	protein_coding	63520724,63521284,63521512,63521668	63520894,63521363,63521589,63522206	Gene ID= ENSG00000125534.9 TPM= 30.89 Transcript Type= protein_coding
chr20	63587602	63627041	63587602	63627041	-	ENST00000370077.1@GMEB2	ENST00000370077.1	protein_coding	63626956,63619267,63604743,63602965,63597757,63595610,63593011,63592533,63592022,63587602	63627041,63619454,63604840,63603092,63597860,63595767,63593082,63592670,63592144,63590729	Gene ID= ENSG00000101216.10 TPM= 23.17 Transcript Type= protein_coding
chr20	63626857	63628707	63626857	63628707	+	transcript2582.chr20.nnic@NA	transcript2582.chr20.nnic	NA	63626857	63628707	Gene ID= novel_gene_chr20_2583 TPM= 10.62 Transcript Type= NA
chr20	63639708	63653427	63639708	63653427	-	ENST00000370053.2@STMN3	ENST00000370053.2	protein_coding	63653327,63644214,63643756,63642108,63639708	63653427,63644309,63643931,63642299,63641397	Gene ID= ENSG00000197457.9 TPM= 3.86 Transcript Type= protein_coding
chr20	63699497	63707882	63699497	63707882	-	transcript2594.chr20.nnic@ARFRP1	transcript2594.chr20.nnic	protein_coding	63707661,63706999,63706651,63706357,63702136,63701830,63700602,63699497	63707882,63707092,63706738,63706439,63702217,63701900,63700702,63700530	Gene ID= ENSG00000101246.19 TPM= 5.79 Transcript Type= NA
chr20	63698643	63708013	63698643	63708013	-	ENST00000622789.4@ARFRP1	ENST00000622789.4	protein_coding	63707867,63706999,63706651,63706357,63702136,63701830,63700602,63698643	63708013,63707097,63706738,63706439,63702217,63701900,63700702,63700530	Gene ID= ENSG00000101246.19 TPM= 44.4 Transcript Type= protein_coding
chr20	63699456	63707838	63699456	63707838	-	ENST00000618838.4@ARFRP1	ENST00000618838.4	protein_coding	63707810,63706999,63706651,63706357,63702136,63701830,63700602,63699456	63707838,63707092,63706738,63706439,63702217,63701900,63700702,63700530	Gene ID= ENSG00000101246.19 TPM= 10.62 Transcript Type= protein_coding
chr20	63699478	63707916	63699478	63707916	-	ENST00000612157.4@ARFRP1	ENST00000612157.4	protein_coding	63707867,63706999,63706651,63706357,63702136,63701830,63699478	63707916,63707097,63706738,63706439,63702217,63701900,63700702	Gene ID= ENSG00000101246.19 TPM= 7.72 Transcript Type= protein_coding
chr20	63708035	63736142	63708035	63736142	+	ENST00000355969.10@ZGPAT	ENST00000355969.10	protein_coding	63708035,63708553,63733219,63733587,63734705,63735159,63735781	63708118,63709164,63733352,63733739,63734824,63735564,63736142	Gene ID= ENSG00000197114.11 TPM= 23.81 Transcript Type= protein_coding
chr20	63708046	63736141	63708046	63736141	+	transcript2613.chr20.nic@ZGPAT	transcript2613.chr20.nic	protein_coding	63708046,63708553,63733219,63733587,63734705,63735159,63735781	63708169,63709164,63733352,63733739,63734824,63735564,63736141	Gene ID= ENSG00000197114.11 TPM= 5.47 Transcript Type= NA
chr20	63708086	63736142	63708086	63736142	+	ENST00000369967.7@ZGPAT	ENST00000369967.7	protein_coding	63708086,63708553,63733219,63733587,63734705,63735159,63735781	63708188,63709164,63733352,63733739,63734824,63735564,63736142	Gene ID= ENSG00000197114.11 TPM= 4.51 Transcript Type= protein_coding
chr20	63736643	63739103	63736643	63739103	+	ENST00000309546.7@LIME1	ENST00000309546.7	protein_coding	63736643,63737533,63737821,63737973,63738183,63738598	63736712,63737647,63737902,63738060,63738499,63739103	Gene ID= ENSG00000203896.9 TPM= 3.86 Transcript Type= protein_coding
chr20	63739724	63743505	63739724	63743505	+	transcript2615.chr20.nic@SLC2A4RG	transcript2615.chr20.nic	protein_coding	63739724,63740377,63741370,63741869,63742130,63742336,63742879	63740038,63740531,63741479,63742056,63742230,63742790,63743505	Gene ID= ENSG00000125520.13 TPM= 10.3 Transcript Type= NA
chr20	63741252	63743505	63741252	63743505	+	ENST00000493772.5@SLC2A4RG	ENST00000493772.5	protein_coding	63741252,63742130,63742336,63742699,63742879	63741479,63742230,63742615,63742790,63743505	Gene ID= ENSG00000125520.13 TPM= 6.92 Transcript Type= processed_transcript
chr20	63739861	63743505	63739861	63743505	+	ENST00000266077.4@SLC2A4RG	ENST00000266077.4	protein_coding	63739861,63740377,63741370,63741869,63742130,63742336,63742699,63742879	63740038,63740531,63741479,63742056,63742230,63742615,63742790,63743505	Gene ID= ENSG00000125520.13 TPM= 20.44 Transcript Type= protein_coding
chr20	63766206	63831315	63766206	63831315	-	transcript2616.chr20.nnic@ZBTB46	transcript2616.chr20.nnic	protein_coding	63831097,63789821,63775678,63769250,63768073,63766206	63831315,63790790,63775962,63769383,63768118,63767982	Gene ID= ENSG00000130584.10 TPM= 2.9 Transcript Type= NA
chr20	63861212	63864293	63861212	63864293	-	ENST00000601296.2@AL118506.1	ENST00000601296.2	antisense_RNA	63861212	63864293	Gene ID= ENSG00000268858.2 TPM= 9.65 Transcript Type= antisense_RNA
chr20	63865290	63891545	63865290	63891545	+	ENST00000346249.8@TPD52L2	ENST00000346249.8	protein_coding	63865290,63869296,63873668,63875816,63882719,63889190,63889850	63865384,63869441,63873816,63875875,63882820,63889238,63891545	Gene ID= ENSG00000101150.17 TPM= 97.5 Transcript Type= protein_coding
chr20	63865290	63891545	63865290	63891545	+	ENST00000348257.9@TPD52L2	ENST00000348257.9	protein_coding	63865290,63869296,63873668,63882719,63889190,63889850	63865384,63869441,63873816,63882820,63889238,63891545	Gene ID= ENSG00000101150.17 TPM= 28.96 Transcript Type= protein_coding
chr20	63895182	63936031	63895182	63936031	+	ENST00000360864.8@DNAJC5	ENST00000360864.8	protein_coding	63895182,63928335,63929312,63930851,63931465	63895323,63928452,63929525,63931022,63936031	Gene ID= ENSG00000101152.10 TPM= 44.4 Transcript Type= protein_coding
chr20	63939829	63956440	63939829	63956440	-	transcript2642.chr20.nnic@UCKL1	transcript2642.chr20.nnic	protein_coding	63956260,63946453,63946161,63945805,63945651,63944545,63944397,63942470,63941110,63940950,63940794,63940594,63940378,63940150,63939829	63956440,63946643,63946267,63945975,63945722,63944734,63944458,63942489,63941208,63941043,63940856,63940716,63940485,63940306,63940055	Gene ID= ENSG00000198276.15 TPM= 62.26 Transcript Type= NA
chr20	63939829	63956415	63939829	63956415	-	ENST00000354216.10@UCKL1	ENST00000354216.10	protein_coding	63956260,63946453,63946161,63945805,63945651,63944545,63944397,63943653,63941110,63940950,63940794,63940594,63940378,63940150,63939829	63956415,63946643,63946267,63945975,63945722,63944734,63944458,63943669,63941208,63941043,63940856,63940716,63940485,63940306,63940055	Gene ID= ENSG00000198276.15 TPM= 31.37 Transcript Type= protein_coding
chr20	63981135	64033100	63981135	64033100	+	ENST00000266079.4@PRPF6	ENST00000266079.4	protein_coding	63981135,63983047,63984907,63993407,63994916,63995327,63999045,63999603,64001077,64010200,64011285,64016723,64022757,64024555,64025939,64026982,64027603,64028478,64029377,64031918,64032841	63981316,63983215,63985025,63993485,63995092,63995482,63999139,63999759,64001239,64010318,64011503,64016845,64022878,64024693,64026058,64027158,64027736,64028569,64029491,64032044,64033100	Gene ID= ENSG00000101161.7 TPM= 226.85 Transcript Type= protein_coding
chr20	64047582	64049641	64047582	64049641	-	ENST00000340356.8@SOX18	ENST00000340356.8	protein_coding	64049159,64047582	64049641,64048962	Gene ID= ENSG00000203883.6 TPM= 10.62 Transcript Type= protein_coding
chr20	64063207	64072347	64063207	64072347	+	transcript2680.chr20.nic@TCEA2	transcript2680.chr20.nic	protein_coding	64063207,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172	64063949,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072347	Gene ID= ENSG00000171703.16 TPM= 3.86 Transcript Type= NA
chr20	64063180	64064123	64063180	64064123	+	transcript2684.chr20.nnic@TCEA2	transcript2684.chr20.nnic	protein_coding	64063180,64063918	64063384,64064123	Gene ID= ENSG00000171703.16 TPM= 3.86 Transcript Type= NA
chr20	64063144	64072346	64063144	64072346	+	ENST00000343484.9@TCEA2	ENST00000343484.9	protein_coding	64063144,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172	64063384,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072346	Gene ID= ENSG00000171703.16 TPM= 17.38 Transcript Type= protein_coding
chr20	64063196	64064123	64063196	64064123	+	ENST00000476113.1@TCEA2	ENST00000476113.1	protein_coding	64063196,64063892	64063384,64064123	Gene ID= ENSG00000171703.16 TPM= 4.83 Transcript Type= processed_transcript
chr20	64073181	64079492	64073181	64079492	-	ENST00000395042.1@RGS19	ENST00000395042.1	protein_coding	64079294,64076857,64076525,64074467,64074144,64073181	64079492,64076954,64076646,64074541,64074378,64074044	Gene ID= ENSG00000171700.13 TPM= 2.9 Transcript Type= protein_coding
chr20	64255725	64275653	64255725	64275653	+	transcript2691.chr20.nic@PCMTD2	transcript2691.chr20.nic	protein_coding	64255725,64258767,64259942,64264429,64265258,64267887,64273221	64255870,64258882,64260272,64264531,64265429,64268010,64275653	Gene ID= ENSG00000203880.11 TPM= 2.9 Transcript Type= NA
chr20	64255736	64276027	64255736	64276027	+	transcript2706.chr20.nic@PCMTD2	transcript2706.chr20.nic	protein_coding	64255736,64259942,64264429,64265258,64267887,64273221	64255924,64260272,64264531,64265429,64268010,64276027	Gene ID= ENSG00000203880.11 TPM= 2.9 Transcript Type= NA
chr20	64255741	64275653	64255741	64275653	+	ENST00000369758.8@PCMTD2	ENST00000369758.8	protein_coding	64255741,64259942,64264429,64265258,64267968,64273221	64255870,64260272,64264531,64265429,64268010,64275653	Gene ID= ENSG00000203880.11 TPM= 8.69 Transcript Type= protein_coding
chr20	64255768	64276230	64255768	64276230	+	ENST00000308824.10@PCMTD2	ENST00000308824.10	protein_coding	64255768,64259942,64264429,64265258,64267887,64273221	64255870,64260272,64264531,64265429,64268010,64276230	Gene ID= ENSG00000203880.11 TPM= 4.83 Transcript Type= protein_coding
chr21	5116343	5128455	5116343	5128455	-	transcript12.chr21.nic@FP565260.6	transcript12.chr21.nic	protein_coding	5128214,5125879,5124756,5121711,5118691,5116343	5128455,5125992,5124875,5121803,5118847,5117231	Gene ID= ENSG00000280071.3 TPM= 8.74 Transcript Type= NA
chr21	5116341	5128425	5116341	5128425	-	ENST00000620528.4@FP565260.6	ENST00000620528.4	protein_coding	5128214,5127898,5125879,5124756,5121711,5118691,5116341	5128425,5127950,5125992,5124875,5121803,5118847,5117231	Gene ID= ENSG00000280071.3 TPM= 211.93 Transcript Type= protein_coding
chr21	5116341	5127143	5116341	5127143	-	ENST00000620015.4@FP565260.6	ENST00000620015.4	protein_coding	5127084,5125879,5124756,5121711,5118691,5116341	5127143,5125992,5124875,5121803,5118847,5117231	Gene ID= ENSG00000280071.3 TPM= 10.18 Transcript Type= protein_coding
chr21	5130871	5154734	5130871	5154734	-	ENST00000617716.3@FP565260.1	ENST00000617716.3	protein_coding	5154623,5152961,5148210,5147779,5147289,5146658,5146137,5144091,5143222,5142532,5141559,5141277,5140953,5139698,5137327,5135935,5135089,5133902,5133655,5133426,5130871	5154734,5153073,5148304,5147878,5147432,5146793,5146366,5144234,5143292,5142668,5141707,5141424,5141103,5139878,5137474,5136043,5135154,5134120,5133805,5133500,5131455	Gene ID= ENSG00000275464.4 TPM= 53.09 Transcript Type= protein_coding
chr21	6111134	6123739	6111134	6123739	+	ENST00000613488.2@CU639417.2	ENST00000613488.2	protein_coding	6111134,6112070,6112739,6116224,6116462,6116894,6117128,6117804,6118256,6118783,6119024,6119720,6120487,6121144	6111252,6112239,6112855,6116287,6116623,6117018,6117251,6118027,6118402,6118908,6119240,6120001,6120718,6123739	Gene ID= ENSG00000275993.2 TPM= 8.69 Transcript Type= protein_coding
chr21	6484624	6499256	6484624	6499256	-	ENST00000639996.1@U2AF1L5	ENST00000639996.1	protein_coding	6499129,6495993,6493044,6492131,6487363,6487107,6486322,6486138,6484624	6499256,6496080,6493110,6492197,6487412,6487205,6486455,6486230,6484916	Gene ID= ENSG00000275895.6 TPM= 5.79 Transcript Type= protein_coding
chr21	6484623	6499200	6484623	6499200	-	ENST00000610664.4@U2AF1L5	ENST00000610664.4	protein_coding	6499129,6495993,6492131,6487363,6487107,6486322,6486138,6484623	6499200,6496080,6492197,6487412,6487205,6486455,6486230,6484916	Gene ID= ENSG00000275895.6 TPM= 86.88 Transcript Type= protein_coding
chr21	7744975	7758627	7744975	7758627	+	ENST00000619874.4@SMIM11B	ENST00000619874.4	protein_coding	7744975,7748899,7754952,7758105	7745038,7748987,7755118,7758627	Gene ID= ENSG00000273590.4 TPM= 22.2 Transcript Type= protein_coding
chr21	7744971	7772246	7744971	7772246	+	ENST00000622934.3@SMIM11B	ENST00000622934.3	protein_coding	7744971,7748899,7754952,7769187,7771567	7745038,7748987,7755118,7769375,7772246	Gene ID= ENSG00000273590.4 TPM= 2.9 Transcript Type= protein_coding
chr21	8206996	8394733	8206996	8394733	+	transcript40.chr21.nnic@FP671120.1	transcript40.chr21.nnic	lincRNA	8206996,8253305,8392313	8209103,8253490,8394733	Gene ID= ENSG00000278996.1 TPM= 2974.6 Transcript Type= NA
chr21	8206996	8394731	8206996	8394731	+	transcript44.chr21.nnic@FP671120.1	transcript44.chr21.nnic	lincRNA	8206996,8253305,8392352	8209103,8253530,8394731	Gene ID= ENSG00000278996.1 TPM= 2948.2 Transcript Type= NA
chr21	8206996	8394737	8206996	8394737	+	transcript46.chr21.nnic@FP671120.1	transcript46.chr21.nnic	lincRNA	8206996,8253305,8392384	8209103,8253564,8394737	Gene ID= ENSG00000278996.1 TPM= 2915.55 Transcript Type= NA
chr21	8206996	8394731	8206996	8394731	+	transcript48.chr21.nnic@FP671120.1	transcript48.chr21.nnic	lincRNA	8206996,8253305,8392426	8209103,8253606,8394731	Gene ID= ENSG00000278996.1 TPM= 2937.19 Transcript Type= NA
chr21	8219894	8220156	8219894	8220156	-	transcript225.chr21.nnic@NA	transcript225.chr21.nnic	NA	8219894	8220156	Gene ID= novel_gene_chr21_226 TPM= 6.76 Transcript Type= NA
chr21	9117181	9129769	9117181	9129769	-	transcript255.chr21.nnic@TEKT4P2	transcript255.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9124362,9120855,9117181	9129769,9127547,9124421,9121378,9118225	Gene ID= ENSG00000188681.11 TPM= 2.09 Transcript Type= NA
chr21	9117309	9129769	9117309	9129769	-	transcript259.chr21.nnic@TEKT4P2	transcript259.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9120855,9117309	9129769,9127547,9121378,9118225	Gene ID= ENSG00000188681.11 TPM= 3.06 Transcript Type= NA
chr21	9076424	9129769	9076424	9129769	-	transcript265.chr21.nnic@TEKT4P2	transcript265.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9076424	9129769,9127547,9077714	Gene ID= ENSG00000188681.11 TPM= 11.75 Transcript Type= NA
chr21	9117187	9129769	9117187	9129769	-	transcript270.chr21.nnic@TEKT4P2	transcript270.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9117187	9129769,9127547,9121378	Gene ID= ENSG00000188681.11 TPM= 2.09 Transcript Type= NA
chr21	9074366	9076518	9074366	9076518	+	transcript273.chr21.nnic@NA	transcript273.chr21.nnic	NA	9074366	9076518	Gene ID= novel_gene_chr21_274 TPM= 2.9 Transcript Type= NA
chr21	14371115	14383187	14371115	14383187	-	ENST00000285667.3@HSPA13	ENST00000285667.3	protein_coding	14383095,14381203,14378199,14375652,14371115	14383187,14381543,14378412,14375819,14374284	Gene ID= ENSG00000155304.5 TPM= 17.38 Transcript Type= protein_coding
chr21	15729920	15878911	15729920	15878911	+	transcript287.chr21.nnic@USP25	transcript287.chr21.nnic	protein_coding	15729920,15762891,15765997,15777904,15780669,15791502,15799757,15805121,15808809,15811137,15818698,15824039,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15847663,15849777,15864268,15866266,15870068,15874403,15877796,15878303	15730438,15762968,15766141,15778027,15780746,15791664,15799843,15805258,15808885,15811210,15818846,15824166,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15847776,15849872,15864446,15866344,15870147,15874526,15877991,15878911	Gene ID= ENSG00000155313.15 TPM= 2.9 Transcript Type= NA
chr21	15729920	15878911	15729920	15878911	+	transcript298.chr21.nnic@USP25	transcript298.chr21.nnic	protein_coding	15729920,15762891,15765997,15777904,15791502,15799757,15805121,15808809,15811137,15818698,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15847663,15849777,15864268,15866266,15870068,15874403,15877796,15878303	15730438,15762968,15766141,15778027,15791664,15799843,15805258,15808885,15811210,15818846,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15847776,15849872,15864446,15866344,15870147,15874526,15877991,15878911	Gene ID= ENSG00000155313.15 TPM= 2.9 Transcript Type= NA
chr21	15730025	15880069	15730025	15880069	+	ENST00000400183.6@USP25	ENST00000400183.6	protein_coding	15730025,15762891,15765997,15777904,15791502,15799757,15805121,15808809,15811137,15818698,15824039,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15847663,15849777,15864268,15866266,15870068,15874403,15877796,15878303	15730438,15762968,15766141,15778027,15791664,15799843,15805258,15808885,15811210,15818846,15824166,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15847776,15849872,15864446,15866344,15870147,15874526,15877991,15880069	Gene ID= ENSG00000155313.15 TPM= 9.65 Transcript Type= protein_coding
chr21	15730025	15878911	15730025	15878911	+	ENST00000285679.10@USP25	ENST00000285679.10	protein_coding	15730025,15762891,15765997,15777904,15791502,15799757,15805121,15808809,15811137,15818698,15824039,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15864268,15866266,15870068,15874403,15877796,15878303	15730438,15762968,15766141,15778027,15791664,15799843,15805258,15808885,15811210,15818846,15824166,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15864446,15866344,15870147,15874526,15877991,15878911	Gene ID= ENSG00000155313.15 TPM= 10.62 Transcript Type= protein_coding
chr21	17788967	17819386	17788967	17819386	-	ENST00000284881.8@C21orf91	ENST00000284881.8	protein_coding	17819303,17818192,17796582,17795208,17788967	17819386,17818325,17797118,17795270,17793581	Gene ID= ENSG00000154642.10 TPM= 2.9 Transcript Type= protein_coding
chr21	18244833	18267373	18244833	18267373	+	ENST00000299295.6@CHODL	ENST00000299295.6	protein_coding	18244833,18256509,18256970,18260200,18262791,18265954	18245302,18256818,18257127,18260286,18262893,18267373	Gene ID= ENSG00000154645.13 TPM= 1.93 Transcript Type= protein_coding
chr21	25585656	25607532	25585656	25607532	-	transcript321.chr21.nnic@MRPL39	transcript321.chr21.nnic	protein_coding	25607403,25606503,25603796,25601368,25599799,25597302,25593893,25592812,25588835,25585656	25607532,25606655,25603935,25601467,25599866,25597414,25593958,25592965,25588882,25585754	Gene ID= ENSG00000154719.13 TPM= 1.93 Transcript Type= NA
chr21	25585656	25607517	25585656	25607517	-	ENST00000352957.8@MRPL39	ENST00000352957.8	protein_coding	25607403,25606449,25603796,25601368,25599799,25597302,25593893,25592812,25588835,25585656	25607517,25606655,25603935,25601467,25599866,25597414,25593958,25592965,25588882,25585754	Gene ID= ENSG00000154719.13 TPM= 63.71 Transcript Type= protein_coding
chr21	25585656	25607517	25585656	25607517	-	ENST00000307301.11@MRPL39	ENST00000307301.11	protein_coding	25607403,25606449,25603796,25601368,25599799,25597302,25593893,25592812,25588835,25587701,25585656	25607517,25606655,25603935,25601467,25599866,25597414,25593958,25592965,25588882,25587789,25585754	Gene ID= ENSG00000154719.13 TPM= 1.93 Transcript Type= protein_coding
chr21	25639272	25717562	25639272	25717562	+	ENST00000480456.5@JAM2	ENST00000480456.5	protein_coding	25639272,25683883,25689866,25693756,25698677,25702170,25705979,25709434,25712340,25714640	25639888,25683948,25689973,25693908,25698879,25702269,25706086,25709449,25712382,25717562	Gene ID= ENSG00000154721.14 TPM= 1.93 Transcript Type= protein_coding
chr21	25724480	25734972	25724480	25734972	-	ENST00000284971.7@ATP5J	ENST00000284971.7	protein_coding	25734853,25729631,25725226,25724480	25734972,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 316.62 Transcript Type= protein_coding
chr21	25724480	25735673	25724480	25735673	-	ENST00000400093.3@ATP5J	ENST00000400093.3	protein_coding	25734989,25729631,25725226,25724480	25735673,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 21.24 Transcript Type= protein_coding
chr21	25724480	25735646	25724480	25735646	-	ENST00000400087.7@ATP5J	ENST00000400087.7	protein_coding	25735315,25729631,25725226,25724480	25735646,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 12.55 Transcript Type= protein_coding
chr21	25724480	25734904	25724480	25734904	-	ENST00000400094.5@ATP5J	ENST00000400094.5	protein_coding	25734853,25734333,25729631,25725226,25724480	25734904,25734375,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 10.62 Transcript Type= protein_coding
chr21	25734570	25772460	25734570	25772460	+	ENST00000354828.7@GABPA	ENST00000354828.7	protein_coding	25734570,25741573,25745210,25749036,25751989,25758010,25762312,25764210,25764595,25769004	25735070,25741675,25745354,25749120,25752234,25758204,25762365,25764350,25764787,25772460	Gene ID= ENSG00000154727.10 TPM= 6.27 Transcript Type= protein_coding
chr21	25735384	25772460	25735384	25772460	+	ENST00000400075.3@GABPA	ENST00000400075.3	protein_coding	25735384,25741573,25745210,25749036,25751989,25758010,25762312,25764210,25764595,25769004	25735578,25741675,25745354,25749120,25752234,25758204,25762365,25764350,25764787,25772460	Gene ID= ENSG00000154727.10 TPM= 17.86 Transcript Type= protein_coding
chr21	25881358	26170768	25881358	26170768	-	transcript345.chr21.nnic@APP	transcript345.chr21.nnic	protein_coding	26170564,26111979,26089943,26053236,26051000,26021840,26000015,25997360,25982344,25975954,25975070,25955627,25954590,25911741,25905024,25897573,25891722,25881358	26170768,26112146,26090072,26053348,26051193,26022044,26000182,25997416,25982477,25976028,25975230,25955755,25954691,25911962,25905077,25897675,25891868,25881771	Gene ID= ENSG00000142192.20 TPM= 4.34 Transcript Type= NA
chr21	25880550	26170787	25880550	26170787	-	ENST00000357903.7@APP	ENST00000357903.7	protein_coding	26170564,26111979,26089943,26053236,26051000,26021840,26000015,25982344,25975954,25975070,25955627,25954590,25911741,25905024,25897573,25891722,25880550	26170787,26112146,26090072,26053348,26051193,26022042,26000182,25982477,25976028,25975228,25955755,25954689,25911962,25905077,25897673,25891868,25881771	Gene ID= ENSG00000142192.20 TPM= 3.38 Transcript Type= protein_coding
chr21	26466209	26573284	26466209	26573284	-	ENST00000299340.8@CYYR1	ENST00000299340.8	protein_coding	26572868,26566266,26480272,26466209	26573284,26566368,26480429,26468631	Gene ID= ENSG00000166265.11 TPM= 20.27 Transcript Type= protein_coding
chr21	26835747	26845409	26835747	26845409	-	ENST00000284984.7@ADAMTS1	ENST00000284984.7	protein_coding	26844225,26842339,26841858,26840998,26840276,26839875,26839587,26838439,26835747	26845409,26842685,26841990,26841165,26840562,26840061,26839762,26838614,26838278	Gene ID= ENSG00000154734.14 TPM= 11.75 Transcript Type= protein_coding
chr21	26838517	26846445	26838517	26846445	-	transcript357.chr21.nic@ADAMTS1	transcript357.chr21.nic	protein_coding	26844225,26842339,26841858,26840998,26840276,26839875,26839587,26838517	26846445,26842685,26841990,26841165,26840562,26840061,26839762,26838614	Gene ID= ENSG00000154734.14 TPM= 5.47 Transcript Type= NA
chr21	26836292	26846445	26836292	26846445	-	transcript358.chr21.nnic@ADAMTS1	transcript358.chr21.nnic	protein_coding	26844225,26842339,26841858,26840276,26839875,26839587,26836292	26846445,26842685,26841990,26840562,26840061,26839762,26838278	Gene ID= ENSG00000154734.14 TPM= 4.99 Transcript Type= NA
chr21	28872191	28885375	28872191	28885375	-	transcript363.chr21.nic@N6AMT1	transcript363.chr21.nic	protein_coding	28885212,28882985,28882160,28878192,28876312,28872191	28885375,28883071,28882250,28878333,28876491,28872739	Gene ID= ENSG00000156239.11 TPM= 1.93 Transcript Type= NA
chr21	28872191	28885371	28872191	28885371	-	ENST00000303775.9@N6AMT1	ENST00000303775.9	protein_coding	28885212,28882985,28882160,28879870,28878192,28872191	28885371,28883071,28882250,28879953,28878333,28876491	Gene ID= ENSG00000156239.11 TPM= 1.93 Transcript Type= protein_coding
chr21	28947548	28992880	28947548	28992880	-	transcript372.chr21.nic@LTN1	transcript372.chr21.nic	protein_coding	28992764,28986731,28986139,28984692,28982316,28981119,28971271,28970552,28969466,28966370,28965865,28960517,28959458,28958386,28957332,28956762,28953217,28952160,28947548	28992880,28986934,28986237,28984922,28982368,28981299,28971444,28970742,28969601,28967179,28965906,28960706,28959697,28958539,28957476,28956948,28953376,28952264,28947606	Gene ID= ENSG00000198862.13 TPM= 7.24 Transcript Type= NA
chr21	29002817	29008721	29002817	29008721	+	transcript380.chr21.nnic@NA	transcript380.chr21.nnic	NA	29002817,29007896	29003171,29008721	Gene ID= novel_gene_chr21_381 TPM= 1.93 Transcript Type= NA
chr21	29004384	29019378	29004384	29019378	-	ENST00000493196.1@RWDD2B	ENST00000493196.1	protein_coding	29019211,29008395,29008240,29007761,29004384	29019378,29008621,29008307,29008123,29006651	Gene ID= ENSG00000156253.6 TPM= 9.65 Transcript Type= protein_coding
chr21	29005759	29019359	29005759	29019359	-	ENST00000472184.1@RWDD2B	ENST00000472184.1	protein_coding	29019211,29008240,29007761,29005759	29019359,29008621,29008123,29006651	Gene ID= ENSG00000156253.6 TPM= 8.69 Transcript Type= retained_intron
chr21	29024646	29054488	29024646	29054488	+	transcript384.chr21.nic@USP16	transcript384.chr21.nic	protein_coding	29024646,29025709,29027873,29030595,29034837,29036271,29037279,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066	29024777,29025771,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 10.86 Transcript Type= NA
chr21	29024629	29054488	29024629	29054488	+	ENST00000399976.6@USP16	ENST00000399976.6	protein_coding	29024629,29027873,29030595,29034837,29036271,29037276,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066	29024777,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 1.21 Transcript Type= protein_coding
chr21	29024629	29054488	29024629	29054488	+	ENST00000399975.7@USP16	ENST00000399975.7	protein_coding	29024629,29027873,29030595,29034837,29036271,29037279,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066	29024777,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 1.21 Transcript Type= protein_coding
chr21	29024651	29054488	29024651	29054488	+	ENST00000334352.8@USP16	ENST00000334352.8	protein_coding	29024651,29025709,29027873,29030595,29034837,29036271,29037276,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066	29024777,29025771,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 21.48 Transcript Type= protein_coding
chr21	29056324	29073797	29056324	29073797	-	ENST00000286788.8@CCT8	ENST00000286788.8	protein_coding	29073531,29070247,29069423,29067556,29066891,29066716,29064968,29063352,29062490,29062328,29062128,29061496,29061253,29060541,29056324	29073797,29070337,29069502,29067705,29067071,29066777,29065105,29063530,29062556,29062415,29062243,29061567,29061417,29060660,29056552	Gene ID= ENSG00000156261.12 TPM= 385.32 Transcript Type= protein_coding
chr21	29130485	29175889	29130485	29175889	+	ENST00000399928.5@MAP3K7CL	ENST00000399928.5	protein_coding	29130485,29133306,29149189,29159941,29174712	29130923,29133414,29149250,29160056,29175889	Gene ID= ENSG00000156265.15 TPM= 8.69 Transcript Type= protein_coding
chr21	29298911	29577698	29298911	29577698	+	transcript406.chr21.nnic@BACH1	transcript406.chr21.nnic	protein_coding	29298911,29321221,29326059,29329487,29351634,29352579,29411522,29559829,29561630,29561833,29576902	29298953,29321514,29327393,29329693,29351813,29352663,29411624,29559910,29561745,29561908,29577698	Gene ID= ENSG00000156273.15 TPM= 1.93 Transcript Type= NA
chr21	29298925	29330973	29298925	29330973	+	transcript421.chr21.nic@BACH1	transcript421.chr21.nic	protein_coding	29298925,29321221,29326059,29329487	29298953,29321514,29327393,29330973	Gene ID= ENSG00000156273.15 TPM= 2.9 Transcript Type= NA
chr21	29298871	29346148	29298871	29346148	+	ENST00000286800.7@BACH1	ENST00000286800.7	protein_coding	29298871,29321221,29326059,29329487,29342399	29298953,29321514,29327393,29329693,29346148	Gene ID= ENSG00000156273.15 TPM= 22.2 Transcript Type= protein_coding
chr21	29321647	29325051	29321647	29325051	-	transcript425.chr21.nnic@NA	transcript425.chr21.nnic	NA	29321647	29325051	Gene ID= novel_gene_chr21_426 TPM= 1.93 Transcript Type= NA
chr21	31659666	31668931	31659666	31668931	+	ENST00000389995.4@SOD1	ENST00000389995.4	protein_coding	31659666,31663790,31666449,31667258,31668471	31659784,31663886,31666518,31667375,31668931	Gene ID= ENSG00000142168.14 TPM= 1.28 Transcript Type= protein_coding
chr21	31659622	31668931	31659622	31668931	+	ENST00000270142.10@SOD1	ENST00000270142.10	protein_coding	31659622,31663790,31666449,31667258,31668471	31659841,31663886,31666518,31667375,31668931	Gene ID= ENSG00000142168.14 TPM= 225.24 Transcript Type= protein_coding
chr21	31671033	31732075	31671033	31732075	-	ENST00000286835.11@SCAF4	ENST00000286835.11	protein_coding	31731663,31706274,31705423,31703765,31702244,31701776,31700995,31696569,31696113,31694813,31694204,31693294,31692349,31691817,31690797,31688307,31685568,31685398,31685049,31671033	31732075,31706357,31705467,31703926,31702379,31701918,31701171,31696750,31696221,31694980,31694289,31693484,31692449,31691930,31690953,31688464,31685733,31685484,31685240,31672354	Gene ID= ENSG00000156304.14 TPM= 9.65 Transcript Type= protein_coding
chr21	31732272	31734367	31732272	31734367	+	transcript448.chr21.nnic@NA	transcript448.chr21.nnic	NA	31732272	31734367	Gene ID= novel_gene_chr21_449 TPM= 1.93 Transcript Type= NA
chr21	32279175	32280998	32279175	32280998	+	transcript452.chr21.nnic@NA	transcript452.chr21.nnic	NA	32279175	32280998	Gene ID= novel_gene_chr21_453 TPM= 1.93 Transcript Type= NA
chr21	32311018	32393026	32311018	32393026	-	ENST00000382751.3@URB1	ENST00000382751.3	protein_coding	32392769,32385545,32384313,32383422,32378445,32375398,32373647,32372507,32368403,32366618,32363156,32361892,32361007,32359796,32357537,32355449,32354859,32353933,32352710,32350704,32349304,32346956,32345374,32344570,32341466,32338707,32337404,32337094,32334163,32333317,32325229,32324491,32322478,32321801,32320531,32319217,32317676,32316466,32311018	32393026,32385684,32384464,32383554,32378541,32375483,32373772,32372631,32368598,32366755,32363329,32362021,32361123,32359908,32357656,32355565,32354997,32354103,32352906,32350922,32349483,32347811,32345575,32344756,32341524,32338900,32337514,32337157,32334334,32333419,32325389,32324602,32322584,32321944,32320640,32319414,32317917,32317065,32315099	Gene ID= ENSG00000142207.6 TPM= 15.44 Transcript Type= protein_coding
chr21	32393130	32393960	32393130	32393960	+	ENST00000534991.3@URB1-AS1	ENST00000534991.3	lincRNA	32393130	32393960	Gene ID= ENSG00000256073.3 TPM= 20.27 Transcript Type= lincRNA
chr21	32411317	32412684	32411317	32412684	-	transcript463.chr21.nnic@NA	transcript463.chr21.nnic	NA	32411317	32412684	Gene ID= novel_gene_chr21_464 TPM= 8.69 Transcript Type= NA
chr21	32411723	32515389	32411723	32515389	+	transcript456.chr21.nic@EVA1C	transcript456.chr21.nic	protein_coding	32411723,32453312,32457597,32467696,32495027,32501415,32503926,32514814	32412193,32453508,32457720,32467848,32495170,32501495,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 1.93 Transcript Type= NA
chr21	32412680	32515389	32412680	32515389	+	transcript461.chr21.nic@EVA1C	transcript461.chr21.nic	protein_coding	32412680,32467696,32495027,32501415,32503926,32514814	32413013,32467848,32495170,32501495,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 7.72 Transcript Type= NA
chr21	32601667	32612866	32601667	32612866	-	ENST00000290155.7@C21orf59	ENST00000290155.7	protein_coding	32612105,32609838,32607649,32604125,32603161,32602272,32601667	32612866,32610005,32607716,32604283,32603292,32602367,32601973	Gene ID= ENSG00000159079.18 TPM= 48.27 Transcript Type= protein_coding
chr21	32758320	32771792	32758320	32771792	-	transcript492.chr21.nic@PAXBP1	transcript492.chr21.nic	protein_coding	32771326,32769814,32764348,32762096,32761059,32759777,32758320	32771792,32769942,32764524,32762317,32761162,32759994,32759269	Gene ID= ENSG00000159086.14 TPM= 3.38 Transcript Type= NA
chr21	32733899	32771858	32733899	32771858	-	ENST00000331923.8@PAXBP1	ENST00000331923.8	protein_coding	32771326,32769814,32764348,32762096,32761059,32759777,32759080,32755230,32751119,32750917,32748499,32745574,32744792,32743678,32743248,32738173,32737254,32733899	32771858,32769942,32764524,32762317,32761162,32759994,32759269,32755353,32751218,32751032,32748698,32745718,32744913,32743754,32743314,32738319,32737408,32735067	Gene ID= ENSG00000159086.14 TPM= 26.55 Transcript Type= protein_coding
chr21	33229901	33262756	33229901	33262756	+	ENST00000382264.7@IFNAR2	ENST00000382264.7	protein_coding	33229901,33241886,33243673,33244951,33246718,33248709,33252662,33260597,33262561	33230216,33241977,33243714,33245074,33246890,33248854,33252830,33260727,33262756	Gene ID= ENSG00000159110.19 TPM= 1.93 Transcript Type= protein_coding
chr21	33266358	33297234	33266358	33297234	+	ENST00000290200.6@IL10RB	ENST00000290200.6	protein_coding	33266358,33268394,33276596,33279752,33283094,33288104,33296184	33266514,33268517,33276753,33279918,33283241,33288261,33297234	Gene ID= ENSG00000243646.9 TPM= 13.51 Transcript Type= protein_coding
chr21	33324145	33324872	33324145	33324872	-	transcript505.chr21.nnic@NA	transcript505.chr21.nnic	NA	33324145	33324872	Gene ID= novel_gene_chr21_506 TPM= 2.9 Transcript Type= NA
chr21	33324904	33359862	33324904	33359862	+	ENST00000270139.7@IFNAR1	ENST00000270139.7	protein_coding	33324904,33335524,33340999,33343268,33343535,33345246,33349091,33349389,33352758,33353638,33355316	33325131,33335647,33341174,33343422,33343676,33345360,33349290,33349543,33352908,33353783,33359862	Gene ID= ENSG00000142166.12 TPM= 25.1 Transcript Type= protein_coding
chr21	33403432	33437521	33403432	33437521	+	ENST00000381995.5@IFNGR2	ENST00000381995.5	protein_coding	33403432,33410836,33414888,33421480,33426884,33432177,33432714,33436828	33403616,33410892,33415020,33421685,33427032,33432336,33432871,33437521	Gene ID= ENSG00000159128.14 TPM= 3.86 Transcript Type= protein_coding
chr21	33402896	33437521	33402896	33437521	+	ENST00000290219.10@IFNGR2	ENST00000290219.10	protein_coding	33402896,33414888,33421480,33426884,33432177,33432714,33436828	33403616,33415020,33421685,33427032,33432336,33432871,33437521	Gene ID= ENSG00000159128.14 TPM= 38.61 Transcript Type= protein_coding
chr21	33403420	33437521	33403420	33437521	+	transcript534.chr21.nnic@IFNGR2	transcript534.chr21.nnic	protein_coding	33403420,33414888,33421480,33426884,33432714,33436828	33403616,33415020,33421685,33427032,33432871,33437521	Gene ID= ENSG00000159128.14 TPM= 7.72 Transcript Type= NA
chr21	33449135	33480011	33449135	33480011	-	ENST00000542230.6@TMEM50B	ENST00000542230.6	protein_coding	33479838,33468787,33467010,33465342,33460413,33455727,33449135	33480011,33468926,33467122,33465409,33460505,33455784,33450863	Gene ID= ENSG00000142188.16 TPM= 138.04 Transcript Type= protein_coding
chr21	33432485	33479943	33432485	33479943	-	ENST00000420455.5@TMEM50B	ENST00000420455.5	protein_coding	33479838,33468787,33467010,33465342,33460413,33455727,33448782,33439214,33432485	33479943,33468926,33467122,33465409,33460505,33455784,33450863,33439297,33432802	Gene ID= ENSG00000142188.16 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr21	33485534	33491743	33485534	33491743	-	transcript541.chr21.nnic@DNAJC28	transcript541.chr21.nnic	protein_coding	33491602,33487888,33485534	33491743,33489424,33485757	Gene ID= ENSG00000177692.11 TPM= 1.93 Transcript Type= NA
chr21	33503931	33542842	33503931	33542842	-	ENST00000381831.7@GART	ENST00000381831.7	protein_coding	33542587,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33503931	33542842,33539323,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315	Gene ID= ENSG00000159131.16 TPM= 1.93 Transcript Type= protein_coding
chr21	33503931	33542138	33503931	33542138	-	ENST00000381815.8@GART	ENST00000381815.8	protein_coding	33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33503931	33542138,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315	Gene ID= ENSG00000159131.16 TPM= 33.54 Transcript Type= protein_coding
chr21	33503933	33542831	33503933	33542831	-	transcript553.chr21.nnic@GART	transcript553.chr21.nnic	protein_coding	33542548,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33503933	33542831,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315	Gene ID= ENSG00000159131.16 TPM= 6.27 Transcript Type= NA
chr21	33509857	33542142	33509857	33542142	-	transcript560.chr21.nnic@GART	transcript560.chr21.nnic	protein_coding	33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509857	33542142,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33510708	Gene ID= ENSG00000159131.16 TPM= 4.1 Transcript Type= NA
chr21	33524009	33542114	33524009	33542114	-	ENST00000361093.9@GART	ENST00000361093.9	protein_coding	33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524009	33542114,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000	Gene ID= ENSG00000159131.16 TPM= 19.55 Transcript Type= protein_coding
chr21	33542618	33577481	33542618	33577481	+	ENST00000356577.8@SON	ENST00000356577.8	protein_coding	33542618,33546213,33549476,33557156,33559230,33559587,33567157,33568971,33573308,33575596,33575778,33576365	33543169,33546379,33555391,33557316,33559376,33559775,33567267,33569087,33573455,33575667,33575893,33577481	Gene ID= ENSG00000159140.19 TPM= 77.22 Transcript Type= protein_coding
chr21	33543065	33559056	33543065	33559056	+	ENST00000381679.8@SON	ENST00000381679.8	protein_coding	33543065,33546213,33549476,33557156,33557546	33543169,33546379,33555391,33557316,33559056	Gene ID= ENSG00000159140.19 TPM= 17.38 Transcript Type= protein_coding
chr21	33577905	33588708	33577905	33588708	-	ENST00000303071.9@DONSON	ENST00000303071.9	protein_coding	33588321,33587522,33585978,33584590,33583488,33582165,33581951,33581302,33579350,33577905	33588708,33587602,33586181,33584768,33583666,33582246,33582055,33581500,33579562,33578444	Gene ID= ENSG00000159147.17 TPM= 3.86 Transcript Type= protein_coding
chr21	33577905	33588702	33577905	33588702	-	transcript572.chr21.nic@DONSON	transcript572.chr21.nic	protein_coding	33588321,33587522,33585978,33584590,33581951,33581302,33579350,33577905	33588702,33587602,33586181,33584768,33582055,33581500,33579562,33578444	Gene ID= ENSG00000159147.17 TPM= 1.93 Transcript Type= NA
chr21	33589341	33641761	33589341	33641761	-	transcript581.chr21.nic@CRYZL1	transcript581.chr21.nic	protein_coding	33641681,33641179,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33591162,33589341	33641761,33641305,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33591207,33589921	Gene ID= ENSG00000205758.11 TPM= 5.31 Transcript Type= NA
chr21	33589341	33641760	33589341	33641760	-	ENST00000381554.7@CRYZL1	ENST00000381554.7	protein_coding	33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33591162,33589341	33641760,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33591207,33589921	Gene ID= ENSG00000205758.11 TPM= 2.41 Transcript Type= protein_coding
chr21	33602410	33641761	33602410	33641761	-	transcript600.chr21.nic@CRYZL1	transcript600.chr21.nic	protein_coding	33641681,33641179,33631486,33624683,33621996,33613538,33602410	33641761,33641305,33631557,33624760,33622068,33613606,33603537	Gene ID= ENSG00000205758.11 TPM= 1.93 Transcript Type= NA
chr21	33589467	33641747	33589467	33641747	-	ENST00000381540.7@CRYZL1	ENST00000381540.7	protein_coding	33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33591162,33589467	33641747,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33591211,33589921	Gene ID= ENSG00000205758.11 TPM= 4.83 Transcript Type= protein_coding
chr21	33642482	33794425	33642482	33794425	+	transcript603.chr21.nic@ITSN1	transcript603.chr21.nic	protein_coding	33642482,33718797,33721178,33722588,33735044,33750143,33751810,33755297,33761923,33765875,33767713,33772061,33774729,33774968,33781461,33781994,33794341	33642713,33718856,33721270,33722651,33735204,33750322,33751906,33755397,33761986,33766012,33767828,33772323,33774878,33775108,33781548,33782133,33794425	Gene ID= ENSG00000205726.14 TPM= 5.79 Transcript Type= NA
chr21	33903456	33915776	33903456	33915776	-	transcript614.chr21.nic@ATP5O	transcript614.chr21.nic	protein_coding	33915136,33914450,33912289,33909082,33907341,33903935,33903456	33915776,33914500,33912399,33909211,33907453,33904021,33903639	Gene ID= ENSG00000241837.6 TPM= 27.51 Transcript Type= NA
chr21	33903453	33915980	33903453	33915980	-	ENST00000290299.6@ATP5O	ENST00000290299.6	protein_coding	33915728,33914450,33912289,33909082,33907341,33903935,33903453	33915980,33914500,33912399,33909211,33907453,33904021,33903639	Gene ID= ENSG00000241837.6 TPM= 414.6 Transcript Type= protein_coding
chr21	33903453	33915761	33903453	33915761	-	ENST00000431254.5@ATP5O	ENST00000431254.5	protein_coding	33915728,33914450,33912289,33907341,33903935,33903453	33915761,33914500,33912399,33907453,33904021,33903639	Gene ID= ENSG00000241837.6 TPM= 13.51 Transcript Type= nonsense_mediated_decay
chr21	34073523	34143034	34073523	34143034	+	ENST00000399312.2@MRPS6	ENST00000399312.2	protein_coding	34073523,34125341,34142408	34073745,34125480,34143034	Gene ID= ENSG00000243927.5 TPM= 103.77 Transcript Type= protein_coding
chr21	34073578	34143027	34073578	34143027	+	transcript634.chr21.nnic@MRPS6	transcript634.chr21.nnic	protein_coding	34073578,34142408	34073745,34143027	Gene ID= ENSG00000243927.5 TPM= 8.21 Transcript Type= NA
chr21	34073576	34074275	34073576	34074275	+	transcript637.chr21.nnic@NA	transcript637.chr21.nnic	NA	34073576	34074275	Gene ID= novel_gene_chr21_638 TPM= 7.72 Transcript Type= NA
chr21	34375480	34402777	34375480	34402777	+	ENST00000481710.5@SMIM11A	ENST00000481710.5	protein_coding	34375480,34379428,34385478,34399711,34402091	34375567,34379516,34385644,34399899,34402777	Gene ID= ENSG00000205670.10 TPM= 1.93 Transcript Type= processed_transcript
chr21	34375500	34389154	34375500	34389154	+	ENST00000399292.7@SMIM11A	ENST00000399292.7	protein_coding	34375500,34379428,34385478,34388629	34375567,34379516,34385644,34389154	Gene ID= ENSG00000205670.10 TPM= 13.51 Transcript Type= protein_coding
chr21	34516484	34615142	34516484	34615142	-	ENST00000313806.8@RCAN1	ENST00000313806.8	protein_coding	34614760,34523537,34521499,34516484	34615142,34523710,34521658,34518256	Gene ID= ENSG00000159200.17 TPM= 91.7 Transcript Type= protein_coding
chr21	34788286	34792485	34788286	34792485	-	transcript645.chr21.nnic@NA	transcript645.chr21.nnic	NA	34788286	34792485	Gene ID= novel_gene_chr21_646 TPM= 2.9 Transcript Type= NA
chr21	35039001	35040792	35039001	35040792	+	transcript647.chr21.nnic@NA	transcript647.chr21.nnic	NA	35039001	35040792	Gene ID= novel_gene_chr21_648 TPM= 5.79 Transcript Type= NA
chr21	36034542	36060563	36034542	36060563	-	transcript650.chr21.nnic@SETD4	transcript650.chr21.nnic	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043782,36043401,36041807,36040575,36038150,36036518,36036085,36034542	36060563,36058924,36057204,36053620,36048396,36046011,36043956,36043651,36041888,36040655,36038273,36036680,36036251,36035960	Gene ID= ENSG00000185917.13 TPM= 2.25 Transcript Type= NA
chr21	36034541	36060563	36034541	36060563	-	transcript660.chr21.nic@SETD4	transcript660.chr21.nic	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043782,36041807,36040575,36038150,36034541	36060563,36058924,36057204,36053620,36048396,36046011,36043956,36041888,36040655,36038273,36036251	Gene ID= ENSG00000185917.13 TPM= 2.25 Transcript Type= NA
chr21	36043686	36060563	36043686	36060563	-	transcript667.chr21.nic@SETD4	transcript667.chr21.nic	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043686	36060563,36058924,36057204,36053620,36048396,36046011,36043956	Gene ID= ENSG00000185917.13 TPM= 11.58 Transcript Type= NA
chr21	36034541	36060550	36034541	36060550	-	ENST00000332131.8@SETD4	ENST00000332131.8	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043782,36041807,36040575,36038150,36036085,36034541	36060550,36058924,36057204,36053620,36048396,36046011,36043956,36041888,36040655,36038273,36036251,36035960	Gene ID= ENSG00000185917.13 TPM= 2.25 Transcript Type= protein_coding
chr21	36069941	36073166	36069941	36073166	+	ENST00000290349.10@CBR1	ENST00000290349.10	protein_coding	36069941,36070950,36072446	36070404,36071057,36073166	Gene ID= ENSG00000159228.12 TPM= 28.96 Transcript Type= protein_coding
chr21	36069941	36073166	36069941	36073166	+	ENST00000530908.5@CBR1	ENST00000530908.5	protein_coding	36069941,36070950,36071815	36070404,36071057,36073166	Gene ID= ENSG00000159228.12 TPM= 1.93 Transcript Type= protein_coding
chr21	36320189	36376646	36320189	36376646	+	ENST00000400485.5@MORC3	ENST00000400485.5	protein_coding	36320189,36333646,36336874,36337732,36338774,36341399,36344579,36344912,36349311,36356620,36359955,36360184,36362183,36364093,36368988,36372374,36375143	36320303,36333718,36337006,36337946,36338921,36341546,36344707,36345031,36349408,36356724,36360077,36360258,36362228,36364259,36369876,36372531,36376646	Gene ID= ENSG00000159256.12 TPM= 26.06 Transcript Type= protein_coding
chr21	36699134	36749917	36699134	36749917	+	ENST00000290399.10@SIM2	ENST00000290399.10	protein_coding	36699134,36709168,36712533,36719821,36723045,36726119,36731045,36741717,36743387,36744728,36747665	36699921,36709250,36712622,36719929,36723130,36726318,36731151,36741864,36743555,36745136,36749917	Gene ID= ENSG00000159263.15 TPM= 1.93 Transcript Type= protein_coding
chr21	37065374	37073187	37065374	37073187	-	transcript729.chr21.nnic@PIGP	transcript729.chr21.nnic	protein_coding	37073061,37072434,37069552,37067262,37065374	37073187,37072537,37069624,37067380,37065712	Gene ID= ENSG00000185808.13 TPM= 2.41 Transcript Type= NA
chr21	37065374	37073011	37065374	37073011	-	ENST00000399103.5@PIGP	ENST00000399103.5	protein_coding	37072991,37072434,37069552,37067262,37065374	37073011,37072537,37069624,37067380,37065712	Gene ID= ENSG00000185808.13 TPM= 2.41 Transcript Type= protein_coding
chr21	37065374	37073170	37065374	37073170	-	ENST00000399098.5@PIGP	ENST00000399098.5	protein_coding	37073000,37072434,37072145,37069552,37067262,37065374	37073170,37072537,37072310,37069624,37067380,37065712	Gene ID= ENSG00000185808.13 TPM= 3.86 Transcript Type= protein_coding
chr21	37073251	37165751	37073251	37165751	+	ENST00000418766.5@TTC3	ENST00000418766.5	protein_coding	37073251,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550	37073473,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37165751	Gene ID= ENSG00000182670.13 TPM= 6.76 Transcript Type= protein_coding
chr21	37073271	37203103	37073271	37203103	+	ENST00000355666.5@TTC3	ENST00000355666.5	protein_coding	37073271,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550,37167555,37172595,37182774,37185706,37187049,37188495,37191334,37192112,37195675,37197570,37197882,37200232,37201440	37073364,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37166615,37167620,37172744,37182913,37185774,37187145,37188595,37191424,37192213,37196036,37197696,37198025,37200324,37203103	Gene ID= ENSG00000182670.13 TPM= 3.86 Transcript Type= protein_coding
chr21	37073267	37151958	37073267	37151958	+	ENST00000450533.5@TTC3	ENST00000450533.5	protein_coding	37073267,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893	37073364,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37151958	Gene ID= ENSG00000182670.13 TPM= 7.72 Transcript Type= protein_coding
chr21	37073249	37151927	37073249	37151927	+	transcript714.chr21.nnic@TTC3	transcript714.chr21.nnic	protein_coding	37073249,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37151893	37073473,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37151927	Gene ID= ENSG00000182670.13 TPM= 1.93 Transcript Type= NA
chr21	37073268	37165751	37073268	37165751	+	transcript716.chr21.nic@TTC3	transcript716.chr21.nic	protein_coding	37073268,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550	37073364,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37165751	Gene ID= ENSG00000182670.13 TPM= 3.86 Transcript Type= NA
chr21	37223420	37267330	37223420	37267330	-	transcript744.chr21.nnic@DSCR3	transcript744.chr21.nnic	protein_coding	37267238,37240496,37238460,37233362,37232377,37228242,37227654,37223420	37267330,37240639,37238609,37233442,37232451,37228373,37227806,37225626	Gene ID= ENSG00000157538.13 TPM= 6.76 Transcript Type= NA
chr21	37223420	37268137	37223420	37268137	-	transcript750.chr21.nnic@DSCR3	transcript750.chr21.nnic	protein_coding	37267238,37240496,37232377,37228223,37227654,37223420	37268137,37240639,37232451,37228373,37227806,37225626	Gene ID= ENSG00000157538.13 TPM= 7.24 Transcript Type= NA
chr21	37223420	37267532	37223420	37267532	-	ENST00000309117.10@DSCR3	ENST00000309117.10	protein_coding	37267238,37240496,37238460,37233362,37232377,37228223,37227654,37223420	37267532,37240639,37238609,37233442,37232451,37228373,37227806,37225626	Gene ID= ENSG00000157538.13 TPM= 35.23 Transcript Type= protein_coding
chr21	37261082	37267340	37261082	37267340	-	ENST00000498789.1@DSCR3	ENST00000498789.1	protein_coding	37267238,37261082	37267340,37261937	Gene ID= ENSG00000157538.13 TPM= 2.9 Transcript Type= processed_transcript
chr21	37365474	37366469	37365474	37366469	-	transcript757.chr21.nnic@NA	transcript757.chr21.nnic	NA	37365474	37366469	Gene ID= novel_gene_chr21_758 TPM= 1.93 Transcript Type= NA
chr21	37512999	37515170	37512999	37515170	+	transcript755.chr21.nnic@NA	transcript755.chr21.nnic	NA	37512999	37515170	Gene ID= novel_gene_chr21_756 TPM= 9.65 Transcript Type= NA
chr21	37559979	37564294	37559979	37564294	-	transcript759.chr21.nnic@NA	transcript759.chr21.nnic	NA	37559979	37564294	Gene ID= novel_gene_chr21_760 TPM= 2.9 Transcript Type= NA
chr21	39175458	39183454	39175458	39183454	-	transcript780.chr21.nic@PSMG1	transcript780.chr21.nic	protein_coding	39183252,39181772,39178449,39177435,39175458	39183454,39181878,39180436,39177571,39175664	Gene ID= ENSG00000183527.11 TPM= 1.93 Transcript Type= NA
chr21	39184176	39313819	39184176	39313819	-	ENST00000333229.6@BRWD1	ENST00000333229.6	protein_coding	39313443,39313241,39313072,39312841,39298432,39296265,39295743,39293811,39280148,39278743,39277251,39276173,39274374,39270283,39269899,39264891,39264460,39258487,39255645,39250796,39247701,39238479,39236595,39232373,39232177,39229312,39228500,39225086,39224408,39218505,39218152,39215237,39213481,39212666,39210786,39209995,39206108,39202325,39200219,39198763,39196498,39184176	39313819,39313299,39313101,39312900,39298582,39296363,39295903,39294032,39280248,39278813,39277351,39276213,39274472,39270433,39270033,39265019,39264685,39258672,39255828,39250889,39247832,39238573,39236784,39232498,39232284,39229436,39228582,39225197,39224469,39218660,39218272,39215362,39213553,39212707,39210929,39210147,39206274,39202545,39200386,39199662,39197415,39187417	Gene ID= ENSG00000185658.13 TPM= 1.93 Transcript Type= protein_coding
chr21	39296437	39313642	39296437	39313642	-	ENST00000341322.4@BRWD1	ENST00000341322.4	protein_coding	39313443,39313241,39313072,39312841,39296437	39313642,39313299,39313101,39312900,39298582	Gene ID= ENSG00000185658.13 TPM= 65.64 Transcript Type= protein_coding
chr21	39342315	39349061	39342315	39349061	-	transcript802.chr21.nic@HMGN1	transcript802.chr21.nic	protein_coding	39348903,39348545,39348422,39348292,39345830,39345146,39342315	39349061,39348577,39348451,39348339,39347952,39345274,39343159	Gene ID= ENSG00000205581.10 TPM= 2.25 Transcript Type= NA
chr21	39342315	39349060	39342315	39349060	-	transcript804.chr21.nic@HMGN1	transcript804.chr21.nic	protein_coding	39348903,39348545,39348422,39345830,39345146,39342315	39349060,39348577,39348451,39348339,39345274,39343159	Gene ID= ENSG00000205581.10 TPM= 2.25 Transcript Type= NA
chr21	39342315	39349200	39342315	39349200	-	ENST00000380749.9@HMGN1	ENST00000380749.9	protein_coding	39348903,39348545,39348422,39348292,39345146,39342315	39349200,39348577,39348451,39348339,39345274,39343159	Gene ID= ENSG00000205581.10 TPM= 11.9 Transcript Type= protein_coding
chr21	39380244	39397889	39380244	39397889	+	ENST00000333781.9@WRB	ENST00000333781.9	protein_coding	39380244,39390698,39391769,39393166,39396866	39380486,39390863,39391836,39393280,39397889	Gene ID= ENSG00000182093.14 TPM= 27.99 Transcript Type= protein_coding
chr21	39387765	39397889	39387765	39397889	+	ENST00000380708.5@WRB	ENST00000380708.5	protein_coding	39387765,39390698,39391769,39393166,39396866	39387855,39390863,39391836,39393280,39397889	Gene ID= ENSG00000182093.14 TPM= 1.93 Transcript Type= protein_coding
chr21	39422162	39446028	39422162	39446028	-	transcript832.chr21.nnic@LCA5L	transcript832.chr21.nnic	protein_coding	39445725,39429131,39422162	39446028,39429211,39423490	Gene ID= ENSG00000157578.13 TPM= 1.93 Transcript Type= NA
chr21	39451830	39515506	39451830	39515506	+	ENST00000333634.8@SH3BGR	ENST00000333634.8	protein_coding	39451830,39462375,39475135,39499823,39508998,39511680,39515088	39452141,39462560,39475215,39499915,39509027,39511809,39515506	Gene ID= ENSG00000185437.13 TPM= 128.22 Transcript Type= protein_coding
chr21	39452036	39515498	39452036	39515498	+	transcript818.chr21.nnic@SH3BGR	transcript818.chr21.nnic	protein_coding	39452036,39462375,39475135,39499823,39508998,39515088	39452141,39462560,39475215,39499915,39509027,39515498	Gene ID= ENSG00000185437.13 TPM= 2.9 Transcript Type= NA
chr21	39452123	39515506	39452123	39515506	+	ENST00000452550.5@SH3BGR	ENST00000452550.5	protein_coding	39452123,39462375,39475135,39508998,39511680,39515088	39452141,39462560,39475215,39509027,39511809,39515506	Gene ID= ENSG00000185437.13 TPM= 1.28 Transcript Type= protein_coding
chr21	41167801	41276597	41167801	41276597	+	ENST00000330333.10@BACE2	ENST00000330333.10	protein_coding	41167801,41226266,41237513,41241819,41243376,41245962,41250752,41257158,41275371	41168575,41226354,41237729,41241947,41243510,41246063,41250901,41257326,41276597	Gene ID= ENSG00000182240.15 TPM= 7.72 Transcript Type= protein_coding
chr21	41361943	41408943	41361943	41408943	+	ENST00000330714.7@MX2	ENST00000330714.7	protein_coding	41361943,41376836,41377789,41380017,41382410,41390565,41395587,41397613,41398897,41399196,41401970,41403267,41406744,41407991	41362055,41377155,41377981,41380151,41382564,41390703,41395785,41397691,41399019,41399337,41402128,41403343,41406998,41408943	Gene ID= ENSG00000183486.12 TPM= 2.9 Transcript Type= protein_coding
chr21	41426161	41459213	41426161	41459213	+	transcript838.chr21.nic@MX1	transcript838.chr21.nic	protein_coding	41426161,41427206,41427755,41430533,41432031,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528	41426263,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459213	Gene ID= ENSG00000157601.13 TPM= 2.41 Transcript Type= NA
chr21	41426167	41459214	41426167	41459214	+	ENST00000398598.7@MX1	ENST00000398598.7	protein_coding	41426167,41427206,41427755,41430533,41432050,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528	41426263,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459214	Gene ID= ENSG00000157601.13 TPM= 4.34 Transcript Type= protein_coding
chr21	41798225	41879473	41798225	41879473	-	ENST00000422911.5@PRDM15	ENST00000422911.5	protein_coding	41879270,41860327,41859592,41857176,41854566,41847090,41839623,41837934,41836468,41836113,41835437,41834505,41828166,41825960,41823318,41821903,41821067,41820095,41819582,41815705,41810753,41810154,41804534,41802712,41798225	41879473,41860372,41859685,41857329,41854818,41847191,41839853,41838063,41836649,41836207,41835524,41834564,41828333,41826054,41823449,41822037,41821230,41820174,41819701,41815836,41810836,41810329,41804614,41802921,41801722	Gene ID= ENSG00000141956.13 TPM= 4.83 Transcript Type= protein_coding
chr21	42219118	42297244	42219118	42297244	+	ENST00000398449.7@ABCG1	ENST00000398449.7	protein_coding	42219118,42225671,42271070,42273303,42276895,42282274,42284560,42285880,42287889,42288211,42290050,42291092,42291498,42294542,42296164	42219304,42225914,42271187,42273435,42276945,42282419,42284683,42285994,42288037,42288312,42290218,42291192,42291656,42294660,42297244	Gene ID= ENSG00000160179.18 TPM= 9.65 Transcript Type= protein_coding
chr21	42219118	42297244	42219118	42297244	+	ENST00000361802.6@ABCG1	ENST00000361802.6	protein_coding	42219118,42225671,42271070,42273303,42276895,42282274,42284560,42285880,42287889,42288211,42290050,42291092,42291498,42294542,42296164	42219304,42225914,42271187,42273435,42276945,42282419,42284683,42285994,42288073,42288312,42290218,42291192,42291656,42294660,42297244	Gene ID= ENSG00000160179.18 TPM= 13.51 Transcript Type= protein_coding
chr21	42513697	42581440	42513697	42581440	+	transcript852.chr21.nic@SLC37A1	transcript852.chr21.nic	protein_coding	42513697,42514631,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42513924,42514717,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 3.86 Transcript Type= NA
chr21	42513700	42581440	42513700	42581440	+	transcript855.chr21.nnic@SLC37A1	transcript855.chr21.nnic	protein_coding	42513700,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42513924,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 10.62 Transcript Type= NA
chr21	42513914	42581440	42513914	42581440	+	ENST00000352133.2@SLC37A1	ENST00000352133.2	protein_coding	42513914,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42514717,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 6.76 Transcript Type= protein_coding
chr21	42843094	42846592	42843094	42846592	-	transcript880.chr21.nnic@NA	transcript880.chr21.nnic	NA	42843094	42846592	Gene ID= novel_gene_chr21_881 TPM= 2.9 Transcript Type= NA
chr21	42843407	42879581	42843407	42879581	-	transcript863.chr21.nnic@WDR4	transcript863.chr21.nnic	protein_coding	42879407,42876702,42873551,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42848773,42847057,42843407	42879581,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242,42848741,42843628	Gene ID= ENSG00000160193.11 TPM= 1.93 Transcript Type= NA
chr21	42847659	42879581	42847659	42879581	-	transcript864.chr21.nnic@WDR4	transcript864.chr21.nnic	protein_coding	42879407,42876702,42873551,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42848901,42848515,42847659	42879581,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242,42848741,42848479	Gene ID= ENSG00000160193.11 TPM= 2.9 Transcript Type= NA
chr21	42848096	42879581	42848096	42879581	-	transcript866.chr21.nnic@WDR4	transcript866.chr21.nnic	protein_coding	42879407,42876702,42873603,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42848901,42848515,42848096	42879581,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242,42848741,42848479	Gene ID= ENSG00000160193.11 TPM= 2.41 Transcript Type= NA
chr21	42843094	42879531	42843094	42879531	-	ENST00000330317.6@WDR4	ENST00000330317.6	protein_coding	42879407,42876702,42873551,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42850041,42843094	42879531,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242,42843281	Gene ID= ENSG00000160193.11 TPM= 11.58 Transcript Type= protein_coding
chr21	42849226	42879555	42849226	42879555	-	ENST00000398208.2@WDR4	ENST00000398208.2	protein_coding	42879407,42876702,42873551,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42849226	42879555,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242	Gene ID= ENSG00000160193.11 TPM= 15.44 Transcript Type= protein_coding
chr21	42893272	42909100	42893272	42909100	+	transcript895.chr21.nnic@NDUFV3	transcript895.chr21.nnic	protein_coding	42893272,42908864	42893381,42909100	Gene ID= ENSG00000160194.17 TPM= 9.65 Transcript Type= NA
chr21	42893265	42909105	42893265	42909105	+	ENST00000354250.6@NDUFV3	ENST00000354250.6	protein_coding	42893265,42896927,42903182,42908864	42893381,42897047,42904276,42909105	Gene ID= ENSG00000160194.17 TPM= 66.61 Transcript Type= protein_coding
chr21	42974510	43033582	42974510	43033582	+	ENST00000291547.9@PKNOX1	ENST00000291547.9	protein_coding	42974510,43004326,43007491,43010053,43013068,43016908,43018133,43021303,43024871,43028702,43029890	42974664,43004432,43007618,43010224,43013238,43017007,43018230,43021431,43024947,43028874,43033582	Gene ID= ENSG00000160199.14 TPM= 4.83 Transcript Type= protein_coding
chr21	42974510	43033931	42974510	43033931	+	ENST00000432907.6@PKNOX1	ENST00000432907.6	protein_coding	42974510,43004326,43007491,43013068,43016908,43018133,43021303,43024871,43028702,43029890	42974664,43004432,43007618,43013238,43017007,43018230,43021431,43024947,43028874,43033931	Gene ID= ENSG00000160199.14 TPM= 1.93 Transcript Type= protein_coding
chr21	42975136	42976292	42975136	42976292	+	transcript899.chr21.nnic@NA	transcript899.chr21.nnic	NA	42975136	42976292	Gene ID= novel_gene_chr21_900 TPM= 3.86 Transcript Type= NA
chr21	43053191	43075870	43053191	43075870	-	transcript901.chr21.nic@CBS	transcript901.chr21.nic	protein_coding	43075770,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053862,43053191	43075870,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983,43053647	Gene ID= ENSG00000160200.17 TPM= 1.93 Transcript Type= NA
chr21	43053191	43075945	43053191	43075945	-	ENST00000398165.7@CBS	ENST00000398165.7	protein_coding	43075770,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053191	43075945,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983	Gene ID= ENSG00000160200.17 TPM= 5.31 Transcript Type= protein_coding
chr21	43053191	43076378	43053191	43076378	-	ENST00000352178.9@CBS	ENST00000352178.9	protein_coding	43076225,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053191	43076378,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983	Gene ID= ENSG00000160200.17 TPM= 1.45 Transcript Type= protein_coding
chr21	43092957	43107578	43092957	43107578	-	ENST00000398137.5@U2AF1	ENST00000398137.5	protein_coding	43107451,43104315,43101366,43100453,43095694,43095438,43094655,43094471,43092957	43107578,43104402,43101432,43100519,43095743,43095536,43094788,43094563,43093249	Gene ID= ENSG00000160201.11 TPM= 3.86 Transcript Type= protein_coding
chr21	43092956	43107587	43092956	43107587	-	ENST00000291552.8@U2AF1	ENST00000291552.8	protein_coding	43107451,43104315,43100453,43095694,43095438,43094655,43094471,43092956	43107587,43104402,43100519,43095743,43095536,43094788,43094563,43093249	Gene ID= ENSG00000160201.11 TPM= 52.61 Transcript Type= protein_coding
chr21	43092956	43107565	43092956	43107565	-	ENST00000380276.6@U2AF1	ENST00000380276.6	protein_coding	43107451,43104315,43101366,43095694,43095438,43094655,43094471,43092956	43107565,43104402,43101432,43095743,43095536,43094788,43094563,43093249	Gene ID= ENSG00000160201.11 TPM= 11.1 Transcript Type= protein_coding
chr21	43414515	43427128	43414515	43427128	-	ENST00000270162.6@SIK1	ENST00000270162.6	protein_coding	43427010,43426023,43425407,43421974,43421638,43421243,43421010,43420234,43419859,43419353,43419021,43418260,43417543,43414515	43427128,43426192,43425523,43422037,43421799,43421367,43421133,43420457,43420005,43419478,43419237,43418541,43417774,43417117	Gene ID= ENSG00000142178.7 TPM= 10.62 Transcript Type= protein_coding
chr21	43659518	43687569	43659518	43687569	+	transcript914.chr21.nic@RRP1B	transcript914.chr21.nic	protein_coding	43659518,43669884,43672308,43673870,43674636,43675034,43676272,43676733,43683279,43684553,43685770,43686804,43687516	43659794,43669966,43672365,43673955,43674697,43675163,43676336,43676914,43683373,43684650,43685789,43686935,43687569	Gene ID= ENSG00000160208.12 TPM= 14.48 Transcript Type= NA
chr21	43659548	43696079	43659548	43696079	+	ENST00000340648.5@RRP1B	ENST00000340648.5	protein_coding	43659548,43669884,43672308,43673870,43674636,43675034,43676272,43676733,43683279,43684553,43685770,43686804,43687516,43690288,43691439,43693190	43659794,43669966,43672365,43673955,43674697,43675163,43676336,43676914,43683373,43684650,43685789,43686935,43688240,43690440,43691502,43696079	Gene ID= ENSG00000160208.12 TPM= 29.92 Transcript Type= protein_coding
chr21	43789513	43805293	43789513	43805293	+	ENST00000497547.1@RRP1	ENST00000497547.1	protein_coding	43789513,43791350,43792672,43793319,43795189,43797422,43797631,43797907,43799570,43800517,43800862,43802274,43803512	43789762,43791432,43792729,43793404,43795250,43797551,43797695,43798100,43799649,43800614,43800881,43802387,43805293	Gene ID= ENSG00000160214.12 TPM= 101.36 Transcript Type= protein_coding
chr21	43865122	43984673	43865122	43984673	+	transcript942.chr21.nnic@AGPAT3	transcript942.chr21.nnic	protein_coding	43865122,43882504,43903957,43959634,43967946,43969118,43970653,43971388,43978046,43980989,43982304	43865345,43882615,43904019,43959859,43968115,43969279,43970806,43971490,43978121,43981187,43984673	Gene ID= ENSG00000160216.18 TPM= 5.79 Transcript Type= NA
chr21	43925008	43986536	43925008	43986536	+	ENST00000398063.6@AGPAT3	ENST00000398063.6	protein_coding	43925008,43959634,43967946,43969118,43970653,43971388,43978046,43980989,43982304	43925451,43959859,43968115,43969279,43970806,43971490,43978121,43981187,43986536	Gene ID= ENSG00000160216.18 TPM= 49.23 Transcript Type= protein_coding
chr21	43865116	43973650	43865116	43973650	+	transcript960.chr21.nnic@AGPAT3	transcript960.chr21.nnic	protein_coding	43865116,43903957,43959634,43967946,43969118,43970653,43971388,43971980	43865345,43904019,43959859,43968115,43969279,43970806,43971490,43973650	Gene ID= ENSG00000160216.18 TPM= 7.24 Transcript Type= NA
chr21	43865156	43971035	43865156	43971035	+	transcript963.chr21.nic@AGPAT3	transcript963.chr21.nic	protein_coding	43865156,43903957,43959634,43967946,43969118,43970653	43865345,43904019,43959859,43968115,43969279,43971035	Gene ID= ENSG00000160216.18 TPM= 1.93 Transcript Type= NA
chr21	44012310	44052401	44012310	44052401	+	transcript973.chr21.nic@TRAPPC10	transcript973.chr21.nic	protein_coding	44012310,44032091,44037792,44052280	44012560,44032172,44037927,44052401	Gene ID= ENSG00000160218.12 TPM= 1.93 Transcript Type= NA
chr21	44107290	44131181	44107290	44131181	+	ENST00000291576.11@PWP2	ENST00000291576.11	protein_coding	44107290,44108984,44113753,44114179,44114625,44115264,44115691,44117820,44118763,44119387,44120348,44120631,44120952,44122177,44124580,44126011,44126900,44127932,44128247,44128552,44130597	44107434,44109096,44113847,44114278,44114768,44115399,44115920,44117963,44118833,44119523,44120496,44120778,44121102,44122357,44124727,44126119,44126965,44128150,44128397,44128626,44131181	Gene ID= ENSG00000241945.7 TPM= 8.69 Transcript Type= protein_coding
chr21	44133605	44145723	44133605	44145723	+	ENST00000291577.10@C21orf33	ENST00000291577.10	protein_coding	44133605,44134102,44136060,44137177,44140250,44143205,44144821	44133838,44134154,44136173,44137296,44140342,44143361,44145723	Gene ID= ENSG00000160221.16 TPM= 27.99 Transcript Type= protein_coding
chr21	44323669	44327376	44323669	44327376	+	transcript985.chr21.nic@PFKL	transcript985.chr21.nic	protein_coding	44323669,44324491,44324856,44325153,44325961,44326159,44326715	44323918,44324655,44324917,44325264,44326060,44326264,44327376	Gene ID= ENSG00000141959.16 TPM= 5.31 Transcript Type= NA
chr21	44300051	44327376	44300051	44327376	+	ENST00000349048.8@PFKL	ENST00000349048.8	protein_coding	44300051,44306681,44311006,44312105,44312978,44313638,44313913,44316244,44316432,44318470,44319351,44320084,44321729,44322133,44322962,44323766,44324491,44324856,44325153,44325961,44326159,44326715	44300190,44306754,44311083,44312294,44313143,44313682,44314021,44316339,44316524,44318595,44319415,44320147,44321875,44322203,44323049,44323918,44324655,44324917,44325264,44326060,44326264,44327376	Gene ID= ENSG00000141959.16 TPM= 84.46 Transcript Type= protein_coding
chr21	44328944	44339402	44328944	44339402	-	ENST00000339818.8@C21orf2	ENST00000339818.8	protein_coding	44339118,44337649,44335758,44333033,44331843,44330823,44328944	44339402,44337667,44335804,44333262,44332014,44330919,44330326	Gene ID= ENSG00000160226.15 TPM= 2.9 Transcript Type= protein_coding
chr21	44329891	44334870	44329891	44334870	-	transcript989.chr21.nic@C21orf2	transcript989.chr21.nic	protein_coding	44333033,44331843,44330823,44329891	44334870,44332014,44330919,44330326	Gene ID= ENSG00000160226.15 TPM= 1.93 Transcript Type= NA
chr21	44329891	44339402	44329891	44339402	-	ENST00000325223.7@C21orf2	ENST00000325223.7	protein_coding	44339118,44337649,44335758,44333033,44331843,44330823,44329891	44339402,44337667,44335804,44333262,44332014,44330916,44330326	Gene ID= ENSG00000160226.15 TPM= 7.72 Transcript Type= protein_coding
chr21	44768580	44802019	44768580	44802019	-	ENST00000345496.6@UBE2G2	ENST00000345496.6	protein_coding	44801706,44788060,44787920,44777299,44773547,44768580	44802019,44788095,44787965,44777417,44773687,44771489	Gene ID= ENSG00000184787.18 TPM= 22.2 Transcript Type= protein_coding
chr21	44805617	44818129	44805617	44818129	-	ENST00000332859.10@SUMO3	ENST00000332859.10	protein_coding	44817948,44813976,44809047,44805617	44818129,44814104,44809118,44807040	Gene ID= ENSG00000184900.15 TPM= 94.6 Transcript Type= protein_coding
chr21	44818186	44820511	44818186	44820511	+	transcript1005.chr21.nnic@NA	transcript1005.chr21.nnic	NA	44818186	44820511	Gene ID= novel_gene_chr21_1006 TPM= 1.93 Transcript Type= NA
chr21	44849585	44873837	44849585	44873837	-	ENST00000330938.7@PTTG1IP	ENST00000330938.7	protein_coding	44873502,44865395,44861163,44856193,44855210,44849585	44873837,44865447,44861271,44856364,44855256,44851627	Gene ID= ENSG00000183255.11 TPM= 130.8 Transcript Type= protein_coding
chr21	44849585	44873738	44849585	44873738	-	transcript1013.chr21.nic@PTTG1IP	transcript1013.chr21.nic	protein_coding	44873502,44865395,44856193,44855210,44849585	44873738,44865447,44856364,44855256,44851627	Gene ID= ENSG00000183255.11 TPM= 32.34 Transcript Type= NA
chr21	44873869	44875805	44873869	44875805	+	transcript1014.chr21.nnic@NA	transcript1014.chr21.nnic	NA	44873869	44875805	Gene ID= novel_gene_chr21_1015 TPM= 5.79 Transcript Type= NA
chr21	44885953	44928873	44885953	44928873	-	ENST00000397850.6@ITGB2	ENST00000397850.6	protein_coding	44928654,44920821,44910725,44910284,44906915,44903365,44901492,44900320,44899067,44894971,44893404,44891809,44889978,44889276,44888693,44886736,44885953	44928873,44921050,44910785,44910372,44907095,44903535,44901733,44900475,44899162,44895060,44893544,44891996,44890222,44889495,44888895,44886902,44886430	Gene ID= ENSG00000160255.17 TPM= 11.58 Transcript Type= protein_coding
chr21	44940012	44976989	44940012	44976989	+	ENST00000397826.7@FAM207A	ENST00000397826.7	protein_coding	44940012,44943684,44960100,44967034,44973197,44976680	44940186,44943792,44960168,44967181,44973265,44976989	Gene ID= ENSG00000160256.12 TPM= 12.07 Transcript Type= protein_coding
chr21	44940010	44976989	44940010	44976989	+	ENST00000291634.10@FAM207A	ENST00000291634.10	protein_coding	44940010,44943684,44960100,44967034,44973197,44976680	44940186,44943837,44960168,44967181,44973265,44976989	Gene ID= ENSG00000160256.12 TPM= 10.14 Transcript Type= protein_coding
chr21	45074565	45147339	45074565	45147339	+	transcript1039.chr21.nnic@ADARB1	transcript1039.chr21.nnic	protein_coding	45074565,45128402,45143142,45144631	45074793,45128573,45143231,45147339	Gene ID= ENSG00000197381.15 TPM= 1.93 Transcript Type= NA
chr21	45074600	45226560	45074600	45226560	+	ENST00000389863.8@ADARB1	ENST00000389863.8	protein_coding	45074600,45128402,45171610,45175730,45180330,45182585,45183362,45184474,45184923,45204555,45220836,45222018,45225547	45074793,45128573,45171684,45176664,45180444,45182753,45183510,45184593,45185091,45204736,45221014,45222107,45226560	Gene ID= ENSG00000197381.15 TPM= 1.93 Transcript Type= protein_coding
chr21	45263928	45287898	45263928	45287898	-	ENST00000349485.9@POFUT2	ENST00000349485.9	protein_coding	45287741,45285678,45283383,45282349,45278103,45277017,45269839,45267590,45263928	45287898,45285928,45283527,45282459,45278169,45277142,45270019,45267713,45265635	Gene ID= ENSG00000186866.16 TPM= 8.69 Transcript Type= protein_coding
chr21	45405137	45513720	45405137	45513720	+	ENST00000400337.6@COL18A1	ENST00000400337.6	protein_coding	45405137,45405379,45468242,45473895,45475476,45476351,45477411,45477750,45478327,45479902,45480070,45480467,45480700,45481963,45482795,45486861,45487447,45488418,45489486,45490275,45490836,45491225,45492535,45492687,45493163,45493501,45494545,45494862,45495358,45496500,45497050,45497599,45504011,45504416,45505134,45505358,45505838,45507561,45509356,45510064,45511111,45512188	45405241,45405473,45468786,45473981,45475535,45476480,45477487,45477965,45478353,45479964,45480156,45480520,45480858,45482025,45482821,45486992,45487509,45488444,45489521,45490346,45490871,45491314,45492564,45492713,45493225,45493575,45494571,45494915,45495432,45496568,45497092,45497661,45504054,45504556,45505278,45505431,45505966,45507593,45509601,45510261,45511226,45513720	Gene ID= ENSG00000182871.14 TPM= 26.06 Transcript Type= protein_coding
chr21	45981737	46005050	45981737	46005050	+	ENST00000361866.7@COL6A1	ENST00000361866.7	protein_coding	45981737,45982634,45984269,45986526,45986944,45987155,45987499,45987610,45989084,45989608,45989752,45990258,45990378,45990773,45990979,45992010,45992164,45992363,45992748,45994167,45997421,45997700,45998121,45998398,45998897,45999153,45999657,46000331,46000759,46001253,46001961,46002218,46002527,46003120,46003391	45981947,45982763,45984469,45986685,45987072,45987175,45987519,45987654,45989137,45989652,45989778,45990284,45990422,45990826,45991041,45992072,45992217,45992398,45992810,45994229,45997483,45997762,45998171,45998433,45998959,45999218,45999692,46000367,46000767,46001386,46002070,46002401,46002710,46003149,46005050	Gene ID= ENSG00000142156.14 TPM= 92.67 Transcript Type= protein_coding
chr21	45981769	46004101	45981769	46004101	+	ENST00000612273.1@COL6A1	ENST00000612273.1	protein_coding	45981769,45982634,45984269,45986526,45986944,45987155,45987499,45987610,45989084,45989608,45989752,45990258,45990378,45990773,45990979,45992010,45992164,45992363,45992748,45994167,45997421,45997700,45998121,45998398,45998897,45999153,45999657,46000331,46001253,46001961,46002218,46002527,46003120,46003391	45981947,45982763,45984469,45986685,45987072,45987175,45987519,45987654,45989137,45989652,45989778,45990284,45990422,45990826,45991041,45992072,45992217,45992398,45992810,45994229,45997483,45997762,45998171,45998433,45998959,45999218,45999692,46000370,46001386,46002070,46002401,46002710,46003149,46004101	Gene ID= ENSG00000142156.14 TPM= 46.33 Transcript Type= protein_coding
chr21	46098108	46129808	46098108	46129808	+	transcript1070.chr21.nic@COL6A2	transcript1070.chr21.nic	protein_coding	46098108,46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46129196	46098173,46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46129808	Gene ID= ENSG00000142173.14 TPM= 19.62 Transcript Type= NA
chr21	46098097	46132849	46098097	46132849	+	ENST00000300527.8@COL6A2	ENST00000300527.8	protein_coding	46098097,46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46131954	46098173,46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46132849	Gene ID= ENSG00000142173.14 TPM= 150.11 Transcript Type= protein_coding
chr21	46098108	46132849	46098108	46132849	+	transcript1072.chr21.nnic@COL6A2	transcript1072.chr21.nnic	protein_coding	46098108,46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125465,46125785,46126503,46131954	46098173,46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125617,46126237,46126541,46132849	Gene ID= ENSG00000142173.14 TPM= 11.9 Transcript Type= NA
chr21	46111450	46129808	46111450	46129808	+	ENST00000397763.5@COL6A2	ENST00000397763.5	protein_coding	46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46129196	46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46129808	Gene ID= ENSG00000142173.14 TPM= 18.51 Transcript Type= protein_coding
chr21	46129342	46132849	46129342	46132849	+	transcript1079.chr21.nnic@NA	transcript1079.chr21.nnic	NA	46129342	46132849	Gene ID= novel_gene_chr21_1080 TPM= 11.27 Transcript Type= NA
chr21	46161148	46184476	46161148	46184476	-	ENST00000330205.10@SPATC1L	ENST00000330205.10	protein_coding	46184356,46168308,46161916,46161148	46184476,46168658,46162067,46161705	Gene ID= ENSG00000160284.14 TPM= 4.83 Transcript Type= protein_coding
chr21	46188446	46228824	46188446	46228824	-	ENST00000397728.7@LSS	ENST00000397728.7	protein_coding	46228732,46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46188446	46228824,46228599,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235	Gene ID= ENSG00000160285.14 TPM= 10.14 Transcript Type= protein_coding
chr21	46189124	46228824	46189124	46228824	-	ENST00000457828.6@LSS	ENST00000457828.6	protein_coding	46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46189124	46228824,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235	Gene ID= ENSG00000160285.14 TPM= 41.03 Transcript Type= protein_coding
chr21	46235133	46286265	46235133	46286265	-	transcript1090.chr21.nic@MCM3AP	transcript1090.chr21.nic	protein_coding	46285699,46284068,46283615,46280497,46279993,46277527,46275186,46273388,46272561,46270401,46266982,46265925,46265321,46264117,46261280,46260793,46258939,46256789,46254776,46254392,46251529,46246628,46246307,46244807,46243465,46242802,46240811,46236829,46235133	46286265,46285394,46283838,46280575,46280137,46277717,46275325,46273585,46272829,46270563,46267142,46266166,46265523,46264217,46261411,46260906,46259091,46256986,46254844,46254526,46251682,46246886,46246404,46245197,46243722,46242931,46241017,46236979,46235426	Gene ID= ENSG00000160294.10 TPM= 52.13 Transcript Type= NA
chr21	46286337	46297751	46286337	46297751	+	ENST00000397701.8@YBEY	ENST00000397701.8	protein_coding	46286337,46286870,46291334,46296162,46297539	46286415,46287123,46291462,46296230,46297751	Gene ID= ENSG00000182362.13 TPM= 5.79 Transcript Type= protein_coding
chr21	46292550	46294788	46292550	46294788	+	transcript1103.chr21.nnic@NA	transcript1103.chr21.nnic	NA	46292550	46294788	Gene ID= novel_gene_chr21_1104 TPM= 5.79 Transcript Type= NA
chr21	46348165	46445769	46348165	46445769	+	transcript1106.chr21.nnic@PCNT	transcript1106.chr21.nnic	protein_coding	46348165,46349012,46349684,46351429,46353104,46353987,46355452,46356974,46363480,46366584,46381694,46385832,46388742,46389199,46390670,46391164,46394504,46397265,46398014,46398235,46399590,46401551,46402331,46411189,46412837,46416069,46418204,46421970,46425831,46427622,46428395,46430010,46430507,46431529,46435904,46436979,46438164,46440083,46440855,46442497,46443810,46444694,46445284	46348325,46349186,46349820,46351540,46353326,46354068,46355626,46357191,46363934,46367139,46381840,46385983,46388884,46389431,46390832,46391376,46394536,46397494,46398130,46398255,46399796,46401721,46402483,46412067,46412992,46416839,46418306,46422124,46425971,46427795,46428590,46430232,46430657,46431978,46436148,46437081,46438337,46440202,46441084,46442573,46443948,46444821,46445769	Gene ID= ENSG00000160299.16 TPM= 71.01 Transcript Type= NA
chr21	46348165	46389646	46348165	46389646	+	transcript1140.chr21.nic@PCNT	transcript1140.chr21.nic	protein_coding	46348165,46349012,46349684,46351429,46353104,46353987,46355452,46356974,46363480,46366584,46381694,46385832,46388742,46389199	46348325,46349186,46349820,46351540,46353326,46354068,46355626,46357191,46363934,46367139,46381840,46385983,46388884,46389646	Gene ID= ENSG00000160299.16 TPM= 28.28 Transcript Type= NA
chr21	46348219	46389651	46348219	46389651	+	transcript1144.chr21.nic@PCNT	transcript1144.chr21.nic	protein_coding	46348219,46349012,46349684,46351429,46353104,46353987,46355452,46356974,46363480,46366584,46381694,46385832,46388742	46348325,46349186,46349820,46351540,46353326,46354068,46355626,46357191,46363934,46367139,46381840,46385983,46389651	Gene ID= ENSG00000160299.16 TPM= 11.44 Transcript Type= NA
chr21	46398805	46419986	46398805	46419986	+	transcript1167.chr21.nic@PCNT	transcript1167.chr21.nic	protein_coding	46398805,46401551,46402331,46411189,46412837,46416069,46418204	46399796,46401721,46402483,46412067,46412992,46416839,46419986	Gene ID= ENSG00000160299.16 TPM= 8.21 Transcript Type= NA
chr21	46444648	46445769	46444648	46445769	+	transcript1183.chr21.nic@PCNT	transcript1183.chr21.nic	protein_coding	46444648,46445284	46444821,46445769	Gene ID= ENSG00000160299.16 TPM= 46.33 Transcript Type= NA
chr21	46324122	46445769	46324122	46445769	+	ENST00000359568.9@PCNT	ENST00000359568.9	protein_coding	46324122,46326377,46334397,46346128,46346743,46347457,46349012,46349684,46351429,46353104,46353987,46355452,46356974,46363480,46366584,46381694,46385832,46388742,46389199,46390670,46391164,46397265,46398014,46398235,46399590,46401551,46402331,46411189,46412837,46416069,46418204,46421970,46425831,46427622,46428395,46430010,46430507,46431529,46435904,46436979,46438164,46440083,46440855,46442497,46443810,46444694,46445284	46324282,46326589,46334768,46346208,46346998,46347512,46349186,46349820,46351540,46353326,46354068,46355626,46357191,46363934,46367139,46381840,46385983,46388884,46389431,46390832,46391376,46397494,46398130,46398255,46399796,46401721,46402483,46412067,46412992,46416839,46418306,46422124,46425971,46427795,46428590,46430232,46430657,46432215,46436148,46437081,46438337,46440202,46441084,46442573,46443948,46444821,46445769	Gene ID= ENSG00000160299.16 TPM= 93.47 Transcript Type= protein_coding
chr21	46348244	46350183	46348244	46350183	+	transcript1184.chr21.nnic@NA	transcript1184.chr21.nnic	NA	46348244	46350183	Gene ID= novel_gene_chr21_1185 TPM= 3.86 Transcript Type= NA
chr21	46350129	46353082	46350129	46353082	-	transcript1192.chr21.nnic@NA	transcript1192.chr21.nnic	NA	46350129	46353082	Gene ID= novel_gene_chr21_1193 TPM= 1.93 Transcript Type= NA
chr21	46405651	46407585	46405651	46407585	-	transcript1194.chr21.nnic@NA	transcript1194.chr21.nnic	NA	46405651	46407585	Gene ID= novel_gene_chr21_1195 TPM= 1.93 Transcript Type= NA
chr21	46413996	46414932	46413996	46414932	-	transcript1188.chr21.nnic@NA	transcript1188.chr21.nnic	NA	46413996	46414932	Gene ID= novel_gene_chr21_1189 TPM= 2.9 Transcript Type= NA
chr21	46426071	46427720	46426071	46427720	-	transcript1186.chr21.nnic@NA	transcript1186.chr21.nnic	NA	46426071	46427720	Gene ID= novel_gene_chr21_1187 TPM= 69.5 Transcript Type= NA
chr21	46457907	46458702	46457907	46458702	-	transcript1196.chr21.nnic@NA	transcript1196.chr21.nnic	NA	46457907	46458702	Gene ID= novel_gene_chr21_1197 TPM= 1.93 Transcript Type= NA
chr21	46458879	46546304	46458879	46546304	+	transcript1201.chr21.nic@DIP2A	transcript1201.chr21.nic	protein_coding	46458879,46484757,46490600,46496988,46498582,46504361,46509257,46511417,46529092,46532127,46533524,46534004,46534585,46537224,46537446,46538483,46539877,46541756,46545137,46545881	46459222,46484828,46490719,46497107,46498833,46504489,46509376,46511614,46529183,46532237,46533647,46534113,46534687,46537288,46537539,46538602,46539991,46541895,46545273,46546304	Gene ID= ENSG00000160305.17 TPM= 2.9 Transcript Type= NA
chr21	46635167	46664951	46635167	46664951	+	ENST00000355680.7@PRMT2	ENST00000355680.7	protein_coding	46635167,46636439,46636896,46643535,46644306,46648458,46649575,46658745,46660833,46661800,46663383,46664295	46635763,46636547,46636990,46643639,46644488,46648619,46649739,46658920,46660962,46661936,46663554,46664951	Gene ID= ENSG00000160310.17 TPM= 10.14 Transcript Type= protein_coding
chr21	46635615	46664951	46635615	46664951	+	ENST00000397638.6@PRMT2	ENST00000397638.6	protein_coding	46635615,46636896,46643535,46644306,46648458,46649575,46658745,46660833,46661800,46663383,46664295	46635763,46636990,46643639,46644488,46648619,46649739,46658920,46660962,46661936,46663554,46664951	Gene ID= ENSG00000160310.17 TPM= 4.34 Transcript Type= protein_coding
chr21	46635673	46661270	46635673	46661270	+	transcript1216.chr21.nic@PRMT2	transcript1216.chr21.nic	protein_coding	46635673,46636439,46636896,46643535,46644306,46648458,46649575,46658745,46660833	46635763,46636547,46636990,46643639,46644488,46648619,46649739,46658920,46661270	Gene ID= ENSG00000160310.17 TPM= 2.9 Transcript Type= NA
chr21	46635675	46652318	46635675	46652318	+	transcript1217.chr21.nic@PRMT2	transcript1217.chr21.nic	protein_coding	46635675,46636439,46636896,46643535,46644306,46648458,46649575,46651806	46635763,46636547,46636990,46643639,46644488,46648619,46649739,46652318	Gene ID= ENSG00000160310.17 TPM= 1.93 Transcript Type= NA
chr21	46635615	46660144	46635615	46660144	+	transcript1221.chr21.nic@PRMT2	transcript1221.chr21.nic	protein_coding	46635615,46636439,46636896,46643535,46644306,46648458,46649575,46658745	46635763,46636547,46636990,46643639,46644488,46648619,46649739,46660144	Gene ID= ENSG00000160310.17 TPM= 9.65 Transcript Type= NA
chr21	46635615	46649888	46635615	46649888	+	transcript1223.chr21.nic@PRMT2	transcript1223.chr21.nic	protein_coding	46635615,46636439,46636896,46643535,46644306,46648458,46649575	46635763,46636547,46636990,46643639,46644488,46648619,46649888	Gene ID= ENSG00000160310.17 TPM= 12.55 Transcript Type= NA
chr21	46635669	46660144	46635669	46660144	+	transcript1224.chr21.nic@PRMT2	transcript1224.chr21.nic	protein_coding	46635669,46636896,46643535,46644306,46648458,46649575,46658745	46635763,46636990,46643639,46644488,46648619,46649739,46660144	Gene ID= ENSG00000160310.17 TPM= 1.93 Transcript Type= NA
chr22	17084959	17115693	17084959	17115693	+	ENST00000319363.10@IL17RA	ENST00000319363.10	protein_coding	17084959,17097062,17097797,17098775,17100355,17101996,17102139,17103494,17104726,17105591,17105853,17107727,17108307	17085229,17097086,17097943,17098887,17100481,17102043,17102302,17103577,17104810,17105602,17105954,17107768,17115693	Gene ID= ENSG00000177663.13 TPM= 1.93 Transcript Type= protein_coding
chr22	17137520	17159298	17137520	17159298	-	transcript22.chr22.nnic@HDHD5	transcript22.chr22.nnic	protein_coding	17159126,17149542,17148448,17145024,17143098,17141059,17138550,17137520	17159298,17149745,17148560,17145117,17143131,17141233,17138738,17138376	Gene ID= ENSG00000069998.12 TPM= 4.63 Transcript Type= NA
chr22	17137522	17159206	17137522	17159206	-	transcript26.chr22.nic@HDHD5	transcript26.chr22.nic	protein_coding	17158457,17149542,17148448,17145024,17143098,17141059,17138550,17137522	17159206,17149745,17148560,17145117,17143131,17141233,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 8.93 Transcript Type= NA
chr22	17137522	17159257	17137522	17159257	-	transcript33.chr22.nnic@HDHD5	transcript33.chr22.nnic	protein_coding	17159126,17148448,17145024,17143098,17141059,17138550,17137522	17159257,17148560,17145117,17143131,17141233,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 3.91 Transcript Type= NA
chr22	17137520	17159277	17137520	17159277	-	ENST00000336737.8@HDHD5	ENST00000336737.8	protein_coding	17159126,17149542,17148448,17145024,17143098,17141059,17138550,17137520	17159277,17149745,17148560,17145117,17143131,17141233,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 109.85 Transcript Type= protein_coding
chr22	17157273	17159277	17157273	17159277	-	transcript35.chr22.nnic@NA	transcript35.chr22.nnic	NA	17157273	17159277	Gene ID= novel_gene_chr22_36 TPM= 2.9 Transcript Type= NA
chr22	17369657	17539189	17369657	17539189	+	transcript38.chr22.nic@CECR2	transcript38.chr22.nic	protein_coding	17369657,17477588,17497403,17499410,17500631,17503082,17504847,17511813,17524118,17537103,17538520,17538640,17538993	17369909,17477682,17497586,17499549,17500735,17503131,17505016,17511896,17524271,17537232,17538557,17538731,17539189	Gene ID= ENSG00000099954.18 TPM= 2.9 Transcript Type= NA
chr22	17369472	17539189	17369472	17539189	+	transcript40.chr22.nnic@CECR2	transcript40.chr22.nnic	protein_coding	17369472,17477588,17497403,17499410,17500631,17503082,17504847,17524118,17537103,17538520,17538640,17538993	17369909,17477682,17497586,17499549,17500735,17503131,17505016,17524271,17537232,17538557,17538731,17539189	Gene ID= ENSG00000099954.18 TPM= 1.93 Transcript Type= NA
chr22	17563439	17590994	17563439	17590994	+	ENST00000327451.10@SLC25A18	ENST00000327451.10	protein_coding	17563439,17569924,17579745,17581037,17581358,17582563,17583416,17587136,17587925,17589590,17590095	17563713,17569986,17579964,17581159,17581413,17582653,17583534,17587301,17588079,17589665,17590994	Gene ID= ENSG00000182902.13 TPM= 1.45 Transcript Type= protein_coding
chr22	17563450	17590881	17563450	17590881	+	ENST00000399813.1@SLC25A18	ENST00000399813.1	protein_coding	17563450,17579745,17581037,17581358,17582563,17583416,17587136,17587925,17589590,17590095	17563713,17579964,17581159,17581413,17582653,17583534,17587301,17588079,17589665,17590881	Gene ID= ENSG00000182902.13 TPM= 1.45 Transcript Type= protein_coding
chr22	17592136	17628818	17592136	17628818	-	ENST00000253413.9@ATP6V1E1	ENST00000253413.9	protein_coding	17628603,17619461,17613211,17612812,17601092,17600027,17598194,17594529,17592136	17628818,17619526,17613320,17612878,17601181,17600095,17598288,17594616,17592736	Gene ID= ENSG00000131100.12 TPM= 145.76 Transcript Type= protein_coding
chr22	17633092	17634547	17633092	17634547	-	transcript55.chr22.nnic@NA	transcript55.chr22.nnic	NA	17633092	17634547	Gene ID= novel_gene_chr22_56 TPM= 1.93 Transcript Type= NA
chr22	17638590	17728721	17638590	17728721	+	ENST00000317582.9@BCL2L13	ENST00000317582.9	protein_coding	17638590,17655662,17683214,17688986,17696141,17702243,17726677	17638886,17655832,17683321,17689142,17696210,17702386,17728721	Gene ID= ENSG00000099968.17 TPM= 16.65 Transcript Type= protein_coding
chr22	17638584	17730855	17638584	17730855	+	ENST00000418951.6@BCL2L13	ENST00000418951.6	protein_coding	17638584,17655662,17683214,17688986,17702243,17726677	17638886,17655832,17683321,17689142,17702386,17730855	Gene ID= ENSG00000099968.17 TPM= 4.1 Transcript Type= protein_coding
chr22	17638584	17730855	17638584	17730855	+	ENST00000543133.5@BCL2L13	ENST00000543133.5	protein_coding	17638584,17655662,17683214,17696141,17702243,17726677	17638886,17655832,17683321,17696210,17702386,17730855	Gene ID= ENSG00000099968.17 TPM= 2.17 Transcript Type= protein_coding
chr22	17638584	17730855	17638584	17730855	+	ENST00000618481.4@BCL2L13	ENST00000618481.4	protein_coding	17638584,17683214,17688986,17696141,17702243,17726677	17638886,17683321,17689142,17696210,17702386,17730855	Gene ID= ENSG00000099968.17 TPM= 1.21 Transcript Type= protein_coding
chr22	17638699	17703771	17638699	17703771	+	transcript82.chr22.nic@BCL2L13	transcript82.chr22.nic	protein_coding	17638699,17655662,17683214,17688986,17702243	17638886,17655832,17683321,17689142,17703771	Gene ID= ENSG00000099968.17 TPM= 6.76 Transcript Type= NA
chr22	17638584	17730855	17638584	17730855	+	ENST00000337612.9@BCL2L13	ENST00000337612.9	protein_coding	17638584,17655662,17683214,17702243,17726677	17638886,17655832,17683321,17702386,17730855	Gene ID= ENSG00000099968.17 TPM= 3.14 Transcript Type= protein_coding
chr22	17638772	17703733	17638772	17703733	+	ENST00000493680.5@BCL2L13	ENST00000493680.5	protein_coding	17638772,17655662,17683214,17688986,17696141,17702243	17638886,17655832,17683321,17689142,17696210,17703733	Gene ID= ENSG00000099968.17 TPM= 11.58 Transcript Type= protein_coding
chr22	17731253	17735219	17731253	17735219	+	transcript96.chr22.nnic@NA	transcript96.chr22.nnic	NA	17731253	17735219	Gene ID= novel_gene_chr22_97 TPM= 9.65 Transcript Type= NA
chr22	17787652	17817917	17787652	17817917	-	transcript102.chr22.nic@MICAL3	transcript102.chr22.nic	protein_coding	17817311,17816690,17810703,17808844,17803811,17791202,17790998,17787652	17817917,17816784,17810813,17808937,17803861,17791301,17791071,17790916	Gene ID= ENSG00000243156.7 TPM= 10.62 Transcript Type= NA
chr22	18077923	18105396	18077923	18105396	+	ENST00000329627.11@PEX26	ENST00000329627.11	protein_coding	18077923,18078296,18079874,18083437,18085112,18087972	18078047,18078606,18080014,18083732,18085258,18105396	Gene ID= ENSG00000215193.12 TPM= 2.9 Transcript Type= protein_coding
chr22	18080998	18083142	18080998	18083142	-	transcript128.chr22.nnic@NA	transcript128.chr22.nnic	NA	18080998	18083142	Gene ID= novel_gene_chr22_129 TPM= 1.93 Transcript Type= NA
chr22	18110687	18131154	18110687	18131154	+	ENST00000316027.10@TUBA8	ENST00000316027.10	protein_coding	18110687,18121479,18124156,18126354,18130843	18110839,18121701,18124304,18127034,18131154	Gene ID= ENSG00000183785.14 TPM= 4.34 Transcript Type= protein_coding
chr22	18110793	18131731	18110793	18131731	+	ENST00000330423.7@TUBA8	ENST00000330423.7	protein_coding	18110793,18121479,18124156,18126354,18130843	18110868,18121701,18124304,18127034,18131731	Gene ID= ENSG00000183785.14 TPM= 9.17 Transcript Type= protein_coding
chr22	18149899	18177397	18149899	18177397	+	ENST00000215794.7@USP18	ENST00000215794.7	protein_coding	18149899,18157558,18160172,18161790,18167255,18167890,18169844,18170753,18173150,18173793,18176772	18150222,18157820,18160268,18161935,18167334,18168036,18169939,18170920,18173281,18173842,18177397	Gene ID= ENSG00000184979.9 TPM= 7.72 Transcript Type= protein_coding
chr22	18904739	18906434	18904739	18906434	-	transcript189.chr22.nnic@NA	transcript189.chr22.nnic	NA	18904739	18906434	Gene ID= novel_gene_chr22_190 TPM= 1.93 Transcript Type= NA
chr22	18906223	18912088	18906223	18912088	+	ENST00000331444.10@DGCR6	ENST00000331444.10	protein_coding	18906223,18906565,18910172,18910888,18911540	18906484,18906725,18910272,18911028,18912088	Gene ID= ENSG00000183628.12 TPM= 152.04 Transcript Type= protein_coding
chr22	18906318	18912088	18906318	18912088	+	transcript175.chr22.nic@DGCR6	transcript175.chr22.nic	protein_coding	18906318,18910172,18910888,18911540	18906725,18910272,18911028,18912088	Gene ID= ENSG00000183628.12 TPM= 20.75 Transcript Type= NA
chr22	18906351	18912082	18906351	18912082	+	ENST00000427407.5@DGCR6	ENST00000427407.5	protein_coding	18906351,18906565,18909980,18910172,18910888,18911540	18906484,18906725,18910098,18910272,18911028,18912082	Gene ID= ENSG00000183628.12 TPM= 6.92 Transcript Type= nonsense_mediated_decay
chr22	18906317	18908338	18906317	18908338	+	transcript185.chr22.nnic@NA	transcript185.chr22.nnic	NA	18906317	18908338	Gene ID= novel_gene_chr22_186 TPM= 1.93 Transcript Type= NA
chr22	18912781	18936326	18912781	18936326	-	transcript137.chr22.nnic@PRODH	transcript137.chr22.nnic	protein_coding	18936015,18930990,18925688,18925051,18923115,18922817,18922325,18920743,18919706,18919451,18918316,18916890,18913438,18912781	18936326,18931198,18925722,18925200,18923179,18922933,18922404,18921423,18919798,18919597,18918491,18916988,18913526,18913362	Gene ID= ENSG00000100033.16 TPM= 3.44 Transcript Type= NA
chr22	18912777	18936553	18912777	18936553	-	ENST00000610940.4@PRODH	ENST00000610940.4	protein_coding	18936390,18936015,18930990,18925688,18925051,18923115,18922817,18922325,18921342,18919706,18919451,18918316,18916890,18913438,18912777	18936553,18936327,18931198,18925722,18925200,18923179,18922933,18922404,18921423,18919798,18919597,18918491,18916988,18913526,18913362	Gene ID= ENSG00000100033.16 TPM= 70.74 Transcript Type= protein_coding
chr22	18912781	18936296	18912781	18936296	-	ENST00000420436.5@PRODH	ENST00000420436.5	protein_coding	18936170,18930990,18925688,18925051,18923115,18922817,18922325,18921342,18919706,18919451,18918316,18916890,18913438,18912781	18936296,18931181,18925722,18925200,18923179,18922933,18922404,18921423,18919798,18919597,18918491,18916988,18913526,18913362	Gene ID= ENSG00000100033.16 TPM= 6.06 Transcript Type= protein_coding
chr22	18912781	18927172	18912781	18927172	-	transcript148.chr22.nnic@PRODH	transcript148.chr22.nnic	protein_coding	18926894,18926039,18925688,18925051,18922817,18922325,18921342,18919706,18919451,18918316,18916890,18913438,18912781	18927172,18926299,18925722,18925200,18922933,18922404,18921423,18919798,18919597,18918491,18916988,18913526,18913362	Gene ID= ENSG00000100033.16 TPM= 10.72 Transcript Type= NA
chr22	18912781	18936294	18912781	18936294	-	transcript156.chr22.nic@PRODH	transcript156.chr22.nic	protein_coding	18936015,18925688,18925051,18922817,18922325,18921342,18919706,18919451,18918316,18916890,18913438,18912781	18936294,18925722,18925200,18922933,18922404,18921423,18919798,18919597,18918491,18916988,18913526,18913362	Gene ID= ENSG00000100033.16 TPM= 7.83 Transcript Type= NA
chr22	18912781	18936294	18912781	18936294	-	transcript163.chr22.nnic@PRODH	transcript163.chr22.nnic	protein_coding	18936015,18925688,18925051,18919706,18919451,18918316,18916890,18913438,18912781	18936294,18925722,18925200,18919798,18919597,18918491,18916988,18913526,18913362	Gene ID= ENSG00000100033.16 TPM= 5.97 Transcript Type= NA
chr22	18913357	18916635	18913357	18916635	+	transcript181.chr22.nnic@NA	transcript181.chr22.nnic	NA	18913357	18916635	Gene ID= novel_gene_chr22_182 TPM= 2.9 Transcript Type= NA
chr22	19036286	19122454	19036286	19122454	-	transcript191.chr22.nnic@DGCR2	transcript191.chr22.nnic	protein_coding	19122128,19089368,19068100,19064848,19063202,19056986,19052481,19048440,19041807,19041058,19036286	19122454,19089490,19068225,19065067,19063278,19057162,19052605,19048643,19041959,19041294,19039121	Gene ID= ENSG00000070413.19 TPM= 17.3 Transcript Type= NA
chr22	19036286	19122454	19036286	19122454	-	ENST00000263196.11@DGCR2	ENST00000263196.11	protein_coding	19122128,19089368,19068100,19064848,19063202,19056986,19048440,19041807,19041058,19036286	19122454,19089490,19068225,19065067,19063278,19057162,19048643,19041959,19041294,19039121	Gene ID= ENSG00000070413.19 TPM= 59.77 Transcript Type= protein_coding
chr22	19036286	19122454	19036286	19122454	-	transcript196.chr22.nnic@DGCR2	transcript196.chr22.nnic	protein_coding	19122128,19089368,19068100,19064848,19063202,19048440,19041807,19041058,19036286	19122454,19089490,19068225,19065067,19063278,19048643,19041959,19041294,19039121	Gene ID= ENSG00000070413.19 TPM= 18.26 Transcript Type= NA
chr22	19046159	19122454	19046159	19122454	-	transcript201.chr22.nic@DGCR2	transcript201.chr22.nic	protein_coding	19122128,19089368,19068100,19064848,19063202,19056986,19046159	19122454,19089490,19068225,19065067,19063278,19057162,19048643	Gene ID= ENSG00000070413.19 TPM= 2.17 Transcript Type= NA
chr22	19060368	19063590	19060368	19063590	+	transcript203.chr22.nnic@NA	transcript203.chr22.nnic	NA	19060368	19063590	Gene ID= novel_gene_chr22_204 TPM= 1.93 Transcript Type= NA
chr22	19130279	19144684	19130279	19144684	-	ENST00000252137.10@ESS2	ENST00000252137.10	protein_coding	19144506,19142726,19142538,19139855,19139612,19139159,19138215,19137323,19135060,19130279	19144684,19142894,19142633,19140024,19139729,19139292,19138317,19137432,19135175,19134475	Gene ID= ENSG00000100056.11 TPM= 19.31 Transcript Type= protein_coding
chr22	19133937	19144684	19133937	19144684	-	ENST00000434568.5@ESS2	ENST00000434568.5	protein_coding	19144506,19142726,19142538,19139855,19139612,19139159,19138303,19137323,19135060,19133937	19144684,19142894,19142633,19140024,19139729,19139292,19138479,19137432,19135175,19134475	Gene ID= ENSG00000100056.11 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr22	19171395	19172839	19171395	19172839	+	ENST00000565162.2@LINC01311	ENST00000565162.2	antisense_RNA	19171395	19172839	Gene ID= ENSG00000260924.2 TPM= 2.9 Transcript Type= antisense_RNA
chr22	19175575	19178830	19175575	19178830	-	ENST00000215882.9@SLC25A1	ENST00000215882.9	protein_coding	19178580,19178133,19177942,19177727,19177120,19176846,19176578,19176421,19175575	19178830,19178240,19178041,19177865,19177204,19176950,19176693,19176494,19176244	Gene ID= ENSG00000100075.9 TPM= 25.1 Transcript Type= protein_coding
chr22	19179473	19291784	19179473	19291784	-	transcript257.chr22.nic@CLTCL1	transcript257.chr22.nic	protein_coding	19291600,19275623,19253959,19242775,19239275,19235696,19234509,19233422,19233166,19232476,19229838,19226219,19225453,19223891,19222684,19221951,19221377,19219885,19216111,19210326,19208922,19208154,19201329,19199734,19196489,19196266,19191304,19183390,19180731,19180199,19179473	19291784,19275830,19254227,19242936,19239388,19235869,19234706,19233622,19233318,19232598,19229975,19226383,19225633,19224054,19222809,19222093,19221611,19220007,19216256,19210509,19209114,19208311,19201493,19199841,19196656,19196415,19191435,19183611,19180806,19180238,19179969	Gene ID= ENSG00000070371.15 TPM= 11.71 Transcript Type= NA
chr22	19179473	19291685	19179473	19291685	-	ENST00000621271.4@CLTCL1	ENST00000621271.4	protein_coding	19291600,19275623,19253959,19242775,19239275,19235696,19234509,19233422,19233166,19232476,19229838,19226219,19225453,19223891,19222684,19221951,19221377,19219885,19216111,19210326,19208922,19208154,19201329,19199734,19196489,19196266,19191304,19187981,19183390,19180731,19180199,19179473	19291685,19275830,19254227,19242936,19239388,19235869,19234706,19233622,19233318,19232598,19229975,19226383,19225633,19224054,19222809,19222093,19221611,19220007,19216256,19210509,19209114,19208311,19201493,19199841,19196656,19196415,19191435,19188091,19183611,19180806,19180238,19179969	Gene ID= ENSG00000070371.15 TPM= 72.2 Transcript Type= protein_coding
chr22	19179473	19291714	19179473	19291714	-	ENST00000427926.5@CLTCL1	ENST00000427926.5	protein_coding	19291600,19275623,19253959,19242775,19239275,19235696,19234509,19233422,19233166,19232476,19229838,19226219,19225453,19223891,19222684,19221951,19221377,19219885,19216111,19210326,19208922,19208154,19201329,19199734,19196489,19196266,19191304,19187981,19187558,19183390,19180731,19180199,19179473	19291714,19275830,19254227,19242936,19239388,19235869,19234706,19233622,19233318,19232598,19229975,19226383,19225633,19224054,19222809,19222093,19221611,19220007,19216256,19210509,19209114,19208311,19201493,19199841,19196656,19196415,19191435,19188091,19187728,19183611,19180806,19180238,19179969	Gene ID= ENSG00000070371.15 TPM= 144.59 Transcript Type= protein_coding
chr22	19330698	19431733	19330698	19431733	-	ENST00000263208.5@HIRA	ENST00000263208.5	protein_coding	19431440,19410716,19408483,19407184,19405786,19397992,19396787,19394342,19392101,19388484,19387711,19385521,19383620,19377869,19375631,19361727,19361237,19359336,19356890,19356230,19355760,19353996,19353356,19351358,19330698	19431733,19410778,19408593,19407274,19405880,19398087,19396947,19394509,19392214,19388554,19387816,19385736,19383705,19378066,19375792,19361931,19361341,19359484,19357051,19356288,19355865,19354118,19353519,19351446,19331556	Gene ID= ENSG00000100084.14 TPM= 14.48 Transcript Type= protein_coding
chr22	19440908	19448232	19440908	19448232	-	ENST00000542103.5@C22orf39	ENST00000542103.5	protein_coding	19447665,19447378,19440908	19448232,19447545,19441694	Gene ID= ENSG00000242259.8 TPM= 3.21 Transcript Type= protein_coding
chr22	19441777	19448232	19441777	19448232	-	ENST00000399562.8@C22orf39	ENST00000399562.8	protein_coding	19447665,19447378,19441777	19448232,19447545,19444390	Gene ID= ENSG00000242259.8 TPM= 13.51 Transcript Type= protein_coding
chr22	19443150	19448232	19443150	19448232	-	ENST00000611555.4@C22orf39	ENST00000611555.4	protein_coding	19447665,19447378,19443150	19448232,19447545,19444390	Gene ID= ENSG00000242259.8 TPM= 56.31 Transcript Type= protein_coding
chr22	19443371	19447697	19443371	19447697	-	ENST00000333059.5@C22orf39	ENST00000333059.5	protein_coding	19447665,19447378,19443371	19447697,19447545,19444390	Gene ID= ENSG00000242259.8 TPM= 72.4 Transcript Type= protein_coding
chr22	19431902	19436075	19431902	19436075	+	ENST00000333130.3@MRPL40	ENST00000333130.3	protein_coding	19431902,19433265,19434736,19435638	19432607,19433348,19434894,19436075	Gene ID= ENSG00000185608.8 TPM= 92.67 Transcript Type= protein_coding
chr22	19432579	19436067	19432579	19436067	+	ENST00000443660.5@MRPL40	ENST00000443660.5	protein_coding	19432579,19433265,19434736,19435638	19432859,19433348,19434894,19436067	Gene ID= ENSG00000185608.8 TPM= 3.86 Transcript Type= processed_transcript
chr22	19450621	19479007	19450621	19479007	-	transcript336.chr22.nic@UFD1	transcript336.chr22.nic	protein_coding	19478763,19475470,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454749,19450621	19479007,19475602,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744	Gene ID= ENSG00000070010.18 TPM= 6.76 Transcript Type= NA
chr22	19449910	19479215	19449910	19479215	-	ENST00000263202.14@UFD1	ENST00000263202.14	protein_coding	19479083,19475470,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454749,19449910	19479215,19475602,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744	Gene ID= ENSG00000070010.18 TPM= 7.72 Transcript Type= protein_coding
chr22	19450621	19479172	19450621	19479172	-	ENST00000459854.5@UFD1	ENST00000459854.5	protein_coding	19479083,19475496,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19450621	19479172,19475602,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830	Gene ID= ENSG00000070010.18 TPM= 5.79 Transcript Type= retained_intron
chr22	19523052	19525423	19523052	19525423	-	ENST00000413119.2@CLDN5	ENST00000413119.2	protein_coding	19525155,19523052	19525423,19524542	Gene ID= ENSG00000184113.9 TPM= 11.58 Transcript Type= protein_coding
chr22	19523027	19524400	19523027	19524400	-	ENST00000618236.1@CLDN5	ENST00000618236.1	protein_coding	19523027	19524400	Gene ID= ENSG00000184113.9 TPM= 230.71 Transcript Type= protein_coding
chr22	19523027	19525383	19523027	19525383	-	ENST00000403084.1@CLDN5	ENST00000403084.1	protein_coding	19523027	19525383	Gene ID= ENSG00000184113.9 TPM= 1.93 Transcript Type= protein_coding
chr22	19717220	19724216	19717220	19724216	+	ENST00000455843.5@SEPT5	ENST00000455843.5	protein_coding	19717220,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428,19723854	19718818,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723579,19724216	Gene ID= ENSG00000184702.18 TPM= 6.76 Transcript Type= nonsense_mediated_decay
chr22	19714464	19723319	19714464	19723319	+	ENST00000455784.6@SEPT5	ENST00000455784.6	protein_coding	19714464,19714781,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428	19714631,19714791,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723319	Gene ID= ENSG00000184702.18 TPM= 12.07 Transcript Type= protein_coding
chr22	19714504	19723274	19714504	19723274	+	ENST00000406395.5@SEPT5	ENST00000406395.5	protein_coding	19714504,19714781,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721833,19722237,19722428	19714631,19714791,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723274	Gene ID= ENSG00000184702.18 TPM= 1.93 Transcript Type= protein_coding
chr22	19718458	19723319	19718458	19723319	+	ENST00000438754.6@SEPT5	ENST00000438754.6	protein_coding	19718458,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721833,19722237,19722428	19718818,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723319	Gene ID= ENSG00000184702.18 TPM= 7.24 Transcript Type= protein_coding
chr22	19760692	19767334	19760692	19767334	+	transcript371.chr22.nic@TBX1	transcript371.chr22.nic	protein_coding	19760692,19763241,19764155,19764958,19765758,19765902,19766389	19761280,19763342,19764326,19765113,19765825,19766002,19767334	Gene ID= ENSG00000184058.13 TPM= 164.66 Transcript Type= NA
chr22	19760692	19767334	19760692	19767334	+	transcript372.chr22.nnic@TBX1	transcript372.chr22.nnic	protein_coding	19760692,19763241,19764155,19764958,19765758,19765902,19766389	19761280,19763342,19764326,19765167,19765825,19766002,19767334	Gene ID= ENSG00000184058.13 TPM= 23.24 Transcript Type= NA
chr22	19788415	19854820	19788415	19854820	-	transcript375.chr22.nic@GNB1L	transcript375.chr22.nic	protein_coding	19854660,19854443,19821228,19820598,19812285,19806659,19802001,19788415	19854820,19854539,19821375,19820723,19812447,19806757,19802216,19788960	Gene ID= ENSG00000185838.13 TPM= 1.93 Transcript Type= NA
chr22	19783224	19854939	19783224	19854939	-	ENST00000329517.10@GNB1L	ENST00000329517.10	protein_coding	19854820,19854443,19821228,19820598,19812285,19806659,19802001,19783224	19854939,19854539,19821375,19820723,19812447,19806757,19802216,19788960	Gene ID= ENSG00000185838.13 TPM= 4.83 Transcript Type= protein_coding
chr22	19788415	19854843	19788415	19854843	-	ENST00000403325.5@GNB1L	ENST00000403325.5	protein_coding	19854443,19821228,19820598,19812285,19806659,19802001,19788415	19854843,19821375,19820723,19812447,19806757,19802216,19788960	Gene ID= ENSG00000185838.13 TPM= 3.86 Transcript Type= protein_coding
chr22	19846146	19854840	19846146	19854840	-	ENST00000328554.8@RTL10	ENST00000328554.8	protein_coding	19854660,19854443,19846146	19854840,19854539,19852486	Gene ID= ENSG00000215012.8 TPM= 3.38 Transcript Type= protein_coding
chr22	19846146	19854886	19846146	19854886	-	ENST00000405640.1@RTL10	ENST00000405640.1	protein_coding	19854443,19846146	19854886,19852486	Gene ID= ENSG00000215012.8 TPM= 4.34 Transcript Type= protein_coding
chr22	19875522	19941818	19875522	19941818	-	transcript381.chr22.nnic@TXNRD2	transcript381.chr22.nnic	protein_coding	19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19894197,19883325,19880622,19880179,19878366,19878090,19877040,19875522	19941818,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19895200,19883461,19880717,19880271,19878437,19878187,19877234,19875807	Gene ID= ENSG00000184470.20 TPM= 3.86 Transcript Type= NA
chr22	19875522	19941992	19875522	19941992	-	ENST00000400521.6@TXNRD2	ENST00000400521.6	protein_coding	19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19883325,19880622,19880179,19878366,19878090,19877040,19875522	19941992,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19883461,19880717,19880271,19878437,19878187,19877234,19875807	Gene ID= ENSG00000184470.20 TPM= 16.41 Transcript Type= protein_coding
chr22	19894258	19941804	19894258	19941804	-	ENST00000334363.14@TXNRD2	ENST00000334363.14	protein_coding	19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19894258	19941804,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19895200	Gene ID= ENSG00000184470.20 TPM= 3.86 Transcript Type= protein_coding
chr22	19941800	19969016	19941800	19969016	+	transcript407.chr22.nic@COMT	transcript407.chr22.nic	protein_coding	19941800,19961199,19962527,19963566,19964110,19968536	19941897,19961289,19962815,19963759,19964299,19969016	Gene ID= ENSG00000093010.13 TPM= 2.9 Transcript Type= NA
chr22	19941607	19969975	19941607	19969975	+	ENST00000361682.10@COMT	ENST00000361682.10	protein_coding	19941607,19961199,19962527,19963566,19964168,19968536	19941897,19961289,19962815,19963759,19964299,19969975	Gene ID= ENSG00000093010.13 TPM= 93.64 Transcript Type= protein_coding
chr22	19969898	20016810	19969898	20016810	-	transcript383.chr22.nic@ARVCF	transcript383.chr22.nic	protein_coding	20016589,20010455,19990585,19981933,19981211,19979743,19978897,19977958,19977415,19976706,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969898	20016810,20010508,19990812,19982091,19981737,19980242,19979080,19978075,19977586,19976723,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743	Gene ID= ENSG00000099889.13 TPM= 3.86 Transcript Type= NA
chr22	19969898	19987200	19969898	19987200	-	transcript390.chr22.nic@ARVCF	transcript390.chr22.nic	protein_coding	19987073,19981933,19981211,19979743,19978897,19977958,19977415,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969898	19987200,19982091,19981737,19980242,19979080,19978075,19977586,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743	Gene ID= ENSG00000099889.13 TPM= 9.65 Transcript Type= NA
chr22	20021075	20065926	20021075	20065926	+	transcript415.chr22.nic@TANGO2	transcript415.chr22.nic	protein_coding	20021075,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021134,20036854,20043443,20052584,20053551,20056013,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 13.57 Transcript Type= NA
chr22	20021069	20065925	20021069	20065925	+	ENST00000456048.5@TANGO2	ENST00000456048.5	protein_coding	20021069,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021134,20037094,20043443,20052584,20053551,20056013,20061683,20063442,20065925	Gene ID= ENSG00000183597.15 TPM= 15.31 Transcript Type= protein_coding
chr22	20021069	20065925	20021069	20065925	+	ENST00000432883.5@TANGO2	ENST00000432883.5	protein_coding	20021069,20036760,20043355,20052465,20055943,20061530,20063338,20064542	20021134,20036854,20043443,20052584,20056013,20061683,20063442,20065925	Gene ID= ENSG00000183597.15 TPM= 5.17 Transcript Type= protein_coding
chr22	20021101	20065926	20021101	20065926	+	transcript430.chr22.nic@TANGO2	transcript430.chr22.nic	protein_coding	20021101,20036760,20043355,20052465,20055943,20061530,20063338,20064542	20021246,20036854,20043443,20052584,20056013,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 9.23 Transcript Type= NA
chr22	20021072	20065926	20021072	20065926	+	ENST00000398042.6@TANGO2	ENST00000398042.6	protein_coding	20021072,20036760,20043355,20052465,20061530,20063338,20064542	20021134,20036854,20043443,20052584,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 3.92 Transcript Type= protein_coding
chr22	20021108	20065926	20021108	20065926	+	ENST00000327374.8@TANGO2	ENST00000327374.8	protein_coding	20021108,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021246,20036854,20043443,20052584,20053551,20056013,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 31.91 Transcript Type= protein_coding
chr22	20021102	20023868	20021102	20023868	+	transcript439.chr22.nnic@NA	transcript439.chr22.nnic	NA	20021102	20023868	Gene ID= novel_gene_chr22_440 TPM= 4.83 Transcript Type= NA
chr22	20082053	20084830	20082053	20084830	-	transcript462.chr22.nnic@NA	transcript462.chr22.nnic	NA	20082053	20084830	Gene ID= novel_gene_chr22_463 TPM= 8.69 Transcript Type= NA
chr22	20111875	20117392	20111875	20117392	-	ENST00000403707.7@TRMT2A	ENST00000403707.7	protein_coding	20117097,20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20111875	20117392,20116972,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113234,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 2.41 Transcript Type= protein_coding
chr22	20111866	20117295	20111866	20117295	-	ENST00000252136.11@TRMT2A	ENST00000252136.11	protein_coding	20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20111866	20117295,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113234,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 3.38 Transcript Type= protein_coding
chr22	20112301	20117245	20112301	20117245	-	transcript449.chr22.nnic@TRMT2A	transcript449.chr22.nnic	protein_coding	20117097,20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20112911,20112301	20117245,20116972,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 1.93 Transcript Type= NA
chr22	20111875	20117245	20111875	20117245	-	transcript450.chr22.nnic@TRMT2A	transcript450.chr22.nnic	protein_coding	20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20112911,20111875	20117245,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 3.38 Transcript Type= NA
chr22	20111875	20117245	20111875	20117245	-	transcript456.chr22.nic@TRMT2A	transcript456.chr22.nic	protein_coding	20116883,20116038,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20111875	20117245,20116612,20115780,20114876,20114685,20113808,20113507,20113234,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 3.38 Transcript Type= NA
chr22	20112301	20117245	20112301	20117245	-	transcript458.chr22.nnic@TRMT2A	transcript458.chr22.nnic	protein_coding	20116883,20116038,20115475,20114965,20114761,20114574,20113686,20113432,20112911,20112301	20117245,20116612,20115780,20115079,20114876,20114685,20113808,20113507,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 1.93 Transcript Type= NA
chr22	20112304	20117245	20112304	20117245	-	ENST00000404751.7@TRMT2A	ENST00000404751.7	protein_coding	20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20112304	20117245,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113234,20113007,20112816	Gene ID= ENSG00000099899.14 TPM= 9.65 Transcript Type= protein_coding
chr22	20117424	20127355	20117424	20127355	+	ENST00000402752.5@RANBP1	ENST00000402752.5	protein_coding	20117424,20119013,20122264,20125308,20126303,20126955	20117664,20119149,20122421,20125436,20126368,20127355	Gene ID= ENSG00000099901.16 TPM= 25.1 Transcript Type= protein_coding
chr22	20117474	20127358	20117474	20127358	+	transcript473.chr22.nic@RANBP1	transcript473.chr22.nic	protein_coding	20117474,20119013,20122264,20125308,20126303	20117664,20119149,20122421,20125436,20127358	Gene ID= ENSG00000099901.16 TPM= 1.93 Transcript Type= NA
chr22	20117548	20127181	20117548	20127181	+	ENST00000331821.7@RANBP1	ENST00000331821.7	protein_coding	20117548,20119013,20122264,20125308,20126303,20126952	20117664,20119149,20122421,20125436,20126368,20127181	Gene ID= ENSG00000099901.16 TPM= 22.2 Transcript Type= protein_coding
chr22	20142999	20146450	20142999	20146450	+	transcript476.chr22.nic@ZDHHC8	transcript476.chr22.nic	protein_coding	20142999,20145229	20143756,20146450	Gene ID= ENSG00000099904.15 TPM= 27.99 Transcript Type= NA
chr22	20142999	20146447	20142999	20146447	+	transcript477.chr22.nnic@NA	transcript477.chr22.nnic	NA	20142999	20146447	Gene ID= novel_gene_chr22_478 TPM= 20.27 Transcript Type= NA
chr22	20314276	20320080	20314276	20320080	-	ENST00000248879.7@DGCR6L	ENST00000248879.7	protein_coding	20319879,20319639,20316119,20315336,20314276	20320080,20319799,20316219,20315476,20314824	Gene ID= ENSG00000128185.9 TPM= 97.5 Transcript Type= protein_coding
chr22	20314283	20320009	20314283	20320009	-	ENST00000405465.3@DGCR6L	ENST00000405465.3	protein_coding	20319879,20319639,20315336,20314283	20320009,20319786,20315476,20314824	Gene ID= ENSG00000128185.9 TPM= 11.58 Transcript Type= protein_coding
chr22	20320137	20321203	20320137	20321203	+	transcript487.chr22.nnic@NA	transcript487.chr22.nnic	NA	20320137	20321203	Gene ID= novel_gene_chr22_488 TPM= 1.93 Transcript Type= NA
chr22	20394115	20407678	20394115	20407678	+	ENST00000400451.6@ZNF74	ENST00000400451.6	protein_coding	20394115,20395333,20400632,20401277,20405377	20394662,20395418,20400758,20401372,20407678	Gene ID= ENSG00000185252.18 TPM= 4.83 Transcript Type= protein_coding
chr22	20424582	20426260	20424582	20426260	-	transcript496.chr22.nnic@NA	transcript496.chr22.nnic	NA	20424582	20426260	Gene ID= novel_gene_chr22_497 TPM= 1.93 Transcript Type= NA
chr22	20441519	20495783	20441519	20495783	-	transcript499.chr22.nic@KLHL22	transcript499.chr22.nic	protein_coding	20495760,20488985,20471350,20464858,20457808,20446443,20441519	20495783,20489212,20471515,20465576,20458000,20446676,20442438	Gene ID= ENSG00000099910.16 TPM= 6.27 Transcript Type= NA
chr22	20441519	20495883	20441519	20495883	-	ENST00000328879.8@KLHL22	ENST00000328879.8	protein_coding	20495760,20488985,20471350,20464858,20457808,20446443,20441519	20495883,20489244,20471515,20465576,20458000,20446676,20442438	Gene ID= ENSG00000099910.16 TPM= 18.82 Transcript Type= protein_coding
chr22	20507577	20587617	20507577	20587617	+	transcript504.chr22.nnic@MED15	transcript504.chr22.nnic	protein_coding	20507577,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20568979,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568	20507746,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20569113,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587617	Gene ID= ENSG00000099917.17 TPM= 19.71 Transcript Type= NA
chr22	20507577	20587617	20507577	20587617	+	transcript508.chr22.nic@MED15	transcript508.chr22.nic	protein_coding	20507577,20537117,20551436,20553145,20564450,20566467,20568521,20575113,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568	20507746,20537204,20551487,20553174,20564688,20566817,20568631,20575232,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587617	Gene ID= ENSG00000099917.17 TPM= 20.19 Transcript Type= NA
chr22	20507602	20587632	20507602	20587632	+	ENST00000292733.11@MED15	ENST00000292733.11	protein_coding	20507602,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568	20507746,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587632	Gene ID= ENSG00000099917.17 TPM= 48.99 Transcript Type= protein_coding
chr22	20507610	20587619	20507610	20587619	+	ENST00000263205.11@MED15	ENST00000263205.11	protein_coding	20507610,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20575113,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568	20507746,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20575232,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587619	Gene ID= ENSG00000099917.17 TPM= 45.29 Transcript Type= protein_coding
chr22	20575370	20579294	20575370	20579294	-	transcript519.chr22.nnic@NA	transcript519.chr22.nnic	NA	20575370	20579294	Gene ID= novel_gene_chr22_520 TPM= 1.93 Transcript Type= NA
chr22	20707703	20858779	20707703	20858779	-	transcript523.chr22.nnic@PI4KA	transcript523.chr22.nnic	protein_coding	20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807337,20804974,20804300,20803191,20801973,20799671,20799093,20798584,20796146,20793193,20765585,20765100,20764817,20761353,20753110,20752903,20751674,20751293,20749905,20747583,20742608,20742228,20734395,20734043,20733736,20732971,20729892,20729632,20729313,20727774,20727230,20726488,20721298,20718693,20717708,20714628,20714458,20713281,20712693,20712486,20711341,20710699,20709908,20709296,20707703	20858779,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687,20796314,20793243,20765693,20765236,20764950,20761386,20753180,20753027,20751755,20751376,20749994,20747702,20742764,20742355,20734553,20734194,20733843,20733098,20730011,20729711,20729506,20727864,20727397,20726541,20721418,20718822,20717778,20714700,20714528,20713390,20712797,20712611,20711461,20710858,20709997,20709379,20708098	Gene ID= ENSG00000241973.10 TPM= 13.51 Transcript Type= NA
chr22	20707691	20858812	20707691	20858812	-	ENST00000255882.10@PI4KA	ENST00000255882.10	protein_coding	20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799093,20798584,20796146,20793193,20765585,20765100,20764817,20761304,20753110,20752903,20751674,20751293,20749905,20747583,20744628,20742608,20742228,20734395,20734043,20733736,20732971,20729892,20729632,20729313,20727774,20727230,20726488,20721298,20718693,20717708,20714628,20714458,20713281,20712693,20712486,20711341,20710699,20709908,20709296,20707691	20858812,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687,20796314,20793243,20765693,20765236,20764950,20761386,20753180,20753027,20751755,20751376,20749994,20747702,20744720,20742764,20742355,20734553,20734194,20733843,20733098,20730011,20729711,20729506,20727864,20727397,20726541,20721418,20718822,20717778,20714700,20714528,20713390,20712797,20712611,20711461,20710858,20709997,20709379,20708098	Gene ID= ENSG00000241973.10 TPM= 36.68 Transcript Type= protein_coding
chr22	20798478	20858812	20798478	20858812	-	ENST00000485963.5@PI4KA	ENST00000485963.5	protein_coding	20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799093,20798478	20858812,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687	Gene ID= ENSG00000241973.10 TPM= 1.93 Transcript Type= retained_intron
chr22	20715077	20715775	20715077	20715775	-	transcript538.chr22.nnic@NA	transcript538.chr22.nnic	NA	20715077	20715775	Gene ID= novel_gene_chr22_539 TPM= 1.93 Transcript Type= NA
chr22	20917363	20953744	20917363	20953744	+	transcript541.chr22.nnic@CRKL	transcript541.chr22.nnic	protein_coding	20917363,20933779,20949711,20953206	20918245,20934244,20951265,20953744	Gene ID= ENSG00000099942.12 TPM= 9.65 Transcript Type= NA
chr22	20917426	20953749	20917426	20953749	+	ENST00000354336.7@CRKL	ENST00000354336.7	protein_coding	20917426,20933779,20949711	20918245,20934244,20953749	Gene ID= ENSG00000099942.12 TPM= 78.19 Transcript Type= protein_coding
chr22	20982013	20999038	20982013	20999038	+	ENST00000215739.12@LZTR1	ENST00000215739.12	protein_coding	20982013,20983027,20985841,20987504,20988010,20988789,20989625,20990386,20991628,20992214,20992794,20993662,20993924,20994104,20994558,20994870,20995746,20995963,20996696,20996886,20997232	20982571,20983089,20985897,20987583,20988118,20988872,20989682,20990525,20991829,20992369,20992904,20993754,20994019,20994269,20994727,20995026,20995872,20996112,20996801,20996966,20999038	Gene ID= ENSG00000099949.18 TPM= 32.82 Transcript Type= protein_coding
chr22	20981360	20982230	20981360	20982230	-	transcript569.chr22.nnic@NA	transcript569.chr22.nnic	NA	20981360	20982230	Gene ID= novel_gene_chr22_570 TPM= 11.58 Transcript Type= NA
chr22	20999777	21002196	20999777	21002196	-	ENST00000399133.2@THAP7	ENST00000399133.2	protein_coding	21002086,21001832,21001256,21000647,20999777	21002196,21001911,21001411,21000787,21000432	Gene ID= ENSG00000184436.11 TPM= 36.2 Transcript Type= protein_coding
chr22	20999772	21002086	20999772	21002086	-	ENST00000215742.8@THAP7	ENST00000215742.8	protein_coding	21001832,21001256,21000647,20999772	21002086,21001411,21000787,21000432	Gene ID= ENSG00000184436.11 TPM= 14.96 Transcript Type= protein_coding
chr22	20999802	21002106	20999802	21002106	-	ENST00000476667.5@THAP7	ENST00000476667.5	protein_coding	21001832,21000647,20999802	21002106,21001411,21000432	Gene ID= ENSG00000184436.11 TPM= 1.93 Transcript Type= retained_intron
chr22	20999773	21001795	20999773	21001795	-	ENST00000471073.1@THAP7	ENST00000471073.1	protein_coding	21000647,20999773	21001795,21000432	Gene ID= ENSG00000184436.11 TPM= 5.79 Transcript Type= retained_intron
chr22	21001922	21003272	21001922	21003272	+	ENST00000429962.1@THAP7-AS1	ENST00000429962.1	antisense_RNA	21001922,21002918	21002829,21003272	Gene ID= ENSG00000230513.1 TPM= 3.86 Transcript Type= antisense_RNA
chr22	21015119	21028008	21015119	21028008	+	transcript574.chr22.nnic@P2RX6	transcript574.chr22.nnic	protein_coding	21015119,21015942,21017989,21022676,21022942,21023118,21023275,21023522,21025805,21026011,21026252,21026420	21015260,21016092,21018060,21022751,21023035,21023198,21023416,21023618,21025898,21026076,21026329,21028008	Gene ID= ENSG00000099957.16 TPM= 1.93 Transcript Type= NA
chr22	21015027	21028830	21015027	21028830	+	ENST00000413302.6@P2RX6	ENST00000413302.6	protein_coding	21015027,21015942,21017989,21022676,21022942,21023118,21023275,21023509,21025805,21026011,21026252,21026420	21015338,21016092,21018060,21022751,21023035,21023198,21023416,21023618,21025898,21026076,21026329,21028830	Gene ID= ENSG00000099957.16 TPM= 18.53 Transcript Type= protein_coding
chr22	21015119	21028008	21015119	21028008	+	transcript581.chr22.nic@P2RX6	transcript581.chr22.nic	protein_coding	21015119,21015942,21017989,21022942,21023118,21023275,21023509,21025805,21026011,21026252,21026420	21015260,21016092,21018060,21023035,21023198,21023416,21023618,21025898,21026076,21026329,21028008	Gene ID= ENSG00000099957.16 TPM= 2.12 Transcript Type= NA
chr22	21015119	21028008	21015119	21028008	+	transcript582.chr22.nnic@P2RX6	transcript582.chr22.nnic	protein_coding	21015119,21015942,21022676,21022942,21023118,21023275,21023509,21025805,21026011,21026252,21026420	21015260,21016092,21022751,21023035,21023198,21023416,21023618,21025898,21026076,21026329,21028008	Gene ID= ENSG00000099957.16 TPM= 2.12 Transcript Type= NA
chr22	21015130	21028011	21015130	21028011	+	transcript584.chr22.nnic@P2RX6	transcript584.chr22.nnic	protein_coding	21015130,21015942,21017989,21022676,21022942,21023118,21023275,21023509,21025805,21026011,21026420	21015338,21016092,21018060,21022751,21023035,21023198,21023416,21023618,21025898,21026076,21028011	Gene ID= ENSG00000099957.16 TPM= 2.9 Transcript Type= NA
chr22	21015130	21028008	21015130	21028008	+	transcript585.chr22.nnic@P2RX6	transcript585.chr22.nnic	protein_coding	21015130,21015942,21017989,21022676,21022942,21023118,21023275,21023509,21025805,21026252,21026420	21015338,21016092,21018060,21022751,21023035,21023198,21023416,21023618,21025898,21026329,21028008	Gene ID= ENSG00000099957.16 TPM= 1.93 Transcript Type= NA
chr22	21015130	21028008	21015130	21028008	+	transcript586.chr22.nic@P2RX6	transcript586.chr22.nic	protein_coding	21015130,21015942,21017989,21022942,21023118,21023275,21023509,21025805,21026011,21026252,21026420	21015338,21016092,21018060,21023035,21023198,21023416,21023618,21025898,21026076,21026329,21028008	Gene ID= ENSG00000099957.16 TPM= 3.09 Transcript Type= NA
chr22	21015119	21028005	21015119	21028005	+	transcript590.chr22.nnic@P2RX6	transcript590.chr22.nnic	protein_coding	21015119,21015942,21017989,21022676,21022942,21023118,21023275,21023509,21025805,21026420	21015260,21016092,21018060,21022751,21023035,21023198,21023416,21023618,21025898,21028005	Gene ID= ENSG00000099957.16 TPM= 1.93 Transcript Type= NA
chr22	21015130	21028005	21015130	21028005	+	transcript593.chr22.nnic@P2RX6	transcript593.chr22.nnic	protein_coding	21015130,21015942,21017989,21022676,21022942,21023118,21023275,21023509,21025805,21026420	21015338,21016092,21018060,21022751,21023035,21023198,21023416,21023618,21025898,21028005	Gene ID= ENSG00000099957.16 TPM= 1.93 Transcript Type= NA
chr22	21015153	21028008	21015153	21028008	+	ENST00000442475.5@P2RX6	ENST00000442475.5	protein_coding	21015153,21015942,21022942,21023118,21023275,21023509,21025805,21026011,21026252,21026420	21015260,21016092,21023035,21023198,21023416,21023618,21025898,21026076,21026329,21028008	Gene ID= ENSG00000099957.16 TPM= 88.04 Transcript Type= nonsense_mediated_decay
chr22	21035243	21045097	21035243	21045097	-	transcript603.chr22.nic@P2RX6P	transcript603.chr22.nic	transcribed_unprocessed_pseudogene	21044884,21044149,21042343,21035243	21045097,21044299,21042414,21035436	Gene ID= ENSG00000206145.8 TPM= 1.93 Transcript Type= NA
chr22	21035243	21045074	21035243	21045074	-	transcript605.chr22.nnic@P2RX6P	transcript605.chr22.nnic	transcribed_unprocessed_pseudogene	21044962,21044149,21042343,21035243	21045074,21044299,21042482,21035436	Gene ID= ENSG00000206145.8 TPM= 1.93 Transcript Type= NA
chr22	21035243	21044984	21035243	21044984	-	transcript606.chr22.nnic@P2RX6P	transcript606.chr22.nnic	transcribed_unprocessed_pseudogene	21044962,21042343,21035243	21044984,21042414,21035436	Gene ID= ENSG00000206145.8 TPM= 1.93 Transcript Type= NA
chr22	21035243	21045012	21035243	21045012	-	ENST00000439119.5@P2RX6P	ENST00000439119.5	transcribed_unprocessed_pseudogene	21044962,21044149,21042343,21035243	21045012,21044299,21042414,21035436	Gene ID= ENSG00000206145.8 TPM= 2.9 Transcript Type= processed_transcript
chr22	21473000	21517523	21473000	21517523	-	transcript608.chr22.nic@PI4KAP2	transcript608.chr22.nic	transcribed_unprocessed_pseudogene	21517325,21491994,21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477790,21476644,21476002,21475211,21474597,21473000	21517523,21492094,21488381,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915,21476764,21476160,21475300,21474680,21473405	Gene ID= ENSG00000183506.17 TPM= 8.69 Transcript Type= NA
chr22	21567547	21624034	21567547	21624034	+	ENST00000342192.8@UBE2L3	ENST00000342192.8	protein_coding	21567547,21592861,21610857,21621515	21567771,21592956,21611043,21624034	Gene ID= ENSG00000185651.14 TPM= 56.47 Transcript Type= protein_coding
chr22	21567730	21624034	21567730	21624034	+	ENST00000496722.1@UBE2L3	ENST00000496722.1	protein_coding	21567730,21592861,21610857,21621515	21568377,21592956,21611043,21624034	Gene ID= ENSG00000185651.14 TPM= 11.1 Transcript Type= retained_intron
chr22	21628089	21630064	21628089	21630064	-	ENST00000292778.10@YDJC	ENST00000292778.10	protein_coding	21629851,21629602,21629308,21629010,21628089	21630064,21629761,21629407,21629187,21628787	Gene ID= ENSG00000161179.13 TPM= 4.34 Transcript Type= protein_coding
chr22	21628089	21630064	21628089	21630064	-	ENST00000415762.6@YDJC	ENST00000415762.6	protein_coding	21629851,21629543,21629308,21629010,21628089	21630064,21629761,21629407,21629187,21628787	Gene ID= ENSG00000161179.13 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chr22	21628114	21630038	21628114	21630038	-	ENST00000473985.1@YDJC	ENST00000473985.1	protein_coding	21629851,21629308,21629010,21628114	21630038,21629761,21629187,21628787	Gene ID= ENSG00000161179.13 TPM= 1.93 Transcript Type= retained_intron
chr22	21628089	21630031	21628089	21630031	-	ENST00000468686.5@YDJC	ENST00000468686.5	protein_coding	21629308,21628089	21630031,21628787	Gene ID= ENSG00000161179.13 TPM= 1.93 Transcript Type= retained_intron
chr22	21642261	21644298	21642261	21644298	+	ENST00000248958.4@SDF2L1	ENST00000248958.4	protein_coding	21642261,21642862,21643894	21642523,21643058,21644298	Gene ID= ENSG00000128228.4 TPM= 23.17 Transcript Type= protein_coding
chr22	21666022	21697866	21666022	21697866	+	ENST00000626352.2@PPIL2	ENST00000626352.2	protein_coding	21666022,21669913,21670566,21670997,21672330,21675064,21681299,21682437,21683182,21684753,21686483,21686892,21687643,21688073,21688732,21693816,21694593,21694755,21694937,21695398,21696885	21666131,21669962,21670611,21671059,21672381,21675115,21681390,21682526,21683257,21684913,21686558,21686998,21687732,21688106,21688849,21693872,21694665,21694817,21695070,21695496,21697866	Gene ID= ENSG00000100023.18 TPM= 2.9 Transcript Type= protein_coding
chr22	21769040	21867680	21769040	21867680	-	ENST00000398822.7@MAPK1	ENST00000398822.7	protein_coding	21867322,21807664,21805850,21799012,21788694,21788257,21772873,21769040	21867680,21807846,21806039,21799128,21788808,21788388,21772982,21769320	Gene ID= ENSG00000100030.14 TPM= 7.72 Transcript Type= protein_coding
chr22	21919420	21952837	21919420	21952837	-	ENST00000263212.9@PPM1F	ENST00000263212.9	protein_coding	21952792,21945843,21939532,21934024,21933391,21931148,21925569,21919420	21952837,21946108,21939680,21934226,21933579,21931291,21925662,21923471	Gene ID= ENSG00000100034.13 TPM= 16.41 Transcript Type= protein_coding
chr22	21957031	21982832	21957031	21982832	-	transcript652.chr22.nic@TOP3B	transcript652.chr22.nic	protein_coding	21982730,21975640,21974357,21972612,21971877,21970980,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959587,21959132,21958492,21957031	21982832,21975807,21974488,21972718,21971951,21971061,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21959232,21958693,21957595	Gene ID= ENSG00000100038.19 TPM= 4.83 Transcript Type= NA
chr22	21957025	21982816	21957025	21982816	-	ENST00000357179.9@TOP3B	ENST00000357179.9	protein_coding	21982730,21975640,21974357,21972612,21971877,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959587,21959132,21958492,21957025	21982816,21975807,21974488,21972718,21971951,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21959232,21958693,21957595	Gene ID= ENSG00000100038.19 TPM= 13.51 Transcript Type= protein_coding
chr22	22298070	22309691	22298070	22309691	+	transcript658.chr22.nnic@AC245060.4	transcript658.chr22.nnic	unprocessed_pseudogene	22298070,22298107,22303224,22303943,22306833,22307106	22298077,22298211,22303297,22304114,22307021,22309691	Gene ID= ENSG00000272779.1 TPM= 7.72 Transcript Type= NA
chr22	22712378	22895825	22712378	22895825	+	transcript667.chr22.nnic@IGLL5	transcript667.chr22.nnic	protein_coding	22712378,22712899,22893773,22895375	22712464,22713189,22893818,22895825	Gene ID= ENSG00000254709.7 TPM= 2.9 Transcript Type= NA
chr22	22880720	22901437	22880720	22901437	+	transcript672.chr22.nnic@IGLV3-1	transcript672.chr22.nnic	IG_V_gene	22880720,22881097,22899616,22900976	22880803,22881389,22899655,22901437	Gene ID= ENSG00000211673.2 TPM= 7.72 Transcript Type= NA
chr22	23070361	23125037	23070361	23125037	+	ENST00000615612.1@GNAZ	ENST00000615612.1	protein_coding	23070361,23095247,23123087	23070570,23096418,23125037	Gene ID= ENSG00000128266.8 TPM= 4.83 Transcript Type= protein_coding
chr22	23180210	23318037	23180210	23318037	+	ENST00000305877.12@BCR	ENST00000305877.12	protein_coding	23180210,23253799,23260950,23261355,23268408,23271532,23273081,23273634,23283977,23285033,23287159,23288097,23289517,23290339,23292541,23295024,23309424,23310324,23311697,23312887,23313968,23314552,23315433	23182239,23253980,23261054,23261540,23268515,23271592,23273133,23273774,23284098,23285201,23287278,23288172,23289621,23290413,23292638,23295155,23309483,23310433,23311836,23313021,23314073,23314714,23318037	Gene ID= ENSG00000186716.20 TPM= 8.69 Transcript Type= protein_coding
chr22	23638487	23717356	23638487	23717356	-	ENST00000445682.2@GUSBP11	ENST00000445682.2	processed_transcript	23717031,23715009,23714187,23709786,23709130,23705429,23700726,23694119,23690236,23683725,23659865,23638487	23717356,23715194,23714342,23709867,23709241,23705541,23700845,23695517,23690356,23683867,23660000,23638942	Gene ID= ENSG00000228315.11 TPM= 1.61 Transcript Type= processed_transcript
chr22	23638487	23693536	23638487	23693536	-	transcript683.chr22.nic@AP000347.1	transcript683.chr22.nic	transcribed_unprocessed_pseudogene	23690232,23683725,23659865,23638487	23693536,23683867,23660000,23638942	Gene ID= ENSG00000272578.5 TPM= 2.58 Transcript Type= NA
chr22	23638487	23692824	23638487	23692824	-	transcript684.chr22.nnic@AP000347.1	transcript684.chr22.nnic	transcribed_unprocessed_pseudogene	23690232,23683725,23638487	23692824,23683867,23638942	Gene ID= ENSG00000272578.5 TPM= 2.58 Transcript Type= NA
chr22	23765834	23768001	23765834	23768001	-	transcript687.chr22.nnic@CHCHD10	transcript687.chr22.nnic	protein_coding	23767834,23767374,23766124,23765834	23768001,23767593,23766275,23765979	Gene ID= ENSG00000250479.8 TPM= 22.68 Transcript Type= NA
chr22	23765834	23768443	23765834	23768443	-	ENST00000484558.2@CHCHD10	ENST00000484558.2	protein_coding	23767834,23767374,23766128,23765834	23768443,23767593,23766275,23766026	Gene ID= ENSG00000250479.8 TPM= 288.79 Transcript Type= protein_coding
chr22	23765834	23767942	23765834	23767942	-	ENST00000401675.7@CHCHD10	ENST00000401675.7	protein_coding	23767834,23767374,23766128,23765834	23767942,23767593,23766296,23766026	Gene ID= ENSG00000250479.8 TPM= 26.71 Transcript Type= protein_coding
chr22	23772819	23784316	23772819	23784316	+	ENST00000215743.7@MMP11	ENST00000215743.7	protein_coding	23772819,23779187,23780359,23780582,23780859,23781193,23782226,23783411	23772978,23779416,23780502,23780715,23781100,23781409,23782483,23784316	Gene ID= ENSG00000099953.9 TPM= 4.83 Transcript Type= protein_coding
chr22	23786989	23834516	23786989	23834516	+	transcript712.chr22.nic@SMARCB1	transcript712.chr22.nic	protein_coding	23786989,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141	23787262,23791894,23793688,23801135,23803422,23816936,23825415,23833703,23834516	Gene ID= ENSG00000099956.18 TPM= 7.14 Transcript Type= NA
chr22	23786974	23834516	23786974	23834516	+	ENST00000263121.11@SMARCB1	ENST00000263121.11	protein_coding	23786974,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141	23787262,23791894,23793688,23801081,23803422,23816936,23825415,23833703,23834516	Gene ID= ENSG00000099956.18 TPM= 165.62 Transcript Type= protein_coding
chr22	23786994	23834516	23786994	23834516	+	ENST00000407422.7@SMARCB1	ENST00000407422.7	protein_coding	23786994,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141	23787262,23791867,23793688,23801081,23803422,23816936,23825415,23833703,23834516	Gene ID= ENSG00000099956.18 TPM= 62.33 Transcript Type= protein_coding
chr22	23786963	23834516	23786963	23834516	+	ENST00000344921.10@SMARCB1	ENST00000344921.10	protein_coding	23786963,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141	23787262,23791867,23793688,23801135,23803422,23816936,23825415,23833703,23834516	Gene ID= ENSG00000099956.18 TPM= 9.07 Transcript Type= protein_coding
chr22	23836734	23839004	23836734	23839004	-	ENST00000318109.11@DERL3	ENST00000318109.11	protein_coding	23838895,23838711,23838564,23838352,23837659,23837064,23836734	23839004,23838776,23838637,23838445,23837854,23837154,23836962	Gene ID= ENSG00000099958.14 TPM= 1.93 Transcript Type= protein_coding
chr22	23856703	23886309	23856703	23886309	+	ENST00000345044.10@SLC2A11	ENST00000345044.10	protein_coding	23856703,23862104,23868481,23875117,23877042,23877721,23882459,23882759,23883772,23883949,23884302,23884649	23856991,23862202,23868641,23875241,23877171,23877869,23882646,23882869,23883873,23884024,23884429,23886309	Gene ID= ENSG00000133460.19 TPM= 2.9 Transcript Type= protein_coding
chr22	23894004	23895226	23894004	23895226	+	ENST00000215754.7@MIF	ENST00000215754.7	protein_coding	23894004,23894772,23895040	23894582,23894944,23895226	Gene ID= ENSG00000240972.1 TPM= 133.21 Transcript Type= protein_coding
chr22	23894450	23895227	23894450	23895227	+	ENST00000465752.1@MIF	ENST00000465752.1	protein_coding	23894450,23894772	23894582,23895227	Gene ID= ENSG00000240972.1 TPM= 2.9 Transcript Type= retained_intron
chr22	23957414	23961186	23957414	23961186	-	ENST00000290765.8@GSTT2B	ENST00000290765.8	protein_coding	23961020,23960294,23958551,23958285,23957414	23961186,23960381,23958701,23958458,23957932	Gene ID= ENSG00000133433.10 TPM= 3.86 Transcript Type= protein_coding
chr22	23966901	23972532	23966901	23972532	+	ENST00000215770.5@DDTL	ENST00000215770.5	protein_coding	23966901,23967386,23971286	23967022,23967561,23972532	Gene ID= ENSG00000099974.7 TPM= 3.86 Transcript Type= protein_coding
chr22	23971365	23974584	23971365	23974584	-	ENST00000398344.8@DDT	ENST00000398344.8	protein_coding	23974307,23973768,23971365	23974584,23973943,23971623	Gene ID= ENSG00000099977.13 TPM= 275.11 Transcript Type= protein_coding
chr22	23971372	23973719	23971372	23973719	-	transcript736.chr22.nnic@NA	transcript736.chr22.nnic	NA	23971372	23973719	Gene ID= novel_gene_chr22_737 TPM= 1.93 Transcript Type= NA
chr22	24219660	24245132	24219660	24245132	-	transcript746.chr22.nic@GGT5	transcript746.chr22.nic	protein_coding	24244553,24233874,24233498,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24220492,24219660	24245132,24234004,24233593,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220584,24220116	Gene ID= ENSG00000099998.17 TPM= 7.08 Transcript Type= NA
chr22	24219654	24245142	24219654	24245142	-	ENST00000327365.8@GGT5	ENST00000327365.8	protein_coding	24244553,24233874,24233498,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24219654	24245142,24234004,24233593,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220116	Gene ID= ENSG00000099998.17 TPM= 23.49 Transcript Type= protein_coding
chr22	24219654	24245078	24219654	24245078	-	ENST00000263112.11@GGT5	ENST00000263112.11	protein_coding	24244553,24233874,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24219654	24245078,24234004,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220116	Gene ID= ENSG00000099998.17 TPM= 4.18 Transcript Type= protein_coding
chr22	24270817	24417739	24270817	24417739	+	ENST00000437398.5@SPECC1L	ENST00000437398.5	protein_coding	24270817,24302195,24313313,24321288,24324220,24328846,24330256,24334410,24338386,24347086,24363261,24365476,24369218,24411588,24412648,24414534	24270983,24302384,24313466,24322918,24324427,24328919,24330431,24334573,24338477,24347176,24363344,24365632,24369320,24411704,24412707,24417739	Gene ID= ENSG00000100014.19 TPM= 4.83 Transcript Type= protein_coding
chr22	24270819	24328887	24270819	24328887	+	transcript763.chr22.nic@SPECC1L-ADORA2A	transcript763.chr22.nic	protein_coding	24270819,24276700,24302195,24313313,24321288,24324220,24328846	24270983,24276803,24302384,24313466,24322918,24324427,24328887	Gene ID= ENSG00000258555.6 TPM= 1.93 Transcript Type= NA
chr22	24540438	24555316	24540438	24555316	-	ENST00000435822.5@GUCD1	ENST00000435822.5	protein_coding	24554949,24548917,24547908,24546914,24543842,24540438	24555316,24549001,24548073,24547005,24544083,24543097	Gene ID= ENSG00000138867.16 TPM= 305.52 Transcript Type= protein_coding
chr22	24540423	24555935	24540423	24555935	-	ENST00000621833.4@GUCD1	ENST00000621833.4	protein_coding	24555615,24548917,24547908,24546914,24543842,24540423	24555935,24549001,24548073,24547005,24544083,24543100	Gene ID= ENSG00000138867.16 TPM= 88.33 Transcript Type= protein_coding
chr22	24555957	24576921	24555957	24576921	+	transcript777.chr22.nnic@SNRPD3	transcript777.chr22.nnic	protein_coding	24555957,24557657,24567984,24571916,24576516	24556071,24557800,24568176,24572481,24576921	Gene ID= ENSG00000100028.11 TPM= 10.14 Transcript Type= NA
chr22	24555503	24572772	24555503	24572772	+	ENST00000215829.7@SNRPD3	ENST00000215829.7	protein_coding	24555503,24557657,24567984,24571916	24556071,24557800,24568176,24572772	Gene ID= ENSG00000100028.11 TPM= 40.06 Transcript Type= protein_coding
chr22	24555968	24628996	24555968	24628996	+	transcript768.chr22.nic@GGT1	transcript768.chr22.nic	protein_coding	24555968,24557657,24567984,24572018,24583682,24607954,24609962,24610358,24611078,24614776,24615041,24620328,24620913,24623107,24623780,24627432,24627852,24628081,24628275,24628693	24556071,24557800,24568176,24572061,24583808,24608023,24610033,24610531,24611245,24614906,24615127,24620520,24621070,24623256,24623916,24627619,24627979,24628193,24628388,24628996	Gene ID= ENSG00000100031.18 TPM= 1.93 Transcript Type= NA
chr22	24585635	24593124	24585635	24593124	-	transcript784.chr22.nnic@LRRC75B	transcript784.chr22.nnic	protein_coding	24592863,24589821,24588679,24588214,24585635	24593124,24589949,24589334,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 1.93 Transcript Type= NA
chr22	24585635	24593124	24585635	24593124	-	transcript795.chr22.nic@LRRC75B	transcript795.chr22.nic	protein_coding	24592863,24588214,24585635	24593124,24589949,24586411	Gene ID= ENSG00000178026.12 TPM= 2.9 Transcript Type= NA
chr22	24585620	24593063	24585620	24593063	-	ENST00000318753.12@LRRC75B	ENST00000318753.12	protein_coding	24592863,24589821,24588214,24585620	24593063,24589949,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 6.76 Transcript Type= protein_coding
chr22	24585620	24593066	24585620	24593066	-	ENST00000446942.5@LRRC75B	ENST00000446942.5	protein_coding	24592863,24589821,24588679,24588214,24585620	24593066,24589949,24589265,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr22	25102417	25112722	25102417	25112722	-	transcript798.chr22.nnic@AL022323.1	transcript798.chr22.nnic	antisense_RNA	25112617,25112187,25110958,25110001,25104311,25102417	25112722,25112423,25110997,25110118,25104424,25102918	Gene ID= ENSG00000203280.4 TPM= 1.93 Transcript Type= NA
chr22	25102433	25112620	25102433	25112620	-	transcript806.chr22.nic@AL022323.1	transcript806.chr22.nic	antisense_RNA	25112187,25110958,25110001,25102433	25112620,25110997,25110118,25102918	Gene ID= ENSG00000203280.4 TPM= 2.9 Transcript Type= NA
chr22	25448105	25461678	25448105	25461678	+	ENST00000382734.9@CRYBB2P1	ENST00000382734.9	transcribed_unprocessed_pseudogene	25448105,25455712,25457259,25459416,25460867	25448284,25455840,25457401,25459515,25461678	Gene ID= ENSG00000100058.12 TPM= 1.93 Transcript Type= processed_transcript
chr22	25742110	26030644	25742110	26030644	+	transcript817.chr22.nnic@MYO18B	transcript817.chr22.nnic	protein_coding	25742110,25760984,25763231,25768115,25770110,25770872,25772334,25777583,25780056,25781734,25785428,25797953,25823505,25826409,25828776,25832917,25835296,25843735,25846100,25847430,25851470,25868320,25874286,25876189,25877959,25890756,25891304,25895156,25898307,25902613,25903631,25908322,25910946,25921257,25946137,25947712,25950367,25952286,25955179,25992363,26003265,26004718,26026445,26028566,26030443	25742293,25761135,25763389,25769428,25770176,25770984,25772510,25777781,25780198,25781834,25785491,25798097,25823678,25826499,25828968,25832997,25835443,25843894,25846283,25847652,25851579,25868385,25874414,25876332,25878048,25890875,25891412,25895280,25898461,25902736,25903831,25908432,25911050,25921409,25946250,25947828,25950450,25952423,25955364,25992493,26003309,26004855,26027690,26028595,26030644	Gene ID= ENSG00000133454.15 TPM= 36.12 Transcript Type= NA
chr22	25742234	26030644	25742234	26030644	+	ENST00000407587.6@MYO18B	ENST00000407587.6	protein_coding	25742234,25760984,25763231,25768115,25770110,25770872,25772334,25777583,25780056,25781734,25785428,25797953,25823505,25826409,25828776,25832917,25835293,25843735,25846100,25847430,25851470,25868320,25874286,25876189,25877959,25890756,25891304,25895156,25898307,25902613,25903631,25908322,25910946,25921257,25946137,25947712,25950367,25952286,25955179,25992363,26003265,26004718,26026445,26030443	25742293,25761131,25763389,25769428,25770176,25770984,25772510,25777781,25780198,25781834,25785491,25798097,25823678,25826499,25828968,25832997,25835443,25843894,25846283,25847652,25851579,25868385,25874414,25876332,25878048,25890875,25891412,25895280,25898461,25902736,25903831,25908432,25911050,25921409,25946250,25947828,25950450,25952423,25955364,25992493,26003309,26004855,26027690,26030644	Gene ID= ENSG00000133454.15 TPM= 240.29 Transcript Type= protein_coding
chr22	25755909	25756885	25755909	25756885	-	transcript864.chr22.nnic@NA	transcript864.chr22.nnic	NA	25755909	25756885	Gene ID= novel_gene_chr22_865 TPM= 1.93 Transcript Type= NA
chr22	25956214	25959104	25956214	25959104	-	transcript862.chr22.nnic@NA	transcript862.chr22.nnic	NA	25956214	25959104	Gene ID= novel_gene_chr22_863 TPM= 3.86 Transcript Type= NA
chr22	26452083	26479546	26452083	26479546	-	ENST00000464362.5@HPS4	ENST00000464362.5	protein_coding	26479265,26476993,26472832,26472302,26471213,26470719,26468551,26465455,26463917,26458445,26457859,26452083	26479546,26477136,26472939,26472418,26471388,26470813,26468623,26466262,26464826,26458577,26457967,26453404	Gene ID= ENSG00000100099.20 TPM= 5.79 Transcript Type= nonsense_mediated_decay
chr22	26483858	26494655	26483858	26494655	+	transcript888.chr22.nnic@SRRD	transcript888.chr22.nnic	protein_coding	26483858,26486023,26488029,26488390,26490044,26491025,26491463,26494202	26484099,26486063,26488288,26488488,26490198,26491070,26491934,26494655	Gene ID= ENSG00000100104.13 TPM= 1.93 Transcript Type= NA
chr22	26483877	26494658	26483877	26494658	+	ENST00000215917.11@SRRD	ENST00000215917.11	protein_coding	26483877,26486023,26488029,26488390,26490044,26491025,26491463	26484099,26486063,26488288,26488488,26490198,26491070,26494658	Gene ID= ENSG00000100104.13 TPM= 19.31 Transcript Type= protein_coding
chr22	26491225	26512505	26491225	26512505	-	ENST00000407690.5@TFIP11	ENST00000407690.5	protein_coding	26512394,26512099,26510617,26510064,26506775,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491225	26512505,26512175,26510702,26510281,26506928,26506459,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368	Gene ID= ENSG00000100109.16 TPM= 7.72 Transcript Type= protein_coding
chr22	26491927	26512496	26491927	26512496	-	ENST00000407148.5@TFIP11	ENST00000407148.5	protein_coding	26512394,26512099,26510064,26506775,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491927	26512496,26512175,26510281,26506928,26506459,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368	Gene ID= ENSG00000100109.16 TPM= 17.38 Transcript Type= protein_coding
chr22	26512537	26514568	26512537	26514568	+	ENST00000566814.1@Z95115.1	ENST00000566814.1	antisense_RNA	26512537	26514568	Gene ID= ENSG00000261188.1 TPM= 5.79 Transcript Type= antisense_RNA
chr22	26525746	26590138	26525746	26590138	-	transcript903.chr22.nnic@TPST2	transcript903.chr22.nnic	protein_coding	26590053,26544604,26540789,26536288,26534921,26532695,26528214,26525746	26590138,26544675,26541718,26536486,26534977,26532745,26528262,26526267	Gene ID= ENSG00000128294.15 TPM= 3.21 Transcript Type= NA
chr22	26525773	26590138	26525773	26590138	-	transcript905.chr22.nnic@TPST2	transcript905.chr22.nnic	protein_coding	26590053,26544604,26540789,26536288,26532695,26528214,26527606,26525773	26590138,26544675,26541718,26536486,26532745,26528262,26527687,26526267	Gene ID= ENSG00000128294.15 TPM= 16.73 Transcript Type= NA
chr22	26521983	26590163	26521983	26590163	-	ENST00000338754.8@TPST2	ENST00000338754.8	protein_coding	26590053,26544604,26540789,26536288,26532695,26528214,26521983	26590163,26544675,26541718,26536486,26532745,26528262,26526267	Gene ID= ENSG00000128294.15 TPM= 4.83 Transcript Type= protein_coding
chr22	26525746	26590104	26525746	26590104	-	transcript911.chr22.nic@TPST2	transcript911.chr22.nic	protein_coding	26590053,26540789,26536288,26532695,26528214,26525746	26590104,26541718,26536486,26532745,26528262,26526267	Gene ID= ENSG00000128294.15 TPM= 8.04 Transcript Type= NA
chr22	26540067	26590138	26540067	26590138	-	transcript913.chr22.nic@TPST2	transcript913.chr22.nic	protein_coding	26590053,26544604,26540067	26590138,26544675,26541718	Gene ID= ENSG00000128294.15 TPM= 4.83 Transcript Type= NA
chr22	26672781	26722169	26672781	26722169	+	transcript918.chr22.nnic@MIATNB	transcript918.chr22.nnic	lincRNA	26672781,26717253,26721650	26672987,26717459,26722169	Gene ID= ENSG00000244625.5 TPM= 1.93 Transcript Type= NA
chr22	27748277	27801498	27748277	27801498	-	ENST00000302326.4@MN1	ENST00000302326.4	protein_coding	27796763,27748277	27801498,27751096	Gene ID= ENSG00000169184.5 TPM= 109.08 Transcript Type= protein_coding
chr22	27851670	27919306	27851670	27919306	-	ENST00000455418.7@PITPNB	ENST00000455418.7	protein_coding	27919172,27914317,27910964,27897801,27896552,27894555,27873738,27860131,27858387,27854854,27851670	27919306,27914347,27911109,27897892,27896634,27894638,27873815,27860241,27858509,27854939,27853663	Gene ID= ENSG00000180957.17 TPM= 6.27 Transcript Type= protein_coding
chr22	27851670	27919255	27851670	27919255	-	ENST00000320996.14@PITPNB	ENST00000320996.14	protein_coding	27919172,27914317,27910964,27897801,27897130,27896552,27894555,27873738,27860131,27858387,27851670	27919255,27914347,27911109,27897892,27897137,27896626,27894638,27873815,27860241,27858509,27853663	Gene ID= ENSG00000180957.17 TPM= 2.41 Transcript Type= protein_coding
chr22	27919440	27986342	27919440	27986342	+	ENST00000454996.5@TTC28-AS1	ENST00000454996.5	processed_transcript	27919440,27935151,27985692	27919545,27935230,27986342	Gene ID= ENSG00000235954.6 TPM= 1.93 Transcript Type= antisense_RNA
chr22	28742015	28757510	28742015	28757510	+	transcript952.chr22.nnic@HSCB	transcript952.chr22.nnic	protein_coding	28742015,28743882,28751241,28757078	28742331,28743978,28751288,28757510	Gene ID= ENSG00000100209.9 TPM= 2.17 Transcript Type= NA
chr22	28742043	28757510	28742043	28757510	+	transcript953.chr22.nnic@HSCB	transcript953.chr22.nnic	protein_coding	28742043,28751241,28757078	28742331,28751288,28757510	Gene ID= ENSG00000100209.9 TPM= 2.17 Transcript Type= NA
chr22	28742055	28757515	28742055	28757515	+	ENST00000398941.6@HSCB	ENST00000398941.6	protein_coding	28742055,28743882,28744615,28751241,28757078	28742331,28743978,28744709,28751288,28757515	Gene ID= ENSG00000100209.9 TPM= 1.21 Transcript Type= protein_coding
chr22	28742061	28757213	28742061	28757213	+	ENST00000420442.5@HSCB	ENST00000420442.5	protein_coding	28742061,28743882,28744615,28745864,28751241,28757078	28742331,28743978,28744709,28746008,28751288,28757213	Gene ID= ENSG00000100209.9 TPM= 1.21 Transcript Type= nonsense_mediated_decay
chr22	28772745	28785941	28772745	28785941	+	transcript963.chr22.nic@CCDC117	transcript963.chr22.nic	protein_coding	28772745,28773725,28780948,28783508	28773034,28773778,28781172,28785941	Gene ID= ENSG00000159873.9 TPM= 1.93 Transcript Type= NA
chr22	28781338	28789295	28781338	28789295	+	transcript966.chr22.nnic@CCDC117	transcript966.chr22.nnic	protein_coding	28781338,28783506,28786089	28783181,28783645,28789295	Gene ID= ENSG00000159873.9 TPM= 10.62 Transcript Type= NA
chr22	28772674	28789295	28772674	28789295	+	ENST00000249064.8@CCDC117	ENST00000249064.8	protein_coding	28772674,28773725,28780948,28783508,28786089	28773034,28773778,28781172,28783645,28789295	Gene ID= ENSG00000159873.9 TPM= 60.81 Transcript Type= protein_coding
chr22	28794560	28800609	28794560	28800609	-	transcript955.chr22.nnic@XBP1	transcript955.chr22.nnic	protein_coding	28800298,28799057,28797077,28796047,28795259,28794560	28800609,28799153,28797205,28796192,28795732,28795219	Gene ID= ENSG00000100219.16 TPM= 11.58 Transcript Type= NA
chr22	28794555	28800597	28794555	28800597	-	ENST00000216037.10@XBP1	ENST00000216037.10	protein_coding	28800298,28799057,28797077,28796047,28794555	28800597,28799153,28797205,28796192,28795732	Gene ID= ENSG00000100219.16 TPM= 363.92 Transcript Type= protein_coding
chr22	28794557	28800558	28794557	28800558	-	ENST00000403532.7@XBP1	ENST00000403532.7	protein_coding	28800298,28799042,28797077,28796047,28794557	28800558,28799153,28797205,28796192,28795732	Gene ID= ENSG00000100219.16 TPM= 15.44 Transcript Type= protein_coding
chr22	28795175	28800524	28795175	28800524	-	ENST00000344347.5@XBP1	ENST00000344347.5	protein_coding	28800298,28799057,28797077,28796148,28796047,28795175	28800524,28799153,28797205,28796192,28796121,28795732	Gene ID= ENSG00000100219.16 TPM= 1.93 Transcript Type= protein_coding
chr22	29073078	29146820	29073078	29146820	+	ENST00000400335.8@KREMEN1	ENST00000400335.8	protein_coding	29073078,29094258,29098862,29121357,29125263,29137342,29138624,29140282,29141944	29073227,29094420,29098953,29121481,29125416,29137674,29138782,29140366,29146820	Gene ID= ENSG00000183762.12 TPM= 27.99 Transcript Type= protein_coding
chr22	29259852	29267980	29259852	29267980	-	transcript1037.chr22.nic@RHBDD3	transcript1037.chr22.nic	protein_coding	29267748,29267426,29263835,29260702,29260326,29259852	29267980,29267577,29265668,29260864,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 18.82 Transcript Type= NA
chr22	29259852	29267995	29259852	29267995	-	transcript1039.chr22.nnic@RHBDD3	transcript1039.chr22.nnic	protein_coding	29267748,29267426,29265479,29260326,29259852	29267995,29267577,29265668,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 1.93 Transcript Type= NA
chr22	29259852	29267969	29259852	29267969	-	transcript1040.chr22.nic@RHBDD3	transcript1040.chr22.nic	protein_coding	29267748,29267426,29263835,29260326,29259852	29267969,29267577,29265668,29260864,29260237	Gene ID= ENSG00000100263.13 TPM= 4.34 Transcript Type= NA
chr22	29259852	29267978	29259852	29267978	-	ENST00000216085.11@RHBDD3	ENST00000216085.11	protein_coding	29267748,29267426,29265479,29263835,29260702,29260326,29259852	29267978,29267577,29265668,29264218,29260864,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 26.06 Transcript Type= protein_coding
chr22	29267962	29300522	29267962	29300522	+	transcript992.chr22.nic@EWSR1	transcript992.chr22.nic	protein_coding	29267962,29272216,29272380,29273741,29274265,29278030,29282390,29286923,29288606,29291562,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29274282,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300522	Gene ID= ENSG00000182944.17 TPM= 22 Transcript Type= NA
chr22	29268018	29300525	29268018	29300525	+	ENST00000397938.6@EWSR1	ENST00000397938.6	protein_coding	29268018,29272216,29272380,29273741,29278030,29282390,29286923,29288606,29291562,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300525	Gene ID= ENSG00000182944.17 TPM= 119.7 Transcript Type= protein_coding
chr22	29268273	29300336	29268273	29300336	+	ENST00000406548.5@EWSR1	ENST00000406548.5	protein_coding	29268273,29272216,29272380,29273741,29278030,29282390,29286923,29288606,29291565,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300336	Gene ID= ENSG00000182944.17 TPM= 55.36 Transcript Type= protein_coding
chr22	29268316	29300343	29268316	29300343	+	ENST00000414183.6@EWSR1	ENST00000414183.6	protein_coding	29268316,29272216,29272380,29273741,29274265,29278030,29282390,29286923,29288606,29291565,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29274282,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300343	Gene ID= ENSG00000182944.17 TPM= 21.57 Transcript Type= protein_coding
chr22	29268326	29300336	29268326	29300336	+	ENST00000332035.10@EWSR1	ENST00000332035.10	protein_coding	29268326,29272216,29272380,29273741,29278030,29286923,29288606,29291562,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29278216,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300336	Gene ID= ENSG00000182944.17 TPM= 3.48 Transcript Type= protein_coding
chr22	29290830	29300525	29290830	29300525	+	ENST00000469669.5@EWSR1	ENST00000469669.5	protein_coding	29290830,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300525	Gene ID= ENSG00000182944.17 TPM= 1.85 Transcript Type= retained_intron
chr22	29306582	29312785	29306582	29312785	+	ENST00000616432.4@GAS2L1	ENST00000616432.4	protein_coding	29306582,29308087,29310439,29310638,29310827,29311462	29307153,29308738,29310546,29310734,29310998,29312785	Gene ID= ENSG00000185340.15 TPM= 11.58 Transcript Type= protein_coding
chr22	29327682	29388583	29327682	29388583	-	ENST00000357586.6@AP1B1	ENST00000357586.6	protein_coding	29388424,29367207,29363001,29359824,29358726,29356426,29354650,29351705,29351171,29350035,29349218,29342285,29341501,29340656,29339754,29338990,29334265,29331787,29331449,29330623,29330378,29329712,29327682	29388583,29367270,29363106,29359959,29358971,29356616,29354871,29351825,29351266,29350150,29349383,29342383,29341760,29340857,29339774,29339133,29334410,29331916,29331533,29330709,29330532,29329720,29328895	Gene ID= ENSG00000100280.16 TPM= 12.07 Transcript Type= protein_coding
chr22	29327682	29388583	29327682	29388583	-	ENST00000432560.6@AP1B1	ENST00000432560.6	protein_coding	29388424,29367207,29363001,29359824,29358726,29356426,29354650,29351705,29351171,29350035,29349218,29342285,29341501,29340656,29338990,29334265,29331787,29331449,29330623,29330378,29327682	29388583,29367270,29363106,29359959,29358971,29356616,29354871,29351825,29351266,29350150,29349383,29342383,29341760,29340857,29339133,29334410,29331916,29331533,29330709,29330532,29328895	Gene ID= ENSG00000100280.16 TPM= 14.96 Transcript Type= protein_coding
chr22	29502196	29503756	29502196	29503756	+	transcript1057.chr22.nnic@NA	transcript1057.chr22.nnic	NA	29502196	29503756	Gene ID= novel_gene_chr22_1058 TPM= 2.9 Transcript Type= NA
chr22	29508329	29553750	29508329	29553750	-	transcript1060.chr22.nic@THOC5	transcript1060.chr22.nic	protein_coding	29553671,29550728,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29531078,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508329	29553750,29550843,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29531110,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 3.06 Transcript Type= NA
chr22	29508168	29553772	29508168	29553772	-	transcript1061.chr22.nic@THOC5	transcript1061.chr22.nic	protein_coding	29553671,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29531078,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508168	29553772,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29531110,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 10.78 Transcript Type= NA
chr22	29508329	29553673	29508329	29553673	-	transcript1062.chr22.nic@THOC5	transcript1062.chr22.nic	protein_coding	29553448,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29531078,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508329	29553673,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29531110,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 2.09 Transcript Type= NA
chr22	29505879	29553782	29505879	29553782	-	ENST00000490103.5@THOC5	ENST00000490103.5	protein_coding	29553671,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29505879	29553782,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 1.13 Transcript Type= protein_coding
chr22	29508358	29553766	29508358	29553766	-	ENST00000397873.6@THOC5	ENST00000397873.6	protein_coding	29553671,29550728,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508358	29553766,29550843,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 2.09 Transcript Type= protein_coding
chr22	29554808	29581337	29554808	29581337	-	ENST00000216121.11@NIPSNAP1	ENST00000216121.11	protein_coding	29580985,29570405,29570162,29569193,29561792,29561506,29561171,29560734,29558870,29554808	29581337,29570532,29570207,29569287,29561862,29561646,29561202,29560828,29558953,29555999	Gene ID= ENSG00000184117.11 TPM= 1.93 Transcript Type= protein_coding
chr22	29730956	29766979	29730956	29766979	-	transcript1108.chr22.nnic@ZMAT5	transcript1108.chr22.nnic	protein_coding	29766872,29754749,29748418,29742418,29740650,29738330,29730956	29766979,29754863,29748571,29742480,29740730,29738441,29731354	Gene ID= ENSG00000100319.12 TPM= 2.41 Transcript Type= NA
chr22	29730956	29766995	29730956	29766995	-	transcript1109.chr22.nnic@ZMAT5	transcript1109.chr22.nnic	protein_coding	29766949,29754749,29748418,29742418,29740650,29738330,29730956	29766995,29754863,29748571,29742480,29740730,29738441,29731354	Gene ID= ENSG00000100319.12 TPM= 2.41 Transcript Type= NA
chr22	29730956	29768056	29730956	29768056	-	transcript1112.chr22.nic@ZMAT5	transcript1112.chr22.nic	protein_coding	29766949,29748418,29742418,29740650,29738330,29730956	29768056,29748571,29742480,29740730,29738441,29731354	Gene ID= ENSG00000100319.12 TPM= 11.58 Transcript Type= NA
chr22	29730956	29766961	29730956	29766961	-	ENST00000344318.3@ZMAT5	ENST00000344318.3	protein_coding	29766872,29748418,29742418,29740650,29738330,29730956	29766961,29748571,29742480,29740730,29738441,29731354	Gene ID= ENSG00000100319.12 TPM= 12.55 Transcript Type= protein_coding
chr22	29767369	29770413	29767369	29770413	+	ENST00000330029.6@UQCR10	ENST00000330029.6	protein_coding	29767369,29769678	29767548,29770413	Gene ID= ENSG00000184076.13 TPM= 63.71 Transcript Type= protein_coding
chr22	29788611	29838310	29788611	29838310	-	transcript1097.chr22.nic@ASCC2	transcript1097.chr22.nic	protein_coding	29838178,29832245,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788611	29838310,29832342,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 60.79 Transcript Type= NA
chr22	29788608	29838274	29788608	29838274	-	ENST00000307790.7@ASCC2	ENST00000307790.7	protein_coding	29838178,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788608	29838274,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 91.35 Transcript Type= protein_coding
chr22	29788642	29838276	29788642	29838276	-	ENST00000397771.6@ASCC2	ENST00000397771.6	protein_coding	29838178,29834489,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788642	29838276,29834550,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 5.11 Transcript Type= protein_coding
chr22	29883144	30026037	29883144	30026037	+	transcript1130.chr22.nic@MTMR3	transcript1130.chr22.nic	protein_coding	29883144,29957036,29970976,29978442,29978936,29988480,29991504,29998761,30002880,30007114,30007901,30009018,30012368,30013356,30016528,30017927,30019480,30022029,30022609,30023457,30025630	29883359,29957088,29971062,29978531,29979052,29988562,29991670,29998857,30002993,30007319,30008032,30009129,30012563,30013541,30016698,30018072,30020884,30022139,30022697,30023483,30026037	Gene ID= ENSG00000100330.15 TPM= 10.62 Transcript Type= NA
chr22	30026595	30030506	30026595	30030506	+	transcript1137.chr22.nnic@NA	transcript1137.chr22.nnic	NA	30026595	30030506	Gene ID= novel_gene_chr22_1138 TPM= 3.86 Transcript Type= NA
chr22	30285117	30289627	30285117	30289627	-	ENST00000407689.7@CASTOR1	ENST00000407689.7	protein_coding	30289385,30288706,30287373,30287155,30286825,30286263,30286016,30285832,30285117	30289627,30288776,30287560,30287287,30286948,30286376,30286098,30285926,30285688	Gene ID= ENSG00000239282.7 TPM= 4.83 Transcript Type= protein_coding
chr22	30291990	30327046	30291990	30327046	-	ENST00000215790.11@TBC1D10A	ENST00000215790.11	protein_coding	30326673,30304531,30299444,30295737,30294941,30294796,30293921,30293651,30291990	30327046,30304630,30299551,30295843,30295055,30294861,30294110,30293805,30292851	Gene ID= ENSG00000099992.15 TPM= 4.83 Transcript Type= protein_coding
chr22	30331988	30356947	30331988	30356947	-	ENST00000215793.12@SF3A1	ENST00000215793.12	protein_coding	30356730,30352951,30346312,30344933,30342805,30342200,30341692,30340695,30340196,30339130,30338789,30337690,30337026,30335652,30335467,30331988	30356947,30353072,30346519,30345190,30342879,30342350,30341885,30340812,30340381,30339251,30339034,30337897,30337180,30335753,30335538,30334695	Gene ID= ENSG00000099995.18 TPM= 25.1 Transcript Type= protein_coding
chr22	30356635	30367096	30356635	30367096	+	ENST00000399824.6@CCDC157	ENST00000399824.6	protein_coding	30356635,30361961,30365990	30357132,30362114,30367096	Gene ID= ENSG00000187860.10 TPM= 1.93 Transcript Type= protein_coding
chr22	30378817	30387388	30378817	30387388	-	ENST00000382363.7@RNF215	ENST00000382363.7	protein_coding	30387029,30386616,30386070,30385904,30384339,30380282,30380062,30379711,30378817	30387388,30386759,30386141,30385989,30384495,30380401,30380205,30379813,30379622	Gene ID= ENSG00000099999.14 TPM= 24.13 Transcript Type= protein_coding
chr22	30425797	30429053	30425797	30429053	+	transcript1158.chr22.nnic@MTFP1	transcript1158.chr22.nnic	protein_coding	30425797,30426717,30427102,30428462	30425946,30426844,30427403,30429053	Gene ID= ENSG00000242114.5 TPM= 1.93 Transcript Type= NA
chr22	30425530	30429053	30425530	30429053	+	ENST00000266263.9@MTFP1	ENST00000266263.9	protein_coding	30425530,30426717,30427171,30428462	30425946,30426844,30427403,30429053	Gene ID= ENSG00000242114.5 TPM= 47.3 Transcript Type= protein_coding
chr22	30425776	30429053	30425776	30429053	+	ENST00000355143.8@MTFP1	ENST00000355143.8	protein_coding	30425776,30426717,30428462	30425946,30426844,30429053	Gene ID= ENSG00000242114.5 TPM= 12.55 Transcript Type= protein_coding
chr22	30576625	30591940	30576625	30591940	-	ENST00000354694.11@PES1	ENST00000354694.11	protein_coding	30591810,30589191,30588021,30587286,30584546,30584365,30581528,30581334,30581012,30580571,30580053,30579751,30579137,30578837,30576625	30591940,30589270,30588174,30587395,30584717,30584454,30581644,30581408,30581101,30580701,30580178,30579935,30579303,30578998,30577129	Gene ID= ENSG00000100029.17 TPM= 75.78 Transcript Type= protein_coding
chr22	30576665	30591880	30576665	30591880	-	ENST00000402284.7@PES1	ENST00000402284.7	protein_coding	30591810,30589191,30588021,30587286,30584546,30584416,30581528,30581334,30581012,30580571,30580053,30579751,30579137,30578837,30576665	30591880,30589270,30588174,30587395,30584717,30584454,30581644,30581408,30581101,30580701,30580178,30579935,30579303,30578998,30577129	Gene ID= ENSG00000100029.17 TPM= 2.41 Transcript Type= protein_coding
chr22	30583171	30585701	30583171	30585701	+	transcript1170.chr22.nnic@NA	transcript1170.chr22.nnic	NA	30583171	30585701	Gene ID= novel_gene_chr22_1171 TPM= 1.93 Transcript Type= NA
chr22	30607204	30627060	30607204	30627060	+	ENST00000407817.3@TCN2	ENST00000407817.3	protein_coding	30607204,30610871,30612873,30614349,30615301,30615601,30617330,30622968,30626460	30607395,30611063,30612961,30614501,30615473,30615787,30617495,30623083,30627060	Gene ID= ENSG00000185339.8 TPM= 2.9 Transcript Type= protein_coding
chr22	30635758	30647891	30635758	30647891	+	transcript1179.chr22.nnic@SLC35E4	transcript1179.chr22.nnic	protein_coding	30635758,30637304,30646598	30637069,30637404,30647891	Gene ID= ENSG00000100036.12 TPM= 2.9 Transcript Type= NA
chr22	30635652	30647893	30635652	30647893	+	ENST00000343605.4@SLC35E4	ENST00000343605.4	protein_coding	30635652,30646598	30637069,30647893	Gene ID= ENSG00000100036.12 TPM= 55.99 Transcript Type= protein_coding
chr22	30694850	30907824	30694850	30907824	+	transcript1187.chr22.nnic@OSBP2	transcript1187.chr22.nnic	protein_coding	30694850,30741161,30870429,30887426,30888223,30889177,30890728,30893122,30893463,30893638,30893817,30905837,30906197	30695553,30741369,30870682,30887618,30888340,30889234,30890973,30893242,30893566,30893733,30894001,30906069,30907824	Gene ID= ENSG00000184792.15 TPM= 1.93 Transcript Type= NA
chr22	30887997	30926580	30887997	30926580	+	transcript1192.chr22.nnic@OSBP2	transcript1192.chr22.nnic	protein_coding	30887997,30911298,30924752	30890190,30911431,30926580	Gene ID= ENSG00000184792.15 TPM= 7.72 Transcript Type= NA
chr22	30968091	30969054	30968091	30969054	-	transcript1202.chr22.nnic@NA	transcript1202.chr22.nnic	NA	30968091	30969054	Gene ID= novel_gene_chr22_1203 TPM= 1.93 Transcript Type= NA
chr22	30972901	30976081	30972901	30976081	+	ENST00000602971.1@TUG1	ENST00000602971.1	antisense_RNA	30972901,30975170	30973587,30976081	Gene ID= ENSG00000253352.8 TPM= 2.9 Transcript Type= antisense_RNA
chr22	31081318	31104623	31081318	31104623	+	transcript1204.chr22.nic@SMTN	transcript1204.chr22.nic	protein_coding	31081318,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31093784,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31100885,31104316	31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31093876,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31101049,31104623	Gene ID= ENSG00000183963.18 TPM= 4.34 Transcript Type= NA
chr22	31081319	31104624	31081319	31104624	+	ENST00000333137.11@SMTN	ENST00000333137.11	protein_coding	31081319,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31100885,31104316	31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31101049,31104624	Gene ID= ENSG00000183963.18 TPM= 18.34 Transcript Type= protein_coding
chr22	31081319	31104624	31081319	31104624	+	ENST00000347557.6@SMTN	ENST00000347557.6	protein_coding	31081319,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31104316	31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31104624	Gene ID= ENSG00000183963.18 TPM= 2.9 Transcript Type= protein_coding
chr22	31093337	31104623	31093337	31104623	+	transcript1212.chr22.nnic@SMTN	transcript1212.chr22.nnic	protein_coding	31093337,31095303,31095534,31097269,31098667,31099745,31100885,31104316	31093876,31095455,31095609,31097338,31098840,31099896,31101049,31104623	Gene ID= ENSG00000183963.18 TPM= 2.41 Transcript Type= NA
chr22	31093358	31104623	31093358	31104623	+	ENST00000404574.5@SMTN	ENST00000404574.5	protein_coding	31093358,31095303,31095534,31097269,31098667,31099062,31099745,31100885,31104316	31093876,31095455,31095609,31097338,31098840,31099179,31099896,31101049,31104623	Gene ID= ENSG00000183963.18 TPM= 24.13 Transcript Type= protein_coding
chr22	31104777	31107568	31104777	31107568	-	ENST00000400299.6@SELENOM	ENST00000400299.6	protein_coding	31107377,31105930,31105658,31105208,31104777	31107568,31105965,31105692,31105286,31105128	Gene ID= ENSG00000198832.10 TPM= 70.47 Transcript Type= protein_coding
chr22	31125491	31134696	31125491	31134696	+	transcript1220.chr22.nic@INPP5J	transcript1220.chr22.nic	protein_coding	31125491,31126376,31126613,31126921,31127357,31127951,31128214,31128471,31133098,31133406,31133610,31133913	31126010,31126489,31126721,31127037,31127532,31128062,31128323,31128654,31133235,31133483,31133714,31134696	Gene ID= ENSG00000185133.13 TPM= 5.79 Transcript Type= NA
chr22	31160163	31207013	31160163	31207013	+	transcript1225.chr22.nnic@RNF185	transcript1225.chr22.nnic	protein_coding	31160163,31176262,31187047,31192684,31195469,31196936,31201498,31204489	31160303,31176417,31187270,31192702,31195581,31196990,31201615,31207013	Gene ID= ENSG00000138942.15 TPM= 14.24 Transcript Type= NA
chr22	31160157	31207013	31160157	31207013	+	transcript1232.chr22.nic@RNF185	transcript1232.chr22.nic	protein_coding	31160157,31192684,31195469,31196936,31201498,31204489	31160303,31192702,31195581,31196990,31201615,31207013	Gene ID= ENSG00000138942.15 TPM= 7.48 Transcript Type= NA
chr22	31160193	31207019	31160193	31207019	+	ENST00000326132.10@RNF185	ENST00000326132.10	protein_coding	31160193,31187047,31192684,31195469,31196936,31201498,31204489	31160303,31187270,31192702,31195581,31196990,31201615,31207019	Gene ID= ENSG00000138942.15 TPM= 35.48 Transcript Type= protein_coding
chr22	31160211	31207013	31160211	31207013	+	ENST00000426256.6@RNF185	ENST00000426256.6	protein_coding	31160211,31187047,31192684,31195469,31196936,31201498,31204489	31160303,31187270,31192702,31195581,31197158,31201615,31207013	Gene ID= ENSG00000138942.15 TPM= 4.59 Transcript Type= protein_coding
chr22	31212295	31280080	31212295	31280080	+	ENST00000331728.8@LIMK2	ENST00000331728.8	protein_coding	31212295,31225720,31258291,31259121,31259889,31262134,31262595,31265946,31266984,31267776,31268144,31271136,31272530,31273452,31275151,31278297	31212424,31225819,31258426,31259230,31260077,31262239,31262791,31266132,31267070,31267907,31268200,31271201,31272704,31273507,31275308,31280080	Gene ID= ENSG00000182541.17 TPM= 4.83 Transcript Type= protein_coding
chr22	31281593	31292528	31281593	31292528	-	ENST00000215912.9@PIK3IP1	ENST00000215912.9	protein_coding	31292275,31291180,31290965,31289499,31289315,31281593	31292528,31291296,31291084,31289699,31289393,31283288	Gene ID= ENSG00000100100.12 TPM= 5.79 Transcript Type= protein_coding
chr22	31399523	31434452	31399523	31434452	+	ENST00000331457.8@DRG1	ENST00000331457.8	protein_coding	31399523,31400620,31403029,31411012,31420256,31423280,31426615,31427060,31433872	31399725,31400743,31403204,31411081,31420425,31423410,31426782,31427182,31434452	Gene ID= ENSG00000185721.12 TPM= 160.24 Transcript Type= protein_coding
chr22	31439367	31489855	31439367	31489855	-	transcript1246.chr22.nnic@EIF4ENIF1	transcript1246.chr22.nnic	protein_coding	31489694,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454144,31450289,31449348,31448153,31447426,31444606,31442962,31441774,31440704,31439367	31489855,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454352,31450360,31449531,31448232,31447565,31444690,31443094,31442118,31440868,31440121	Gene ID= ENSG00000184708.17 TPM= 3.46 Transcript Type= NA
chr22	31454058	31489611	31454058	31489611	-	transcript1261.chr22.nic@EIF4ENIF1	transcript1261.chr22.nic	protein_coding	31489391,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454058	31489611,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454376	Gene ID= ENSG00000184708.17 TPM= 1.93 Transcript Type= NA
chr22	31454058	31489855	31454058	31489855	-	transcript1262.chr22.nic@EIF4ENIF1	transcript1262.chr22.nic	protein_coding	31489694,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454058	31489855,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454376	Gene ID= ENSG00000184708.17 TPM= 2.9 Transcript Type= NA
chr22	31439369	31489741	31439369	31489741	-	ENST00000330125.9@EIF4ENIF1	ENST00000330125.9	protein_coding	31489694,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454144,31450289,31449348,31448153,31447426,31444606,31442962,31441774,31440704,31439369	31489741,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454376,31450360,31449531,31448232,31447565,31444690,31443094,31442118,31440868,31440121	Gene ID= ENSG00000184708.17 TPM= 6.03 Transcript Type= protein_coding
chr22	31439367	31489587	31439367	31489587	-	ENST00000397525.5@EIF4ENIF1	ENST00000397525.5	protein_coding	31489391,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454144,31450289,31449348,31448153,31447426,31444606,31442962,31441774,31440704,31439367	31489587,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454376,31450360,31449531,31448232,31447565,31444690,31443094,31442118,31440868,31440121	Gene ID= ENSG00000184708.17 TPM= 2.49 Transcript Type= protein_coding
chr22	31489918	31490505	31489918	31490505	+	transcript1270.chr22.nnic@NA	transcript1270.chr22.nnic	NA	31489918	31490505	Gene ID= novel_gene_chr22_1271 TPM= 1.93 Transcript Type= NA
chr22	31618491	31630833	31618491	31630833	-	transcript1285.chr22.nic@PISD	transcript1285.chr22.nic	protein_coding	31630804,31625763,31623684,31621649,31621334,31620996,31620553,31618491	31630833,31626016,31623849,31621885,31621472,31621142,31620713,31619836	Gene ID= ENSG00000241878.11 TPM= 6.11 Transcript Type= NA
chr22	31619103	31662432	31619103	31662432	-	ENST00000439502.6@PISD	ENST00000439502.6	protein_coding	31662144,31650699,31648101,31621649,31621334,31620996,31620553,31619103	31662432,31650778,31648276,31621885,31621472,31621142,31620713,31619836	Gene ID= ENSG00000241878.11 TPM= 3.86 Transcript Type= protein_coding
chr22	31618491	31662241	31618491	31662241	-	transcript1288.chr22.nnic@PISD	transcript1288.chr22.nnic	protein_coding	31662144,31650699,31648101,31621334,31620996,31620553,31618491	31662241,31650778,31648276,31621472,31621142,31620713,31619836	Gene ID= ENSG00000241878.11 TPM= 4.18 Transcript Type= NA
chr22	31618491	31662215	31618491	31662215	-	ENST00000460723.5@PISD	ENST00000460723.5	protein_coding	31662144,31650699,31648101,31621334,31620996,31620553,31618491	31662215,31650778,31648276,31621885,31621142,31620713,31619836	Gene ID= ENSG00000241878.11 TPM= 3.21 Transcript Type= retained_intron
chr22	31683082	31685464	31683082	31685464	+	transcript1291.chr22.nnic@NA	transcript1291.chr22.nnic	NA	31683082	31685464	Gene ID= novel_gene_chr22_1292 TPM= 1.93 Transcript Type= NA
chr22	31944966	31957603	31944966	31957603	+	ENST00000471374.1@YWHAH	ENST00000471374.1	protein_coding	31944966,31956139	31945235,31957603	Gene ID= ENSG00000128245.14 TPM= 1.93 Transcript Type= processed_transcript
chr22	31944461	31957603	31944461	31957603	+	ENST00000248975.5@YWHAH	ENST00000248975.5	protein_coding	31944461,31956139	31944820,31957603	Gene ID= ENSG00000128245.14 TPM= 110.05 Transcript Type= protein_coding
chr22	32387582	32412255	32387582	32412255	-	ENST00000216038.5@RTCB	ENST00000216038.5	protein_coding	32412064,32408755,32408175,32406662,32401747,32399603,32397941,32396074,32395026,32393892,32392240,32387582	32412255,32408833,32408242,32406761,32401903,32399759,32398100,32396249,32395214,32394002,32392359,32388099	Gene ID= ENSG00000100220.11 TPM= 228.78 Transcript Type= protein_coding
chr22	32474676	32498829	32474676	32498829	+	ENST00000266087.11@FBXO7	ENST00000266087.11	protein_coding	32474676,32478981,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475124,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 60.52 Transcript Type= protein_coding
chr22	32474676	32498829	32474676	32498829	+	ENST00000420700.5@FBXO7	ENST00000420700.5	protein_coding	32474676,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475124,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 19.5 Transcript Type= nonsense_mediated_decay
chr22	32474798	32498829	32474798	32498829	+	ENST00000425028.5@FBXO7	ENST00000425028.5	protein_coding	32474798,32479133,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475124,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 3.09 Transcript Type= nonsense_mediated_decay
chr22	32475257	32498829	32475257	32498829	+	ENST00000397426.5@FBXO7	ENST00000397426.5	protein_coding	32475257,32478981,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475398,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 4.54 Transcript Type= protein_coding
chr22	32801701	32863043	32801701	32863043	+	ENST00000266085.6@TIMP3	ENST00000266085.6	protein_coding	32801701,32849452,32857249,32858017,32859180	32802122,32849534,32857360,32858138,32863043	Gene ID= ENSG00000100234.11 TPM= 110.05 Transcript Type= protein_coding
chr22	33273089	33873220	33273089	33873220	-	transcript1322.chr22.nic@LARGE1	transcript1322.chr22.nic	protein_coding	33873108,33856740,33761371,33650367,33626244,33604435,33564848,33432161,33384192,33381919,33337646,33316085,33304229,33283202,33277060,33273089	33873220,33856802,33761558,33650668,33626326,33604558,33565019,33432265,33384304,33382044,33337801,33316248,33304507,33283348,33277255,33274624	Gene ID= ENSG00000133424.20 TPM= 37.16 Transcript Type= NA
chr22	33273076	33920428	33273076	33920428	-	ENST00000397394.6@LARGE1	ENST00000397394.6	protein_coding	33919995,33761371,33650367,33626244,33604435,33564848,33432161,33384192,33381919,33337646,33316085,33304229,33283202,33277060,33273076	33920428,33761558,33650668,33626326,33604558,33565019,33432265,33384304,33382044,33337801,33316248,33304507,33283348,33277255,33274624	Gene ID= ENSG00000133424.20 TPM= 50.68 Transcript Type= protein_coding
chr22	33792496	33796008	33792496	33796008	+	transcript1330.chr22.nnic@NA	transcript1330.chr22.nnic	NA	33792496	33796008	Gene ID= novel_gene_chr22_1331 TPM= 1.93 Transcript Type= NA
chr22	35257487	35295807	35257487	35295807	+	ENST00000418170.5@HMGXB4	ENST00000418170.5	protein_coding	35257487,35262323,35263078,35263796,35263982,35264648,35283962,35285997,35287347,35288238,35292992,35293607	35257557,35262421,35263226,35263874,35264096,35265603,35284043,35286061,35287452,35288407,35293114,35295807	Gene ID= ENSG00000100281.13 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr22	35257415	35295807	35257415	35295807	+	transcript1334.chr22.nic@HMGXB4	transcript1334.chr22.nic	protein_coding	35257415,35263078,35263796,35264648,35283962,35285997,35287347,35288238,35292992,35293607	35257557,35263226,35263874,35265603,35284043,35286061,35287452,35288407,35293114,35295807	Gene ID= ENSG00000100281.13 TPM= 2.9 Transcript Type= NA
chr22	35257485	35265570	35257485	35265570	+	transcript1338.chr22.nic@HMGXB4	transcript1338.chr22.nic	protein_coding	35257485,35262323,35263078,35263796,35264648	35257557,35262421,35263226,35263874,35265570	Gene ID= ENSG00000100281.13 TPM= 1.93 Transcript Type= NA
chr22	35257452	35265570	35257452	35265570	+	ENST00000420166.5@HMGXB4	ENST00000420166.5	protein_coding	35257452,35263078,35263796,35264648	35257557,35263226,35263874,35265570	Gene ID= ENSG00000100281.13 TPM= 2.9 Transcript Type= protein_coding
chr22	35257496	35265567	35257496	35265567	+	ENST00000455359.5@HMGXB4	ENST00000455359.5	protein_coding	35257496,35263078,35263796,35263982,35264648	35257557,35263226,35263874,35264096,35265567	Gene ID= ENSG00000100281.13 TPM= 1.93 Transcript Type= protein_coding
chr22	35299804	35347994	35299804	35347994	+	ENST00000449058.6@TOM1	ENST00000449058.6	protein_coding	35299804,35317877,35321959,35323028,35323496,35323768,35327271,35330347,35332981,35333404,35334328,35338713,35345725,35346930,35347055	35299980,35317961,35322037,35323177,35323630,35323914,35327387,35330480,35333014,35333497,35334448,35338788,35345784,35346969,35347994	Gene ID= ENSG00000100284.20 TPM= 420.15 Transcript Type= protein_coding
chr22	35299884	35347981	35299884	35347981	+	ENST00000424387.5@TOM1	ENST00000424387.5	protein_coding	35299884,35321959,35323028,35323496,35323768,35327271,35330347,35332981,35333404,35334328,35338713,35345725,35346930,35347055	35299980,35322037,35323177,35323630,35323914,35327387,35330480,35333014,35333497,35334448,35338788,35345784,35346969,35347981	Gene ID= ENSG00000100284.20 TPM= 16.65 Transcript Type= nonsense_mediated_decay
chr22	35380835	35394214	35380835	35394214	+	ENST00000216117.8@HMOX1	ENST00000216117.8	protein_coding	35380835,35383106,35386685,35389864,35393468	35381196,35383226,35387176,35389963,35394214	Gene ID= ENSG00000100292.16 TPM= 6.76 Transcript Type= protein_coding
chr22	35400063	35425430	35400063	35425430	+	ENST00000216122.8@MCM5	ENST00000216122.8	protein_coding	35400063,35400431,35403207,35403414,35406553,35408408,35410744,35412510,35413875,35415829,35416339,35416638,35417744,35419884,35421318,35423214,35424154	35400208,35400605,35403333,35403542,35406725,35408563,35410910,35412681,35413986,35415972,35416404,35416814,35417856,35420012,35421460,35423341,35425430	Gene ID= ENSG00000100297.15 TPM= 18.34 Transcript Type= protein_coding
chr22	35540868	35554001	35540868	35554001	+	ENST00000216127.4@RASD2	ENST00000216127.4	protein_coding	35540868,35546801,35551503	35541500,35547080,35554001	Gene ID= ENSG00000100302.6 TPM= 11.58 Transcript Type= protein_coding
chr22	35606764	35617508	35606764	35617508	-	ENST00000397328.5@MB	ENST00000397328.5	protein_coding	35617362,35617163,35610884,35606764	35617508,35617265,35611106,35607443	Gene ID= ENSG00000198125.12 TPM= 1661.75 Transcript Type= protein_coding
chr22	35606764	35623354	35606764	35623354	-	ENST00000359787.5@MB	ENST00000359787.5	protein_coding	35623191,35617163,35610884,35606764	35623354,35617265,35611106,35607443	Gene ID= ENSG00000198125.12 TPM= 176.62 Transcript Type= protein_coding
chr22	35606764	35615713	35606764	35615713	-	ENST00000401702.5@MB	ENST00000401702.5	protein_coding	35615574,35610884,35606764	35615713,35611106,35607443	Gene ID= ENSG00000198125.12 TPM= 100.53 Transcript Type= protein_coding
chr22	35606764	35617456	35606764	35617456	-	ENST00000397326.6@MB	ENST00000397326.6	protein_coding	35617163,35610884,35606764	35617456,35611106,35607443	Gene ID= ENSG00000198125.12 TPM= 835.45 Transcript Type= protein_coding
chr22	35744087	35840438	35744087	35840438	-	transcript1395.chr22.nic@RBFOX2	transcript1395.chr22.nic	protein_coding	35840192,35809780,35781600,35778025,35768257,35765423,35761415,35761202,35759888,35752613,35746473,35745923,35744087	35840438,35810004,35781746,35778078,35768349,35765483,35761468,35761294,35760032,35752655,35746561,35745995,35744249	Gene ID= ENSG00000100320.22 TPM= 2.9 Transcript Type= NA
chr22	36189129	36204840	36189129	36204840	-	ENST00000616056.4@APOL4	ENST00000616056.4	protein_coding	36204628,36201993,36201700,36199330,36195311,36189129	36204840,36202055,36201888,36199376,36195437,36191912	Gene ID= ENSG00000100336.17 TPM= 1.93 Transcript Type= protein_coding
chr22	36226203	36239643	36226203	36239643	-	ENST00000358502.9@APOL2	ENST00000358502.9	protein_coding	36239441,36233402,36233153,36231340,36226203	36239643,36233455,36233241,36231466,36228280	Gene ID= ENSG00000128335.13 TPM= 2.9 Transcript Type= protein_coding
chr22	36253090	36267525	36253090	36267525	+	transcript1402.chr22.nnic@APOL1	transcript1402.chr22.nnic	protein_coding	36253090,36254937,36257083,36257319,36261596,36265151,36266841	36253219,36254999,36257136,36257407,36261722,36266135,36267525	Gene ID= ENSG00000100342.20 TPM= 1.93 Transcript Type= NA
chr22	36281648	36388016	36281648	36388016	-	transcript1411.chr22.nnic@MYH9	transcript1411.chr22.nnic	protein_coding	36387807,36348904,36341370,36327461,36326568,36322429,36321758,36320798,36320220,36319540,36318207,36316517,36314145,36312049,36309282,36308808,36306414,36305930,36305033,36303995,36302568,36301534,36300851,36300127,36298919,36296843,36295505,36294932,36294092,36293759,36293329,36291986,36289085,36288727,36288252,36286718,36285865,36285658,36285121,36284403,36284093,36281648	36388016,36349255,36341526,36327488,36326661,36322521,36321821,36320896,36320363,36319635,36318325,36316669,36314318,36312222,36309396,36308870,36306607,36306051,36305102,36304155,36302676,36301665,36301057,36300264,36299042,36297014,36295717,36295076,36294298,36293863,36293481,36292234,36289297,36288939,36288413,36286846,36285953,36285781,36285329,36284511,36284265,36282785	Gene ID= ENSG00000100345.20 TPM= 7.72 Transcript Type= NA
chr22	36281281	36388018	36281281	36388018	-	ENST00000216181.9@MYH9	ENST00000216181.9	protein_coding	36387807,36348904,36341370,36327461,36326568,36322429,36321758,36320798,36320220,36319540,36318207,36316517,36314145,36312049,36309282,36306414,36305930,36305033,36303995,36302568,36301534,36300851,36300127,36298919,36296843,36295505,36294932,36294092,36293759,36293329,36291986,36289085,36288727,36288252,36286718,36285865,36285658,36285121,36284403,36284093,36281281	36388018,36349255,36341526,36327488,36326661,36322521,36321821,36320896,36320363,36319635,36318325,36316669,36314318,36312222,36309396,36306607,36306051,36305102,36304155,36302676,36301665,36301057,36300264,36299042,36297014,36295717,36295076,36294298,36293863,36293481,36292234,36289297,36288939,36288413,36286846,36285953,36285781,36285329,36284511,36284265,36282785	Gene ID= ENSG00000100345.20 TPM= 83.02 Transcript Type= protein_coding
chr22	36467046	36481634	36467046	36481634	-	ENST00000416967.1@TXN2	ENST00000416967.1	protein_coding	36481564,36480575,36476733,36467046	36481634,36480787,36476856,36467917	Gene ID= ENSG00000100348.9 TPM= 22.61 Transcript Type= protein_coding
chr22	36467036	36482030	36467036	36482030	-	ENST00000216185.6@TXN2	ENST00000216185.6	protein_coding	36481564,36480575,36476733,36467036	36482030,36480837,36476856,36467917	Gene ID= ENSG00000100348.9 TPM= 173.83 Transcript Type= protein_coding
chr22	36487190	36507101	36487190	36507101	-	ENST00000397224.8@FOXRED2	ENST00000397224.8	protein_coding	36507009,36505896,36504515,36504098,36501241,36497991,36495967,36493633,36487190	36507101,36506423,36504766,36504367,36501407,36498156,36496208,36493803,36490267	Gene ID= ENSG00000100350.14 TPM= 1.93 Transcript Type= protein_coding
chr22	36510850	36529436	36510850	36529436	-	ENST00000216190.12@EIF3D	ENST00000216190.12	protein_coding	36529076,36525999,36525664,36524596,36523895,36523209,36520576,36519405,36518763,36517301,36516705,36516478,36512460,36511503,36510850	36529436,36526131,36525709,36524732,36523980,36523281,36520688,36519537,36518910,36517431,36516790,36516607,36512602,36511786,36511000	Gene ID= ENSG00000100353.17 TPM= 164.1 Transcript Type= protein_coding
chr22	36510850	36521790	36510850	36521790	-	transcript1465.chr22.nic@EIF3D	transcript1465.chr22.nic	protein_coding	36520576,36519405,36518763,36517301,36516705,36516478,36512460,36511503,36510850	36521790,36519537,36518910,36517431,36516790,36516607,36512602,36511786,36511000	Gene ID= ENSG00000100353.17 TPM= 24.13 Transcript Type= NA
chr22	36758203	36776133	36758203	36776133	-	ENST00000433985.6@IFT27	ENST00000433985.6	protein_coding	36775674,36767783,36767306,36766138,36763919,36762904,36758203	36776133,36767862,36767365,36766197,36764036,36763013,36758409	Gene ID= ENSG00000100360.14 TPM= 11.58 Transcript Type= protein_coding
chr22	36913628	36940449	36913628	36940449	+	ENST00000403662.7@CSF2RB	ENST00000403662.7	protein_coding	36913628,36922036,36923244,36925987,36929402,36929639,36930375,36930673,36932765,36933832,36935351,36935630,36936549,36937377	36913677,36922283,36923367,36926177,36929559,36929807,36930510,36930830,36932904,36933994,36935441,36935687,36936652,36940449	Gene ID= ENSG00000100368.13 TPM= 1.93 Transcript Type= protein_coding
chr22	37010859	37019527	37010859	37019527	-	ENST00000249042.7@TST	ENST00000249042.7	protein_coding	37019400,37018138,37010859	37019527,37018753,37011325	Gene ID= ENSG00000128311.13 TPM= 21.24 Transcript Type= protein_coding
chr22	37010859	37019467	37010859	37019467	-	ENST00000403892.7@TST	ENST00000403892.7	protein_coding	37018138,37010859	37019467,37011325	Gene ID= ENSG00000128311.13 TPM= 9.65 Transcript Type= protein_coding
chr22	37019749	37029815	37019749	37029815	+	transcript1477.chr22.nnic@MPST	transcript1477.chr22.nnic	protein_coding	37019749,37024192,37025002,37026999,37029216	37019872,37024810,37025077,37027095,37029815	Gene ID= ENSG00000128309.16 TPM= 9.63 Transcript Type= NA
chr22	37019749	37029815	37019749	37029815	+	transcript1489.chr22.nnic@MPST	transcript1489.chr22.nnic	protein_coding	37019749,37024192,37025002,37029216	37019872,37024810,37025077,37029815	Gene ID= ENSG00000128309.16 TPM= 21.7 Transcript Type= NA
chr22	37019749	37029796	37019749	37029796	+	transcript1490.chr22.nic@MPST	transcript1490.chr22.nic	protein_coding	37019749,37024192,37025002,37029216	37019872,37024810,37025127,37029796	Gene ID= ENSG00000128309.16 TPM= 11.66 Transcript Type= NA
chr22	37019749	37029815	37019749	37029815	+	transcript1491.chr22.nnic@MPST	transcript1491.chr22.nnic	protein_coding	37019749,37024192,37026999,37029216	37019872,37024810,37027095,37029815	Gene ID= ENSG00000128309.16 TPM= 16.87 Transcript Type= NA
chr22	37019768	37029819	37019768	37029819	+	ENST00000341116.7@MPST	ENST00000341116.7	protein_coding	37019768,37023752,37024192,37029216	37019872,37023927,37024810,37029819	Gene ID= ENSG00000128309.16 TPM= 10.69 Transcript Type= protein_coding
chr22	37019772	37029796	37019772	37029796	+	ENST00000404393.5@MPST	ENST00000404393.5	protein_coding	37019772,37024192,37025002,37029216	37019774,37024810,37025127,37029796	Gene ID= ENSG00000128309.16 TPM= 4.9 Transcript Type= protein_coding
chr22	37019768	37029822	37019768	37029822	+	ENST00000429360.5@MPST	ENST00000429360.5	protein_coding	37019768,37024192,37029216	37019872,37024810,37029822	Gene ID= ENSG00000128309.16 TPM= 84.37 Transcript Type= protein_coding
chr22	37051736	37063389	37051736	37063389	+	ENST00000610767.4@KCTD17	ENST00000610767.4	protein_coding	37051736,37053100,37056320,37057398,37059313,37062525	37051949,37053208,37056411,37057493,37059438,37063389	Gene ID= ENSG00000100379.17 TPM= 5.79 Transcript Type= protein_coding
chr22	37225261	37244270	37225261	37244270	-	ENST00000249071.10@RAC2	ENST00000249071.10	protein_coding	37244114,37241587,37232801,37231932,37231231,37226671,37225261	37244270,37241658,37232918,37231994,37231390,37226803,37226039	Gene ID= ENSG00000128340.14 TPM= 6.76 Transcript Type= protein_coding
chr22	37469065	37486431	37469065	37486431	-	transcript1520.chr22.nic@MFNG	transcript1520.chr22.nic	protein_coding	37485923,37480721,37480197,37479345,37476896,37474512,37469065	37486431,37480769,37480299,37479498,37476981,37474677,37470029	Gene ID= ENSG00000100060.17 TPM= 2.41 Transcript Type= NA
chr22	37469065	37486401	37469065	37486401	-	ENST00000356998.7@MFNG	ENST00000356998.7	protein_coding	37485923,37480721,37480197,37479345,37476896,37474512,37472443,37469065	37486401,37480769,37480299,37479498,37476981,37474677,37472528,37470029	Gene ID= ENSG00000100060.17 TPM= 14 Transcript Type= protein_coding
chr22	37490362	37519542	37490362	37519542	-	ENST00000403299.5@CARD10	ENST00000403299.5	protein_coding	37519343,37518966,37517971,37515973,37510212,37508527,37507829,37506192,37504635,37504186,37503185,37502602,37497019,37496449,37495760,37495517,37494086,37492644,37492435,37491755,37490362	37519542,37519217,37518108,37516298,37510421,37508682,37507954,37506383,37504769,37504301,37503213,37502725,37497178,37496560,37496003,37495586,37494188,37492802,37492550,37491867,37491393	Gene ID= ENSG00000100065.14 TPM= 11.58 Transcript Type= protein_coding
chr22	37560447	37569405	37560447	37569405	+	ENST00000249014.4@CDC42EP1	ENST00000249014.4	protein_coding	37560447,37566072,37568108	37560588,37566812,37569405	Gene ID= ENSG00000128283.6 TPM= 3.86 Transcript Type= protein_coding
chr22	37608475	37633564	37608475	37633564	+	ENST00000343632.8@GGA1	ENST00000343632.8	protein_coding	37608475,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37624969,37625797,37629462,37629998,37630903,37631996,37632405,37632601	37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37625076,37625949,37629526,37630170,37631099,37632165,37632515,37633564	Gene ID= ENSG00000100083.18 TPM= 37.65 Transcript Type= protein_coding
chr22	37608845	37633564	37608845	37633564	+	ENST00000325180.12@GGA1	ENST00000325180.12	protein_coding	37608845,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37629462,37629998,37630903,37631996,37632405,37632601	37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37629526,37630170,37631099,37632165,37632515,37633564	Gene ID= ENSG00000100083.18 TPM= 25.1 Transcript Type= protein_coding
chr22	37608830	37618146	37608830	37618146	+	ENST00000489772.5@GGA1	ENST00000489772.5	protein_coding	37608830,37614190,37616922	37608903,37614274,37618146	Gene ID= ENSG00000100083.18 TPM= 1.93 Transcript Type= retained_intron
chr22	37658727	37666934	37658727	37666934	+	ENST00000215904.6@PDXP	ENST00000215904.6	protein_coding	37658727,37665555	37659356,37666934	Gene ID= ENSG00000241360.1 TPM= 41.51 Transcript Type= protein_coding
chr22	37675608	37679806	37675608	37679806	+	ENST00000215909.9@LGALS1	ENST00000215909.9	protein_coding	37675608,37676986,37678483,37679603	37675711,37677065,37678654,37679806	Gene ID= ENSG00000100097.11 TPM= 219.77 Transcript Type= protein_coding
chr22	37676125	37679802	37676125	37679802	+	ENST00000489315.5@LGALS1	ENST00000489315.5	protein_coding	37676125,37676986,37678483,37679603	37676188,37677065,37678654,37679802	Gene ID= ENSG00000100097.11 TPM= 13.2 Transcript Type= processed_transcript
chr22	37686323	37693476	37686323	37693476	+	ENST00000438329.5@NOL12	ENST00000438329.5	protein_coding	37686323,37687910,37688312,37688850,37690697,37691174,37693332	37686475,37688015,37688360,37688992,37690794,37691424,37693476	Gene ID= ENSG00000273899.4 TPM= 8.69 Transcript Type= nonsense_mediated_decay
chr22	37686323	37693478	37686323	37693478	+	ENST00000359114.8@NOL12	ENST00000359114.8	protein_coding	37686323,37687910,37688312,37688850,37690697,37691174	37686475,37688015,37688360,37688992,37690794,37693478	Gene ID= ENSG00000273899.4 TPM= 18.34 Transcript Type= protein_coding
chr22	37746216	37774140	37746216	37774140	+	transcript1547.chr22.nnic@TRIOBP	transcript1547.chr22.nnic	protein_coding	37746216,37751772,37754877,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601,37773783	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37772792,37774140	Gene ID= ENSG00000100106.19 TPM= 3.62 Transcript Type= NA
chr22	37746216	37774140	37746216	37774140	+	transcript1548.chr22.nnic@TRIOBP	transcript1548.chr22.nnic	protein_coding	37746216,37751772,37754916,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601,37773783	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37772764,37774140	Gene ID= ENSG00000100106.19 TPM= 18.82 Transcript Type= NA
chr22	37746268	37774140	37746268	37774140	+	transcript1551.chr22.nic@TRIOBP	transcript1551.chr22.nic	protein_coding	37746268,37751772,37754877,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37774140	Gene ID= ENSG00000100106.19 TPM= 4.34 Transcript Type= NA
chr22	37746233	37774140	37746233	37774140	+	ENST00000403663.6@TRIOBP	ENST00000403663.6	protein_coding	37746233,37751772,37754877,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601,37773783	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37772764,37774140	Gene ID= ENSG00000100106.19 TPM= 53.82 Transcript Type= protein_coding
chr22	37746228	37760346	37746228	37760346	+	ENST00000407319.6@TRIOBP	ENST00000407319.6	protein_coding	37746228,37751772,37754877,37755101,37755550,37757613,37759154,37759417	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37760346	Gene ID= ENSG00000100106.19 TPM= 4.34 Transcript Type= protein_coding
chr22	37774179	37774509	37774179	37774509	+	transcript1565.chr22.nnic@NA	transcript1565.chr22.nnic	NA	37774179	37774509	Gene ID= novel_gene_chr22_1566 TPM= 3.86 Transcript Type= NA
chr22	37805093	37807436	37805093	37807436	+	ENST00000340857.3@H1F0	ENST00000340857.3	protein_coding	37805093	37807436	Gene ID= ENSG00000189060.5 TPM= 111.01 Transcript Type= protein_coding
chr22	37807910	37816899	37807910	37816899	+	transcript1568.chr22.nic@GCAT	transcript1568.chr22.nic	protein_coding	37807910,37809949,37812887,37813463,37815126,37815418,37815663,37816200,37816567	37808163,37810157,37812988,37813609,37815280,37815500,37815834,37816321,37816899	Gene ID= ENSG00000100116.16 TPM= 8.21 Transcript Type= NA
chr22	37807912	37816899	37807912	37816899	+	ENST00000248924.10@GCAT	ENST00000248924.10	protein_coding	37807912,37810027,37812887,37813463,37815126,37815418,37815663,37816200,37816567	37808163,37810157,37812988,37813609,37815280,37815500,37815834,37816321,37816899	Gene ID= ENSG00000100116.16 TPM= 8.21 Transcript Type= protein_coding
chr22	37830855	37844431	37830855	37844431	-	ENST00000215941.8@ANKRD54	ENST00000215941.8	protein_coding	37843911,37840187,37838500,37833684,37833159,37832958,37832637,37830855	37844431,37840234,37838598,37833755,37833206,37833082,37832744,37832017	Gene ID= ENSG00000100124.14 TPM= 61.78 Transcript Type= protein_coding
chr22	37849372	37888782	37849372	37888782	+	ENST00000624234.3@EIF3L	ENST00000624234.3	protein_coding	37849372,37850015,37851280,37855565,37858679,37862969,37863272,37870176,37874370,37875841,37877674,37886765,37888426	37849482,37850063,37851490,37855644,37858740,37863038,37863345,37870347,37874524,37876011,37878171,37886845,37888782	Gene ID= ENSG00000100129.17 TPM= 500.35 Transcript Type= protein_coding
chr22	37953663	37969312	37953663	37969312	+	ENST00000442738.6@POLR2F	ENST00000442738.6	protein_coding	37953663,37956773,37959346,37967099,37967625	37953807,37956842,37959476,37967170,37969312	Gene ID= ENSG00000100142.14 TPM= 44.4 Transcript Type= protein_coding
chr22	37953711	37967560	37953711	37967560	+	ENST00000606538.5@POLR2F	ENST00000606538.5	protein_coding	37953711,37956773,37959346,37967099	37953807,37956842,37959476,37967560	Gene ID= ENSG00000100142.14 TPM= 2.9 Transcript Type= protein_coding
chr22	37953699	37967798	37953699	37967798	+	ENST00000483713.5@POLR2F	ENST00000483713.5	protein_coding	37953699,37956773,37959346,37967099,37967625	37953807,37956901,37959476,37967170,37967798	Gene ID= ENSG00000100142.14 TPM= 9.65 Transcript Type= nonsense_mediated_decay
chr22	38057374	38075701	38057374	38075701	+	transcript1603.chr22.nic@PICK1	transcript1603.chr22.nic	protein_coding	38057374,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864	38057436,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 13.27 Transcript Type= NA
chr22	38057200	38075701	38057200	38075701	+	ENST00000404072.7@PICK1	ENST00000404072.7	protein_coding	38057200,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864	38057489,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 9.41 Transcript Type= protein_coding
chr22	38068789	38075701	38068789	38075701	+	transcript1611.chr22.nnic@PICK1	transcript1611.chr22.nnic	protein_coding	38068789,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864	38068964,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 6.52 Transcript Type= NA
chr22	38067308	38075490	38067308	38075490	+	transcript1612.chr22.nnic@PICK1	transcript1612.chr22.nnic	protein_coding	38067308,38069033,38070838,38071682,38072477,38073000,38073773,38074864	38068407,38069122,38070891,38071744,38072610,38073092,38074451,38075490	Gene ID= ENSG00000100151.15 TPM= 3.86 Transcript Type= NA
chr22	38057407	38075701	38057407	38075701	+	ENST00000356976.7@PICK1	ENST00000356976.7	protein_coding	38057407,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864	38057587,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 21 Transcript Type= protein_coding
chr22	38111500	38181829	38111500	38181829	-	ENST00000402064.5@PLA2G6	ENST00000402064.5	protein_coding	38181784,38169218,38145438,38143105,38139982,38134988,38132831,38129454,38126371,38123095,38120759,38116075,38115527,38113487,38112504,38111500	38181829,38169471,38145653,38143288,38140169,38135084,38133013,38129562,38126449,38123258,38120909,38116211,38115681,38113654,38112577,38112305	Gene ID= ENSG00000184381.18 TPM= 3.86 Transcript Type= protein_coding
chr22	38201882	38216511	38201882	38216511	+	ENST00000338483.6@MAFF	ENST00000338483.6	protein_coding	38201882,38213823,38214420	38202212,38213889,38216511	Gene ID= ENSG00000185022.11 TPM= 220.09 Transcript Type= protein_coding
chr22	38219324	38273012	38219324	38273012	-	transcript1618.chr22.nic@TMEM184B	transcript1618.chr22.nic	protein_coding	38272884,38247770,38245935,38231244,38230669,38226779,38225424,38224785,38222642,38219324	38273012,38248019,38246100,38231334,38230744,38226870,38225593,38224979,38222662,38221710	Gene ID= ENSG00000198792.12 TPM= 17.06 Transcript Type= NA
chr22	38219291	38273034	38219291	38273034	-	ENST00000361906.7@TMEM184B	ENST00000361906.7	protein_coding	38272884,38247770,38245935,38231244,38230669,38226779,38225424,38224785,38219291	38273034,38248019,38246100,38231334,38230744,38226870,38225593,38224979,38221710	Gene ID= ENSG00000198792.12 TPM= 30.57 Transcript Type= protein_coding
chr22	38219312	38224103	38219312	38224103	-	ENST00000633056.1@TMEM184B	ENST00000633056.1	protein_coding	38219312	38224103	Gene ID= ENSG00000198792.12 TPM= 8.37 Transcript Type= retained_intron
chr22	38291918	38317039	38291918	38317039	-	transcript1635.chr22.nic@CSNK1E	transcript1635.chr22.nic	protein_coding	38316665,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293255,38291918	38317039,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319,38291938	Gene ID= ENSG00000213923.11 TPM= 1.93 Transcript Type= NA
chr22	38291918	38317401	38291918	38317401	-	transcript1638.chr22.nic@CSNK1E	transcript1638.chr22.nic	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38293255,38291918	38317401,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38291938	Gene ID= ENSG00000213923.11 TPM= 5.31 Transcript Type= NA
chr22	38297602	38317398	38297602	38317398	-	transcript1641.chr22.nic@CSNK1E	transcript1641.chr22.nic	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38298094,38297602	38317398,38314169,38303248,38303009,38300952,38300065,38298934,38298203,38297998	Gene ID= ENSG00000213923.11 TPM= 5.31 Transcript Type= NA
chr22	38290692	38317408	38290692	38317408	-	ENST00000396832.5@CSNK1E	ENST00000396832.5	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293255,38290692	38317408,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319,38291938	Gene ID= ENSG00000213923.11 TPM= 72.88 Transcript Type= protein_coding
chr22	38296205	38317411	38296205	38317411	-	ENST00000413574.6@CSNK1E	ENST00000413574.6	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38296205	38317411,38314169,38303248,38303009,38300952,38300065,38298934,38296686	Gene ID= ENSG00000213923.11 TPM= 2.41 Transcript Type= protein_coding
chr22	38297602	38300025	38297602	38300025	-	ENST00000442216.1@CSNK1E	ENST00000442216.1	protein_coding	38299895,38298786,38298094,38297602	38300025,38298934,38298203,38297998	Gene ID= ENSG00000213923.11 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr22	38483440	38506337	38483440	38506337	-	ENST00000396821.7@DDX17	ENST00000396821.7	protein_coding	38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38492056,38487873,38483440	38506337,38501280,38499499,38498573,38498150,38495937,38495046,38494802,38494131,38493771,38492115,38488115,38486440	Gene ID= ENSG00000100201.20 TPM= 50.84 Transcript Type= protein_coding
chr22	38491924	38506337	38491924	38506337	-	transcript1658.chr22.nic@DDX17	transcript1658.chr22.nic	protein_coding	38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38491924	38506337,38501280,38499499,38498573,38498150,38495937,38495046,38494802,38494131,38493771,38492115	Gene ID= ENSG00000100201.20 TPM= 9.82 Transcript Type= NA
chr22	38485681	38506294	38485681	38506294	-	ENST00000216019.11@DDX17	ENST00000216019.11	protein_coding	38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38487879,38485681	38506294,38501280,38499499,38498573,38498150,38495937,38495046,38494802,38494131,38493771,38492115,38486440	Gene ID= ENSG00000100201.20 TPM= 15.61 Transcript Type= retained_intron
chr22	38656636	38673850	38656636	38673850	+	transcript1670.chr22.nnic@CBY1	transcript1670.chr22.nnic	protein_coding	38656636,38668017,38670884,38673159	38656750,38668132,38670989,38673850	Gene ID= ENSG00000100211.10 TPM= 2.41 Transcript Type= NA
chr22	38656665	38673846	38656665	38673846	+	transcript1671.chr22.nnic@CBY1	transcript1671.chr22.nnic	protein_coding	38656665,38670884,38671070,38673159	38656750,38670989,38671188,38673846	Gene ID= ENSG00000100211.10 TPM= 3.38 Transcript Type= NA
chr22	38656655	38673854	38656655	38673854	+	ENST00000216029.7@CBY1	ENST00000216029.7	protein_coding	38656655,38668017,38670884,38671070,38673159	38656750,38668132,38670989,38671188,38673854	Gene ID= ENSG00000100211.10 TPM= 12.07 Transcript Type= protein_coding
chr22	38656651	38673846	38656651	38673846	+	ENST00000396811.6@CBY1	ENST00000396811.6	protein_coding	38656651,38665546,38668017,38670884,38671070,38673159	38656750,38665685,38668132,38670989,38671188,38673846	Gene ID= ENSG00000100211.10 TPM= 4.34 Transcript Type= protein_coding
chr22	38681948	38685421	38681948	38685421	+	ENST00000216034.5@TOMM22	ENST00000216034.5	protein_coding	38681948,38682323,38682879,38683767	38682095,38682441,38682996,38685421	Gene ID= ENSG00000100216.5 TPM= 3.86 Transcript Type= protein_coding
chr22	38685543	38700667	38685543	38700667	-	ENST00000216039.9@JOSD1	ENST00000216039.9	protein_coding	38699803,38689296,38688935,38685543	38700667,38689424,38689129,38688001	Gene ID= ENSG00000100221.10 TPM= 2.9 Transcript Type= protein_coding
chr22	38705723	38733587	38705723	38733587	+	ENST00000216044.9@GTPBP1	ENST00000216044.9	protein_coding	38705723,38708845,38715907,38716652,38721742,38724297,38726006,38726258,38727213,38727983,38729462,38730612	38706147,38708956,38716087,38717000,38721865,38724411,38726150,38726440,38727348,38728161,38729662,38733587	Gene ID= ENSG00000100226.15 TPM= 10.62 Transcript Type= protein_coding
chr22	38734736	38756043	38734736	38756043	-	transcript1683.chr22.nic@SUN2	transcript1683.chr22.nic	protein_coding	38755763,38754642,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734736	38756043,38754706,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 135.16 Transcript Type= NA
chr22	38734736	38756049	38734736	38756049	-	transcript1688.chr22.nic@SUN2	transcript1688.chr22.nic	protein_coding	38755763,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734736	38756049,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 227.83 Transcript Type= NA
chr22	38734736	38756049	38734736	38756049	-	transcript1695.chr22.nic@SUN2	transcript1695.chr22.nic	protein_coding	38755763,38752507,38751210,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734736	38756049,38752665,38751373,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 33.64 Transcript Type= NA
chr22	38734736	38739401	38734736	38739401	-	transcript1705.chr22.nnic@SUN2	transcript1705.chr22.nnic	protein_coding	38739338,38738873,38738587,38738173,38734736	38739401,38739053,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 155.99 Transcript Type= NA
chr22	38778508	38794173	38778508	38794173	-	ENST00000216068.8@DNAL4	ENST00000216068.8	protein_coding	38794068,38782663,38780926,38778508	38794173,38782870,38781009,38779613	Gene ID= ENSG00000100246.12 TPM= 3.86 Transcript Type= protein_coding
chr22	38861450	38872314	38861450	38872314	-	ENST00000407418.7@CBX6	ENST00000407418.7	protein_coding	38872122,38871902,38871692,38871480,38861450	38872314,38871945,38871757,38871546,38867201	Gene ID= ENSG00000183741.11 TPM= 6.76 Transcript Type= protein_coding
chr22	39077005	39087743	39077005	39087743	+	ENST00000407997.3@APOBEC3G	ENST00000407997.3	protein_coding	39077005,39078932,39080933,39081471,39083731,39086279,39087011,39087407	39077378,39079085,39081227,39081585,39083884,39086567,39087126,39087743	Gene ID= ENSG00000239713.8 TPM= 2.9 Transcript Type= protein_coding
chr22	39130777	39152733	39130777	39152733	-	transcript1722.chr22.nic@CBX7	transcript1722.chr22.nic	protein_coding	39152376,39149789,39141371,39138636,39134401,39130777	39152733,39149832,39141436,39138702,39134752,39134045	Gene ID= ENSG00000100307.12 TPM= 3.86 Transcript Type= NA
chr22	39130772	39152650	39130772	39152650	-	ENST00000216133.9@CBX7	ENST00000216133.9	protein_coding	39152376,39149789,39141371,39138636,39134401,39130772	39152650,39149832,39141436,39138702,39134752,39134048	Gene ID= ENSG00000100307.12 TPM= 49.23 Transcript Type= protein_coding
chr22	39312884	39319771	39312884	39319771	-	ENST00000216146.8@RPL3	ENST00000216146.8	protein_coding	39319595,39318400,39317461,39316706,39315369,39314686,39314107,39313634,39313191,39312884	39319771,39318592,39317629,39316841,39315555,39314846,39314208,39313729,39313310,39312984	Gene ID= ENSG00000100316.15 TPM= 620.05 Transcript Type= protein_coding
chr22	39349975	39377911	39349975	39377911	+	transcript1738.chr22.nnic@SYNGR1	transcript1738.chr22.nnic	protein_coding	39349975,39373528,39374316,39376052,39377598	39350109,39373644,39374553,39376197,39377911	Gene ID= ENSG00000100321.14 TPM= 2.9 Transcript Type= NA
chr22	39349974	39385574	39349974	39385574	+	transcript1741.chr22.nnic@SYNGR1	transcript1741.chr22.nnic	protein_coding	39349974,39374316,39376052,39381762	39350109,39374553,39376197,39385574	Gene ID= ENSG00000100321.14 TPM= 6.76 Transcript Type= NA
chr22	39349925	39378389	39349925	39378389	+	ENST00000318801.8@SYNGR1	ENST00000318801.8	protein_coding	39349925,39374316,39376052,39377598	39350109,39374553,39376197,39378389	Gene ID= ENSG00000100321.14 TPM= 11.58 Transcript Type= protein_coding
chr22	39349987	39377911	39349987	39377911	+	ENST00000415332.1@SYNGR1	ENST00000415332.1	protein_coding	39349987,39374316,39376052,39377598	39350109,39374660,39376197,39377911	Gene ID= ENSG00000100321.14 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr22	39376744	39378380	39376744	39378380	+	transcript1744.chr22.nnic@NA	transcript1744.chr22.nnic	NA	39376744	39378380	Gene ID= novel_gene_chr22_1745 TPM= 1.93 Transcript Type= NA
chr22	39399741	39431882	39399741	39431882	+	ENST00000216160.10@TAB1	ENST00000216160.10	protein_coding	39399741,39415006,39415500,39416791,39417711,39418732,39419519,39421827,39426703,39428021,39430015	39399835,39415142,39415653,39416877,39417849,39418845,39419630,39421971,39426925,39428183,39431882	Gene ID= ENSG00000100324.13 TPM= 20.27 Transcript Type= protein_coding
chr22	39433810	39435295	39433810	39435295	+	transcript1749.chr22.nnic@NA	transcript1749.chr22.nnic	NA	39433810	39435295	Gene ID= novel_gene_chr22_1750 TPM= 1.93 Transcript Type= NA
chr22	39502302	39516380	39502302	39516380	+	ENST00000433117.6@MIEF1	ENST00000433117.6	protein_coding	39502302,39504203,39511288,39511849,39512318,39513517	39502437,39504534,39511438,39512026,39512494,39516380	Gene ID= ENSG00000100335.13 TPM= 1.28 Transcript Type= nonsense_mediated_decay
chr22	39502353	39518132	39502353	39518132	+	ENST00000325301.6@MIEF1	ENST00000325301.6	protein_coding	39502353,39504203,39511288,39511849,39512232,39513517	39502437,39504534,39511438,39512026,39512494,39518132	Gene ID= ENSG00000100335.13 TPM= 4.18 Transcript Type= protein_coding
chr22	39502377	39516178	39502377	39516178	+	ENST00000404569.5@MIEF1	ENST00000404569.5	protein_coding	39502377,39504203,39509422,39511288,39511849,39512232,39513517	39502437,39504534,39509571,39511438,39512026,39512494,39516178	Gene ID= ENSG00000100335.13 TPM= 5.15 Transcript Type= protein_coding
chr22	39519695	39522683	39519695	39522683	+	ENST00000404241.6@ATF4	ENST00000404241.6	protein_coding	39519695,39520178,39521354,39521773	39519801,39520751,39521671,39522683	Gene ID= ENSG00000128272.14 TPM= 341.07 Transcript Type= protein_coding
chr22	39520564	39522685	39520564	39522685	+	ENST00000396680.2@ATF4	ENST00000396680.2	protein_coding	39520564,39521354,39521773	39520751,39521671,39522685	Gene ID= ENSG00000128272.14 TPM= 169.25 Transcript Type= protein_coding
chr22	39520564	39522683	39520564	39522683	+	ENST00000337304.2@ATF4	ENST00000337304.2	protein_coding	39520564,39521773	39521671,39522683	Gene ID= ENSG00000128272.14 TPM= 141.25 Transcript Type= protein_coding
chr22	39529093	39532855	39529093	39532855	-	ENST00000334678.7@RPS19BP1	ENST00000334678.7	protein_coding	39532687,39532395,39529820,39529093	39532855,39532523,39529917,39529623	Gene ID= ENSG00000187051.8 TPM= 67.57 Transcript Type= protein_coding
chr22	40044771	40246061	40044771	40246061	+	transcript1768.chr22.nic@TNRC6B	transcript1768.chr22.nic	protein_coding	40044771,40117055,40125772,40156115,40246015	40044998,40117128,40125862,40156182,40246061	Gene ID= ENSG00000100354.20 TPM= 1.93 Transcript Type= NA
chr22	40273344	40276619	40273344	40276619	-	transcript1770.chr22.nnic@NA	transcript1770.chr22.nnic	NA	40276531,40273344	40276619,40273569	Gene ID= novel_gene_chr22_1771 TPM= 2.9 Transcript Type= NA
chr22	40345601	40346455	40345601	40346455	-	transcript1830.chr22.nnic@NA	transcript1830.chr22.nnic	NA	40345601	40346455	Gene ID= novel_gene_chr22_1831 TPM= 1.93 Transcript Type= NA
chr22	40346503	40366996	40346503	40366996	+	ENST00000342312.9@ADSL	ENST00000342312.9	protein_coding	40346503,40349832,40353073,40354248,40358864,40359260,40360402,40361273,40361488,40362981,40364276,40366436	40346711,40350035,40353117,40354327,40359035,40359306,40360492,40361342,40361635,40363071,40364365,40366996	Gene ID= ENSG00000239900.12 TPM= 7.08 Transcript Type= protein_coding
chr22	40346514	40387476	40346514	40387476	+	ENST00000636714.1@ADSL	ENST00000636714.1	protein_coding	40346514,40349832,40353073,40354248,40358864,40359260,40360402,40361273,40361488,40362981,40364276,40364880,40366436,40387219	40346711,40350035,40353117,40354327,40359035,40359306,40360492,40361342,40361635,40363071,40364365,40365056,40366498,40387476	Gene ID= ENSG00000239900.12 TPM= 2.25 Transcript Type= protein_coding
chr22	40370611	40410289	40370611	40410289	+	ENST00000248929.13@SGSM3	ENST00000248929.13	protein_coding	40370611,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40409682	40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410289	Gene ID= ENSG00000100359.20 TPM= 2.9 Transcript Type= protein_coding
chr22	40429351	40636718	40429351	40636718	-	transcript1825.chr22.nic@MKL1	transcript1825.chr22.nic	protein_coding	40636478,40552106,40463221,40435499,40431405,40429351	40636718,40552367,40463286,40435554,40431480,40429767	Gene ID= ENSG00000196588.14 TPM= 2.9 Transcript Type= NA
chr22	40824535	40857022	40824535	40857022	-	ENST00000216218.7@ST13	ENST00000216218.7	protein_coding	40856431,40850823,40848294,40844839,40840626,40835803,40835560,40832569,40830840,40829626,40827096,40824535	40857022,40850880,40848369,40844909,40840692,40835887,40835670,40832671,40830956,40829674,40827229,40826666	Gene ID= ENSG00000100380.13 TPM= 72.4 Transcript Type= protein_coding
chr22	40857097	40862770	40857097	40862770	+	ENST00000482652.1@XPNPEP3	ENST00000482652.1	protein_coding	40857097,40860678,40861618	40857245,40860793,40862770	Gene ID= ENSG00000196236.12 TPM= 1.93 Transcript Type= processed_transcript
chr22	40857082	40858025	40857082	40858025	+	transcript1864.chr22.nnic@NA	transcript1864.chr22.nnic	NA	40857082	40858025	Gene ID= novel_gene_chr22_1865 TPM= 14.48 Transcript Type= NA
chr22	40951376	40972662	40951376	40972662	+	transcript1871.chr22.nnic@RBX1	transcript1871.chr22.nnic	protein_coding	40951376,40964047,40967799,40972476	40951476,40964117,40967884,40972662	Gene ID= ENSG00000100387.8 TPM= 34.75 Transcript Type= NA
chr22	41205205	41231271	41205205	41231271	+	ENST00000216237.9@L3MBTL2	ENST00000216237.9	protein_coding	41205205,41209696,41213893,41216139,41217123,41219419,41220734,41221199,41224020,41224725,41224967,41225794,41226662,41227089,41227804,41229540,41230139	41205386,41209933,41214026,41216262,41217202,41219536,41220868,41221287,41224251,41224801,41225071,41225941,41226744,41227323,41227869,41229656,41231271	Gene ID= ENSG00000100395.14 TPM= 20.27 Transcript Type= protein_coding
chr22	41229513	41240934	41229513	41240934	-	ENST00000216241.13@CHADL	ENST00000216241.13	protein_coding	41240874,41239443,41237176,41236484,41235145,41229513	41240934,41239620,41238885,41236650,41235343,41229730	Gene ID= ENSG00000100399.15 TPM= 2.9 Transcript Type= protein_coding
chr22	41245611	41286187	41245611	41286187	-	transcript1886.chr22.nnic@RANGAP1	transcript1886.chr22.nnic	protein_coding	41285986,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254584,41254308,41252872,41251007,41249729,41249330,41245611	41286187,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254666,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 5.31 Transcript Type= NA
chr22	41245611	41286219	41245611	41286219	-	transcript1892.chr22.nnic@RANGAP1	transcript1892.chr22.nnic	protein_coding	41285544,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41286219,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 12.07 Transcript Type= NA
chr22	41245611	41286251	41245611	41286251	-	ENST00000356244.7@RANGAP1	ENST00000356244.7	protein_coding	41285986,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41286251,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 55.51 Transcript Type= protein_coding
chr22	41245611	41286219	41245611	41286219	-	transcript1894.chr22.nnic@RANGAP1	transcript1894.chr22.nnic	protein_coding	41286086,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41286219,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 7.24 Transcript Type= NA
chr22	41301522	41360147	41301522	41360147	+	ENST00000352645.4@ZC3H7B	ENST00000352645.4	protein_coding	41301522,41320655,41325564,41325721,41327206,41330023,41332171,41338313,41339001,41339816,41341088,41342529,41343415,41346003,41348067,41349120,41351561,41355469,41355757,41355954,41356343,41356645,41357177	41301772,41320713,41325597,41325918,41327364,41330103,41332227,41338355,41339191,41340137,41341146,41342628,41343576,41346208,41348167,41349301,41351646,41355602,41355862,41356062,41356476,41356808,41360147	Gene ID= ENSG00000100403.11 TPM= 10.62 Transcript Type= protein_coding
chr22	41381929	41399326	41381929	41399326	+	ENST00000266304.8@TEF	ENST00000266304.8	protein_coding	41381929,41387351,41394096,41395745	41382201,41387668,41394316,41399326	Gene ID= ENSG00000167074.14 TPM= 55.99 Transcript Type= protein_coding
chr22	41433929	41436819	41433929	41436819	-	transcript1913.chr22.nnic@NA	transcript1913.chr22.nnic	NA	41433929	41436819	Gene ID= novel_gene_chr22_1914 TPM= 51.16 Transcript Type= NA
chr22	41436380	41437974	41436380	41437974	+	transcript1909.chr22.nnic@NA	transcript1909.chr22.nnic	NA	41436380	41437974	Gene ID= novel_gene_chr22_1910 TPM= 4.83 Transcript Type= NA
chr22	41440286	41443329	41440286	41443329	-	transcript1919.chr22.nnic@NA	transcript1919.chr22.nnic	NA	41440286	41443329	Gene ID= novel_gene_chr22_1920 TPM= 2.9 Transcript Type= NA
chr22	41445987	41447794	41445987	41447794	-	transcript1911.chr22.nnic@NA	transcript1911.chr22.nnic	NA	41445987	41447794	Gene ID= novel_gene_chr22_1912 TPM= 10.62 Transcript Type= NA
chr22	41459717	41468725	41459717	41468725	-	ENST00000216252.3@PHF5A	ENST00000216252.3	protein_coding	41468602,41468124,41467448,41459717	41468725,41468147,41467614,41460487	Gene ID= ENSG00000100410.7 TPM= 17.38 Transcript Type= protein_coding
chr22	41469125	41528989	41469125	41528989	+	ENST00000216254.8@ACO2	ENST00000216254.8	protein_coding	41469125,41499726,41507791,41511876,41515377,41515767,41517527,41518481,41520171,41522830,41523205,41523830,41524846,41525193,41526262,41527288,41527901,41528479	41469182,41499862,41508049,41511968,41515535,41515917,41517631,41518572,41520276,41522987,41523278,41523941,41524968,41525348,41526453,41527420,41528022,41528989	Gene ID= ENSG00000100412.15 TPM= 406.71 Transcript Type= protein_coding
chr22	41525804	41544489	41525804	41544489	-	ENST00000396504.6@POLR3H	ENST00000396504.6	protein_coding	41544428,41543991,41540699,41532659,41532094,41530687,41525804	41544489,41544121,41540795,41532745,41532157,41530888,41529336	Gene ID= ENSG00000100413.16 TPM= 10.14 Transcript Type= protein_coding
chr22	41525826	41544445	41525826	41544445	-	ENST00000355209.8@POLR3H	ENST00000355209.8	protein_coding	41543991,41540699,41532659,41532094,41530687,41525826	41544445,41540795,41532745,41532157,41530888,41529336	Gene ID= ENSG00000100413.16 TPM= 11.1 Transcript Type= protein_coding
chr22	41528843	41544455	41528843	41544455	-	ENST00000431534.5@POLR3H	ENST00000431534.5	protein_coding	41543991,41540699,41532604,41532094,41530687,41528843	41544455,41540795,41532745,41532157,41530888,41529336	Gene ID= ENSG00000100413.16 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr22	41530678	41533859	41530678	41533859	+	transcript1956.chr22.nnic@NA	transcript1956.chr22.nnic	NA	41530678	41533859	Gene ID= novel_gene_chr22_1957 TPM= 4.83 Transcript Type= NA
chr22	41560763	41576666	41560763	41576666	+	ENST00000306149.11@CSDC2	ENST00000306149.11	protein_coding	41560763,41571843,41573655,41574733	41561183,41572141,41573777,41576666	Gene ID= ENSG00000172346.14 TPM= 2.9 Transcript Type= protein_coding
chr22	41576894	41589890	41576894	41589890	-	ENST00000216259.7@PMM1	ENST00000216259.7	protein_coding	41589719,41586076,41584527,41584281,41583959,41578806,41577808,41576894	41589890,41586193,41584603,41584372,41584058,41578881,41577923,41577440	Gene ID= ENSG00000100417.11 TPM= 10.62 Transcript Type= protein_coding
chr22	41598028	41621096	41598028	41621096	-	ENST00000263256.6@DESI1	ENST00000263256.6	protein_coding	41620752,41607840,41607262,41604044,41603259,41598028	41621096,41607861,41607331,41604153,41603381,41601190	Gene ID= ENSG00000100418.7 TPM= 22.2 Transcript Type= protein_coding
chr22	41621119	41664039	41621119	41664039	+	ENST00000360079.7@XRCC6	ENST00000360079.7	protein_coding	41621119,41621990,41628118,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622	41621345,41622086,41628230,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664039	Gene ID= ENSG00000196419.12 TPM= 467.69 Transcript Type= protein_coding
chr22	41621163	41664048	41621163	41664048	+	ENST00000428575.6@XRCC6	ENST00000428575.6	protein_coding	41621163,41621990,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622	41621345,41622086,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664048	Gene ID= ENSG00000196419.12 TPM= 7.72 Transcript Type= protein_coding
chr22	41673967	41688881	41673967	41688881	-	ENST00000401959.5@SNU13	ENST00000401959.5	protein_coding	41688794,41682356,41680244,41673967	41688881,41682587,41680364,41675195	Gene ID= ENSG00000100138.13 TPM= 1.93 Transcript Type= protein_coding
chr22	41687742	41688847	41687742	41688847	-	ENST00000469522.1@SNU13	ENST00000469522.1	protein_coding	41688794,41687742	41688847,41688327	Gene ID= ENSG00000100138.13 TPM= 1.93 Transcript Type= retained_intron
chr22	41673930	41688909	41673930	41688909	-	ENST00000355257.7@SNU13	ENST00000355257.7	protein_coding	41688794,41680244,41673930	41688909,41680364,41675195	Gene ID= ENSG00000100138.13 TPM= 79.16 Transcript Type= protein_coding
chr22	41800679	41826299	41800679	41826299	+	ENST00000255784.5@CCDC134	ENST00000255784.5	protein_coding	41800679,41808875,41809879,41810207,41813264,41813751,41825698	41800766,41808993,41810000,41810291,41813445,41813822,41826299	Gene ID= ENSG00000100147.13 TPM= 1.93 Transcript Type= protein_coding
chr22	41833105	41907308	41833105	41907308	+	ENST00000361204.8@SREBF2	ENST00000361204.8	protein_coding	41833105,41866831,41868611,41870889,41873798,41875337,41875543,41877229,41877942,41880716,41884842,41893117,41894820,41897052,41898649,41900330,41902970,41904863,41905440	41833358,41867280,41868792,41871035,41874019,41875451,41875724,41877421,41878123,41880992,41885011,41893285,41894937,41897161,41898781,41900498,41903155,41904974,41907308	Gene ID= ENSG00000198911.11 TPM= 71.43 Transcript Type= protein_coding
chr22	42058354	42070830	42058354	42070830	-	ENST00000396398.7@NAGA	ENST00000396398.7	protein_coding	42070282,42068439,42067765,42067113,42066710,42065738,42062827,42060924,42058354	42070830,42068574,42067936,42067290,42066804,42065899,42063024,42061067,42060413	Gene ID= ENSG00000198951.11 TPM= 3.86 Transcript Type= protein_coding
chr22	42059802	42070842	42059802	42070842	-	ENST00000402937.1@NAGA	ENST00000402937.1	protein_coding	42070763,42070282,42068439,42067765,42067113,42066710,42065738,42062827,42060924,42059802	42070842,42070373,42068574,42067936,42067290,42066804,42065899,42063024,42061067,42060413	Gene ID= ENSG00000198951.11 TPM= 1.93 Transcript Type= protein_coding
chr22	42074251	42079441	42074251	42079441	+	ENST00000321753.7@FAM109B	ENST00000321753.7	protein_coding	42074251,42075571,42077280	42074341,42075652,42079441	Gene ID= ENSG00000177096.8 TPM= 6.76 Transcript Type= protein_coding
chr22	42079691	42083353	42079691	42083353	+	ENST00000422252.1@SMDT1	ENST00000422252.1	protein_coding	42079691,42081925,42083119	42079905,42082065,42083353	Gene ID= ENSG00000183172.8 TPM= 26.06 Transcript Type= nonsense_mediated_decay
chr22	42079695	42084284	42079695	42084284	+	ENST00000331479.3@SMDT1	ENST00000331479.3	protein_coding	42079695,42081925,42083119	42079954,42082065,42084284	Gene ID= ENSG00000183172.8 TPM= 13.51 Transcript Type= protein_coding
chr22	42085525	42090955	42085525	42090955	-	ENST00000498737.6@NDUFA6	ENST00000498737.6	protein_coding	42090606,42087060,42085525	42090955,42087175,42086314	Gene ID= ENSG00000184983.9 TPM= 168.13 Transcript Type= protein_coding
chr22	42509968	42519802	42509968	42519802	-	ENST00000323013.6@RRP7A	ENST00000323013.6	protein_coding	42519714,42518005,42516011,42515151,42514682,42514106,42509968	42519802,42518147,42516136,42515268,42514779,42514304,42512995	Gene ID= ENSG00000189306.10 TPM= 2.9 Transcript Type= protein_coding
chr22	42583721	42614959	42583721	42614959	-	transcript2051.chr22.nic@POLDIP3	transcript2051.chr22.nic	protein_coding	42614799,42602770,42601970,42599698,42597673,42596186,42595537,42591955,42587506,42583721	42614959,42603160,42602056,42599793,42597737,42596365,42595614,42592084,42587572,42585968	Gene ID= ENSG00000100227.17 TPM= 11.1 Transcript Type= NA
chr22	42583721	42614962	42583721	42614962	-	ENST00000252115.9@POLDIP3	ENST00000252115.9	protein_coding	42614799,42602770,42601970,42599698,42596186,42595537,42591955,42587506,42583721	42614962,42603160,42602056,42599793,42596365,42595614,42592084,42587572,42585968	Gene ID= ENSG00000100227.17 TPM= 73.36 Transcript Type= protein_coding
chr22	42598250	42614959	42598250	42614959	-	transcript2062.chr22.nic@POLDIP3	transcript2062.chr22.nic	protein_coding	42614799,42602770,42601970,42598250	42614959,42603160,42602056,42599793	Gene ID= ENSG00000100227.17 TPM= 3.14 Transcript Type= NA
chr22	42583721	42614931	42583721	42614931	-	ENST00000348657.6@POLDIP3	ENST00000348657.6	protein_coding	42614799,42602770,42599698,42596186,42595537,42591955,42587506,42583721	42614931,42603160,42599793,42596365,42595614,42592084,42587572,42585968	Gene ID= ENSG00000100227.17 TPM= 11.1 Transcript Type= protein_coding
chr22	42618808	42649568	42618808	42649568	-	ENST00000352397.9@CYB5R3	ENST00000352397.9	protein_coding	42649295,42636715,42631378,42630882,42628152,42627605,42627304,42623789,42618808	42649568,42636846,42631450,42630988,42628281,42627688,42627389,42623888,42619945	Gene ID= ENSG00000100243.20 TPM= 517.65 Transcript Type= protein_coding
chr22	42692121	42720898	42692121	42720898	-	transcript2088.chr22.nnic@A4GALT	transcript2088.chr22.nnic	protein_coding	42720797,42695491,42692121	42720898,42695631,42693997	Gene ID= ENSG00000128274.15 TPM= 21.96 Transcript Type= NA
chr22	42692122	42720898	42692122	42720898	-	transcript2089.chr22.nnic@A4GALT	transcript2089.chr22.nnic	protein_coding	42720797,42695575,42692122	42720898,42695631,42693997	Gene ID= ENSG00000128274.15 TPM= 14.72 Transcript Type= NA
chr22	42692121	42720898	42692121	42720898	-	transcript2091.chr22.nnic@A4GALT	transcript2091.chr22.nnic	protein_coding	42720797,42692121	42720898,42695631	Gene ID= ENSG00000128274.15 TPM= 2.9 Transcript Type= NA
chr22	42692122	42695633	42692122	42695633	-	ENST00000381278.3@A4GALT	ENST00000381278.3	protein_coding	42695575,42692122	42695633,42693997	Gene ID= ENSG00000128274.15 TPM= 11.83 Transcript Type= protein_coding
chr22	42692121	42695633	42692121	42695633	-	ENST00000249005.2@A4GALT	ENST00000249005.2	protein_coding	42695491,42692121	42695633,42693997	Gene ID= ENSG00000128274.15 TPM= 14.24 Transcript Type= protein_coding
chr22	42787415	42793065	42787415	42793065	-	transcript2092.chr22.nnic@AL049757.1	transcript2092.chr22.nnic	processed_pseudogene	42791810,42787415	42793065,42787993	Gene ID= ENSG00000274717.1 TPM= 1.93 Transcript Type= NA
chr22	42796502	42857402	42796502	42857402	-	ENST00000263245.9@ARFGAP3	ENST00000263245.9	protein_coding	42857114,42847514,42840944,42835362,42834242,42831549,42826940,42823656,42822270,42817729,42817142,42810813,42808767,42807073,42799039,42796502	42857402,42847632,42841016,42835493,42834325,42831636,42826999,42823702,42822409,42817857,42817264,42810944,42808890,42807163,42799160,42797605	Gene ID= ENSG00000242247.10 TPM= 70.95 Transcript Type= protein_coding
chr22	42796502	42857304	42796502	42857304	-	transcript2100.chr22.nic@ARFGAP3	transcript2100.chr22.nic	protein_coding	42857114,42847514,42840944,42835362,42834242,42831549,42826940,42823656,42822270,42817729,42817142,42808767,42807073,42799039,42796502	42857304,42847632,42841016,42835493,42834325,42831636,42826999,42823702,42822409,42817857,42817264,42808890,42807163,42799160,42797605	Gene ID= ENSG00000242247.10 TPM= 11.1 Transcript Type= NA
chr22	42869771	43015173	42869771	43015173	-	transcript2116.chr22.nnic@PACSIN2	transcript2116.chr22.nnic	protein_coding	43015021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869771	43015173,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 6.92 Transcript Type= NA
chr22	42869771	43015175	42869771	43015175	-	transcript2118.chr22.nic@PACSIN2	transcript2118.chr22.nic	protein_coding	43015021,42912021,42893457,42890947,42888643,42884386,42882184,42879048,42876137,42869771	43015175,42912157,42893613,42891182,42888798,42884561,42882304,42879169,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 27.83 Transcript Type= NA
chr22	42869771	42882424	42869771	42882424	-	transcript2121.chr22.nic@PACSIN2	transcript2121.chr22.nic	protein_coding	42882184,42879048,42876888,42876137,42869771	42882424,42879169,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 10.78 Transcript Type= NA
chr22	42869771	42882424	42869771	42882424	-	transcript2122.chr22.nic@PACSIN2	transcript2122.chr22.nic	protein_coding	42882184,42879048,42876137,42869771	42882424,42879169,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 10.45 Transcript Type= NA
chr22	42869771	43015145	42869771	43015145	-	ENST00000263246.7@PACSIN2	ENST00000263246.7	protein_coding	43015021,42912021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869771	43015145,42912157,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 56.15 Transcript Type= protein_coding
chr22	43039644	43089428	43039644	43089428	-	ENST00000266254.11@TTLL1	ENST00000266254.11	protein_coding	43089277,43079902,43075474,43069636,43068410,43064190,43063813,43059384,43051801,43046410,43039644	43089428,43079986,43075590,43069844,43068590,43064324,43063921,43059527,43051887,43046573,43039905	Gene ID= ENSG00000100271.16 TPM= 1.93 Transcript Type= protein_coding
chr22	43132880	43143364	43132880	43143364	-	ENST00000327555.5@MCAT	ENST00000327555.5	protein_coding	43142926,43141162,43132880	43143364,43141249,43133486	Gene ID= ENSG00000100294.12 TPM= 14.48 Transcript Type= protein_coding
chr22	43151514	43163242	43151514	43163242	+	ENST00000337554.7@TSPO	ENST00000337554.7	protein_coding	43151514,43159210,43161052,43162803	43151604,43159420,43161190,43163242	Gene ID= ENSG00000100300.17 TPM= 99.91 Transcript Type= protein_coding
chr22	43151547	43163241	43151547	43163241	+	ENST00000583777.5@TSPO	ENST00000583777.5	protein_coding	43151547,43161052,43162803	43151604,43161190,43163241	Gene ID= ENSG00000100300.17 TPM= 8.21 Transcript Type= protein_coding
chr22	43166622	43187133	43166622	43187133	-	ENST00000216129.6@TTLL12	ENST00000216129.6	protein_coding	43186893,43182980,43180742,43179841,43179619,43176320,43174499,43174209,43173715,43172403,43171819,43169500,43168774,43166622	43187133,43183149,43180940,43180000,43179752,43176396,43174615,43174403,43173826,43172554,43171900,43169568,43168912,43168159	Gene ID= ENSG00000100304.12 TPM= 31.86 Transcript Type= protein_coding
chr22	43955473	43996529	43955473	43996529	+	transcript2146.chr22.nic@SAMM50	transcript2146.chr22.nic	protein_coding	43955473,43963286,43964452,43968731,43972236,43972871,43976055,43976750,43977872,43981391,43983933,43989111,43990265,43996338	43955598,43963396,43964553,43968818,43972342,43973323,43976183,43976821,43977958,43981461,43984000,43989257,43990406,43996529	Gene ID= ENSG00000100347.14 TPM= 40.06 Transcript Type= NA
chr22	43955421	43996533	43955421	43996533	+	ENST00000350028.4@SAMM50	ENST00000350028.4	protein_coding	43955421,43963286,43964452,43968731,43972236,43972871,43973236,43976055,43976750,43977872,43981391,43983933,43989111,43990265,43996338	43955598,43963396,43964553,43968818,43972342,43973001,43973323,43976183,43976821,43977958,43981461,43984000,43989257,43990406,43996533	Gene ID= ENSG00000100347.14 TPM= 217.68 Transcript Type= protein_coding
chr22	44024038	44168923	44024038	44168923	+	transcript2151.chr22.nnic@PARVB	transcript2151.chr22.nnic	protein_coding	44024038,44024322,44093928,44100053,44119038,44131487,44132894,44136460,44140124,44147861,44151483,44157982,44163858,44168602	44024083,44024451,44094017,44100123,44119140,44131627,44133009,44136518,44140143,44147922,44151551,44158083,44163930,44168923	Gene ID= ENSG00000188677.14 TPM= 7.96 Transcript Type= NA
chr22	44024249	44168923	44024249	44168923	+	transcript2152.chr22.nnic@PARVB	transcript2152.chr22.nnic	protein_coding	44024249,44039836,44093928,44100053,44119038,44131487,44132894,44136460,44140124,44147861,44151483,44157982,44163858,44168602	44024451,44039957,44094017,44100123,44119140,44131627,44133009,44136518,44140143,44147922,44151551,44158083,44163930,44168923	Gene ID= ENSG00000188677.14 TPM= 7 Transcript Type= NA
chr22	44024288	44168922	44024288	44168922	+	transcript2155.chr22.nnic@PARVB	transcript2155.chr22.nnic	protein_coding	44024288,44093928,44100053,44119038,44131487,44132894,44136460,44140124,44147861,44151483,44157982,44163858,44168388	44024451,44094017,44100123,44119140,44131627,44133009,44136518,44140143,44147922,44151551,44158083,44163930,44168922	Gene ID= ENSG00000188677.14 TPM= 6.03 Transcript Type= NA
chr22	44024139	44168923	44024139	44168923	+	transcript2164.chr22.nnic@PARVB	transcript2164.chr22.nnic	protein_coding	44024139,44093928,44100053,44131487,44132894,44136460,44140124,44147861,44151483,44157982,44163858,44168602	44024451,44094017,44100123,44131627,44133009,44136518,44140143,44147922,44151551,44158083,44163930,44168923	Gene ID= ENSG00000188677.14 TPM= 5.79 Transcript Type= NA
chr22	44024277	44172949	44024277	44172949	+	ENST00000338758.11@PARVB	ENST00000338758.11	protein_coding	44024277,44093928,44100053,44119038,44131487,44132894,44136460,44140124,44147861,44151483,44157982,44163858,44168602	44024451,44094017,44100123,44119140,44131627,44133009,44136518,44140143,44147922,44151551,44158083,44163930,44172949	Gene ID= ENSG00000188677.14 TPM= 70.71 Transcript Type= protein_coding
chr22	44492572	44498298	44492572	44498298	-	ENST00000341255.3@RTL6	ENST00000341255.3	protein_coding	44498044,44492572	44498298,44497811	Gene ID= ENSG00000188636.3 TPM= 67.57 Transcript Type= protein_coding
chr22	45163985	45188015	45163985	45188015	+	transcript2184.chr22.nic@NUP50	transcript2184.chr22.nic	protein_coding	45163985,45168168,45170988,45171600,45175894,45178238,45181286,45183402,45184453	45164296,45168246,45171177,45171683,45176080,45178900,45181367,45183520,45188015	Gene ID= ENSG00000093000.18 TPM= 3.38 Transcript Type= NA
chr22	45163841	45188015	45163841	45188015	+	ENST00000347635.8@NUP50	ENST00000347635.8	protein_coding	45163841,45168168,45171600,45175894,45178238,45181286,45183402,45184453	45164296,45168246,45171683,45176080,45178900,45181367,45183520,45188015	Gene ID= ENSG00000093000.18 TPM= 13.03 Transcript Type= protein_coding
chr22	45195828	45212488	45195828	45212488	-	ENST00000251993.11@KIAA0930	ENST00000251993.11	protein_coding	45212265,45211956,45205793,45205630,45205217,45203845,45202990,45199873,45197790,45195828	45212488,45212107,45205912,45205707,45205318,45203985,45203184,45200035,45197948,45197216	Gene ID= ENSG00000100364.18 TPM= 8.04 Transcript Type= protein_coding
chr22	45196038	45212457	45196038	45212457	-	ENST00000488038.5@KIAA0930	ENST00000488038.5	protein_coding	45211956,45205793,45205630,45205217,45203845,45202990,45199873,45197790,45196038	45212457,45205912,45205707,45205318,45203985,45203184,45200035,45197948,45197216	Gene ID= ENSG00000100364.18 TPM= 13.51 Transcript Type= retained_intron
chr22	45309937	45341955	45309937	45341955	+	transcript2212.chr22.nnic@FAM118A	transcript2212.chr22.nnic	protein_coding	45309937,45321602,45322042,45322371,45323175,45327842,45330603,45332425,45335350,45336328,45340386	45310183,45321793,45322215,45322426,45323427,45328063,45330731,45332710,45335382,45336411,45341955	Gene ID= ENSG00000100376.11 TPM= 2.12 Transcript Type= NA
chr22	45309904	45341955	45309904	45341955	+	transcript2217.chr22.nnic@FAM118A	transcript2217.chr22.nnic	protein_coding	45309904,45322042,45322371,45323175,45327842,45330603,45332425,45335350,45336328,45340386	45310183,45322215,45322426,45323427,45328063,45330731,45332710,45335382,45336411,45341955	Gene ID= ENSG00000100376.11 TPM= 2.12 Transcript Type= NA
chr22	45309911	45341955	45309911	45341955	+	transcript2223.chr22.nnic@FAM118A	transcript2223.chr22.nnic	protein_coding	45309911,45322371,45323175,45330603,45332425,45335350,45336328,45340386	45310183,45322426,45323427,45330731,45332710,45335382,45336411,45341955	Gene ID= ENSG00000100376.11 TPM= 4.05 Transcript Type= NA
chr22	45309939	45341955	45309939	45341955	+	transcript2225.chr22.nnic@FAM118A	transcript2225.chr22.nnic	protein_coding	45309939,45322371,45323175,45332425,45335350,45336328,45340386	45310183,45322426,45323427,45332710,45335382,45336411,45341955	Gene ID= ENSG00000100376.11 TPM= 2.12 Transcript Type= NA
chr22	45309828	45341955	45309828	45341955	+	transcript2227.chr22.nnic@FAM118A	transcript2227.chr22.nnic	protein_coding	45309828,45322371,45323175,45335350,45336328,45340386	45310183,45322426,45323427,45335382,45336411,45341955	Gene ID= ENSG00000100376.11 TPM= 2.12 Transcript Type= NA
chr22	45309981	45328800	45309981	45328800	+	transcript2229.chr22.nnic@FAM118A	transcript2229.chr22.nnic	protein_coding	45309981,45322371,45323175,45328004	45310183,45322426,45323389,45328800	Gene ID= ENSG00000100376.11 TPM= 1.93 Transcript Type= NA
chr22	45502883	45563362	45502883	45563362	+	ENST00000262722.11@FBLN1	ENST00000262722.11	protein_coding	45502883,45518682,45525543,45527847,45531265,45533063,45533761,45535200,45541229,45542155,45543401,45547085,45548613,45550492,45562912	45503064,45518787,45525678,45528009,45531324,45533164,45533898,45535337,45541372,45542283,45543526,45547204,45548744,45550615,45563362	Gene ID= ENSG00000077942.18 TPM= 14.96 Transcript Type= protein_coding
chr22	45502891	45601135	45502891	45601135	+	ENST00000327858.10@FBLN1	ENST00000327858.10	protein_coding	45502891,45518682,45525543,45527847,45531265,45533063,45533761,45535200,45541229,45542155,45543401,45547085,45548613,45550492,45574511,45576977,45600307	45503064,45518787,45525678,45528009,45531324,45533164,45533898,45535337,45541372,45542283,45543526,45547204,45548744,45550615,45574653,45577108,45601135	Gene ID= ENSG00000077942.18 TPM= 25.58 Transcript Type= protein_coding
chr22	45671799	45845307	45671799	45845307	+	ENST00000252934.9@ATXN10	ENST00000252934.9	protein_coding	45671799,45689712,45692996,45700282,45702689,45718413,45729425,45738731,45740369,45806959,45842991,45843669	45672179,45689903,45693078,45700378,45702847,45718493,45729590,45738839,45740538,45807022,45843178,45845307	Gene ID= ENSG00000130638.16 TPM= 116.32 Transcript Type= protein_coding
chr22	45671798	45845304	45671798	45845304	+	ENST00000381061.8@ATXN10	ENST00000381061.8	protein_coding	45671798,45692996,45700282,45702689,45718413,45729425,45738731,45740369,45806959,45842991,45843669	45672179,45693078,45700378,45702847,45718493,45729590,45738839,45740538,45807022,45843178,45845304	Gene ID= ENSG00000130638.16 TPM= 4.34 Transcript Type= protein_coding
chr22	45672614	45672959	45672614	45672959	+	transcript2251.chr22.nnic@NA	transcript2251.chr22.nnic	NA	45672614	45672959	Gene ID= novel_gene_chr22_2252 TPM= 1.93 Transcript Type= NA
chr22	46013606	46015498	46013606	46015498	+	ENST00000608290.1@BX537318.1	ENST00000608290.1	lincRNA	46013606,46014497	46013810,46015498	Gene ID= ENSG00000273145.1 TPM= 1.93 Transcript Type= lincRNA
chr22	46053705	46057210	46053705	46057210	+	ENST00000416202.5@PRR34-AS1	ENST00000416202.5	antisense_RNA	46053705,46056847,46057062	46053920,46056945,46057210	Gene ID= ENSG00000241990.5 TPM= 84.95 Transcript Type= antisense_RNA
chr22	46107305	46111666	46107305	46111666	+	transcript2267.chr22.nic@MIRLET7BHG	transcript2267.chr22.nic	lincRNA	46107305,46109764	46109353,46111666	Gene ID= ENSG00000197182.14 TPM= 4.83 Transcript Type= NA
chr22	46150509	46237626	46150509	46237626	+	transcript2269.chr22.nic@PPARA	transcript2269.chr22.nic	protein_coding	46150509,46151888,46176753,46188723,46198345,46215173,46218263,46219812,46231792,46235133	46150652,46151970,46176836,46188822,46198591,46215333,46218401,46220014,46232239,46237626	Gene ID= ENSG00000186951.16 TPM= 6.76 Transcript Type= NA
chr22	46238912	46241929	46238912	46241929	+	transcript2283.chr22.nnic@NA	transcript2283.chr22.nnic	NA	46238912	46241929	Gene ID= novel_gene_chr22_2284 TPM= 4.83 Transcript Type= NA
chr22	46244013	46250679	46244013	46250679	-	ENST00000314567.7@CDPF1	ENST00000314567.7	protein_coding	46250256,46248172,46247110,46244013	46250679,46248284,46247221,46245238	Gene ID= ENSG00000205643.10 TPM= 17.38 Transcript Type= protein_coding
chr22	46250396	46252598	46250396	46252598	+	transcript2285.chr22.nnic@NA	transcript2285.chr22.nnic	NA	46250396	46252598	Gene ID= novel_gene_chr22_2286 TPM= 4.83 Transcript Type= NA
chr22	46268004	46294001	46268004	46294001	+	transcript2289.chr22.nic@TTC38	transcript2289.chr22.nic	protein_coding	46268004,46268514,46269142,46272335,46273898,46275248,46278586,46281599,46283973,46285241,46287073,46288423,46289402,46289826,46292203,46292791	46268072,46268591,46269289,46272416,46274069,46275421,46278661,46281718,46284032,46285279,46287154,46288588,46289561,46289899,46292328,46294001	Gene ID= ENSG00000075234.16 TPM= 2.73 Transcript Type= NA
chr22	46268004	46294001	46268004	46294001	+	transcript2293.chr22.nic@TTC38	transcript2293.chr22.nic	protein_coding	46268004,46268514,46272335,46273898,46275248,46278586,46281599,46283973,46285241,46287073,46288423,46289402,46289826,46292203,46292791	46268072,46268591,46272416,46274069,46275421,46278661,46281718,46284032,46285279,46287154,46288588,46289561,46289899,46292328,46294001	Gene ID= ENSG00000075234.16 TPM= 11.9 Transcript Type= NA
chr22	46267964	46294008	46267964	46294008	+	ENST00000381031.7@TTC38	ENST00000381031.7	protein_coding	46267964,46268514,46272335,46273898,46275248,46278586,46281599,46283973,46285241,46287073,46288423,46289402,46289826,46292791	46268072,46268591,46272416,46274069,46275421,46278661,46281718,46284032,46285279,46287154,46288588,46289561,46289899,46294008	Gene ID= ENSG00000075234.16 TPM= 18.18 Transcript Type= protein_coding
chr22	46335425	46357340	46335425	46357340	+	ENST00000290846.8@TRMU	ENST00000290846.8	protein_coding	46335425,46337779,46343262,46346422,46350291,46352121,46352264,46353767,46355444,46355990,46356842	46335846,46337944,46343368,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357340	Gene ID= ENSG00000100416.12 TPM= 11.18 Transcript Type= protein_coding
chr22	46335425	46357337	46335425	46357337	+	ENST00000457572.5@TRMU	ENST00000457572.5	protein_coding	46335425,46337779,46343262,46346422,46350346,46352121,46352264,46353767,46355444,46355990,46356842	46335846,46337944,46343368,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357337	Gene ID= ENSG00000100416.12 TPM= 4.75 Transcript Type= nonsense_mediated_decay
chr22	46335425	46357337	46335425	46357337	+	ENST00000381021.7@TRMU	ENST00000381021.7	protein_coding	46335425,46337779,46346422,46350291,46352121,46352264,46353767,46355444,46355990,46356842	46335846,46337944,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357337	Gene ID= ENSG00000100416.12 TPM= 3.78 Transcript Type= nonsense_mediated_decay
chr22	46335401	46357335	46335401	46357335	+	ENST00000441818.5@TRMU	ENST00000441818.5	protein_coding	46335401,46337779,46346422,46350350,46352121,46352264,46353767,46355444,46355990,46356842	46335846,46337944,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357335	Gene ID= ENSG00000100416.12 TPM= 1.53 Transcript Type= nonsense_mediated_decay
chr22	46334630	46336559	46334630	46336559	-	transcript2315.chr22.nnic@NA	transcript2315.chr22.nnic	NA	46334630	46336559	Gene ID= novel_gene_chr22_2316 TPM= 3.86 Transcript Type= NA
chr22	46353087	46357333	46353087	46357333	+	transcript2313.chr22.nnic@NA	transcript2313.chr22.nnic	NA	46353087	46357333	Gene ID= novel_gene_chr22_2314 TPM= 2.9 Transcript Type= NA
chr22	46577062	46679785	46577062	46679785	+	transcript2321.chr22.nic@GRAMD4	transcript2321.chr22.nic	protein_coding	46577062,46626751,46637840,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46676600,46677147	46577290,46626961,46637960,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46676668,46679785	Gene ID= ENSG00000075240.16 TPM= 38.05 Transcript Type= NA
chr22	46577062	46679785	46577062	46679785	+	transcript2322.chr22.nnic@GRAMD4	transcript2322.chr22.nnic	protein_coding	46577062,46626751,46637840,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668818,46672843,46673670,46674657,46675468,46676600,46677147	46577290,46626961,46637960,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46676668,46679785	Gene ID= ENSG00000075240.16 TPM= 10.06 Transcript Type= NA
chr22	46577062	46679782	46577062	46679782	+	transcript2323.chr22.nnic@GRAMD4	transcript2323.chr22.nnic	protein_coding	46577062,46626751,46637840,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46677147	46577290,46626961,46637960,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46679782	Gene ID= ENSG00000075240.16 TPM= 5.23 Transcript Type= NA
chr22	46577062	46679785	46577062	46679785	+	transcript2325.chr22.nnic@GRAMD4	transcript2325.chr22.nnic	protein_coding	46577062,46626751,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46676600,46677147	46577290,46626961,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46676668,46679785	Gene ID= ENSG00000075240.16 TPM= 13.27 Transcript Type= NA
chr22	46631121	46633381	46631121	46633381	-	transcript2331.chr22.nnic@NA	transcript2331.chr22.nnic	NA	46631121	46633381	Gene ID= novel_gene_chr22_2332 TPM= 1.93 Transcript Type= NA
chr22	46684411	46738255	46684411	46738255	-	transcript2333.chr22.nnic@CERK	transcript2333.chr22.nnic	protein_coding	46738007,46720902,46720086,46712168,46711086,46707843,46701636,46699313,46695210,46693427,46691572,46689992,46687103,46684411	46738255,46721015,46720208,46712293,46711149,46707988,46701710,46699465,46695315,46693503,46691777,46690200,46687206,46686639	Gene ID= ENSG00000100422.13 TPM= 3.86 Transcript Type= NA
chr22	46684411	46738261	46684411	46738261	-	ENST00000216264.12@CERK	ENST00000216264.12	protein_coding	46738007,46720902,46720086,46712168,46711086,46707843,46701636,46699313,46695210,46693427,46691572,46689992,46684411	46738261,46721015,46720208,46712293,46711149,46707988,46701710,46699465,46695315,46693503,46691777,46690200,46687206	Gene ID= ENSG00000100422.13 TPM= 55.02 Transcript Type= protein_coding
chr22	46761894	46762563	46761894	46762563	-	ENST00000564152.1@AL118516.1	ENST00000564152.1	antisense_RNA	46761894	46762563	Gene ID= ENSG00000260708.1 TPM= 16.41 Transcript Type= antisense_RNA
chr22	46762621	47175693	46762621	47175693	+	ENST00000337137.8@TBC1D22A	ENST00000337137.8	protein_coding	46762621,46792520,46793501,46797444,46878653,46891266,46894784,46912074,46974290,46997634,47037071,47111508,47173498	46762848,46792576,46793841,46797620,46878723,46891394,46894846,46912188,46974399,46997709,47037198,47111603,47175693	Gene ID= ENSG00000054611.13 TPM= 18.34 Transcript Type= protein_coding
chr22	48489460	48750823	48489460	48750823	+	ENST00000402357.5@FAM19A5	ENST00000402357.5	protein_coding	48489460,48646597,48707717,48749839	48489704,48646746,48707844,48750823	Gene ID= ENSG00000219438.8 TPM= 4.83 Transcript Type= protein_coding
chr22	49773283	49827955	49773283	49827955	-	transcript2352.chr22.nic@BRD1	transcript2352.chr22.nic	protein_coding	49827497,49822951,49804204,49798988,49798558,49797805,49794034,49787390,49777678,49777034,49776050,49775591,49773283	49827955,49824331,49804360,49799119,49798686,49798117,49794294,49787494,49777813,49777161,49776159,49775745,49774416	Gene ID= ENSG00000100425.18 TPM= 27.51 Transcript Type= NA
chr22	49773283	49827512	49773283	49827512	-	ENST00000404760.5@BRD1	ENST00000404760.5	protein_coding	49827497,49822951,49804204,49798988,49798558,49797805,49794034,49787390,49777678,49777034,49776050,49775591,49773283	49827512,49824331,49804360,49799119,49798686,49798117,49794294,49787887,49777813,49777161,49776159,49775745,49774416	Gene ID= ENSG00000100425.18 TPM= 3.38 Transcript Type= protein_coding
chr22	49853842	49890078	49853842	49890078	+	ENST00000216268.5@ZBED4	ENST00000216268.5	protein_coding	49853842,49883334	49853989,49890078	Gene ID= ENSG00000100426.6 TPM= 6.76 Transcript Type= protein_coding
chr22	49903211	49918465	49903211	49918465	-	transcript2360.chr22.nic@ALG12	transcript2360.chr22.nic	protein_coding	49918263,49913604,49913385,49910434,49909894,49909244,49907721,49904337,49904179,49903211	49918465,49913843,49913517,49910607,49910088,49909347,49907944,49904506,49904254,49903879	Gene ID= ENSG00000182858.13 TPM= 2.9 Transcript Type= NA
chr22	49903216	49918465	49903216	49918465	-	transcript2362.chr22.nic@ALG12	transcript2362.chr22.nic	protein_coding	49918263,49913604,49913385,49910434,49909894,49909244,49907721,49904337,49903216	49918465,49913843,49913517,49910607,49910088,49909347,49907944,49904506,49904254	Gene ID= ENSG00000182858.13 TPM= 8.69 Transcript Type= NA
chr22	49918625	49927540	49918625	49927540	+	transcript2365.chr22.nnic@CRELD2	transcript2365.chr22.nnic	protein_coding	49918625,49919230,49919730,49920156,49921585,49922294,49922612,49923234,49924360,49925417,49927255	49918898,49919312,49919840,49920247,49921761,49922443,49922707,49923317,49924455,49925557,49927540	Gene ID= ENSG00000184164.14 TPM= 4.18 Transcript Type= NA
chr22	49918625	49927540	49918625	49927540	+	transcript2375.chr22.nic@CRELD2	transcript2375.chr22.nic	protein_coding	49918625,49919230,49919730,49920156,49921585,49922612,49923234,49925417,49927255	49918898,49919312,49919840,49920247,49921761,49922707,49924455,49925557,49927540	Gene ID= ENSG00000184164.14 TPM= 3.21 Transcript Type= NA
chr22	49918696	49927528	49918696	49927528	+	ENST00000328268.8@CRELD2	ENST00000328268.8	protein_coding	49918696,49919230,49919730,49920156,49921585,49922612,49923234,49924360,49925417,49927255	49918898,49919312,49919840,49920247,49921761,49922707,49923317,49924455,49925557,49927528	Gene ID= ENSG00000184164.14 TPM= 23.17 Transcript Type= protein_coding
chr22	49918635	49927540	49918635	49927540	+	ENST00000404488.7@CRELD2	ENST00000404488.7	protein_coding	49918635,49919230,49919730,49920156,49921585,49922297,49922612,49923234,49924360,49925417,49927255	49918898,49919312,49919840,49920247,49921761,49922443,49922707,49923317,49924455,49925557,49927540	Gene ID= ENSG00000184164.14 TPM= 4.18 Transcript Type= protein_coding
chr22	49932288	49933666	49932288	49933666	-	transcript2378.chr22.nnic@NA	transcript2378.chr22.nnic	NA	49932288	49933666	Gene ID= novel_gene_chr22_2379 TPM= 1.93 Transcript Type= NA
chr22	49933198	49934074	49933198	49934074	-	ENST00000623759.1@BX539320.1	ENST00000623759.1	lincRNA	49933198	49934074	Gene ID= ENSG00000278869.1 TPM= 1.93 Transcript Type= lincRNA
chr22	49960515	49964080	49960515	49964080	+	transcript2391.chr22.nic@PIM3	transcript2391.chr22.nic	protein_coding	49960515,49961318,49961442,49962689,49962940	49961234,49961368,49961811,49962865,49964080	Gene ID= ENSG00000198355.4 TPM= 65.16 Transcript Type= NA
chr22	49960513	49964080	49960513	49964080	+	ENST00000360612.4@PIM3	ENST00000360612.4	protein_coding	49960513,49961125,49961318,49961442,49962689,49962940	49961032,49961234,49961368,49961811,49962865,49964080	Gene ID= ENSG00000198355.4 TPM= 1059.91 Transcript Type= protein_coding
chr22	50185899	50199595	50185899	50199595	+	transcript2410.chr22.nnic@TRABD	transcript2410.chr22.nnic	protein_coding	50185899,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198075,50198372	50186001,50193093,50193654,50194506,50195040,50197351,50197588,50197995,50198186,50199595	Gene ID= ENSG00000170638.9 TPM= 5.02 Transcript Type= NA
chr22	50185899	50199595	50185899	50199595	+	transcript2419.chr22.nnic@TRABD	transcript2419.chr22.nnic	protein_coding	50185899,50193027,50193576,50194340,50194900,50197241,50197449,50198075,50198345	50186001,50193093,50193654,50194506,50195040,50197351,50197588,50198186,50199595	Gene ID= ENSG00000170638.9 TPM= 5.98 Transcript Type= NA
chr22	50185900	50199595	50185900	50199595	+	transcript2421.chr22.nic@TRABD	transcript2421.chr22.nic	protein_coding	50185900,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198345	50185976,50193093,50193654,50194506,50195040,50197351,50197588,50198186,50199595	Gene ID= ENSG00000170638.9 TPM= 5.98 Transcript Type= NA
chr22	50185918	50199595	50185918	50199595	+	ENST00000463233.1@TRABD	ENST00000463233.1	protein_coding	50185918,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198345	50186001,50193093,50193654,50194506,50195040,50197351,50197588,50198186,50199595	Gene ID= ENSG00000170638.9 TPM= 15.64 Transcript Type= retained_intron
chr22	50185917	50199598	50185917	50199598	+	ENST00000303434.8@TRABD	ENST00000303434.8	protein_coding	50185917,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198075,50198345	50186001,50193093,50193654,50194506,50195040,50197351,50197588,50197995,50198186,50199598	Gene ID= ENSG00000170638.9 TPM= 28.67 Transcript Type= protein_coding
chr22	50185915	50199564	50185915	50199564	+	ENST00000380909.8@TRABD	ENST00000380909.8	protein_coding	50185915,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198075,50198345	50185976,50193093,50193654,50194506,50195040,50197351,50197588,50197995,50198186,50199564	Gene ID= ENSG00000170638.9 TPM= 18.82 Transcript Type= protein_coding
chr22	50199070	50200890	50199070	50200890	-	transcript2426.chr22.nnic@AL022328.4	transcript2426.chr22.nnic	antisense_RNA	50200089,50199070	50200890,50199570	Gene ID= ENSG00000273253.2 TPM= 1.93 Transcript Type= NA
chr22	50199091	50200888	50199091	50200888	-	transcript2428.chr22.nnic@NA	transcript2428.chr22.nnic	NA	50199091	50200888	Gene ID= novel_gene_chr22_2429 TPM= 2.9 Transcript Type= NA
chr22	50200991	50217616	50200991	50217616	+	transcript2508.chr22.nnic@SELENOO	transcript2508.chr22.nnic	protein_coding	50200991,50206317,50208536,50210181,50210631,50212468,50215717,50216691,50216972,50217205	50201590,50206520,50208716,50210311,50210911,50212684,50215867,50216876,50217128,50217616	Gene ID= ENSG00000073169.13 TPM= 6.56 Transcript Type= NA
chr22	50200991	50217616	50200991	50217616	+	transcript2525.chr22.nic@SELENOO	transcript2525.chr22.nic	protein_coding	50200991,50206317,50208488,50210181,50210631,50215717,50216691,50216972,50217205	50201590,50206520,50208716,50210311,50210911,50215867,50216876,50217128,50217616	Gene ID= ENSG00000073169.13 TPM= 7.29 Transcript Type= NA
chr22	50200979	50217616	50200979	50217616	+	ENST00000380903.6@SELENOO	ENST00000380903.6	protein_coding	50200979,50206317,50208536,50210181,50210631,50215717,50216691,50216972,50217205	50201590,50206520,50208716,50210311,50210911,50215867,50216876,50217128,50217616	Gene ID= ENSG00000073169.13 TPM= 129.88 Transcript Type= protein_coding
chr22	50200991	50208446	50200991	50208446	+	transcript2541.chr22.nic@SELENOO	transcript2541.chr22.nic	protein_coding	50200991,50206317	50201590,50208446	Gene ID= ENSG00000073169.13 TPM= 4.83 Transcript Type= NA
chr22	50201017	50202912	50201017	50202912	+	transcript2542.chr22.nnic@NA	transcript2542.chr22.nnic	NA	50201017	50202912	Gene ID= novel_gene_chr22_2543 TPM= 2.9 Transcript Type= NA
chr22	50253781	50261834	50253781	50261834	-	transcript2481.chr22.nnic@MAPK12	transcript2481.chr22.nnic	protein_coding	50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50253781	50261834,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50254486	Gene ID= ENSG00000188130.13 TPM= 64 Transcript Type= NA
chr22	50252903	50261825	50252903	50261825	-	ENST00000215659.12@MAPK12	ENST00000215659.12	protein_coding	50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261825,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 604.68 Transcript Type= protein_coding
chr22	50252903	50261716	50252903	50261716	-	ENST00000622558.4@MAPK12	ENST00000622558.4	protein_coding	50261385,50261167,50258243,50257082,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261716,50261296,50258301,50257193,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 66.68 Transcript Type= protein_coding
chr22	50252903	50261545	50252903	50261545	-	ENST00000488504.5@MAPK12	ENST00000488504.5	protein_coding	50261385,50261167,50258243,50257082,50256788,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261545,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 5.22 Transcript Type= retained_intron
chr22	50252903	50261308	50252903	50261308	-	ENST00000395780.5@MAPK12	ENST00000395780.5	protein_coding	50261167,50258243,50257082,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261308,50258301,50257193,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 5.87 Transcript Type= protein_coding
chr22	50263713	50270393	50263713	50270393	-	ENST00000330651.10@MAPK11	ENST00000330651.10	protein_coding	50270177,50267820,50267569,50267371,50267257,50267127,50266934,50266540,50266226,50265582,50265321,50263713	50270393,50267949,50267627,50267482,50267286,50267174,50267048,50266611,50266305,50265660,50265494,50265027	Gene ID= ENSG00000185386.14 TPM= 1.93 Transcript Type= protein_coding
chr22	50327139	50328079	50327139	50328079	+	transcript2551.chr22.nnic@NA	transcript2551.chr22.nnic	NA	50327139	50328079	Gene ID= novel_gene_chr22_2552 TPM= 1.93 Transcript Type= NA
chr22	50343300	50444390	50343300	50444390	+	transcript2562.chr22.nnic@PPP6R2	transcript2562.chr22.nnic	protein_coding	50343300,50372020,50391867,50393750,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199	50343550,50372150,50392015,50393799,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50444390	Gene ID= ENSG00000100239.15 TPM= 8.68 Transcript Type= NA
chr22	50343300	50444390	50343300	50444390	+	transcript2564.chr22.nnic@PPP6R2	transcript2564.chr22.nnic	protein_coding	50343300,50372020,50391867,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50436988,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199	50343550,50372150,50392015,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437068,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50444390	Gene ID= ENSG00000100239.15 TPM= 19.46 Transcript Type= NA
chr22	50343304	50445090	50343304	50445090	+	ENST00000359139.7@PPP6R2	ENST00000359139.7	protein_coding	50343304,50372020,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50437506,50437843,50438174,50438599,50439698,50439961,50440822,50443866,50444203	50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50445090	Gene ID= ENSG00000100239.15 TPM= 7.09 Transcript Type= protein_coding
chr22	50343317	50445090	50343317	50445090	+	ENST00000612753.4@PPP6R2	ENST00000612753.4	protein_coding	50343317,50372020,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50436988,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199	50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437068,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50445090	Gene ID= ENSG00000100239.15 TPM= 10.27 Transcript Type= protein_coding
chr22	50343331	50444374	50343331	50444374	+	ENST00000395744.7@PPP6R2	ENST00000395744.7	protein_coding	50343331,50372020,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199	50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50444374	Gene ID= ENSG00000100239.15 TPM= 11.47 Transcript Type= protein_coding
chr22	50446806	50475049	50446806	50475049	-	transcript2554.chr22.nic@SBF1	transcript2554.chr22.nic	protein_coding	50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459952,50459470,50459255,50457034,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50446806	50475049,50468461,50467923,50467693,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459666,50459392,50457111,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240	Gene ID= ENSG00000100241.20 TPM= 56.47 Transcript Type= NA
chr22	50446806	50475049	50446806	50475049	-	transcript2556.chr22.nic@SBF1	transcript2556.chr22.nic	protein_coding	50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459952,50459470,50459255,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50446806	50475049,50468461,50467923,50467690,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459666,50459392,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240	Gene ID= ENSG00000100241.20 TPM= 16.89 Transcript Type= NA
chr22	50445000	50475024	50445000	50475024	-	ENST00000380817.7@SBF1	ENST00000380817.7	protein_coding	50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459952,50459470,50459255,50457034,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50445000	50475024,50468461,50467923,50467690,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459666,50459392,50457111,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240	Gene ID= ENSG00000100241.20 TPM= 49.23 Transcript Type= protein_coding
chr22	50502949	50507691	50502949	50507691	-	transcript2604.chr22.nnic@LMF2	transcript2604.chr22.nnic	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502949	50507691,50507104,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 6.68 Transcript Type= NA
chr22	50502949	50507703	50502949	50507703	-	transcript2613.chr22.nnic@LMF2	transcript2613.chr22.nnic	protein_coding	50507582,50506638,50506370,50506035,50505674,50505403,50505229,50505057,50504802,50504340,50503808,50502949	50507703,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 5.07 Transcript Type= NA
chr22	50502949	50507691	50502949	50507691	-	ENST00000474879.6@LMF2	ENST00000474879.6	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502949	50507691,50507035,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 32.74 Transcript Type= protein_coding
chr22	50502951	50507684	50502951	50507684	-	ENST00000216080.5@LMF2	ENST00000216080.5	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502951	50507684,50507120,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 6.68 Transcript Type= protein_coding
chr22	50508216	50523472	50508216	50523472	+	ENST00000420993.6@NCAPH2	ENST00000420993.6	protein_coding	50508216,50516447,50517427,50517577,50517741,50517973,50518133,50518649,50519190,50520965,50521543,50521741,50521986,50522181,50522343,50522501,50522671,50522821,50523017,50523235	50508445,50516548,50517482,50517661,50517809,50518052,50518278,50518732,50519320,50521036,50521609,50521848,50522039,50522251,50522415,50522569,50522720,50522922,50523166,50523472	Gene ID= ENSG00000025770.18 TPM= 41.03 Transcript Type= protein_coding
chr22	50508260	50523472	50508260	50523472	+	ENST00000299821.15@NCAPH2	ENST00000299821.15	protein_coding	50508260,50516447,50517427,50517577,50517741,50517973,50518133,50518649,50519190,50520965,50521543,50521741,50521986,50522181,50522343,50522498,50522671,50522821,50523017,50523235	50508445,50516548,50517482,50517661,50517809,50518052,50518278,50518732,50519320,50521036,50521609,50521848,50522039,50522251,50522415,50522569,50522720,50522922,50523166,50523472	Gene ID= ENSG00000025770.18 TPM= 8.21 Transcript Type= protein_coding
chr22	50523568	50525606	50523568	50525606	-	ENST00000395693.7@SCO2	ENST00000395693.7	protein_coding	50525472,50523568	50525606,50524424	Gene ID= ENSG00000130489.14 TPM= 23.17 Transcript Type= protein_coding
chr22	50523574	50525619	50523574	50525619	-	transcript2625.chr22.nnic@SCO2	transcript2625.chr22.nnic	protein_coding	50525523,50523574	50525619,50524424	Gene ID= ENSG00000284194.1 TPM= 4.83 Transcript Type= NA
chr22	50525752	50530056	50525752	50530056	-	ENST00000252029.7@TYMP	ENST00000252029.7	protein_coding	50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525752	50530056,50529719,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 28.8 Transcript Type= protein_coding
chr22	50525755	50529996	50525755	50529996	-	ENST00000487577.5@TYMP	ENST00000487577.5	protein_coding	50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525755	50529996,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 7.56 Transcript Type= retained_intron
chr22	50525756	50530032	50525756	50530032	-	ENST00000395678.7@TYMP	ENST00000395678.7	protein_coding	50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525756	50530032,50529731,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 4.18 Transcript Type= protein_coding
chr22	50568862	50578417	50568862	50578417	-	ENST00000312108.11@CPT1B	ENST00000312108.11	protein_coding	50578386,50577775,50577324,50576857,50576536,50576198,50576035,50574493,50574335,50573520,50572875,50572203,50572006,50571375,50571158,50570891,50570293,50569576,50569336,50568862	50578417,50577934,50577463,50577034,50576637,50576335,50576112,50574600,50574419,50573715,50573060,50572308,50572122,50571539,50571292,50571043,50570406,50569668,50569421,50569081	Gene ID= ENSG00000205560.12 TPM= 136.76 Transcript Type= protein_coding
chr22	50569084	50578455	50569084	50578455	-	ENST00000395650.6@CPT1B	ENST00000395650.6	protein_coding	50578386,50577775,50577324,50576857,50576536,50576198,50576035,50574493,50574335,50573520,50572875,50572203,50572006,50571375,50571158,50570891,50570293,50569576,50569084	50578455,50577934,50577463,50577034,50576637,50576335,50576112,50574600,50574419,50573715,50573060,50572308,50572122,50571539,50571292,50571043,50570406,50569668,50569421	Gene ID= ENSG00000205560.12 TPM= 56.63 Transcript Type= protein_coding
chr22	50578949	50582999	50578949	50582999	-	ENST00000406938.2@CHKB	ENST00000406938.2	protein_coding	50582558,50582249,50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578949	50582999,50582357,50581862,50581553,50580660,50580416,50580271,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 6.95 Transcript Type= protein_coding
chr22	50578963	50582845	50578963	50582845	-	ENST00000481673.5@CHKB	ENST00000481673.5	protein_coding	50582558,50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578963	50582845,50582357,50581553,50580660,50580416,50580271,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 1.16 Transcript Type= retained_intron
chr22	50578966	50582820	50578966	50582820	-	ENST00000479003.5@CHKB	ENST00000479003.5	protein_coding	50581749,50581420,50580565,50580190,50579974,50579727,50579426,50578966	50582820,50581553,50580660,50580416,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 5.79 Transcript Type= retained_intron
chr22	50625018	50628170	50625018	50628170	-	ENST00000356098.9@ARSA	ENST00000356098.9	protein_coding	50627946,50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625018	50628170,50627792,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 5.63 Transcript Type= protein_coding
chr22	50625018	50628172	50625018	50628172	-	ENST00000216124.9@ARSA	ENST00000216124.9	protein_coding	50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625018	50628172,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 5.63 Transcript Type= protein_coding
chr22	50625029	50628173	50625029	50628173	-	ENST00000453344.6@ARSA	ENST00000453344.6	protein_coding	50627946,50627166,50626834,50626591,50626154,50625936,50625579,50625029	50628173,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 3.21 Transcript Type= protein_coding
chr22	50674642	50733210	50674642	50733210	+	ENST00000262795.5@SHANK3	ENST00000262795.5	protein_coding	50674642,50675048,50676622,50678585,50678769,50679019,50679312,50683340,50684585,50694775,50695928,50696904,50697244,50697565,50698690,50703860,50704166,50704738,50704964,50706072,50711615,50714917,50715669,50720184,50730721	50674704,50675251,50676693,50678693,50678920,50679186,50679428,50683417,50684651,50695048,50695932,50696914,50697267,50697715,50698803,50703935,50704248,50704862,50705096,50706152,50711638,50715047,50715753,50722437,50733210	Gene ID= ENSG00000251322.7 TPM= 26.06 Transcript Type= protein_coding
chr22	50722453	50724016	50722453	50724016	+	transcript2685.chr22.nnic@NA	transcript2685.chr22.nnic	NA	50722453	50724016	Gene ID= novel_gene_chr22_2686 TPM= 3.86 Transcript Type= NA
chr22	50767506	50783642	50767506	50783642	-	ENST00000395593.7@RABL2B	ENST00000395593.7	protein_coding	50783501,50782891,50782188,50777952,50776670,50775772,50769905,50769425,50769041,50767506	50783642,50783045,50782351,50777981,50776749,50775851,50770016,50769549,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 2.41 Transcript Type= protein_coding
chr22	50767506	50783663	50767506	50783663	-	ENST00000395595.7@RABL2B	ENST00000395595.7	protein_coding	50783501,50783039,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767506	50783663,50783286,50782351,50777981,50776749,50775851,50770016,50769552,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 2.41 Transcript Type= protein_coding
chr22	50769527	50783662	50769527	50783662	-	transcript2691.chr22.nic@RABL2B	transcript2691.chr22.nic	protein_coding	50783501,50782188,50777952,50776670,50775772,50769527	50783662,50782347,50777981,50776749,50775851,50770016	Gene ID= ENSG00000079974.17 TPM= 1.93 Transcript Type= NA
chrM	1	575	1	575	+	transcript31.chrM.nnic@NA	transcript31.chrM.nnic	NA	1	575	Gene ID= novel_gene_chrM_32 TPM= 116.8 Transcript Type= NA
chrM	648	1601	648	1601	+	ENST00000389680.2@MT-RNR1	ENST00000389680.2	Mt_rRNA	648	1601	Gene ID= ENSG00000211459.2 TPM= 273.18 Transcript Type= Mt_rRNA
chrM	1671	3229	1671	3229	+	ENST00000387347.2@MT-RNR2	ENST00000387347.2	Mt_rRNA	1671	3229	Gene ID= ENSG00000210082.2 TPM= 846.58 Transcript Type= Mt_rRNA
chrM	3307	4262	3307	4262	+	ENST00000361390.2@MT-ND1	ENST00000361390.2	protein_coding	3307	4262	Gene ID= ENSG00000198888.2 TPM= 541.54 Transcript Type= protein_coding
chrM	3414	5511	3414	5511	+	transcript33.chrM.nnic@NA	transcript33.chrM.nnic	NA	3414	5511	Gene ID= novel_gene_chrM_34 TPM= 10.62 Transcript Type= NA
chrM	4470	5511	4470	5511	+	ENST00000361453.3@MT-ND2	ENST00000361453.3	protein_coding	4470	5511	Gene ID= ENSG00000198763.3 TPM= 165.07 Transcript Type= protein_coding
chrM	5583	5899	5583	5899	+	transcript25.chrM.nnic@NA	transcript25.chrM.nnic	NA	5583	5899	Gene ID= novel_gene_chrM_26 TPM= 41.51 Transcript Type= NA
chrM	5904	7445	5904	7445	+	ENST00000361624.2@MT-CO1	ENST00000361624.2	protein_coding	5904	7445	Gene ID= ENSG00000198804.2 TPM= 55.99 Transcript Type= protein_coding
chrM	6813	9990	6813	9990	+	transcript27.chrM.nnic@NA	transcript27.chrM.nnic	NA	6813	9990	Gene ID= novel_gene_chrM_28 TPM= 47.3 Transcript Type= NA
chrM	7586	8269	7586	8269	+	ENST00000361739.1@MT-CO2	ENST00000361739.1	protein_coding	7586	8269	Gene ID= ENSG00000198712.1 TPM= 242.29 Transcript Type= protein_coding
chrM	8527	9207	8527	9207	+	ENST00000361899.2@MT-ATP6	ENST00000361899.2	protein_coding	8527	9207	Gene ID= ENSG00000198899.2 TPM= 288.63 Transcript Type= protein_coding
chrM	9207	9990	9207	9990	+	ENST00000362079.2@MT-CO3	ENST00000362079.2	protein_coding	9207	9990	Gene ID= ENSG00000198938.2 TPM= 899.67 Transcript Type= protein_coding
chrM	9218	12387	9218	12387	-	transcript177.chrM.nnic@NA	transcript177.chrM.nnic	NA	9218	12387	Gene ID= novel_gene_chrM_178 TPM= 159.28 Transcript Type= NA
chrM	10059	10404	10059	10404	+	ENST00000361227.2@MT-ND3	ENST00000361227.2	protein_coding	10059	10404	Gene ID= ENSG00000198840.2 TPM= 125.49 Transcript Type= protein_coding
chrM	10470	10766	10470	10766	+	ENST00000361335.1@MT-ND4L	ENST00000361335.1	protein_coding	10470	10766	Gene ID= ENSG00000212907.2 TPM= 5.79 Transcript Type= protein_coding
chrM	10760	12137	10760	12137	+	ENST00000361381.2@MT-ND4	ENST00000361381.2	protein_coding	10760	12137	Gene ID= ENSG00000198886.2 TPM= 307.93 Transcript Type= protein_coding
chrM	12337	14148	12337	14148	+	ENST00000361567.2@MT-ND5	ENST00000361567.2	protein_coding	12337	14148	Gene ID= ENSG00000198786.2 TPM= 42.47 Transcript Type= protein_coding
chrM	12529	15887	12529	15887	+	transcript53.chrM.nnic@NA	transcript53.chrM.nnic	NA	12529	15887	Gene ID= novel_gene_chrM_54 TPM= 29.92 Transcript Type= NA
chrM	14149	14673	14149	14673	-	ENST00000361681.2@MT-ND6	ENST00000361681.2	protein_coding	14149	14673	Gene ID= ENSG00000198695.2 TPM= 29.92 Transcript Type= protein_coding
chrM	14747	15887	14747	15887	+	ENST00000361789.2@MT-CYB	ENST00000361789.2	protein_coding	14747	15887	Gene ID= ENSG00000198727.2 TPM= 271.25 Transcript Type= protein_coding
chrM	16037	16570	16037	16570	+	transcript163.chrM.nnic@NA	transcript163.chrM.nnic	NA	16037	16570	Gene ID= novel_gene_chrM_164 TPM= 13.51 Transcript Type= NA
chrX	304750	318819	304750	318819	-	ENST00000326153.9@GTPBP6	ENST00000326153.9	protein_coding	318439,316914,315229,314890,314150,312766,311419,307732,307360,304750	318819,317051,315299,315020,314217,312924,311627,307880,307512,305197	Gene ID= ENSG00000178605.13 TPM= 114.87 Transcript Type= protein_coding
chrX	1386152	1392724	1386152	1392724	-	ENST00000381401.10@SLC25A6	ENST00000381401.10	protein_coding	1391899,1389241,1387279,1386152	1392724,1389727,1387419,1386759	Gene ID= ENSG00000169100.13 TPM= 187.27 Transcript Type= protein_coding
chrX	1403141	1452873	1403141	1452873	-	ENST00000381317.8@ASMTL	ENST00000381317.8	protein_coding	1452748,1442186,1439097,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403141	1452873,1442317,1439144,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489	Gene ID= ENSG00000169093.15 TPM= 6.76 Transcript Type= protein_coding
chrX	1591593	1602514	1591593	1602514	+	ENST00000313871.8@AKAP17A	ENST00000313871.8	protein_coding	1591593,1593444,1595384,1599192,1600659	1591769,1594224,1595532,1599432,1602514	Gene ID= ENSG00000197976.11 TPM= 28.96 Transcript Type= protein_coding
chrX	1591623	1602502	1591623	1602502	+	ENST00000474361.6@AKAP17A	ENST00000474361.6	protein_coding	1591623,1593444,1595384,1599192,1600138,1600659	1591769,1594224,1595532,1599432,1600207,1602502	Gene ID= ENSG00000197976.11 TPM= 42.47 Transcript Type= nonsense_mediated_decay
chrX	2691179	2741309	2691179	2741309	+	ENST00000381192.8@CD99	ENST00000381192.8	protein_coding	2691179,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2738200,2740779	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2738256,2741309	Gene ID= ENSG00000002586.18 TPM= 31.37 Transcript Type= protein_coding
chrX	2691310	2733672	2691310	2733672	+	ENST00000482405.7@CD99	ENST00000482405.7	protein_coding	2691310,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2733357	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2733672	Gene ID= ENSG00000002586.18 TPM= 5.31 Transcript Type= processed_transcript
chrX	7048920	7148190	7048920	7148190	-	ENST00000381077.9@PUDP	ENST00000381077.9	protein_coding	7148053,7105620,7077220,7048920	7148190,7105838,7077449,7050472	Gene ID= ENSG00000130021.13 TPM= 34.75 Transcript Type= protein_coding
chrX	7147721	7353066	7147721	7353066	+	transcript22.chrX.nnic@STS	transcript22.chrX.nnic	protein_coding	7147721,7190880,7253196,7257242,7257466,7259349,7275951,7305046,7325339,7333986,7349888	7148083,7191008,7253336,7257363,7257588,7259772,7276087,7305183,7325498,7334107,7353066	Gene ID= ENSG00000101846.6 TPM= 3.86 Transcript Type= NA
chrX	7898247	7927443	7898247	7927443	-	ENST00000381042.8@PNPLA4	ENST00000381042.8	protein_coding	7927286,7925940,7922004,7921713,7912028,7901989,7898247	7927443,7926132,7922098,7921848,7912093,7902141,7900817	Gene ID= ENSG00000006757.11 TPM= 1.93 Transcript Type= protein_coding
chrX	7925709	7927430	7925709	7927430	-	transcript38.chrX.nnic@NA	transcript38.chrX.nnic	NA	7925709	7927430	Gene ID= novel_gene_chrX_39 TPM= 1.93 Transcript Type= NA
chrX	8528874	8732186	8528874	8732186	-	ENST00000262648.7@ANOS1	ENST00000262648.7	protein_coding	8731830,8699698,8623608,8597034,8587794,8585267,8570499,8568232,8553952,8539664,8536771,8535591,8534319,8528874	8732186,8699745,8623670,8597256,8587978,8585396,8570704,8568376,8554098,8539758,8536942,8535811,8534460,8533053	Gene ID= ENSG00000011201.11 TPM= 4.83 Transcript Type= protein_coding
chrX	10015255	10016762	10015255	10016762	+	transcript52.chrX.nnic@NA	transcript52.chrX.nnic	NA	10015255	10016762	Gene ID= novel_gene_chrX_53 TPM= 1.93 Transcript Type= NA
chrX	10015255	10018462	10015255	10018462	+	transcript58.chrX.nnic@NA	transcript58.chrX.nnic	NA	10015255	10018462	Gene ID= novel_gene_chrX_59 TPM= 1.93 Transcript Type= NA
chrX	10127552	10141634	10127552	10141634	+	transcript50.chrX.nic@WWC3	transcript50.chrX.nic	protein_coding	10127552,10128557,10129956,10134432,10136633,10138709,10139413,10141435	10128161,10128708,10130121,10134596,10136725,10138936,10139540,10141634	Gene ID= ENSG00000047644.18 TPM= 1.93 Transcript Type= NA
chrX	11111304	11123075	11111304	11123075	+	transcript74.chrX.nnic@HCCS	transcript74.chrX.nnic	protein_coding	11111304,11112019,11114835,11117267,11118501,11120907,11121612	11111518,11112160,11114986,11117415,11118620,11121032,11123075	Gene ID= ENSG00000004961.14 TPM= 2.25 Transcript Type= NA
chrX	11111301	11123078	11111301	11123078	+	ENST00000321143.8@HCCS	ENST00000321143.8	protein_coding	11111301,11112019,11114835,11117267,11118501,11120907,11121612	11111460,11112160,11114986,11117415,11118620,11120993,11123078	Gene ID= ENSG00000004961.14 TPM= 7.08 Transcript Type= protein_coding
chrX	11111304	11123073	11111304	11123073	+	transcript78.chrX.nnic@HCCS	transcript78.chrX.nnic	protein_coding	11111304,11112019,11114835,11117267,11118501,11121612	11111518,11112160,11114986,11117415,11118620,11123073	Gene ID= ENSG00000004961.14 TPM= 2.25 Transcript Type= NA
chrX	11111342	11121879	11111342	11121879	+	ENST00000380763.7@HCCS	ENST00000380763.7	protein_coding	11111342,11112019,11114835,11117267,11118501,11120907,11121612	11111423,11112160,11114986,11117415,11118620,11120993,11121879	Gene ID= ENSG00000004961.14 TPM= 1.77 Transcript Type= protein_coding
chrX	11111365	11121879	11111365	11121879	+	ENST00000380762.4@HCCS	ENST00000380762.4	protein_coding	11111365,11112019,11114835,11117267,11118501,11120907,11121612	11111518,11112160,11114986,11117415,11118620,11120993,11121879	Gene ID= ENSG00000004961.14 TPM= 16.25 Transcript Type= protein_coding
chrX	11758159	11775753	11758159	11775753	+	ENST00000312196.8@MSL3	ENST00000312196.8	protein_coding	11758159,11759793,11760403,11760837,11761500,11762130,11762837,11763780,11765467,11768573,11772156,11772621,11774980	11758365,11759875,11760498,11760937,11761582,11762252,11762997,11763938,11765729,11768682,11772255,11772705,11775753	Gene ID= ENSG00000005302.17 TPM= 10.62 Transcript Type= protein_coding
chrX	11758159	11775747	11758159	11775747	+	ENST00000361672.6@MSL3	ENST00000361672.6	protein_coding	11758159,11759793,11760403,11760837,11762130,11762837,11763780,11765467,11768573,11772156,11772621,11774980	11758365,11759875,11760498,11760937,11762252,11762997,11763938,11765729,11768682,11772255,11772705,11775747	Gene ID= ENSG00000005302.17 TPM= 2.9 Transcript Type= protein_coding
chrX	12975108	12977227	12975108	12977227	+	ENST00000451311.6@TMSB4X	ENST00000451311.6	protein_coding	12975108,12976246,12976777	12975168,12976361,12977227	Gene ID= ENSG00000205542.10 TPM= 249.05 Transcript Type= protein_coding
chrX	12975110	12977226	12975110	12977226	+	ENST00000380636.1@TMSB4X	ENST00000380636.1	protein_coding	12975110,12976777	12976361,12977226	Gene ID= ENSG00000205542.10 TPM= 3.86 Transcript Type= protein_coding
chrX	13689133	13691985	13689133	13691985	+	transcript95.chrX.nnic@NA	transcript95.chrX.nnic	NA	13689133	13691985	Gene ID= novel_gene_chrX_96 TPM= 1.93 Transcript Type= NA
chrX	13712244	13734635	13712244	13734635	-	ENST00000359680.9@TRAPPC2	ENST00000359680.9	protein_coding	13734525,13719871,13716534,13716004,13712244	13734635,13719982,13716678,13716089,13714505	Gene ID= ENSG00000196459.13 TPM= 2.9 Transcript Type= protein_coding
chrX	13712247	13734556	13712247	13734556	-	ENST00000380579.5@TRAPPC2	ENST00000380579.5	protein_coding	13734525,13734044,13719871,13716534,13716004,13712247	13734556,13734185,13719982,13716678,13716089,13714505	Gene ID= ENSG00000196459.13 TPM= 1.93 Transcript Type= protein_coding
chrX	14007543	14029826	14007543	14029826	-	transcript109.chrX.nic@GEMIN8	transcript109.chrX.nic	protein_coding	14029777,14026140,14021464,14020078,14007543	14029826,14026221,14021511,14020534,14009169	Gene ID= ENSG00000046647.13 TPM= 1.93 Transcript Type= NA
chrX	14008673	14029893	14008673	14029893	-	ENST00000398355.7@GEMIN8	ENST00000398355.7	protein_coding	14029777,14021464,14020078,14008673	14029893,14021511,14020534,14009169	Gene ID= ENSG00000046647.13 TPM= 1.45 Transcript Type= protein_coding
chrX	15243987	15270061	15243987	15270061	-	ENST00000380485.7@ASB9	ENST00000380485.7	protein_coding	15269781,15258866,15254737,15252254,15250430,15248683,15243987	15270061,15258945,15254844,15252404,15250564,15248935,15244630	Gene ID= ENSG00000102048.15 TPM= 1.93 Transcript Type= protein_coding
chrX	15279825	15282087	15279825	15282087	-	transcript129.chrX.nnic@NA	transcript129.chrX.nnic	NA	15279825	15282087	Gene ID= novel_gene_chrX_130 TPM= 4.83 Transcript Type= NA
chrX	15319451	15335580	15319451	15335580	-	ENST00000333590.5@PIGA	ENST00000333590.5	protein_coding	15335501,15331216,15325914,15325020,15324665,15319451	15335580,15331992,15326046,15325152,15324871,15321772	Gene ID= ENSG00000165195.15 TPM= 2.41 Transcript Type= protein_coding
chrX	15319457	15335554	15319457	15335554	-	ENST00000635598.1@PIGA	ENST00000635598.1	protein_coding	15335501,15331590,15325914,15325020,15324665,15319457	15335554,15331992,15326046,15325152,15324871,15321772	Gene ID= ENSG00000165195.15 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chrX	15345591	15493253	15345591	15493253	-	transcript134.chrX.nnic@PIR	transcript134.chrX.nnic	protein_coding	15493190,15491162,15479729,15459657,15455848,15425906,15407506,15397449,15390185,15363109,15358003,15355150,15353068,15347164,15345591	15493253,15491309,15479821,15459740,15456054,15425990,15407550,15397531,15390251,15363319,15358193,15355298,15353168,15347359,15346259	Gene ID= ENSG00000087842.10 TPM= 4.83 Transcript Type= NA
chrX	15384799	15493341	15384799	15493341	-	ENST00000380420.9@PIR	ENST00000380420.9	protein_coding	15493190,15491162,15479729,15459657,15455848,15425906,15407506,15397449,15390185,15384799	15493341,15491309,15479821,15459740,15456054,15425990,15407550,15397531,15390251,15385116	Gene ID= ENSG00000087842.10 TPM= 13.51 Transcript Type= protein_coding
chrX	15675704	15703724	15675704	15703724	+	transcript145.chrX.nnic@CA5BP1	transcript145.chrX.nnic	transcribed_unprocessed_pseudogene	15675704,15681001,15688661,15692963,15702782	15675778,15681047,15688858,15693058,15703724	Gene ID= ENSG00000186312.10 TPM= 5.79 Transcript Type= NA
chrX	15790452	15828321	15790452	15828321	+	transcript148.chrX.nnic@ZRSR2	transcript148.chrX.nnic	protein_coding	15790452,15790934,15799872,15803688,15804111,15808233,15809200,15815677,15818587,15820207,15822731,15824242,15827189	15790536,15791013,15799953,15803796,15804197,15808271,15809318,15815890,15818642,15820316,15823196,15824372,15828321	Gene ID= ENSG00000169249.12 TPM= 1.93 Transcript Type= NA
chrX	15790472	15823260	15790472	15823260	+	ENST00000307771.7@ZRSR2	ENST00000307771.7	protein_coding	15790472,15790934,15799872,15803688,15804111,15808233,15809200,15815677,15818587,15820207,15822731	15790536,15791013,15799953,15803796,15804197,15808271,15809318,15815890,15818642,15820316,15823260	Gene ID= ENSG00000169249.12 TPM= 35.72 Transcript Type= protein_coding
chrX	15825808	15854890	15825808	15854890	-	transcript159.chrX.nic@AP1S2	transcript159.chrX.nic	protein_coding	15854688,15852346,15845903,15845379,15840497,15825808	15854890,15852524,15846011,15845516,15840591,15827372	Gene ID= ENSG00000182287.14 TPM= 63.23 Transcript Type= NA
chrX	16719612	16760435	16719612	16760435	+	transcript182.chrX.nnic@SYAP1	transcript182.chrX.nnic	protein_coding	16719612,16735265,16736166,16741716,16743701,16754945,16756663,16757162,16760232	16719899,16735345,16736232,16741789,16743840,16755093,16756721,16757309,16760435	Gene ID= ENSG00000169895.5 TPM= 1.93 Transcript Type= NA
chrX	16719582	16746198	16719582	16746198	+	transcript184.chrX.nic@SYAP1	transcript184.chrX.nic	protein_coding	16719582,16735227,16736166,16741716,16743701	16719899,16735345,16736232,16741789,16746198	Gene ID= ENSG00000169895.5 TPM= 4.83 Transcript Type= NA
chrX	16786377	16837685	16786377	16837685	+	transcript203.chrX.nic@TXLNG	transcript203.chrX.nic	protein_coding	16786377,16818574,16820164,16828094,16829576,16832623,16834283,16837593	16786589,16818877,16820255,16828264,16829770,16832742,16834357,16837685	Gene ID= ENSG00000086712.12 TPM= 6.76 Transcript Type= NA
chrX	16786427	16844519	16786427	16844519	+	ENST00000380122.9@TXLNG	ENST00000380122.9	protein_coding	16786427,16818574,16820164,16828094,16829576,16832623,16834283,16837593,16839821,16841428	16786589,16818877,16820255,16828264,16829770,16832742,16834357,16837685,16839916,16844519	Gene ID= ENSG00000086712.12 TPM= 2.9 Transcript Type= protein_coding
chrX	16844341	16870414	16844341	16870414	-	ENST00000380087.6@RBBP7	ENST00000380087.6	protein_coding	16870038,16869076,16862955,16858676,16857594,16853682,16852749,16852551,16852046,16849244,16845828,16844341	16870414,16869220,16863100,16858849,16857709,16853842,16852875,16852628,16852122,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 24.45 Transcript Type= protein_coding
chrX	16844654	16869886	16844654	16869886	-	ENST00000380084.8@RBBP7	ENST00000380084.8	protein_coding	16869494,16869076,16862955,16858676,16857594,16853682,16852749,16852551,16852046,16849244,16845828,16844654	16869886,16869220,16863100,16858849,16857709,16853842,16852875,16852628,16852122,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 3.54 Transcript Type= protein_coding
chrX	16844650	16870328	16844650	16870328	-	transcript198.chrX.nic@RBBP7	transcript198.chrX.nic	protein_coding	16870038,16869076,16862955,16858676,16857594,16852551,16852046,16849244,16845828,16844650	16870328,16869220,16863100,16858849,16857709,16853842,16852122,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 7.8 Transcript Type= NA
chrX	16844650	16870413	16844650	16870413	-	transcript202.chrX.nic@RBBP7	transcript202.chrX.nic	protein_coding	16870038,16869076,16862955,16858676,16857594,16852046,16849244,16845828,16844650	16870413,16869220,16863100,16858849,16857709,16853842,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 7.8 Transcript Type= NA
chrX	16844690	16870361	16844690	16870361	-	ENST00000404022.5@RBBP7	ENST00000404022.5	protein_coding	16870038,16869076,16862955,16858676,16857594,16853682,16852749,16852551,16852046,16849244,16845828,16844690	16870361,16869220,16863100,16858822,16857709,16853842,16852875,16852628,16852122,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 272.22 Transcript Type= protein_coding
chrX	17737468	17754985	17737468	17754985	+	ENST00000380045.7@SCML1	ENST00000380045.7	protein_coding	17737468,17746018,17749400,17749894,17751815,17753258	17737680,17746098,17749504,17750293,17751966,17754985	Gene ID= ENSG00000047634.14 TPM= 5.79 Transcript Type= protein_coding
chrX	17800049	17860907	17800049	17860907	-	transcript209.chrX.nnic@RAI2	transcript209.chrX.nnic	protein_coding	17860509,17800049	17860907,17802034	Gene ID= ENSG00000131831.17 TPM= 4.83 Transcript Type= NA
chrX	18633415	18635391	18633415	18635391	+	transcript212.chrX.nnic@NA	transcript212.chrX.nnic	NA	18633415	18635391	Gene ID= novel_gene_chrX_213 TPM= 1.93 Transcript Type= NA
chrX	19343893	19361705	19343893	19361705	+	ENST00000379806.9@PDHA1	ENST00000379806.9	protein_coding	19343893,19346510,19349312,19349937,19351281,19353082,19354491,19355349,19355686,19357652,19358916,19359489	19344094,19346623,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361705	Gene ID= ENSG00000131828.13 TPM= 38.21 Transcript Type= protein_coding
chrX	19343893	19361705	19343893	19361705	+	ENST00000545074.5@PDHA1	ENST00000545074.5	protein_coding	19343893,19349312,19349937,19351260,19353082,19354491,19355349,19355686,19357652,19358916,19359489	19344094,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361705	Gene ID= ENSG00000131828.13 TPM= 7.32 Transcript Type= protein_coding
chrX	19343893	19361705	19343893	19361705	+	ENST00000540249.5@PDHA1	ENST00000540249.5	protein_coding	19343893,19349312,19349937,19351281,19353082,19355349,19355686,19357652,19358916,19359489	19344094,19349371,19350110,19351407,19353173,19355504,19355757,19357719,19359024,19361705	Gene ID= ENSG00000131828.13 TPM= 5.07 Transcript Type= protein_coding
chrX	19343933	19361685	19343933	19361685	+	ENST00000422285.6@PDHA1	ENST00000422285.6	protein_coding	19343933,19349312,19349937,19351281,19353082,19354491,19355349,19355686,19357652,19358916,19359489	19344094,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361685	Gene ID= ENSG00000131828.13 TPM= 60.41 Transcript Type= protein_coding
chrX	19916260	19991061	19916260	19991061	-	transcript238.chrX.nnic@BCLAF3	transcript238.chrX.nnic	protein_coding	19990908,19970224,19966080,19965044,19955391,19953778,19952988,19950753,19937418,19916260	19991061,19970298,19966649,19965706,19955566,19953892,19953051,19950868,19937532,19917334	Gene ID= ENSG00000173681.16 TPM= 1.93 Transcript Type= NA
chrX	20124518	20141844	20124518	20141844	-	ENST00000379607.9@EIF1AX	ENST00000379607.9	protein_coding	20141625,20138539,20135738,20133957,20132182,20130516,20124518	20141844,20138622,20135841,20134007,20132263,20130607,20128311	Gene ID= ENSG00000173674.10 TPM= 27.03 Transcript Type= protein_coding
chrX	20154313	20219022	20154313	20219022	-	transcript270.chrX.nic@RPS6KA3	transcript270.chrX.nic	protein_coding	20218800,20209288,20204022,20195065,20194189,20193487,20188497,20187828,20186296,20176996,20176434,20176250,20175164,20172746,20169402,20167589,20164899,20162964,20161644,20156109,20154313	20219022,20209404,20204103,20195145,20194268,20193593,20188534,20187970,20186366,20177084,20176498,20176352,20175288,20172871,20169491,20167747,20165060,20163040,20161761,20156249,20155520	Gene ID= ENSG00000177189.12 TPM= 2.9 Transcript Type= NA
chrX	21730736	21758113	21730736	21758113	-	transcript291.chrX.nic@SMPX	transcript291.chrX.nic	protein_coding	21757942,21754246,21743750,21737549,21730736	21758113,21754302,21743836,21737697,21733757	Gene ID= ENSG00000091482.5 TPM= 4.83 Transcript Type= NA
chrX	21705972	21758163	21705972	21758163	-	ENST00000379494.3@SMPX	ENST00000379494.3	protein_coding	21757942,21754246,21743750,21737549,21705972	21758163,21754302,21743836,21737697,21706394	Gene ID= ENSG00000091482.5 TPM= 129.35 Transcript Type= protein_coding
chrX	21839587	21849876	21839587	21849876	+	transcript311.chrX.nic@MBTPS2	transcript311.chrX.nic	protein_coding	21839587,21843170,21845171	21839809,21843318,21849876	Gene ID= ENSG00000012174.11 TPM= 1.93 Transcript Type= NA
chrX	21839636	21885424	21839636	21885424	+	ENST00000379484.9@MBTPS2	ENST00000379484.9	protein_coding	21839636,21843170,21845171,21851509,21853376,21868467,21869498,21878042,21878497,21880897,21882433	21839809,21843318,21845384,21851612,21853503,21868585,21869678,21878136,21878692,21880972,21885424	Gene ID= ENSG00000012174.11 TPM= 19.31 Transcript Type= protein_coding
chrX	21940573	21994835	21940573	21994835	+	ENST00000404933.6@SMS	ENST00000404933.6	protein_coding	21940573,21967196,21971897,21972507,21977061,21977960,21978877,21984304,21985144,21992597,21994312	21940873,21967316,21971990,21972571,21977236,21978114,21978966,21984418,21985223,21992712,21994835	Gene ID= ENSG00000102172.15 TPM= 29.92 Transcript Type= protein_coding
chrX	23667446	23686399	23667446	23686399	+	ENST00000379341.8@PRDX4	ENST00000379341.8	protein_coding	23667446,23671529,23674990,23679165,23682396,23683671,23686285	23667811,23671646,23675106,23679287,23682526,23683705,23686399	Gene ID= ENSG00000123131.12 TPM= 51.16 Transcript Type= protein_coding
chrX	23702253	23743273	23702253	23743273	-	ENST00000379303.9@ACOT9	ENST00000379303.9	protein_coding	23743125,23735919,23734341,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23702253	23743273,23736016,23734367,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982	Gene ID= ENSG00000123130.16 TPM= 7.72 Transcript Type= protein_coding
chrX	23703671	23743276	23703671	23743276	-	ENST00000336430.11@ACOT9	ENST00000336430.11	protein_coding	23743125,23735919,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23703671	23743276,23736016,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982	Gene ID= ENSG00000123130.16 TPM= 6.76 Transcript Type= protein_coding
chrX	23783136	23786210	23783136	23786210	+	transcript336.chrX.nic@SAT1	transcript336.chrX.nic	protein_coding	23783136,23783658,23783800,23785520,23785686	23783417,23783709,23785429,23785560,23786210	Gene ID= ENSG00000130066.16 TPM= 9.65 Transcript Type= NA
chrX	23783173	23786226	23783173	23786226	+	ENST00000379270.4@SAT1	ENST00000379270.4	protein_coding	23783173,23783658,23783800,23785328,23785520,23785686	23783417,23783709,23783883,23785429,23785560,23786226	Gene ID= ENSG00000130066.16 TPM= 28.96 Transcript Type= protein_coding
chrX	23783197	23786210	23783197	23786210	+	ENST00000489394.5@SAT1	ENST00000489394.5	protein_coding	23783197,23783658,23783800,23784294,23785328,23785520,23785686	23783417,23783709,23783883,23784403,23785429,23785560,23786210	Gene ID= ENSG00000130066.16 TPM= 4.83 Transcript Type= processed_transcript
chrX	23833360	23907953	23833360	23907953	-	transcript341.chrX.nic@APOO	transcript341.chrX.nic	protein_coding	23907694,23880845,23878915,23874403,23868593,23858642,23856302,23840313,23833360	23907953,23880952,23879034,23874457,23868688,23858733,23856382,23840377,23833510	Gene ID= ENSG00000184831.13 TPM= 15.44 Transcript Type= NA
chrX	23833353	23907934	23833353	23907934	-	ENST00000379226.8@APOO	ENST00000379226.8	protein_coding	23907694,23880845,23878915,23874403,23868593,23858642,23856302,23840313,23833353	23907934,23880952,23879034,23874457,23868688,23858733,23856382,23840377,23833612	Gene ID= ENSG00000184831.13 TPM= 1.93 Transcript Type= protein_coding
chrX	24054716	24077971	24054716	24077971	+	ENST00000253039.8@EIF2S3	ENST00000253039.8	protein_coding	24054716,24055615,24057421,24057633,24060088,24062416,24064201,24065998,24067964,24071558,24073091,24076722	24055037,24055678,24057548,24057754,24060182,24062574,24064335,24066092,24068108,24071727,24073263,24077971	Gene ID= ENSG00000130741.10 TPM= 157.35 Transcript Type= protein_coding
chrX	24073648	24074632	24073648	24074632	-	transcript355.chrX.nnic@NA	transcript355.chrX.nnic	NA	24073648	24074632	Gene ID= novel_gene_chrX_356 TPM= 4.83 Transcript Type= NA
chrX	24149058	24150138	24149058	24150138	-	transcript370.chrX.nnic@NA	transcript370.chrX.nnic	NA	24149058	24150138	Gene ID= novel_gene_chrX_371 TPM= 4.83 Transcript Type= NA
chrX	24149283	24209002	24149283	24209002	+	transcript360.chrX.nic@ZFX	transcript360.chrX.nic	protein_coding	24149283,24151691,24152720,24172715,24173607,24179183,24207326,24207712,24208218,24208900	24149794,24151800,24152830,24172800,24173723,24179770,24207475,24207855,24208370,24209002	Gene ID= ENSG00000005889.15 TPM= 2.9 Transcript Type= NA
chrX	24149283	24209002	24149283	24209002	+	transcript363.chrX.nic@ZFX	transcript363.chrX.nic	protein_coding	24149283,24151691,24152720,24172715,24179183,24207326,24207712,24208218,24208900	24149794,24151800,24152830,24172800,24179770,24207475,24207855,24208370,24209002	Gene ID= ENSG00000005889.15 TPM= 3.86 Transcript Type= NA
chrX	24149276	24214402	24149276	24214402	+	transcript364.chrX.nic@ZFX	transcript364.chrX.nic	protein_coding	24149276,24172715,24179183,24207326,24207712,24208218,24208900,24210193	24149794,24172800,24179770,24207475,24207855,24208370,24209040,24214402	Gene ID= ENSG00000005889.15 TPM= 8.69 Transcript Type= NA
chrX	25003694	25015948	25003694	25015948	-	ENST00000379044.4@ARX	ENST00000379044.4	protein_coding	25015542,25012922,25010260,25007111,25003694	25015948,25013798,25010305,25007439,25004910	Gene ID= ENSG00000004848.7 TPM= 5.79 Transcript Type= protein_coding
chrX	28587399	29956723	28587399	29956723	+	ENST00000378993.5@IL1RAPL1	ENST00000378993.5	protein_coding	28587399,28789320,29282938,29396258,29399155,29668430,29917464,29919949,29941651,29954522,29955102	28588047,28789425,29283217,29396444,29399308,29668504,29917596,29920094,29941794,29954692,29956723	Gene ID= ENSG00000169306.9 TPM= 2.9 Transcript Type= protein_coding
chrX	32573528	33211552	32573528	33211552	-	transcript391.chrX.nic@DMD	transcript391.chrX.nic	protein_coding	33211282,33020139,32849728,32844783,32823295,32816468,32809493,32699112,32697870,32644964,32644132,32614303,32595757,32573745,32573528	33211552,33020200,32849820,32844860,32823387,32816640,32809611,32699293,32697998,32645152,32644313,32614453,32595876,32573846,32573637	Gene ID= ENSG00000198947.15 TPM= 6.27 Transcript Type= NA
chrX	33209130	33211487	33209130	33211487	-	transcript397.chrX.nnic@NA	transcript397.chrX.nnic	NA	33209130	33211487	Gene ID= novel_gene_chrX_398 TPM= 1.93 Transcript Type= NA
chrX	34627064	34657288	34627064	34657288	-	ENST00000275954.3@TMEM47	ENST00000275954.3	protein_coding	34656804,34639247,34627064	34657288,34639387,34630491	Gene ID= ENSG00000147027.3 TPM= 22.2 Transcript Type= protein_coding
chrX	37349275	37457295	37349275	37457295	+	ENST00000378628.8@PRRG1	ENST00000378628.8	protein_coding	37349275,37406209,37425840,37453136	37349395,37406259,37426000,37457295	Gene ID= ENSG00000130962.17 TPM= 3.86 Transcript Type= protein_coding
chrX	37349312	37492702	37349312	37492702	+	transcript404.chrX.nnic@AF241726.2	transcript404.chrX.nnic	protein_coding	37349312,37406209,37425840,37491821	37349395,37406259,37426000,37492702	Gene ID= ENSG00000250349.3 TPM= 3.86 Transcript Type= NA
chrX	37685759	37732130	37685759	37732130	+	ENST00000378616.3@XK	ENST00000378616.3	protein_coding	37685759,37694286,37727636	37686206,37694548,37732130	Gene ID= ENSG00000047597.5 TPM= 6.76 Transcript Type= protein_coding
chrX	37780011	37813461	37780011	37813461	+	ENST00000378588.4@CYBB	ENST00000378588.4	protein_coding	37780011,37782088,37783490,37791975,37793665,37795951,37798955,37801256,37803877,37805006,37806387,37809567,37810791	37780122,37782183,37783600,37792059,37793810,37796141,37799084,37801348,37804130,37805168,37806533,37809691,37813461	Gene ID= ENSG00000165168.7 TPM= 2.9 Transcript Type= protein_coding
chrX	37838836	37847637	37838836	37847637	-	ENST00000378578.8@DYNLT3	ENST00000378578.8	protein_coding	37847481,37846317,37841782,37841028,37838836	37847637,37846358,37841905,37841105,37840651	Gene ID= ENSG00000165169.10 TPM= 23.17 Transcript Type= protein_coding
chrX	38149339	38220899	38149339	38220899	-	ENST00000378533.3@SRPX	ENST00000378533.3	protein_coding	38220696,38178285,38174160,38171881,38164769,38160933,38160017,38156896,38154462,38149339	38220899,38178344,38174351,38172057,38164895,38161054,38160196,38157029,38154583,38149894	Gene ID= ENSG00000101955.14 TPM= 41.03 Transcript Type= protein_coding
chrX	38149336	38220924	38149336	38220924	-	ENST00000544439.5@SRPX	ENST00000544439.5	protein_coding	38220696,38174160,38171881,38164769,38160933,38160017,38156896,38154462,38149336	38220924,38174351,38172057,38164895,38161054,38160196,38157029,38154583,38149894	Gene ID= ENSG00000101955.14 TPM= 5.31 Transcript Type= protein_coding
chrX	38269349	38327553	38269349	38327553	-	transcript420.chrX.nic@RPGR	transcript420.chrX.nic	protein_coding	38327340,38323399,38322853,38321027,38318829,38317316,38310615,38304635,38301247,38298956,38297284,38291393,38290959,38276587,38275089,38273386,38269349	38327553,38323524,38322945,38321089,38318987,38317465,38310773,38304790,38301371,38299141,38297452,38291484,38291024,38276772,38275146,38273477,38269832	Gene ID= ENSG00000156313.12 TPM= 1.93 Transcript Type= NA
chrX	38612585	38688913	38612585	38688913	+	transcript426.chrX.nnic@TSPAN7	transcript426.chrX.nnic	protein_coding	38612585,38641399,38666121,38671376,38674221,38675705,38681204,38687599,38687939	38612666,38641516,38666309,38671450,38674316,38675860,38681287,38687674,38688913	Gene ID= ENSG00000156298.12 TPM= 11 Transcript Type= NA
chrX	38612531	38688913	38612531	38688913	+	transcript429.chrX.nic@TSPAN7	transcript429.chrX.nic	protein_coding	38612531,38666121,38671376,38674221,38675705,38681204,38687599,38687939	38612666,38666309,38671450,38674316,38675860,38681287,38687674,38688913	Gene ID= ENSG00000156298.12 TPM= 41.89 Transcript Type= NA
chrX	38561370	38688913	38561370	38688913	+	ENST00000378482.6@TSPAN7	ENST00000378482.6	protein_coding	38561370,38666121,38671376,38674221,38675705,38681204,38687599,38687939	38561627,38666309,38671450,38674316,38675860,38681287,38687674,38688913	Gene ID= ENSG00000156298.12 TPM= 72.78 Transcript Type= protein_coding
chrX	38666096	38688920	38666096	38688920	+	ENST00000419600.3@TSPAN7	ENST00000419600.3	protein_coding	38666096,38671376,38674221,38675705,38681204,38687599,38687939	38666309,38671450,38674316,38675860,38681287,38687674,38688920	Gene ID= ENSG00000156298.12 TPM= 11.97 Transcript Type= retained_intron
chrX	38801432	38806528	38801432	38806528	+	ENST00000457894.4@MID1IP1	ENST00000457894.4	protein_coding	38801432,38804683	38801487,38806528	Gene ID= ENSG00000165175.15 TPM= 10.62 Transcript Type= protein_coding
chrX	40051248	40097403	40051248	40097403	-	ENST00000378444.8@BCOR	ENST00000378444.8	protein_coding	40097215,40077844,40076454,40072349,40071637,40070973,40064336,40063608,40062746,40062139,40057155,40055368,40054256,40053886,40051248	40097403,40077969,40076532,40075180,40071690,40071159,40064599,40063952,40063071,40062393,40057321,40055513,40054333,40054042,40052400	Gene ID= ENSG00000183337.16 TPM= 7.72 Transcript Type= protein_coding
chrX	40051246	40177329	40051246	40177329	-	ENST00000378455.8@BCOR	ENST00000378455.8	protein_coding	40177007,40077844,40076454,40072349,40070973,40064336,40063608,40062746,40062139,40057155,40055368,40054256,40053886,40051246	40177329,40077969,40076532,40075180,40071159,40064599,40063850,40063071,40062393,40057321,40055513,40054333,40054042,40052400	Gene ID= ENSG00000183337.16 TPM= 5.79 Transcript Type= protein_coding
chrX	40109193	40110060	40109193	40110060	+	transcript443.chrX.nnic@NA	transcript443.chrX.nnic	NA	40109193	40110060	Gene ID= novel_gene_chrX_444 TPM= 1.93 Transcript Type= NA
chrX	40580875	40606848	40580875	40606848	+	ENST00000636580.1@ATP6AP2	ENST00000636580.1	protein_coding	40580875,40588986,40591234,40597249,40597527,40598681,40599592,40600762,40605561	40581102,40589116,40591365,40597344,40597664,40598734,40599741,40600881,40606848	Gene ID= ENSG00000182220.14 TPM= 2.9 Transcript Type= protein_coding
chrX	40580958	40606619	40580958	40606619	+	ENST00000378438.9@ATP6AP2	ENST00000378438.9	protein_coding	40580958,40588986,40591234,40597249,40597527,40598681,40599592,40600762,40605564	40581102,40589116,40591365,40597344,40597664,40598734,40599741,40600881,40606619	Gene ID= ENSG00000182220.14 TPM= 5.79 Transcript Type= protein_coding
chrX	40653872	40664451	40653872	40664451	-	ENST00000433003.1@MED14	ENST00000433003.1	protein_coding	40664307,40662925,40659428,40659227,40654935,40653872	40664451,40663160,40659607,40659334,40655060,40654556	Gene ID= ENSG00000180182.10 TPM= 1.93 Transcript Type= protein_coding
chrX	41085432	41088239	41085432	41088239	-	transcript463.chrX.nnic@NA	transcript463.chrX.nnic	NA	41085432	41088239	Gene ID= novel_gene_chrX_464 TPM= 63.71 Transcript Type= NA
chrX	41333398	41350274	41333398	41350274	+	ENST00000399959.6@DDX3X	ENST00000399959.6	protein_coding	41333398,41337408,41339036,41341484,41342495,41342737,41343216,41343737,41344030,41344239,41345180,41345404,41346229,41346505,41346859,41347312,41347640	41334297,41337465,41339083,41341616,41342653,41342836,41343351,41343822,41344128,41344399,41345324,41345548,41346410,41346622,41347012,41347451,41350274	Gene ID= ENSG00000215301.9 TPM= 45.37 Transcript Type= protein_coding
chrX	41334162	41350209	41334162	41350209	+	transcript472.chrX.nnic@DDX3X	transcript472.chrX.nnic	protein_coding	41334162,41337408,41339036,41341484,41342495,41342737,41343216,41343737,41344030,41344239,41345180,41345404,41346229,41346505,41346859,41347312,41347640	41334297,41337465,41339083,41341616,41342653,41342836,41343351,41343822,41344128,41344564,41345324,41345548,41346410,41346622,41347012,41347451,41350209	Gene ID= ENSG00000215301.9 TPM= 9.65 Transcript Type= NA
chrX	41660101	41923553	41660101	41923553	-	transcript480.chrX.nic@CASK	transcript480.chrX.nic	protein_coding	41922930,41853115,41787178,41745524,41739384,41671428,41665277,41660101	41923553,41853227,41787283,41745601,41739456,41671530,41665452,41660561	Gene ID= ENSG00000147044.20 TPM= 1.93 Transcript Type= NA
chrX	43654907	43746824	43654907	43746824	+	ENST00000542639.5@MAOA	ENST00000542639.5	protein_coding	43654907,43657862,43683513,43693291,43711872,43712705,43728173,43731241,43731694,43732699,43736227,43740681,43741950,43743794,43744109,43744367	43656414,43657969,43683607,43693428,43711976,43712796,43728314,43731390,43731853,43732795,43736280,43740738,43742047,43743905,43744171,43746824	Gene ID= ENSG00000189221.9 TPM= 2.9 Transcript Type= protein_coding
chrX	43656210	43744812	43656210	43744812	+	transcript490.chrX.nnic@MAOA	transcript490.chrX.nnic	protein_coding	43656210,43683513,43693291,43712705,43728173,43731241,43731694,43732699,43736227,43740681,43741950,43743794,43744109,43744367	43656414,43683607,43693428,43712796,43728314,43731390,43731853,43732795,43736280,43740738,43742047,43743905,43744171,43744812	Gene ID= ENSG00000189221.9 TPM= 6.76 Transcript Type= NA
chrX	43656219	43746821	43656219	43746821	+	ENST00000338702.3@MAOA	ENST00000338702.3	protein_coding	43656219,43683513,43693291,43711872,43712705,43728173,43731241,43731694,43732699,43736227,43740681,43741950,43743794,43744109,43744367	43656414,43683607,43693428,43711976,43712796,43728314,43731390,43731853,43732795,43736280,43740738,43742047,43743905,43744171,43746821	Gene ID= ENSG00000189221.9 TPM= 32.82 Transcript Type= protein_coding
chrX	43766611	43882557	43766611	43882557	-	transcript495.chrX.nnic@MAOB	transcript495.chrX.nnic	protein_coding	43882254,43843892,43843670,43838868,43803300,43802172,43797125,43795739,43793419,43781448,43780342,43778682,43775175,43769307,43768654,43766611	43882557,43843934,43843764,43839005,43803404,43802263,43797266,43795888,43793578,43781544,43780395,43778739,43775272,43769418,43768716,43767618	Gene ID= ENSG00000069535.13 TPM= 2.9 Transcript Type= NA
chrX	43766611	43882440	43766611	43882440	-	transcript500.chrX.nnic@MAOB	transcript500.chrX.nnic	protein_coding	43882254,43843670,43803300,43802172,43797125,43795739,43793419,43781448,43780342,43778682,43775175,43769307,43768654,43766611	43882440,43843764,43803404,43802263,43797266,43795888,43793578,43781544,43780395,43778739,43775272,43769418,43768716,43767618	Gene ID= ENSG00000069535.13 TPM= 4.83 Transcript Type= NA
chrX	43766611	43882418	43766611	43882418	-	transcript501.chrX.nnic@MAOB	transcript501.chrX.nnic	protein_coding	43882254,43843670,43838868,43803300,43802172,43797125,43795739,43793419,43781448,43780342,43778682,43775175,43768654,43766611	43882418,43843764,43839005,43803404,43802263,43797266,43795888,43793578,43781544,43780395,43778739,43775272,43768716,43767618	Gene ID= ENSG00000069535.13 TPM= 1.93 Transcript Type= NA
chrX	43835206	43882418	43835206	43882418	-	transcript508.chrX.nnic@MAOB	transcript508.chrX.nnic	protein_coding	43882254,43843670,43838868,43835206	43882418,43843764,43839005,43837993	Gene ID= ENSG00000069535.13 TPM= 4.83 Transcript Type= NA
chrX	43855661	43882516	43855661	43882516	-	transcript509.chrX.nnic@MAOB	transcript509.chrX.nnic	protein_coding	43882254,43855661	43882516,43856006	Gene ID= ENSG00000069535.13 TPM= 11.58 Transcript Type= NA
chrX	43766611	43882447	43766611	43882447	-	ENST00000378069.4@MAOB	ENST00000378069.4	protein_coding	43882254,43843670,43838868,43803300,43802172,43797125,43795739,43793419,43781448,43780342,43778682,43775175,43769307,43768654,43766611	43882447,43843764,43839005,43803404,43802263,43797266,43795888,43793578,43781544,43780395,43778739,43775272,43769418,43768716,43767618	Gene ID= ENSG00000069535.13 TPM= 56.95 Transcript Type= protein_coding
chrX	44523639	44543001	44523639	44543001	-	ENST00000378045.4@FUNDC1	ENST00000378045.4	protein_coding	44542805,44541945,44538467,44527237,44523639	44543001,44542101,44538542,44527365,44524275	Gene ID= ENSG00000069509.5 TPM= 1.93 Transcript Type= protein_coding
chrX	44873160	45079349	44873160	45079349	+	transcript517.chrX.nic@KDM6A	transcript517.chrX.nic	protein_coding	44873160,44873924,44961284,44974666,45010961,45020610,45034931,45037655,45051709,45053829,45059006,45059247,45060609,45061324,45062647,45063422,45069579,45076697,45078400,45079146	44873712,44873987,44961392,44974715,45011019,45020730,45034985,45037689,45051802,45053955,45059104,45059466,45060764,45061419,45062748,45063817,45070357,45076826,45078505,45079349	Gene ID= ENSG00000147050.14 TPM= 3.86 Transcript Type= NA
chrX	44875565	44876631	44875565	44876631	-	transcript521.chrX.nnic@NA	transcript521.chrX.nnic	NA	44875565	44876631	Gene ID= novel_gene_chrX_522 TPM= 1.93 Transcript Type= NA
chrX	45148374	45200901	45148374	45200901	-	ENST00000398000.6@CXorf36	ENST00000398000.6	protein_coding	45200594,45191751,45157715,45153910,45148374	45200901,45192015,45157888,45154198,45151992	Gene ID= ENSG00000147113.16 TPM= 5.79 Transcript Type= protein_coding
chrX	46446857	46474639	46446857	46474639	+	ENST00000344302.8@KRBOX4	ENST00000344302.8	protein_coding	46446857,46448200,46450431,46462748,46463198,46472750	46447346,46448310,46450475,46462874,46463308,46474639	Gene ID= ENSG00000147121.15 TPM= 2.9 Transcript Type= protein_coding
chrX	46545493	46548408	46545493	46548408	+	ENST00000421685.2@ZNF674-AS1	ENST00000421685.2	lincRNA	46545493,46546466	46545627,46548408	Gene ID= ENSG00000230844.2 TPM= 5.79 Transcript Type= lincRNA
chrX	46573784	46598408	46573784	46598408	+	ENST00000276055.3@CHST7	ENST00000276055.3	protein_coding	46573784,46597760	46575423,46598408	Gene ID= ENSG00000147119.3 TPM= 8.69 Transcript Type= protein_coding
chrX	46599252	46759172	46599252	46759172	-	ENST00000616978.4@SLC9A7	ENST00000616978.4	protein_coding	46758705,46682336,46679678,46672551,46669607,46662538,46662016,46653609,46651316,46651110,46648686,46643236,46635589,46631586,46620977,46613289,46599252	46759172,46682535,46679755,46672627,46669719,46662643,46662157,46653714,46651404,46651223,46648797,46643389,46635648,46631649,46621059,46613394,46607203	Gene ID= ENSG00000065923.9 TPM= 3.86 Transcript Type= protein_coding
chrX	46836940	46882358	46836940	46882358	+	ENST00000218340.3@RP2	ENST00000218340.3	protein_coding	46836940,46853476,46859988,46877505,46879686	46837202,46854141,46860102,46877590,46882358	Gene ID= ENSG00000102218.5 TPM= 1.93 Transcript Type= protein_coding
chrX	47078355	47093314	47078355	47093314	+	ENST00000397180.5@RGN	ENST00000397180.5	protein_coding	47078355,47080317,47081130,47084418,47089776,47091678,47092061,47092897	47078709,47080936,47081307,47084600,47089991,47091809,47092215,47093314	Gene ID= ENSG00000130988.12 TPM= 4.83 Transcript Type= protein_coding
chrX	47078380	47093313	47078380	47093313	+	ENST00000352078.8@RGN	ENST00000352078.8	protein_coding	47078380,47081130,47084418,47089776,47091678,47092061,47092897	47078709,47081307,47084600,47089991,47091809,47092215,47093313	Gene ID= ENSG00000130988.12 TPM= 6.76 Transcript Type= protein_coding
chrX	47142216	47145504	47142216	47145504	-	ENST00000377811.3@NDUFB11	ENST00000377811.3	protein_coding	47144473,47142614,47142216	47145504,47142744,47142440	Gene ID= ENSG00000147123.10 TPM= 106.18 Transcript Type= protein_coding
chrX	47142220	47145038	47142220	47145038	-	ENST00000276062.8@NDUFB11	ENST00000276062.8	protein_coding	47144473,47142584,47142220	47145038,47142744,47142440	Gene ID= ENSG00000147123.10 TPM= 42.47 Transcript Type= protein_coding
chrX	47145259	47186811	47145259	47186811	+	transcript559.chrX.nic@RBM10	transcript559.chrX.nic	protein_coding	47145259,47147357,47169315,47171028,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474	47145485,47147498,47169498,47171258,47173197,47175092,47176586,47179163,47179495,47180037,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186811	Gene ID= ENSG00000182872.15 TPM= 10.59 Transcript Type= NA
chrX	47145251	47186811	47145251	47186811	+	transcript561.chrX.nic@RBM10	transcript561.chrX.nic	protein_coding	47145251,47147357,47169315,47171028,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474	47145516,47147498,47169498,47171258,47173197,47175092,47176586,47179163,47179495,47180037,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186811	Gene ID= ENSG00000182872.15 TPM= 7.69 Transcript Type= NA
chrX	47144869	47186811	47144869	47186811	+	ENST00000377604.7@RBM10	ENST00000377604.7	protein_coding	47144869,47147357,47169315,47171028,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474	47145485,47147498,47169498,47171258,47173197,47175092,47176586,47179163,47179495,47180040,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186811	Gene ID= ENSG00000182872.15 TPM= 19.28 Transcript Type= protein_coding
chrX	47145279	47186813	47145279	47186813	+	ENST00000628161.2@RBM10	ENST00000628161.2	protein_coding	47145279,47147357,47169315,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474	47145485,47147498,47169498,47173197,47175092,47176586,47179163,47179495,47180037,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186813	Gene ID= ENSG00000182872.15 TPM= 12.04 Transcript Type= protein_coding
chrX	47145279	47186813	47145279	47186813	+	ENST00000345781.10@RBM10	ENST00000345781.10	protein_coding	47145279,47147357,47169315,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474	47145485,47147498,47169498,47173197,47175092,47176586,47179163,47179495,47180040,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186813	Gene ID= ENSG00000182872.15 TPM= 6.25 Transcript Type= protein_coding
chrX	47193828	47215128	47193828	47215128	+	transcript572.chrX.nnic@UBA1	transcript572.chrX.nnic	protein_coding	47193828,47196947,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47194024,47197024,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 22.2 Transcript Type= NA
chrX	47190861	47215128	47190861	47215128	+	ENST00000377351.8@UBA1	ENST00000377351.8	protein_coding	47190861,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47190950,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 21.24 Transcript Type= protein_coding
chrX	47193842	47215128	47193842	47215128	+	ENST00000335972.10@UBA1	ENST00000335972.10	protein_coding	47193842,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47194024,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 104.25 Transcript Type= protein_coding
chrX	47218688	47229997	47218688	47229997	+	ENST00000357227.8@CDK16	ENST00000357227.8	protein_coding	47218688,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47228731	47219105,47223759,47224518,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229997	Gene ID= ENSG00000102225.15 TPM= 41.99 Transcript Type= protein_coding
chrX	47232690	47248328	47232690	47248328	+	ENST00000377107.6@USP11	ENST00000377107.6	protein_coding	47232690,47239070,47239351,47239790,47240305,47240587,47240774,47241277,47241541,47242082,47242439,47242626,47243396,47244498,47244682,47245016,47245370,47247072,47247304,47247611,47247793	47233219,47239179,47239481,47239907,47240450,47240648,47240876,47241450,47241699,47242306,47242522,47242720,47243602,47244550,47244924,47245086,47245482,47247221,47247419,47247699,47248328	Gene ID= ENSG00000102226.9 TPM= 12.55 Transcript Type= protein_coding
chrX	47233421	47248328	47233421	47248328	+	transcript619.chrX.nic@USP11	transcript619.chrX.nic	protein_coding	47233421,47239070,47239351,47239790,47240305,47240587,47240774,47241277,47241541,47242082,47242439,47242626,47243396,47244498,47244682,47245016,47245370,47247072,47247304,47247611,47247793	47233533,47239179,47239481,47239907,47240450,47240648,47240876,47241450,47241699,47242306,47242522,47242720,47243602,47244550,47244924,47245086,47245482,47247221,47247419,47247699,47248328	Gene ID= ENSG00000102226.9 TPM= 8.21 Transcript Type= NA
chrX	47482835	47484783	47482835	47484783	+	transcript636.chrX.nnic@NA	transcript636.chrX.nnic	NA	47482835	47484783	Gene ID= novel_gene_chrX_637 TPM= 3.86 Transcript Type= NA
chrX	47561117	47571900	47561117	47571900	+	ENST00000377045.8@ARAF	ENST00000377045.8	protein_coding	47561117,47562909,47563226,47564797,47564985,47565252,47566639,47566884,47566986,47567230,47568718,47568987,47569539,47569893,47570878,47571323	47561251,47563063,47563329,47564899,47565139,47565350,47566780,47566911,47567131,47567432,47568894,47569033,47569657,47570024,47571012,47571900	Gene ID= ENSG00000078061.12 TPM= 134.18 Transcript Type= protein_coding
chrX	47561222	47565975	47561222	47565975	+	ENST00000377039.2@ARAF	ENST00000377039.2	protein_coding	47561222,47562909,47563226,47564797,47564985,47565252	47561251,47563063,47563329,47564899,47565139,47565975	Gene ID= ENSG00000078061.12 TPM= 1.93 Transcript Type= protein_coding
chrX	47582313	47586789	47582313	47586789	+	ENST00000218388.8@TIMP1	ENST00000218388.8	protein_coding	47582313,47583408,47584936,47585205,47585543,47586521	47582474,47583536,47585015,47585331,47585667,47586789	Gene ID= ENSG00000102265.11 TPM= 27.99 Transcript Type= protein_coding
chrX	47624214	47629965	47624214	47629965	-	ENST00000396992.7@CFP	ENST00000396992.7	protein_coding	47629769,47629524,47628102,47627471,47627141,47626773,47626328,47626058,47624214	47629965,47629674,47628277,47627641,47627332,47626946,47626519,47626169,47624440	Gene ID= ENSG00000126759.13 TPM= 4.83 Transcript Type= protein_coding
chrX	47651801	47659182	47651801	47659182	-	transcript650.chrX.nnic@UXT	transcript650.chrX.nnic	protein_coding	47659115,47658830,47657782,47657572,47657205,47652081,47651801	47659182,47658936,47657863,47657639,47657290,47652144,47651895	Gene ID= ENSG00000126756.11 TPM= 4.18 Transcript Type= NA
chrX	47651798	47659161	47651798	47659161	-	ENST00000333119.7@UXT	ENST00000333119.7	protein_coding	47659115,47658830,47657782,47657572,47657183,47652081,47651798	47659161,47658936,47657863,47657639,47657290,47652144,47651895	Gene ID= ENSG00000126756.11 TPM= 34.1 Transcript Type= protein_coding
chrX	47651805	47659117	47651805	47659117	-	ENST00000335890.2@UXT	ENST00000335890.2	protein_coding	47658830,47657782,47657572,47657183,47652081,47651805	47659117,47657863,47657639,47657290,47652144,47651895	Gene ID= ENSG00000126756.11 TPM= 4.18 Transcript Type= protein_coding
chrX	47974851	48003989	47974851	48003989	-	transcript661.chrX.nic@ZNF182	transcript661.chrX.nic	protein_coding	48003909,48003508,48002595,47988524,47983285,47982949,47974851	48003989,48003702,48002653,47988617,47983411,47983038,47977797	Gene ID= ENSG00000147118.11 TPM= 2.9 Transcript Type= NA
chrX	47974851	48003955	47974851	48003955	-	ENST00000376943.7@ZNF182	ENST00000376943.7	protein_coding	48003909,48003508,48002595,47983285,47982949,47974851	48003955,48003702,48002653,47983411,47983038,47977797	Gene ID= ENSG00000147118.11 TPM= 3.86 Transcript Type= protein_coding
chrX	47974852	48003978	47974852	48003978	-	ENST00000396965.5@ZNF182	ENST00000396965.5	protein_coding	48003904,48003508,48002595,47988524,47983285,47982949,47974852	48003978,48003702,48002653,47988617,47983411,47983038,47977797	Gene ID= ENSG00000147118.11 TPM= 2.9 Transcript Type= protein_coding
chrX	48476161	48486299	48476161	48486299	+	ENST00000019019.6@FTSJ1	ENST00000019019.6	protein_coding	48476161,48476563,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482409,48482597,48482986,48485736	48476396,48476668,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48482794,48483027,48486299	Gene ID= ENSG00000068438.14 TPM= 4.83 Transcript Type= protein_coding
chrX	48476161	48486305	48476161	48486305	+	ENST00000348411.2@FTSJ1	ENST00000348411.2	protein_coding	48476161,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482403,48482597,48482986,48485736	48476396,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48482794,48483027,48486305	Gene ID= ENSG00000068438.14 TPM= 24.13 Transcript Type= protein_coding
chrX	48476290	48482954	48476290	48482954	+	transcript672.chrX.nic@FTSJ1	transcript672.chrX.nic	protein_coding	48476290,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482403,48482597	48476396,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48482954	Gene ID= ENSG00000068438.14 TPM= 1.93 Transcript Type= NA
chrX	48508975	48520808	48508975	48520808	+	transcript678.chrX.nic@PORCN	transcript678.chrX.nic	protein_coding	48508975,48509424,48511295,48511892,48512326,48512589,48512835,48514127,48514240,48514525,48515717,48515890,48516061,48517183,48520375	48509103,48509956,48511487,48511935,48512507,48512719,48512852,48514141,48514365,48514625,48515793,48515953,48516146,48517293,48520808	Gene ID= ENSG00000102312.21 TPM= 11.58 Transcript Type= NA
chrX	48521158	48528716	48521158	48528716	+	ENST00000495186.5@EBP	ENST00000495186.5	protein_coding	48521158,48523699,48526989,48527155,48528234	48521907,48524072,48527025,48527285,48528716	Gene ID= ENSG00000147155.10 TPM= 2.9 Transcript Type= protein_coding
chrX	48539457	48562609	48539457	48562609	+	ENST00000376771.8@TBC1D25	ENST00000376771.8	protein_coding	48539457,48541333,48544869,48558897,48559158,48559614	48539920,48541442,48545023,48559024,48559346,48562609	Gene ID= ENSG00000068354.15 TPM= 19.31 Transcript Type= protein_coding
chrX	48539699	48561210	48539699	48561210	+	transcript695.chrX.nnic@TBC1D25	transcript695.chrX.nnic	protein_coding	48539699,48541333,48544869,48559158,48559614	48539920,48541442,48545023,48559346,48561210	Gene ID= ENSG00000068354.15 TPM= 5.79 Transcript Type= NA
chrX	48574509	48578284	48574509	48578284	+	transcript705.chrX.nic@RBM3	transcript705.chrX.nic	protein_coding	48574509,48575168,48575561,48576508,48577026,48577465	48574573,48575283,48576419,48576604,48577109,48578284	Gene ID= ENSG00000102317.17 TPM= 9.65 Transcript Type= NA
chrX	48597478	48608867	48597478	48608867	+	ENST00000376729.9@WDR13	ENST00000376729.9	protein_coding	48597478,48597958,48598717,48599353,48599587,48600319,48601784,48602065,48604272,48604848	48597614,48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48608867	Gene ID= ENSG00000101940.17 TPM= 69.5 Transcript Type= protein_coding
chrX	48597475	48605193	48597475	48605193	+	transcript716.chrX.nic@WDR13	transcript716.chrX.nic	protein_coding	48597475,48597958,48598751,48599353,48599587,48600319,48601784,48602065,48604272,48604848	48597614,48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605193	Gene ID= ENSG00000101940.17 TPM= 16.02 Transcript Type= NA
chrX	48597492	48605193	48597492	48605193	+	ENST00000218056.9@WDR13	ENST00000218056.9	protein_coding	48597492,48598717,48599353,48599587,48600319,48601784,48602065,48604272,48604848	48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605193	Gene ID= ENSG00000101940.17 TPM= 66.22 Transcript Type= protein_coding
chrX	48801995	48824976	48801995	48824976	+	ENST00000334136.9@HDAC6	ENST00000334136.9	protein_coding	48801995,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802142,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 10.14 Transcript Type= protein_coding
chrX	48802169	48824976	48802169	48824976	+	transcript745.chrX.nic@HDAC6	transcript745.chrX.nic	protein_coding	48802169,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802272,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 11.1 Transcript Type= NA
chrX	48817117	48824976	48817117	48824976	+	transcript750.chrX.nic@HDAC6	transcript750.chrX.nic	protein_coding	48817117,48822620,48822912,48823672,48823922,48824166,48824544	48818109,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 4.34 Transcript Type= NA
chrX	48819447	48824976	48819447	48824976	+	ENST00000488543.1@HDAC6	ENST00000488543.1	protein_coding	48819447,48822620,48822912,48823672,48823922,48824166,48824544	48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 6.27 Transcript Type= retained_intron
chrX	48893449	48897789	48893449	48897789	-	transcript767.chrX.nnic@TIMM17B	transcript767.chrX.nnic	protein_coding	48897724,48894097,48893900,48893449	48897789,48894225,48894010,48893817	Gene ID= ENSG00000126768.12 TPM= 8.21 Transcript Type= NA
chrX	48893453	48897790	48893453	48897790	-	ENST00000495490.6@TIMM17B	ENST00000495490.6	protein_coding	48897724,48896759,48895352,48895038,48894097,48893900,48893453	48897790,48896858,48895454,48895101,48894225,48894010,48893817	Gene ID= ENSG00000126768.12 TPM= 7.24 Transcript Type= protein_coding
chrX	48897912	48903142	48897912	48903142	+	ENST00000376563.5@PQBP1	ENST00000376563.5	protein_coding	48897912,48898492,48901190,48901930,48902233,48902732,48902928	48898093,48898576,48901301,48902042,48902517,48902795,48903142	Gene ID= ENSG00000102103.15 TPM= 30.89 Transcript Type= protein_coding
chrX	48897912	48903142	48897912	48903142	+	ENST00000376566.8@PQBP1	ENST00000376566.8	protein_coding	48897912,48898492,48901190,48901930,48902732,48902928	48898082,48898576,48901301,48902042,48902795,48903142	Gene ID= ENSG00000102103.15 TPM= 1.93 Transcript Type= protein_coding
chrX	48897952	48903143	48897952	48903143	+	ENST00000477997.5@PQBP1	ENST00000477997.5	protein_coding	48897952,48898492,48901190,48901930,48902233,48902732,48902928	48898014,48898576,48901301,48902042,48902517,48902795,48903143	Gene ID= ENSG00000102103.15 TPM= 3.38 Transcript Type= processed_transcript
chrX	48897940	48903142	48897940	48903142	+	ENST00000247140.8@PQBP1	ENST00000247140.8	protein_coding	48897940,48898492,48901190,48901930,48902732,48902928	48898014,48898576,48901301,48902042,48902795,48903142	Gene ID= ENSG00000102103.15 TPM= 1.93 Transcript Type= protein_coding
chrX	48898041	48903143	48898041	48903143	+	ENST00000474671.5@PQBP1	ENST00000474671.5	protein_coding	48898041,48898492,48901190,48901930,48902233,48902732,48902928	48898082,48898576,48901301,48902042,48902517,48902795,48903143	Gene ID= ENSG00000102103.15 TPM= 1.45 Transcript Type= processed_transcript
chrX	48903184	48911958	48903184	48911958	-	ENST00000376521.6@SLC35A2	ENST00000376521.6	protein_coding	48911546,48909814,48906392,48903184	48911958,48909996,48906543,48905482	Gene ID= ENSG00000102100.15 TPM= 3.86 Transcript Type= protein_coding
chrX	48903184	48911646	48903184	48911646	-	ENST00000376529.8@SLC35A2	ENST00000376529.8	protein_coding	48911546,48909814,48906392,48904746,48903184	48911646,48909996,48906543,48904892,48903465	Gene ID= ENSG00000102100.15 TPM= 4.83 Transcript Type= protein_coding
chrX	48922212	48957599	48922212	48957599	-	ENST00000376488.7@OTUD5	ENST00000376488.7	protein_coding	48956977,48944190,48934954,48934711,48934464,48925847,48923851,48923633,48922212	48957599,48944283,48935018,48934867,48934612,48926050,48924052,48923746,48923295	Gene ID= ENSG00000068308.13 TPM= 24.13 Transcript Type= protein_coding
chrX	48973723	49002264	48973723	49002264	-	ENST00000376423.8@GRIPAP1	ENST00000376423.8	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48976018,48975155,48973723	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48975309,48974285	Gene ID= ENSG00000068400.13 TPM= 20.51 Transcript Type= protein_coding
chrX	48973723	49002264	48973723	49002264	-	transcript781.chrX.nic@GRIPAP1	transcript781.chrX.nic	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48975155,48973723	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48974285	Gene ID= ENSG00000068400.13 TPM= 4.1 Transcript Type= NA
chrX	48973723	49002264	48973723	49002264	-	transcript785.chrX.nic@GRIPAP1	transcript785.chrX.nic	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48975155,48973723	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48974285	Gene ID= ENSG00000068400.13 TPM= 4.1 Transcript Type= NA
chrX	49028731	49043486	49028731	49043486	-	ENST00000315869.7@TFE3	ENST00000315869.7	protein_coding	49043111,49040455,49039107,49038197,49038010,49034134,49033726,49033465,49031397,49028731	49043486,49040568,49039410,49038442,49038114,49034251,49033782,49033540,49031544,49030601	Gene ID= ENSG00000068323.16 TPM= 34.75 Transcript Type= protein_coding
chrX	49028726	49043410	49028726	49043410	-	ENST00000493583.5@TFE3	ENST00000493583.5	protein_coding	49043111,49040455,49039107,49038197,49038010,49034134,49033726,49033465,49031397,49028726	49043410,49040568,49039345,49038442,49038114,49034251,49033782,49033540,49031544,49030601	Gene ID= ENSG00000068323.16 TPM= 28.96 Transcript Type= nonsense_mediated_decay
chrX	49071156	49074071	49071156	49074071	-	ENST00000553851.2@PRAF2	ENST00000553851.2	protein_coding	49073809,49072433,49071156	49074071,49072650,49072008	Gene ID= ENSG00000243279.3 TPM= 1.93 Transcript Type= protein_coding
chrX	49074429	49079915	49074429	49079915	-	ENST00000376372.8@WDR45	ENST00000376372.8	protein_coding	49079751,49078041,49077837,49077643,49076645,49076430,49075866,49075545,49075364,49075136,49074429	49079915,49078112,49077911,49077747,49076750,49076524,49075945,49075753,49075465,49075281,49074912	Gene ID= ENSG00000196998.17 TPM= 23.65 Transcript Type= protein_coding
chrX	49074640	49079911	49074640	49079911	-	transcript817.chrX.nic@WDR45	transcript817.chrX.nic	protein_coding	49079751,49078041,49077837,49077643,49076645,49076430,49075866,49075545,49075364,49074640	49079911,49078112,49077911,49077747,49076750,49076524,49075945,49075753,49075465,49074912	Gene ID= ENSG00000196998.17 TPM= 3.38 Transcript Type= NA
chrX	49074658	49079911	49074658	49079911	-	ENST00000485908.6@WDR45	ENST00000485908.6	protein_coding	49079751,49078041,49077837,49076645,49076430,49075866,49075545,49075364,49075136,49074658	49079911,49078112,49077911,49076750,49076524,49075945,49075753,49075465,49075281,49074912	Gene ID= ENSG00000196998.17 TPM= 9.65 Transcript Type= protein_coding
chrX	49102612	49102702	49102612	49102702	-	transcript825.chrX.nnic@NA	transcript825.chrX.nnic	NA	49102612	49102702	Gene ID= novel_gene_chrX_826 TPM= 1.93 Transcript Type= NA
chrX	49106559	49107502	49106559	49107502	+	transcript837.chrX.nnic@NA	transcript837.chrX.nnic	NA	49106559	49107502	Gene ID= novel_gene_chrX_838 TPM= 4.83 Transcript Type= NA
chrX	49113389	49123801	49113389	49123801	-	ENST00000156109.6@GPKOW	ENST00000156109.6	protein_coding	49123547,49122622,49122398,49119705,49117597,49117030,49116221,49115891,49115726,49113853,49113389	49123801,49122776,49122522,49119814,49117810,49117162,49116323,49116014,49115795,49113938,49113755	Gene ID= ENSG00000068394.10 TPM= 43.44 Transcript Type= protein_coding
chrX	49162850	49166632	49162850	49166632	+	transcript831.chrX.nic@MAGIX	transcript831.chrX.nic	protein_coding	49162850,49163783,49164707,49164908,49165190,49166089	49162938,49163929,49164789,49165090,49165361,49166632	Gene ID= ENSG00000269313.5 TPM= 3.86 Transcript Type= NA
chrX	49171926	49175239	49171926	49175239	+	ENST00000376327.5@PLP2	ENST00000376327.5	protein_coding	49171926,49173129,49173388,49174335,49174672	49172096,49173281,49173483,49174425,49175239	Gene ID= ENSG00000102007.10 TPM= 2.9 Transcript Type= protein_coding
chrX	49175554	49186310	49175554	49186310	-	transcript839.chrX.nnic@PRICKLE3	transcript839.chrX.nnic	protein_coding	49186256,49184826,49184625,49183734,49179693,49179251,49178272,49177993,49176903,49175554	49186310,49184844,49184712,49183917,49179806,49179388,49178475,49178179,49177202,49176265	Gene ID= ENSG00000012211.12 TPM= 2.41 Transcript Type= NA
chrX	49175554	49186392	49175554	49186392	-	ENST00000599218.5@PRICKLE3	ENST00000599218.5	protein_coding	49186256,49184625,49183734,49179693,49179251,49178272,49177993,49176903,49175554	49186392,49184710,49183917,49179806,49179388,49178475,49178179,49177202,49176265	Gene ID= ENSG00000012211.12 TPM= 5.31 Transcript Type= protein_coding
chrX	49187804	49200259	49187804	49200259	-	ENST00000263233.8@SYP	ENST00000263233.8	protein_coding	49200151,49198968,49197715,49194166,49193272,49191433,49187804	49200259,49199033,49197839,49194361,49193463,49191763,49189282	Gene ID= ENSG00000102003.10 TPM= 2.9 Transcript Type= protein_coding
chrX	49235453	49250526	49235453	49250526	+	transcript856.chrX.nnic@CCDC22	transcript856.chrX.nnic	protein_coding	49235453,49237086,49241011,49242016,49243118,49243284,49246731,49247496,49247649,49248191,49248407,49248633,49248817,49249167,49249509,49249651,49250148	49235686,49237263,49241108,49242992,49243184,49243462,49246925,49247558,49247768,49248310,49248523,49248734,49248924,49249262,49249568,49249725,49250526	Gene ID= ENSG00000101997.12 TPM= 1.93 Transcript Type= NA
chrX	49235467	49250526	49235467	49250526	+	ENST00000376227.3@CCDC22	ENST00000376227.3	protein_coding	49235467,49237086,49242016,49242886,49243118,49243284,49246731,49247496,49247649,49248191,49248407,49248633,49248817,49249167,49249509,49249651,49250148	49235686,49237263,49242148,49242992,49243184,49243462,49246925,49247558,49247768,49248310,49248523,49248734,49248924,49249262,49249568,49249725,49250526	Gene ID= ENSG00000101997.12 TPM= 29.92 Transcript Type= protein_coding
chrX	49269834	49287510	49269834	49287510	+	transcript862.chrX.nnic@PPP1R3F	transcript862.chrX.nnic	protein_coding	49269834,49278882,49281406,49281981,49285834	49270873,49278941,49281461,49282063,49287510	Gene ID= ENSG00000049769.12 TPM= 3.38 Transcript Type= NA
chrX	49269854	49288095	49269854	49288095	+	ENST00000055335.10@PPP1R3F	ENST00000055335.10	protein_coding	49269854,49281406,49281981,49285834	49270873,49281461,49282063,49288095	Gene ID= ENSG00000049769.12 TPM= 18.82 Transcript Type= protein_coding
chrX	49922765	50093075	49922765	50093075	+	transcript868.chrX.nnic@CLCN5	transcript868.chrX.nnic	protein_coding	49922765,49923407,49925171,49972450,50042316,50054440,50067325,50069879,50072489,50075795,50080594,50081641,50085980,50086328,50088698,50090116,50090670,50092129	49922792,49923482,49925314,49972548,50042462,50054633,50067760,50070030,50072588,50075982,50080716,50081847,50086060,50086870,50088884,50090514,50090886,50093075	Gene ID= ENSG00000171365.15 TPM= 1.93 Transcript Type= NA
chrX	51743431	51746232	51743431	51746232	+	ENST00000340438.5@GSPT2	ENST00000340438.5	protein_coding	51743431	51746232	Gene ID= ENSG00000189369.8 TPM= 2.9 Transcript Type= protein_coding
chrX	51803007	51902354	51803007	51902354	+	ENST00000375772.7@MAGED1	ENST00000375772.7	protein_coding	51803007,51894269,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553,51902146	51803117,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51901938,51902354	Gene ID= ENSG00000179222.17 TPM= 9.17 Transcript Type= protein_coding
chrX	51893602	51902357	51893602	51902357	+	ENST00000326587.11@MAGED1	ENST00000326587.11	protein_coding	51893602,51894269,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553,51902146	51893755,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51901938,51902357	Gene ID= ENSG00000179222.17 TPM= 17.86 Transcript Type= protein_coding
chrX	52898550	52908560	52898550	52908560	+	ENST00000416841.6@FAM156B	ENST00000416841.6	protein_coding	52898550,52900568,52907109	52899541,52900660,52908560	Gene ID= ENSG00000179304.16 TPM= 5.79 Transcript Type= protein_coding
chrX	52923965	52930788	52923965	52930788	+	transcript882.chrX.nnic@NA	transcript882.chrX.nnic	NA	52923965,52929002	52924192,52930788	Gene ID= novel_gene_chrX_883 TPM= 1.93 Transcript Type= NA
chrX	52947254	52958484	52947254	52958484	-	ENST00000622447.4@FAM156A	ENST00000622447.4	protein_coding	52956273,52955154,52947254	52958484,52955246,52948705	Gene ID= ENSG00000268350.7 TPM= 5.79 Transcript Type= protein_coding
chrX	53082359	53088540	53082359	53088540	+	transcript885.chrX.nnic@TSPYL2	transcript885.chrX.nnic	protein_coding	53082359,53083066,53084545,53084755,53084954,53085227,53085631,53087776	53082561,53083305,53084622,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 4.63 Transcript Type= NA
chrX	53082243	53088540	53082243	53088540	+	transcript886.chrX.nic@TSPYL2	transcript886.chrX.nic	protein_coding	53082243,53084532,53084755,53084954,53085227,53085631,53087776	53083305,53084622,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 7.53 Transcript Type= NA
chrX	53082367	53088540	53082367	53088540	+	transcript888.chrX.nic@TSPYL2	transcript888.chrX.nic	protein_coding	53082367,53084532,53084954,53085227,53085631,53087776	53083305,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 4.63 Transcript Type= NA
chrX	53082341	53085290	53082341	53085290	+	transcript891.chrX.nic@TSPYL2	transcript891.chrX.nic	protein_coding	53082341,53084545,53084755,53084954,53085227	53083305,53084622,53084866,53085099,53085290	Gene ID= ENSG00000184205.14 TPM= 4.83 Transcript Type= NA
chrX	53082367	53088540	53082367	53088540	+	ENST00000375442.8@TSPYL2	ENST00000375442.8	protein_coding	53082367,53084545,53084755,53084954,53085227,53085631,53087776	53083305,53084622,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 106.96 Transcript Type= protein_coding
chrX	53192152	53225422	53192152	53225422	-	ENST00000375401.7@KDM5C	ENST00000375401.7	protein_coding	53224740,53220839,53218276,53217796,53217143,53216074,53215795,53214689,53211787,53211497,53210676,53210414,53201854,53201550,53198977,53198764,53198490,53197771,53196686,53195916,53195231,53194931,53194139,53193773,53193437,53192152	53225422,53220916,53218398,53217966,53217277,53216197,53215976,53214847,53211906,53211655,53210857,53210576,53201973,53201744,53199158,53198888,53198637,53197876,53197044,53196054,53195410,53195068,53194738,53193851,53193636,53193332	Gene ID= ENSG00000126012.11 TPM= 30.89 Transcript Type= protein_coding
chrX	53266328	53321417	53266328	53321417	-	transcript899.chrX.nic@IQSEC2	transcript899.chrX.nic	protein_coding	53320417,53291895,53279564,53266328	53321417,53291924,53279659,53267064	Gene ID= ENSG00000124313.13 TPM= 19.31 Transcript Type= NA
chrX	53234110	53281614	53234110	53281614	-	ENST00000375365.2@IQSEC2	ENST00000375365.2	protein_coding	53281496,53279564,53255800,53254530,53250279,53248721,53248114,53246969,53243332,53241784,53239195,53238145,53236322,53234110	53281614,53279659,53256061,53254931,53251174,53248882,53248236,53247135,53243471,53241909,53239294,53238306,53236495,53235184	Gene ID= ENSG00000124313.13 TPM= 4.83 Transcript Type= protein_coding
chrX	53266328	53281598	53266328	53281598	-	ENST00000639161.1@IQSEC2	ENST00000639161.1	protein_coding	53281496,53279564,53266328	53281598,53279659,53267064	Gene ID= ENSG00000124313.13 TPM= 29.92 Transcript Type= protein_coding
chrX	53374149	53422728	53374149	53422728	-	ENST00000322213.8@SMC1A	ENST00000322213.8	protein_coding	53422492,53414981,53414758,53413232,53412900,53411995,53411761,53409421,53409062,53405771,53405493,53405245,53405012,53403777,53403566,53399589,53396472,53396227,53394778,53383097,53382506,53382232,53381018,53380620,53374149	53422728,53415169,53414870,53413435,53413138,53412253,53411901,53409503,53409269,53405956,53405672,53405391,53405149,53403893,53403672,53399730,53396617,53396380,53394888,53383253,53382660,53382383,53381087,53380730,53380186	Gene ID= ENSG00000072501.17 TPM= 6.76 Transcript Type= protein_coding
chrX	53431258	53434370	53431258	53434370	-	transcript912.chrX.nic@HSD17B10	transcript912.chrX.nic	protein_coding	53434319,53433722,53432247,53431974,53431258	53434370,53433886,53432411,53432116,53431594	Gene ID= ENSG00000072506.12 TPM= 3.21 Transcript Type= NA
chrX	53431258	53434373	53431258	53434373	-	ENST00000168216.10@HSD17B10	ENST00000168216.10	protein_coding	53434319,53433722,53432247,53431988,53431798,53431258	53434373,53433886,53432411,53432116,53431906,53431594	Gene ID= ENSG00000072506.12 TPM= 38.93 Transcript Type= protein_coding
chrX	53431263	53434350	53431263	53434350	-	ENST00000375298.4@HSD17B10	ENST00000375298.4	protein_coding	53434319,53433722,53432247,53431988,53431263	53434350,53433886,53432411,53432116,53431594	Gene ID= ENSG00000072506.12 TPM= 3.21 Transcript Type= protein_coding
chrX	53532096	53549505	53532096	53549505	-	ENST00000426907.5@HUWE1	ENST00000426907.5	protein_coding	53548959,53547673,53546704,53546436,53545029,53544560,53543886,53542443,53539657,53538835,53538337,53537556,53536380,53536147,53535384,53534516,53534007,53532096	53549505,53548273,53546825,53546592,53545161,53544762,53543968,53542539,53539812,53539080,53538454,53537696,53536667,53536252,53535501,53534697,53534197,53533411	Gene ID= ENSG00000086758.15 TPM= 1.45 Transcript Type= protein_coding
chrX	53532096	53684169	53532096	53684169	-	ENST00000342160.7@HUWE1	ENST00000342160.7	protein_coding	53683874,53680049,53654063,53648212,53647368,53645311,53634236,53632487,53631567,53631414,53630935,53629516,53628752,53628493,53627739,53627410,53625157,53624595,53617340,53616970,53615744,53614534,53608852,53607523,53604589,53603368,53602564,53600118,53595187,53594499,53593364,53592398,53591000,53590404,53589547,53588382,53586782,53586490,53585012,53584186,53583558,53580831,53576900,53575643,53575155,53573750,53569616,53568692,53565067,53564574,53563746,53562831,53562111,53561756,53560188,53559354,53558971,53558655,53557382,53554633,53552638,53552311,53551266,53550901,53550666,53548959,53547673,53546704,53546436,53545029,53544560,53543841,53542443,53539657,53538835,53538337,53537556,53536380,53536147,53535384,53534516,53534007,53532096	53684169,53680186,53654131,53648310,53647574,53645463,53634298,53632564,53631614,53631482,53631034,53629616,53628902,53628620,53627879,53627515,53625258,53624675,53617446,53617147,53615835,53614745,53608909,53607699,53604834,53603501,53602658,53600309,53595403,53594621,53593601,53592628,53591122,53590499,53589816,53588534,53586909,53586571,53585188,53584345,53583916,53581026,53577067,53575788,53575221,53573964,53569827,53568874,53565239,53564722,53563821,53562929,53562244,53561924,53560416,53559532,53559060,53558809,53557427,53554920,53552893,53552441,53551480,53551189,53550768,53549505,53548273,53546825,53546592,53545161,53544762,53543968,53542539,53539812,53539080,53538454,53537696,53536667,53536252,53535501,53534697,53534197,53533411	Gene ID= ENSG00000086758.15 TPM= 23.65 Transcript Type= protein_coding
chrX	54068324	54183255	54068324	54183255	-	ENST00000375180.6@FAM120C	ENST00000375180.6	protein_coding	54182500,54159370,54157689,54151245,54136491,54135528,54134831,54133773,54132692,54116545,54091312,54087755,54085715,54081322,54080232,54068324	54183255,54159616,54157771,54151373,54136590,54135604,54135111,54134046,54132863,54116794,54091426,54087964,54085916,54081460,54080289,54073287	Gene ID= ENSG00000184083.11 TPM= 1.93 Transcript Type= protein_coding
chrX	54173789	54183281	54173789	54183281	-	ENST00000477084.1@FAM120C	ENST00000477084.1	protein_coding	54182500,54173789	54183281,54174146	Gene ID= ENSG00000184083.11 TPM= 4.83 Transcript Type= protein_coding
chrX	54440401	54445487	54440401	54445487	+	ENST00000375151.4@TSR2	ENST00000375151.4	protein_coding	54440401,54440690,54443400,54444008,54444416	54440502,54440780,54443491,54444184,54445487	Gene ID= ENSG00000158526.7 TPM= 55.99 Transcript Type= protein_coding
chrX	54440404	54445487	54440404	54445487	+	transcript932.chrX.nnic@TSR2	transcript932.chrX.nnic	protein_coding	54440404,54443400,54444008,54444416	54440502,54443491,54444184,54445487	Gene ID= ENSG00000158526.7 TPM= 4.83 Transcript Type= NA
chrX	54445454	54496166	54445454	54496166	-	ENST00000375135.3@FGD1	ENST00000375135.3	protein_coding	54495126,54471314,54470583,54470016,54468787,54467784,54465696,54465451,54456509,54456220,54455692,54455448,54450271,54449659,54449143,54448806,54447311,54445454	54496166,54471487,54470760,54470457,54468876,54467932,54465852,54465589,54456567,54456366,54455784,54455527,54450301,54449760,54449268,54448967,54447454,54446414	Gene ID= ENSG00000102302.7 TPM= 1.93 Transcript Type= protein_coding
chrX	54446980	54448030	54446980	54448030	+	transcript934.chrX.nnic@NA	transcript934.chrX.nnic	NA	54446980	54448030	Gene ID= novel_gene_chrX_935 TPM= 1.93 Transcript Type= NA
chrX	54530211	54561071	54530211	54561071	+	ENST00000336470.8@GNL3L	ENST00000336470.8	protein_coding	54530211,54532520,54539040,54540135,54541273,54542955,54543207,54544223,54548229,54550963,54551568,54551832,54552292,54554565,54558436,54560520	54530302,54532585,54539101,54540242,54541389,54543038,54543342,54544326,54548373,54551050,54551742,54551974,54552428,54554692,54558655,54561071	Gene ID= ENSG00000130119.15 TPM= 11.58 Transcript Type= protein_coding
chrX	54530242	54560763	54530242	54560763	+	ENST00000360845.2@GNL3L	ENST00000360845.2	protein_coding	54530242,54532520,54539040,54540135,54541273,54542955,54543207,54544223,54548229,54550963,54551568,54551832,54552292,54554565,54558436,54560520	54530419,54532585,54539101,54540242,54541389,54543038,54543342,54544326,54548373,54551050,54551742,54551974,54552428,54554692,54558655,54560763	Gene ID= ENSG00000130119.15 TPM= 2.9 Transcript Type= protein_coding
chrX	54560660	54562627	54560660	54562627	+	transcript943.chrX.nnic@NA	transcript943.chrX.nnic	NA	54560660	54562627	Gene ID= novel_gene_chrX_944 TPM= 9.65 Transcript Type= NA
chrX	54564404	54566477	54564404	54566477	-	transcript945.chrX.nnic@NA	transcript945.chrX.nnic	NA	54564404	54566477	Gene ID= novel_gene_chrX_946 TPM= 5.79 Transcript Type= NA
chrX	54747131	54816012	54747131	54816012	+	transcript953.chrX.nnic@MAGED2	transcript953.chrX.nnic	protein_coding	54747131,54788470,54806657,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248,54815881	54747342,54788603,54806747,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54815690,54816012	Gene ID= ENSG00000102316.16 TPM= 8.52 Transcript Type= NA
chrX	54747135	54816007	54747135	54816007	+	transcript955.chrX.nnic@MAGED2	transcript955.chrX.nnic	protein_coding	54747135,54786466,54788470,54806657,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248	54747342,54786558,54788603,54806747,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54816007	Gene ID= ENSG00000102316.16 TPM= 3.86 Transcript Type= NA
chrX	54807710	54816012	54807710	54816012	+	transcript964.chrX.nic@MAGED2	transcript964.chrX.nic	protein_coding	54807710,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54814661,54815248,54815881	54807802,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813550,54814775,54815690,54816012	Gene ID= ENSG00000102316.16 TPM= 3.21 Transcript Type= NA
chrX	54808357	54816012	54808357	54816012	+	transcript966.chrX.nic@MAGED2	transcript966.chrX.nic	protein_coding	54808357,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54814661,54815248,54815881	54808433,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813550,54814775,54815690,54816012	Gene ID= ENSG00000102316.16 TPM= 2.73 Transcript Type= NA
chrX	54808371	54816007	54808371	54816007	+	ENST00000375058.5@MAGED2	ENST00000375058.5	protein_coding	54808371,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248,54815881	54808433,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54815690,54816007	Gene ID= ENSG00000102316.16 TPM= 18.34 Transcript Type= protein_coding
chrX	54928015	54931877	54928015	54931877	-	transcript978.chrX.nnic@NA	transcript978.chrX.nnic	NA	54928015	54931877	Gene ID= novel_gene_chrX_979 TPM= 16.41 Transcript Type= NA
chrX	54931610	54932599	54931610	54932599	+	transcript976.chrX.nnic@NA	transcript976.chrX.nnic	NA	54931610	54932599	Gene ID= novel_gene_chrX_977 TPM= 1.93 Transcript Type= NA
chrX	55143107	55161187	55143107	55161187	-	transcript987.chrX.nic@FAM104B	transcript987.chrX.nic	protein_coding	55161137,55159129,55143107	55161187,55159228,55146311	Gene ID= ENSG00000182518.13 TPM= 1.93 Transcript Type= NA
chrX	55145245	55161195	55145245	55161195	-	ENST00000425133.2@FAM104B	ENST00000425133.2	protein_coding	55161137,55159126,55145245	55161195,55159228,55146311	Gene ID= ENSG00000182518.13 TPM= 2.9 Transcript Type= protein_coding
chrX	55452105	55453566	55452105	55453566	+	ENST00000342972.2@MAGEH1	ENST00000342972.2	protein_coding	55452105	55453566	Gene ID= ENSG00000187601.4 TPM= 3.86 Transcript Type= protein_coding
chrX	55717742	55758774	55717742	55758774	+	transcript998.chrX.nic@RRAGB	transcript998.chrX.nic	protein_coding	55717742,55719314,55722186,55729294,55731364,55751101,55753392,55755841,55757216,55758246	55717788,55719347,55722285,55729360,55731586,55751196,55753514,55755932,55757331,55758774	Gene ID= ENSG00000083750.12 TPM= 2.9 Transcript Type= NA
chrX	55717729	55758774	55717729	55758774	+	transcript999.chrX.nnic@RRAGB	transcript999.chrX.nnic	protein_coding	55717729,55719314,55722186,55729294,55731364,55751101,55753392,55757216,55758246	55718419,55719347,55722285,55729360,55731586,55751196,55753514,55757331,55758774	Gene ID= ENSG00000083750.12 TPM= 2.9 Transcript Type= NA
chrX	55717739	55758774	55717739	55758774	+	ENST00000374941.8@RRAGB	ENST00000374941.8	protein_coding	55717739,55719314,55722186,55729294,55731364,55751101,55753392,55755841,55757216,55758246	55718419,55719347,55722285,55729360,55731586,55751196,55753514,55755932,55757331,55758774	Gene ID= ENSG00000083750.12 TPM= 9.65 Transcript Type= protein_coding
chrX	56563585	56566932	56563585	56566932	+	transcript1003.chrX.nnic@NA	transcript1003.chrX.nnic	NA	56563585	56566932	Gene ID= novel_gene_chrX_1004 TPM= 94.6 Transcript Type= NA
chrX	57119683	57121546	57119683	57121546	-	ENST00000333933.3@SPIN2B	ENST00000333933.3	protein_coding	57121238,57119683	57121546,57120631	Gene ID= ENSG00000186787.8 TPM= 2.9 Transcript Type= protein_coding
chrX	57119682	57121491	57119682	57121491	-	ENST00000275988.5@SPIN2B	ENST00000275988.5	protein_coding	57121293,57119682	57121491,57120634	Gene ID= ENSG00000186787.8 TPM= 3.86 Transcript Type= protein_coding
chrX	57592070	57654615	57592070	57654615	+	transcript1016.chrX.nnic@ZXDB	transcript1016.chrX.nnic	protein_coding	57592070,57640790,57654090	57594454,57640893,57654615	Gene ID= ENSG00000198455.4 TPM= 1.93 Transcript Type= NA
chrX	57906708	57910820	57906708	57910820	-	ENST00000358697.5@ZXDA	ENST00000358697.5	protein_coding	57906708	57910820	Gene ID= ENSG00000198205.6 TPM= 2.9 Transcript Type= protein_coding
chrX	63426560	63561059	63426560	63561059	-	transcript1024.chrX.nnic@LINC01278	transcript1024.chrX.nnic	processed_transcript	63560832,63432364,63426560	63561059,63432491,63426996	Gene ID= ENSG00000235437.7 TPM= 1.93 Transcript Type= NA
chrX	64224196	64230631	64224196	64230631	-	ENST00000362002.2@ASB12	ENST00000362002.2	protein_coding	64230463,64224828,64224196	64230631,64225674,64224468	Gene ID= ENSG00000198881.9 TPM= 82.05 Transcript Type= protein_coding
chrX	65512582	65534803	65512582	65534803	-	transcript1028.chrX.nic@LAS1L	transcript1028.chrX.nic	protein_coding	65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524564,65524056,65523560,65520702,65517987,65514823,65512582	65534803,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524614,65524262,65523707,65520817,65518465,65514973,65512901	Gene ID= ENSG00000001497.16 TPM= 3.21 Transcript Type= NA
chrX	65512582	65534756	65512582	65534756	-	ENST00000374811.7@LAS1L	ENST00000374811.7	protein_coding	65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524564,65524056,65523560,65517987,65514823,65512582	65534756,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524614,65524262,65523707,65518465,65514973,65512901	Gene ID= ENSG00000001497.16 TPM= 18.66 Transcript Type= protein_coding
chrX	65512582	65534754	65512582	65534754	-	ENST00000374807.9@LAS1L	ENST00000374807.9	protein_coding	65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524056,65523560,65517987,65514823,65512582	65534754,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524262,65523707,65518465,65514973,65512901	Gene ID= ENSG00000001497.16 TPM= 10.94 Transcript Type= protein_coding
chrX	65667670	65741931	65667670	65741931	+	ENST00000360270.6@MSN	ENST00000360270.6	protein_coding	65667670,65716818,65727814,65729438,65731107,65731838,65733184,65735267,65736795,65737178,65738525,65738970,65739729	65667853,65716901,65727909,65729712,65731190,65731984,65733280,65735430,65736925,65737338,65738617,65739194,65741931	Gene ID= ENSG00000147065.16 TPM= 57.92 Transcript Type= protein_coding
chrX	66021740	66040125	66021740	66040125	-	ENST00000455586.6@VSIG4	ENST00000455586.6	protein_coding	66039944,66033474,66032468,66028050,66027449,66025025,66021740	66040125,66033830,66032749,66028112,66027526,66025129,66022862	Gene ID= ENSG00000155659.14 TPM= 1.45 Transcript Type= protein_coding
chrX	66021738	66040107	66021738	66040107	-	ENST00000374737.8@VSIG4	ENST00000374737.8	protein_coding	66039944,66033474,66032468,66028050,66027449,66025025,66022841,66021738	66040107,66033830,66032749,66028112,66027526,66025129,66022862,66022500	Gene ID= ENSG00000155659.14 TPM= 6.27 Transcript Type= protein_coding
chrX	67544036	67730619	67544036	67730619	+	ENST00000374690.8@AR	ENST00000374690.8	protein_coding	67544036,67643256,67686010,67711402,67717478,67721833,67722827,67723686	67546762,67643407,67686126,67711689,67717622,67721963,67722984,67730619	Gene ID= ENSG00000169083.16 TPM= 5.79 Transcript Type= protein_coding
chrX	68498323	68537285	68498323	68537285	+	ENST00000462683.5@YIPF6	ENST00000462683.5	protein_coding	68498323,68511849,68513327,68518770,68521372,68522760,68531881	68499123,68511977,68513405,68518812,68521497,68522917,68537285	Gene ID= ENSG00000181704.11 TPM= 7.72 Transcript Type= protein_coding
chrX	68499040	68572464	68499040	68572464	+	transcript1055.chrX.nnic@YIPF6	transcript1055.chrX.nnic	protein_coding	68499040,68511849,68513327,68518770,68521372,68522760,68570984	68499123,68511977,68513405,68518812,68521497,68522917,68572464	Gene ID= ENSG00000181704.11 TPM= 3.86 Transcript Type= NA
chrX	68693638	68725836	68693638	68725836	+	transcript1062.chrX.nnic@STARD8	transcript1062.chrX.nnic	protein_coding	68693638,68712914,68715294,68716368,68717200,68719225,68720264,68720924,68721536,68722047,68722422,68723626,68723945,68724305	68693826,68712985,68715375,68716431,68718629,68719398,68720423,68721122,68721746,68722161,68722646,68723843,68724121,68725836	Gene ID= ENSG00000130052.13 TPM= 10.62 Transcript Type= NA
chrX	68693651	68725833	68693651	68725833	+	ENST00000374597.3@STARD8	ENST00000374597.3	protein_coding	68693651,68712914,68715294,68716368,68717212,68719225,68720264,68720924,68721536,68722047,68722422,68723626,68723945,68724305	68693826,68712985,68715375,68716431,68718629,68719398,68720423,68721122,68721746,68722161,68722646,68723843,68724121,68725833	Gene ID= ENSG00000130052.13 TPM= 18.34 Transcript Type= protein_coding
chrX	68828997	68842147	68828997	68842147	+	ENST00000204961.4@EFNB1	ENST00000204961.4	protein_coding	68828997,68838617,68839664,68839960,68840242	68829904,68838894,68839756,68840088,68842147	Gene ID= ENSG00000090776.5 TPM= 16.41 Transcript Type= protein_coding
chrX	69160891	69165793	69160891	69165793	-	ENST00000374571.4@PJA1	ENST00000374571.4	protein_coding	69165372,69160891	69165793,69163140	Gene ID= ENSG00000181191.11 TPM= 5.79 Transcript Type= protein_coding
chrX	70133436	70166321	70133436	70166321	+	transcript1075.chrX.nnic@IGBP1	transcript1075.chrX.nnic	protein_coding	70133436,70134523,70146633,70148761,70150210,70162346,70165833	70134135,70134816,70146828,70148840,70150322,70162464,70166321	Gene ID= ENSG00000089289.15 TPM= 5.15 Transcript Type= NA
chrX	70133935	70166324	70133935	70166324	+	transcript1076.chrX.nnic@IGBP1	transcript1076.chrX.nnic	protein_coding	70133935,70134523,70146633,70148761,70150196,70165833	70134135,70134816,70146828,70148840,70150322,70166324	Gene ID= ENSG00000089289.15 TPM= 2.25 Transcript Type= NA
chrX	70133449	70166324	70133449	70166324	+	ENST00000342206.10@IGBP1	ENST00000342206.10	protein_coding	70133449,70134523,70146633,70148761,70150210,70165833	70134135,70134816,70146828,70148840,70150322,70166324	Gene ID= ENSG00000089289.15 TPM= 82.37 Transcript Type= protein_coding
chrX	70286595	70289979	70286595	70289979	-	ENST00000239666.8@PDZD11	ENST00000239666.8	protein_coding	70289860,70289255,70288430,70288117,70287732,70287276,70286595	70289979,70289354,70288513,70288173,70287830,70287336,70287116	Gene ID= ENSG00000120509.10 TPM= 24.13 Transcript Type= protein_coding
chrX	70962964	70963293	70962964	70963293	+	ENST00000429775.2@RPS23P8	ENST00000429775.2	processed_pseudogene	70962964	70963293	Gene ID= ENSG00000230629.2 TPM= 1.93 Transcript Type= processed_pseudogene
chrX	71059246	71068423	71059246	71068423	-	ENST00000374274.7@SNX12	ENST00000374274.7	protein_coding	71068142,71062854,71061843,71059246	71068423,71062949,71061967,71061118	Gene ID= ENSG00000147164.11 TPM= 12.55 Transcript Type= protein_coding
chrX	71249204	71254145	71249204	71254145	-	transcript1088.chrX.nic@ZMYM3	transcript1088.chrX.nic	protein_coding	71254029,71252589,71251558,71251178,71250432,71250026,71249204	71254145,71253274,71251601,71251244,71250726,71250203,71249679	Gene ID= ENSG00000147130.14 TPM= 4.83 Transcript Type= NA
chrX	71249201	71254140	71249201	71254140	-	ENST00000373982.5@ZMYM3	ENST00000373982.5	protein_coding	71254029,71252589,71251558,71251178,71250432,71250026,71249201	71254140,71253274,71251601,71251250,71250726,71250203,71249679	Gene ID= ENSG00000147130.14 TPM= 1.93 Transcript Type= protein_coding
chrX	71283583	71301168	71283583	71301168	+	ENST00000276079.12@NONO	ENST00000276079.12	protein_coding	71283583,71284397,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298469,71298707,71299942	71283721,71284453,71290791,71291972,71294528,71296660,71297047,71297461,71297938,71298508,71298816,71301168	Gene ID= ENSG00000147140.15 TPM= 176.65 Transcript Type= protein_coding
chrX	71283633	71301168	71283633	71301168	+	ENST00000373841.5@NONO	ENST00000373841.5	protein_coding	71283633,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298469,71298707,71299942	71283721,71290791,71291972,71294528,71296660,71297047,71297461,71297938,71298508,71298816,71301168	Gene ID= ENSG00000147140.15 TPM= 15.44 Transcript Type= protein_coding
chrX	71301734	71305371	71301734	71305371	+	ENST00000373829.7@ITGB1BP2	ENST00000373829.7	protein_coding	71301734,71302137,71302277,71302411,71303262,71303461,71303627,71303812,71304187,71304542,71304965	71301870,71302186,71302333,71302556,71303356,71303516,71303697,71303911,71304300,71304604,71305371	Gene ID= ENSG00000147166.10 TPM= 1.93 Transcript Type= protein_coding
chrX	71533083	71575897	71533083	71575897	+	ENST00000373719.7@OGT	ENST00000373719.7	protein_coding	71533083,71536178,71537829,71544567,71547907,71554513,71555190,71555954,71556680,71556952,71557195,71557493,71559267,71559588,71561775,71562847,71563130,71563329,71564601,71567500,71567993,71573620	71533336,71536358,71538072,71544635,71548023,71554592,71555385,71556094,71556780,71557105,71557296,71557672,71559425,71559677,71561900,71563017,71563246,71563499,71564753,71567752,71568116,71575897	Gene ID= ENSG00000147162.13 TPM= 12.07 Transcript Type= protein_coding
chrX	71533123	71573816	71533123	71573816	+	ENST00000373701.7@OGT	ENST00000373701.7	protein_coding	71533123,71536208,71537829,71544567,71547907,71554513,71555190,71555954,71556680,71556952,71557195,71557493,71559267,71559588,71561775,71562847,71563130,71563329,71564601,71567500,71567993,71573620	71533336,71536358,71538072,71544635,71548023,71554592,71555385,71556094,71556780,71557105,71557296,71557672,71559425,71559677,71561900,71563017,71563246,71563499,71564753,71567752,71568116,71573816	Gene ID= ENSG00000147162.13 TPM= 1.45 Transcript Type= protein_coding
chrX	71578411	71613583	71578411	71613583	+	ENST00000373696.7@GCNA	ENST00000373696.7	protein_coding	71578411,71580820,71592122,71592537,71594331,71594746,71597950,71603588,71605663,71608973,71610681,71612355,71612862	71578522,71580880,71592168,71592570,71594377,71594779,71598038,71604676,71605729,71609117,71610819,71612559,71613583	Gene ID= ENSG00000147174.11 TPM= 2.9 Transcript Type= protein_coding
chrX	71605526	71613583	71605526	71613583	+	transcript1113.chrX.nic@GCNA	transcript1113.chrX.nic	protein_coding	71605526,71608973,71610681,71612355,71612862	71605729,71609117,71610819,71612559,71613583	Gene ID= ENSG00000147174.11 TPM= 1.93 Transcript Type= NA
chrX	72181679	72198344	72181679	72198344	+	ENST00000373669.6@PIN4	ENST00000373669.6	protein_coding	72181679,72186461,72196785,72197368	72181828,72186534,72196904,72198344	Gene ID= ENSG00000102309.12 TPM= 2.9 Transcript Type= protein_coding
chrX	72578815	72714318	72578815	72714318	-	transcript1136.chrX.nic@PHKA1	transcript1136.chrX.nic	protein_coding	72713803,72712779,72705198,72695708,72684498,72676070,72667375,72666151,72657588,72656120,72653435,72652544,72650390,72644362,72636277,72635155,72626971,72623109,72619214,72618710,72611028,72609624,72605541,72605271,72603119,72602158,72601991,72593104,72584249,72582398,72578815	72714318,72712937,72705245,72695876,72684580,72676150,72667473,72666297,72657641,72656242,72653530,72652651,72650468,72644496,72636386,72635299,72627049,72623275,72619305,72618849,72611184,72609703,72605619,72605400,72603220,72602273,72602029,72593274,72584302,72582598,72581175	Gene ID= ENSG00000067177.14 TPM= 8.19 Transcript Type= NA
chrX	72580627	72714299	72580627	72714299	-	transcript1142.chrX.nnic@PHKA1	transcript1142.chrX.nnic	protein_coding	72714051,72713803,72712779,72705198,72695708,72684498,72676070,72667375,72666151,72657588,72656120,72653435,72652544,72650390,72644362,72636277,72635155,72626971,72623109,72619214,72618710,72611028,72609624,72605541,72605271,72603119,72602158,72593104,72584249,72582398,72580627	72714299,72713941,72712937,72705245,72695876,72684580,72676150,72667473,72666297,72657641,72656242,72653530,72652651,72650468,72644496,72636386,72635299,72627049,72623275,72619305,72618849,72611184,72609703,72605619,72605400,72603220,72602273,72593274,72584302,72582598,72581175	Gene ID= ENSG00000067177.14 TPM= 3.07 Transcript Type= NA
chrX	72683042	72714316	72683042	72714316	-	transcript1163.chrX.nnic@PHKA1	transcript1163.chrX.nnic	protein_coding	72713803,72712779,72705198,72695708,72684498,72684249,72683042	72714316,72712937,72705245,72695876,72684580,72684316,72683410	Gene ID= ENSG00000067177.14 TPM= 2.97 Transcript Type= NA
chrX	72683035	72714294	72683035	72714294	-	transcript1168.chrX.nic@PHKA1	transcript1168.chrX.nic	protein_coding	72713803,72712779,72705198,72695708,72683035	72714294,72712937,72705245,72695876,72684580	Gene ID= ENSG00000067177.14 TPM= 3.94 Transcript Type= NA
chrX	72692942	72714292	72692942	72714292	-	transcript1172.chrX.nic@PHKA1	transcript1172.chrX.nic	protein_coding	72713803,72712779,72705198,72692942	72714292,72712937,72705245,72695876	Gene ID= ENSG00000067177.14 TPM= 2.97 Transcript Type= NA
chrX	72578815	72714181	72578815	72714181	-	ENST00000541944.5@PHKA1	ENST00000541944.5	protein_coding	72713803,72712779,72705198,72695708,72684498,72676070,72667375,72666151,72657588,72656120,72653435,72652544,72650390,72644362,72636277,72635155,72626971,72623109,72619214,72618710,72611028,72609624,72605541,72605271,72603119,72602158,72593104,72584249,72582398,72578815	72714181,72712937,72705245,72695876,72684580,72676150,72667473,72666297,72657641,72656242,72653530,72652651,72650468,72644496,72636386,72635299,72627049,72623275,72619305,72618849,72611184,72609703,72605619,72605400,72603220,72602273,72593274,72584302,72582598,72581175	Gene ID= ENSG00000067177.14 TPM= 2.59 Transcript Type= protein_coding
chrX	72680015	72681811	72680015	72681811	-	transcript1175.chrX.nnic@NA	transcript1175.chrX.nnic	NA	72680015	72681811	Gene ID= novel_gene_chrX_1176 TPM= 2.9 Transcript Type= NA
chrX	73847406	73849507	73847406	73849507	-	transcript1180.chrX.nnic@NA	transcript1180.chrX.nnic	NA	73847406	73849507	Gene ID= novel_gene_chrX_1181 TPM= 2.9 Transcript Type= NA
chrX	73944342	74000491	73944342	74000491	+	ENST00000414209.5@JPX	ENST00000414209.5	lincRNA	73944342,73944584,73946999,73998768,73998954	73944465,73944662,73947374,73998844,74000491	Gene ID= ENSG00000225470.7 TPM= 3.86 Transcript Type= lincRNA
chrX	73949115	73950915	73949115	73950915	+	transcript1191.chrX.nnic@NA	transcript1191.chrX.nnic	NA	73949115	73950915	Gene ID= novel_gene_chrX_1192 TPM= 1.93 Transcript Type= NA
chrX	74590118	74614617	74590118	74614617	-	ENST00000349225.2@RLIM	ENST00000349225.2	protein_coding	74614422,74612582,74595809,74594306,74590118	74614617,74612643,74596000,74594389,74593061	Gene ID= ENSG00000131263.12 TPM= 4.34 Transcript Type= protein_coding
chrX	74585217	74614617	74585217	74614617	-	ENST00000332687.10@RLIM	ENST00000332687.10	protein_coding	74614422,74595809,74594306,74585217	74614617,74596000,74594389,74593061	Gene ID= ENSG00000131263.12 TPM= 2.41 Transcript Type= protein_coding
chrX	75053284	75156280	75053284	75156280	-	ENST00000373394.7@ABCB7	ENST00000373394.7	protein_coding	75156105,75114754,75112886,75098942,75076522,75075362,75073868,75073689,75071509,75070365,75069291,75069007,75065070,75062328,75060223,75053284	75156280,75114831,75112972,75099061,75076654,75075630,75073956,75073776,75071683,75070522,75069454,75069136,75065241,75062431,75060330,75053585	Gene ID= ENSG00000131269.15 TPM= 11.1 Transcript Type= protein_coding
chrX	75053280	75156297	75053280	75156297	-	ENST00000253577.7@ABCB7	ENST00000253577.7	protein_coding	75156105,75114754,75112886,75098942,75076522,75075362,75073868,75073689,75071509,75070365,75069291,75069007,75065070,75062328,75060223,75053280	75156297,75114834,75112972,75099061,75076654,75075630,75073956,75073776,75071683,75070522,75069454,75069136,75065241,75062431,75060330,75053585	Gene ID= ENSG00000131269.15 TPM= 8.21 Transcript Type= protein_coding
chrX	75274088	75304600	75274088	75304600	+	ENST00000373383.8@UPRT	ENST00000373383.8	protein_coding	75274088,75293472,75296342,75297491,75299735,75300867,75303405	75274640,75293514,75296411,75297553,75299896,75300965,75304600	Gene ID= ENSG00000094841.13 TPM= 5.79 Transcript Type= protein_coding
chrX	75739366	75742140	75739366	75742140	-	transcript1221.chrX.nnic@NA	transcript1221.chrX.nnic	NA	75739366	75742140	Gene ID= novel_gene_chrX_1222 TPM= 1.93 Transcript Type= NA
chrX	77681851	77786224	77681851	77786224	-	transcript1253.chrX.nic@ATRX	transcript1253.chrX.nic	protein_coding	77785982,77717131,77698574,77697583,77696577,77688818,77684939,77681851	77786224,77717243,77698629,77697635,77696704,77688924,77685006,77684593	Gene ID= ENSG00000085224.21 TPM= 1.93 Transcript Type= NA
chrX	77826364	77895477	77826364	77895477	-	transcript1262.chrX.nnic@MAGT1	transcript1262.chrX.nnic	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77828551,77826364	77895477,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235,77828036	Gene ID= ENSG00000102158.19 TPM= 4.34 Transcript Type= NA
chrX	77827445	77895477	77827445	77895477	-	transcript1264.chrX.nnic@MAGT1	transcript1264.chrX.nnic	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77828611,77827445	77895477,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235,77828034	Gene ID= ENSG00000102158.19 TPM= 3.21 Transcript Type= NA
chrX	77826364	77895593	77826364	77895593	-	ENST00000358075.10@MAGT1	ENST00000358075.10	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77826364	77895593,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235	Gene ID= ENSG00000102158.19 TPM= 2.41 Transcript Type= protein_coding
chrX	77827461	77895431	77827461	77895431	-	ENST00000618282.4@MAGT1	ENST00000618282.4	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77827461	77895431,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235	Gene ID= ENSG00000102158.19 TPM= 5.15 Transcript Type= protein_coding
chrX	77899438	77907373	77899438	77907373	+	ENST00000481445.1@COX7B	ENST00000481445.1	protein_coding	77899438,77902643,77905184	77899593,77902767,77907373	Gene ID= ENSG00000131174.4 TPM= 267.39 Transcript Type= protein_coding
chrX	77899487	77905385	77899487	77905385	+	transcript1272.chrX.nnic@COX7B	transcript1272.chrX.nnic	protein_coding	77899487,77905184	77899593,77905385	Gene ID= ENSG00000131174.4 TPM= 17.38 Transcript Type= NA
chrX	78104248	78126267	78104248	78126267	+	transcript1277.chrX.nnic@PGK1	transcript1277.chrX.nnic	protein_coding	78104248,78106814,78109867,78113744,78114016,78117312,78118051,78122835,78123195,78124874,78125327,78125790	78104405,78107085,78109917,78113899,78114160,78117415,78118170,78122949,78123374,78125051,78125425,78126267	Gene ID= ENSG00000102144.13 TPM= 67.57 Transcript Type= NA
chrX	78129748	78139706	78129748	78139706	-	ENST00000341864.5@TAF9B	ENST00000341864.5	protein_coding	78139561,78138843,78137962,78137749,78136915,78133338,78129748	78139706,78138924,78138098,78137883,78136990,78133448,78131773	Gene ID= ENSG00000187325.4 TPM= 16.89 Transcript Type= protein_coding
chrX	78129748	78139641	78129748	78139641	-	transcript1292.chrX.nnic@TAF9B	transcript1292.chrX.nnic	protein_coding	78139561,78138843,78137962,78136915,78133338,78129748	78139641,78138924,78138098,78136990,78133448,78131773	Gene ID= ENSG00000187325.4 TPM= 2.41 Transcript Type= NA
chrX	79360388	79367552	79360388	79367552	-	ENST00000434584.2@ITM2A	ENST00000434584.2	protein_coding	79367105,79362942,79362581,79361329,79360388	79367552,79363139,79362691,79361479,79361177	Gene ID= ENSG00000078596.10 TPM= 1.45 Transcript Type= protein_coding
chrX	79360384	79367359	79360384	79367359	-	ENST00000373298.6@ITM2A	ENST00000373298.6	protein_coding	79367105,79363423,79362942,79362581,79361329,79360384	79367359,79363554,79363139,79362691,79361479,79361177	Gene ID= ENSG00000078596.10 TPM= 11.1 Transcript Type= protein_coding
chrX	81201943	81298547	81201943	81298547	+	ENST00000373212.5@SH3BGRL	ENST00000373212.5	protein_coding	81201943,81276984,81278331,81297195	81202245,81277169,81278411,81298547	Gene ID= ENSG00000131171.12 TPM= 9.65 Transcript Type= protein_coding
chrX	85861180	86047562	85861180	86047562	-	ENST00000357749.6@CHM	ENST00000357749.6	protein_coding	86047484,86027491,85981737,85978767,85963665,85958861,85957855,85956153,85911261,85901084,85900646,85894188,85878965,85873052,85861180	86047562,86027557,85981809,85978891,85964052,85958977,85957975,85956378,85911338,85901188,85900709,85894284,85879063,85873212,85864821	Gene ID= ENSG00000188419.13 TPM= 5.79 Transcript Type= protein_coding
chrX	96684778	97469835	96684778	97469835	+	transcript1306.chrX.nic@DIAPH2	transcript1306.chrX.nic	protein_coding	96684778,96735758,96738586,96758154,96763100,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97469694	96685190,96735790,96738762,96758258,96763120,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97469835	Gene ID= ENSG00000147202.17 TPM= 6.27 Transcript Type= NA
chrX	96684712	97469835	96684712	97469835	+	ENST00000373049.8@DIAPH2	ENST00000373049.8	protein_coding	96684712,96735758,96738586,96758154,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97469694	96685190,96735790,96738762,96758258,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97469835	Gene ID= ENSG00000147202.17 TPM= 24.13 Transcript Type= protein_coding
chrX	96684712	97604997	96684712	97604997	+	ENST00000324765.12@DIAPH2	ENST00000324765.12	protein_coding	96684712,96735758,96738586,96758154,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97599253	96685190,96735790,96738762,96758258,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97604997	Gene ID= ENSG00000147202.17 TPM= 5.31 Transcript Type= protein_coding
chrX	96684842	96920479	96684842	96920479	+	transcript1313.chrX.nnic@DIAPH2	transcript1313.chrX.nnic	protein_coding	96684842,96735758,96738586,96758154,96881579,96912328,96912483,96916438,96918509,96919905	96685190,96735790,96738762,96758258,96881718,96912402,96912552,96916574,96918617,96920479	Gene ID= ENSG00000147202.17 TPM= 1.93 Transcript Type= NA
chrX	100674491	100732114	100674491	100732114	-	transcript1323.chrX.nnic@SYTL4	transcript1323.chrX.nnic	protein_coding	100732004,100703093,100701928,100701458,100701220,100700897,100691108,100690563,100690075,100689856,100688351,100687067,100686679,100685990,100681227,100679313,100678391,100674491	100732114,100703185,100702107,100701673,100701329,100700999,100691209,100690638,100690165,100689959,100688443,100687245,100686781,100686151,100681335,100679412,100678599,100676176	Gene ID= ENSG00000102362.15 TPM= 1.93 Transcript Type= NA
chrX	100820401	100840918	100820401	100840918	+	ENST00000372972.6@CSTF2	ENST00000372972.6	protein_coding	100820401,100821527,100822251,100823292,100823886,100824120,100826634,100828040,100831515,100832734,100833180,100837339,100838239,100840714	100820474,100821605,100822420,100823428,100824005,100824257,100826757,100828102,100831656,100832909,100833472,100837449,100838364,100840918	Gene ID= ENSG00000101811.13 TPM= 3.86 Transcript Type= protein_coding
chrX	101009346	101052116	101009346	101052116	-	ENST00000545398.5@TRMT2B	ENST00000545398.5	protein_coding	101051784,101042042,101041317,101037917,101036974,101035613,101023470,101021968,101021101,101020487,101019284,101018971,101009346	101052116,101042312,101041371,101038051,101037073,101035683,101023616,101022062,101021315,101020588,101019403,101019070,101010707	Gene ID= ENSG00000188917.14 TPM= 1.93 Transcript Type= protein_coding
chrX	101390983	101395795	101390983	101395795	+	ENST00000553110.7@RPL36A	ENST00000553110.7	protein_coding	101390983,101391459,101391755,101395335,101395728	101391046,101391564,101391822,101395457,101395795	Gene ID= ENSG00000241343.9 TPM= 4.83 Transcript Type= protein_coding
chrX	101397803	101407925	101397803	101407925	-	ENST00000218516.3@GLA	ENST00000218516.3	protein_coding	101407710,101403811,101401632,101400666,101398785,101398370,101397803	101407925,101403985,101401809,101400757,101398946,101398567,101398099	Gene ID= ENSG00000102393.9 TPM= 2.9 Transcript Type= protein_coding
chrX	101408177	101414133	101408177	101414133	+	transcript1354.chrX.nnic@HNRNPH2	transcript1354.chrX.nnic	protein_coding	101408177,101411936	101408307,101414133	Gene ID= ENSG00000126945.8 TPM= 47.3 Transcript Type= NA
chrX	101408461	101414133	101408461	101414133	+	transcript1356.chrX.nnic@HNRNPH2	transcript1356.chrX.nnic	protein_coding	101408461,101411936	101408516,101414133	Gene ID= ENSG00000126945.8 TPM= 1.93 Transcript Type= NA
chrX	101408295	101414133	101408295	101414133	+	ENST00000316594.5@HNRNPH2	ENST00000316594.5	protein_coding	101408295,101411936	101408319,101414133	Gene ID= ENSG00000126945.8 TPM= 31.86 Transcript Type= protein_coding
chrX	101550531	101554700	101550531	101554700	+	ENST00000372829.7@ARMCX1	ENST00000372829.7	protein_coding	101550531,101550971,101551569,101552809	101550660,101551024,101551633,101554700	Gene ID= ENSG00000126947.12 TPM= 31.86 Transcript Type= protein_coding
chrX	101615120	101618001	101615120	101618001	-	ENST00000361910.8@ARMCX6	ENST00000361910.8	protein_coding	101617885,101617503,101615120	101618001,101617584,101616766	Gene ID= ENSG00000198960.10 TPM= 3.86 Transcript Type= protein_coding
chrX	101623089	101626484	101623089	101626484	+	ENST00000471229.6@ARMCX3	ENST00000471229.6	protein_coding	101623089,101623814,101624158,101624480,101624834	101623276,101623893,101624218,101624550,101626484	Gene ID= ENSG00000102401.19 TPM= 45.69 Transcript Type= protein_coding
chrX	101622797	101627843	101622797	101627843	+	ENST00000341189.8@ARMCX3	ENST00000341189.8	protein_coding	101622797,101623786,101624158,101624480,101624834	101623276,101623893,101624218,101624550,101627843	Gene ID= ENSG00000102401.19 TPM= 14.48 Transcript Type= protein_coding
chrX	101623142	101626484	101623142	101626484	+	transcript1374.chrX.nic@ARMCX3	transcript1374.chrX.nic	protein_coding	101623142,101624158,101624480,101624834	101623893,101624218,101624550,101626484	Gene ID= ENSG00000102401.19 TPM= 7.08 Transcript Type= NA
chrX	101623142	101626484	101623142	101626484	+	transcript1376.chrX.nic@ARMCX3	transcript1376.chrX.nic	protein_coding	101623142,101624158,101624834	101623893,101624550,101626484	Gene ID= ENSG00000102401.19 TPM= 3.21 Transcript Type= NA
chrX	101655281	101658649	101655281	101658649	-	ENST00000330154.6@ARMCX2	ENST00000330154.6	protein_coding	101658492,101658073,101655281	101658649,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 1.93 Transcript Type= protein_coding
chrX	102599168	102604159	102599168	102604159	+	ENST00000246174.6@ARMCX5	ENST00000246174.6	protein_coding	102599168,102599348,102599712,102600920,102601464,102601880	102599266,102599572,102599847,102601032,102601509,102604159	Gene ID= ENSG00000125962.14 TPM= 2.9 Transcript Type= protein_coding
chrX	102599519	102604153	102599519	102604153	+	transcript1391.chrX.nic@ARMCX5-GPRASP2	transcript1391.chrX.nic	processed_transcript	102599519,102599712,102601464,102601880	102599572,102599847,102601509,102604153	Gene ID= ENSG00000271147.7 TPM= 2.9 Transcript Type= NA
chrX	102599526	102604153	102599526	102604153	+	transcript1395.chrX.nnic@ARMCX5-GPRASP2	transcript1395.chrX.nnic	processed_transcript	102599526,102600920,102601464,102601880	102599859,102601032,102601509,102604153	Gene ID= ENSG00000271147.7 TPM= 1.93 Transcript Type= NA
chrX	102712880	102717733	102712880	102717733	+	transcript1398.chrX.nnic@ARMCX5-GPRASP2	transcript1398.chrX.nnic	processed_transcript	102712880,102713782,102714189,102714537	102713006,102713849,102714266,102717733	Gene ID= ENSG00000271147.7 TPM= 8.69 Transcript Type= NA
chrX	102712885	102717733	102712885	102717733	+	transcript1399.chrX.nic@GPRASP2	transcript1399.chrX.nic	protein_coding	102712885,102713782,102714189,102714537	102713217,102713849,102714266,102717733	Gene ID= ENSG00000158301.18 TPM= 5.79 Transcript Type= NA
chrX	103252995	103255203	103252995	103255203	-	ENST00000372685.7@TCEAL8	ENST00000372685.7	protein_coding	103255078,103254605,103252995	103255203,103254677,103254017	Gene ID= ENSG00000180964.16 TPM= 1.93 Transcript Type= protein_coding
chrX	103309346	103311046	103309346	103311046	-	ENST00000372677.7@BEX2	ENST00000372677.7	protein_coding	103310860,103310358,103309346	103311046,103310433,103309981	Gene ID= ENSG00000133134.11 TPM= 1.93 Transcript Type= protein_coding
chrX	103356452	103358451	103356452	103358451	+	ENST00000372661.4@TCEAL9	ENST00000372661.4	protein_coding	103356452,103357083,103357615	103356606,103357161,103358451	Gene ID= ENSG00000185222.8 TPM= 2.9 Transcript Type= protein_coding
chrX	103356452	103358451	103356452	103358451	+	ENST00000372656.4@TCEAL9	ENST00000372656.4	protein_coding	103356452,103357615	103356606,103358451	Gene ID= ENSG00000185222.8 TPM= 1.93 Transcript Type= protein_coding
chrX	103376395	103378077	103376395	103378077	+	ENST00000372645.3@BEX3	ENST00000372645.3	protein_coding	103376395,103377028,103377463	103376613,103377106,103378077	Gene ID= ENSG00000166681.13 TPM= 3.54 Transcript Type= protein_coding
chrX	103376340	103378077	103376340	103378077	+	ENST00000361298.8@BEX3	ENST00000361298.8	protein_coding	103376340,103377028,103377510	103376613,103377106,103378077	Gene ID= ENSG00000166681.13 TPM= 7.89 Transcript Type= protein_coding
chrX	103376916	103378071	103376916	103378071	+	ENST00000372634.1@BEX3	ENST00000372634.1	protein_coding	103376916,103377510	103377106,103378071	Gene ID= ENSG00000166681.13 TPM= 2.09 Transcript Type= protein_coding
chrX	103585492	103587518	103585492	103587518	+	ENST00000468024.5@TCEAL4	ENST00000468024.5	protein_coding	103585492,103586219,103586649	103585683,103586291,103587518	Gene ID= ENSG00000133142.17 TPM= 2.9 Transcript Type= protein_coding
chrX	103585563	103587526	103585563	103587526	+	ENST00000494801.5@TCEAL4	ENST00000494801.5	protein_coding	103585563,103586219,103586654	103585624,103586291,103587526	Gene ID= ENSG00000133142.17 TPM= 32.82 Transcript Type= protein_coding
chrX	103607906	103609927	103607906	103609927	+	ENST00000372627.9@TCEAL3	ENST00000372627.9	protein_coding	103607906,103608604,103609038	103608058,103608673,103609927	Gene ID= ENSG00000196507.10 TPM= 5.79 Transcript Type= protein_coding
chrX	103628974	103630953	103628974	103630953	+	ENST00000372625.7@TCEAL1	ENST00000372625.7	protein_coding	103628974,103629494,103629885	103629025,103629573,103630953	Gene ID= ENSG00000172465.13 TPM= 4.83 Transcript Type= protein_coding
chrX	103628999	103630953	103628999	103630953	+	ENST00000372624.3@TCEAL1	ENST00000372624.3	protein_coding	103628999,103629494,103629885	103629025,103629561,103630953	Gene ID= ENSG00000172465.13 TPM= 3.86 Transcript Type= protein_coding
chrX	103675496	103686717	103675496	103686717	-	transcript1435.chrX.nic@MORF4L2	transcript1435.chrX.nic	protein_coding	103686631,103685171,103684681,103678499,103675496	103686717,103685260,103684729,103678600,103677051	Gene ID= ENSG00000123562.16 TPM= 17.57 Transcript Type= NA
chrX	103675496	103686717	103675496	103686717	-	transcript1444.chrX.nnic@MORF4L2	transcript1444.chrX.nnic	protein_coding	103686631,103685171,103678499,103675496	103686717,103685260,103678620,103677051	Gene ID= ENSG00000123562.16 TPM= 9.85 Transcript Type= NA
chrX	103675500	103686818	103675500	103686818	-	ENST00000422154.6@MORF4L2	ENST00000422154.6	protein_coding	103686631,103685171,103678499,103675500	103686818,103685260,103678651,103677051	Gene ID= ENSG00000123562.16 TPM= 20.95 Transcript Type= protein_coding
chrX	103675500	103688158	103675500	103688158	-	ENST00000433176.6@MORF4L2	ENST00000433176.6	protein_coding	103687989,103685171,103678499,103675500	103688158,103685260,103678651,103677051	Gene ID= ENSG00000123562.16 TPM= 9.36 Transcript Type= protein_coding
chrX	103675500	103686818	103675500	103686818	-	ENST00000451301.5@MORF4L2	ENST00000451301.5	protein_coding	103686631,103685171,103675500	103686818,103685260,103677051	Gene ID= ENSG00000123562.16 TPM= 27.99 Transcript Type= protein_coding
chrX	103675496	103688064	103675496	103688064	-	ENST00000360458.5@MORF4L2	ENST00000360458.5	protein_coding	103687989,103685171,103678499,103675496	103688064,103685260,103678600,103677051	Gene ID= ENSG00000123562.16 TPM= 46.53 Transcript Type= protein_coding
chrX	103822322	103832228	103822322	103832228	-	ENST00000243298.2@RAB9B	ENST00000243298.2	protein_coding	103832060,103827005,103822322	103832228,103827078,103825826	Gene ID= ENSG00000123570.3 TPM= 1.93 Transcript Type= protein_coding
chrX	104130604	104156988	104130604	104156988	-	ENST00000467290.1@SLC25A53	ENST00000467290.1	protein_coding	104156878,104130604	104156988,104131223	Gene ID= ENSG00000269743.2 TPM= 2.9 Transcript Type= processed_transcript
chrX	106168305	106208955	106168305	106208955	+	ENST00000337685.6@MUM1L1	ENST00000337685.6	protein_coding	106168305,106171012,106177224,106203985,106205219	106168425,106171139,106177359,106204170,106208955	Gene ID= ENSG00000157502.13 TPM= 4.83 Transcript Type= protein_coding
chrX	106201736	106208955	106201736	106208955	+	ENST00000372552.1@MUM1L1	ENST00000372552.1	protein_coding	106201736,106203985,106205219	106201769,106204170,106208955	Gene ID= ENSG00000157502.13 TPM= 1.93 Transcript Type= protein_coding
chrX	106726664	106796993	106726664	106796993	+	ENST00000255499.2@RNF128	ENST00000255499.2	protein_coding	106726664,106772913,106785065,106787918,106790186,106791066,106795580	106727397,106773160,106785136,106788000,106790282,106791234,106796993	Gene ID= ENSG00000133135.13 TPM= 16.41 Transcript Type= protein_coding
chrX	106940734	107000244	106940734	107000244	-	ENST00000355610.8@MORC4	ENST00000355610.8	protein_coding	106999868,106999677,106993230,106985983,106985096,106981345,106980891,106978080,106976584,106962012,106958336,106956936,106956480,106954913,106942515,106941938,106940734	107000244,106999749,106993362,106986200,106985243,106981477,106981019,106978199,106976684,106962110,106958464,106957004,106956534,106955088,106943205,106942221,106941632	Gene ID= ENSG00000133131.14 TPM= 9.65 Transcript Type= protein_coding
chrX	107628507	107651026	107628507	107651026	+	ENST00000372435.8@PRPS1	ENST00000372435.8	protein_coding	107628507,107639295,107640902,107642366,107645177,107647606,107649940	107628750,107639478,107641000,107642490,107645350,107647765,107651026	Gene ID= ENSG00000147224.10 TPM= 11.58 Transcript Type= protein_coding
chrX	107713224	107775988	107713224	107775988	-	ENST00000372384.6@TSC22D3	ENST00000372384.6	protein_coding	107775780,107775100,107715899,107713224	107775988,107775511,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 11.18 Transcript Type= protein_coding
chrX	107713221	107775985	107713221	107775985	-	ENST00000315660.8@TSC22D3	ENST00000315660.8	protein_coding	107775780,107775100,107715899,107713221	107775985,107775525,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 12.14 Transcript Type= protein_coding
chrX	107713221	107716545	107713221	107716545	-	ENST00000372390.8@TSC22D3	ENST00000372390.8	protein_coding	107716315,107715899,107713221	107716545,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 9.25 Transcript Type= protein_coding
chrX	107713224	107775787	107713224	107775787	-	ENST00000372383.8@TSC22D3	ENST00000372383.8	protein_coding	107775100,107715899,107713224	107775787,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 36.28 Transcript Type= protein_coding
chrX	107825879	107927193	107825879	107927193	+	ENST00000262843.10@MID2	ENST00000262843.10	protein_coding	107825879,107840670,107854609,107903958,107905478,107916002,107917506,107924343,107926094,107926671	107826430,107841385,107854704,107904065,107905626,107916129,107917739,107924504,107926301,107927193	Gene ID= ENSG00000080561.13 TPM= 4.83 Transcript Type= protein_coding
chrX	108084207	108091618	108084207	108091618	-	ENST00000217958.7@PSMD10	ENST00000217958.7	protein_coding	108091407,108088752,108087953,108087686,108084207	108091618,108088850,108088099,108087852,108085127	Gene ID= ENSG00000101843.18 TPM= 16.41 Transcript Type= protein_coding
chrX	108091668	108154671	108091668	108154671	+	ENST00000372232.7@ATG4A	ENST00000372232.7	protein_coding	108091668,108126077,108128781,108131260,108134057,108134339,108137091,108137804,108138113,108150152,108151802,108152979,108153642	108091836,108126187,108128852,108131358,108134158,108134411,108137170,108137991,108138191,108150297,108151858,108153087,108154671	Gene ID= ENSG00000101844.17 TPM= 22.2 Transcript Type= protein_coding
chrX	109536876	109544690	109536876	109544690	+	ENST00000372106.5@NXT2	ENST00000372106.5	protein_coding	109536876,109538045,109541475,109542507	109537021,109538131,109541619,109544690	Gene ID= ENSG00000101888.11 TPM= 1.93 Transcript Type= protein_coding
chrX	109641337	109733403	109641337	109733403	-	ENST00000348502.10@ACSL4	ENST00000348502.10	protein_coding	109733139,109696144,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641337	109733403,109696196,109683372,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186	Gene ID= ENSG00000068366.19 TPM= 14 Transcript Type= protein_coding
chrX	109641337	109733266	109641337	109733266	-	transcript1530.chrX.nic@ACSL4	transcript1530.chrX.nic	protein_coding	109733139,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641337	109733266,109683666,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186	Gene ID= ENSG00000068366.19 TPM= 2.41 Transcript Type= NA
chrX	110002655	110184251	110002655	110184251	+	transcript1534.chrX.nic@TMEM164	transcript1534.chrX.nic	protein_coding	110002655,110003501,110067347,110109080,110144798,110171420,110173245,110182306	110002772,110004164,110067396,110109146,110144876,110171520,110173453,110184251	Gene ID= ENSG00000157600.11 TPM= 2.9 Transcript Type= NA
chrX	110003127	110006601	110003127	110006601	+	transcript1542.chrX.nnic@NA	transcript1542.chrX.nnic	NA	110003127	110006601	Gene ID= novel_gene_chrX_1543 TPM= 3.86 Transcript Type= NA
chrX	110194186	110318239	110194186	110318239	-	ENST00000262844.9@AMMECR1	ENST00000262844.9	protein_coding	110317599,110264489,110216518,110202446,110200954,110194186	110318239,110264599,110216632,110202536,110201050,110198634	Gene ID= ENSG00000101935.9 TPM= 3.86 Transcript Type= protein_coding
chrX	110316203	110318084	110316203	110318084	-	transcript1546.chrX.nnic@NA	transcript1546.chrX.nnic	NA	110316203	110318084	Gene ID= novel_gene_chrX_1547 TPM= 1.93 Transcript Type= NA
chrX	110673856	110795765	110673856	110795765	-	ENST00000372045.5@CHRDL1	ENST00000372045.5	protein_coding	110795686,110792088,110762695,110759661,110721385,110719835,110700654,110694163,110688594,110681482,110679336,110673856	110795765,110792215,110762807,110759754,110721527,110719928,110700721,110694331,110688803,110681646,110679425,110676361	Gene ID= ENSG00000101938.14 TPM= 1.93 Transcript Type= protein_coding
chrX	112809894	112840834	112809894	112840834	-	transcript1557.chrX.nic@AMOT	transcript1557.chrX.nic	protein_coding	112840452,112832294,112825072,112822255,112815358,112811249,112809894	112840834,112832370,112825220,112823188,112815877,112811393,112809986	Gene ID= ENSG00000126016.15 TPM= 6.76 Transcript Type= NA
chrX	115593608	115650672	115593608	115650672	+	ENST00000539310.5@PLS3	ENST00000539310.5	protein_coding	115593608,115610243,115622246,115629198,115629835,115634000,115634881,115636836,115640408,115643313,115645021,115646072,115646402,115647550,115647893,115649429	115593632,115610323,115622409,115629327,115629967,115634081,115635046,115636978,115640503,115643508,115645099,115646186,115646535,115647673,115648017,115650672	Gene ID= ENSG00000102024.17 TPM= 6.76 Transcript Type= protein_coding
chrX	115732427	115734283	115732427	115734283	+	transcript1566.chrX.nnic@NA	transcript1566.chrX.nnic	NA	115732427	115734283	Gene ID= novel_gene_chrX_1567 TPM= 1.93 Transcript Type= NA
chrX	118346109	118449961	118346109	118449961	+	ENST00000254029.7@WDR44	ENST00000254029.7	protein_coding	118346109,118378419,118387340,118392632,118394055,118395249,118396970,118398387,118404338,118406875,118409489,118410895,118432781,118436702,118441368,118442244,118442565,118443560,118444360,118448893	118346580,118378452,118387414,118393271,118394185,118395344,118397106,118398470,118404444,118407026,118409627,118410959,118432894,118436824,118441559,118442345,118442680,118443687,118444494,118449961	Gene ID= ENSG00000131725.13 TPM= 12.55 Transcript Type= protein_coding
chrX	118727510	118805226	118727510	118805226	+	transcript1578.chrX.nnic@IL13RA1	transcript1578.chrX.nnic	protein_coding	118727510,118741017,118746954,118749658,118758055,118761138,118766530,118766844,118773879,118776427,118804932	118727726,118741156,118747092,118749778,118758242,118761289,118766577,118766976,118773975,118776511,118805226	Gene ID= ENSG00000131724.10 TPM= 1.93 Transcript Type= NA
chrX	118727607	118794539	118727607	118794539	+	transcript1580.chrX.nnic@IL13RA1	transcript1580.chrX.nnic	protein_coding	118727607,118741017,118749658,118758055,118761138,118766530,118766844,118773879,118776427,118791762	118727726,118741156,118749778,118758242,118761289,118766577,118766976,118773975,118776511,118794539	Gene ID= ENSG00000131724.10 TPM= 2.9 Transcript Type= NA
chrX	118727572	118794539	118727572	118794539	+	ENST00000371666.7@IL13RA1	ENST00000371666.7	protein_coding	118727572,118741017,118746954,118749658,118758055,118761138,118766530,118766844,118773879,118776427,118791762	118727726,118741156,118747092,118749778,118758242,118761289,118766577,118766976,118773975,118776511,118794539	Gene ID= ENSG00000131724.10 TPM= 29.92 Transcript Type= protein_coding
chrX	118987446	118991328	118987446	118991328	+	transcript1594.chrX.nic@LONRF3	transcript1594.chrX.nic	protein_coding	118987446,118990470	118989672,118991328	Gene ID= ENSG00000175556.16 TPM= 5.79 Transcript Type= NA
chrX	119019381	119022924	119019381	119022924	+	transcript1595.chrX.nnic@NA	transcript1595.chrX.nnic	NA	119019381	119022924	Gene ID= novel_gene_chrX_1596 TPM= 2.9 Transcript Type= NA
chrX	119236253	119244466	119236253	119244466	+	ENST00000217971.7@PGRMC1	ENST00000217971.7	protein_coding	119236253,119240309,119243151	119236691,119240464,119244466	Gene ID= ENSG00000101856.9 TPM= 15.44 Transcript Type= protein_coding
chrX	119467815	119469092	119467815	119469092	-	transcript1604.chrX.nnic@NA	transcript1604.chrX.nnic	NA	119467815	119469092	Gene ID= novel_gene_chrX_1605 TPM= 4.83 Transcript Type= NA
chrX	119468400	119471319	119468400	119471319	+	ENST00000317881.8@SLC25A5	ENST00000317881.8	protein_coding	119468400,119469661,119470373,119470901	119468626,119470147,119470513,119471319	Gene ID= ENSG00000005022.5 TPM= 68.54 Transcript Type= protein_coding
chrX	119538882	119565395	119538882	119565395	-	transcript1607.chrX.nic@CXorf56	transcript1607.chrX.nic	protein_coding	119565232,119560268,119545463,119544353,119542505,119541328,119538882	119565395,119560385,119545504,119544491,119542594,119541420,119539789	Gene ID= ENSG00000018610.13 TPM= 3.86 Transcript Type= NA
chrX	119574467	119584425	119574467	119584425	+	ENST00000371558.6@UBE2A	ENST00000371558.6	protein_coding	119574467,119574901,119575375,119581507,119582588,119583127	119574755,119574981,119575400,119581596,119582676,119584425	Gene ID= ENSG00000077721.15 TPM= 82.53 Transcript Type= protein_coding
chrX	119574536	119583347	119574536	119583347	+	ENST00000346330.6@UBE2A	ENST00000346330.6	protein_coding	119574536,119574901,119575375,119581507,119582597,119583127	119574755,119574981,119575400,119581596,119582676,119583347	Gene ID= ENSG00000077721.15 TPM= 10.62 Transcript Type= protein_coding
chrX	119617639	119693370	119617639	119693370	-	ENST00000343984.5@SEPT6	ENST00000343984.5	protein_coding	119693076,119675554,119663482,119652854,119649937,119640692,119637027,119633360,119629318,119617639	119693370,119675668,119663677,119653040,119650098,119640788,119637195,119633492,119629508,119618786	Gene ID= ENSG00000125354.22 TPM= 3.86 Transcript Type= protein_coding
chrX	119786506	119791643	119786506	119791643	-	ENST00000361575.3@RPL39	ENST00000361575.3	protein_coding	119791574,119789908,119786506	119791643,119790011,119786732	Gene ID= ENSG00000198918.7 TPM= 374.54 Transcript Type= protein_coding
chrX	119837892	119853005	119837892	119853005	-	transcript1623.chrX.nic@UPF3B	transcript1623.chrX.nic	protein_coding	119852773,119851767,119851495,119845198,119843191,119841735,119841076,119838367,119837892	119853005,119851873,119851601,119845296,119843301,119841778,119841258,119838527,119838051	Gene ID= ENSG00000125351.11 TPM= 2.9 Transcript Type= NA
chrX	119834026	119852998	119834026	119852998	-	ENST00000345865.6@UPF3B	ENST00000345865.6	protein_coding	119852773,119851767,119851495,119845198,119843191,119841735,119841076,119838367,119837757,119834026	119852998,119851873,119851601,119845296,119843301,119841778,119841258,119838527,119838051,119835027	Gene ID= ENSG00000125351.11 TPM= 1.93 Transcript Type= protein_coding
chrX	119870475	119871827	119870475	119871827	-	ENST00000371442.3@RNF113A	ENST00000371442.3	protein_coding	119870475	119871827	Gene ID= ENSG00000125352.5 TPM= 3.86 Transcript Type= protein_coding
chrX	119871487	119876662	119871487	119876662	+	ENST00000371437.4@NDUFA1	ENST00000371437.4	protein_coding	119871487,119873304,119876514	119872013,119873393,119876662	Gene ID= ENSG00000125356.6 TPM= 448.87 Transcript Type= protein_coding
chrX	119934518	119943719	119934518	119943719	-	transcript1633.chrX.nic@NKAP	transcript1633.chrX.nic	protein_coding	119943220,119938730,119936612,119936297,119934518	119943719,119938810,119936682,119936431,119934557	Gene ID= ENSG00000101882.9 TPM= 4.83 Transcript Type= NA
chrX	120250752	120258398	120250752	120258398	+	ENST00000326624.2@ZBTB33	ENST00000326624.2	protein_coding	120250752,120253414	120250977,120258398	Gene ID= ENSG00000177485.6 TPM= 4.83 Transcript Type= protein_coding
chrX	120436494	120469306	120436494	120469306	-	ENST00000371335.4@LAMP2	ENST00000371335.4	protein_coding	120469106,120456651,120455357,120448970,120447841,120446305,120442599,120441730,120436494	120469306,120456769,120455570,120449128,120448025,120446427,120442662,120441894,120439293	Gene ID= ENSG00000005893.15 TPM= 293.14 Transcript Type= protein_coding
chrX	120427827	120469365	120427827	120469365	-	ENST00000434600.6@LAMP2	ENST00000434600.6	protein_coding	120469106,120456651,120455357,120448970,120447841,120446305,120442599,120441730,120427827	120469365,120456769,120455570,120449128,120448025,120446427,120442662,120441894,120428626	Gene ID= ENSG00000005893.15 TPM= 2.58 Transcript Type= protein_coding
chrX	120625793	120630150	120625793	120630150	-	ENST00000304661.5@C1GALT1C1	ENST00000304661.5	protein_coding	120629917,120625793	120630150,120627171	Gene ID= ENSG00000171155.7 TPM= 2.9 Transcript Type= protein_coding
chrX	123621398	123733085	123621398	123733085	-	transcript1679.chrX.nic@THOC2	transcript1679.chrX.nic	protein_coding	123732952,123712850,123706858,123703454,123697681,123696721,123696021,123686548,123671669,123668159,123667106,123665642,123645334,123644779,123644575,123640538,123638934,123638043,123636079,123633953,123632861,123631688,123627693,123626521,123625912,123624541,123624060,123623787,123623105,123622758,123621398	123733085,123712908,123706949,123703505,123697751,123696842,123696154,123686714,123671761,123668314,123667278,123665837,123645375,123644909,123644676,123640622,123639027,123638123,123636175,123634070,123633040,123631852,123627968,123626662,123626069,123624669,123624191,123623971,123623283,123622860,123621587	Gene ID= ENSG00000125676.19 TPM= 3.86 Transcript Type= NA
chrX	123621523	123733085	123621523	123733085	-	transcript1682.chrX.nnic@THOC2	transcript1682.chrX.nnic	protein_coding	123732952,123712850,123706858,123703454,123697681,123696721,123696021,123671669,123668159,123667106,123665642,123645334,123644779,123644575,123640538,123638934,123638043,123636079,123633953,123632861,123631688,123627693,123626521,123625912,123624541,123624060,123623787,123623105,123622758,123621523	123733085,123712908,123706949,123703505,123697751,123696842,123696154,123671761,123668314,123667278,123665837,123645375,123644909,123644676,123640622,123639027,123638123,123636175,123634070,123633040,123631852,123627968,123626662,123626069,123624669,123624191,123623971,123623283,123622860,123621587	Gene ID= ENSG00000125676.19 TPM= 2.9 Transcript Type= NA
chrX	123860027	123913979	123860027	123913979	+	ENST00000371199.7@XIAP	ENST00000371199.7	protein_coding	123860027,123885631,123888619,123891238,123892731,123900493,123906988	123860293,123886539,123888718,123891316,123892773,123900693,123913979	Gene ID= ENSG00000101966.12 TPM= 3.86 Transcript Type= protein_coding
chrX	123959233	123961341	123959233	123961341	-	ENST00000426367.1@AL121601.1	ENST00000426367.1	lincRNA	123961189,123959233	123961341,123959405	Gene ID= ENSG00000232412.1 TPM= 4.83 Transcript Type= lincRNA
chrX	123960553	124100902	123960553	124100902	+	transcript1706.chrX.nic@STAG2	transcript1706.chrX.nic	protein_coding	123960553,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124094018,124095372,124100574	123960866,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124094144,124095449,124100902	Gene ID= ENSG00000101972.18 TPM= 2.9 Transcript Type= NA
chrX	123961703	124025915	123961703	124025915	+	transcript1713.chrX.nic@STAG2	transcript1713.chrX.nic	protein_coding	123961703,124022531,124025840	123961856,124022671,124025915	Gene ID= ENSG00000101972.18 TPM= 2.9 Transcript Type= NA
chrX	123961739	124100902	123961739	124100902	+	ENST00000371144.7@STAG2	ENST00000371144.7	protein_coding	123961739,124021367,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124094018,124095372,124100574	123961856,124021431,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124094144,124095449,124100902	Gene ID= ENSG00000101972.18 TPM= 8.69 Transcript Type= protein_coding
chrX	123961738	124100902	123961738	124100902	+	ENST00000371145.7@STAG2	ENST00000371145.7	protein_coding	123961738,124021367,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124090854,124094018,124095372,124100574	123961856,124021431,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124090964,124094144,124095449,124100902	Gene ID= ENSG00000101972.18 TPM= 1.93 Transcript Type= protein_coding
chrX	129446501	129523489	129446501	129523489	-	transcript1718.chrX.nnic@SMARCA1	transcript1718.chrX.nnic	protein_coding	129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448302,129446501	129523489,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447233	Gene ID= ENSG00000102038.15 TPM= 2.37 Transcript Type= NA
chrX	129446506	129523506	129446506	129523506	-	transcript1725.chrX.nnic@SMARCA1	transcript1725.chrX.nnic	protein_coding	129523197,129518361,129516331,129515894,129515687,129511804,129507941,129504734,129499732,129497845,129496750,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446506	129523506,129518447,129516497,129515994,129515787,129511983,129508096,129504802,129499841,129498071,129496871,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447233	Gene ID= ENSG00000102038.15 TPM= 2.12 Transcript Type= NA
chrX	129446506	129523485	129446506	129523485	-	ENST00000371123.5@SMARCA1	ENST00000371123.5	protein_coding	129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446506	129523485,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447233	Gene ID= ENSG00000102038.15 TPM= 12.98 Transcript Type= protein_coding
chrX	129540227	129592561	129540227	129592561	+	transcript1734.chrX.nnic@OCRL	transcript1734.chrX.nnic	protein_coding	129540227,129540753,129544958,129548563,129557325,129557861,129558633,129558840,129560550,129561179,129562384,129562599,129565772,129567254,129569264,129575140,129575654,129576317,129584344,129587002,129588179,129588886,129589845,129590146	129540478,129540823,129545037,129548601,129557435,129557950,129558753,129559001,129560651,129561293,129562500,129562786,129565883,129567363,129569399,129575250,129575719,129576552,129584367,129587118,129588263,129589013,129589956,129592561	Gene ID= ENSG00000122126.15 TPM= 2.9 Transcript Type= NA
chrX	129540199	129576819	129540199	129576819	+	transcript1740.chrX.nnic@OCRL	transcript1740.chrX.nnic	protein_coding	129540199,129540744,129544958,129548563,129557325,129557861,129558633,129558840,129560550,129561179,129562384,129562599,129565772,129567254,129569264,129575140,129575654,129576317	129540478,129540823,129545037,129548601,129557435,129557950,129558753,129559001,129560651,129561293,129562500,129562786,129565883,129567363,129569399,129575250,129575719,129576819	Gene ID= ENSG00000122126.15 TPM= 1.93 Transcript Type= NA
chrX	129540275	129592561	129540275	129592561	+	ENST00000371113.8@OCRL	ENST00000371113.8	protein_coding	129540275,129540744,129544958,129548563,129557325,129557861,129558633,129558840,129560550,129561179,129562384,129562599,129565772,129567254,129569264,129575140,129575897,129576317,129584344,129587002,129588179,129588886,129589845,129590146	129540478,129540823,129545037,129548601,129557435,129557950,129558753,129559001,129560651,129561293,129562500,129562786,129565883,129567363,129569399,129575250,129576062,129576552,129584367,129587118,129588263,129589013,129589956,129592561	Gene ID= ENSG00000122126.15 TPM= 4.83 Transcript Type= protein_coding
chrX	129906164	129929752	129906164	129929752	+	transcript1750.chrX.nnic@UTP14A	transcript1750.chrX.nnic	protein_coding	129906164,129907367,129908060,129908670,129911008,129911766,129919175,129919395,129920457,129920675,129921194,129924795,129925919,129926240,129929336	129906236,129907442,129908130,129908734,129911150,129911921,129919294,129919489,129920580,129920752,129921587,129925195,129926020,129926339,129929752	Gene ID= ENSG00000156697.12 TPM= 1.93 Transcript Type= NA
chrX	129906183	129929752	129906183	129929752	+	ENST00000394422.7@UTP14A	ENST00000394422.7	protein_coding	129906183,129907367,129908060,129908670,129911008,129911766,129919175,129919395,129920457,129920675,129921194,129924795,129925919,129926240,129929336	129906236,129907442,129908130,129908734,129911150,129911921,129919294,129919489,129920580,129920752,129921587,129925195,129926112,129926339,129929752	Gene ID= ENSG00000156697.12 TPM= 51.16 Transcript Type= protein_coding
chrX	130129362	130165879	130129362	130165879	-	ENST00000319908.7@AIFM1	ENST00000319908.7	protein_coding	130165551,130155156,130149469,130147752,130147493,130145479,130140533,130139795,130138593,130137078,130136643,130136045,130133313,130131675,130129970,130129362	130165879,130155286,130149568,130147876,130147623,130145569,130140617,130139871,130138701,130137185,130136731,130136185,130133455,130131799,130130166,130129628	Gene ID= ENSG00000156709.13 TPM= 20.92 Transcript Type= protein_coding
chrX	130129370	130165887	130129370	130165887	-	ENST00000287295.7@AIFM1	ENST00000287295.7	protein_coding	130165551,130156461,130149469,130147752,130147493,130145479,130140533,130139795,130138593,130137078,130136643,130136045,130133313,130131675,130129970,130129370	130165887,130156603,130149568,130147876,130147623,130145569,130140617,130139871,130138701,130137185,130136731,130136185,130133455,130131799,130130166,130129628	Gene ID= ENSG00000156709.13 TPM= 98.14 Transcript Type= protein_coding
chrX	130165250	130166907	130165250	130166907	+	transcript1764.chrX.nnic@NA	transcript1764.chrX.nnic	NA	130165250	130166907	Gene ID= novel_gene_chrX_1765 TPM= 1.93 Transcript Type= NA
chrX	130339888	130373361	130339888	130373361	+	ENST00000545805.5@SLC25A14	ENST00000545805.5	protein_coding	130339888,130340107,130345182,130346544,130349251,130350646,130358640,130364628,130365541,130371564,130372909	130339976,130340353,130345275,130346691,130349345,130350731,130358735,130364752,130365676,130371644,130373361	Gene ID= ENSG00000102078.15 TPM= 2.9 Transcript Type= protein_coding
chrX	130401951	130411524	130401951	130411524	+	transcript1772.chrX.nic@RBMX2	transcript1772.chrX.nic	protein_coding	130401951,130402255,130403802,130409257,130411348	130402037,130402370,130403853,130409386,130411524	Gene ID= ENSG00000134597.15 TPM= 3.86 Transcript Type= NA
chrX	130401969	130413343	130401969	130413343	+	ENST00000305536.10@RBMX2	ENST00000305536.10	protein_coding	130401969,130402255,130403802,130409257,130411348,130412361	130402037,130402370,130403853,130409386,130411525,130413343	Gene ID= ENSG00000134597.15 TPM= 1.93 Transcript Type= protein_coding
chrX	130623385	130903317	130623385	130903317	-	ENST00000394363.5@ENOX2	ENST00000394363.5	protein_coding	130903049,130901684,130783547,130703120,130688863,130679542,130669965,130667530,130665643,130656581,130637229,130634984,130631468,130627958,130623385	130903317,130901731,130783690,130703254,130689018,130679748,130670198,130667742,130665749,130656695,130637410,130635091,130631576,130628043,130625445	Gene ID= ENSG00000165675.16 TPM= 2.9 Transcript Type= protein_coding
chrX	130898728	130903257	130898728	130903257	-	transcript1781.chrX.nic@ENOX2	transcript1781.chrX.nic	protein_coding	130903049,130898728	130903257,130901731	Gene ID= ENSG00000165675.16 TPM= 2.9 Transcript Type= NA
chrX	132203025	132218124	132203025	132218124	-	ENST00000342983.6@RAP2C	ENST00000342983.6	protein_coding	132217916,132216996,132214134,132203025	132218124,132217806,132214446,132205587	Gene ID= ENSG00000123728.9 TPM= 13.51 Transcript Type= protein_coding
chrX	132709927	132958431	132709927	132958431	-	transcript1791.chrX.nnic@HS6ST2	transcript1791.chrX.nnic	protein_coding	132958175,132956808,132758256,132709927	132958431,132957326,132758332,132710140	Gene ID= ENSG00000171004.18 TPM= 1.93 Transcript Type= NA
chrX	133300103	133415490	133300103	133415490	-	ENST00000370828.3@GPC4	ENST00000370828.3	protein_coding	133414806,133339183,133324145,133311258,133306024,133305772,133304725,133303166,133300103	133415490,133339341,133324536,133311423,133306154,133305918,133304861,133303341,133303069	Gene ID= ENSG00000076716.8 TPM= 11.58 Transcript Type= protein_coding
chrX	134373253	134428790	134373253	134428790	+	ENST00000370803.7@PHF6	ENST00000370803.7	protein_coding	134373253,134377572,134378005,134393501,134393909,134413491,134413823,134415016,134417169,134425201,134425661	134373467,134377755,134378106,134393634,134393952,134413657,134413966,134415120,134417302,134425330,134428790	Gene ID= ENSG00000156531.16 TPM= 4.34 Transcript Type= protein_coding
chrX	134373312	134428789	134373312	134428789	+	ENST00000332070.7@PHF6	ENST00000332070.7	protein_coding	134373312,134377572,134378005,134393501,134393909,134413491,134413823,134415016,134417169,134425201	134373467,134377755,134378106,134393634,134393952,134413657,134413966,134415120,134417302,134428789	Gene ID= ENSG00000156531.16 TPM= 2.9 Transcript Type= protein_coding
chrX	134373312	134428791	134373312	134428791	+	ENST00000625464.2@PHF6	ENST00000625464.2	protein_coding	134373312,134377572,134378005,134393501,134393909,134413488,134413823,134415016,134417169,134425201,134425661	134373467,134377755,134378106,134393634,134393952,134413657,134413966,134415120,134417302,134425330,134428791	Gene ID= ENSG00000156531.16 TPM= 1.45 Transcript Type= protein_coding
chrX	134460153	134500668	134460153	134500668	+	ENST00000298556.7@HPRT1	ENST00000298556.7	protein_coding	134460153,134473359,134475181,134486465,134490188,134493508,134498390,134498608,134500030	134460338,134473465,134475364,134486530,134490205,134493590,134498436,134498684,134500668	Gene ID= ENSG00000165704.14 TPM= 33.79 Transcript Type= protein_coding
chrX	134546973	134547144	134546973	134547144	+	transcript1809.chrX.nnic@NA	transcript1809.chrX.nnic	NA	134546973	134547144	Gene ID= novel_gene_chrX_1810 TPM= 3.86 Transcript Type= NA
chrX	134769567	134797232	134769567	134797232	-	ENST00000298090.10@FAM122B	ENST00000298090.10	protein_coding	134797121,134796108,134793815,134789580,134789223,134789085,134788730,134787472,134785886,134781821,134769567	134797232,134796355,134793893,134789636,134789266,134789139,134788831,134787533,134785947,134781917,134771354	Gene ID= ENSG00000156504.16 TPM= 1.93 Transcript Type= protein_coding
chrX	134887626	134915267	134887626	134915267	-	ENST00000370783.7@MOSPD1	ENST00000370783.7	protein_coding	134915182,134899280,134899090,134896817,134891479,134887626	134915267,134899534,134899165,134897034,134891640,134889192	Gene ID= ENSG00000101928.12 TPM= 4.34 Transcript Type= protein_coding
chrX	134887632	134915252	134887632	134915252	-	transcript1822.chrX.nnic@MOSPD1	transcript1822.chrX.nnic	protein_coding	134915182,134899280,134899069,134896817,134887632	134915252,134899534,134899165,134897034,134889192	Gene ID= ENSG00000101928.12 TPM= 2.41 Transcript Type= NA
chrX	134990938	134992473	134990938	134992473	+	ENST00000330288.5@SMIM10	ENST00000330288.5	protein_coding	134990938	134992473	Gene ID= ENSG00000184785.5 TPM= 1.93 Transcript Type= protein_coding
chrX	135020504	135022529	135020504	135022529	-	ENST00000391440.2@RTL8B	ENST00000391440.2	protein_coding	135020504	135022529	Gene ID= ENSG00000212747.4 TPM= 3.86 Transcript Type= protein_coding
chrX	135021728	135033538	135021728	135033538	+	transcript1829.chrX.nnic@RTL8C	transcript1829.chrX.nnic	protein_coding	135021728,135032912	135021892,135033538	Gene ID= ENSG00000134590.13 TPM= 3.38 Transcript Type= NA
chrX	135032366	135033546	135032366	135033546	+	ENST00000257013.8@RTL8C	ENST00000257013.8	protein_coding	135032366	135033546	Gene ID= ENSG00000134590.13 TPM= 122.11 Transcript Type= protein_coding
chrX	135050932	135052175	135050932	135052175	-	ENST00000370775.2@RTL8A	ENST00000370775.2	protein_coding	135050932	135052175	Gene ID= ENSG00000203950.6 TPM= 17.38 Transcript Type= protein_coding
chrX	135285792	135344028	135285792	135344028	-	transcript1838.chrX.nnic@ZNF75D	transcript1838.chrX.nnic	protein_coding	135341768,135293730,135291009,135285792	135344028,135294258,135291135,135287846	Gene ID= ENSG00000186376.14 TPM= 1.93 Transcript Type= NA
chrX	135344796	135363152	135344796	135363152	+	ENST00000339249.4@ZNF449	ENST00000339249.4	protein_coding	135344796,135347019,135349110,135359892,135360193	135344835,135347472,135349314,135360005,135363152	Gene ID= ENSG00000173275.12 TPM= 4.83 Transcript Type= protein_coding
chrX	135962070	135974063	135962070	135974063	-	ENST00000305963.2@MMGT1	ENST00000305963.2	protein_coding	135973597,135971058,135967390,135962070	135974063,135971110,135967493,135965183	Gene ID= ENSG00000169446.5 TPM= 19.31 Transcript Type= protein_coding
chrX	135985135	136047130	135985135	136047130	+	ENST00000370701.6@SLC9A6	ENST00000370701.6	protein_coding	135985135,135985603,135994786,135998108,135998482,135998856,136002108,136010442,136012949,136013349,136016645,136022586,136024330,136030132,136033414,136040076,136044452	135985477,135985827,135994985,135998185,135998558,135998968,136002213,136010583,136013054,136013437,136016758,136022697,136024483,136030162,136033493,136040181,136047130	Gene ID= ENSG00000198689.10 TPM= 7.72 Transcript Type= protein_coding
chrX	136147616	136211354	136147616	136211354	+	transcript1858.chrX.nic@FHL1	transcript1858.chrX.nic	protein_coding	136147616,136169907,136206407,136207016,136207792,136208455,136209871	136147878,136169980,136206588,136207190,136207961,136208641,136211354	Gene ID= ENSG00000022267.16 TPM= 181.33 Transcript Type= NA
chrX	136169637	136211359	136169637	136211359	+	ENST00000394153.6@FHL1	ENST00000394153.6	protein_coding	136169637,136169907,136206407,136207016,136207792,136208455,136209871	136169733,136169980,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 123.01 Transcript Type= protein_coding
chrX	136196757	136211359	136196757	136211359	+	ENST00000539015.5@FHL1	ENST00000539015.5	protein_coding	136196757,136206407,136207016,136207792,136208455,136209871	136196863,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 124.3 Transcript Type= protein_coding
chrX	136196773	136211359	136196773	136211359	+	ENST00000370683.5@FHL1	ENST00000370683.5	protein_coding	136196773,136206407,136207016,136207792,136208455,136209871	136197134,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 2128.05 Transcript Type= protein_coding
chrX	136147465	136211359	136147465	136211359	+	ENST00000370690.7@FHL1	ENST00000370690.7	protein_coding	136147465,136169907,136206407,136207016,136207792,136208455,136209871	136147628,136169980,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 142.32 Transcript Type= protein_coding
chrX	136167015	136211323	136167015	136211323	+	ENST00000535737.5@FHL1	ENST00000535737.5	protein_coding	136167015,136169907,136206407,136207016,136207792,136208455,136209871	136167098,136169980,136206588,136207190,136207961,136208641,136211323	Gene ID= ENSG00000022267.16 TPM= 5.01 Transcript Type= protein_coding
chrX	136197026	136210067	136197026	136210067	+	ENST00000370676.7@FHL1	ENST00000370676.7	protein_coding	136197026,136206407,136207016,136207792,136209871	136197134,136206588,136207190,136207961,136210067	Gene ID= ENSG00000022267.16 TPM= 1.21 Transcript Type= protein_coding
chrX	136209098	136210620	136209098	136210620	-	transcript1895.chrX.nnic@NA	transcript1895.chrX.nnic	NA	136209098	136210620	Gene ID= novel_gene_chrX_1896 TPM= 24.13 Transcript Type= NA
chrX	136216811	136251579	136216811	136251579	-	ENST00000316077.13@MAP7D3	ENST00000316077.13	protein_coding	136251289,136246243,136246065,136244632,136241160,136240382,136236244,136231544,136230839,136230385,136228623,136227284,136225909,136224827,136222393,136220765,136219593,136219398,136216811	136251579,136246341,136246148,136244795,136241277,136240486,136236339,136232220,136230966,136230593,136228758,136227431,136226013,136224880,136222486,136220963,136219671,136219495,136218493	Gene ID= ENSG00000129680.15 TPM= 17.38 Transcript Type= protein_coding
chrX	136497079	136512342	136497079	136512342	+	ENST00000535601.5@HTATSF1	ENST00000535601.5	protein_coding	136497079,136497624,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808	136497439,136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512342	Gene ID= ENSG00000102241.11 TPM= 137.39 Transcript Type= protein_coding
chrX	136497204	136512346	136497204	136512346	+	transcript1905.chrX.nic@HTATSF1	transcript1905.chrX.nic	protein_coding	136497204,136497676,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808	136497439,136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512346	Gene ID= ENSG00000102241.11 TPM= 25.42 Transcript Type= NA
chrX	136497511	136512346	136497511	136512346	+	ENST00000218364.4@HTATSF1	ENST00000218364.4	protein_coding	136497511,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808	136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512346	Gene ID= ENSG00000102241.11 TPM= 45.69 Transcript Type= protein_coding
chrX	136665547	136782088	136665547	136782088	-	ENST00000250617.6@ARHGEF6	ENST00000250617.6	protein_coding	136780718,136779414,136747508,136745223,136743585,136732102,136713276,136708675,136706908,136690610,136687932,136685677,136682758,136681890,136680731,136679535,136677936,136676624,136675007,136672020,136669482,136665547	136782088,136779497,136747592,136745347,136743786,136732172,136713370,136708770,136707030,136690748,136687991,136685823,136682844,136681968,136680876,136679660,136677956,136676717,136675096,136672119,136669536,136668169	Gene ID= ENSG00000129675.15 TPM= 10.62 Transcript Type= protein_coding
chrX	136869192	136880779	136869192	136880779	-	transcript1927.chrX.nic@RBMX	transcript1927.chrX.nic	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136873246,136872268,136869192	136880779,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136874452,136872345,136870417	Gene ID= ENSG00000147274.14 TPM= 17.38 Transcript Type= NA
chrX	136869192	136880779	136869192	136880779	-	transcript1932.chrX.nic@RBMX	transcript1932.chrX.nic	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136872268,136869192	136880779,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136872345,136870417	Gene ID= ENSG00000147274.14 TPM= 35.07 Transcript Type= NA
chrX	136873461	136880725	136873461	136880725	-	ENST00000320676.11@RBMX	ENST00000320676.11	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136873461	136880725,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136874452	Gene ID= ENSG00000147274.14 TPM= 104.57 Transcript Type= protein_coding
chrX	136867579	136871132	136867579	136871132	+	transcript1937.chrX.nnic@NA	transcript1937.chrX.nnic	NA	136867579	136871132	Gene ID= novel_gene_chrX_1938 TPM= 1.93 Transcript Type= NA
chrX	138631574	138857680	138631574	138857680	-	transcript1941.chrX.nic@FGF13	transcript1941.chrX.nic	protein_coding	138857512,138708818,138702984,138635457,138631574	138857680,138708928,138703087,138635655,138632986	Gene ID= ENSG00000129682.15 TPM= 54.06 Transcript Type= NA
chrX	141175745	141177125	141175745	141177125	-	ENST00000370526.3@LDOC1	ENST00000370526.3	protein_coding	141175745	141177125	Gene ID= ENSG00000182195.7 TPM= 3.86 Transcript Type= protein_coding
chrX	143622790	143634503	143622790	143634503	-	ENST00000596188.2@SLITRK4	ENST00000596188.2	protein_coding	143634328,143622790	143634503,143631158	Gene ID= ENSG00000179542.15 TPM= 4.83 Transcript Type= protein_coding
chrX	143628128	143635204	143628128	143635204	-	ENST00000338017.8@SLITRK4	ENST00000338017.8	protein_coding	143634879,143628128	143635204,143631158	Gene ID= ENSG00000179542.15 TPM= 16.41 Transcript Type= protein_coding
chrX	149476990	149505347	149476990	149505347	-	ENST00000340855.10@IDS	ENST00000340855.10	protein_coding	149505035,149504157,149503312,149500949,149498107,149496346,149490314,149486925,149476990	149505347,149504293,149503489,149501037,149498307,149496516,149490440,149487098,149483218	Gene ID= ENSG00000010404.17 TPM= 4.83 Transcript Type= protein_coding
chrX	149487131	149505347	149487131	149505347	-	ENST00000370441.8@IDS	ENST00000370441.8	protein_coding	149505035,149504157,149503312,149500949,149498107,149496346,149490314,149487131	149505347,149504293,149503489,149501037,149498307,149496516,149490440,149487313	Gene ID= ENSG00000010404.17 TPM= 3.86 Transcript Type= protein_coding
chrX	149540975	149547309	149540975	149547309	+	ENST00000423421.5@CXorf40A	ENST00000423421.5	protein_coding	149540975,149542019,149545368,149545602,149546739	149541343,149542066,149545500,149545883,149547309	Gene ID= ENSG00000197620.10 TPM= 10.14 Transcript Type= protein_coding
chrX	149540630	149547309	149540630	149547309	+	ENST00000450602.6@CXorf40A	ENST00000450602.6	protein_coding	149540630,149542019,149545368,149545602,149546739	149540799,149542066,149545500,149545883,149547309	Gene ID= ENSG00000197620.10 TPM= 5.31 Transcript Type= protein_coding
chrX	149596556	149631749	149596556	149631749	-	transcript1978.chrX.nnic@TMEM185A	transcript1978.chrX.nnic	protein_coding	149631543,149611287,149608627,149603987,149600303,149599554,149597261,149596556	149631749,149611463,149608834,149604070,149600479,149599677,149598255,149597183	Gene ID= ENSG00000269556.7 TPM= 3.86 Transcript Type= NA
chrX	149596556	149631912	149596556	149631912	-	ENST00000600449.7@TMEM185A	ENST00000600449.7	protein_coding	149631543,149611287,149608627,149603987,149600303,149599554,149596556	149631912,149611463,149608834,149604070,149600479,149599677,149598255	Gene ID= ENSG00000269556.7 TPM= 4.83 Transcript Type= protein_coding
chrX	149596556	149631738	149596556	149631738	-	transcript1981.chrX.nic@TMEM185A	transcript1981.chrX.nic	protein_coding	149631543,149611287,149608627,149600303,149599554,149596556	149631738,149611463,149608834,149600479,149599677,149598255	Gene ID= ENSG00000269556.7 TPM= 1.93 Transcript Type= NA
chrX	149932197	149938483	149932197	149938483	-	transcript1987.chrX.nic@CXorf40B	transcript1987.chrX.nic	protein_coding	149938142,149937433,149934005,149933622,149932197	149938483,149937480,149934137,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 2.9 Transcript Type= NA
chrX	149932197	149938811	149932197	149938811	-	ENST00000370406.7@CXorf40B	ENST00000370406.7	protein_coding	149938193,149937433,149934005,149933622,149932197	149938811,149937480,149934137,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 12.55 Transcript Type= protein_coding
chrX	149932201	149938459	149932201	149938459	-	ENST00000370404.5@CXorf40B	ENST00000370404.5	protein_coding	149938193,149937414,149934005,149933622,149932201	149938459,149937480,149934137,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 1.93 Transcript Type= protein_coding
chrX	150568584	150673140	150568584	150673140	+	transcript1998.chrX.nnic@MTM1	transcript1998.chrX.nnic	protein_coding	150568584,150592605,150596498,150598592,150619038,150638943,150641269,150645683,150649716,150657821,150659664,150660371,150663433,150671428	150568662,150592677,150596570,150598686,150619139,150639026,150641418,150645871,150649901,150658027,150659756,150660484,150663609,150673140	Gene ID= ENSG00000171100.14 TPM= 3.86 Transcript Type= NA
chrX	150693366	150764923	150693366	150764923	+	transcript2001.chrX.nic@MTMR1	transcript2001.chrX.nic	protein_coding	150693366,150699195,150712342,150712944,150718625,150727215,150727684,150730109,150730525,150731470,150732542,150736595,150737242,150744361,150750730,150755689,150762565	150693676,150699300,150712365,150712970,150718700,150727309,150727791,150730210,150730608,150731619,150732730,150736780,150737448,150744453,150750843,150755865,150764923	Gene ID= ENSG00000063601.16 TPM= 20.27 Transcript Type= NA
chrX	150766337	150898706	150766337	150898706	-	ENST00000370377.7@CD99L2	ENST00000370377.7	protein_coding	150898522,150831231,150816007,150814862,150795418,150795206,150793691,150777444,150776174,150770304,150766337	150898706,150831293,150816078,150814936,150795486,150795289,150793756,150777482,150776293,150770369,150769101	Gene ID= ENSG00000102181.20 TPM= 110.43 Transcript Type= protein_coding
chrX	150983286	150990775	150983286	150990775	+	ENST00000325307.11@HMGB3	ENST00000325307.11	protein_coding	150983286,150985595,150986051,150987128,150987777	150983376,150985749,150986190,150987302,150990775	Gene ID= ENSG00000029993.14 TPM= 2.9 Transcript Type= protein_coding
chrX	151397204	151409364	151397204	151409364	+	ENST00000330374.6@VMA21	ENST00000330374.6	protein_coding	151397204,151403631,151404916	151397361,151403740,151409364	Gene ID= ENSG00000160131.13 TPM= 12.55 Transcript Type= protein_coding
chrX	152826973	152830777	152826973	152830777	-	ENST00000370277.3@CETN2	ENST00000370277.3	protein_coding	152830708,152829602,152829149,152828537,152826973	152830777,152829760,152829277,152828674,152827930	Gene ID= ENSG00000147400.8 TPM= 4.83 Transcript Type= protein_coding
chrX	152830967	152869363	152830967	152869363	+	ENST00000440023.5@NSDHL	ENST00000440023.5	protein_coding	152830967,152831634,152846282,152850265,152858770,152862596,152865819,152867571,152868784	152831117,152831700,152846432,152850423,152858916,152862724,152865961,152867673,152869363	Gene ID= ENSG00000147383.10 TPM= 2.9 Transcript Type= protein_coding
chrX	152830967	152869729	152830967	152869729	+	ENST00000370274.7@NSDHL	ENST00000370274.7	protein_coding	152830967,152846282,152850265,152858770,152862596,152865819,152867571,152868784	152831117,152846432,152850423,152858916,152862724,152865961,152867673,152869729	Gene ID= ENSG00000147383.10 TPM= 18.34 Transcript Type= protein_coding
chrX	153447666	153470592	153447666	153470592	-	transcript2040.chrX.nic@HAUS7	transcript2040.chrX.nic	protein_coding	153470450,153469146,153464988,153462610,153457137,153456493,153456265,153455542,153454877,153454394,153447666	153470592,153469261,153465055,153462671,153457228,153456651,153456364,153455766,153455053,153454508,153447909	Gene ID= ENSG00000213397.10 TPM= 5.79 Transcript Type= NA
chrX	153447666	153470631	153447666	153470631	-	ENST00000370211.8@HAUS7	ENST00000370211.8	protein_coding	153470450,153469146,153464988,153462610,153457137,153456493,153456265,153455542,153454394,153447666	153470631,153469261,153465055,153462671,153457228,153456651,153456364,153455766,153454508,153447909	Gene ID= ENSG00000213397.10 TPM= 21.24 Transcript Type= protein_coding
chrX	153494939	153509554	153494939	153509554	+	ENST00000331595.8@BGN	ENST00000331595.8	protein_coding	153494939,153504621,153505238,153505863,153506529,153506830,153507047,153508248	153495113,153504869,153505350,153506076,153506639,153506923,153507185,153509554	Gene ID= ENSG00000182492.15 TPM= 18.34 Transcript Type= protein_coding
chrX	153587932	153599123	153587932	153599123	-	transcript2046.chrX.nnic@FAM58A	transcript2046.chrX.nnic	protein_coding	153598962,153598291,153596004,153594547,153592506,153587932	153599123,153598412,153596187,153594679,153592733,153588394	Gene ID= ENSG00000262919.7 TPM= 2.41 Transcript Type= NA
chrX	153587932	153599131	153587932	153599131	-	transcript2050.chrX.nnic@FAM58A	transcript2050.chrX.nnic	protein_coding	153598962,153596004,153594547,153592506,153587932	153599131,153596187,153594679,153592703,153588394	Gene ID= ENSG00000262919.7 TPM= 2.9 Transcript Type= NA
chrX	153587932	153599117	153587932	153599117	-	ENST00000620088.4@FAM58A	ENST00000620088.4	protein_coding	153598966,153596004,153594547,153592506,153587932	153599117,153596187,153594679,153592733,153588394	Gene ID= ENSG00000262919.7 TPM= 1.45 Transcript Type= nonsense_mediated_decay
chrX	153688099	153696593	153688099	153696593	+	ENST00000253122.9@SLC6A8	ENST00000253122.9	protein_coding	153688099,153690375,153691304,153691975,153693041,153693263,153693462,153693905,153694130,153694344,153694533,153694719,153695074	153688836,153690506,153691553,153692107,153693175,153693366,153693586,153694017,153694267,153694446,153694633,153694889,153696593	Gene ID= ENSG00000130821.15 TPM= 170.86 Transcript Type= protein_coding
chrX	153700499	153724094	153700499	153724094	-	ENST00000458587.6@BCAP31	ENST00000458587.6	protein_coding	153723508,153723153,153720872,153715542,153703959,153702935,153702007,153700499	153724094,153723288,153720972,153715689,153704094,153703058,153702107,153700975	Gene ID= ENSG00000185825.15 TPM= 2.65 Transcript Type= protein_coding
chrX	153700497	153724397	153700497	153724397	-	transcript2064.chrX.nic@BCAP31	transcript2064.chrX.nic	protein_coding	153724201,153723153,153720872,153715542,153703959,153702935,153702007,153700497	153724397,153723288,153720972,153715689,153704094,153703058,153702107,153700975	Gene ID= ENSG00000185825.15 TPM= 10.38 Transcript Type= NA
chrX	153700497	153705361	153700497	153705361	-	transcript2077.chrX.nnic@BCAP31	transcript2077.chrX.nnic	protein_coding	153705158,153703959,153702935,153702007,153700497	153705361,153704094,153703058,153702107,153700975	Gene ID= ENSG00000185825.15 TPM= 8.45 Transcript Type= NA
chrX	153700497	153724697	153700497	153724697	-	ENST00000345046.10@BCAP31	ENST00000345046.10	protein_coding	153724334,153723153,153720872,153715542,153703959,153702935,153702007,153700497	153724697,153723288,153720972,153715689,153704094,153703058,153702107,153700975	Gene ID= ENSG00000185825.15 TPM= 112.7 Transcript Type= protein_coding
chrX	153707392	153711918	153707392	153711918	+	transcript2083.chrX.nnic@NA	transcript2083.chrX.nnic	NA	153707392	153711918	Gene ID= novel_gene_chrX_2084 TPM= 2.9 Transcript Type= NA
chrX	153724868	153744762	153724868	153744762	+	ENST00000218104.5@ABCD1	ENST00000218104.5	protein_coding	153724868,153729232,153736112,153736345,153737157,153740092,153740574,153742987,153743221,153743489	153726166,153729412,153736254,153736513,153737251,153740237,153740719,153743071,153743346,153744762	Gene ID= ENSG00000101986.11 TPM= 30.89 Transcript Type= protein_coding
chrX	153781034	153785728	153781034	153785728	+	transcript2090.chrX.nic@SRPK3	transcript2090.chrX.nic	protein_coding	153781034,153781505,153781743,153782121,153782772,153782953,153783226,153783752,153783974,153784294,153784750,153784934,153785081,153785336	153781346,153781613,153781830,153782208,153782878,153783118,153783251,153783884,153784213,153784394,153784857,153785003,153785173,153785728	Gene ID= ENSG00000184343.10 TPM= 9.65 Transcript Type= NA
chrX	153781041	153785728	153781041	153785728	+	ENST00000370101.7@SRPK3	ENST00000370101.7	protein_coding	153781041,153781216,153781505,153781743,153782121,153782772,153782953,153783226,153783752,153783974,153784294,153784750,153784934,153785081,153785336	153781145,153781346,153781613,153781830,153782208,153782878,153783118,153783251,153783884,153784213,153784394,153784857,153785003,153785173,153785728	Gene ID= ENSG00000184343.10 TPM= 37.65 Transcript Type= protein_coding
chrX	153785766	153794523	153785766	153794523	-	ENST00000217901.9@IDH3G	ENST00000217901.9	protein_coding	153794246,153790810,153790564,153790195,153789712,153788075,153787823,153787464,153787051,153786801,153786355,153786212,153785766	153794523,153790851,153790575,153790292,153789824,153788135,153787955,153787597,153787153,153786947,153786449,153786272,153785973	Gene ID= ENSG00000067829.18 TPM= 72.4 Transcript Type= protein_coding
chrX	153785766	153794377	153785766	153794377	-	transcript2094.chrX.nic@IDH3G	transcript2094.chrX.nic	protein_coding	153794315,153790810,153790564,153790195,153789712,153788075,153787823,153787464,153787051,153786801,153786355,153786212,153785766	153794377,153790851,153790575,153790292,153789824,153788135,153787955,153787597,153787153,153786947,153786449,153786272,153785973	Gene ID= ENSG00000067829.18 TPM= 9.65 Transcript Type= NA
chrX	153793516	153798498	153793516	153798498	+	ENST00000320857.7@SSR4	ENST00000320857.7	protein_coding	153793516,153794674,153796434,153797458,153797725,153798071,153798329	153794585,153794754,153796552,153797532,153797814,153798136,153798498	Gene ID= ENSG00000180879.13 TPM= 6.76 Transcript Type= protein_coding
chrX	153794639	153798505	153794639	153798505	+	ENST00000370086.7@SSR4	ENST00000370086.7	protein_coding	153794639,153796434,153797458,153797725,153798071,153798329	153794754,153796552,153797532,153797814,153798136,153798505	Gene ID= ENSG00000180879.13 TPM= 63.71 Transcript Type= protein_coding
chrX	153904735	153907166	153904735	153907166	+	ENST00000358927.6@AVPR2	ENST00000358927.6	protein_coding	153904735,153904974,153905532,153906523	153904771,153905170,153906416,153907166	Gene ID= ENSG00000126895.13 TPM= 6.76 Transcript Type= protein_coding
chrX	153907377	153926244	153907377	153926244	-	ENST00000350060.9@ARHGAP4	ENST00000350060.9	protein_coding	153926136,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907377	153926244,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962	Gene ID= ENSG00000089820.15 TPM= 6.76 Transcript Type= protein_coding
chrX	153929242	153935223	153929242	153935223	-	ENST00000464845.5@NAA10	ENST00000464845.5	protein_coding	153934884,153934377,153933943,153932539,153932316,153932071,153930763,153929242	153935223,153934475,153934001,153932584,153932431,153932115,153930847,153930223	Gene ID= ENSG00000102030.15 TPM= 119.7 Transcript Type= protein_coding
chrX	153929924	153935015	153929924	153935015	-	ENST00000370009.5@NAA10	ENST00000370009.5	protein_coding	153934884,153934377,153933943,153932539,153932316,153930763,153929924	153935015,153934475,153934001,153932584,153932431,153930847,153930223	Gene ID= ENSG00000102030.15 TPM= 16.41 Transcript Type= protein_coding
chrX	153929926	153935015	153929926	153935015	-	ENST00000466877.5@NAA10	ENST00000466877.5	protein_coding	153934884,153934377,153933943,153932539,153932071,153930763,153929926	153935015,153934475,153934001,153932584,153932431,153930847,153930223	Gene ID= ENSG00000102030.15 TPM= 8.69 Transcript Type= retained_intron
chrX	153929921	153931598	153929921	153931598	-	transcript2122.chrX.nnic@NA	transcript2122.chrX.nnic	NA	153929921	153931598	Gene ID= novel_gene_chrX_2123 TPM= 1.93 Transcript Type= NA
chrX	153972327	153983195	153972327	153983195	+	ENST00000369982.4@TMEM187	ENST00000369982.4	protein_coding	153972327,153981850	153972860,153983195	Gene ID= ENSG00000177854.7 TPM= 7.72 Transcript Type= protein_coding
chrX	154010506	154019921	154010506	154019921	-	transcript2150.chrX.nic@IRAK1	transcript2150.chrX.nic	protein_coding	154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154014042,154013043,154012529,154010506	154019921,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154014278,154013433,154012678,154011917	Gene ID= ENSG00000184216.13 TPM= 29.71 Transcript Type= NA
chrX	154015106	154017826	154015106	154017826	-	transcript2178.chrX.nic@IRAK1	transcript2178.chrX.nic	protein_coding	154016949,154015106	154017826,154016644	Gene ID= ENSG00000184216.13 TPM= 13.51 Transcript Type= NA
chrX	154010500	154019980	154010500	154019980	-	ENST00000369980.7@IRAK1	ENST00000369980.7	protein_coding	154019677,154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154014042,154013043,154012529,154010500	154019980,154019598,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154014278,154013433,154012678,154011917	Gene ID= ENSG00000184216.13 TPM= 266.21 Transcript Type= protein_coding
chrX	154010506	154019876	154010506	154019876	-	ENST00000369974.6@IRAK1	ENST00000369974.6	protein_coding	154019677,154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154013043,154012529,154010506	154019876,154019598,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154013433,154012678,154011917	Gene ID= ENSG00000184216.13 TPM= 26.82 Transcript Type= protein_coding
chrX	154030234	154097719	154030234	154097719	-	transcript2167.chrX.nnic@MECP2	transcript2167.chrX.nnic	protein_coding	154097604,154094378,154092184,154032207,154030234	154097719,154094489,154092307,154032557,154031450	Gene ID= ENSG00000169057.21 TPM= 5.79 Transcript Type= NA
chrX	154021573	154097755	154021573	154097755	-	ENST00000303391.10@MECP2	ENST00000303391.10	protein_coding	154097604,154092184,154032207,154021573	154097755,154092307,154032557,154031450	Gene ID= ENSG00000169057.21 TPM= 11.58 Transcript Type= protein_coding
chrX	154030234	154097764	154030234	154097764	-	ENST00000453960.6@MECP2	ENST00000453960.6	protein_coding	154097604,154032207,154030234	154097764,154032557,154031450	Gene ID= ENSG00000169057.21 TPM= 33.79 Transcript Type= protein_coding
chrX	154379197	154381523	154379197	154381523	+	ENST00000369842.8@EMD	ENST00000369842.8	protein_coding	154379197,154379690,154379942,154380234,154380753,154380882	154379566,154379794,154380019,154380367,154380802,154381523	Gene ID= ENSG00000102119.10 TPM= 32.82 Transcript Type= protein_coding
chrX	154397154	154400917	154397154	154400917	+	ENST00000369817.6@RPL10	ENST00000369817.6	protein_coding	154397154,154398065,154398497,154399338,154399487,154399803,154400464,154400702	154397376,154398394,154398542,154399396,154399594,154399941,154400626,154400917	Gene ID= ENSG00000147403.16 TPM= 1869.81 Transcript Type= protein_coding
chrX	154398372	154402339	154398372	154402339	+	ENST00000344746.8@RPL10	ENST00000344746.8	protein_coding	154398372,154399338,154399487,154399803,154400464,154400702	154398542,154399396,154399594,154399941,154400626,154402339	Gene ID= ENSG00000147403.16 TPM= 14.48 Transcript Type= protein_coding
chrX	154398388	154400913	154398388	154400913	+	ENST00000482732.1@RPL10	ENST00000482732.1	protein_coding	154398388,154399338	154398542,154400913	Gene ID= ENSG00000147403.16 TPM= 4.83 Transcript Type= retained_intron
chrX	154398497	154400913	154398497	154400913	+	ENST00000467168.5@RPL10	ENST00000467168.5	protein_coding	154398497,154399338,154399487,154399803,154400464	154398542,154399396,154399594,154399941,154400913	Gene ID= ENSG00000147403.16 TPM= 14.48 Transcript Type= retained_intron
chrX	154401761	154412112	154401761	154412112	-	ENST00000309585.9@DNASE1L1	ENST00000309585.9	protein_coding	154411891,154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401761	154412112,154409196,154405655,154405083,154404914,154403622,154403381,154403190,154402841	Gene ID= ENSG00000013563.13 TPM= 5.47 Transcript Type= protein_coding
chrX	154401758	154409276	154401758	154409276	-	ENST00000369807.5@DNASE1L1	ENST00000369807.5	protein_coding	154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401758	154409276,154405655,154405083,154404914,154403622,154403381,154403190,154402841	Gene ID= ENSG00000013563.13 TPM= 39.26 Transcript Type= protein_coding
chrX	154401758	154409278	154401758	154409278	-	ENST00000369808.7@DNASE1L1	ENST00000369808.7	protein_coding	154408558,154405434,154404995,154404828,154403522,154403269,154402942,154401758	154409278,154405655,154405083,154404914,154403622,154403381,154403190,154402841	Gene ID= ENSG00000013563.13 TPM= 9.33 Transcript Type= protein_coding
chrX	154411498	154421726	154411498	154421726	+	transcript2191.chrX.nnic@TAZ	transcript2191.chrX.nnic	protein_coding	154411498,154412086,154413207,154413482,154418546,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154418602,154419623,154419746,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 2.17 Transcript Type= NA
chrX	154411550	154421726	154411550	154421726	+	transcript2193.chrX.nnic@TAZ	transcript2193.chrX.nnic	protein_coding	154411550,154412086,154413207,154413482,154418546,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413339,154413567,154418602,154419623,154419746,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 3.14 Transcript Type= NA
chrX	154411674	154421726	154411674	154421726	+	transcript2199.chrX.nic@TAZ	transcript2199.chrX.nic	protein_coding	154411674,154412086,154413207,154413482,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413339,154413567,154419623,154419746,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 2.17 Transcript Type= NA
chrX	154411498	154421726	154411498	154421726	+	transcript2208.chrX.nnic@TAZ	transcript2208.chrX.nnic	protein_coding	154411498,154412086,154413207,154413482,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154419746,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 2.17 Transcript Type= NA
chrX	154411559	154421726	154411559	154421726	+	transcript2209.chrX.nic@TAZ	transcript2209.chrX.nic	protein_coding	154411559,154412086,154413207,154413482,154419543,154420032,154420212,154420658,154420903	154411952,154412214,154413339,154413567,154419623,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 2.17 Transcript Type= NA
chrX	154411498	154421726	154411498	154421726	+	transcript2210.chrX.nic@TAZ	transcript2210.chrX.nic	protein_coding	154411498,154412086,154413207,154413482,154414101,154419543,154420212,154420658,154420903	154411952,154412214,154413358,154413567,154414190,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 3.14 Transcript Type= NA
chrX	154411550	154421726	154411550	154421726	+	transcript2217.chrX.nic@TAZ	transcript2217.chrX.nic	protein_coding	154411550,154412086,154413207,154413482,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 3.14 Transcript Type= NA
chrX	154411498	154421726	154411498	154421726	+	transcript2219.chrX.nic@TAZ	transcript2219.chrX.nic	protein_coding	154411498,154412086,154413207,154413482,154419543,154420212,154420658,154420903	154411952,154412214,154413358,154413567,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 2.17 Transcript Type= NA
chrX	154411549	154421726	154411549	154421726	+	transcript2226.chrX.nic@TAZ	transcript2226.chrX.nic	protein_coding	154411549,154412086,154413207,154419543,154420212,154420658,154420903	154411952,154412214,154413567,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 2.17 Transcript Type= NA
chrX	154411556	154421726	154411556	154421726	+	ENST00000601016.5@TAZ	ENST00000601016.5	protein_coding	154411556,154412086,154413207,154413482,154414101,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154414190,154419623,154419746,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 9.89 Transcript Type= protein_coding
chrX	154411556	154421720	154411556	154421720	+	ENST00000612460.4@TAZ	ENST00000612460.4	protein_coding	154411556,154412086,154413207,154413482,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154419623,154419746,154420094,154420264,154420735,154421720	Gene ID= ENSG00000102125.15 TPM= 7.96 Transcript Type= protein_coding
chrX	154411541	154421726	154411541	154421726	+	ENST00000475699.5@TAZ	ENST00000475699.5	protein_coding	154411541,154412086,154413207,154413482,154414101,154419543,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154414190,154419623,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 2.17 Transcript Type= protein_coding
chrX	154424380	154428479	154424380	154428479	-	ENST00000360656.2@CH17-340M24.3	ENST00000360656.2	lincRNA	154428128,154424380	154428479,154424625	Gene ID= ENSG00000197180.2 TPM= 3.86 Transcript Type= lincRNA
chrX	154428632	154436516	154428632	154436516	+	ENST00000369762.6@ATP6AP1	ENST00000369762.6	protein_coding	154428632,154429048,154431830,154432266,154432931,154433635,154434208,154435139,154435274,154435682	154428853,154429174,154431904,154432459,154432971,154433720,154434446,154435186,154435505,154436516	Gene ID= ENSG00000071553.16 TPM= 79.16 Transcript Type= protein_coding
chrX	154436920	154443467	154436920	154443467	+	ENST00000447750.6@GDI1	ENST00000447750.6	protein_coding	154436920,154438523,154438765,154439006,154439941,154440375,154441096,154441623,154442111,154442374,154442520	154437299,154438630,154438864,154439140,154440139,154440506,154441195,154441794,154442255,154442428,154443467	Gene ID= ENSG00000203879.11 TPM= 47.3 Transcript Type= protein_coding
chrX	154444126	154450654	154444126	154450654	+	ENST00000393600.7@FAM50A	ENST00000393600.7	protein_coding	154444126,154445633,154445812,154446415,154448484,154448690,154448893,154449221,154449681,154449883,154450029,154450209,154450424	154444346,154445717,154445911,154446560,154448560,154448756,154448954,154449297,154449735,154449931,154450099,154450319,154450654	Gene ID= ENSG00000071859.14 TPM= 167 Transcript Type= protein_coding
chrX	154444155	154450654	154444155	154450654	+	ENST00000464419.5@FAM50A	ENST00000464419.5	protein_coding	154444155,154445633,154445812,154446415,154448484,154448690,154448893,154449221,154449681,154450029,154450209,154450424	154444346,154445717,154445911,154446560,154448560,154448756,154448954,154449297,154449931,154450099,154450319,154450654	Gene ID= ENSG00000071859.14 TPM= 25.1 Transcript Type= retained_intron
chrX	154477769	154479257	154477769	154479257	-	ENST00000357360.4@LAGE3	ENST00000357360.4	protein_coding	154478728,154478283,154477769	154479257,154478411,154478058	Gene ID= ENSG00000196976.7 TPM= 51.16 Transcript Type= protein_coding
chrX	154483717	154486700	154483717	154486700	-	transcript2262.chrX.nic@UBL4A	transcript2262.chrX.nic	protein_coding	154486537,154485771,154483717	154486700,154486333,154485649	Gene ID= ENSG00000102178.12 TPM= 9.65 Transcript Type= NA
chrX	154483717	154486670	154483717	154486670	-	ENST00000369660.8@UBL4A	ENST00000369660.8	protein_coding	154486537,154486228,154485771,154483717	154486670,154486333,154485979,154485649	Gene ID= ENSG00000102178.12 TPM= 184.37 Transcript Type= protein_coding
chrX	154487306	154490698	154487306	154490698	-	transcript2267.chrX.nic@SLC10A3	transcript2267.chrX.nic	protein_coding	154490307,154488584,154487306	154490698,154489082,154488496	Gene ID= ENSG00000126903.15 TPM= 7.24 Transcript Type= NA
chrX	154487306	154490614	154487306	154490614	-	ENST00000369649.8@SLC10A3	ENST00000369649.8	protein_coding	154490594,154490307,154488584,154487306	154490614,154490358,154489082,154488496	Gene ID= ENSG00000126903.15 TPM= 7.24 Transcript Type= protein_coding
chrX	154487343	154490663	154487343	154490663	-	ENST00000393587.4@SLC10A3	ENST00000393587.4	protein_coding	154490594,154490307,154487343	154490663,154490358,154489082	Gene ID= ENSG00000126903.15 TPM= 1.93 Transcript Type= protein_coding
chrX	154504993	154506585	154504993	154506585	-	transcript2290.chrX.nnic@NA	transcript2290.chrX.nnic	NA	154504993	154506585	Gene ID= novel_gene_chrX_2291 TPM= 1.93 Transcript Type= NA
chrX	154506171	154516308	154506171	154516308	-	transcript2281.chrX.nic@FAM3A	transcript2281.chrX.nic	protein_coding	154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516308,154512936,154511871,154508811,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 4.44 Transcript Type= NA
chrX	154506171	154516250	154506171	154516250	-	transcript2282.chrX.nic@FAM3A	transcript2282.chrX.nic	protein_coding	154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516250,154512936,154511871,154508597,154508347,154507882,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 9.27 Transcript Type= NA
chrX	154506171	154516250	154506171	154516250	-	transcript2284.chrX.nic@FAM3A	transcript2284.chrX.nic	protein_coding	154515760,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516250,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 4.44 Transcript Type= NA
chrX	154506159	154516236	154506159	154516236	-	ENST00000359889.9@FAM3A	ENST00000359889.9	protein_coding	154515910,154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506159	154516236,154515812,154512936,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 12 Transcript Type= protein_coding
chrX	154506171	154516239	154506171	154516239	-	ENST00000447601.6@FAM3A	ENST00000447601.6	protein_coding	154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516239,154512936,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 53.67 Transcript Type= protein_coding
chrX	154506171	154516242	154506171	154516242	-	ENST00000621967.4@FAM3A	ENST00000621967.4	protein_coding	154515760,154512823,154512314,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516242,154512936,154512411,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 4.44 Transcript Type= nonsense_mediated_decay
chrX	154506160	154516242	154506160	154516242	-	ENST00000419205.5@FAM3A	ENST00000419205.5	protein_coding	154515760,154512823,154511848,154508474,154508289,154507406,154507203,154506160	154516242,154512936,154511871,154508597,154508347,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 1.54 Transcript Type= protein_coding
chrX	154547307	154565046	154547307	154565046	+	ENST00000594239.5@IKBKG	ENST00000594239.5	protein_coding	154547307,154551988,154556165,154558532,154560407,154561688,154562810,154563559,154563959,154564319	154547745,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565046	Gene ID= ENSG00000269335.5 TPM= 32.82 Transcript Type= protein_coding
chrX	154547641	154565033	154547641	154565033	+	ENST00000617207.4@IKBKG	ENST00000617207.4	protein_coding	154547641,154551988,154556165,154558535,154560407,154561688,154562810,154563559,154563959,154564319	154547745,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565033	Gene ID= ENSG00000269335.5 TPM= 2.9 Transcript Type= protein_coding
chrX	154762721	154776325	154762721	154776325	+	transcript2302.chrX.nic@DKC1	transcript2302.chrX.nic	protein_coding	154762721,154764899,154765444,154765907,154766216,154766997,154767256,154768302,154769167,154770759,154773131,154774602,154775195,154776187	154762981,154764966,154765530,154765998,154766400,154767061,154767382,154768432,154769310,154770879,154773249,154774705,154775273,154776325	Gene ID= ENSG00000130826.17 TPM= 3.86 Transcript Type= NA
chrX	154778686	154805527	154778686	154805527	-	ENST00000413259.7@MPP1	ENST00000413259.7	protein_coding	154805272,154799745,154792142,154791769,154790983,154789954,154786204,154785051,154784028,154783427,154781600,154781239,154778686	154805527,154799893,154792285,154791847,154791068,154790022,154786400,154785157,154784108,154783507,154781802,154781313,154779353	Gene ID= ENSG00000130830.14 TPM= 1.45 Transcript Type= protein_coding
chrX	154778684	154805521	154778684	154805521	-	ENST00000369534.7@MPP1	ENST00000369534.7	protein_coding	154805272,154792142,154791769,154790983,154789954,154786204,154785051,154784028,154783427,154781600,154781239,154778684	154805521,154792285,154791847,154791068,154790022,154786400,154785157,154784108,154783507,154781802,154781313,154779353	Gene ID= ENSG00000130830.14 TPM= 15.93 Transcript Type= protein_coding
chrX	154835788	154886317	154835788	154886317	-	ENST00000330287.10@F8	ENST00000330287.10	protein_coding	154886134,154863083,154861718,154860432,154835788	154886317,154863227,154861866,154860608,154837752	Gene ID= ENSG00000185010.13 TPM= 6.76 Transcript Type= protein_coding
chrX	154886349	154888061	154886349	154888061	+	ENST00000610495.1@F8A1	ENST00000610495.1	protein_coding	154886349	154888061	Gene ID= ENSG00000277203.1 TPM= 209.47 Transcript Type= protein_coding
chrX	154930153	155022952	154930153	155022952	-	transcript2311.chrX.nic@F8	transcript2311.chrX.nic	protein_coding	155022410,154999479,154996973,154992936,154987237,154984687,154969331,154966426,154965970,154961075,154956957,154953892,154947698,154930153	155022952,154999600,154997095,154993148,154987305,154984803,154969552,154966687,154966141,154961168,154957171,154954042,154947907,154931676	Gene ID= ENSG00000185010.13 TPM= 13.51 Transcript Type= NA
chrX	155026685	155060303	155026685	155060303	+	ENST00000369498.7@FUNDC2	ENST00000369498.7	protein_coding	155026685,155033403,155046509,155051670,155054595	155027071,155033553,155046584,155051801,155060303	Gene ID= ENSG00000165775.17 TPM= 6.76 Transcript Type= protein_coding
chrX	155061622	155071362	155061622	155071362	-	ENST00000369484.7@CMC4	ENST00000369484.7	protein_coding	155070694,155063966,155061622	155071362,155064033,155061991	Gene ID= ENSG00000182712.15 TPM= 23.17 Transcript Type= protein_coding
chrX	155071499	155123072	155071499	155123072	+	ENST00000369459.6@BRCC3	ENST00000369459.6	protein_coding	155071499,155072327,155073377,155077170,155078616,155089263,155090784,155116711,155119999,155121223	155071650,155072343,155073431,155077289,155078703,155089351,155090839,155116754,155120168,155123072	Gene ID= ENSG00000185515.14 TPM= 1.93 Transcript Type= protein_coding
chrX	155216366	155239817	155216366	155239817	+	ENST00000286428.5@VBP1	ENST00000286428.5	protein_coding	155216366,155220183,155227235,155228384,155236229,155238772	155216575,155220307,155227301,155228482,155236367,155239817	Gene ID= ENSG00000155959.10 TPM= 100.39 Transcript Type= protein_coding
chrX	155456914	155458672	155456914	155458672	-	ENST00000622749.1@F8A3	ENST00000622749.1	protein_coding	155456914	155458672	Gene ID= ENSG00000277150.1 TPM= 68.54 Transcript Type= protein_coding
chrX	155491974	155612961	155491974	155612961	-	transcript2365.chrX.nic@TMLHE	transcript2365.chrX.nic	protein_coding	155612792,155545096,155524456,155513986,155511673,155506898,155491974	155612961,155545277,155524632,155514265,155511792,155507134,155492495	Gene ID= ENSG00000185973.10 TPM= 2.9 Transcript Type= NA
chrX	155490115	155612936	155490115	155612936	-	ENST00000334398.7@TMLHE	ENST00000334398.7	protein_coding	155612792,155545096,155524456,155513986,155511673,155506898,155492357,155490115	155612936,155545277,155524632,155514265,155511792,155507134,155492495,155491666	Gene ID= ENSG00000185973.10 TPM= 3.86 Transcript Type= protein_coding
chrX	155492535	155612877	155492535	155612877	-	ENST00000369439.4@TMLHE	ENST00000369439.4	protein_coding	155612792,155545096,155524456,155513986,155511673,155506898,155492535	155612877,155545277,155524632,155514265,155511792,155507134,155492700	Gene ID= ENSG00000185973.10 TPM= 6.76 Transcript Type= protein_coding
chrX	155881293	155943769	155881293	155943769	+	ENST00000286448.11@VAMP7	ENST00000286448.11	protein_coding	155881293,155889458,155895623,155898112,155900497,155919813,155939701,155941883	155881448,155889612,155895680,155898249,155900587,155919880,155939793,155943769	Gene ID= ENSG00000124333.15 TPM= 26.06 Transcript Type= protein_coding
chrX	155881375	155943769	155881375	155943769	+	ENST00000262640.11@VAMP7	ENST00000262640.11	protein_coding	155881375,155889458,155895623,155898112,155900497,155939701,155941883	155881448,155889612,155895680,155898249,155900587,155939793,155943769	Gene ID= ENSG00000124333.15 TPM= 1.93 Transcript Type= protein_coding
chrX	156021688	156025710	156021688	156025710	+	ENST00000460206.6@WASH6P	ENST00000460206.6	transcribed_unprocessed_pseudogene	156021688,156021999,156022314,156023012,156023302,156024120,156025032,156025241	156021792,156022145,156022834,156023213,156023460,156024272,156025100,156025710	Gene ID= ENSG00000182484.15 TPM= 11.58 Transcript Type= processed_transcript
chrY	304750	318819	304750	318819	-	ENST00000326153.9_PAR_Y@GTPBP6	ENST00000326153.9_PAR_Y	protein_coding	318439,316914,315229,314890,314150,312766,311419,307732,307360,304750	318819,317051,315299,315020,314217,312924,311627,307880,307512,305197	Gene ID= ENSG00000178605.13_PAR_Y TPM= 75.29 Transcript Type= protein_coding
chrY	333963	386710	333963	386710	-	ENST00000390665.8_PAR_Y@PPP2R3B	ENST00000390665.8_PAR_Y	protein_coding	386368,361405,347590,347234,346701,346174,345516,341883,341307,340765,338778,338604,333963	386710,361590,347693,347336,346775,346260,345672,341931,341396,340940,338896,338710,334517	Gene ID= ENSG00000167393.17_PAR_Y TPM= 3.86 Transcript Type= protein_coding
chrY	1336616	1382685	1336616	1382685	+	ENST00000331035.9_PAR_Y@IL3RA	ENST00000331035.9_PAR_Y	protein_coding	1336616,1341728,1345316,1348431,1352100,1352322,1356221,1358861,1365138,1378659,1381023,1382391	1336926,1341829,1345434,1348545,1352232,1352506,1356336,1358887,1365252,1378764,1381104,1382685	Gene ID= ENSG00000185291.11_PAR_Y TPM= 1.93 Transcript Type= protein_coding
chrY	1386152	1392724	1386152	1392724	-	ENST00000381401.10_PAR_Y@SLC25A6	ENST00000381401.10_PAR_Y	protein_coding	1391899,1389241,1387279,1386152	1392724,1389727,1387419,1386759	Gene ID= ENSG00000169100.13_PAR_Y TPM= 198.85 Transcript Type= protein_coding
chrY	1403141	1452873	1403141	1452873	-	ENST00000381317.8_PAR_Y@ASMTL	ENST00000381317.8_PAR_Y	protein_coding	1452748,1442186,1439097,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403141	1452873,1442317,1439144,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489	Gene ID= ENSG00000169093.15_PAR_Y TPM= 12.55 Transcript Type= protein_coding
chrY	1591593	1602514	1591593	1602514	+	ENST00000313871.8_PAR_Y@AKAP17A	ENST00000313871.8_PAR_Y	protein_coding	1591593,1593444,1595384,1599192,1600659	1591769,1594224,1595532,1599432,1602514	Gene ID= ENSG00000197976.11_PAR_Y TPM= 34.27 Transcript Type= protein_coding
chrY	1591623	1602502	1591623	1602502	+	ENST00000474361.6_PAR_Y@AKAP17A	ENST00000474361.6_PAR_Y	protein_coding	1591623,1593444,1595384,1599192,1600138,1600659	1591769,1594224,1595532,1599432,1600207,1602502	Gene ID= ENSG00000197976.11_PAR_Y TPM= 36.2 Transcript Type= nonsense_mediated_decay
chrY	2691179	2741309	2691179	2741309	+	ENST00000381192.8_PAR_Y@CD99	ENST00000381192.8_PAR_Y	protein_coding	2691179,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2738200,2740779	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2738256,2741309	Gene ID= ENSG00000002586.18_PAR_Y TPM= 23.65 Transcript Type= protein_coding
chrY	2691310	2733672	2691310	2733672	+	ENST00000482405.7_PAR_Y@CD99	ENST00000482405.7_PAR_Y	protein_coding	2691310,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2733357	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2733672	Gene ID= ENSG00000002586.18_PAR_Y TPM= 3.38 Transcript Type= processed_transcript
chrY	57067813	57130289	57067813	57130289	+	ENST00000286448.11_PAR_Y@VAMP7	ENST00000286448.11_PAR_Y	protein_coding	57067813,57075978,57082143,57084632,57087017,57106333,57126221,57128403	57067968,57076132,57082200,57084769,57087107,57106400,57126313,57130289	Gene ID= ENSG00000124333.15_PAR_Y TPM= 40.54 Transcript Type= protein_coding
chrY	57208208	57212230	57208208	57212230	+	ENST00000460206.6_PAR_Y@WASH6P	ENST00000460206.6_PAR_Y	transcribed_unprocessed_pseudogene	57208208,57208519,57208834,57209532,57209822,57210640,57211552,57211761	57208312,57208665,57209354,57209733,57209980,57210792,57211620,57212230	Gene ID= ENSG00000182484.15_PAR_Y TPM= 13.51 Transcript Type= processed_transcript