Information for 1-SCATTGTBYN (Motif 1)

A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G
Reverse Opposite:
G T A C C T A G T C G A C G T A A G T C T C G A T C G A C G A T C T A G T A C G
p-value:1e-437
log p-value:-1.008e+03
Information Content per bp:1.551
Number of Target Sequences with motif2380.0
Percentage of Target Sequences with motif70.02%
Number of Background Sequences with motif15008.0
Percentage of Background Sequences with motif32.43%
Average Position of motif in Targets396.1 +/- 230.1bp
Average Position of motif in Background363.7 +/- 222.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.72
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:SCATTGTBYN
CCWTTGTYYB
 A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-SCATTGTBYN
NCCATTGTTY-
 A C G T A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:SCATTGTBYN
CCATTGTTYB
 A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--SCATTGTBYN
NNCCATTGTNN-
 A C G T A C G T A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.96
Offset:0
Orientation:forward strand
Alignment:SCATTGTBYN
CCATTGTTNY
 A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:6
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-SCATTGTBYN-
BCCWTTGTBYKV
 A C G T A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

SOX8/MA0868.2/Jaspar

Match Rank:7
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:SCATTGTBYN
CCATTGTTCT
 A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G
A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T

SOX15/MA1152.1/Jaspar

Match Rank:8
Score:0.95
Offset:0
Orientation:forward strand
Alignment:SCATTGTBYN
CTATTGTTTT
 A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G
A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.95
Offset:0
Orientation:forward strand
Alignment:SCATTGTBYN
CCATTGTTTT
 A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

SOX2/MA0143.4/Jaspar

Match Rank:10
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--SCATTGTBYN
NNCCATTGTNN-
 A C G T A C G T A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T