Information for 17-HATNRTTSCC (Motif 13)

G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C
Reverse Opposite:
T C A G C A T G T A C G T C G A T G C A A G T C T G C A G C T A A C G T C A T G
p-value:1e-25
log p-value:-5.892e+01
Information Content per bp:1.434
Number of Target Sequences with motif193.0
Percentage of Target Sequences with motif5.68%
Number of Background Sequences with motif1118.8
Percentage of Background Sequences with motif2.42%
Average Position of motif in Targets380.6 +/- 252.6bp
Average Position of motif in Background353.6 +/- 213.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:HATNRTTSCC---
---NNTTCCCANN
 G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

RELB/MA1117.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:HATNRTTSCC---
--GAATTCCCCGG
 G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

TFDP1/MA1122.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:HATNRTTSCC----
---NNTTCCCGCCN
 G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A T G C A C G T G A C T T A G C A T G C A T G C C T A G A T G C A T G C A T G C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:HATNRTTSCC---
---HTTTCCCASG
 G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---HATNRTTSCC----
GANNATTAATCCCTNNN
 A C G T A C G T A C G T G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:HATNRTTSCC---
---NYTTCCCGCC
 G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---HATNRTTSCC----
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:HATNRTTSCC----
-----ATGCCCACC
 G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----HATNRTTSCC---
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:HATNRTTSCC-----
-----TTCCCGCCWG
 G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G