Information for 25-AGATGGGC (Motif 22)

C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C C G T A A C G T A G T C A C G T
p-value:1e-6
log p-value:-1.477e+01
Information Content per bp:1.530
Number of Target Sequences with motif142.0
Percentage of Target Sequences with motif4.18%
Number of Background Sequences with motif1244.6
Percentage of Background Sequences with motif2.69%
Average Position of motif in Targets414.1 +/- 250.2bp
Average Position of motif in Background361.5 +/- 221.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----AGATGGGC
GGAACAGATGGCA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----AGATGGGC-
GGACAGATGGCAG
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGGC
AACAGATGGT-
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGGC
AACAGATGGC-
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

HAND2/MA1638.1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGATGGGC
ACCAGATGGC-
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T

ZNF449/MA1656.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGATGGGC----
NNGGTTGGGCTTNN
 A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------AGATGGGC---
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGGC
DMCAGATGKS-
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C
C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C A C G T

TWIST1/MA1123.2/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AGATGGGC
ATTCCAGATGTTT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C
C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T

Ptf1a/MA1618.1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGATGGGC-
AAACAGATGTTTA
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C A C G T
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A