Information for 9-TGACTGGCACTG (Motif 4)

G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G
Reverse Opposite:
T A G C G C T A T C A G A G C T T C A G G T A C A G T C C G T A A T C G A C G T T A G C C G T A
p-value:1e-46
log p-value:-1.066e+02
Information Content per bp:1.711
Number of Target Sequences with motif560.0
Percentage of Target Sequences with motif16.48%
Number of Background Sequences with motif4049.9
Percentage of Background Sequences with motif8.75%
Average Position of motif in Targets392.3 +/- 235.5bp
Average Position of motif in Background363.1 +/- 222.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGACTGGCACTG
TGTCTGDCACCT
 G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGGCACTG
BTGABTGACAGS-
 A C G T G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGACTGGCACTG
CTGTCTGTCACCT
 A C G T G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGACTGGCACTG
-VGCTGGCA---
 G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G
A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGACTGGCACTG-
CAATCACTGGCAGAAT
 A C G T A C G T A C G T G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGGCACTG
NTGATTGACAGN-
 A C G T G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGACTGGCACTG
-GGTTGGCAT--
 G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGACTGGCACTG
-VGCTGWCAVB-
 G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGACTGGCACTG
--NTTGGCANN-
 G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

PBX3/MA1114.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGGCACTG----
NNNCCTGTCACTCANNN
 A C G T G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G A C G T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C