Information for 9-GCYATTCA (Motif 7)

A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A
Reverse Opposite:
C G A T T A C G C G T A C G T A G C A T C T A G T A C G T G A C
p-value:1e-41
log p-value:-9.492e+01
Information Content per bp:1.686
Number of Target Sequences with motif1446.0
Percentage of Target Sequences with motif42.54%
Number of Background Sequences with motif14567.6
Percentage of Background Sequences with motif31.48%
Average Position of motif in Targets399.2 +/- 264.2bp
Average Position of motif in Background361.7 +/- 220.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GCYATTCA-------
-ACATTCATGACACG
 A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCYATTCA--
AGCCAATCAGA
 A C G T A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A A C G T A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCYATTCA------
GACCACATTCATACAAT
 A C G T A C G T A C G T A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCYATTCA--
AACCAATCAGA
 A C G T A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A A C G T A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCYATTCA
ACTAGCCAATCA
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCYATTCA------
AATCAATTCAATAATT
 A C G T A C G T A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCYATTCA----
TAACCACTCAAGAA
 A C G T A C G T A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A A C G T A C G T A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GCYATTCA----
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCYATTCA-
-CCAATCAA
 A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A A C G T
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCYATTCA---
-CCTTTGATST
 A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A A C G T A C G T A C G T
A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T