Information for 10-ASAAAGRCTG (Motif 9)

C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G
Reverse Opposite:
G T A C C G T A T A C G A G C T A T G C C G A T C A G T A G C T A T C G G C A T
p-value:1e-38
log p-value:-8.793e+01
Information Content per bp:1.653
Number of Target Sequences with motif1754.0
Percentage of Target Sequences with motif51.60%
Number of Background Sequences with motif18758.3
Percentage of Background Sequences with motif40.54%
Average Position of motif in Targets412.5 +/- 270.7bp
Average Position of motif in Background362.4 +/- 224.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ASAAAGRCTG-
---TWGTCTGV
 C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ASAAAGRCTG
AAAACAAAGAA--
 A C G T A C G T A C G T C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ASAAAGRCTG-
---NNNANTGA
 C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ASAAAGRCTG--
------GCTGTG
 C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

SOX4/MA0867.2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ASAAAGRCTG
GAACAAAGGG--
 A C G T A C G T C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ASAAAGRCTG
GGAACAAAGR---
 A C G T A C G T A C G T C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ASAAAGRCTG
VRRACAAWGG---
 A C G T A C G T A C G T C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ASAAAGRCTG------
GTTCCAAAATGGCTGCCTCCG
 A C G T A C G T A C G T A C G T A C G T C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

ZSCAN4/MA1155.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ASAAAGRCTG----
TGCACACACTGAAAA
 A C G T C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G A C G T A C G T A C G T A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ASAAAGRCTG
RACAAWGG---
 A C G T C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T