Information for 23-CGGAGAGAAT (Motif 21)

T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T
Reverse Opposite:
C G T A A G C T C G A T G A T C G C A T A G T C G A C T A T G C G A T C A T C G
p-value:1e-43
log p-value:-9.940e+01
Information Content per bp:1.630
Number of Target Sequences with motif4781.0
Percentage of Target Sequences with motif38.98%
Number of Background Sequences with motif12238.4
Percentage of Background Sequences with motif33.02%
Average Position of motif in Targets453.5 +/- 325.7bp
Average Position of motif in Background400.1 +/- 244.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGGAGAGAAT---
--NAGAGAAAGNA
 T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGGAGAGAAT-
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CGGAGAGAAT-
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGGAGAGAAT
CWGGCGGGAA-
 A C G T T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGGAGAGAAT
CGGAGC----
 T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ZNF263/MA0528.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGGAGAGAAT-
GGGGGGAGGAGG
 A C G T T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T A C G T
T C A G A T C G C T A G T A C G A T C G A C T G G T C A A C T G A T C G T G C A T A C G A T C G

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGGAGAGAAT--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

E2F6/MA0471.2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGGAGAGAAT-
GGGGGCGGGAAGG
 A C G T A C G T T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T A C G T
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGGAGAGAAT
AGGTGTTAAT
 T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGGAGAGAAT---
TTGACCGAGAATTCC
 A C G T A C G T T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C