Information for 18-AAATGCCA (Motif 12)

C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A
Reverse Opposite:
A C G T A C T G T C A G A G T C C T G A C G A T A G C T A C G T
p-value:1e-15
log p-value:-3.494e+01
Information Content per bp:1.761
Number of Target Sequences with motif442.0
Percentage of Target Sequences with motif26.93%
Number of Background Sequences with motif8962.2
Percentage of Background Sequences with motif18.83%
Average Position of motif in Targets419.3 +/- 267.6bp
Average Position of motif in Background372.6 +/- 226.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A1/MA1112.2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AAATGCCA--
TTAAAGGTCAAA
 A C G T A C G T C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A A C G T A C G T
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AAATGCCA---
--ATGCCAACC
 C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A A C G T A C G T A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AAATGCCA---
CGACCAACTGCCATGC
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AAATGCCA---
--ATGCCCACC
 C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A A C G T A C G T A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AAATGCCA
ANGNAAAGGTCA
 A C G T A C G T A C G T A C G T C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AAATGCCA
CCAACTGCCA
 A C G T A C G T C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AAATGCCA---
---TGCCAGCB
 C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAATGCCA
ARNTGACA
 C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAATGCCA
GGAAATTCCC
 A C G T A C G T C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAATGCCA--
CAAGATGGCGGC
 A C G T A C G T C G T A C T G A C G T A A G C T T C A G A G T C A G T C T G C A A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C