Information for 19-GTTTATTCCA (Motif 15)

T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A
Reverse Opposite:
C G A T C T A G C T A G G T C A C G T A A C G T C G T A C T G A C G T A A G T C
p-value:1e-12
log p-value:-2.906e+01
Information Content per bp:1.811
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif5.61%
Number of Background Sequences with motif1140.5
Percentage of Background Sequences with motif2.40%
Average Position of motif in Targets396.1 +/- 270.3bp
Average Position of motif in Background371.9 +/- 224.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATTCCA-
NTTTTATTGCNN
 A C G T T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A A C G T
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

CDX4/MA1473.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATTCCA
GTTTTATTGCC
 A C G T T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A
T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C

HOXD9/MA0913.2/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATTCCA
NTTTTATTGC-
 A C G T T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A
C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATTCCA
NTTTTATGAC-
 A C G T T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T

CDX1/MA0878.2/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATTCCA
GTTTTATGGCC
 A C G T T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A
T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATTCCA
NTTTTATTACN
 A C G T T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GTTTATTCCA
TATTGTTTATT---
 A C G T A C G T A C G T A C G T T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATTCCA---
NAATTTTATTACCNNN
 A C G T A C G T A C G T T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTTTATTCCA
---TTTTCCA
 T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTTTATTCCA--
--GCATTCCAGN
 T C A G C G A T A G C T C G A T C G T A A C G T A C G T G A T C A G T C G C T A A C G T A C G T
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G