Information for 21-CATCACGA (Motif 19)

A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A
Reverse Opposite:
A G C T A T G C A C T G A C G T C T A G G T C A C G A T T C A G
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.709
Number of Target Sequences with motif137.0
Percentage of Target Sequences with motif8.35%
Number of Background Sequences with motif2228.5
Percentage of Background Sequences with motif4.68%
Average Position of motif in Targets412.3 +/- 282.1bp
Average Position of motif in Background370.2 +/- 235.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CATCACGA---
NHRTCACGACDN
 A C G T A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A A C G T A C G T A C G T
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

TFE3/MA0831.2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CATCACGA-
-GTCACGTG
 A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A A C G T
A C G T T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G

MLX/MA0663.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CATCACGA---
-ATCACGTGAT
 A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A A C G T A C G T A C G T
A C G T C T G A G A C T G T A C C G T A G A T C A C T G A G C T C T A G T G C A G A C T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CATCACGA---
-ATCACGTGAC
 A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A A C G T A C G T A C G T
A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C

ZBED1/MA0749.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATCACGA----
CTATCGCGACATA
 A C G T A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A A C G T A C G T A C G T A C G T
G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATCACGA--
GGTCACGTGC
 A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A A C G T A C G T
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

MLXIPL/MA0664.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CATCACGA---
-ATCACGTGAT
 A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A A C G T A C G T A C G T
A C G T C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T

HOXA9/MA0594.2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATCACGA-
NNTTTACGAC
 A C G T A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A A C G T
A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C

PB0108.1_Atf1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATCACGA-----
GAATGACGAATAAC
 A C G T A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CATCACGA-
---CACGCA
 A G T C G C T A C A G T G A T C T G C A A G T C A T C G T C G A A C G T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A