Information for 2-KAACAGATGG (Motif 2)

A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T G T A C A C G T A C T G A G C T A G C T T G A C
p-value:1e-168
log p-value:-3.883e+02
Information Content per bp:1.816
Number of Target Sequences with motif648.0
Percentage of Target Sequences with motif39.49%
Number of Background Sequences with motif5886.3
Percentage of Background Sequences with motif12.37%
Average Position of motif in Targets380.0 +/- 216.9bp
Average Position of motif in Background374.1 +/- 226.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:1
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-KAACAGATGG--
GGAACAGATGGCA
 A C G T A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:KAACAGATGG---
GGACAGATGGCAG
 A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:KAACAGATGG-
-AACAGATGGT
 A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T
A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:KAACAGATGG-
-AACAGATGGC
 A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:KAACAGATGG-
-AACAKATGGY
 A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T
A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

HAND2/MA1638.1/Jaspar

Match Rank:6
Score:0.90
Offset:1
Orientation:forward strand
Alignment:KAACAGATGG-
-ACCAGATGGC
 A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T
A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:7
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:KAACAGATGG-
-DMCAGATGKS
 A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T
A C G T C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--KAACAGATGG-----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Ptf1a/MA1618.1/Jaspar

Match Rank:9
Score:0.85
Offset:0
Orientation:forward strand
Alignment:KAACAGATGG---
AAACAGATGTTTA
 A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:10
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:KAACAGATGG---
-AACAGATGGTCN
 A C T G T C G A T C G A A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G