Information for 4-CTATTTTTAG (Motif 3)

A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G
Reverse Opposite:
G T A C G A C T C G T A C G T A C T G A G C T A G C T A G C A T T G C A T A C G
p-value:1e-43
log p-value:-9.983e+01
Information Content per bp:1.654
Number of Target Sequences with motif355.0
Percentage of Target Sequences with motif21.63%
Number of Background Sequences with motif4745.4
Percentage of Background Sequences with motif9.97%
Average Position of motif in Targets411.7 +/- 246.5bp
Average Position of motif in Background364.8 +/- 222.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.4/Jaspar

Match Rank:1
Score:0.97
Offset:-3
Orientation:reverse strand
Alignment:---CTATTTTTAG--
NNTCTATTTTTAGNN
 A C G T A C G T A C G T A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAG-
TCTATTTATAGN
 A C G T A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAG-
KCTATTTTTRGH
 A C G T A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:CTATTTTTAG
CTATTTTTGG
 A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-CTATTTTTAG-
GCTATTTTTAGC
 A C G T A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTTTAG-
GCTATTTATAGC
 A C G T A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--CTATTTTTAG---
TTCTATTTTTAGNNN
 A C G T A C G T A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CTATTTTTAG-
GCTATTTTTGGM
 A C G T A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CTATTTTTAG
CCATATATGG
 A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTATTTTTAG
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C A T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C