Information for 4-ATTTRGCA (Motif 5)

C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C G A T C C G T A C T G A G T C A C G A T
p-value:1e-34
log p-value:-7.853e+01
Information Content per bp:1.787
Number of Target Sequences with motif668.0
Percentage of Target Sequences with motif40.71%
Number of Background Sequences with motif12709.1
Percentage of Background Sequences with motif26.70%
Average Position of motif in Targets406.4 +/- 275.1bp
Average Position of motif in Background367.0 +/- 231.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:ATTTRGCA--
NNTTGGCANN
 C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A A C G T A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ATTTRGCA--
-NTTGGCANN
 C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A A C G T A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:ATTTRGCA-
-CTTGGCAA
 C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A A C G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:ATTTRGCA-
GGTTGGCAT
 C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NFIC/MA0161.2/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ATTTRGCA--
TACTTGGCAGA
 A C G T C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A A C G T A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ATTTRGCA
VGCTGGCA
 C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATTTRGCA-
NGTGGGCAT
 C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTTRGCA
ARNTGACA
 C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATTTRGCA----
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

POU5F1/MA1115.1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTTRGCA---
NATTTGCATNN
 C G T A C A G T A G C T A C G T C T A G A C T G A G T C C G T A A C G T A C G T A C G T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T