Information for 9-YTNNCACAGM (Motif 7)

G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C
Reverse Opposite:
C A T G T A G C G C A T A T C G C G A T A C T G A G T C T C A G T C G A C T G A
p-value:1e-31
log p-value:-7.183e+01
Information Content per bp:1.437
Number of Target Sequences with motif947.0
Percentage of Target Sequences with motif57.71%
Number of Background Sequences with motif20602.5
Percentage of Background Sequences with motif43.28%
Average Position of motif in Targets397.7 +/- 262.8bp
Average Position of motif in Background368.1 +/- 230.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:YTNNCACAGM
----CACAGN
 G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:YTNNCACAGM------
-GAGCACAGCAGGACA
 G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:YTNNCACAGM
AAACCACAGC
 G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:YTNNCACAGM-
AAACCACAGAN
 G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-YTNNCACAGM-
NWAACCACADNN
 A C G T G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

ZNF341/MA1655.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:YTNNCACAGM---
-GGGAACAGCCAC
 G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C A C G T A C G T A C G T
A C G T C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-YTNNCACAGM
CCAGGAACAG-
 A C G T G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:YTNNCACAGM------
-CCACACAGCAGGAGA
 G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic2/MA1629.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:YTNNCACAGM------
--CTCACAGCAGGGGG
 G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

ZNF75D/MA1601.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-YTNNCACAGM
TTTCCCACAN-
 A C G T G A C T A G C T A G T C T C A G T G A C G C T A T A G C C G T A A T C G G T A C
G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T A C G T