Information for 8-TCCAATTGTT (Motif 12)

A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T
Reverse Opposite:
G C T A T G C A T G A C G C T A C G T A C A G T C G A T C A T G A T C G T G C A
p-value:1e-8
log p-value:-1.889e+01
Information Content per bp:1.668
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif14.99%
Number of Background Sequences with motif3073.3
Percentage of Background Sequences with motif6.27%
Average Position of motif in Targets311.8 +/- 211.0bp
Average Position of motif in Background336.5 +/- 196.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0065.1_Sox15_1/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--TCCAATTGTT-----
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.83
Offset:4
Orientation:forward strand
Alignment:TCCAATTGTT-
----ATTGTTA
 A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-TCCAATTGTT------
AATCAATTGTTCCGCTA
 A C G T A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.82
Offset:2
Orientation:forward strand
Alignment:TCCAATTGTT-
--CCATTGTTC
 A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T A C G T
A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TCCAATTGTT------
TTCAATTGTTCTAAAA
 A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TCCAATTGTT----
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.80
Offset:4
Orientation:forward strand
Alignment:TCCAATTGTT
----ATTGTT
 A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TCCAATTGTT---
NNATNAATTGTTTNN
 A C G T A C G T A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TCCAATTGTT------
CNNNTATTGTTCNNNNN
 A C G T A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

SOX8/MA0868.2/Jaspar

Match Rank:10
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TCCAATTGTT--
--CCATTGTTCT
 A C G T T A G C G T A C G C T A G T C A G C A T C G A T A C T G A C G T C G A T A C G T A C G T
A C G T A C G T A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T