Information for 8-TCTTTGTGAACA (Motif 13)

A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A
Reverse Opposite:
G A C T C T A G C A G T G C A T A T G C C T G A A T G C C T G A T G C A C T G A T A C G C G T A
p-value:1e-7
log p-value:-1.838e+01
Information Content per bp:1.732
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif9.22%
Number of Background Sequences with motif1404.8
Percentage of Background Sequences with motif2.86%
Average Position of motif in Targets387.8 +/- 394.9bp
Average Position of motif in Background334.0 +/- 208.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTGTGAACA
NNCTTTGTTNN--
 A C G T A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TCTTTGTGAACA
AGGVNCCTTTGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTTTGTGAACA
CCWTTGTYYB--
 A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTGTGAACA
NCCTTTGTTC---
 A C G T A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCTTTGTGAACA---
NCWRWGTAAACANSV
 A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCTTTGTGAACA--
--TATGTAAACANG
 A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A A C G T A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTGTGAACA----
NTNTATGTGCACATNNN
 A C G T A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0109.1_Bbx_2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTTTGTGAACA-----
TGATTGTTAACAGTTGG
 A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCTTTGTGAACA-
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTTTGTGAACA
CCWTTGTY----
 A C G T A T G C G A C T A C G T A G C T T A C G A G C T T A C G C G T A G T C A G A T C C T G A
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T