Information for 11-GGACTTGTGTCT (Motif 17)

A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C C G T A A G T C G T C A C G T A A C T G C G A T A G T C G T A C
p-value:1e-6
log p-value:-1.473e+01
Information Content per bp:1.917
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif38.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets182.5 +/- 126.7bp
Average Position of motif in Background355.0 +/- 230.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGACTTGTGTCT
-RTCATGTGAC-
 A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T
A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGACTTGTGTCT
TGACAGGTGTCA
 A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

TGIF2LY/MA1572.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGACTTGTGTCT
TGACAGCTGTCA
 A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T
G A C T T A C G C G T A G A T C C T G A A T C G T A G C G A C T C T A G G C A T A T G C C T G A

USF1/MA0093.3/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGACTTGTGTCT-
TGGTCATGTGACCT
 A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T
C A G T C T A G T C A G A G C T T A G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGACTTGTGTCT-------
--NNTNNTGTCTGGNNTNG
 A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

USF2/MA0526.3/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGACTTGTGTCT-
TGGTCATGTGACCT
 A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T
C A G T C T A G T C A G A G C T A T G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G C A T

TGIF2/MA0797.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGACTTGTGTCT
TGACAGCTGTCA
 A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

TGIF2LX/MA1571.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGACTTGTGTCT
TGACAGCTGTCA
 A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T
G A C T T A C G C G T A A G T C C T G A A T C G T A G C G A C T C T A G G C A T A T G C C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGACTTGTGTCT--
------CTGTCTGG
 A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GGACTTGTGTCT---
-------TGTCTAGA
 A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A