Information for 23-GATGACCACACA (Motif 27)

A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C G T A G T C
p-value:1e-1
log p-value:-4.265e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets554.8 +/- 86.7bp
Average Position of motif in Background311.5 +/- 184.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)8.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GATGACCACACA--
--AGACCACCCASR
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GATGACCACACA--
--GGACCACCCACG
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GATGACCACACA-
-NWAACCACADNN
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

GLI3/MA1491.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GATGACCACACA-----
--AGACCACCCACGTCG
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A C T G T G C A T G A C T G A C G T C A T A G C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

GLI2/MA0734.2/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GATGACCACACA-----
--AGACCACCCACGTCG
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A C T G T G C A A G T C A G T C G T C A A G T C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

JUN::JUNB(var.2)/MA1133.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GATGACCACACA
NATGACGTCACA
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A
T G C A T G C A G A C T C A T G G T C A G A T C T C A G G C A T G T A C C G T A A G T C T G C A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GATGACCACACA
GGGCGATGACCAYTC-
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GATGACCACACA
--AAACCACAGC
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GATGACCACACA
NGATGACGTCAT-
 A C G T A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GATGACCACACA-
--AAACCACAGAN
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C