Information for 5-TGACAGTGCATC (Motif 5)

A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
Reverse Opposite:
A T C G C G T A A G C T A C T G A G T C G T C A G T A C A C G T A C T G A G C T A G T C C G T A
p-value:1e-9
log p-value:-2.301e+01
Information Content per bp:1.890
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif31.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets244.5 +/- 149.1bp
Average Position of motif in Background323.0 +/- 195.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGACAGTGCATC
TTGACAG------
 A C G T A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGACAGTGCATC
TTGACAGG-----
 A C G T A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGACAGTGCATC
TTGACAGC-----
 A C G T A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGACAGTGCATC
VBTGWCAGCB----
 A C G T A C G T A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGACAGTGCATC
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGACAGTGCATC
RHTGWCAR------
 A C G T A C G T A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGACAGTGCATC
ARNTGACA-------
 A C G T A C G T A C G T A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGACAGTGCATC
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGACAGTGCATC
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGACAGTGCATC
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C C G T A A C T G A C G T A C T G G T A C C T G A A C G T A T G C
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T