Information for 6-AGGGCAAGGCAG (Motif 6)

C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A T G C A G T C G A C T C G A T A C T G A T G C A G T C G T A C A C G T
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.877
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif4.90%
Number of Background Sequences with motif309.0
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets375.4 +/- 209.2bp
Average Position of motif in Background335.0 +/- 219.9bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGGCAAGGCAG
DGGGYGKGGC--
 C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCAAGGCAG
TNNGGGCAG-----
 A C G T A C G T C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCAAGGCAG-
CAGGCCNNGGCCNN
 A C G T C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGGCAAGGCAG
AGGTCAAGGTCA
 C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAAGGCAG
ACATGCCCGGGCAT
 A C G T A C G T C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAAGGCAG
VDGGGYGGGGCY-
 A C G T C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G
T C A G C T A G C T A G A C T G A C T G G A T C A C T G A C T G C T A G C T A G A G T C G A T C A C G T

KLF3/MA1516.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGGCAAGGCAG
NGGGCGTGGTC-
 C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G
C G A T C T A G A C T G A C T G G A T C C A T G A G C T C T A G A T C G A G C T G A T C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGGCAAGGCAG
AAGGCAAGTGT-
 C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGGCAAGGCAG
GGGGCGGGGCCR
 C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G
C A T G C T A G A C T G A C T G G A T C C T A G C A T G C T A G T C A G G A T C G A T C T C A G

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGGCAAGGCAG
GGGGNGGGGC--
 C G T A C A T G A C T G A T C G G T A C C G T A C T G A A C T G A T C G A G T C C G T A A C T G
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T