Information for 7-CTGTGTAGATTT (Motif 9)

A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T
Reverse Opposite:
C T G A T G C A C G T A A C G T G T A C A C G T C G T A A G T C C G T A A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.881
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif70.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets505.6 +/- 327.1bp
Average Position of motif in Background337.6 +/- 234.8bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN29/MA1602.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGTAGATTT
NCNGTGTAGACG-
 A C G T A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTAGATTT
GCTGTG-------
 A C G T A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTGTGTAGATTT--
---TGTGGATTNNN
 A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxl2/MA1607.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGTAGATTT-
NNTGTTTACATANN
 A C G T A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T A C G T
A G C T C G A T C G A T C T A G G A C T C G A T C A G T G C T A G A T C G C T A G C A T G C T A G C A T G A C T

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGTGTAGATTT
-TGTCTAGA---
 A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGTAGATTT
CBTGTTTAYAWW-
 A C G T A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T

Foxf1/MA1606.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGTAGATTT
NNTGTTTACAN--
 A C G T A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T
G C A T G A C T C G A T T C A G G A C T C G A T C G A T G T C A A G T C G C T A G C A T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGTGTAGATTT
-TGTCTAGACG-
 A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGTAGATTT-
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGTGTAGATTT
NTGTTTAYATWW
 A G T C A C G T A C T G A C G T C T A G C G A T C G T A A C T G C G T A A C G T A C G T A G C T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A