Information for 10-CTCTGTCATT (Motif 12)


Reverse Opposite:

p-value:1e-6
log p-value:-1.432e+01
Information Content per bp:1.848
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif13.08%
Number of Background Sequences with motif1256.8
Percentage of Background Sequences with motif2.54%
Average Position of motif in Targets370.4 +/- 198.6bp
Average Position of motif in Background344.3 +/- 213.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGTCATT---
NNNCAGCTGTCAATATN

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTCTGTCATT
VGCTGWCAVB

MA0498.1_Meis1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTCTGTCATT-----
AGCTGTCACTCACCT

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTCTGTCATT---
-NCTGTCAATCAN

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTCTGTCATT
----GTCATN

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTCTGTCATT--
AAGCACCTGTCAATAT

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTCTGTCATT--
AATTACCTGTCAATAC

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTCTGTCATT--
AACGAGCTGTCAATAC

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTCATT
GGTCTGGCAT-

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTCTGTCATT--
AAAGACCTGTCAATCC