Information for 11-AACCAATATC (Motif 14)


Reverse Opposite:

p-value:1e-5
log p-value:-1.319e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.74%
Number of Background Sequences with motif39.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets129.2 +/- 185.5bp
Average Position of motif in Background327.8 +/- 173.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0002.1_Arid5a_1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AACCAATATC------
--CTAATATTGCTAAA

MA0087.1_Sox5/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AACCAATATC
NAACAAT---

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACCAATATC
ACTAGCCAATCA-

MA0042.1_FOXI1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AACCAATATC-
AAACAAACANNC

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACCAATATC
AACCGANA--

MA0084.1_SRY/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACCAATATC
GTAAACAAT---

PB0105.1_Arid3a_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACCAATATC------
-ACCCGTATCAAATTT

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACCAATATC
DGATCRATAN-

MA0041.1_Foxd3/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AACCAATATC-
AAACAAACATTC

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AACCAATATC
AGCCAATCGG