Information for 8-AATGGAAGGGCT (Motif 19)


Reverse Opposite:

p-value:1e-3
log p-value:-8.977e+00
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.67%
Number of Background Sequences with motif220.3
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets119.8 +/- 30.5bp
Average Position of motif in Background344.6 +/- 200.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AATGGAAGGGCT--
TATTATGGGATGGATAA

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AATGGAAGGGCT---
GTATTGGGTGGGTAATT

MF0001.1_ETS_class/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATGGAAGGGCT
ACCGGAAG----

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AATGGAAGGGCT
AAAGRGGAAGTG--

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AATGGAAGGGCT
---NGAAGC---

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AATGGAAGGGCT
AATGGAAAAT--

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AATGGAAGGGCT
AGAGGAAGTG--

MA0080.3_Spi1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AATGGAAGGGCT
AAAAAGAGGAAGTGA-

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AATGGAAGGGCT
ACAGGAAGTG--

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AATGGAAGGGCT--
------AGGCCTNG