Information for 10-TTGCTGAAGAGA (Motif 22)


Reverse Opposite:

p-value:1e-3
log p-value:-7.568e+00
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif21.50%
Number of Background Sequences with motif5111.7
Percentage of Background Sequences with motif10.32%
Average Position of motif in Targets358.6 +/- 221.0bp
Average Position of motif in Background335.5 +/- 211.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTGCTGAAGAGA
--GCTGACGC--

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGCTGAAGAGA
AAAWWTGCTGACWWD-

PB0041.1_Mafb_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTGCTGAAGAGA-
AAATTTGCTGACTTAGA

MA0496.1_MAFK/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTGCTGAAGAGA
AAANTGCTGACTNAG

MA0463.1_Bcl6/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGCTGAAGAGA-
TTTCCTAGAAAGCA

MA0495.1_MAFF/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTGCTGAAGAGA-
NAAAANTGCTGACTCAGC

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTGCTGAAGAGA---
---CGGAAGTGAAAC

MA0102.3_CEBPA/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTGCTGAAGAGA
ATTGCACAATA--

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTGCTGAAGAGA
-TGCTGACTCA-

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTGCTGAAGAGA
----NGAAGC--