Information for 7-TGTGAATAGT (Motif 9)


Reverse Opposite:

p-value:1e-7
log p-value:-1.820e+01
Information Content per bp:1.725
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif48.60%
Number of Background Sequences with motif11604.9
Percentage of Background Sequences with motif23.44%
Average Position of motif in Targets328.3 +/- 236.0bp
Average Position of motif in Background337.5 +/- 208.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAATAGT
CSTGGGAAAD--

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------TGTGAATAGT
GAAAAGGTGTGAAAATT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGTGAATAGT
AGGTGTTAAT---

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGTGAATAGT
-GTAAACAG-

PB0109.1_Bbx_2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGTGAATAGT---
TGATTGTTAACAGTTGG

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAATAGT
TATGTAAACANG

MA0047.2_Foxa2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGTGAATAGT
NCTAAGTAAACA--

MA0157.1_FOXO3/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTGAATAGT
TGTAAACA--

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTGAATAGT
AGGTGTGAAM---

MA0480.1_Foxo1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTGAATAGT-
TGTAAACAGGA