Information for 1-GTGTGGGHGG (Motif 1)


Reverse Opposite:

p-value:1e-164
log p-value:-3.794e+02
Information Content per bp:1.623
Number of Target Sequences with motif892.0
Percentage of Target Sequences with motif76.44%
Number of Background Sequences with motif17850.5
Percentage of Background Sequences with motif37.04%
Average Position of motif in Targets315.0 +/- 188.2bp
Average Position of motif in Background301.0 +/- 176.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.72
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGGHGG-
NGCGTGGGCGGR

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGGHGG---
GTGCGTGGGCGGGNG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGGHGG
TGCGTGGGYG-

MA0162.2_EGR1/Jaspar

Match Rank:4
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGGGHGG---
GGCGGGGGCGGGGG

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGGGHGG-
ANTGCGGGGGCGGN

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GTGTGGGHGG--
TGCGGAGTGGGACTGG

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGGGHGG----
NNNAAGGGGGCGGGNNN

MA0079.3_SP1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTGTGGGHGG---
--GGGGGCGGGGC

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTGTGGGHGG-----
-AGGGGGCGGGGCTG

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTGTGGGHGG---
-CGTGGGTGGTCC