Information for 14-GRATRTGY (Motif 11)


Reverse Opposite:

p-value:1e-16
log p-value:-3.685e+01
Information Content per bp:1.739
Number of Target Sequences with motif555.0
Percentage of Target Sequences with motif47.56%
Number of Background Sequences with motif17236.6
Percentage of Background Sequences with motif35.76%
Average Position of motif in Targets345.3 +/- 223.5bp
Average Position of motif in Background301.0 +/- 185.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GRATRTGY
ATGMATATDC

MA0090.1_TEAD1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GRATRTGY
CNGAGGAATGTG-

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------GRATRTGY--
NTTNTATGAATGTGNNC

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GRATRTGY-
AAGGATATNTN

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GRATRTGY-
ACAGGATGTGGT

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GRATRTGY
ACAGGAAGTG-

MA0136.1_ELF5/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GRATRTGY
AAGGAAGTA-

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GRATRTGY--
CTACTAGGATGTNNTN

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GRATRTGY
DCCGGAARYN-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GRATRTGY
CCWGGAATGY--