Information for 21-AATGCATT (Motif 18)


Reverse Opposite:

p-value:1e-11
log p-value:-2.738e+01
Information Content per bp:1.831
Number of Target Sequences with motif234.0
Percentage of Target Sequences with motif20.05%
Number of Background Sequences with motif6127.1
Percentage of Background Sequences with motif12.71%
Average Position of motif in Targets337.2 +/- 226.7bp
Average Position of motif in Background302.5 +/- 190.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.76
Offset:-6
Orientation:forward strand
Alignment:------AATGCATT---
AATCGCACTGCATTCCG

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AATGCATT-
GGGATTGCATNN

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AATGCATT----
NNNTATTGAATTGNNN

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AATGCATT-----
AAAATATGCATAATAAA

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AATGCATT--
ACTATGAATGAATGAT

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AATGCATT---
-ATGMATATDC

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATGCATT-
TAATCAATTA

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATGCATT--
ATTGCATCAK

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AATGCATT-
GAAAAAATTGCAAGG

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AATGCATT--
GGACTGAATTCATGCC