Information for 21-TTCCTTGCAA (Motif 19)


Reverse Opposite:

p-value:1e-11
log p-value:-2.535e+01
Information Content per bp:1.650
Number of Target Sequences with motif135.0
Percentage of Target Sequences with motif11.57%
Number of Background Sequences with motif3017.2
Percentage of Background Sequences with motif6.26%
Average Position of motif in Targets278.5 +/- 181.1bp
Average Position of motif in Background305.5 +/- 184.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0518.1_Stat4/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTCCTTGCAA
NNNTTTCCTGGAAA

MA0463.1_Bcl6/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTCCTTGCAA---
TTTCCTAGAAAGCA

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTCCTTGCAA--
NNNATTCCTCGAAAGN

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTTGCAA----
TTTCCTGGAAAGNNN

MA0137.3_STAT1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTTGCAA
TTTCCTGGAAA

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTCCTTGCAA
TTCCKNAGAA

MA0136.1_ELF5/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTCCTTGCAA
TACTTCCTT----

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCCTTGCAA
ANTTCTNNAGAA

MA0144.2_STAT3/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTTGCAA
TTTCCCAGAAN

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTTGCAA-
TTTCCNGGAAAN