Information for 22-AACGCGTCAG (Motif 20)


Reverse Opposite:

p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.849
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif117.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets338.6 +/- 227.3bp
Average Position of motif in Background290.2 +/- 213.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AACGCGTCAG-
---NCGTCAGC

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AACGCGTCAG--
--TGAGTCAGCA

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AACGCGTCAG--
NTTATTCGTCATNC

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AACGCGTCAG
---ACGTCA-

MA0476.1_FOS/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AACGCGTCAG-
NATGAGTCANN

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AACGCGTCAG---
CGCGCCGGGTCACGTA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AACGCGTCAG-
-----GTCATN

MA0462.1_BATF::JUN/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AACGCGTCAG
GAAATGACTCA-

POL002.1_INR/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AACGCGTCAG----
------TCAGTCTT

MA0018.2_CREB1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AACGCGTCAG
-TGACGTCA-