Information for 21-CCAGCACCCCTC (Motif 22)


Reverse Opposite:

p-value:1e-6
log p-value:-1.533e+01
Information Content per bp:1.968
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets291.0 +/- 135.9bp
Average Position of motif in Background281.1 +/- 165.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0097.1_Zfp281_1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCAGCACCCCTC
TCCCCCCCCCCCCCC

MA0057.1_MZF1_5-13/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCAGCACCCCTC-
---TTCCCCCTAC

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCAGCACCCCTC
ATTTCCCAGVAKSCY--

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCACCCCTC---
NNNNGGTACCCCCCANN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCAGCACCCCTC---
ATCCCCGCCCCTAAAA

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAGCACCCCTC----
TATCGACCCCCCACAG

PB0100.1_Zfp740_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAGCACCCCTC----
CCCCCCCCCCCACTTG

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCAGCACCCCTC--
GGTCCCGCCCCCTTCTC

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCAGCACCCCTC----
NNAGTCCCACTCNNNN

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCAGCACCCCTC
CNGTCACGCCAC