Information for 25-ACAGTATGGG (Motif 25)


Reverse Opposite:

p-value:1e-2
log p-value:-6.574e+00
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif34.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets219.7 +/- 133.5bp
Average Position of motif in Background276.9 +/- 195.3bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0057.1_MZF1_5-13/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACAGTATGGG---
---GGAGGGGGAA

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACAGTATGGG-
CCACACAGCAGGAGA

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACAGTATGGG-
GAGCACAGCAGGACA

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACAGTATGGG-
CACAGCAGGGGG

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACAGTATGGG-
CCACACAGCAGGAGA

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACAGTATGGG
GGTAAGTA----

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACAGTATGGG--
ACAGGATGTGGT

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTATGGG
CACAGN-----

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACAGTATGGG--------
-TATTATGGGATGGATAA

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACAGTATGGG----
NNTNNACAATGGGANNN