Information for 24-GTGTAAACCCAT (Motif 27)


Reverse Opposite:

p-value:1e-1
log p-value:-3.733e+00
Information Content per bp:1.968
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets223.8 +/- 127.7bp
Average Position of motif in Background173.0 +/- 76.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)8.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0157.1_FOXO3/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTGTAAACCCAT
-TGTAAACA---

MA0593.1_FOXP2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTGTAAACCCAT
AAGTAAACAAA-

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTAAACCCAT
NDGTAAACARRN

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTGTAAACCCAT
---TAATCCCN-

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGTAAACCCAT---
AAAGTAAACAAAAATT

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GTGTAAACCCAT
NNNVCTGWGYAAACASN-

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGTAAACCCAT
TATGTAAACANG-

MA0031.1_FOXD1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTGTAAACCCAT
--GTAAACAT--

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTGTAAACCCAT-
NNNNCTGTTAACNNTNN

MA0481.1_FOXP1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGTAAACCCAT
CAAAAGTAAACAAAG