Information for 4-KATTATGTAA (Motif 3)


Reverse Opposite:

p-value:1e-27
log p-value:-6.392e+01
Information Content per bp:1.806
Number of Target Sequences with motif182.0
Percentage of Target Sequences with motif15.60%
Number of Background Sequences with motif3066.8
Percentage of Background Sequences with motif6.36%
Average Position of motif in Targets342.4 +/- 201.2bp
Average Position of motif in Background297.9 +/- 191.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0025.1_NFIL3/Jaspar

Match Rank:1
Score:0.92
Offset:2
Orientation:forward strand
Alignment:KATTATGTAA---
--TTATGTAACAT

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:2
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:KATTATGTAA-
--TTATGCAAT

MA0102.3_CEBPA/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:KATTATGTAA-
NATTGTGCAAT

MA0043.1_HLF/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:KATTATGTAA--
NATTACGTAACC

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:KATTATGTAA-
-ATGATGCAAT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:KATTATGTAA-
-MTGATGCAAT

MA0466.1_CEBPB/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:KATTATGTAA--
-ATTGTGCAATA

MA0033.1_FOXL1/Jaspar

Match Rank:8
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:KATTATGTAA-
---TATGTNTA

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:KATTATGTAA--
--TTATGCAAAT

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--KATTATGTAA---
ANATTTTTGCAANTN