Information for 4-SAGCTSAGCTSA (Motif 5)


Reverse Opposite:

p-value:1e-23
log p-value:-5.487e+01
Information Content per bp:1.616
Number of Target Sequences with motif383.0
Percentage of Target Sequences with motif32.82%
Number of Background Sequences with motif9685.2
Percentage of Background Sequences with motif20.10%
Average Position of motif in Targets346.1 +/- 214.2bp
Average Position of motif in Background297.1 +/- 195.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.69
Offset:5
Orientation:forward strand
Alignment:SAGCTSAGCTSA
-----CAGCC--

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:SAGCTSAGCTSA
--NAHCAGCTGD

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:SAGCTSAGCTSA---
HWWGTCAGCAWWTTT

MA0496.1_MAFK/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-SAGCTSAGCTSA--
CTGAGTCAGCAATTT

MA0483.1_Gfi1b/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-SAGCTSAGCTSA
AAATCACAGCA--

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:SAGCTSAGCTSA
---CACAGN---

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:SAGCTSAGCTSA-
-----CAGCTGTT

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-SAGCTSAGCTSA
AAATCACTGC---

MA0495.1_MAFF/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--SAGCTSAGCTSA----
GCTGAGTCAGCAATTTTT

MA0048.1_NHLH1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SAGCTSAGCTSA--
--GCGCAGCTGCGT