Information for 6-ATGAGTCATH (Motif 6)


Reverse Opposite:

p-value:1e-22
log p-value:-5.083e+01
Information Content per bp:1.599
Number of Target Sequences with motif346.0
Percentage of Target Sequences with motif29.65%
Number of Background Sequences with motif8623.4
Percentage of Background Sequences with motif17.89%
Average Position of motif in Targets310.3 +/- 207.3bp
Average Position of motif in Background297.6 +/- 185.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0491.1_JUND/Jaspar

Match Rank:1
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGTCATH
NATGAGTCACN

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:ATGAGTCATH
ATGASTCATH

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:3
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-ATGAGTCATH-
DATGASTCATHN

MA0476.1_FOS/Jaspar

Match Rank:4
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGTCATH
NATGAGTCANN

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--ATGAGTCATH
NNATGAGTCATN

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:6
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--ATGAGTCATH
NNATGASTCATH

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGTCATH
GATGAGTCAT-

MA0490.1_JUNB/Jaspar

Match Rank:8
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:ATGAGTCATH-
ATGAGTCATCN

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-ATGAGTCATH-
NATGASTCABNN

PB0142.1_Jundm2_2/Jaspar

Match Rank:10
Score:0.95
Offset:-4
Orientation:forward strand
Alignment:----ATGAGTCATH--
ATTGATGAGTCACCAA