Information for 10-TGMMATTW (Motif 7)


Reverse Opposite:

p-value:1e-21
log p-value:-4.840e+01
Information Content per bp:1.744
Number of Target Sequences with motif434.0
Percentage of Target Sequences with motif37.19%
Number of Background Sequences with motif11855.1
Percentage of Background Sequences with motif24.60%
Average Position of motif in Targets323.3 +/- 209.3bp
Average Position of motif in Background297.6 +/- 187.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----TGMMATTW--
TTGAATGAAATTCGA

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGMMATTW----
CCTTGCAATTTTTNN

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGMMATTW--
NCNTTTGTTATTTNN

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGMMATTW
TTATGCAAAT-

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TGMMATTW---
TTGTATGCAAATTAGA

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TGMMATTW---
TTGTATGCAAATTAGA

MA0507.1_POU2F2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGMMATTW--
ATATGCAAATNNN

PH0063.1_Hoxb8/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGMMATTW-----
ACCGGCAATTAATAAA

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGMMATTW
ATATGCAAAT-

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGMMATTW-
AGATGCAATCCC