Information for 12-AAWTTTAG (Motif 8)


Reverse Opposite:

p-value:1e-19
log p-value:-4.422e+01
Information Content per bp:1.729
Number of Target Sequences with motif344.0
Percentage of Target Sequences with motif29.48%
Number of Background Sequences with motif8908.2
Percentage of Background Sequences with motif18.48%
Average Position of motif in Targets320.3 +/- 189.3bp
Average Position of motif in Background295.9 +/- 186.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AAWTTTAG---
NNNNTGAATTCANNNC

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAWTTTAG--
TATCATAATTAAGGA

MA0158.1_HOXA5/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAWTTTAG
AATTAGTG

PH0153.1_Prop1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AAWTTTAG----
CGAATTAATTAAGAAAC

MF0008.1_MADS_class/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAWTTTAG
CCATATATGG

PH0143.1_Pou2f1/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AAWTTTAG--
ATATATTAATTAAGTA

PH0175.1_Vax2/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AAWTTTAG--
GTGCACTAATTAAGAC

PH0011.1_Alx1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AAWTTTAG---
NNNAATTAATTAANGNG

MA0052.2_MEF2A/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AAWTTTAG--
NNGCTATTTTTAGCN

MA0075.1_Prrx2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAWTTTAG
TAATT---