Information for 10-TGCGGAGGTG (Motif 9)


Reverse Opposite:

p-value:1e-19
log p-value:-4.378e+01
Information Content per bp:1.687
Number of Target Sequences with motif199.0
Percentage of Target Sequences with motif17.05%
Number of Background Sequences with motif4198.4
Percentage of Background Sequences with motif8.71%
Average Position of motif in Targets308.9 +/- 180.6bp
Average Position of motif in Background301.8 +/- 182.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCGGAGGTG
TGCGTGGGYG

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGCGGAGGTG-------
-GCGGAGGTGTCGCCTC

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGAGGTG--
ANTGCGGGGGCGGN

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TGCGGAGGTG---
-----AGGTGTCA

MA0162.2_EGR1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCGGAGGTG----
GGCGGGGGCGGGGG

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCGGAGGTG
AGAGGAAGTG

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGCGGAGGTG--
--NNCAGGTGNN

MA0131.1_HINFP/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCGGAGGTG-
-GCGGACGTTN

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGCGGAGGTG---
NNTNNGGGGCGGNGNGN

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGCGGAGGTG-
TTAAGAGGAAGTTA