Information for 12-CTACTCCACA (Motif 10)


Reverse Opposite:

p-value:1e-8
log p-value:-1.912e+01
Information Content per bp:1.828
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif7.35%
Number of Background Sequences with motif974.1
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets315.0 +/- 209.5bp
Average Position of motif in Background310.9 +/- 188.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTACTCCACA--
SSAATCCACANN

MA0479.1_FOXH1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTACTCCACA
TCCAATCCACA

MA0130.1_ZNF354C/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CTACTCCACA
---ATCCAC-

PH0015.1_Crx/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTACTCCACA---
AGGCTAATCCCCAANG

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTACTCCACA---
-NWAACCACADNN

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTACTCCACA
GCTAATCC---

MA0002.2_RUNX1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTACTCCACA---
--AAACCACAGAN

MA0511.1_RUNX2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTACTCCACA------
-CAAACCACAAACCCC

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTACTCCACA---
NNTAATCCNGNCNN

MA0467.1_Crx/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTACTCCACA-
CTAATCCTCTT