Information for 7-CRCCGTTG (Motif 11)


Reverse Opposite:

p-value:1e-8
log p-value:-1.886e+01
Information Content per bp:1.812
Number of Target Sequences with motif137.0
Percentage of Target Sequences with motif35.96%
Number of Background Sequences with motif11290.3
Percentage of Background Sequences with motif22.94%
Average Position of motif in Targets330.3 +/- 223.9bp
Average Position of motif in Background312.0 +/- 190.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0131.1_Gmeb1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CRCCGTTG----
TNAACGACGTCGNCCA

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CRCCGTTG-
BRRCVGTTDN

MA0133.1_BRCA1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CRCCGTTG-
--GTGTTGN

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CRCCGTTG----
TTGAAAACCGTTAATTT

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CRCCGTTG----
ATGGAAACCGTTATTTT

MA0143.3_Sox2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CRCCGTTG--
--CCTTTGTT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CRCCGTTG
GGCVGTTR

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CRCCGTTG-
TGGCAGTTGG

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CRCCGTTG--
--CCWTTGTY

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CRCCGTTG--------
-NCCGTTGCTANGNGN