Information for 13-TGCTGACACTGC (Motif 12)


Reverse Opposite:

p-value:1e-7
log p-value:-1.701e+01
Information Content per bp:1.883
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif117.6
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets295.3 +/- 179.7bp
Average Position of motif in Background313.2 +/- 212.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGCTGACACTGC
TGCTGACTCA--

MA0495.1_MAFF/Jaspar

Match Rank:2
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------TGCTGACACTGC
NAAAANTGCTGACTCAGC

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGCTGACACTGC
TGCTGASTCAGC

MA0496.1_MAFK/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGACACTGC
AAANTGCTGACTNAG-

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TGCTGACACTGC
AAATTTGCTGACTTAGA

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGACACTGC
AAAWWTGCTGACWWD--

MA0117.1_Mafb/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGCTGACACTGC
-GCTGACGC---

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCTGACACTGC
VGCTGWCAVB--

MA0498.1_Meis1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCTGACACTGC---
AGCTGTCACTCACCT

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TGCTGACACTGC
TAAAAATGCTGACTT---