| p-value: | 1e-7 |
| log p-value: | -1.693e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 64.0 |
| Percentage of Target Sequences with motif | 16.80% |
| Number of Background Sequences with motif | 4052.8 |
| Percentage of Background Sequences with motif | 8.23% |
| Average Position of motif in Targets | 328.7 +/- 187.2bp |
| Average Position of motif in Background | 312.7 +/- 190.2bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.08 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 1 |
| Score: | 0.60
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---AATGGCTCTGTT
GTTAATGGCC----- |
|
|
|
POL004.1_CCAAT-box/Jaspar
| Match Rank: | 2 |
| Score: | 0.55
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AATGGCTCTGTT
TGATTGGCTANN-- |
|
|
|
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
| Match Rank: | 3 |
| Score: | 0.54
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | AATGGCTCTGTT--
----YCTTTGTTCC |
|
|
|
PB0135.1_Hoxa3_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.53
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----AATGGCTCTGTT
CCTTAATNGNTTTT-- |
|
|
|
POL010.1_DCE_S_III/Jaspar
| Match Rank: | 5 |
| Score: | 0.53
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | AATGGCTCTGTT
---NGCTN---- |
|
|
|
PB0071.1_Sox4_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.53
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AATGGCTCTGTT-----
TNNTCCTTTGTTCTNNT |
|
|
|
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
| Match Rank: | 7 |
| Score: | 0.52
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | AATGGCTCTGTT--
----CCWTTGTYYB |
|
|
|
MA0442.1_SOX10/Jaspar
| Match Rank: | 8 |
| Score: | 0.52
| | Offset: | 5
| | Orientation: | forward strand |
| Alignment: | AATGGCTCTGTT
-----CTTTGT- |
|
|
|
POL013.1_MED-1/Jaspar
| Match Rank: | 9 |
| Score: | 0.52
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | AATGGCTCTGTT
----GCTCCG-- |
|
|
|
PB0121.1_Foxj3_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.51
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | AATGGCTCTGTT--------
---NNCTTTGTTTTGNTNNN |
|
|
|
