Information for 17-CCAGTGCCTGGT (Motif 16)


Reverse Opposite:

p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.890
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif68.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets325.5 +/- 161.4bp
Average Position of motif in Background271.8 +/- 181.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------CCAGTGCCTGGT
NNNNTGCCAGTGATTG--

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCAGTGCCTGGT
-CTGTTCCTGG-

MA0473.1_ELF1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCAGTGCCTGGT--
-CACTTCCTGNTTC

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCAGTGCCTGGT
GGGGCCGAGGCCTG--

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTGCCTGGT
ACCACATCCTGT-

MA0098.2_Ets1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCAGTGCCTGGT--
CCCACTTCCTGTCTC

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCAGTGCCTGGT
---CTGTCTGG-

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CCAGTGCCTGGT
NNNANTGCAGTGCNNTT-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCAGTGCCTGGT
---TWGTCTGV-

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCAGTGCCTGGT
--ACTTCCTBGT