Information for 14-GCATTCTGAG (Motif 17)


Reverse Opposite:

p-value:1e-6
log p-value:-1.574e+01
Information Content per bp:1.693
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif11.81%
Number of Background Sequences with motif2482.7
Percentage of Background Sequences with motif5.04%
Average Position of motif in Targets327.6 +/- 218.5bp
Average Position of motif in Background312.2 +/- 194.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCATTCTGAG----
RGSMTBCTGGGAAAT

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCATTCTGAG-----
AAACATAATGAGGTTGC

MA0088.1_znf143/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCATTCTGAG-----
GCAAGGCATGATGGGAAATC

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCATTCTGAG---
NNTCCTGCTGTGNNN

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCATTCTGAG---
TCNCCTGCTGNGNNN

MA0078.1_Sox17/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCATTCTGAG
CTCATTGTC--

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCATTCTGAG--
GWAAYHTGABMC

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCATTCTGAG---
TNTCCTGCTGTGNNG

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCATTCTGAG--
NNNCCATTGTGTNAN

MA0442.1_SOX10/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCATTCTGAG
-CTTTGT---