Information for 17-GTATGTGTAT (Motif 23)


Reverse Opposite:

p-value:1e-1
log p-value:-4.263e+00
Information Content per bp:1.943
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.20%
Number of Background Sequences with motif1110.1
Percentage of Background Sequences with motif2.26%
Average Position of motif in Targets400.7 +/- 349.0bp
Average Position of motif in Background316.8 +/- 185.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)2.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0479.1_FOXH1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GTATGTGTAT----
---TGTGGATTNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTATGTGTAT---
-NNTGTGGATTSS

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTATGTGTAT---
TGTATATATATACC

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTATGTGTAT---
NNNNTTTGTTTACNNT

MA0033.1_FOXL1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTATGTGTAT
-TATGTNTA-

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTATGTGTAT-----
NNNTTTGTTTACNTTNN

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTATGTGTAT--
---TGTTTATTT

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTATGTGTAT
GHATATKCAT

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTATGTGTAT-----
NNGTATGTGCACATNNN

MA0040.1_Foxq1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTATGTGTAT-
TATTGTTTATT