| p-value: | 1e-10 |
| log p-value: | -2.512e+01 |
| Information Content per bp: | 1.762 |
| Number of Target Sequences with motif | 23.0 |
| Percentage of Target Sequences with motif | 6.04% |
| Number of Background Sequences with motif | 488.4 |
| Percentage of Background Sequences with motif | 0.99% |
| Average Position of motif in Targets | 298.4 +/- 233.4bp |
| Average Position of motif in Background | 312.8 +/- 185.3bp |
| Strand Bias (log2 ratio + to - strand density) | 0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0514.1_Sox3/Jaspar
| Match Rank: | 1 |
| Score: | 0.63
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | AGGGCTTTTGTC--
----CCTTTGTTTT |
|
|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
| Match Rank: | 2 |
| Score: | 0.61
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | AGGGCTTTTGTC
----CCWTTGTY |
|
|
|
PB0071.1_Sox4_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AGGGCTTTTGTC-----
TNNTCCTTTGTTCTNNT |
|
|
|
MA0143.3_Sox2/Jaspar
| Match Rank: | 4 |
| Score: | 0.57
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | AGGGCTTTTGTC
----CCTTTGTT |
|
|
|
PB0143.1_Klf7_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.57
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----AGGGCTTTTGTC-
NNNTNGGGCGTATNNTN |
|
|
|
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
| Match Rank: | 6 |
| Score: | 0.56
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | AGGGCTTTTGTC--
----CCATTGTTNY |
|
|
|
PB0134.1_Hnf4a_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.56
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----AGGGCTTTTGTC
NNATTGGACTTTNGNN |
|
|
|
PB0061.1_Sox11_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.55
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AGGGCTTTTGTC-----
NNNTCCTTTGTTCTNNN |
|
|
|
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 9 |
| Score: | 0.55
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --AGGGCTTTTGTC
CNAGGCCT------ |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | AGGGCTTTTGTC-
---NCCATTGTTC |
|
|
|
