Information for 9-TGCAACACTG (Motif 7)


Reverse Opposite:

p-value:1e-10
log p-value:-2.389e+01
Information Content per bp:1.638
Number of Target Sequences with motif193.0
Percentage of Target Sequences with motif50.66%
Number of Background Sequences with motif16891.7
Percentage of Background Sequences with motif34.32%
Average Position of motif in Targets344.4 +/- 213.6bp
Average Position of motif in Background312.8 +/- 193.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGCAACACTG
TTGCAACATN-

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCAACACTG-------
-CAATCACTGGCAGAAT

POL002.1_INR/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGCAACACTG-
---NNNANTGA

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCAACACTG-------
AATCGCACTGCATTCCG

MA0442.1_SOX10/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGCAACACTG
----ACAAAG

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCAACACTG----
NNNNTGAGCACTGTNNG

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCAACACTG-----
AATGAACAATGGAATT

MA0133.1_BRCA1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCAACACTG
-ACAACAC--

MA0078.1_Sox17/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGCAACACTG--
---GACAATGNN

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGCAACACTG-
-VRRACAAWGG